Query 006746
Match_columns 632
No_of_seqs 248 out of 1721
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 13:53:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006746.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006746hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02724 Molybdenum cofactor s 100.0 6.5E-65 1.4E-69 596.0 40.2 448 78-609 2-485 (805)
2 COG0520 csdA Selenocysteine ly 100.0 4.1E-62 8.9E-67 529.2 37.6 390 92-611 4-404 (405)
3 KOG2142 Molybdenum cofactor su 100.0 1.6E-55 3.4E-60 474.1 15.4 548 46-623 67-719 (728)
4 COG1104 NifS Cysteine sulfinat 100.0 4.2E-52 9.2E-57 437.3 31.8 369 109-612 2-377 (386)
5 PRK09295 bifunctional cysteine 100.0 3E-50 6.6E-55 439.4 39.1 387 92-610 4-402 (406)
6 PF00266 Aminotran_5: Aminotra 100.0 9.6E-50 2.1E-54 430.2 28.7 365 110-602 1-371 (371)
7 PLN02855 Bifunctional selenocy 100.0 8.4E-48 1.8E-52 422.6 39.2 389 96-612 17-418 (424)
8 TIGR03392 FeS_syn_CsdA cystein 100.0 2E-47 4.4E-52 415.9 39.3 387 92-612 2-395 (398)
9 PRK10874 cysteine sulfinate de 100.0 5.1E-47 1.1E-51 413.2 39.9 387 92-612 5-398 (401)
10 TIGR01979 sufS cysteine desulf 100.0 5.6E-45 1.2E-49 397.1 38.7 387 95-611 2-400 (403)
11 PLN02651 cysteine desulfurase 100.0 9.4E-46 2E-50 398.4 32.0 357 110-600 1-364 (364)
12 KOG1549 Cysteine desulfurase N 100.0 7.8E-46 1.7E-50 390.9 28.6 372 107-614 42-420 (428)
13 TIGR03402 FeS_nifS cysteine de 100.0 1.1E-44 2.4E-49 391.8 35.4 367 110-612 1-372 (379)
14 TIGR03403 nifS_epsilon cystein 100.0 3.4E-43 7.4E-48 380.7 35.8 367 110-612 1-375 (382)
15 TIGR02006 IscS cysteine desulf 100.0 1.2E-41 2.7E-46 371.3 35.7 367 107-612 2-377 (402)
16 TIGR01976 am_tr_V_VC1184 cyste 100.0 3.9E-41 8.4E-46 366.0 37.9 377 93-606 3-397 (397)
17 TIGR01814 kynureninase kynuren 100.0 4.7E-41 1E-45 367.2 36.8 384 91-611 8-406 (406)
18 PRK02948 cysteine desulfurase; 100.0 3.2E-39 6.9E-44 349.4 34.8 369 109-612 1-374 (381)
19 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.3E-38 2.8E-43 343.3 38.9 370 110-608 1-375 (376)
20 cd06453 SufS_like Cysteine des 100.0 1.7E-37 3.7E-42 334.4 35.5 367 110-606 1-373 (373)
21 PRK14012 cysteine desulfurase; 100.0 5.1E-37 1.1E-41 335.1 35.5 368 108-612 3-379 (404)
22 PRK03080 phosphoserine aminotr 100.0 1.5E-37 3.2E-42 336.7 28.5 360 101-611 6-372 (378)
23 TIGR03235 DNA_S_dndA cysteine 100.0 5.5E-36 1.2E-40 320.8 30.2 319 111-548 1-328 (353)
24 cd00611 PSAT_like Phosphoserin 100.0 7.5E-36 1.6E-40 320.7 23.3 337 114-609 4-353 (355)
25 PLN02409 serine--glyoxylate am 100.0 8.8E-34 1.9E-38 309.5 34.0 360 107-612 7-372 (401)
26 TIGR01364 serC_1 phosphoserine 100.0 4.3E-33 9.4E-38 298.4 27.1 304 169-611 36-347 (349)
27 PRK05355 3-phosphoserine/phosp 100.0 1.2E-32 2.6E-37 296.2 26.5 346 110-611 4-357 (360)
28 TIGR02326 transamin_PhnW 2-ami 100.0 4E-31 8.7E-36 284.3 33.4 324 169-611 34-361 (363)
29 cd06451 AGAT_like Alanine-glyo 100.0 1.7E-30 3.7E-35 278.2 33.8 348 114-611 4-356 (356)
30 TIGR01366 serC_3 phosphoserine 100.0 3.5E-31 7.7E-36 285.1 23.0 312 168-611 39-359 (361)
31 PTZ00094 serine hydroxymethylt 100.0 3.6E-30 7.8E-35 285.2 30.5 349 114-612 40-408 (452)
32 PRK13479 2-aminoethylphosphona 100.0 6.7E-29 1.5E-33 267.4 32.5 323 170-612 37-363 (368)
33 COG0075 Serine-pyruvate aminot 100.0 1.3E-28 2.7E-33 261.6 33.3 349 114-612 10-363 (383)
34 TIGR01788 Glu-decarb-GAD gluta 100.0 2E-27 4.4E-32 260.4 33.3 353 108-611 33-428 (431)
35 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 3.3E-27 7.1E-32 251.9 32.1 322 169-610 30-355 (355)
36 PRK02769 histidine decarboxyla 100.0 1.4E-25 3E-30 242.6 33.3 340 104-610 18-370 (380)
37 KOG2142 Molybdenum cofactor su 99.9 6.1E-29 1.3E-33 269.0 6.1 397 97-608 14-427 (728)
38 PRK13520 L-tyrosine decarboxyl 99.9 3.1E-25 6.7E-30 238.6 33.0 302 169-611 58-370 (371)
39 PLN02452 phosphoserine transam 99.9 3.4E-25 7.4E-30 238.1 28.0 347 109-611 7-362 (365)
40 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.4E-24 5.2E-29 234.2 35.0 218 108-358 19-242 (387)
41 PLN02414 glycine dehydrogenase 99.9 4.1E-25 8.9E-30 259.6 31.0 329 169-620 567-916 (993)
42 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.4E-24 5.1E-29 232.1 34.3 299 169-608 58-372 (373)
43 COG3844 Kynureninase [Amino ac 99.9 1.1E-24 2.3E-29 220.5 29.0 380 92-613 18-403 (407)
44 PLN02414 glycine dehydrogenase 99.9 1.2E-24 2.6E-29 255.6 30.0 353 101-608 94-465 (993)
45 KOG2862 Alanine-glyoxylate ami 99.9 7.4E-24 1.6E-28 213.1 30.0 325 169-612 49-382 (385)
46 cd00613 GDC-P Glycine cleavage 99.9 9.3E-24 2E-28 229.6 29.6 368 107-606 20-398 (398)
47 PRK05937 8-amino-7-oxononanoat 99.9 3E-23 6.5E-28 224.2 30.3 333 107-612 10-350 (370)
48 KOG3846 L-kynurenine hydrolase 99.9 4E-23 8.6E-28 207.1 27.8 383 107-612 66-461 (465)
49 cd06450 DOPA_deC_like DOPA dec 99.9 7.3E-24 1.6E-28 225.8 23.8 287 168-608 36-344 (345)
50 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.1E-21 2.3E-26 211.2 35.0 209 117-358 10-223 (361)
51 PLN03032 serine decarboxylase; 99.9 4.4E-22 9.5E-27 214.3 31.0 219 107-357 22-255 (374)
52 TIGR01437 selA_rel uncharacter 99.9 2.9E-22 6.4E-27 216.0 29.7 324 113-610 18-363 (363)
53 PRK05367 glycine dehydrogenase 99.9 2.5E-22 5.4E-27 237.1 30.7 358 101-607 67-437 (954)
54 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 4.8E-21 1E-25 207.1 35.4 211 117-359 17-231 (370)
55 PRK04366 glycine dehydrogenase 99.9 1.6E-21 3.5E-26 217.6 32.1 319 169-613 112-449 (481)
56 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.5E-22 1.2E-26 211.7 27.1 327 170-607 18-352 (352)
57 PRK00451 glycine dehydrogenase 99.9 6E-22 1.3E-26 219.3 27.8 327 169-610 111-446 (447)
58 cd06454 KBL_like KBL_like; thi 99.9 1E-20 2.2E-25 201.6 28.9 296 169-609 45-348 (349)
59 TIGR01822 2am3keto_CoA 2-amino 99.9 2.2E-20 4.7E-25 203.0 31.9 309 156-611 71-388 (393)
60 PRK07179 hypothetical protein; 99.9 1.5E-20 3.2E-25 205.8 29.5 290 171-612 100-398 (407)
61 TIGR01365 serC_2 phosphoserine 99.9 6.8E-21 1.5E-25 205.1 26.1 316 168-607 37-368 (374)
62 PRK00011 glyA serine hydroxyme 99.9 1.3E-20 2.7E-25 206.7 28.5 353 108-612 26-389 (416)
63 PRK12462 phosphoserine aminotr 99.9 2.8E-20 6.2E-25 198.6 29.0 347 111-611 6-361 (364)
64 PRK08064 cystathionine beta-ly 99.9 7.1E-21 1.5E-25 207.2 24.2 171 164-357 48-223 (390)
65 cd00378 SHMT Serine-glycine hy 99.9 2.5E-20 5.5E-25 203.1 27.6 351 114-614 25-387 (402)
66 PLN03226 serine hydroxymethylt 99.9 1.9E-19 4.2E-24 200.0 32.4 359 115-612 41-419 (475)
67 PRK08134 O-acetylhomoserine am 99.9 2.5E-19 5.5E-24 197.1 31.5 165 164-351 58-226 (433)
68 TIGR01329 cysta_beta_ly_E cyst 99.8 2.4E-20 5.1E-25 202.3 18.8 168 163-353 40-211 (378)
69 PRK13580 serine hydroxymethylt 99.8 6.7E-19 1.4E-23 193.3 28.6 342 114-612 55-445 (493)
70 PRK12566 glycine dehydrogenase 99.8 2.5E-19 5.5E-24 207.4 26.2 327 169-621 542-886 (954)
71 TIGR03588 PseC UDP-4-keto-6-de 99.8 8.1E-19 1.8E-23 190.3 28.8 342 170-610 29-380 (380)
72 PRK05367 glycine dehydrogenase 99.8 4.3E-18 9.3E-23 201.4 36.7 323 169-620 541-884 (954)
73 TIGR01141 hisC histidinol-phos 99.8 4.7E-19 1E-23 189.2 24.6 283 173-607 57-346 (346)
74 TIGR00858 bioF 8-amino-7-oxono 99.8 5E-18 1.1E-22 181.4 31.3 334 107-607 14-360 (360)
75 PLN02483 serine palmitoyltrans 99.8 5E-18 1.1E-22 189.9 31.3 303 169-613 145-467 (489)
76 PRK05958 8-amino-7-oxononanoat 99.8 8.1E-18 1.8E-22 181.7 32.1 336 107-610 37-385 (385)
77 PLN02721 threonine aldolase 99.8 1.6E-18 3.5E-23 185.1 25.4 300 172-612 42-352 (353)
78 cd00609 AAT_like Aspartate ami 99.8 1.2E-18 2.6E-23 184.4 24.1 294 173-607 39-349 (350)
79 PRK06225 aspartate aminotransf 99.8 4.2E-18 9E-23 184.6 27.5 169 172-358 68-248 (380)
80 TIGR03799 NOD_PanD_pyr putativ 99.8 7.6E-18 1.7E-22 188.7 29.1 259 168-516 127-439 (522)
81 PRK13034 serine hydroxymethylt 99.8 1.3E-17 2.9E-22 183.1 29.6 344 114-611 34-391 (416)
82 PRK05968 hypothetical protein; 99.8 1.4E-17 3E-22 181.3 27.9 171 164-357 57-231 (389)
83 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2.1E-17 4.5E-22 179.4 28.5 339 170-610 33-377 (379)
84 TIGR01825 gly_Cac_T_rel pyrido 99.8 4.6E-17 1E-21 176.3 30.8 295 169-612 77-381 (385)
85 PRK06939 2-amino-3-ketobutyrat 99.8 7.4E-17 1.6E-21 175.1 31.9 297 170-612 87-393 (397)
86 PLN02271 serine hydroxymethylt 99.8 8.8E-17 1.9E-21 177.4 32.4 367 114-611 154-539 (586)
87 PRK00950 histidinol-phosphate 99.8 6.5E-17 1.4E-21 173.7 29.4 166 173-355 72-243 (361)
88 TIGR01821 5aminolev_synth 5-am 99.8 7.6E-17 1.6E-21 176.2 30.2 297 170-612 90-396 (402)
89 PRK09105 putative aminotransfe 99.8 4.3E-17 9.3E-22 176.4 28.0 205 107-358 43-256 (370)
90 cd06502 TA_like Low-specificit 99.8 5.1E-18 1.1E-22 180.2 19.8 176 170-358 32-217 (338)
91 PLN02880 tyrosine decarboxylas 99.8 3.4E-17 7.3E-22 182.9 26.6 365 109-612 83-484 (490)
92 PRK09064 5-aminolevulinate syn 99.8 1.7E-16 3.7E-21 173.6 30.1 297 169-612 90-397 (407)
93 PRK08114 cystathionine beta-ly 99.8 9.1E-17 2E-21 174.3 27.0 169 164-354 56-230 (395)
94 PRK02731 histidinol-phosphate 99.8 9.1E-17 2E-21 173.1 26.7 287 173-612 70-366 (367)
95 PRK05613 O-acetylhomoserine am 99.8 1.4E-16 3E-21 175.4 28.5 168 164-351 63-232 (437)
96 cd00614 CGS_like CGS_like: Cys 99.8 1.4E-16 3E-21 172.3 27.3 172 164-357 34-210 (369)
97 PRK08133 O-succinylhomoserine 99.8 1.6E-17 3.5E-22 180.9 19.5 163 168-353 59-226 (390)
98 PRK13392 5-aminolevulinate syn 99.8 3.4E-16 7.4E-21 171.5 30.0 304 171-624 92-407 (410)
99 PRK13393 5-aminolevulinate syn 99.8 4.4E-16 9.5E-21 170.5 30.4 296 170-612 90-396 (406)
100 PRK06108 aspartate aminotransf 99.8 3.8E-16 8.3E-21 169.0 29.5 295 174-611 65-381 (382)
101 PRK07812 O-acetylhomoserine am 99.8 4.3E-16 9.3E-21 171.5 29.8 165 169-353 68-234 (436)
102 PRK04635 histidinol-phosphate 99.8 1.2E-16 2.5E-21 171.8 24.7 167 173-358 63-237 (354)
103 PRK07503 methionine gamma-lyas 99.8 4.9E-17 1.1E-21 177.8 21.2 168 169-357 64-234 (403)
104 PLN02822 serine palmitoyltrans 99.8 6.9E-16 1.5E-20 172.3 30.7 308 169-612 153-477 (481)
105 PRK05957 aspartate aminotransf 99.8 4.5E-16 9.7E-21 169.4 28.4 214 108-358 28-256 (389)
106 PRK07582 cystathionine gamma-l 99.7 4.3E-16 9.4E-21 168.3 27.8 156 170-351 51-210 (366)
107 TIGR01324 cysta_beta_ly_B cyst 99.7 2.8E-16 6.1E-21 170.2 25.5 166 170-357 50-219 (377)
108 TIGR00474 selA seryl-tRNA(sec) 99.7 6.9E-16 1.5E-20 170.3 28.6 214 107-359 80-310 (454)
109 PRK05387 histidinol-phosphate 99.7 4.9E-16 1.1E-20 166.4 26.8 203 107-357 24-232 (353)
110 PRK08248 O-acetylhomoserine am 99.7 1.2E-15 2.7E-20 167.9 30.3 161 169-352 63-227 (431)
111 PRK08861 cystathionine gamma-s 99.7 4.7E-16 1E-20 168.9 26.0 166 164-351 47-216 (388)
112 PRK07908 hypothetical protein; 99.7 5.2E-16 1.1E-20 166.3 26.0 282 173-612 61-347 (349)
113 PRK08361 aspartate aminotransf 99.7 5.7E-16 1.2E-20 168.6 26.3 167 174-357 74-259 (391)
114 cd00615 Orn_deC_like Ornithine 99.7 7.2E-17 1.6E-21 169.2 17.7 169 169-352 58-236 (294)
115 PRK05994 O-acetylhomoserine am 99.7 2.1E-15 4.6E-20 166.1 29.6 161 170-352 63-226 (427)
116 PRK04311 selenocysteine syntha 99.7 2.5E-15 5.5E-20 166.2 30.2 212 107-359 85-315 (464)
117 PRK05764 aspartate aminotransf 99.7 9.1E-16 2E-20 166.9 26.4 169 173-357 71-260 (393)
118 PRK08249 cystathionine gamma-s 99.7 5.4E-16 1.2E-20 169.3 24.6 154 164-338 58-213 (398)
119 TIGR02080 O_succ_thio_ly O-suc 99.7 5.7E-16 1.2E-20 168.2 24.7 161 169-351 50-214 (382)
120 PRK06767 methionine gamma-lyas 99.7 2.4E-16 5.3E-21 171.5 21.8 163 172-356 63-229 (386)
121 PRK04870 histidinol-phosphate 99.7 2E-15 4.3E-20 162.2 28.3 324 107-610 26-356 (356)
122 TIGR01328 met_gam_lyase methio 99.7 1.4E-15 3E-20 165.8 26.4 166 170-357 59-228 (391)
123 PRK03158 histidinol-phosphate 99.7 3.6E-15 7.9E-20 160.3 29.2 167 173-357 67-244 (359)
124 PRK06460 hypothetical protein; 99.7 5E-16 1.1E-20 168.4 22.2 173 162-356 37-213 (376)
125 PRK08574 cystathionine gamma-s 99.7 7E-16 1.5E-20 167.7 23.3 165 164-351 47-215 (385)
126 PLN02509 cystathionine beta-ly 99.7 2E-15 4.4E-20 167.0 25.9 167 164-353 127-297 (464)
127 PRK08056 threonine-phosphate d 99.7 2.9E-15 6.2E-20 161.2 26.3 162 172-350 57-227 (356)
128 cd01494 AAT_I Aspartate aminot 99.7 4.3E-16 9.3E-21 147.3 17.7 164 172-350 2-170 (170)
129 PRK14807 histidinol-phosphate 99.7 6.3E-15 1.4E-19 158.2 28.9 168 173-355 62-233 (351)
130 PRK08776 cystathionine gamma-s 99.7 1.3E-14 2.9E-19 158.7 31.8 161 169-351 59-223 (405)
131 PRK08045 cystathionine gamma-s 99.7 2.3E-15 5E-20 163.7 25.5 165 164-350 46-214 (386)
132 PRK05939 hypothetical protein; 99.7 2E-15 4.4E-20 164.7 24.9 166 164-351 41-208 (397)
133 PRK09028 cystathionine beta-ly 99.7 4E-15 8.6E-20 161.8 26.5 147 172-339 63-211 (394)
134 PRK07810 O-succinylhomoserine 99.7 3.5E-15 7.6E-20 163.2 26.0 161 171-354 71-236 (403)
135 PRK08960 hypothetical protein; 99.7 1E-14 2.2E-19 158.6 29.4 208 107-357 32-256 (387)
136 PRK07811 cystathionine gamma-s 99.7 3.3E-15 7.1E-20 162.7 25.2 162 169-352 60-225 (388)
137 PRK06084 O-acetylhomoserine am 99.7 9.7E-15 2.1E-19 160.7 28.9 161 170-351 58-220 (425)
138 TIGR01325 O_suc_HS_sulf O-succ 99.7 4.3E-15 9.2E-20 161.4 25.6 166 170-356 54-222 (380)
139 PRK07504 O-succinylhomoserine 99.7 1E-14 2.2E-19 159.4 28.2 201 100-350 24-226 (398)
140 PRK01688 histidinol-phosphate 99.7 2.6E-15 5.6E-20 161.3 23.0 167 173-358 60-236 (351)
141 PRK08363 alanine aminotransfer 99.7 8.5E-15 1.9E-19 159.8 27.4 162 173-349 73-251 (398)
142 PLN03026 histidinol-phosphate 99.7 1.1E-14 2.3E-19 158.3 27.4 168 173-356 89-261 (380)
143 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 3E-15 6.6E-20 164.5 22.8 161 169-352 56-220 (418)
144 TIGR02379 ECA_wecE TDP-4-keto- 99.7 2.8E-14 6E-19 154.8 29.6 169 170-360 31-206 (376)
145 cd00610 OAT_like Acetyl ornith 99.7 3.3E-14 7.2E-19 155.3 30.0 344 107-610 34-413 (413)
146 PRK08912 hypothetical protein; 99.7 1.6E-14 3.5E-19 157.0 27.2 170 174-357 67-254 (387)
147 PRK06234 methionine gamma-lyas 99.7 2.7E-14 5.9E-19 156.1 28.5 165 170-357 64-235 (400)
148 PLN03227 serine palmitoyltrans 99.7 3E-14 6.5E-19 155.4 28.4 322 163-612 38-382 (392)
149 PLN02590 probable tyrosine dec 99.7 1.5E-13 3.2E-18 154.4 33.7 242 83-352 102-371 (539)
150 PF01041 DegT_DnrJ_EryC1: DegT 99.7 4.4E-14 9.6E-19 152.5 28.6 331 169-607 24-363 (363)
151 PLN02263 serine decarboxylase 99.7 3.1E-13 6.7E-18 148.4 35.4 178 167-354 130-319 (470)
152 TIGR03540 DapC_direct LL-diami 99.7 3.1E-14 6.6E-19 154.5 27.1 170 174-357 71-259 (383)
153 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 5.3E-14 1.1E-18 152.6 28.7 337 170-610 31-374 (375)
154 PRK07682 hypothetical protein; 99.7 1.6E-14 3.5E-19 156.4 24.5 170 174-358 61-249 (378)
155 COG0399 WecE Predicted pyridox 99.7 3.1E-14 6.8E-19 152.1 25.9 326 169-611 33-372 (374)
156 PRK07681 aspartate aminotransf 99.7 2.8E-14 6.1E-19 155.8 25.9 169 174-357 73-261 (399)
157 PRK15407 lipopolysaccharide bi 99.6 1E-13 2.2E-18 153.2 30.4 165 170-355 63-239 (438)
158 PRK07568 aspartate aminotransf 99.6 1.1E-13 2.4E-18 150.8 30.2 202 108-350 31-250 (397)
159 PRK07324 transaminase; Validat 99.6 4.6E-14 1E-18 152.9 27.0 170 174-357 66-244 (373)
160 PRK07671 cystathionine beta-ly 99.6 5.3E-14 1.2E-18 152.6 27.4 165 164-351 44-212 (377)
161 PRK06176 cystathionine gamma-s 99.6 3.3E-14 7.2E-19 154.4 25.8 165 164-351 44-212 (380)
162 PLN02242 methionine gamma-lyas 99.6 2.4E-14 5.2E-19 157.2 24.9 172 164-357 70-246 (418)
163 PRK06434 cystathionine gamma-l 99.6 4.3E-14 9.2E-19 153.3 25.7 162 164-349 58-221 (384)
164 PRK07309 aromatic amino acid a 99.6 5.8E-14 1.3E-18 153.0 26.5 174 173-357 70-259 (391)
165 PRK03321 putative aminotransfe 99.6 3.5E-14 7.6E-19 152.2 23.9 170 172-358 59-239 (352)
166 PRK07337 aminotransferase; Val 99.6 9.7E-14 2.1E-18 150.9 27.6 208 107-357 30-254 (388)
167 PRK09276 LL-diaminopimelate am 99.6 7.2E-14 1.6E-18 151.7 25.8 170 173-357 72-261 (385)
168 TIGR03537 DapC succinyldiamino 99.6 5.1E-14 1.1E-18 151.1 24.2 166 174-355 40-226 (350)
169 PRK07050 cystathionine beta-ly 99.6 4.3E-14 9.2E-19 154.3 23.2 166 164-351 59-228 (394)
170 TIGR00461 gcvP glycine dehydro 99.6 2.3E-13 5E-18 159.2 30.5 176 169-363 529-719 (939)
171 PRK00854 rocD ornithine--oxo-a 99.6 4.3E-13 9.4E-18 146.5 31.1 290 170-611 83-400 (401)
172 PRK06702 O-acetylhomoserine am 99.6 7.2E-14 1.6E-18 153.4 24.9 161 170-350 61-223 (432)
173 PRK07550 hypothetical protein; 99.6 1.9E-13 4.1E-18 148.6 28.1 173 173-357 74-258 (386)
174 PRK05942 aspartate aminotransf 99.6 8.2E-14 1.8E-18 151.9 25.0 172 174-358 77-266 (394)
175 PRK05967 cystathionine beta-ly 99.6 6.9E-14 1.5E-18 152.0 24.1 168 164-352 58-228 (395)
176 PRK03244 argD acetylornithine 99.6 2.6E-13 5.6E-18 148.1 28.8 288 173-612 88-394 (398)
177 PRK06207 aspartate aminotransf 99.6 7.5E-13 1.6E-17 145.1 32.3 215 107-357 39-273 (405)
178 TIGR01140 L_thr_O3P_dcar L-thr 99.6 7.3E-14 1.6E-18 148.7 23.7 161 173-358 50-217 (330)
179 PRK07683 aminotransferase A; V 99.6 2E-13 4.4E-18 148.5 27.4 172 173-357 68-255 (387)
180 PRK07269 cystathionine gamma-s 99.6 8.9E-14 1.9E-18 150.2 23.6 163 164-351 48-214 (364)
181 PTZ00377 alanine aminotransfer 99.6 3.5E-13 7.6E-18 150.9 28.9 210 109-349 78-314 (481)
182 PRK07777 aminotransferase; Val 99.6 4.2E-13 9.2E-18 145.9 27.6 170 174-357 65-254 (387)
183 PRK04073 rocD ornithine--oxo-a 99.6 5.8E-13 1.3E-17 145.4 28.6 325 107-610 38-395 (396)
184 PRK06836 aspartate aminotransf 99.6 3.8E-13 8.2E-18 146.8 27.0 166 173-353 76-262 (394)
185 PRK07505 hypothetical protein; 99.6 8.5E-13 1.8E-17 144.4 29.5 201 107-349 44-262 (402)
186 COG1932 SerC Phosphoserine ami 99.6 2.4E-13 5.2E-18 141.6 23.6 303 169-611 49-362 (365)
187 PRK13238 tnaA tryptophanase/L- 99.6 5.8E-13 1.3E-17 147.9 28.1 174 172-359 80-283 (460)
188 TIGR00461 gcvP glycine dehydro 99.6 3.7E-13 8.1E-18 157.5 27.0 357 101-607 55-426 (939)
189 TIGR01265 tyr_nico_aTase tyros 99.6 1.1E-12 2.4E-17 143.6 28.8 164 173-350 76-256 (403)
190 PRK09265 aminotransferase AlaT 99.6 1.4E-12 3E-17 142.8 29.2 160 174-350 76-255 (404)
191 PLN00175 aminotransferase fami 99.6 1.4E-12 2.9E-17 143.4 28.8 171 174-357 95-281 (413)
192 PRK12414 putative aminotransfe 99.6 1.3E-12 2.8E-17 142.1 28.3 176 170-357 70-257 (384)
193 TIGR00707 argD acetylornithine 99.6 1.6E-12 3.4E-17 140.6 28.8 288 170-610 69-379 (379)
194 PRK05166 histidinol-phosphate 99.6 7.6E-13 1.7E-17 143.2 25.9 163 174-351 75-247 (371)
195 PRK13355 bifunctional HTH-doma 99.6 1.5E-12 3.2E-17 147.2 28.0 162 173-350 188-368 (517)
196 COG0076 GadB Glutamate decarbo 99.6 1.5E-12 3.2E-17 143.9 27.3 280 168-539 99-401 (460)
197 PRK04781 histidinol-phosphate 99.5 1.8E-12 4E-17 140.0 27.3 173 173-358 62-243 (364)
198 TIGR01264 tyr_amTase_E tyrosin 99.5 2.1E-12 4.5E-17 141.2 27.5 163 173-351 76-256 (401)
199 PTZ00125 ornithine aminotransf 99.5 4.7E-12 1E-16 138.1 29.8 337 107-612 29-395 (400)
200 PRK06107 aspartate aminotransf 99.5 1.8E-12 4E-17 141.8 26.4 174 170-357 74-263 (402)
201 PRK09082 methionine aminotrans 99.5 1.4E-12 3.1E-17 141.8 24.9 174 170-357 71-258 (386)
202 PRK06348 aspartate aminotransf 99.5 3.5E-12 7.6E-17 138.6 27.4 168 174-355 70-254 (384)
203 PRK08247 cystathionine gamma-s 99.5 1.5E-12 3.3E-17 140.8 24.1 163 164-349 46-211 (366)
204 PTZ00433 tyrosine aminotransfe 99.5 2.6E-12 5.7E-17 141.0 26.2 163 173-349 78-263 (412)
205 COG0156 BioF 7-keto-8-aminopel 99.5 5.8E-12 1.3E-16 135.7 27.4 304 159-609 75-387 (388)
206 PLN02187 rooty/superroot1 99.5 5.5E-12 1.2E-16 140.5 27.7 164 173-350 111-291 (462)
207 PLN02656 tyrosine transaminase 99.5 3.4E-12 7.3E-17 140.1 24.9 164 173-350 76-256 (409)
208 PLN00145 tyrosine/nicotianamin 99.5 1.1E-11 2.3E-16 137.0 28.9 164 173-350 97-277 (430)
209 PRK03317 histidinol-phosphate 99.5 3E-12 6.5E-17 138.3 23.8 169 173-357 68-250 (368)
210 PRK08153 histidinol-phosphate 99.5 7.4E-12 1.6E-16 135.5 26.5 167 173-357 70-245 (369)
211 PF00155 Aminotran_1_2: Aminot 99.5 1.8E-12 3.9E-17 139.1 21.4 297 172-606 46-363 (363)
212 PF00282 Pyridoxal_deC: Pyrido 99.5 7.4E-12 1.6E-16 135.6 25.7 216 109-353 40-279 (373)
213 PF01276 OKR_DC_1: Orn/Lys/Arg 99.5 1.6E-12 3.4E-17 140.9 20.1 283 169-539 65-398 (417)
214 PLN02376 1-aminocyclopropane-1 99.5 7E-12 1.5E-16 140.7 26.0 171 174-352 98-296 (496)
215 PF00464 SHMT: Serine hydroxym 99.5 5.2E-12 1.1E-16 136.4 23.9 351 115-606 27-399 (399)
216 TIGR03576 pyridox_MJ0158 pyrid 99.5 7.8E-12 1.7E-16 134.2 24.6 164 170-358 54-225 (346)
217 PRK10534 L-threonine aldolase; 99.5 9.4E-12 2E-16 132.4 24.8 174 170-357 34-217 (333)
218 TIGR01885 Orn_aminotrans ornit 99.5 5.1E-11 1.1E-15 130.3 30.9 297 170-611 79-401 (401)
219 PRK07049 methionine gamma-lyas 99.5 2.2E-12 4.7E-17 142.3 20.1 167 173-355 86-262 (427)
220 PRK06358 threonine-phosphate d 99.5 2.3E-11 5.1E-16 130.9 27.6 162 172-350 56-228 (354)
221 TIGR03531 selenium_SpcS O-phos 99.5 1.7E-11 3.7E-16 134.8 26.3 175 168-352 103-289 (444)
222 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 9.7E-12 2.1E-16 134.9 23.7 167 162-351 47-219 (386)
223 PRK01533 histidinol-phosphate 99.5 7.4E-12 1.6E-16 135.4 22.7 168 173-357 67-244 (366)
224 PRK03967 histidinol-phosphate 99.5 3.2E-11 6.8E-16 129.0 27.3 203 108-357 19-226 (337)
225 PRK08175 aminotransferase; Val 99.5 2.5E-11 5.5E-16 132.4 27.0 172 174-357 71-259 (395)
226 PRK06290 aspartate aminotransf 99.5 1.4E-11 3E-16 135.4 24.9 171 174-357 85-273 (410)
227 PLN02955 8-amino-7-oxononanoat 99.4 4.4E-11 9.6E-16 131.8 28.1 293 170-612 147-461 (476)
228 PRK01278 argD acetylornithine 99.4 7.1E-11 1.5E-15 128.6 29.6 208 107-357 29-265 (389)
229 PRK15481 transcriptional regul 99.4 7.3E-11 1.6E-15 130.3 29.8 167 173-357 124-303 (431)
230 TIGR03538 DapC_gpp succinyldia 99.4 2.5E-11 5.4E-16 132.4 25.4 169 174-355 68-264 (393)
231 PRK06425 histidinol-phosphate 99.4 4.3E-11 9.3E-16 127.6 26.5 167 172-358 42-216 (332)
232 COG1103 Archaea-specific pyrid 99.4 5.7E-11 1.2E-15 118.6 24.9 174 169-356 60-238 (382)
233 PLN02607 1-aminocyclopropane-1 99.4 2.4E-11 5.1E-16 134.8 24.9 170 174-350 99-294 (447)
234 COG2008 GLY1 Threonine aldolas 99.4 1.4E-11 3.1E-16 128.5 21.6 180 164-357 31-220 (342)
235 PLN00143 tyrosine/nicotianamin 99.4 4.5E-11 9.8E-16 131.2 26.3 163 174-350 78-257 (409)
236 PRK09148 aminotransferase; Val 99.4 5E-11 1.1E-15 130.7 26.4 172 174-357 72-260 (405)
237 PRK15029 arginine decarboxylas 99.4 9.3E-11 2E-15 135.7 29.2 174 169-352 204-402 (755)
238 PRK05964 adenosylmethionine--8 99.4 3.6E-11 7.8E-16 132.6 24.7 349 107-612 40-422 (423)
239 cd00617 Tnase_like Tryptophana 99.4 1.2E-10 2.6E-15 128.2 28.4 219 95-358 5-257 (431)
240 PRK02610 histidinol-phosphate 99.4 6.4E-11 1.4E-15 128.4 25.6 174 173-357 69-256 (374)
241 PRK07366 succinyldiaminopimela 99.4 5.5E-11 1.2E-15 129.3 24.8 171 174-357 72-261 (388)
242 PRK14809 histidinol-phosphate 99.4 6.6E-11 1.4E-15 127.3 24.8 170 173-357 68-244 (357)
243 COG2873 MET17 O-acetylhomoseri 99.4 4E-11 8.6E-16 124.8 21.7 164 171-354 63-227 (426)
244 COG0079 HisC Histidinol-phosph 99.4 1.4E-10 3.1E-15 124.7 26.7 170 172-359 59-236 (356)
245 PRK07392 threonine-phosphate d 99.4 1E-10 2.2E-15 126.1 25.6 168 173-357 60-238 (360)
246 PRK08636 aspartate aminotransf 99.4 1.7E-10 3.7E-15 126.3 27.6 176 174-355 75-268 (403)
247 PRK03715 argD acetylornithine 99.4 1.8E-10 3.8E-15 126.0 27.2 278 191-612 95-393 (395)
248 PLN02450 1-aminocyclopropane-1 99.4 2.5E-10 5.4E-15 127.5 28.5 172 174-352 90-289 (468)
249 PRK08068 transaminase; Reviewe 99.4 1.8E-10 3.8E-15 125.5 26.6 171 174-357 74-262 (389)
250 COG0436 Aspartate/tyrosine/aro 99.4 2.6E-10 5.7E-15 124.4 27.6 172 170-354 69-256 (393)
251 COG0112 GlyA Glycine/serine hy 99.4 2.3E-10 4.9E-15 120.4 25.8 340 115-612 33-390 (413)
252 TIGR03539 DapC_actino succinyl 99.4 1E-10 2.3E-15 125.9 23.4 156 174-355 60-237 (357)
253 PRK02627 acetylornithine amino 99.4 9.1E-10 2E-14 119.9 31.0 171 170-358 81-273 (396)
254 PRK04260 acetylornithine amino 99.3 3.5E-10 7.6E-15 122.6 26.5 170 174-357 70-255 (375)
255 PRK09147 succinyldiaminopimela 99.3 3.6E-10 7.7E-15 123.4 26.2 169 174-355 69-265 (396)
256 PRK07865 N-succinyldiaminopime 99.3 2.1E-10 4.5E-15 123.7 24.0 158 174-355 66-243 (364)
257 PLN02624 ornithine-delta-amino 99.3 7.8E-10 1.7E-14 123.7 28.9 343 107-616 73-448 (474)
258 COG1167 ARO8 Transcriptional r 99.3 1.7E-09 3.8E-14 120.4 31.2 175 170-357 136-320 (459)
259 PRK02936 argD acetylornithine 99.3 5.1E-10 1.1E-14 121.3 25.6 205 107-357 27-257 (377)
260 PRK13578 ornithine decarboxyla 99.3 9.3E-10 2E-14 126.4 27.8 173 169-353 173-372 (720)
261 PLN02231 alanine transaminase 99.3 1.8E-09 4E-14 122.2 28.6 132 173-309 171-312 (534)
262 PRK05664 threonine-phosphate d 99.3 2.4E-09 5.3E-14 114.1 28.0 157 173-357 52-214 (330)
263 PRK14808 histidinol-phosphate 99.3 1.6E-09 3.5E-14 115.8 25.6 160 173-357 59-224 (335)
264 TIGR02407 ectoine_ectB diamino 99.2 5E-09 1.1E-13 115.2 29.4 347 107-611 33-411 (412)
265 COG0626 MetC Cystathionine bet 99.2 3.4E-10 7.3E-15 122.0 19.6 158 172-349 65-224 (396)
266 PRK05839 hypothetical protein; 99.2 8.6E-10 1.9E-14 119.6 23.0 168 174-357 64-254 (374)
267 PRK15399 lysine decarboxylase 99.2 7.1E-09 1.5E-13 119.1 31.0 167 169-351 194-382 (713)
268 TIGR03811 tyr_de_CO2_Ent tyros 99.2 1.4E-08 3E-13 115.7 32.8 213 110-354 85-401 (608)
269 TIGR03542 DAPAT_plant LL-diami 99.2 1.6E-09 3.4E-14 118.6 24.1 163 173-354 78-265 (402)
270 PRK06855 aminotransferase; Val 99.2 5.2E-09 1.1E-13 115.8 27.9 165 174-350 77-258 (433)
271 PRK09264 diaminobutyrate--2-ox 99.2 1E-08 2.2E-13 113.2 30.2 349 107-612 37-416 (425)
272 PRK05093 argD bifunctional N-s 99.2 1.1E-08 2.3E-13 112.2 29.4 205 107-358 38-275 (403)
273 PRK09440 avtA valine--pyruvate 99.2 1.9E-09 4.1E-14 118.5 23.3 168 174-357 78-270 (416)
274 KOG1368 Threonine aldolase [Am 99.2 4.3E-10 9.3E-15 113.8 16.3 294 173-611 59-368 (384)
275 PRK15400 lysine decarboxylase 99.2 5.4E-09 1.2E-13 120.1 27.4 312 169-611 194-558 (714)
276 TIGR03246 arg_catab_astC succi 99.2 1.6E-08 3.4E-13 110.7 29.5 332 107-612 33-395 (397)
277 PRK06959 putative threonine-ph 99.2 1.5E-08 3.3E-13 108.5 26.6 161 173-358 56-221 (339)
278 PLN02672 methionine S-methyltr 99.1 4.8E-08 1E-12 116.8 32.2 177 170-357 734-933 (1082)
279 TIGR03372 putres_am_tran putre 99.1 3.3E-08 7.2E-13 109.5 28.8 340 106-610 72-442 (442)
280 PRK12381 bifunctional succinyl 99.1 3.1E-08 6.8E-13 108.7 28.2 332 107-612 37-399 (406)
281 PRK07590 L,L-diaminopimelate a 99.1 2.3E-08 5E-13 109.8 26.2 162 174-355 80-269 (409)
282 PRK11522 putrescine--2-oxoglut 99.1 6.5E-08 1.4E-12 107.8 29.6 341 107-612 80-451 (459)
283 COG0160 GabT 4-aminobutyrate a 99.1 9.4E-08 2E-12 104.6 29.4 351 107-612 54-445 (447)
284 PTZ00376 aspartate aminotransf 99.1 4E-08 8.7E-13 107.7 26.7 164 174-348 76-264 (404)
285 COG1921 SelA Selenocysteine sy 99.1 2.3E-09 5.1E-14 114.0 14.6 215 107-361 26-247 (395)
286 PRK08354 putative aminotransfe 99.0 1.5E-07 3.3E-12 99.4 28.3 148 173-349 43-196 (311)
287 PRK09257 aromatic amino acid a 99.0 4.8E-08 1E-12 106.7 25.1 166 174-349 73-260 (396)
288 KOG0053 Cystathionine beta-lya 99.0 5.5E-08 1.2E-12 104.2 23.7 147 172-339 79-227 (409)
289 PRK08360 4-aminobutyrate amino 99.0 2.9E-07 6.3E-12 102.2 30.6 349 107-612 39-426 (443)
290 TIGR02618 tyr_phenol_ly tyrosi 99.0 2.4E-08 5.3E-13 109.1 21.5 172 172-357 73-274 (450)
291 PRK05769 4-aminobutyrate amino 99.0 3.1E-07 6.8E-12 101.9 30.0 306 171-612 98-439 (441)
292 PRK13237 tyrosine phenol-lyase 99.0 3.1E-08 6.6E-13 108.6 20.2 166 173-352 81-275 (460)
293 PRK06058 4-aminobutyrate amino 99.0 4.3E-07 9.2E-12 101.0 29.7 347 107-611 54-441 (443)
294 COG0403 GcvP Glycine cleavage 99.0 3.4E-07 7.5E-12 97.5 27.0 370 87-609 57-447 (450)
295 PRK09221 beta alanine--pyruvat 99.0 1.8E-07 3.9E-12 103.9 25.8 352 107-612 47-443 (445)
296 PRK08637 hypothetical protein; 99.0 2.8E-07 6.1E-12 100.4 26.8 171 173-350 47-242 (388)
297 KOG1383 Glutamate decarboxylas 99.0 9.8E-08 2.1E-12 102.3 22.2 270 169-538 119-410 (491)
298 PRK08117 4-aminobutyrate amino 98.9 1.8E-07 3.8E-12 103.7 24.8 310 170-612 86-429 (433)
299 KOG2790 Phosphoserine aminotra 98.9 1.9E-07 4.2E-12 94.2 22.3 309 168-612 50-368 (370)
300 TIGR03801 asp_4_decarbox aspar 98.9 2.2E-07 4.7E-12 104.6 25.5 152 190-352 156-327 (521)
301 COG4992 ArgD Ornithine/acetylo 98.9 7.3E-07 1.6E-11 95.4 27.5 295 170-613 84-399 (404)
302 KOG2467 Glycine/serine hydroxy 98.9 3.3E-07 7.1E-12 95.5 23.9 351 115-610 47-424 (477)
303 PRK06541 hypothetical protein; 98.9 6.3E-07 1.4E-11 100.0 28.2 352 107-612 50-455 (460)
304 PRK04013 argD acetylornithine/ 98.9 7.8E-07 1.7E-11 96.2 28.0 201 107-353 22-247 (364)
305 TIGR00713 hemL glutamate-1-sem 98.9 4.2E-07 9.2E-12 100.2 26.3 213 107-358 46-285 (423)
306 PLN02760 4-aminobutyrate:pyruv 98.9 4.1E-07 8.9E-12 102.5 26.4 352 107-612 87-491 (504)
307 KOG1360 5-aminolevulinate synt 98.9 4.2E-07 9.1E-12 95.5 24.2 292 173-610 219-522 (570)
308 PRK13360 omega amino acid--pyr 98.9 7.2E-07 1.6E-11 99.0 28.0 351 107-611 44-439 (442)
309 COG1168 MalY Bifunctional PLP- 98.9 9E-07 2E-11 93.3 26.7 174 169-353 63-250 (388)
310 PRK06062 hypothetical protein; 98.9 1.1E-06 2.4E-11 97.9 28.9 220 107-358 51-306 (451)
311 COG1982 LdcC Arginine/lysine/o 98.9 6.7E-07 1.5E-11 99.5 26.5 167 170-351 70-247 (557)
312 PRK12566 glycine dehydrogenase 98.9 3E-07 6.6E-12 108.0 25.1 362 87-607 61-439 (954)
313 PRK06777 4-aminobutyrate amino 98.9 2.2E-06 4.8E-11 94.7 30.1 347 107-611 38-420 (421)
314 PF01212 Beta_elim_lyase: Beta 98.9 6.7E-09 1.4E-13 108.7 9.6 177 164-354 25-212 (290)
315 PLN02368 alanine transaminase 98.9 5.4E-07 1.2E-11 99.0 24.7 169 174-349 111-306 (407)
316 PRK09275 aspartate aminotransf 98.8 4.1E-07 8.9E-12 102.4 23.4 151 189-352 161-328 (527)
317 PRK07986 adenosylmethionine--8 98.8 1.5E-06 3.2E-11 96.2 27.1 347 107-612 41-423 (428)
318 PRK00062 glutamate-1-semialdeh 98.8 8.1E-07 1.8E-11 98.2 24.4 211 107-358 48-287 (426)
319 PRK09792 4-aminobutyrate trans 98.8 3.5E-06 7.6E-11 93.0 29.3 351 107-611 38-420 (421)
320 PRK07495 4-aminobutyrate amino 98.8 6.4E-06 1.4E-10 91.1 30.5 351 107-612 38-421 (425)
321 TIGR00700 GABAtrnsam 4-aminobu 98.8 6.9E-06 1.5E-10 90.7 30.4 350 107-611 31-419 (420)
322 PRK05965 hypothetical protein; 98.8 3.9E-06 8.4E-11 93.7 28.4 355 107-612 44-447 (459)
323 PLN00144 acetylornithine trans 98.8 3E-06 6.6E-11 92.3 26.8 288 173-612 60-380 (382)
324 PRK06105 aminotransferase; Pro 98.8 4.8E-06 1.1E-10 93.0 28.6 353 107-612 46-449 (460)
325 PRK07036 hypothetical protein; 98.8 2.2E-06 4.7E-11 95.9 25.6 362 107-621 49-464 (466)
326 PF03841 SelA: L-seryl-tRNA se 98.8 3.7E-09 8E-14 111.7 2.9 173 170-359 47-235 (367)
327 PRK00615 glutamate-1-semialdeh 98.7 2.5E-06 5.4E-11 94.4 25.4 214 107-358 51-291 (433)
328 PF02347 GDC-P: Glycine cleava 98.7 1.1E-06 2.4E-11 95.9 22.0 170 169-363 109-289 (429)
329 PRK08593 4-aminobutyrate amino 98.7 6.2E-06 1.4E-10 91.7 28.6 309 171-612 86-429 (445)
330 PRK04612 argD acetylornithine 98.7 4.5E-06 9.8E-11 91.8 26.9 333 107-612 38-403 (408)
331 KOG1359 Glycine C-acetyltransf 98.7 6.2E-07 1.3E-11 91.0 18.0 290 169-612 111-412 (417)
332 PRK06173 adenosylmethionine--8 98.7 3.9E-06 8.4E-11 92.9 26.0 308 171-613 88-426 (429)
333 PRK08088 4-aminobutyrate amino 98.7 9.9E-06 2.2E-10 89.6 29.2 309 174-612 88-423 (425)
334 PRK06082 4-aminobutyrate amino 98.7 5.4E-06 1.2E-10 92.6 26.9 345 107-612 70-451 (459)
335 PRK07482 hypothetical protein; 98.7 1.3E-05 2.8E-10 89.6 29.8 356 107-612 48-454 (461)
336 PRK07678 aminotransferase; Val 98.7 8E-06 1.7E-10 91.0 28.0 354 107-611 45-448 (451)
337 PRK05639 4-aminobutyrate amino 98.7 8E-06 1.7E-10 91.1 27.4 307 173-612 99-443 (457)
338 PRK12403 putative aminotransfe 98.7 6.3E-06 1.4E-10 92.1 26.5 222 107-357 52-313 (460)
339 PRK07480 putative aminotransfe 98.7 8.6E-06 1.9E-10 90.8 26.7 222 107-357 48-310 (456)
340 KOG1357 Serine palmitoyltransf 98.7 2.3E-06 5E-11 91.5 20.7 298 169-610 181-500 (519)
341 TIGR00508 bioA adenosylmethion 98.7 8E-06 1.7E-10 90.4 25.7 302 173-612 91-426 (427)
342 PRK06149 hypothetical protein; 98.6 1.4E-05 3.1E-10 96.9 29.9 309 171-612 625-970 (972)
343 PRK07481 hypothetical protein; 98.6 1.3E-05 2.8E-10 89.3 27.0 314 170-612 86-445 (449)
344 TIGR00699 GABAtrns_euk 4-amino 98.6 1.2E-05 2.6E-10 89.6 26.5 77 256-338 238-325 (464)
345 PRK06148 hypothetical protein; 98.6 1.6E-05 3.4E-10 96.8 29.5 349 107-612 622-1010(1013)
346 PRK06918 4-aminobutyrate amino 98.6 3.2E-05 7E-10 86.2 29.6 351 107-613 52-444 (451)
347 PRK06943 adenosylmethionine--8 98.6 1.8E-05 4E-10 88.1 27.6 352 107-614 52-448 (453)
348 COG1003 GcvP Glycine cleavage 98.6 1.6E-05 3.5E-10 85.0 24.7 318 169-612 108-447 (496)
349 PLN02397 aspartate transaminas 98.6 1.7E-05 3.6E-10 87.7 26.0 167 174-348 95-282 (423)
350 PRK05630 adenosylmethionine--8 98.6 1.3E-05 2.8E-10 88.6 24.7 343 107-612 38-420 (422)
351 KOG0628 Aromatic-L-amino-acid/ 98.6 3.6E-06 7.8E-11 90.3 18.7 270 221-612 189-471 (511)
352 TIGR00709 dat 2,4-diaminobutyr 98.5 6.9E-05 1.5E-09 83.4 29.4 351 107-612 37-435 (442)
353 PRK06938 diaminobutyrate--2-ox 98.5 5.5E-05 1.2E-09 84.6 28.5 354 107-616 61-463 (464)
354 KOG0256 1-aminocyclopropane-1- 98.5 1.1E-05 2.3E-10 85.6 21.2 174 174-353 125-321 (471)
355 PRK07483 hypothetical protein; 98.5 5.8E-05 1.2E-09 84.0 28.1 358 107-612 28-437 (443)
356 PRK06916 adenosylmethionine--8 98.5 2.7E-05 5.8E-10 87.1 25.5 351 107-612 54-455 (460)
357 PLN02482 glutamate-1-semialdeh 98.5 3.6E-05 7.9E-10 86.2 26.2 207 107-358 97-336 (474)
358 PRK06917 hypothetical protein; 98.5 0.00016 3.5E-09 80.5 31.0 358 107-612 29-437 (447)
359 KOG0257 Kynurenine aminotransf 98.5 2.2E-06 4.9E-11 91.2 15.2 171 169-351 72-261 (420)
360 TIGR03251 LAT_fam L-lysine 6-t 98.5 0.0001 2.2E-09 81.8 28.2 76 256-334 205-288 (431)
361 PRK07046 aminotransferase; Val 98.4 6.6E-05 1.4E-09 83.8 26.0 166 171-358 116-307 (453)
362 PRK12389 glutamate-1-semialdeh 98.4 0.0001 2.2E-09 81.7 27.2 169 173-358 96-290 (428)
363 PRK07030 adenosylmethionine--8 98.4 9.8E-05 2.1E-09 82.6 26.4 351 107-612 45-446 (466)
364 PRK06931 diaminobutyrate--2-ox 98.4 0.00016 3.6E-09 80.7 26.4 350 107-612 56-454 (459)
365 PRK08742 adenosylmethionine--8 98.4 0.00012 2.7E-09 81.9 25.3 180 173-357 110-328 (472)
366 PRK08297 L-lysine aminotransfe 98.3 0.00012 2.7E-09 81.4 24.6 102 453-611 337-440 (443)
367 PF12897 Aminotran_MocR: Alani 98.3 8.9E-05 1.9E-09 78.8 21.9 168 172-355 71-273 (425)
368 KOG0259 Tyrosine aminotransfer 98.2 1.5E-05 3.2E-10 83.9 13.0 124 174-309 107-240 (447)
369 KOG0634 Aromatic amino acid am 98.1 0.0018 3.8E-08 69.7 26.5 133 169-309 103-245 (472)
370 TIGR02617 tnaA_trp_ase tryptop 98.1 0.00019 4.1E-09 78.5 18.7 204 107-352 39-281 (467)
371 PRK06209 glutamate-1-semialdeh 98.1 0.0013 2.9E-08 72.9 25.8 207 107-355 46-270 (431)
372 PF00202 Aminotran_3: Aminotra 98.1 0.00011 2.3E-09 79.0 16.3 183 170-359 59-269 (339)
373 COG1448 TyrB Aspartate/tyrosin 98.0 0.00012 2.5E-09 77.7 15.7 203 109-350 34-261 (396)
374 COG0001 HemL Glutamate-1-semia 98.0 0.0016 3.6E-08 70.7 24.2 202 107-359 51-291 (432)
375 COG0161 BioA Adenosylmethionin 98.0 0.001 2.2E-08 73.1 22.1 309 173-613 90-444 (449)
376 PF05889 SLA_LP_auto_ag: Solub 98.0 3.3E-05 7.2E-10 82.7 10.2 200 111-338 6-236 (389)
377 KOG1402 Ornithine aminotransfe 97.9 0.0011 2.3E-08 69.1 18.4 173 169-359 100-300 (427)
378 KOG1404 Alanine-glyoxylate ami 97.9 0.00078 1.7E-08 71.5 17.8 302 173-606 95-432 (442)
379 KOG0629 Glutamate decarboxylas 97.7 0.00022 4.8E-09 76.2 11.4 174 173-353 144-338 (510)
380 KOG2040 Glycine dehydrogenase 97.7 0.00032 6.8E-09 78.1 12.2 361 87-607 100-478 (1001)
381 KOG0633 Histidinol phosphate a 97.6 0.004 8.7E-08 62.9 17.7 138 191-339 88-231 (375)
382 COG3977 Alanine-alpha-ketoisov 97.6 0.013 2.7E-07 60.6 21.1 186 170-368 78-279 (417)
383 PF06838 Met_gamma_lyase: Meth 97.6 0.0015 3.2E-08 69.3 14.6 166 174-356 58-244 (403)
384 KOG2040 Glycine dehydrogenase 97.4 0.03 6.5E-07 63.0 23.1 171 169-357 581-769 (1001)
385 PLN02974 adenosylmethionine-8- 97.4 0.0081 1.8E-07 71.4 18.8 230 257-610 567-816 (817)
386 KOG1401 Acetylornithine aminot 97.0 0.34 7.4E-06 52.3 24.1 175 174-360 102-299 (433)
387 KOG1412 Aspartate aminotransfe 96.9 0.055 1.2E-06 56.2 17.4 142 195-349 105-267 (410)
388 COG4100 Cystathionine beta-lya 96.8 0.015 3.3E-07 59.9 12.5 148 176-338 71-236 (416)
389 KOG1358 Serine palmitoyltransf 96.8 0.2 4.3E-06 53.7 20.3 149 174-338 143-307 (467)
390 KOG0258 Alanine aminotransfera 96.6 0.016 3.5E-07 61.7 10.8 130 172-309 115-256 (475)
391 COG3033 TnaA Tryptophanase [Am 96.3 0.24 5.3E-06 52.6 17.6 203 107-353 44-284 (471)
392 KOG1403 Predicted alanine-glyo 92.8 5.3 0.00012 41.8 15.9 350 104-611 42-436 (452)
393 KOG1405 4-aminobutyrate aminot 92.7 5.4 0.00012 42.7 16.2 77 255-332 254-341 (484)
394 PLN02994 1-aminocyclopropane-1 85.0 2.2 4.8E-05 40.5 6.2 45 173-220 99-147 (153)
395 KOG1411 Aspartate aminotransfe 73.7 66 0.0014 34.7 13.0 147 191-349 120-287 (427)
396 PF04864 Alliinase_C: Allinase 66.2 35 0.00075 36.7 9.2 163 169-354 46-213 (363)
397 PF02310 B12-binding: B12 bind 60.8 70 0.0015 28.1 9.2 78 221-310 10-90 (121)
398 PF10518 TAT_signal: TAT (twin 59.4 4.4 9.6E-05 26.5 0.8 12 45-56 2-13 (26)
399 cd02067 B12-binding B12 bindin 43.7 1.3E+02 0.0029 26.5 8.1 97 221-332 9-109 (119)
400 COG1184 GCD2 Translation initi 41.4 3.4E+02 0.0073 28.8 11.6 77 169-246 99-177 (301)
401 cd02070 corrinoid_protein_B12- 38.6 2.5E+02 0.0055 27.6 9.9 96 221-333 92-192 (201)
402 PRK00955 hypothetical protein; 38.1 1.9E+02 0.0041 33.9 10.0 89 209-308 9-130 (620)
403 PF10399 UCR_Fe-S_N: Ubiquitin 36.6 12 0.00026 27.4 0.1 18 41-58 5-22 (41)
404 PF15608 PELOTA_1: PELOTA RNA 34.8 2.1E+02 0.0046 25.2 7.5 65 174-247 23-88 (100)
405 PRK02261 methylaspartate mutas 32.5 3E+02 0.0064 25.5 8.7 77 221-309 13-93 (137)
406 TIGR02370 pyl_corrinoid methyl 30.6 4.6E+02 0.0099 25.7 10.2 96 221-333 94-194 (197)
407 TIGR01409 TAT_signal_seq Tat ( 27.3 30 0.00064 23.2 0.8 11 46-56 2-12 (29)
408 TIGR01501 MthylAspMutase methy 26.0 3.6E+02 0.0078 25.0 8.0 77 221-309 11-91 (134)
409 TIGR02811 formate_TAT formate 24.7 33 0.00071 27.8 0.7 11 44-54 8-18 (66)
410 cd02069 methionine_synthase_B1 24.0 5.1E+02 0.011 25.8 9.3 101 222-334 99-203 (213)
411 COG0552 FtsY Signal recognitio 23.3 8.8E+02 0.019 26.2 11.2 106 197-309 151-268 (340)
412 COG5016 Pyruvate/oxaloacetate 23.1 2.3E+02 0.0051 31.3 6.9 91 214-312 86-182 (472)
413 PF05368 NmrA: NmrA-like famil 23.0 3.1E+02 0.0068 27.0 7.7 60 235-306 40-99 (233)
414 smart00857 Resolvase Resolvase 22.7 4E+02 0.0087 24.1 7.8 77 228-306 21-100 (148)
415 PRK08535 translation initiatio 22.4 4.7E+02 0.01 27.7 9.2 55 191-247 122-179 (310)
416 TIGR00511 ribulose_e2b2 ribose 22.0 4.4E+02 0.0096 27.8 8.8 72 172-247 98-174 (301)
417 PF00128 Alpha-amylase: Alpha 21.4 71 0.0015 32.6 2.7 62 233-309 11-73 (316)
418 COG1066 Sms Predicted ATP-depe 21.1 4.8E+02 0.01 29.1 8.8 128 216-354 122-275 (456)
419 cd02065 B12-binding_like B12 b 21.1 5.5E+02 0.012 22.3 9.5 80 221-312 9-91 (125)
420 smart00642 Aamy Alpha-amylase 20.9 77 0.0017 30.4 2.6 35 275-309 56-91 (166)
421 KOG0025 Zn2+-binding dehydroge 20.8 3.2E+02 0.0068 29.1 7.0 71 190-265 137-207 (354)
No 1
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=6.5e-65 Score=596.00 Aligned_cols=448 Identities=24% Similarity=0.377 Sum_probs=349.6
Q ss_pred HHHHHhCC-CCCC---chhHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHh-cCCCCCCCCCCCCCCCCcccccc
Q 006746 78 TEFTKAYP-QYFD---TYQIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQE-SSPSHLRPSLPSQNLDIPFFSVS 152 (632)
Q Consensus 78 ~~F~~~~p-~y~~---~~~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~-~~~~~~~~~~P~~~~~~p~f~~~ 152 (632)
.+|+..|. .|++ ...++.+|+.+||.| ++.+||||+|+++++..+++++. .++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~R~~~fp~l--~~~iYLD~Aatt~~~~~~V~~~~~~~~~~------------------ 61 (805)
T PLN02724 2 ESFLKEFGGYYGYPDGPKPIDELRATEFARL--KGVVYLDHAGATLYSESQLEAALADFSSN------------------ 61 (805)
T ss_pred hhHHhhhcccCCcccchhhHHHHHHHHhhhc--CCCEeEeCCCCCCCCHHHHHHHHHHHHhh------------------
Confidence 46777773 3454 345999998889999 67999999999999887777653 33221
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHH
Q 006746 153 YKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMI 232 (632)
Q Consensus 153 ~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~ 232 (632)
..+||++.+..+....+.++++|++|+++||+++++|+||||+|+|+|+++++++++|++||+|++..++|++.+.| +
T Consensus 62 -~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~-~ 139 (805)
T PLN02724 62 -VYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGI-R 139 (805)
T ss_pred -ccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHH-H
Confidence 12677765444555678999999999999999888788999999999999999999999999987665444445555 5
Q ss_pred HHHHhcCCEEEEEeccC-------CccccCH--HHHHHHHHh----cCcCCCceeEEEEeccCCCCccccchHHHHHHhh
Q 006746 233 RTSEKRGARVMSAEFSW-------PRLRINS--EKLRKMVVS----KGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQE 299 (632)
Q Consensus 233 ~~a~~~G~~v~~v~~~~-------~~~~i~~--~~l~~~i~~----~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~ 299 (632)
+.++++|++|++++++. ..+.++. ++|++.++. .....++++||+++|+||+||.++|+++++++++
T Consensus 140 ~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~ 219 (805)
T PLN02724 140 EYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKD 219 (805)
T ss_pred HHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHH
Confidence 77889999999998762 1233432 556665421 0001235689999999999999999995555554
Q ss_pred C---------CcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCC-Cceeec
Q 006746 300 N---------DWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLL 369 (632)
Q Consensus 300 ~---------g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~ 369 (632)
. +|+++|||||++|+ .++|++++++||+++|+|||||+ |.|+|+||||+++++.|+|.++| |++...
T Consensus 220 ~~~~~~~~~g~~~v~vDaaQ~~g~--~piDv~~~~~Dfl~~S~HK~~Gg-P~G~G~L~vr~~~~~~l~p~~~GGg~~~~~ 296 (805)
T PLN02724 220 NQHSNFSKSGRWMVLLDAAKGCGT--SPPDLSRYPADFVVVSFYKIFGY-PTGLGALLVRRDAAKLLKKKYFGGGTVAAS 296 (805)
T ss_pred hcccccccCcceEEEeehhhhcCC--CCCChhhcCCCEEEEecceeccC-CCCceEEEEehhhhhhhcCCccCCCceEEE
Confidence 2 48999999999999 79999999999999999999997 99999999999998889998887 565321
Q ss_pred ccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCch
Q 006746 370 PAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSE 449 (632)
Q Consensus 370 ~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 449 (632)
.....+..... ..+.+ +| .||+|++.|.++.
T Consensus 297 ~~~~~~~~~~~---------~~~~r---fE----------------~GT~n~~~i~~l~--------------------- 327 (805)
T PLN02724 297 IADIDFVKRRE---------RVEQR---FE----------------DGTISFLSIAALR--------------------- 327 (805)
T ss_pred ecccceeeccc---------cHHHH---hc----------------CCCcchhHHHHHH---------------------
Confidence 11000000000 00012 23 5666667777787
Q ss_pred hhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCC----CCCCCcEEEEEEccCCCCccCHH
Q 006746 450 IECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI----RFDRGPALAFNVFDWKREKIEPV 525 (632)
Q Consensus 450 ~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~----~~~rg~ivaFnv~~~~G~~i~~~ 525 (632)
+||++++++|+++|.+|++.|+++|++.|.+++|.| |.|+|+|||+.. ...|++||+||+.+.+|+.+++.
T Consensus 328 ---aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~--g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~ 402 (805)
T PLN02724 328 ---HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGN--GAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHR 402 (805)
T ss_pred ---HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCC--CCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHH
Confidence 999999999999999999999999999999999988 889999999851 24689999999999999999999
Q ss_pred HHHHHHHhCCcEEccCccCChHHHhHHHHh----hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHH
Q 006746 526 LVQKLADRENISLSYGSLHHIWFSDKYQKE----KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYR 601 (632)
Q Consensus 526 ~V~kla~~~gI~lr~G~~c~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~r 601 (632)
.|.++++.+||.+|+||+|+++.++.+++. ..+..+++..|++..+.. +....|+||||||+|||+|||++
T Consensus 403 ~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~-----~~~~~G~vRvS~g~ynt~eDvd~ 477 (805)
T PLN02724 403 EVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVI-----HGRPTGAVRVSFGYMSTFEDCQK 477 (805)
T ss_pred HHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhhee-----cCcccceEEEEcCccCCHHHHHH
Confidence 999999999999999999999999876542 445566778887644322 12235899999999999999999
Q ss_pred HHHHHHHh
Q 006746 602 LWAFVAQF 609 (632)
Q Consensus 602 lv~~l~~~ 609 (632)
|+++|+++
T Consensus 478 lv~~l~~~ 485 (805)
T PLN02724 478 FIDFIISS 485 (805)
T ss_pred HHHHHHHH
Confidence 99999985
No 2
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-62 Score=529.17 Aligned_cols=390 Identities=23% Similarity=0.283 Sum_probs=328.0
Q ss_pred hHHHHHHhhccCcCCC---CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccccc-ccccc
Q 006746 92 QIDQIRAKEYYQLSLS---NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL-LHGGQ 167 (632)
Q Consensus 92 ~~d~iR~~ef~~L~~~---~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~-~~g~~ 167 (632)
++..+|+ +||.|... +.+|||++++++.|..|++++..+.... .+|.+... ..+.+
T Consensus 4 ~~~~~r~-~fp~l~~~~~~~~vylD~aa~~~~p~~V~~a~~~~~~~~-------------------~an~~r~~~~~~~~ 63 (405)
T COG0520 4 DVAAVRA-DFPALKREVGKPLVYLDNAATSQKPQAVLDAVAEYYRRY-------------------NANVHRGAHTLAEE 63 (405)
T ss_pred ChHHHHh-hCHHHhhccCCCeEEecCcccccCCHHHHHHHHHHHHhh-------------------cCCcCcccchHHHH
Confidence 4556776 58888521 3689999999999999999987654321 14444222 22444
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--CCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEE
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--FMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
..+.++++|+.+++++|+++ ..+|+||+|+|+|+|+++.++. +++||+|+ +.+|||||.++| .+.+++.|++|++
T Consensus 64 ~t~~~e~aRe~va~~~~a~~-~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw-~~~~~~~Ga~v~~ 141 (405)
T COG0520 64 ATDLYEAAREAVARFLNADS-SDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPW-QELAKRTGAKVRV 141 (405)
T ss_pred HHHHHHHHHHHHHHHhCCCC-CCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHH-HHHHHhcCcEEEE
Confidence 57899999999999999996 2389999999999999999997 89999965 678999999999 5678889999999
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCC
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSL 323 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~ 323 (632)
+|++ +++.++.+++++.++++| +||+++|+||.||+++|++ |+++||++|++|+|||+|++|+ .++|+++
T Consensus 142 i~~~-~~g~~~~~~~~~~i~~~T------klvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h--~~idv~~ 212 (405)
T COG0520 142 IPLD-DDGLLDLDALEKLITPKT------KLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGH--LPIDVQE 212 (405)
T ss_pred EecC-CCCCcCHHHHHHhcCCCc------eEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCc--cCCCchh
Confidence 9999 889999999999888765 9999999999999999999 9999999999999999999999 7999999
Q ss_pred CCCcEEEEcccc-ccCCCCCceEEEEEeCCCccccCCCCCC-Cceeeccccc-ccccccccCCCCCCccccchhhhhhhc
Q 006746 324 VRPDFLICSFYQ-IFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKK-QLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 324 ~~~Df~~~S~hK-~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
+++||+++|+|| ++| |+|+|+||+|++.++.+.|..+| |++..+.... ..| ...+.+| |
T Consensus 213 l~~Df~afsgHKwl~g--P~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~------------~~~p~rf---e- 274 (405)
T COG0520 213 LGCDFLAFSGHKWLLG--PTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTL------------AELPLRF---E- 274 (405)
T ss_pred cCCCEEEEcccccccC--CCceEEEEEchHHHhhcCCcccCCCceeeecccccccc------------cCcchhh---c-
Confidence 999999999999 667 99999999999999999888777 6665432211 011 0011122 3
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~ 480 (632)
.||+|++.+.++. +||++++++|++.|.+|++.|..++++.
T Consensus 275 ---------------~gTpn~~~~i~l~------------------------aAl~~~~~ig~~~i~~~e~~L~~~~~~~ 315 (405)
T COG0520 275 ---------------AGTPNIAGAIGLA------------------------AALDYLLEIGMEAIEAHERELTEYLLEG 315 (405)
T ss_pred ---------------cCCchHHHHHhHH------------------------HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 5667777778887 9999999999999999999999999999
Q ss_pred HHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
|.++ |.++||||.. ..|+++++|++.+ +++..|.+.++++||.+|+|++|..+..+.+
T Consensus 316 L~~~--------~~v~i~g~~~-~~r~~~vsF~v~~-----~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~-------- 373 (405)
T COG0520 316 LSEL--------PGVEIYGPPD-ADRGGIVSFNVKG-----IHPHDVATLLDEKGIAVRAGHHCAQPLHRLL-------- 373 (405)
T ss_pred HhcC--------CCeEEecCCc-ccCceEEEEEeCC-----CCHHHHHHHHHhCCeEEEeccccccHHHHhc--------
Confidence 9998 8899999976 6799999999999 8999999999999999999999998874332
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
. -.+.||+|+|+|||+||||+|+++|++++.
T Consensus 374 -------------------~-~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 374 -------------------G-VDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred -------------------C-CCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 0 123599999999999999999999999864
No 3
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=100.00 E-value=1.6e-55 Score=474.14 Aligned_cols=548 Identities=44% Similarity=0.683 Sum_probs=418.8
Q ss_pred hhhhHHHHhhccccCCCccCCCCCChhHHHHHHHHHHhCCCCCCchhHHHHHHhhccCcCCC-CceEeecCCCCCCCHHH
Q 006746 46 CRRDFAAVTASSIFPDTQFTNHESLPSLQQSLTEFTKAYPQYFDTYQIDQIRAKEYYQLSLS-NHTCLDYFGIGLFSYNQ 124 (632)
Q Consensus 46 ~~~~f~~~~~~~~~~~~~~~~~~~lp~l~~a~~~F~~~~p~y~~~~~~d~iR~~ef~~L~~~-~~vyLD~ag~gl~~~~~ 124 (632)
++++ +|+++ +|+.+.|+.+++||.+.+|+..|+++||.|++++++|++|..||.||... -.+++||+|.|++++.+
T Consensus 67 ~Q~r-~ril~--~f~tta~dy~v~lp~~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q 143 (728)
T KOG2142|consen 67 AQVR-LRILA--LFNTTAFDYEVSLPALTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQ 143 (728)
T ss_pred HHHH-HHHHH--HhccccccccchhHHHHHHHHHHHHhCccccccccccchhhhhhcccccccceeeeeeeccceEEeee
Confidence 4444 77777 89999999999999999999999999999999999999999999999643 25899999999999854
Q ss_pred HHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccch-hHHHHH-HHHHHHHHcCCCCCCccEEEeCCHHHHH
Q 006746 125 LHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE-SGLESA-MKKRIMDFLNISENDYGMVFTANRTSAF 202 (632)
Q Consensus 125 ~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~-~~~~~~-~R~~ia~~l~a~~~ey~vvft~naT~al 202 (632)
... ||+.-.|+++.+.+|.+.+.+|++.+ ...... ++.+++.+|++++++|.++||.+..+++
T Consensus 144 ~~~---------------i~~~~~~sls~~~~~ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSaf 208 (728)
T KOG2142|consen 144 TNE---------------ISDSEEFSLSESEANLSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSAF 208 (728)
T ss_pred eee---------------ccccccccccccccCcccchhcccchhcccccceeeeeeecccccCCceEEEEEeecccccc
Confidence 443 56777788899999999999997654 333334 8999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCC--CceeEEEEec
Q 006746 203 KLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKK--KQRGLFVFPL 280 (632)
Q Consensus 203 ~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~--~~~~Lv~~~~ 280 (632)
.++++++|+.-...+++.++|+++++.||++.|+.+|+++..+.+.||...+..+++++.+.+.|.+. ...+|++|+.
T Consensus 209 ~Ldaesy~f~~~~~lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~ 288 (728)
T KOG2142|consen 209 PLDAESYPFDFNPKLLTIFGYETGAVLVMNRSAELKGGKTASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPT 288 (728)
T ss_pred cchHhhCCCcccchheeecCCCchhhHHHhhhhHhhcCccceeecccchHHHHHHHHHHHHhhccccccchhhheeccch
Confidence 99999999988777889999999999999999999999999999999999999999999999876542 2578999999
Q ss_pred cCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCC-CCceEEEEEeCCCccccCC
Q 006746 281 HSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGEN-PSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 281 ~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~-P~G~G~L~Vr~~~~~~L~~ 359 (632)
++++||.++++.|+..+++++|++++|+.++++++|+.++++.++|||..+++|+.||.+ |.|+||+.|++.++..|+.
T Consensus 289 ~sRvtG~~ysy~wmt~al~~~whvlLda~~lG~kdmd~yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~l 368 (728)
T KOG2142|consen 289 QSRVTGGMYSYSWMTLALANNWHVLLDALALGPKDMDSYGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSAISGLEL 368 (728)
T ss_pred HhhhcccchhHHHHHHHHhhhHHHHHhhhccCcchHhhhhhhccCccceeeeEEEEeccCCCCceeeeeeehhhhhceec
Confidence 999999999999999999999999999999999999999999999999999999999987 9999999999999887765
Q ss_pred CCC---C-Cceeeccccc--cccc---------cccc-----CC---------------CCCCcc--ccchhhhhhhccc
Q 006746 360 NTS---S-GMVSLLPAKK--QLWL---------TDEF-----SS---------------CETEPE--QTSKSKQEKVAAT 402 (632)
Q Consensus 360 ~~~---g-G~v~~~~~~~--~~~~---------~~~~-----~~---------------~~~e~~--~~~~~~~e~e~gt 402 (632)
... + |++..+|... ..|. ++++ ++ +.++++ ...+.+.|.+++.
T Consensus 369 rtGcfcn~Gack~~pgl~~~~~~~~~~~g~~cgD~dg~~~s~~~~~~~~~~a~~~~~v~~~~~T~~lm~~~~~se~e~~~ 448 (728)
T KOG2142|consen 369 RTGCFCNIGACKIYPGLYLEMSQKGLSAGKGCGDNDGQPVSGYMQTPADVGAYLSAQVSDVLETDPLMKSPVFSEQEDSD 448 (728)
T ss_pred cCCCCCCCcceeecccccHHHHHHHhhhccccccCCCCcccccccchhhhhHHHHHhhhhhhhccccccccccchhhhcc
Confidence 432 4 8888766210 0000 0000 00 001111 0111222222222
Q ss_pred cCCCccchhh--hhhc------CC---cccchhhHhh--------------------------hhhhhh-----------
Q 006746 403 NTFSGPMSIE--MRQS------GK---LEQGEISEVR--------------------------RAEADS----------- 434 (632)
Q Consensus 403 ~~f~~~~~~~--~~~~------Gt---~~~~~i~~l~--------------------------~~~~~~----------- 434 (632)
+....|+..+ ..|. -. -.+.+|...+ +.++..
T Consensus 449 n~~a~Pl~~~~~~~R~~d~~~~s~~~~~~~~EI~~~~~~~~gl~~~~s~m~~~~~~~alr~etE~e~~Li~~~~~~~~d~ 528 (728)
T KOG2142|consen 449 NGIATPLLERVQLKRHFDAAVASYPIKCAAFEIEEENSGSQGLKYDRSWMSVDMNGSALRQETESELCLIGPRIKVQEDE 528 (728)
T ss_pred ccccCCcchhhcccchhhhhhhhhhhhhceeEeeccCccccccccccccccccccccceeeecccceeeeccccchhhhc
Confidence 2100011100 0000 00 0000111000 000000
Q ss_pred -----------hhhhcc-CCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCC--CCCcEEEECC
Q 006746 435 -----------IQQKNA-NTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTE--GNALVKIYGP 500 (632)
Q Consensus 435 -----------~~~~~~-~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~--G~p~v~Iygp 500 (632)
|+++-. .-.-...+ .|++||+.+.+|+.....|.++|++||+..|..+.|+... -+++|+||||
T Consensus 529 ~~~~~vs~~~sl~~~~a~~~s~~d~~--~c~~iDh~~~lgln~t~~r~r~ll~wl~~sl~~~~~~~~~~~~~nlvq~ygp 606 (728)
T KOG2142|consen 529 QSERRVSFPTSLEQGEASKCSSYDCP--PCRGIDHVDSLGLNLTTNRGRELLNWLVQSLRNLQHSESSSTTVNLVQIYGP 606 (728)
T ss_pred ccceeecchhhhhhhhhhhcccccCc--cccccchhhhhhHHhhhhhhhhHHHHHHHhcccccccccccccccceeeecC
Confidence 000000 00000011 2689999999999999999999999999999888877544 3689999999
Q ss_pred CCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCC
Q 006746 501 KIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 580 (632)
Q Consensus 501 ~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 580 (632)
+.+..||+.++||++|+.++++.|.+|++++++.+|.++.+++.++.+.+.--....+.+..... .. ...
T Consensus 607 k~~~erG~~~~fnl~d~~~~fr~p~IV~~lae~E~isl~~~~l~~iri~dp~~r~~dq~~~~r~~-----~~-----~~~ 676 (728)
T KOG2142|consen 607 KTKYERGPAVAFNLFDLSKRFRAPIIVNKLAEREEISLGELSLGHIRIQDPCHRDIDQLLGQRRG-----RT-----NGE 676 (728)
T ss_pred ccccccChhheeehhhhhccccchhhhcchhhhhcccccceeeeeeEEecCcchhhhHHhhhhcc-----cc-----ccc
Confidence 99999999999999999999999999999999999999999998888766110011222222110 00 134
Q ss_pred CCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhcccccccceee
Q 006746 581 LGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVEKARWRYT 623 (632)
Q Consensus 581 ~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f~~~~~~~~~ 623 (632)
.+..+||+++||.+|||||+++|+|+++||+++||+++.||-.
T Consensus 677 ~Rl~vvt~~lgfltnfedv~K~w~fv~~fl~pgf~~~~~~~~~ 719 (728)
T KOG2142|consen 677 SRLSVVTARLGFLTNFEDVYKLWEFVARFLDPGFVEKVELRTV 719 (728)
T ss_pred eeEeeeeeehhhhhchHHHHHHHHHHHHhcChhhhhhccccch
Confidence 5678999999999999999999999999999999999999966
No 4
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-52 Score=437.26 Aligned_cols=369 Identities=18% Similarity=0.153 Sum_probs=317.7
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
.+||||++++++...++++|..++.. .++||+|.+.||.++.++++++|+.|++++|++|+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~-------------------~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~ 62 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTE-------------------VFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE 62 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHh-------------------hcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 68999999999999999998765432 13899999999999999999999999999999984
Q ss_pred CccEEEeCCHHHHHHHHHhh--CCCC---CCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHH
Q 006746 189 DYGMVFTANRTSAFKLLAES--YPFM---SVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKM 262 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~s--l~~~---~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~ 262 (632)
+|+||+++|++.|+++.+ +.+. .|.+|+ +..||++ ..+.++.+ +++|.+|.++|++ .+|.+++++|+++
T Consensus 63 --eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~a-Vl~~~~~L-e~~g~~Vtyl~V~-~~G~v~~e~L~~a 137 (386)
T COG1104 63 --EIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPA-VLNTCRYL-ERQGFEVTYLPVD-SNGLVDLEQLEEA 137 (386)
T ss_pred --eEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHH-HHHHHHHH-HhcCCeEEEeCCC-CCCeEcHHHHHHh
Confidence 899999999999999988 4332 466766 4579987 66776665 8899999999999 7999999999999
Q ss_pred HHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCC
Q 006746 263 VVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 263 i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
|+++| .||++.|++|.+|+++|++ |.++||++|+++++||+|++|+ .+||+..+++|++.+|+||+.| |
T Consensus 138 l~~~T------~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gk--ipi~~~~~~vD~ls~SaHK~~G--p 207 (386)
T COG1104 138 LRPDT------ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGK--IPIDLEELGVDLLSFSAHKFGG--P 207 (386)
T ss_pred cCCCc------eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCc--eeccccccCcceEEeehhhccC--C
Confidence 99875 9999999999999999999 9999999999999999999999 8999999999999999999999 9
Q ss_pred CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCccc
Q 006746 342 SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQ 421 (632)
Q Consensus 342 ~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~ 421 (632)
.|+|+||||+.. .+.|...||.+. .| +|+||.|+
T Consensus 208 kGiGaLyv~~~~--~~~p~i~GGgQE--------------------------------~g------------~RsGTenv 241 (386)
T COG1104 208 KGIGALYVRPGV--RLEPLIHGGGQE--------------------------------RG------------LRSGTENV 241 (386)
T ss_pred CceEEEEECCCC--ccCceeccCcCC--------------------------------CC------------CCCCCccH
Confidence 999999998877 578877775431 11 26899999
Q ss_pred chhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCC
Q 006746 422 GEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 501 (632)
Q Consensus 422 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~ 501 (632)
|.|.++. .|++...+ .++....|++.|.+.|.+.|++. .|.+.+.|..
T Consensus 242 ~~Ivg~~------------------------~A~~~a~~-~~~~~~~~~~~lr~~l~~~l~~~-------~p~~~~~g~~ 289 (386)
T COG1104 242 PGIVGFG------------------------KAAEIAVE-ELEEENARLRKLRDRLEDGLLEI-------IPDVYLNGDD 289 (386)
T ss_pred HHHHHHH------------------------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-------CCcEEEcCCc
Confidence 9999998 88888765 58899999999999999999976 3889888875
Q ss_pred CCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCC
Q 006746 502 IRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 581 (632)
Q Consensus 502 ~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 581 (632)
...-+.+++|.+++ ++.+.++-.++.+||.+++|+.|..+..... ++|.++.+. +..
T Consensus 290 -~~rlP~~~~~~f~g-----v~gE~ll~~L~~~gI~vStGSACsS~~~~pS-----hVL~AmG~~------------~e~ 346 (386)
T COG1104 290 -EPRLPNILNFSFPG-----VEGESLLLALDLAGIAVSTGSACSSGSLEPS-----HVLRAMGIS------------EEL 346 (386)
T ss_pred -ccCCCCeEEEEeCC-----CcHHHHHHhccccCeEEeccccccCCCCCcc-----HHHHHcCCC------------hHH
Confidence 23346799999999 7888889999999999999999999866554 666665321 133
Q ss_pred CCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 582 GITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 582 ~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||+|||.+||+|||+++++.+++.++.
T Consensus 347 a~~siR~S~g~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 347 AHGSIRFSLGRFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred hCccEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999987664
No 5
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=3e-50 Score=439.45 Aligned_cols=387 Identities=20% Similarity=0.264 Sum_probs=309.3
Q ss_pred hHHHHHHhhccCcCC----CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc-cccccc
Q 006746 92 QIDQIRAKEYYQLSL----SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGG 166 (632)
Q Consensus 92 ~~d~iR~~ef~~L~~----~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s-~~~~g~ 166 (632)
+++.+|+ +||.++. .+.|||||++++++|+++++++.+++... .+|+++ .+..+.
T Consensus 4 ~~~~~r~-~fp~~~~~~~~~~~iYld~a~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~ 63 (406)
T PRK09295 4 SVEKVRA-DFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHG-------------------YAAVHRGIHTLSA 63 (406)
T ss_pred ChHHHHh-hCccccCcCCCCceEEEeCcccccCCHHHHHHHHHHHHhc-------------------CCCCCCcccHHHH
Confidence 5578887 6999842 13799999999999999999987765321 133322 111233
Q ss_pred chhHHHHHHHHHHHHHcCC-CCCCccEEEeCCHHHHHHHHHhhC---CCCCCCeEE-EeccccchhhHHHHHHHHhcCCE
Q 006746 167 QESGLESAMKKRIMDFLNI-SENDYGMVFTANRTSAFKLLAESY---PFMSVKNLL-TVYDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 167 ~~~~~~~~~R~~ia~~l~a-~~~ey~vvft~naT~al~lv~~sl---~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~ 241 (632)
...+.++++|+.|++++|+ +++ +|+||+|+|+++++++.++ .+++||+|+ +..+|+++...| ...+++.|++
T Consensus 64 ~~~~~~~~~r~~la~~~~~~~~~--~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-~~~~~~~g~~ 140 (406)
T PRK09295 64 QATEKMENVRKQAALFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPW-QMLCARVGAE 140 (406)
T ss_pred HHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHH-HHHHHHcCcE
Confidence 4568899999999999998 443 7999999999999999987 467899976 556888865566 5667889999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG 320 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld 320 (632)
++.++++ +++.++.++|+++++++ ++||++++++|+||.++|++ |+++||++|++++||++|++|. .++|
T Consensus 141 v~~v~~~-~~~~~d~~~l~~~i~~~------t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~--~~~~ 211 (406)
T PRK09295 141 LRVIPLN-PDGTLQLETLPALFDER------TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMH--HPVD 211 (406)
T ss_pred EEEEecC-CCCCCCHHHHHHhcCCC------cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCc--cccC
Confidence 9999987 56779999999998764 48999999999999999999 9999999999999999999998 6899
Q ss_pred CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCce-eecccccccccccccCCCCCCccccchhhhhhh
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMV-SLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
+..+++||+++|+||++| |.|+|+||++++.++.+++...||.. .... ....+ .+. ..+.+|
T Consensus 212 ~~~~~~D~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~--------~~~--~~~~r~---- 274 (406)
T PRK09295 212 VQALDCDFYVFSGHKLYG--PTGIGILYVKEALLQEMPPWEGGGSMIATVS-LTEGT--------TWA--KAPWRF---- 274 (406)
T ss_pred chhcCCCEEEeehhhccC--CCCcEEEEEchHhHhhCCCcccCCceeeeee-cCCcc--------ccC--Cchhhc----
Confidence 999999999999999999 88999999999988888665544432 2110 00000 000 000111
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
+.||+|++.+.++. +||+++.++|+++|.+|.+.|.++|++
T Consensus 275 ---------------e~GT~~~~~~~~l~------------------------~al~~~~~~g~~~i~~~~~~l~~~l~~ 315 (406)
T PRK09295 275 ---------------EAGTPNTGGIIGLG------------------------AALDYVSALGLNNIAEYEQNLMHYALS 315 (406)
T ss_pred ---------------CCCCccHHHHHHHH------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 35777888888887 999999999999999999999999999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
.|.++ +.+++++|. .|.++++|++.+ +++..+.+.++++||.+++|++|+.+....+
T Consensus 316 ~l~~~--------~~~~~~~~~---~~~~iv~~~~~~-----~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~------- 372 (406)
T PRK09295 316 QLESV--------PDLTLYGPQ---NRLGVIAFNLGK-----HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYY------- 372 (406)
T ss_pred HHhcC--------CCEEEeCCC---CCceEEEEEECC-----cCHHHHHHHHHhCCeEEeccccchHHHHHHH-------
Confidence 99987 679999984 478999999876 5677787788899999999999997653322
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
. ..+.||+|+|+|||+|||++|+++|++..
T Consensus 373 --------------------~-~~~~iRiS~~~ynt~~did~l~~~l~~i~ 402 (406)
T PRK09295 373 --------------------N-VPAMCRASLAMYNTHEEVDRLVAGLQRIH 402 (406)
T ss_pred --------------------C-CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 1 23689999999999999999999998763
No 6
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=9.6e-50 Score=430.21 Aligned_cols=365 Identities=23% Similarity=0.266 Sum_probs=291.8
Q ss_pred eEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccc-cccchhHHHHHHHHHHHHHcCCCCC
Q 006746 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLL-HGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 110 vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~-~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
||||++|.|++|+.+++++.+++... .+|+++... .+.+..++++++|+.+++++|+++
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~- 60 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNF-------------------YANPHSGVSHRSREFAEILEEAREALAKLLGAPP- 60 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHS-------------------GSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSST-
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHh-------------------hhcCcccccchhhhhhHHHHHHHHHHHHhcCCcc-
Confidence 79999999999999999987754321 134422221 233457899999999999999997
Q ss_pred CccEEEeCCHHHHHHHHHhhC--CCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 189 DYGMVFTANRTSAFKLLAESY--PFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl--~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
+++|+||+|+|.|+++++.++ ++++|++|+ +..+|+++...| .+.+++.|++|+.++.+ .++.++++++++.|.+
T Consensus 61 ~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~-~~~~~~~g~~v~~i~~~-~~~~~~~~~~~~~l~~ 138 (371)
T PF00266_consen 61 DEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPW-EEIAKRKGAEVRVIPAD-PGGSLDLEDLEEALNP 138 (371)
T ss_dssp TEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHH-HHHHHHTTEEEEEEEEG-TTSSCSHHHHHHHHHT
T ss_pred ccccccccccchhhhhhhhcccccccccccccccccccccccccc-ccccccchhhhcccccc-ccchhhhhhhhhhhcc
Confidence 258999999999999999999 679999965 678999854444 66778899999999998 5678999999999986
Q ss_pred cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCce
Q 006746 266 KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGF 344 (632)
Q Consensus 266 ~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~ 344 (632)
+ ++||+++|+++.||.++|++ |.++||++|++++||++|++|. .++|++++++||+++|+||++| |.|+
T Consensus 139 ~------~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~--~~id~~~~~~D~~~~s~~Kl~g--p~G~ 208 (371)
T PF00266_consen 139 D------TRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGC--VPIDLDELGADFLVFSSHKLGG--PPGL 208 (371)
T ss_dssp T------ESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTT--SS--TTTTTESEEEEESTSTTS--SSTE
T ss_pred c------cceEEeecccccccEEeeeceehhhhhccCCceeEechhcccc--ccccccccccceeeecccccCC--CCch
Confidence 4 59999999999999999999 9999999999999999999998 6999999999999999999777 9999
Q ss_pred EEEEEeCCCccccCCCCCC-CceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 345 GCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 345 G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
|+||||++++++++|...| +....... ..|. . .+.. + -.+.||++++.
T Consensus 209 g~l~v~~~~~~~~~p~~~~~~~~~~~~~--~~~~-----------------~----~~~~-~-------~~~~GT~~~~~ 257 (371)
T PF00266_consen 209 GFLYVRPEAIERLRPAKPGGGYLDFPSL--QEYG-----------------L----ADDA-R-------RFEGGTPNVPA 257 (371)
T ss_dssp EEEEEEHHHHHHHHTSSSSSSTTTHHHH--HHHC-----------------H----HSTT-T-------GSSSSS--HHH
T ss_pred hhheehhhhhhccccccccccccccccc--hhcc-----------------c----cccc-c-------cccccceeeeh
Confidence 9999999999999887766 22211100 0000 0 0000 0 01357888888
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 503 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~ 503 (632)
++++. .+|+++.++|+++|.+|...|.+++++.|.++ +.+++++|+..
T Consensus 258 ~~~l~------------------------~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~--------~~~~~~~~~~~ 305 (371)
T PF00266_consen 258 IYALN------------------------EALKLLEEIGIERIRERIRELAEYLREALEEL--------PGIEVLGPDDE 305 (371)
T ss_dssp HHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------TTEEESSSSCG
T ss_pred hhhHH------------------------HHHhhhhccccccchhhhhhHHHHHHhhhhcC--------CceeEeeeccc
Confidence 99998 99999999999999999999999999999998 77999998766
Q ss_pred CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCC
Q 006746 504 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 583 (632)
Q Consensus 504 ~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 583 (632)
..++++++|++.+ +++..+.+.++++||.+++|+.|+....... . -.
T Consensus 306 ~~~~~i~~~~~~~-----~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~---------------------------~-~~ 352 (371)
T PF00266_consen 306 PRRPSIVSFNLPG-----SDADDVVKYLEERGIAVSTGSACAGPSLDIL---------------------------G-MG 352 (371)
T ss_dssp GBGTTEEEEEETT-----SSHHHHHHHHHHHTEEEEESTTTCHHHHHHH---------------------------H-TT
T ss_pred ccccceEEEeecC-----CCHHHHHHHHhhcCEEEeccCcccHHHHHHh---------------------------C-CC
Confidence 7889999999977 6778888877777999999999995443332 0 12
Q ss_pred cEEEEccCCCCCHHHHHHH
Q 006746 584 TVVTASLGYLANFEDVYRL 602 (632)
Q Consensus 584 ~~VRvSlg~~~t~eDV~rl 602 (632)
++||||+|+|||+|||++|
T Consensus 353 ~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 353 GVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TEEEEE-GTTSSHHHHHHH
T ss_pred CEEEEeccCCCCHHHHhhC
Confidence 7999999999999999997
No 7
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=8.4e-48 Score=422.59 Aligned_cols=389 Identities=21% Similarity=0.272 Sum_probs=304.4
Q ss_pred HHHhhccCcCC----CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccccccc-ccchhH
Q 006746 96 IRAKEYYQLSL----SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLH-GGQESG 170 (632)
Q Consensus 96 iR~~ef~~L~~----~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~-g~~~~~ 170 (632)
+|+ +||.++. ++.+|||+++.++.|+.+++++.+++.... .|+++...+ +....+
T Consensus 17 ~r~-~fp~~~~~~~~~~~iyLd~a~~~~~p~~v~~a~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 76 (424)
T PLN02855 17 TRP-DFPILDQTVNGSKLVYLDNAATSQKPAAVLDALQDYYEEYN-------------------SNVHRGIHALSAKATD 76 (424)
T ss_pred HHH-hCchhccccCCCCeEEeeCccccCCCHHHHHHHHHHHHhcC-------------------CCCCCccchHHHHHHH
Confidence 454 6998842 247999999999999999999877653221 233221111 222356
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC---CCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY---PFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl---~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.++++|+.|++++|+++ +++|+||+|+|+++++++.++ .+++|++|++ ..+|+++...| ...+++.|++++.++
T Consensus 77 ~~~~~r~~la~~~~~~~-~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-~~~a~~~g~~v~~v~ 154 (424)
T PLN02855 77 AYELARKKVAAFINAST-SREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPW-QLVAQKTGAVLKFVG 154 (424)
T ss_pred HHHHHHHHHHHHcCCCC-CCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHH-HHHHHHcCCEEEEEe
Confidence 78899999999999963 248999999999999999986 4688999775 56888754455 567788999999999
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR 325 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~ 325 (632)
++ +++.+++++|++.|+++ ++||++++++|.||.++|++ |+++||++|++++||++|++|. .++|+..++
T Consensus 155 ~~-~~~~~~~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~--~~~~~~~~~ 225 (424)
T PLN02855 155 LT-PDEVLDVEQLKELLSEK------TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPH--MPVDVQTLG 225 (424)
T ss_pred cC-CCCCcCHHHHHHHhccC------ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC--cCCCchhcC
Confidence 87 44568999999999764 48999999999999999999 9999999999999999999997 689999999
Q ss_pred CcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCC
Q 006746 326 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 405 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f 405 (632)
+||+++|+||++| |.|+|+||++++.++.++|...||..... . |.... .+.. .+.++
T Consensus 226 ~d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~p~~~g~~~~~~-~----~~~~~----~~~~--~~~r~---------- 282 (424)
T PLN02855 226 ADFLVASSHKMCG--PTGIGFLWGKSDLLESMPPFLGGGEMISD-V----FLDHS----TYAP--PPSRF---------- 282 (424)
T ss_pred CCEEEeecccccC--CCccEEEEEchhhhhcCCCEecCCCceee-e----ecCcc----ccCC--Chhhc----------
Confidence 9999999999988 88999999999998888765544332100 0 10000 0000 00011
Q ss_pred CccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccC
Q 006746 406 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 485 (632)
Q Consensus 406 ~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~ 485 (632)
+.||++++.++++. .+|+++.++|+++|.+|++.|.++|++.|.++
T Consensus 283 ---------e~GT~~~~~~~~l~------------------------~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~- 328 (424)
T PLN02855 283 ---------EAGTPAIGEAIGLG------------------------AAIDYLSEIGMDRIHEYEVELGTYLYEKLSSV- 328 (424)
T ss_pred ---------cCCChHHHHHHHHH------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC-
Confidence 35777888888887 99999999999999999999999999999887
Q ss_pred CCCCCCCCcEEEECCCC--CCCCCcEEEEEEccCCCCccCHHHHHHHHHhC-CcEEccCccCChHHHhHHHHhhhhhhhh
Q 006746 486 HPNTEGNALVKIYGPKI--RFDRGPALAFNVFDWKREKIEPVLVQKLADRE-NISLSYGSLHHIWFSDKYQKEKDNVLEK 562 (632)
Q Consensus 486 h~~~~G~p~v~Iygp~~--~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~-gI~lr~G~~c~~~~~~~~~~~~~~~l~~ 562 (632)
|.++||+|.. ...|+++++|++.+ +++..|.+.+.++ ||.+++|++|+.+.....
T Consensus 329 -------~g~~i~~~~~~~~~~r~~~v~~~~~~-----~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~---------- 386 (424)
T PLN02855 329 -------PGVRIYGPKPSEGVGRAALCAFNVEG-----IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYL---------- 386 (424)
T ss_pred -------CCEEEeCCCcccccCcccEEEEEECC-----cCHHHHHHHhcccCCEEEechhhhhHHHHHHh----------
Confidence 7799999864 34578999999976 5677777766655 999999999997543111
Q ss_pred hhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 563 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ -.+.||||+|+|||++||++|+++|++.+..
T Consensus 387 -----------------g-~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 387 -----------------G-VNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred -----------------C-CCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 1 1258999999999999999999999987644
No 8
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=2e-47 Score=415.92 Aligned_cols=387 Identities=15% Similarity=0.187 Sum_probs=306.1
Q ss_pred hHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccc-cccccchhH
Q 006746 92 QIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGGQESG 170 (632)
Q Consensus 92 ~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~-~~~g~~~~~ 170 (632)
+++++|+ +||.|+ ++.+||||+++|+.|+.+++++.+++... .+|++.. +..+....+
T Consensus 2 ~~~~~r~-~fp~l~-~~~iyld~a~~~~~p~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 60 (398)
T TIGR03392 2 NPAQFRQ-QFPALQ-DGTVYLDSAATALKPQAVIDATQQFYRLS-------------------SGTVHRSQHQQAQSLTA 60 (398)
T ss_pred ChhHHHH-hCCccC-CCeEEeeCccccCCCHHHHHHHHHHHHhc-------------------CCCCCCcccHHHHHHHH
Confidence 4567886 699984 46899999999999999999987755321 1343321 111223457
Q ss_pred HHHHHHHHHHHHcCCC-CCCccEEEeCCHHHHHHHHHhhC---CCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEE
Q 006746 171 LESAMKKRIMDFLNIS-ENDYGMVFTANRTSAFKLLAESY---PFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~-~~ey~vvft~naT~al~lv~~sl---~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.++++|+.+++++|++ ++ +|+||+|+|+|+++++.++ .+++||+|++ ..+|+++...| ...+++.|++++.+
T Consensus 61 ~~~~~r~~la~~~g~~~~~--~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~-~~~~~~~g~~v~~v 137 (398)
T TIGR03392 61 RYELARQQVARFLNAPDAE--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPW-LMVAQQTGAKVVKL 137 (398)
T ss_pred HHHHHHHHHHHHhCCCCCC--eEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHH-HHHHHHcCcEEEEE
Confidence 8899999999999995 44 7999999999999999998 4789999765 56888754555 55678899999999
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLV 324 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~ 324 (632)
+.+ +++.+++++|+++++++ ++|+++++++|+||..+|++ |+++||++|+++++|++|++++ .+++++.+
T Consensus 138 ~~~-~~~~~~~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~--~~~~~~~~ 208 (398)
T TIGR03392 138 PIG-ADLLPDIRQLPELLTPR------TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVH--GPPDVQAL 208 (398)
T ss_pred ecC-CCCCcCHHHHHHHhccC------ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC--CCCChhhc
Confidence 987 55678999999999765 48999999999999999999 9999999999999999999887 58899889
Q ss_pred CCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccC
Q 006746 325 RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 404 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~ 404 (632)
++||+++|+||+|| |.|+|+||++++.++.+.+...||....... ++ .+...+.+.++
T Consensus 209 ~~d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~---~~--------~~~~~~~~~~~--------- 266 (398)
T TIGR03392 209 DIDFYAFSGHKLYG--PTGIGVLYGKTELLEAMPPWQGGGKMLSHVS---FD--------GFIPQAVPHRF--------- 266 (398)
T ss_pred CCCEEEEecccccC--CCceEEEEEcHHHHhhCCCeecCCceEeecc---cc--------ccccCCChhhc---------
Confidence 99999999999999 8899999999998888866443333211000 00 01100011111
Q ss_pred CCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcc
Q 006746 405 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 484 (632)
Q Consensus 405 f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l 484 (632)
+.||++++.+.++. .|++++.+.|++++.+|.+.|.+++++.|.++
T Consensus 267 ----------e~GT~~~~~~~a~~------------------------~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l 312 (398)
T TIGR03392 267 ----------EAGTPNIAGVIGLS------------------------AALEWLTDIDIAAAEAWSVSLADLAEERLAQL 312 (398)
T ss_pred ----------cCCCCCHHHHHHHH------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 35777888888887 99999999999999999999999999999987
Q ss_pred CCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhh
Q 006746 485 QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 564 (632)
Q Consensus 485 ~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~ 564 (632)
|.++++++. .+++++|++.+ ++.+.+.+.++++||.++.|++|+.......
T Consensus 313 --------~g~~~~~~~----~~~i~~~~~~~-----~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~------------ 363 (398)
T TIGR03392 313 --------PGFRSFRCP----GSSLLAFDFAG-----VHHSDLAALLAESGIALRAGQHCAQPLMAAL------------ 363 (398)
T ss_pred --------CCeEEeCCC----CCcEEEEEeCC-----cCHHHHHHHHHhCCEEEecCccchHHHHHHh------------
Confidence 668888753 46899999876 5677787777889999999999996543221
Q ss_pred ccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 565 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ ..++||||+|+|||.+||++|+++|+++++.
T Consensus 364 ---------------g-~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 364 ---------------G-VSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred ---------------C-CCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 1 1369999999999999999999999987763
No 9
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=5.1e-47 Score=413.15 Aligned_cols=387 Identities=17% Similarity=0.208 Sum_probs=307.3
Q ss_pred hHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc-ccccccchhH
Q 006746 92 QIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESG 170 (632)
Q Consensus 92 ~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s-~~~~g~~~~~ 170 (632)
+++++|+ +||.|+ ++.+||||+++|+.|+.+++++.+++... .+|++. .+..+....+
T Consensus 5 ~~~~~r~-~fp~l~-~~~~yld~a~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 63 (401)
T PRK10874 5 NPAQFRA-QFPALQ-DAGVYLDSAATALKPQAVIEATQQFYSLS-------------------AGNVHRSQFAAAQRLTA 63 (401)
T ss_pred CHHHHHH-hCCCcC-CceEEEeCCcccCCCHHHHHHHHHHHHhc-------------------cCCCCCcccHHHHHHHH
Confidence 5678886 699885 46899999999999999999987765421 134332 1112333467
Q ss_pred HHHHHHHHHHHHcCC-CCCCccEEEeCCHHHHHHHHHhhC---CCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEE
Q 006746 171 LESAMKKRIMDFLNI-SENDYGMVFTANRTSAFKLLAESY---PFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a-~~~ey~vvft~naT~al~lv~~sl---~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.++++|+.+++++|+ +++ +|+||+|+|+++++++.++ .+++||+|+ +..+|+++...| ...+++.|++++.+
T Consensus 64 ~~~~~r~~la~~~g~~~~~--~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-~~~~~~~g~~v~~v 140 (401)
T PRK10874 64 RYEAAREQVAQLLNAPDAK--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPW-LMVAQQTGAKVVKL 140 (401)
T ss_pred HHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHH-HHHHHHhCCEEEEE
Confidence 899999999999999 544 7999999999999999998 478999976 457888854555 55678899999999
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLV 324 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~ 324 (632)
+++ .++.+++++++++|+++ ++|+++++++|.||.++|++ |+++|+++|++++||++|++|. .++|++.+
T Consensus 141 ~~~-~~~~~d~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~--~~~~~~~~ 211 (401)
T PRK10874 141 PLG-ADRLPDVDLLPELITPR------TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVH--FPADVQAL 211 (401)
T ss_pred ecC-CCCcCCHHHHHHhcCcC------cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccc--ccCCchhc
Confidence 987 56778999999999765 48999999999999999999 9999999999999999999887 58888889
Q ss_pred CCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccC
Q 006746 325 RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 404 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~ 404 (632)
++||+++|+||+|| |.|+|+||++++.++.+++...||..... ..|. .+.....+.++
T Consensus 212 ~~d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~--------- 269 (401)
T PRK10874 212 DIDFYAFSGHKLYG--PTGIGVLYGKSELLEAMSPWQGGGKMLTE----VSFD-------GFTPQSAPWRF--------- 269 (401)
T ss_pred CCCEEEEecccccC--CCccEEEEEchHHHhcCCCeecCCcceEe----eccC-------ccCCCCChhhc---------
Confidence 99999999999999 88999999999998888765433321100 0010 01100000111
Q ss_pred CCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcc
Q 006746 405 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 484 (632)
Q Consensus 405 f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l 484 (632)
+.||+|++.+.++. .|++++.++|++++.+|++.|.+++++.|.++
T Consensus 270 ----------e~Gt~~~~~~~al~------------------------~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~ 315 (401)
T PRK10874 270 ----------EAGTPNVAGVIGLS------------------------AALEWLADIDINQAESWSRSLATLAEDALAKL 315 (401)
T ss_pred ----------cCCCcCHHHHHHHH------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 35777888888887 99999999999999999999999999999987
Q ss_pred CCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhh
Q 006746 485 QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 564 (632)
Q Consensus 485 ~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~ 564 (632)
|.++++++. .+++++|++.+ ++...+.+++.++||.++.|++|..+.....
T Consensus 316 --------~g~~~~~~~----~~~i~~~~~~~-----~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~------------ 366 (401)
T PRK10874 316 --------PGFRSFRCQ----DSSLLAFDFAG-----VHHSDLVTLLAEYGIALRAGQHCAQPLLAAL------------ 366 (401)
T ss_pred --------CCEEEeCCC----CCcEEEEEECC-----cCHHHHHHHHHHCCcEEeccccchHHHHHHh------------
Confidence 668888763 46899999865 5677787777889999999999986533221
Q ss_pred ccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 565 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ ..+.||+|+|+|||.+||++|+++|++++..
T Consensus 367 ---------------g-~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 367 ---------------G-VTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred ---------------C-CCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 1 1369999999999999999999999988763
No 10
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=5.6e-45 Score=397.07 Aligned_cols=387 Identities=19% Similarity=0.278 Sum_probs=304.5
Q ss_pred HHHHhhccCcCC----CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccccc-ccccchh
Q 006746 95 QIRAKEYYQLSL----SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL-LHGGQES 169 (632)
Q Consensus 95 ~iR~~ef~~L~~----~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~-~~g~~~~ 169 (632)
++|+ +||.++. +..+|||+++.|++|+.+++++.+++... .+|+++.. .++....
T Consensus 2 ~~~~-~f~~~~~~~~~~~~~yld~~~~~~~p~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 61 (403)
T TIGR01979 2 NIRA-DFPILKRKINGKPLVYLDSAATSQKPQQVIDAVAEYYRNS-------------------NANVHRGIHTLSVRAT 61 (403)
T ss_pred chhh-hCchhcCCCCCCceEEEeCccccCCCHHHHHHHHHHHHhC-------------------CCCCCCCccHHHHHHH
Confidence 3565 6998842 13599999999999999999987654321 13443321 1122345
Q ss_pred HHHHHHHHHHHHHcCCC-CCCccEEEeCCHHHHHHHHHhhCC---CCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEE
Q 006746 170 GLESAMKKRIMDFLNIS-ENDYGMVFTANRTSAFKLLAESYP---FMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~-~~ey~vvft~naT~al~lv~~sl~---~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
+.++++|+.|++++|++ ++ +|+||+|+|+|+++++.++. +++|++|++ ..+|+++...| ...++..|++++.
T Consensus 62 ~~~~~~r~~ia~~~~~~~~~--~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~-~~~~~~~g~~~~~ 138 (403)
T TIGR01979 62 EAYEAVREKVAKFINAASDE--EIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPW-QLLAERTGATLKF 138 (403)
T ss_pred HHHHHHHHHHHHHhCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHH-HHHHHhcCcEEEE
Confidence 67889999999999998 43 79999999999999999873 578999765 56888754444 5667788999999
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCC
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSL 323 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~ 323 (632)
++++ .++.++.+++++.++++ ++++++++++|.||.++|++ |+++||++|+++++|++|.+|. .++|++.
T Consensus 139 v~~~-~~~~~~~~~l~~~i~~~------~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~--~~~~~~~ 209 (403)
T TIGR01979 139 IPLD-DDGTLDLDDLEKLLTEK------TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPH--MPVDVQA 209 (403)
T ss_pred EecC-CCCCCCHHHHHHHhccC------CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCc--cccCccc
Confidence 9988 67789999999999764 48999999999999999999 9999999999999999999987 6889998
Q ss_pred CCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCC-ceeecccccccccccccCCCCCCccccchhhhhhhccc
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSG-MVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 402 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG-~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt 402 (632)
+++||+++|+||+|| |.|+|+||++++.++.+++...|| ++.... + .. ..+.. .+.++
T Consensus 210 ~~~d~~~~s~~K~~g--p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~-----~--~~---~~~~~--~~~~~------- 268 (403)
T TIGR01979 210 LDCDFYVFSGHKMYG--PTGIGVLYGKEELLEQMPPFLGGGEMIAEVS-----F--EE---TTYNE--APHKF------- 268 (403)
T ss_pred cCCCEEEEecccccC--CCCceEEEEchHHHhcCCCeecCCCceeecc-----c--Cc---cccCC--Chhhc-------
Confidence 999999999999999 889999999999888787655443 322110 0 00 00000 00011
Q ss_pred cCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Q 006746 403 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 482 (632)
Q Consensus 403 ~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~ 482 (632)
+.||++++.+.++. .+|+++.++|++++.+|...|.++|++.|.
T Consensus 269 ------------~~gt~~~~~~~al~------------------------~al~~~~~~g~~~~~~~~~~l~~~l~~~l~ 312 (403)
T TIGR01979 269 ------------EAGTPNIAGVIGLG------------------------AAIDYLEAIGLENIEAHEHELTAYALERLG 312 (403)
T ss_pred ------------CCCCccHHHHHHHH------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 24667777777777 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhh
Q 006746 483 KLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 562 (632)
Q Consensus 483 ~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~ 562 (632)
++ +.+++++|.....++++++|++.+ ++...++++++++||.++.|++|+.+....+
T Consensus 313 ~~--------~g~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~---------- 369 (403)
T TIGR01979 313 EI--------PGLRIYGPRDAEDRGGIISFNVEG-----VHPHDVGTILDEEGIAVRSGHHCAQPLMRRF---------- 369 (403)
T ss_pred cC--------CCEEEeCCCCccccCceEEEEeCC-----cCHHHHHHHHhhCCEEEcchhhhhHHHHHHh----------
Confidence 87 679999987555679999999876 5667788888899999999999976532221
Q ss_pred hhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 563 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+ ..+.||+|+|+|||.+||++|+++|+++++
T Consensus 370 -----------------~-~~~~iRiS~~~~~t~~di~~l~~~l~~~~~ 400 (403)
T TIGR01979 370 -----------------G-VPATCRASFYIYNTEEDIDALVEALKKVRK 400 (403)
T ss_pred -----------------C-CCCEEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 0 236899999999999999999999988654
No 11
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=9.4e-46 Score=398.41 Aligned_cols=357 Identities=15% Similarity=0.126 Sum_probs=282.9
Q ss_pred eEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc-ccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 110 vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s-~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
+||||++.+++|+.+++++.+++.. .++||++ .+.++....+.++++|+++++++|++++
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~ 61 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIE-------------------HFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK 61 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHh-------------------CCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 6999999999999999998775432 1145544 2222334467899999999999999875
Q ss_pred CccEEEeCCHHHHHHHHHhhC-C--CCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 189 DYGMVFTANRTSAFKLLAESY-P--FMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl-~--~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
+|+||+|+|+|+++++.++ . +++|++|++ ..+|++....| .. ++++|++++.++++ +++.++.++|+++|+
T Consensus 62 --~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~-~~-~~~~g~~v~~v~~~-~~~~~d~~~l~~~i~ 136 (364)
T PLN02651 62 --EIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSC-RH-LQQEGFEVTYLPVK-SDGLVDLDELAAAIR 136 (364)
T ss_pred --eEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHH-HH-HHhcCCEEEEEccC-CCCcCCHHHHHHhcC
Confidence 7999999999999887664 1 467899765 56888743334 33 34789999999987 567899999999997
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG 343 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G 343 (632)
++ ++|+++++++|.||.++|++ |.++||++|++++||++|++|. .++|++++++||+++|+|||+| |.|
T Consensus 137 ~~------t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~--~~~~~~~~~~D~~~~s~hK~~g--p~G 206 (364)
T PLN02651 137 PD------TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGK--IPVDVDDLGVDLMSISGHKIYG--PKG 206 (364)
T ss_pred CC------cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCC--cccCcccCCCCEEEechhhhCC--CCc
Confidence 65 48999999999999999999 9999999999999999999998 6999999999999999999977 999
Q ss_pred eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 344 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 344 ~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
+|+||||++.+..+.|...||... . . ++.||+|++.
T Consensus 207 ~g~l~v~~~~~~~l~p~~~g~~~~------------~-------------~-------------------~~~GT~~~~~ 242 (364)
T PLN02651 207 VGALYVRRRPRVRLEPLMSGGGQE------------R-------------G-------------------RRSGTENTPL 242 (364)
T ss_pred eEEEEEcCCCCCCCCccccCCCcc------------C-------------C-------------------ccCCCccHHH
Confidence 999999999988888776552210 0 0 1357788888
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 503 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~ 503 (632)
+.+|. ++|+++.+ ++++|.+|++.|.++|++.|.++ .|.++|++|...
T Consensus 243 ~~~l~------------------------~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~-------~~~~~i~~~~~~ 290 (364)
T PLN02651 243 VVGLG------------------------AACELAMK-EMDYDEKHMKALRERLLNGLRAK-------LGGVRVNGPRDP 290 (364)
T ss_pred HHHHH------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhh-------CCCEEEECCCCc
Confidence 88888 99999987 56999999999999999999863 267999998543
Q ss_pred CC-CCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCC
Q 006746 504 FD-RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLG 582 (632)
Q Consensus 504 ~~-rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 582 (632)
.. +.+|++|++.+ ++++.|.+.+++ |.+++|++|+.+.... .+++++.... ....
T Consensus 291 ~~~~~~i~~~~~~~-----~~~~~~~~~L~~--i~v~~g~~c~~~~~~~-----~~~~~~~g~~------------~~~~ 346 (364)
T PLN02651 291 EKRYPGTLNLSFAY-----VEGESLLMGLKE--VAVSSGSACTSASLEP-----SYVLRALGVP------------EEMA 346 (364)
T ss_pred ccCcCCEEEEEeCC-----CCHHHHHHHhCC--EEEEchhhcCCCCCCc-----CHHHHHcCCC------------hHHh
Confidence 33 47799999976 678888776654 9999999999874322 1333332100 0123
Q ss_pred CcEEEEccCCCCCHHHHH
Q 006746 583 ITVVTASLGYLANFEDVY 600 (632)
Q Consensus 583 ~~~VRvSlg~~~t~eDV~ 600 (632)
.++||+|+|+|||+||||
T Consensus 347 ~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 347 HGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CceEEEEcCCCCCHHHcC
Confidence 479999999999999986
No 12
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-46 Score=390.93 Aligned_cols=372 Identities=18% Similarity=0.188 Sum_probs=294.2
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
.+.+|||+.++|+++..|++++..|+.. ..+|||+. .||.+....++++|+.||+++||+
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~~~~~-------------------~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd 101 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLPYLLE-------------------YLGNPHSR-SYGWKAEDAVEAAREQVAKLINAD 101 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHHHHHH-------------------hhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCC
Confidence 5799999999999999999999876532 12789988 688888888999999999999999
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCC----eEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVK----NLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd----~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
+.+ ||||+|+|+++|+++.+.+|..++ +|++.. +|++ ...|++ ..+..|++|+++|++ .++.++.+++++
T Consensus 102 ~~d--IiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~-v~~s~~-~l~~~g~~Vt~lpv~-~~~~~d~~~~~~ 176 (428)
T KOG1549|consen 102 PSD--IVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPC-VLDSCR-ALQEEGLEVTYLPVE-DSGLVDISKLRE 176 (428)
T ss_pred CCc--EEEeCCchHHHHHHHHHhhccccccccceEEEecccCcc-hhHHHH-HHHhcCeEEEEeccC-ccccccHHHHHH
Confidence 874 999999999999999999997777 777554 5655 677754 568899999999999 888899999999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCC
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGEN 340 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~ 340 (632)
.|+++| +||.+.+++|.+|+.+|++ |+++|++.|++|++||||++|+ +++|+.++++||+++|+|||||
T Consensus 177 ~i~~~T------~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~--i~vDV~eln~D~~s~s~HK~yg-- 246 (428)
T KOG1549|consen 177 AIRSKT------RLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGK--IPVDVQELNADFLSISAHKIYG-- 246 (428)
T ss_pred hcCCCc------eEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCC--ccccHHHcCchheeeecccccC--
Confidence 999865 9999999999999999999 9999999999999999999999 7999999999999999999999
Q ss_pred CCceEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCc
Q 006746 341 PSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKL 419 (632)
Q Consensus 341 P~G~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~ 419 (632)
|+|+|+||||+ .-.-.+.|.+.||... +. .++||.
T Consensus 247 p~~iGaLYvr~~~~~~~~~p~~~GGgq~-----r~---------------------------------------~rsGT~ 282 (428)
T KOG1549|consen 247 PPGIGALYVRRKRPRLRVEPPLSGGGQE-----RG---------------------------------------LRSGTV 282 (428)
T ss_pred CCcceEEEEccCCCcccccCcccCCccc-----cc---------------------------------------cccCCc
Confidence 88899999998 2222345666653311 00 135667
Q ss_pred ccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEEC
Q 006746 420 EQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYG 499 (632)
Q Consensus 420 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iyg 499 (632)
+.+.+.++. .|+++..+. +..+..+.+.+...+..++..- .+.+.++|
T Consensus 283 ~~~~~~~~g------------------------sA~e~~~~~-~~~~~~~~~~~~~~ll~~i~~~-------~~~~~~~G 330 (428)
T KOG1549|consen 283 ATPLAVGLG------------------------SAAEFVNKE-MAYDEAIIKRLSEKLLMGIGQS-------LPEVTLNG 330 (428)
T ss_pred CchhhhhhH------------------------HHHHHHHhh-cchhHHHHHHHHHHHHHHHhhh-------CchhhccC
Confidence 777788887 888888764 5566666666888887777652 26688888
Q ss_pred CCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccC
Q 006746 500 PKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKA 579 (632)
Q Consensus 500 p~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 579 (632)
+. +....+.++|++....|+.+ +.+...|.+++|..|.......+ -++.+...+ .
T Consensus 331 ~~-~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~l~s~~a~~~~~~eps-----y~l~~~G~~------------~ 385 (428)
T KOG1549|consen 331 SG-KSRYPGLVSLSFPYVEGESL-------LMDLKDVALSSGSACTSASLEPS-----YVLRAIGVD------------E 385 (428)
T ss_pred Cc-ccccccceeeecccccCcch-------hhhhhhhhhcccchhhcCCCCcc-----hhhhhcCcc------------h
Confidence 86 35578999999985444332 33445788888988876431111 112111100 1
Q ss_pred CCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhcc
Q 006746 580 NLGITVVTASLGYLANFEDVYRLWAFVAQFLDADF 614 (632)
Q Consensus 580 ~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f 614 (632)
......||+|+|.|||.+||+++++.++++...-|
T Consensus 386 ~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~ 420 (428)
T KOG1549|consen 386 DLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLR 420 (428)
T ss_pred hhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhcc
Confidence 23457999999999999999999999999876544
No 13
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=1.1e-44 Score=391.77 Aligned_cols=367 Identities=19% Similarity=0.172 Sum_probs=290.3
Q ss_pred eEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCC
Q 006746 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEND 189 (632)
Q Consensus 110 vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~e 189 (632)
+||||++++++|+.+++++.+++... .+|+++.+.++....+.++++|+.+++++|++++
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~- 60 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEY-------------------FGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD- 60 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhc-------------------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-
Confidence 69999999999999999987765321 1444433223334567899999999999999865
Q ss_pred ccEEEeCCHHHHHHHHHhhCC--CCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhc
Q 006746 190 YGMVFTANRTSAFKLLAESYP--FMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 266 (632)
Q Consensus 190 y~vvft~naT~al~lv~~sl~--~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~ 266 (632)
.|+||+|+|+|+++++.++- +.++++|++ ..+|++....| ..++++|++++.++.+ +++.++.+++++.|+++
T Consensus 61 -~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~--~~~~~~G~~v~~v~~~-~~g~~~~~~l~~~i~~~ 136 (379)
T TIGR03402 61 -EIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLC--QHLEKQGYKVTYLPVD-EEGRLDLEELRAAITDD 136 (379)
T ss_pred -eEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHH--HHHHHcCCEEEEEccC-CCCcCCHHHHHHhcCCC
Confidence 79999999999999988752 345677765 56888643333 3445689999999987 56789999999999764
Q ss_pred CcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceE
Q 006746 267 GKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFG 345 (632)
Q Consensus 267 ~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G 345 (632)
++++++++++|.||.++|++ |.++||++|+++++|++|++|+ .++|+..+++||+++|+||++| |.|+|
T Consensus 137 ------~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~G~g 206 (379)
T TIGR03402 137 ------TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGK--IPIDLKEMNIDMLSLSGHKLHG--PKGVG 206 (379)
T ss_pred ------cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccc--cccCcccCCCCEEEEcHHHcCC--CCceE
Confidence 48999999999999999999 9999999999999999999997 6999999999999999999888 99999
Q ss_pred EEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhh
Q 006746 346 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 425 (632)
Q Consensus 346 ~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~ 425 (632)
+||++++. .+.|...||... . . ++.||+|++.+.
T Consensus 207 ~l~v~~~~--~~~p~~~g~~~~------------~-------------~-------------------~~~gt~~~~~~~ 240 (379)
T TIGR03402 207 ALYIRKGT--RFRPLLRGGHQE------------R-------------G-------------------RRAGTENVPGIV 240 (379)
T ss_pred EEEECCCC--CCCCcccCCccC------------C-------------C-------------------cCCCCccHHHHH
Confidence 99999875 355544432210 0 0 135778888888
Q ss_pred HhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-cCCCCCCCCCcEEEECCCCCC
Q 006746 426 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK-LQHPNTEGNALVKIYGPKIRF 504 (632)
Q Consensus 426 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~-l~h~~~~G~p~v~Iygp~~~~ 504 (632)
++. ++++++.+ +++.+.+|.+.|.++|+++|.+ + |.++++++.. .
T Consensus 241 ~l~------------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~--------~~~~~~~~~~-~ 286 (379)
T TIGR03402 241 GLG------------------------KAAELATE-HLEEENTRVRALRDRLEAGLLARI--------PDARLNGDPT-K 286 (379)
T ss_pred HHH------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhC--------CCEEEeCCCc-c
Confidence 887 89999876 6899999999999999999986 6 6789999753 2
Q ss_pred CCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCc
Q 006746 505 DRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGIT 584 (632)
Q Consensus 505 ~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 584 (632)
..+++++|++.+ +++..|.+.++++||.+++|++|+.+..... ++++.... . .....+
T Consensus 287 ~~~~~~~~~~~~-----~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~-----~~~~~lg~--~----------~~~~~~ 344 (379)
T TIGR03402 287 RLPNTVNISFEY-----IEGEAILLLLDMEGICASSGSACTSGSLEPS-----HVLRAMGV--P----------HTAAHG 344 (379)
T ss_pred CCCCEEEEEecC-----CCHHHHHHhhccCCEEEEchhhcCCCCCCcC-----HHHHHcCC--C----------hhhcCc
Confidence 235799999976 6778888888889999999999998754321 22222110 0 112357
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 585 VVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 585 ~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.||+|+|+|||.|||++|++.|++.++.
T Consensus 345 ~vR~S~~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 345 SIRFSLSRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988764
No 14
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=3.4e-43 Score=380.67 Aligned_cols=367 Identities=17% Similarity=0.159 Sum_probs=290.5
Q ss_pred eEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC-CCC
Q 006746 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI-SEN 188 (632)
Q Consensus 110 vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a-~~~ 188 (632)
+||||+++++.++.+++++..++.. ..+||++.+.|+......++++|+++++.+|+ +++
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~-------------------~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ 61 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCD-------------------IYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLD 61 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHh-------------------cCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 6999999999999999998775532 12677766667766678889999999999998 444
Q ss_pred CccEEEeCCHHHHHHHHHhhCCC----CC-CCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHH
Q 006746 189 DYGMVFTANRTSAFKLLAESYPF----MS-VKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKM 262 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~~----~~-gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~ 262 (632)
+|+||+|+|+++++++.++.+ ++ +++|++ ..+|++....| ..++..|++++.++++ +++.++.++++++
T Consensus 62 --~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~--~~~~~~G~~v~~v~~~-~~g~~d~~~l~~~ 136 (382)
T TIGR03403 62 --DIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATC--AFLESLGVEVTYLPIN-EQGTITAEQVREA 136 (382)
T ss_pred --eEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHH--HHHHHCCCEEEEEecC-CCCCCCHHHHHHh
Confidence 799999999999999998742 45 456664 56888743333 3557799999999997 5678899999999
Q ss_pred HHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCC
Q 006746 263 VVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 263 i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
++++ ++++++++++|+||..+|++ |.++|+++|+++++|++|.+|. .++|+.++++|++++|+||++| |
T Consensus 137 i~~~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p 206 (382)
T TIGR03403 137 ITEK------TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGK--IPVDVQKAGVDFLSFSAHKFHG--P 206 (382)
T ss_pred cccC------CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCC--CccCccccCCCEEEEcchhhCC--C
Confidence 8764 38999999999999999999 9999999999999999999987 5899999999999999999998 9
Q ss_pred CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCccc
Q 006746 342 SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQ 421 (632)
Q Consensus 342 ~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~ 421 (632)
.|+|+||||++. .+.|.+.||. |. . . ++.||+|+
T Consensus 207 ~G~g~l~vr~~~--~~~p~~~g~~----------~~-~--------------~-------------------~~~gt~~~ 240 (382)
T TIGR03403 207 KGVGGLYIRKGV--ELTPLFHGGE----------HM-G--------------G-------------------RRSGTLNV 240 (382)
T ss_pred CceEEEEECCCC--CCCCcccCCC----------CC-C--------------C-------------------cccCCcCh
Confidence 999999999875 3555433321 10 0 0 13577788
Q ss_pred chhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCC
Q 006746 422 GEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 501 (632)
Q Consensus 422 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~ 501 (632)
+.+.++. .+|++..+ +++.+.+|++.|.++|++.|.++ |.++++++.
T Consensus 241 ~~~~al~------------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~--------~~~~~~~~~ 287 (382)
T TIGR03403 241 PYIVAMG------------------------EAMRLANE-YLDFEKSHVRRLRDRLEDALLEL--------PDVFVVGDR 287 (382)
T ss_pred HHHHHHH------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcC--------CCEEEECCC
Confidence 8888887 89988876 48999999999999999999987 679999985
Q ss_pred CCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCC
Q 006746 502 IRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 581 (632)
Q Consensus 502 ~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 581 (632)
. ...+++++|++.+ ++++.+.+.++++||.+|+|++|+....+.. .++.+... + ...
T Consensus 288 ~-~~~~~~~~~~~~~-----~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~-----~v~~~~g~--~----------~~~ 344 (382)
T TIGR03403 288 E-HRVPNTILISIKG-----VEGEAMLWDLNKAGIAASTGSACASEDLEAN-----PVMVAIGA--D----------KEL 344 (382)
T ss_pred C-CCcCCEEEEEeCC-----CCHHHHHHhhccCCEEEEchhccCCCCCCcC-----HHHHHcCC--C----------hHH
Confidence 3 2235699999876 6788887777889999999999987633221 22222110 0 012
Q ss_pred CCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 582 GITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 582 ~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..++||+|+|+|||++||++|+++|++.+..
T Consensus 345 ~~~~iR~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 345 AHTAIRLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred hCeeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999987654
No 15
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=1.2e-41 Score=371.32 Aligned_cols=367 Identities=17% Similarity=0.157 Sum_probs=280.7
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccc-cccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~-~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
+..+||||++.+++|+.+++++..++... .+|+++. ...+....+.++++|+.+++++|+
T Consensus 2 ~~~~yld~aa~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~ 62 (402)
T TIGR02006 2 KLPIYLDYAATTPVDPRVAEKMMPYLTEK-------------------FGNPASRSHSFGWEAEEAVENARNQVAELIGA 62 (402)
T ss_pred CccEEeeCCcCCCCCHHHHHHHHHHHHhc-------------------CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34799999999999999999987654321 1344421 111222357889999999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCC---CCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYP---FMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~---~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
+++ +|+||+|+|+++++++.++. +++|++|++ ..+|++....| ..+++.|++++.++.+ +++.+++++|++
T Consensus 63 ~~~--~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~--~~~~~~g~~v~~v~~~-~~~~~d~~~l~~ 137 (402)
T TIGR02006 63 DSR--EIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTC--RYLEREGFEVTYLPPK-SNGLIDLEELKA 137 (402)
T ss_pred CCC--eEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHH--HHHHhcCCEEEEEccC-CCCcCCHHHHHH
Confidence 875 69999999999999988763 467898765 46777633333 3346689999999987 677899999999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCC
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGEN 340 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~ 340 (632)
++.++ ++++++++++|+||..+|++ |.++||++|++++||++|++|. .++|+..+++|++++|+||++|
T Consensus 138 ~l~~~------~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~--~~~~~~~~~~D~~~~s~~K~~g-- 207 (402)
T TIGR02006 138 AIRDD------TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGK--IPINVNELKVDLMSISGHKIYG-- 207 (402)
T ss_pred hcCCC------CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCC--cccCccccCCCEEEEehhhhcC--
Confidence 88754 48999999999999999999 9999999999999999999998 6899999999999999999988
Q ss_pred CCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcc
Q 006746 341 PSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLE 420 (632)
Q Consensus 341 P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~ 420 (632)
|.|+|+||++++....+.+...||.. + ..+ +.||++
T Consensus 208 p~G~G~l~~~~~~~~~~~~~~~g~~~---------~----------------~~~-------------------~~gt~~ 243 (402)
T TIGR02006 208 PKGIGALYVRRKPRVRLEALIHGGGH---------E----------------RGM-------------------RSGTLP 243 (402)
T ss_pred CCceEEEEEccCCCCCCCceecCCCc---------c----------------CCc-------------------cCCCcc
Confidence 99999999999877666665443211 0 011 246677
Q ss_pred cchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECC
Q 006746 421 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGP 500 (632)
Q Consensus 421 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp 500 (632)
++.+.++. .+|+++.+ +++.+.+|.+.|.++|++.|.++ |.++++++
T Consensus 244 ~~~~~al~------------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~--------~~v~~~~~ 290 (402)
T TIGR02006 244 THQIVGMG------------------------EAFRIAKE-EMAQDTAHVLALRDRLLNGIKSI--------EEVYLNGD 290 (402)
T ss_pred HHHHHHHH------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcC--------CCEEEeCC
Confidence 77788887 89998875 79999999999999999999987 67899987
Q ss_pred CCCCCCC-c--EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccc
Q 006746 501 KIRFDRG-P--ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKD 577 (632)
Q Consensus 501 ~~~~~rg-~--ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 577 (632)
. ..|. + +++|+ . ++...+.+.+ ++|.+++|++|+++..... .++++..+.
T Consensus 291 ~--~~~~p~~~~v~f~--~-----~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~-----~~l~~lg~~----------- 343 (402)
T TIGR02006 291 L--EHRVPGNLNVSFN--Y-----VEGESLIMAL--KDLAVSSGSACTSASLEPS-----YVLRALGIN----------- 343 (402)
T ss_pred c--cccCCCeEEEEEe--C-----cCHHHHHHhc--CCEEEechhhcCCCCCCcc-----HHHHHcCCC-----------
Confidence 4 2343 3 45555 3 3444444333 5999999999987643221 122221100
Q ss_pred cCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 578 KANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 578 ~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....++||+|+|+|||.|||++|+++|+++++.
T Consensus 344 -~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~ 377 (402)
T TIGR02006 344 -DELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDK 377 (402)
T ss_pred -hhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 1123479999999999999999999999998765
No 16
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=3.9e-41 Score=365.98 Aligned_cols=377 Identities=19% Similarity=0.250 Sum_probs=291.0
Q ss_pred HHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHH
Q 006746 93 IDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLE 172 (632)
Q Consensus 93 ~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~ 172 (632)
+.++|+ +||.++....+|||++|.+++|+.+++++.+++.... .|+.+.+.......+.+
T Consensus 3 ~~~~r~-~f~~~~~~~~~yl~~~~~~~~p~~v~~a~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 62 (397)
T TIGR01976 3 VEAVRG-QFPALADGDRVFFDNPAGTQIPQSVADAVSAALTRSN-------------------ANRGGAYESSRRADQVV 62 (397)
T ss_pred hhHHHh-hCCcCCCCCeEEecCCccCCCCHHHHHHHHHHHHhcC-------------------CCCCCCchHHHHHHHHH
Confidence 456776 7998842126999999999999999999876543210 12211111111124678
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC--CCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY--PFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl--~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
+++|+.+++++|++++ .|+|++|+|++++++..++ .+++||+|++. .+|++....| ...+++.|++++.+++++
T Consensus 63 ~~l~~~ia~~~~~~~~--~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-~~~~~~~g~~~~~~~~~~ 139 (397)
T TIGR01976 63 DDAREAVADLLNADPP--EVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPW-LQAAERAGAKVKWARVDE 139 (397)
T ss_pred HHHHHHHHHHcCCCCC--eEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHH-HHHHHhcCCEEEEEeccc
Confidence 9999999999999865 5999999999999998887 57899997764 5787743344 466788999999999875
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcE
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDF 328 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df 328 (632)
+++.++.++++++|+++ ++++++++++|+||.++|++ |+++||++|+++++|++|++|. .++|+.++++|+
T Consensus 140 ~~~~~~~~~l~~~i~~~------~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~--~~~~~~~~~~d~ 211 (397)
T TIGR01976 140 ATGELHPDDLASLLSPR------TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPH--GLIDVQATGADF 211 (397)
T ss_pred cCCCcCHHHHHHhcCCC------ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccc--cCCCHHHcCCCE
Confidence 46789999999998754 48999999999999999999 9999999999999999999886 588888899999
Q ss_pred EEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCcc
Q 006746 329 LICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGP 408 (632)
Q Consensus 329 ~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~ 408 (632)
+++|+||++| |. +|+++++++.++.+.+.... |.... .+.++ +
T Consensus 212 ~~~s~~K~~g--~~-~G~l~~~~~~~~~l~~~~~~------------~~~~~----------~~~~~---~--------- 254 (397)
T TIGR01976 212 LTCSAYKFFG--PH-MGILWGRPELLMNLPPYKLT------------FSYDT----------GPERF---E--------- 254 (397)
T ss_pred EEEechhhcC--Cc-eEEEEEcHHHHhhCCCcccc------------CccCC----------Ccchh---c---------
Confidence 9999999999 74 99999999987777653211 10000 00111 2
Q ss_pred chhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC--------------HHHHHHHHHHHH
Q 006746 409 MSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG--------------LTMISRRGRCLI 474 (632)
Q Consensus 409 ~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G--------------l~~I~~r~~~L~ 474 (632)
.||++++.+.++. .|++++.++| ++.+.+|+..|.
T Consensus 255 -------~gt~~~~~~~~l~------------------------~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (397)
T TIGR01976 255 -------LGTPQYELLAGVV------------------------AAVDYLAGLGESANGSRRERLVASFQAIDAYENRLA 303 (397)
T ss_pred -------CCCCCHHHHHHHH------------------------HHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHH
Confidence 4556666677776 8999888876 788999999999
Q ss_pred HHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 475 NWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 475 ~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
+++++.|.++ +.++++++.+...++++++|++.+ +++..+.+.+.++||.+++|++|........
T Consensus 304 ~~l~~~L~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~-- 368 (397)
T TIGR01976 304 EYLLVGLSDL--------PGVTLYGVARLAARVPTVSFTVHG-----LPPQRVVRRLADQGIDAWAGHFYAVRLLRRL-- 368 (397)
T ss_pred HHHHHHHhcC--------CCEEEeCCCCccCCCceEEEEeCC-----cCHHHHHHHHHHCCeEEEeCccchHHHHHHh--
Confidence 9999999987 558999885445688999998865 4566676666778999999999987653322
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHH
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 606 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l 606 (632)
+ ...+.+.||||+|+|||.+||++|++.|
T Consensus 369 ------------~-----------~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 369 ------------G-----------LNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred ------------C-----------CCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 0 0113468999999999999999999864
No 17
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=4.7e-41 Score=367.18 Aligned_cols=384 Identities=14% Similarity=0.137 Sum_probs=277.2
Q ss_pred hhHHHHHHhhccCcCC---CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccc
Q 006746 91 YQIDQIRAKEYYQLSL---SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ 167 (632)
Q Consensus 91 ~~~d~iR~~ef~~L~~---~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~ 167 (632)
..++.+|+ +||.+.. ++.+|||+++.|+.|..+.+++..++.... .+.+..+..|..
T Consensus 8 ~~~~~~r~-~f~~~~~~~~~~~iyld~~a~g~~p~~v~~a~~~~~~~~~-------------------~~~~~~~~~~~~ 67 (406)
T TIGR01814 8 DPLRALRD-EFHLPKIGDENAVIYLDGNSLGLMPKAARNALKEELDKWA-------------------KIAIRGHNTGKA 67 (406)
T ss_pred ChHHHHHH-hcCCCcccCCCCcEEecCCCcCcCcHHHHHHHHHHHHHHH-------------------HhhhccCccCCC
Confidence 34667785 6996621 357999999999999999999876553211 011101111111
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC---eEEEe-ccccchhhHHHHHHHHhcCCEE-
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK---NLLTV-YDYESEAVEAMIRTSEKRGARV- 242 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd---~ilt~-~d~~s~~v~~~~~~a~~~G~~v- 242 (632)
......+.++++ +++|++++ +|+||+|+|+++++++.++ +++++ +|++. .+|+++...| ...+++.|+++
T Consensus 68 ~~~~~~~~~~~~-~l~g~~~~--~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~-~~~~~~~g~~~~ 142 (406)
T TIGR01814 68 PWFTLDESLLKL-RLVGAKED--EVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAI-ESQLQLHGLTVE 142 (406)
T ss_pred Chhhhhhhhccc-cccCCCCC--cEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHH-HHHHHhcCCCcc
Confidence 112223444445 89999876 7999999999999999998 55542 46654 6888755555 44567789987
Q ss_pred ---EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC
Q 006746 243 ---MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS 318 (632)
Q Consensus 243 ---~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ 318 (632)
+.++.+ .++.++++++++.+... .++++||+++|++|.||.++|++ |+++||++|++++||++|++|+ .+
T Consensus 143 ~~~~~~~~~-~~g~~~~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~--~~ 216 (406)
T TIGR01814 143 ESMVQIEPR-EEETLRLEDILDTIEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGN--VP 216 (406)
T ss_pred cceEEeccC-CCCccCHHHHHHHHHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCC--cc
Confidence 455554 45678999999888632 13579999999999999999999 9999999999999999999998 69
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCC--CceeecccccccccccccCCCCCCccccchhhh
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS--GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~g--G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
+|+..+++||+++|+|||++. |.| |++||+++....+.|...| +... .. .+.... .+.. .+.+
T Consensus 217 id~~~~gvD~~~~s~hK~l~g-~pG-~~l~v~~~~~~~~~p~~~g~~~~~~---~~--~~~~~~----~~~~--~~~~-- 281 (406)
T TIGR01814 217 LDLHDWGVDFACWCTYKYLNA-GPG-AGAFVHEKHAHTERPRLAGWWGHAR---PT--RFKMDN----TLGL--IPCG-- 281 (406)
T ss_pred cccccCCCCEEEEcCccccCC-CCC-eEEEEehhhhhhcCCCCCcccCCCC---cc--cccccc----ccCC--Cccc--
Confidence 999999999999999996643 449 8899988766566665444 1100 00 000000 0000 0000
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
.+.||+|++.+.++. ++|+++.++|++++.+|.+.|.++
T Consensus 282 -----------------~~~GT~~~~~~~~l~------------------------~al~~~~~~g~~~i~~~~~~l~~~ 320 (406)
T TIGR01814 282 -----------------FRISNPPILSVAALR------------------------GSLDIFDQAGMEALRKKSLLLTDY 320 (406)
T ss_pred -----------------eeeCCccHHHHHHHH------------------------HHHHHHHhcCHHHHHHHHHHHHHH
Confidence 146888999999997 999999999999999999999999
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhh
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 556 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~ 556 (632)
|++.|.++.- |.|.++|++|.....|+++++|.+. ++++.+.+.+.++||.+..
T Consensus 321 l~~~l~~~~~----~~~~~~i~~~~~~~~r~~~v~~~~~------~~~~~~~~~L~~~gi~v~~---------------- 374 (406)
T TIGR01814 321 LEELIKARCG----GPPVLTIITPRDHAQRGCQLSLTHP------VPGKAVFQALIKRGVIGDK---------------- 374 (406)
T ss_pred HHHHHHhhcC----CCCceEEeCCCChhhcCCeEEEEec------CCHHHHHHHHHHCCEEEec----------------
Confidence 9999987510 1356999998644457899999886 2345666656677987631
Q ss_pred hhhhhhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhh
Q 006746 557 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 557 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+.||+|+ |+|||.+||+++++.|++++|
T Consensus 375 ------------------------~~~~~iRiS~~~~~nt~~did~l~~~l~~~~~ 406 (406)
T TIGR01814 375 ------------------------REPSVIRVAPVPLYNTFVDVYDAVNVLEEILD 406 (406)
T ss_pred ------------------------cCCCeEEEechhccCCHHHHHHHHHHHHHHhC
Confidence 1235999999 799999999999999998875
No 18
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=3.2e-39 Score=349.38 Aligned_cols=369 Identities=16% Similarity=0.137 Sum_probs=281.0
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
++|||+++++++|+.+++++.+++.. .++|+++.+..|....++++++|+.+++++|++++
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~ 61 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQ-------------------YFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ 61 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHh-------------------cCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 48999999999999999998765432 11455544433444567899999999999999865
Q ss_pred CccEEEeCCHHHHHHHHHhhCC---CCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 189 DYGMVFTANRTSAFKLLAESYP---FMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~---~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
+|+||+|+|+++.+++.++- .++|++|++ ..+|++. ... ...++..|++++.++++ +++.+++++|++++.
T Consensus 62 --~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~-~~~-~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~ 136 (381)
T PRK02948 62 --GIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASI-HSY-FQSLESQGYTVTEIPVD-KSGLIRLVDLERAIT 136 (381)
T ss_pred --eEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHH-HHH-HHHHHhCCCEEEEEeeC-CCCCCCHHHHHHhcC
Confidence 79999999999998887762 256888765 4578763 333 34567789999999987 567899999999886
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG 343 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G 343 (632)
++ ++|+++++++|+||..+|++ |.++|+++|++++||++|.+|. .++|+..+++|++++|+||++| |.|
T Consensus 137 ~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~--~~~~~~~~~~d~~~~s~~K~~g--p~G 206 (381)
T PRK02948 137 PD------TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGK--LPIDVFEMGIDSLSVSAHKIYG--PKG 206 (381)
T ss_pred CC------CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccc--cccCcccCCCCEEEecHHhcCC--CCc
Confidence 54 48999999999999999999 9999999999999999999987 5889999999999999999999 889
Q ss_pred eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 344 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 344 ~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
+|++|++++. .+.+...++.. . ..+ +.||+|++.
T Consensus 207 ~G~l~~~~~~--~~~~~~~~~~~---------~----------------~~~-------------------~~~t~~~~~ 240 (381)
T PRK02948 207 VGAVYINPQV--RWKPVFPGTTH---------E----------------KGF-------------------RPGTVNVPG 240 (381)
T ss_pred EEEEEEcCCC--CCCCcccCCCC---------C----------------CCc-------------------CCCCccHHH
Confidence 9999999875 12222111100 0 001 256677888
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 503 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~ 503 (632)
+.++. .+|+.+.+ +++.+.+|++.|.++|++.|+++ |.. +.++++. .
T Consensus 241 ~~a~~------------------------~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~------~~~-v~~~~~~-~ 287 (381)
T PRK02948 241 IAAFL------------------------TAAENILK-NMQEESLRFKELRSYFLEQIQTL------PLP-IEVEGHS-T 287 (381)
T ss_pred HHHHH------------------------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC------CCC-EEEeCCC-c
Confidence 88887 88887754 58999999999999999999998 433 4455432 2
Q ss_pred CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCC
Q 006746 504 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 583 (632)
Q Consensus 504 ~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 583 (632)
.....+++|++.+ ++...+...++++||.++.|++|+.++.... .++.+... . .....
T Consensus 288 ~~~~~i~~~~~~~-----~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~-----~~~~~~~~-~-----------~~~~~ 345 (381)
T PRK02948 288 SCLPHIIGVTIKG-----IEGQYTMLECNRRGIAISTGSACQVGKQEPS-----KTMLAIGK-T-----------YEEAK 345 (381)
T ss_pred cCcCCEEEEEeCC-----CCHHHHHHhcccCCEEEEchHhcCCCCCCCC-----HHHHHcCC-C-----------hHHhC
Confidence 3356789999876 5667666666788999999999987643211 22222110 0 01124
Q ss_pred cEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 584 TVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 584 ~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.||+|+|+|||.|||++|++.|++.++.
T Consensus 346 ~~lRis~~~~~t~~di~~l~~~l~~~~~~ 374 (381)
T PRK02948 346 QFVRFSFGQQTTKDQIDTTIHALETIGNQ 374 (381)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999987653
No 19
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=1.3e-38 Score=343.34 Aligned_cols=370 Identities=19% Similarity=0.239 Sum_probs=281.8
Q ss_pred eEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccc-cccccchhHHHHHHHHHHHHHcCCCC
Q 006746 110 TCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGGQESGLESAMKKRIMDFLNISE 187 (632)
Q Consensus 110 vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~-~~~g~~~~~~~~~~R~~ia~~l~a~~ 187 (632)
||||+++.+ +.|..+++++.+++.... +|++.. +..+......++++|+.|++++|+++
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 61 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYG-------------------GSPGRGRYRLALRASREVEETRQLLAKLFNAPS 61 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcC-------------------CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 699999987 688899998766443210 111110 00001124678899999999999974
Q ss_pred CCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhc
Q 006746 188 NDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 266 (632)
Q Consensus 188 ~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~ 266 (632)
. ..|+||+|+|+++++++.++ +++|++|++ ..+|++ ....+...++..|++++.++.+ +++.++.++|+++++++
T Consensus 62 ~-~~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~~~~~ 137 (376)
T TIGR01977 62 S-AHVVFTNNATTALNIALKGL-LKEGDHVITTPMEHNS-VARPLECLKEQIGVEITIVKCD-NEGLISPERIKRAIKTN 137 (376)
T ss_pred C-CeEEEeCCHHHHHHHHHHhc-cCCCCEEEECcchhhH-HHHHHHHHHHHcCcEEEEEecC-CCCCcCHHHHHHhcCCC
Confidence 3 37999999999999999996 789999775 457765 3333355677789999999987 56778999999998654
Q ss_pred CcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceE
Q 006746 267 GKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFG 345 (632)
Q Consensus 267 ~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G 345 (632)
++++++++++|.||.++|++ |.++||++|+++++|++|++|. .++|+..+++||+++|+||+++. |.|+|
T Consensus 138 ------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~--~~~~~~~~~~D~~~~s~~K~l~~-p~g~g 208 (376)
T TIGR01977 138 ------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGV--IPIDMTELAIDMLAFTGHKGLLG-PQGTG 208 (376)
T ss_pred ------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCc--cCCCchhcCCCEEEecccccccC-CCCce
Confidence 48999999999999999999 9999999999999999999997 68999999999999999997654 99999
Q ss_pred EEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhh
Q 006746 346 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 425 (632)
Q Consensus 346 ~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~ 425 (632)
+++++++. .+++...+|... ...+|.... .+ +.++ +.||++++.+.
T Consensus 209 ~l~~~~~~--~~~~~~~~~~~~----~~~~~~~~~----~~-----~~r~-------------------~~~t~~~~~~~ 254 (376)
T TIGR01977 209 GLYIREGI--KLKPLKSGGTGS----HSALIDQPS----EL-----PDRF-------------------ESGTLNTPGIA 254 (376)
T ss_pred EEEEcCCc--CcCceecCCCcc----ccccccccc----cc-----hhhc-------------------cCCCCCHHHHH
Confidence 99999986 244433332210 001111000 00 0011 24567777788
Q ss_pred HhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCC
Q 006746 426 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 505 (632)
Q Consensus 426 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~ 505 (632)
++. ++|+++.++|++++.+|.+.|++++++.|.++ +.+++++|.+...
T Consensus 255 a~~------------------------~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~--------~~~~~~~~~~~~~ 302 (376)
T TIGR01977 255 GLN------------------------AGIKFIEKIGIANIAKKECMLTEKLLNGLREI--------NKVKIYGPADPAN 302 (376)
T ss_pred HHH------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC--------CCeEEeCCCCccc
Confidence 887 89999999999999999999999999999887 6689999865455
Q ss_pred CCcEEEEEEccCCCCccCHHHHHHHHHh-CCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCc
Q 006746 506 RGPALAFNVFDWKREKIEPVLVQKLADR-ENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGIT 584 (632)
Q Consensus 506 rg~ivaFnv~~~~G~~i~~~~V~kla~~-~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 584 (632)
++++++|++.+ +++..+.+.+.+ +||.++.|.+|..+..... +..+.+
T Consensus 303 ~~~~v~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~--------------------------g~~~~~ 351 (376)
T TIGR01977 303 RVGVVSFTVEG-----IDSEEVADILDEKFDIATRTGLHCAPLAHKTI--------------------------GTFATG 351 (376)
T ss_pred cCCeEEEEECC-----CCHHHHHHHHhccCCEEEEcccccchHHHHHh--------------------------CCCCCC
Confidence 78999999976 466667665554 5999999999987643221 122456
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHH
Q 006746 585 VVTASLGYLANFEDVYRLWAFVAQ 608 (632)
Q Consensus 585 ~VRvSlg~~~t~eDV~rlv~~l~~ 608 (632)
.||+|++.++|.+||++|+++|++
T Consensus 352 ~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 352 TIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred eEEEecCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999875
No 20
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=1.7e-37 Score=334.44 Aligned_cols=367 Identities=19% Similarity=0.247 Sum_probs=283.1
Q ss_pred eEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc-ccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 110 vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s-~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
+||||++.+++|+.+++++.+++... ++||++ .+..+....+.++++|+.+++++|++.
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~- 60 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHY-------------------NANVHRGVHELSARATDAYEAAREKVARFINAPS- 60 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhc-------------------CCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCC-
Confidence 59999999999999999987765321 134443 222233346788999999999999972
Q ss_pred CccEEEeCCHHHHHHHHHhhCCCC--CCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 189 DYGMVFTANRTSAFKLLAESYPFM--SVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~~~--~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
...|+||+|+|+|+++++.++... +|++|++ ..+|++. +..+...++..|++++.++.+ .++.++.++|++.+.+
T Consensus 61 ~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~-~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~l~~ 138 (373)
T cd06453 61 PDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSN-IVPWQQLAERTGAKLKVVPVD-DDGQLDLEALEKLLTE 138 (373)
T ss_pred CCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHH-HHHHHHHHhhcCcEEEEeecC-CCCCcCHHHHHHHhcC
Confidence 237999999999999999998654 8899775 4567653 333355667789999999998 6778999999999976
Q ss_pred cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCce
Q 006746 266 KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGF 344 (632)
Q Consensus 266 ~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~ 344 (632)
+ +++|++++++|+||...|++ |+++|+++|+++++|+++..|. .++++..+++|++++|+||++| |.|+
T Consensus 139 ~------~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~--~~g~ 208 (373)
T cd06453 139 R------TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGH--MPVDVQDLGCDFLAFSGHKMLG--PTGI 208 (373)
T ss_pred C------ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCc--eeeeccccCCCEEEeccccccC--CCCc
Confidence 4 48999999999999999999 9999999999999999998887 5788888899999999999999 5699
Q ss_pred EEEEEeCCCccccCCCCCCCce-eecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 345 GCLFVKKSTVPILVDNTSSGMV-SLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 345 G~L~Vr~~~~~~L~~~~~gG~v-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
|+++++++.++.+.+...||.. .........|. ..+.++ ..|++++..
T Consensus 209 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------~~~~~~-------------------~~~t~~~~~ 257 (373)
T cd06453 209 GVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYA------------DLPHKF-------------------EAGTPNIAG 257 (373)
T ss_pred EEEEEchHHhhcCCCeecCCCccccccccccccC------------CCcccc-------------------CCCCCCHHH
Confidence 9999999988888775444321 10000000000 000000 246677777
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 503 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~ 503 (632)
+.++. .+++.+.+.|++.+.+|.+.+.+++++.|.++ |.++++.+.
T Consensus 258 ~~al~------------------------~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~~~-- 303 (373)
T cd06453 258 AIGLG------------------------AAIDYLEKIGMEAIAAHEHELTAYALERLSEI--------PGVRVYGDA-- 303 (373)
T ss_pred HHHHH------------------------HHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC--------CCeEEeCCc--
Confidence 77776 89999998999999999999999999999887 668888653
Q ss_pred CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCC
Q 006746 504 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 583 (632)
Q Consensus 504 ~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 583 (632)
..+++++.|++.+ ++.+.+.+.+.++||.++.|..|..+..... + ..
T Consensus 304 ~~~~~~~~~~~~~-----~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~---------------------------~-~~ 350 (373)
T cd06453 304 EDRAGVVSFNLEG-----IHPHDVATILDQYGIAVRAGHHCAQPLMRRL---------------------------G-VP 350 (373)
T ss_pred cccCCeEEEEECC-----cCHHHHHHHHHHCCEEeccCccchhHHHHHh---------------------------C-CC
Confidence 3468899999876 4666777666779999999998887543211 0 23
Q ss_pred cEEEEccCCCCCHHHHHHHHHHH
Q 006746 584 TVVTASLGYLANFEDVYRLWAFV 606 (632)
Q Consensus 584 ~~VRvSlg~~~t~eDV~rlv~~l 606 (632)
+.||+|+|++||.+|+++|+++|
T Consensus 351 ~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 351 GTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CeEEEEecCCCCHHHHHHHHhhC
Confidence 69999999999999999999864
No 21
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=5.1e-37 Score=335.12 Aligned_cols=368 Identities=18% Similarity=0.161 Sum_probs=274.3
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccc-cccchhHHHHHHHHHHHHHcCCC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLL-HGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~-~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
..+||||++.+++|+.+++++..++.... .++|+++... .+....+.++++|+.+++++|++
T Consensus 3 ~~iyld~a~~~~~~~~v~~a~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~ 65 (404)
T PRK14012 3 LPIYLDYSATTPVDPRVAEKMMPYLTMDG-----------------TFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD 65 (404)
T ss_pred ceEEecCcCCCCCCHHHHHHHHHHHHhcc-----------------cCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 46999999999999999999876543110 0134443211 12223577899999999999998
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCC---CCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHH
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYP---FMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKM 262 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~---~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~ 262 (632)
++ +|+||+|+|+|+++++.++. +++||+|++ ..+|++....| . .+++.|++++.++++ +++.+++++|+++
T Consensus 66 ~~--~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~-~-~~~~~g~~~~~v~~~-~~g~~d~~~l~~~ 140 (404)
T PRK14012 66 PR--EIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTC-R-QLEREGFEVTYLDPQ-SNGIIDLEKLEAA 140 (404)
T ss_pred cC--eEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHH-H-HHHhCCCEEEEEccC-CCCcCCHHHHHHh
Confidence 65 69999999999999987763 578999765 56887643333 3 345679999999988 6788999999999
Q ss_pred HHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCC
Q 006746 263 VVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 263 i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
|++++ +++++++++|+||..+|++ |.++||++|+++++|++|++|. .++|+..+++|++++|+||++| |
T Consensus 141 i~~~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p 210 (404)
T PRK14012 141 MRDDT------ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGK--VPIDLSKLKVDLMSFSAHKIYG--P 210 (404)
T ss_pred cCCCC------EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCC--cccCcccCCCCEEEEehhhccC--C
Confidence 97654 8999999999999999999 9999999999999999999997 5788888999999999999998 8
Q ss_pred CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCccc
Q 006746 342 SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQ 421 (632)
Q Consensus 342 ~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~ 421 (632)
.|+|+||++++....+.+...||... .++ +.||+++
T Consensus 211 ~g~G~l~~~~~~~~~~~~~~~g~~~~-------------------------~~~-------------------~~gt~~~ 246 (404)
T PRK14012 211 KGIGALYVRRKPRVRLEAQMHGGGHE-------------------------RGM-------------------RSGTLPT 246 (404)
T ss_pred CceEEEEEecCCCCCCCceecCCCcc-------------------------CCc-------------------cCCCcCH
Confidence 89999999998765565544442110 001 1344555
Q ss_pred chhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCC
Q 006746 422 GEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 501 (632)
Q Consensus 422 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~ 501 (632)
+.+.++. ++++.++. +++.+.+|.+.|.+++.+.|.++ +.++++++.
T Consensus 247 ~~~~~l~------------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~--------~~i~~~~~~ 293 (404)
T PRK14012 247 HQIVGMG------------------------EAARIAKE-EMATENERIRALRDRLWNGIKDI--------EEVYLNGDL 293 (404)
T ss_pred HHHHHHH------------------------HHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcC--------CCEEEeCCc
Confidence 6667776 78887754 78889999999999999999887 668888763
Q ss_pred CCCCCC-c--EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccccc
Q 006746 502 IRFDRG-P--ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 578 (632)
Q Consensus 502 ~~~~rg-~--ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 578 (632)
. .+. + .++|++.+ ...+.+.+ ++|.+++|.+|.+...+.... +.. ++- .
T Consensus 294 ~--~~~~~~~~~~~~~~~-------~~~~~~~l--~~~~i~~g~~~~~~~~~~~~~-----~~~---~~~---------~ 345 (404)
T PRK14012 294 E--QRVPGNLNVSFNYVE-------GESLIMAL--KDLAVSSGSACTSASLEPSYV-----LRA---LGL---------N 345 (404)
T ss_pred c--ccCCCEEEEEEeCcC-------HHHHHHhC--CCeEEEchhhhCCCCCCCCHH-----HHH---cCC---------C
Confidence 2 232 2 45666533 23343333 489999999998754322210 110 000 0
Q ss_pred CCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 579 ANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 579 ~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....++||+|+|+++|.+||+++++.|++++..
T Consensus 346 ~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~ 379 (404)
T PRK14012 346 DELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGK 379 (404)
T ss_pred hhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 1224579999999999999999999999998765
No 22
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-37 Score=336.66 Aligned_cols=360 Identities=14% Similarity=0.114 Sum_probs=263.7
Q ss_pred ccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 101 YYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 101 f~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.|.|. ...+|||.+.+++.|..|++++..... ++.|. +....++++++|+.++
T Consensus 6 ~~~~~-~~~~~f~~Gp~~~~~~~v~~a~~~~~~----------------------~~~hr----~~~f~~~~~~~r~~l~ 58 (378)
T PRK03080 6 IPALR-PADPRFSSGPCKKRPGWQLEALADALL----------------------GRSHR----QKPVKALLKRVIEGTR 58 (378)
T ss_pred CCCcC-CCCCCcCCCCcCCChHHHHHHHHhhhc----------------------ccCcC----CHHHHHHHHHHHHHHH
Confidence 34553 558899999999999999999764221 11111 1124689999999999
Q ss_pred HHcCCCCCCccEEEeC-CHHHHHHHHHhhCCCCC-CCeEEEeccccchhhHHHHHHHHhcCC-EEEEEeccCCccccCHH
Q 006746 181 DFLNISENDYGMVFTA-NRTSAFKLLAESYPFMS-VKNLLTVYDYESEAVEAMIRTSEKRGA-RVMSAEFSWPRLRINSE 257 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~-naT~al~lv~~sl~~~~-gd~ilt~~d~~s~~v~~~~~~a~~~G~-~v~~v~~~~~~~~i~~~ 257 (632)
++||++ ++|+|+|++ |+|.+++.++.++ +++ ++.++...+|.+ .|....++++|+ +++.++.+| ...++++
T Consensus 59 ~l~~~~-~~~~v~~~~gs~T~~~~~~~~~l-~~~~~~~vi~~g~f~~---~~~~~~~~~~g~~~v~~~~~~~-g~~~d~~ 132 (378)
T PRK03080 59 ELLSLP-EGYEVGIVPGSDTGAWEMALWSL-LGARRVDHLAWESFGS---KWATDVVKQLKLEDPRVLEADY-GSLPDLS 132 (378)
T ss_pred HHhCCC-CCceEEEECCchHHHHHHHHHhc-CCCCcceEEEeCHHHH---HHHHHHHhhcCCCCceEeccCC-CCCCCHh
Confidence 999996 356899886 9999999999999 664 344555556654 454334577899 999998874 3456766
Q ss_pred HHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccc
Q 006746 258 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQI 336 (632)
Q Consensus 258 ~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~ 336 (632)
++. . +++|+++|++|.||.++|++ |++ |++|++++|||+|++|. .++|+++ +||+++|+|||
T Consensus 133 ~i~----~-------~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~--~pidv~~--iD~~~~s~~K~ 195 (378)
T PRK03080 133 AVD----F-------DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFA--LPLDWSK--LDVYTFSWQKV 195 (378)
T ss_pred hcC----C-------CCCEEEEecCCccceeccchhhcc--ccCCCeEEEeccccccc--CCCCHHH--CcEEEEehhhh
Confidence 532 2 25799999999999999999 988 88999999999999998 6999986 79999999998
Q ss_pred cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccc-cchhhhhhhccccCCCccchhhhhh
Q 006746 337 FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ-TSKSKQEKVAATNTFSGPMSIEMRQ 415 (632)
Q Consensus 337 ~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~e~e~gt~~f~~~~~~~~~~ 415 (632)
++. |.|+|+||+++++++.++|...|+.. +. ++ ++.... ..... ++.+|
T Consensus 196 l~~-P~G~g~l~v~~~~~~~~~p~~~~~~~---~~---~~--------~~~~~~~~~~~~--~~~~t------------- 245 (378)
T PRK03080 196 LGG-EGGHGMAILSPRAVERLESYTPARPI---PK---FF--------RLTKGGKAIENS--FKGQT------------- 245 (378)
T ss_pred CCC-CCceEEEEECHHHHHhhhcccCCCCC---ch---hh--------eeccchHHhhhh--hcCCc-------------
Confidence 765 89999999999999888775443111 00 11 000000 00000 12233
Q ss_pred cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCc
Q 006746 416 SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNAL 494 (632)
Q Consensus 416 ~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~ 494 (632)
.+|+++..++++. ++|+++.++ |++++.+|.+.|+++|++.|.++ +.
T Consensus 246 ~~tp~i~~i~~l~------------------------~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~--------~~ 293 (378)
T PRK03080 246 INTPSMLTVEDYL------------------------DQLDWANSIGGLDALIARTAANASVLYDWAEKT--------PW 293 (378)
T ss_pred ccCchHHHHHHHH------------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC--------CC
Confidence 2345666677777 999999998 89999999999999999999988 45
Q ss_pred EEEECCCCCCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccc
Q 006746 495 VKIYGPKIRFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDN 573 (632)
Q Consensus 495 v~Iygp~~~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 573 (632)
++++++.. ..|+ ++++|++.+.+ ..++...+.++++ +||.++.|.+|.
T Consensus 294 ~~~~~~~~-~~~s~~i~~~~~~~~~-~~~~~~~~~~l~~-~~i~v~~g~~~~---------------------------- 342 (378)
T PRK03080 294 ATPLVADP-ATRSNTSVTLDFVDAQ-AAVDAAAVAKLLR-ENGAVDIEPYRD---------------------------- 342 (378)
T ss_pred cccccCCc-cccCccEEEEEcCCch-HHHHHHHHHHHHH-cCCeeccccccC----------------------------
Confidence 77776532 3454 69999987621 0134556666664 589998774431
Q ss_pred cccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 574 NRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 574 ~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|+|+|||.+||++|+++|++.++
T Consensus 343 --------~~~~vRis~~~~~t~~di~~l~~al~~~~~ 372 (378)
T PRK03080 343 --------APNGLRIWCGPTVEPADVEALTPWLDWAFE 372 (378)
T ss_pred --------CCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 125899999999999999999999998765
No 23
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=5.5e-36 Score=320.85 Aligned_cols=319 Identities=19% Similarity=0.159 Sum_probs=250.6
Q ss_pred EeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccccc-ccccchhHHHHHHHHHHHHHcCCCCCC
Q 006746 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL-LHGGQESGLESAMKKRIMDFLNISEND 189 (632)
Q Consensus 111 yLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~-~~g~~~~~~~~~~R~~ia~~l~a~~~e 189 (632)
|||+++++++|+.+++++.+++... .+|+++.. .++....+.++++|+.+++++|++++
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~- 60 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEE-------------------FGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE- 60 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhc-------------------CCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-
Confidence 8999999999999999987754311 13444321 12333457889999999999999876
Q ss_pred ccEEEeCCHHHHHHHHHhhCC---CCCC-CeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 190 YGMVFTANRTSAFKLLAESYP---FMSV-KNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 190 y~vvft~naT~al~lv~~sl~---~~~g-d~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
+|+||+|+|+|+++++.++. +.+| ++|++ ..+|++....| ..++..|++++.++++ +++.+++++|+++++
T Consensus 61 -~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~--~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~ 136 (353)
T TIGR03235 61 -EVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPI--RALERNGFTVTYLPVD-ESGRIDVDELADAIR 136 (353)
T ss_pred -eEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHH--HHHHhcCCEEEEEccC-CCCcCCHHHHHHhCC
Confidence 69999999999999988872 2456 56654 56787643333 3346689999999987 567799999999886
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG 343 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G 343 (632)
++ ++++++++++|.||..+|++ |+++|+++|++++||++|.+|. .++|++.+++|++++|+||++| |.|
T Consensus 137 ~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~g 206 (353)
T TIGR03235 137 PD------TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGK--ITVDLSADRIDLISCSGHKIYG--PKG 206 (353)
T ss_pred CC------CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCC--ccccccccCCCEEEeehhhcCC--CCc
Confidence 54 48999999999999999999 9999999999999999999998 6899999999999999999988 899
Q ss_pred eEEEEEeCCCccc--cCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCccc
Q 006746 344 FGCLFVKKSTVPI--LVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQ 421 (632)
Q Consensus 344 ~G~L~Vr~~~~~~--L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~ 421 (632)
+|+||++++.+.. ++|.+++|.. + ..+ +.||+++
T Consensus 207 ~g~l~~~~~~~~~~~~~~~~~~~~~---------~----------------~~~-------------------~~gt~~~ 242 (353)
T TIGR03235 207 IGALVIRKRGKPKAPLKPIMFGGGQ---------E----------------RGL-------------------RPGTLPV 242 (353)
T ss_pred eEEEEEccCcccccccCceeeCCCC---------c----------------Ccc-------------------ccCCCCh
Confidence 9999999986432 3433332110 0 001 2566777
Q ss_pred chhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCC
Q 006746 422 GEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 501 (632)
Q Consensus 422 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~ 501 (632)
+.+.++. ++|+++. .|++++.+|++.|.++|++.|.++ .++++++.
T Consensus 243 ~~~~al~------------------------~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~---------g~~~~~~~ 288 (353)
T TIGR03235 243 HLIVGMG------------------------EAAEIAR-RNAQAWEVKLRAMRNQLRDALQTL---------GVKLNGDP 288 (353)
T ss_pred HHHHHHH------------------------HHHHHHH-hhHHHHHHHHHHHHHHHHHHhccC---------CeEEeCCc
Confidence 7888887 8999876 489999999999999999999764 37888865
Q ss_pred CCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 502 IRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 502 ~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
. ..+.++++|++.+ ++.+.|.+.+.+ +|.+++|..|..+.
T Consensus 289 ~-~~~~~i~~~~~~~-----~~~~~v~~~L~~-~i~v~~g~~~~~~~ 328 (353)
T TIGR03235 289 A-ETIPHILNFSIDG-----VNSEALIVNLRA-DAAVSTGSACSSSK 328 (353)
T ss_pred c-cccCCEEEEEeCC-----cCHHHHHHHHhC-CeEEEchhhcCCCC
Confidence 3 3457899999876 677778777754 89999999997653
No 24
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=7.5e-36 Score=320.73 Aligned_cols=337 Identities=14% Similarity=0.169 Sum_probs=235.8
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccc----cccchhHHHHHHHHHHHHHcCCCCCC
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLL----HGGQESGLESAMKKRIMDFLNISEND 189 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~----~g~~~~~~~~~~R~~ia~~l~a~~~e 189 (632)
++|-.+.|+.|++++.+++... +|++.... ......++++++|++++++||++ ++
T Consensus 4 ~pGp~~~p~~V~~a~~~~~~~~--------------------~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~-~~ 62 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLDF--------------------NGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIP-DN 62 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHhhc--------------------ccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CC
Confidence 3677899999999988765321 11111100 01223588999999999999984 45
Q ss_pred ccEEEeCC-HHHHHHHHHhhC--CCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCcccc-C-HHHHHHHH
Q 006746 190 YGMVFTAN-RTSAFKLLAESY--PFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRI-N-SEKLRKMV 263 (632)
Q Consensus 190 y~vvft~n-aT~al~lv~~sl--~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i-~-~~~l~~~i 263 (632)
++|+||+| +|+|+++++.++ +++++++|++ .+++. | .+.++++|++++.++.+ +++.. + .+..+..+
T Consensus 63 ~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~~~~~-----~-~~~a~~~g~~~~~~~~~-~~g~~~~~~~~~~~~~ 135 (355)
T cd00611 63 YKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAK-----A-AKEAKRYGGVVVIVAAK-EEGKYTKIPDVETWDL 135 (355)
T ss_pred ceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH-----H-HHHHHhcCCCcEEEecc-cccCCCCCCCHhhcCC
Confidence 68999988 999999999999 2235555543 23332 2 45778999999999875 22212 3 22222223
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG 343 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G 343 (632)
++ ++++|+++|++|.||.+++ ++++.+|++++|||+|++|+ .++|++++++ +++|+||+|| |.|
T Consensus 136 ~~------~~~lV~~~h~~t~tG~~~~----~i~~~~g~~~~VDa~qs~g~--~~idv~~~~~--~~ss~~K~lG--P~G 199 (355)
T cd00611 136 AP------DAAYVHYCSNETIHGVEFD----EVPDTGGVPLVADMSSNILS--RPIDVSKFGV--IYAGAQKNLG--PAG 199 (355)
T ss_pred CC------CCCEEEEeCCcccccEEcc----eecccCCCeEEEEccccccC--CCCCHHHhCE--EEeecccccC--CCc
Confidence 32 4689999999999999854 34455899999999999998 6999988764 5577999999 889
Q ss_pred eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 344 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 344 ~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
+|+||+|+++++++.+.... .. .++ ... ..+ + ..||||++.
T Consensus 200 ~g~l~~~~~~~~~~~~~~~~-~~-------~~~-----------------~~~--~~~--~----------~~~Tpn~~~ 240 (355)
T cd00611 200 VTVVIVRKDLLGKARKITPS-ML-------NYK-----------------THA--DNN--S----------LYNTPPTFA 240 (355)
T ss_pred eEEEEECHHHHhhcccCCCC-cc-------cHH-----------------HHH--hcC--C----------CCCCChHHH
Confidence 99999999998877653211 00 000 000 000 0 157899999
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEE-CCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY-GPK 501 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iy-gp~ 501 (632)
|++|. ++|+++.++ |+++|.+|.+.|+++|++.|.++ |. +| ++.
T Consensus 241 i~~L~------------------------aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~--------~g--l~~~~~ 286 (355)
T cd00611 241 IYMMG------------------------LVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNS--------NG--FYRGPV 286 (355)
T ss_pred HHHHH------------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC--------cc--ccccCC
Confidence 99998 999999999 79999999999999999999998 44 35 333
Q ss_pred CCCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCC
Q 006746 502 IRFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 580 (632)
Q Consensus 502 ~~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 580 (632)
++..|. .+++|++.+. .+. ....+.+.+.||++..|.
T Consensus 287 ~~~~rs~~vvsf~~~~~---~l~-~~~~~~~~r~G~~~~~~~-------------------------------------- 324 (355)
T cd00611 287 DKRARSRMNVPFRLGKE---ELE-KEFLKEAEAAGMIGLKGH-------------------------------------- 324 (355)
T ss_pred CHHHcCceEEEEEcCCh---hhh-HHHHHHHHHCCCcccCCC--------------------------------------
Confidence 223466 5699998872 011 122122333455432220
Q ss_pred CCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 581 LGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 581 ~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
...|.||+|+++|||.|||++|+++|+++
T Consensus 325 ~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 325 RSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 11369999999999999999999999985
No 25
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=8.8e-34 Score=309.50 Aligned_cols=360 Identities=14% Similarity=0.064 Sum_probs=277.7
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
+...||...|-...++.+++++...+..+ . +....++++++|+.+++++|++
T Consensus 7 ~~~~~l~~pGP~~~~~~V~~a~~~~~~~~----------------------~------~~~~~~~~~~~~~~l~~~~g~~ 58 (401)
T PLN02409 7 PGRNHLFVPGPVNIPERVLRAMNRPNEDH----------------------R------SPAFPALTKELLEDVKYIFKTK 58 (401)
T ss_pred CCCceeccCCCCCCCHHHHHHhcCCCCCC----------------------C------CHHHHHHHHHHHHHHHHHhCCC
Confidence 45778999999999999999976532100 0 1113578999999999999997
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
+ ++.++|++++|+++..++.++ +++||+|++ ..+|++ ..| .+.+++.|++++.++.++.. .++.++|++++++
T Consensus 59 ~-~~~vi~~~~gt~a~~~a~~~~-~~~Gd~Vlv~~~~~~~--~~~-~~~~~~~g~~v~~v~~~~~~-~~~~~~l~~~l~~ 132 (401)
T PLN02409 59 S-GTPFIFPTTGTGAWESALTNT-LSPGDKVVSFRIGQFS--LLW-IDQMQRLNFDVDVVESPWGQ-GADLDILKSKLRQ 132 (401)
T ss_pred C-CCEEEEeCCcHHHHHHHHHhc-CCCCCEEEEeCCCchh--HHH-HHHHHHcCCceEEEECCCCC-CCCHHHHHHHHhh
Confidence 5 347999999999999999887 899999764 557875 345 46778899999999998543 4899999999986
Q ss_pred cCcCCCceeEEEEeccCCCCccccchH-HHHH--HhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCC
Q 006746 266 KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRI--AQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPS 342 (632)
Q Consensus 266 ~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~--a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~ 342 (632)
.+ .+++++++++|++|.||.++|++ |.++ ||++|++++||++|++|. .++|+.++++||+++|+||+++. |.
T Consensus 133 ~~--~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~--~~id~~~~~~D~~~~s~~K~l~~-P~ 207 (401)
T PLN02409 133 DT--NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGA--LDFRMDEWGVDVALTGSQKALSL-PT 207 (401)
T ss_pred Cc--CCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCC--ccccccccCccEEEEcCccccCc-CC
Confidence 31 12469999999999999999999 9999 999999999999999987 68999999999999999997765 88
Q ss_pred ceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccc
Q 006746 343 GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 422 (632)
Q Consensus 343 G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~ 422 (632)
|+|+|++++++++.+.+...... . ..|... ..+. +.|+ +..+|++++
T Consensus 208 G~G~l~~~~~~~~~~~~~~~~~~---~----~~~~~~-------------~~~~--~~g~-----------~~~~Tp~~~ 254 (401)
T PLN02409 208 GLGIVCASPKALEASKTAKSPRV---F----FDWADY-------------LKFY--KLGT-----------YWPYTPSIQ 254 (401)
T ss_pred CcceeEECHHHHHHHhcCCCCCe---e----cCHHHH-------------HHHH--hcCC-----------CCCCCccHH
Confidence 99999999998877655311100 0 001000 0010 1121 014568888
Q ss_pred hhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCC
Q 006746 423 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI 502 (632)
Q Consensus 423 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~ 502 (632)
.++++. .+|+++.++|++++.+|.+.|.++|++.|.++ | ++++++..
T Consensus 255 ~~~al~------------------------~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~------g---~~~~~~~~ 301 (401)
T PLN02409 255 LLYGLR------------------------AALDLIFEEGLENVIARHARLGEATRLAVEAW------G---LKLCTKKP 301 (401)
T ss_pred HHHHHH------------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc------C---CeeccCCh
Confidence 899998 99999999999999999999999999999887 4 67788642
Q ss_pred CCCCC-cEEEEEEccCCCCccCHHHH-HHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCC
Q 006746 503 RFDRG-PALAFNVFDWKREKIEPVLV-QKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 580 (632)
Q Consensus 503 ~~~rg-~ivaFnv~~~~G~~i~~~~V-~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 580 (632)
..|. .+++|++++ | ++...+ +++++++||.++.|. +.
T Consensus 302 -~~~s~~v~~~~~p~--~--~~~~~l~~~l~~~~~i~i~~G~------------------------------------~~ 340 (401)
T PLN02409 302 -EWRSDTVTAVVVPE--G--IDSAEIVKNAWKKYNLSLGLGL------------------------------------NK 340 (401)
T ss_pred -hhcccceEEEeCCC--C--CCHHHHHHHHHHhCCEEEEcCC------------------------------------Cc
Confidence 3455 456677653 1 566555 467788999998772 11
Q ss_pred CCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 581 LGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 581 ~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||||...|+|.+||.+++++|.+.|.+
T Consensus 341 ~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 341 VAGKVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 13468999999999999999999999997765
No 26
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=4.3e-33 Score=298.35 Aligned_cols=304 Identities=14% Similarity=0.145 Sum_probs=228.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCC-HHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTAN-RTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~n-aT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.++++++|+.++++|+++ ++|+|+|++| +|.|++.++.++ +.+|++++ .....++ ..| .+.+++.|+ +..+.
T Consensus 36 ~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl-~~~~~~~l~i~~G~fg--~r~-~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 36 EAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNL-LAEGKVADYIVTGAWS--KKA-AKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhc-CCCCCeEEEEECCHHH--HHH-HHHHHHhCC-cEEEe
Confidence 489999999999999984 4578888876 999999999999 55788854 4455543 233 788999999 77777
Q ss_pred cc----CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCC
Q 006746 247 FS----WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLS 322 (632)
Q Consensus 247 ~~----~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls 322 (632)
.+ |.+ .+++++++ ++ +++++|+++|+++.||+.+| ++++.++++++|||+|++|+ .++|++
T Consensus 110 ~~~~~~~~~-~~~~~~~~--~~------~~~~~v~~th~ETstGv~~~----~l~~~~~~l~iVDavss~g~--~~id~~ 174 (349)
T TIGR01364 110 SGKEGNYTK-IPDPSTWE--IS------EDAAYVHYCANETIHGVEFR----ELPDVKNAPLVADMSSNILS--RPIDVS 174 (349)
T ss_pred ccccCCCCC-CCCHHhcC--CC------CCCCEEEEcCCCCcccEecc----eecccCCCeEEEEccccccC--ccCCHH
Confidence 53 211 34555544 11 24789999999999999988 56677899999999999998 699998
Q ss_pred CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccc
Q 006746 323 LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 402 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt 402 (632)
++ ||+++|+||++| |+|+|++++++++++++++... .. .+++ ... ..++
T Consensus 175 ~~--d~~~~ssqK~lg--P~Glg~l~~s~~~~~~~~~~~~-~~-------~~~~-----------------~~~--~~~~ 223 (349)
T TIGR01364 175 KF--GLIYAGAQKNIG--PAGLTVVIVRKDLLGRASRITP-SM-------LNYK-----------------IHA--ENDS 223 (349)
T ss_pred Hc--cEEEEecccccC--CCceEEEEECHHHHhhcccCCC-Cc-------chHH-----------------HHH--hcCC
Confidence 75 599999999999 8899999999999987766311 00 0010 000 0111
Q ss_pred cCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHH
Q 006746 403 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 403 ~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L 481 (632)
..||||++.|++|. ++|+++.++ |+++|.+|.+.|+++|++.|
T Consensus 224 ------------~~~Tp~~~~i~al~------------------------~al~~l~~~gG~e~i~~r~~~l~~~l~~~l 267 (349)
T TIGR01364 224 ------------MYNTPPTFAIYVSG------------------------LVFKWLKEQGGVKAIEKRNQAKAQLLYDTI 267 (349)
T ss_pred ------------CCCCCcHHHHHHHH------------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 14789999999998 999999999 79999999999999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
.++ +.+.++.. .+..|+ .+++|++.+. .+. ..+.+.+.+.||++..|..
T Consensus 268 ~~~--------~gl~~~~~-~~~~rs~~v~sf~~~~~---~~~-~~~~~~~~~~Gi~~~~~~~----------------- 317 (349)
T TIGR01364 268 DNS--------NGFYRNPV-DPRNRSRMNVVFTLGNE---ELE-KRFLKEAEERGLVSLKGHR----------------- 317 (349)
T ss_pred HhC--------CCeeccCC-CHHHcCCeEEEEecCCh---hHh-HHHHHHHHHCCCcccCCcc-----------------
Confidence 998 44433332 122355 6799998863 122 3333355567776554310
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|+++|||.|||++|+++|++++.
T Consensus 318 ---------------------~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 318 ---------------------SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ---------------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 136999999999999999999999998764
No 27
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=100.00 E-value=1.2e-32 Score=296.24 Aligned_cols=346 Identities=13% Similarity=0.105 Sum_probs=245.6
Q ss_pred eEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccc-ccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNL-KTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 110 vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~-~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
.+|=+.|-...|+.|++++...+.... + . +.+.+ -++ ....-.++++++|++++++||++ +
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~-~--------~------~~g~~~~~h--r~~~f~~~~~~~~~~l~~l~~~~-~ 65 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWN-G--------S------GMSVMEISH--RSKEFEAVAEEAEADLRELLNIP-D 65 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccc-c--------C------CccccccCC--CCHHHHHHHHHHHHHHHHHhCCC-C
Confidence 345568899999999999876542110 0 0 00110 001 11122489999999999999984 3
Q ss_pred CccEEEe-CCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH-HHHh
Q 006746 189 DYGMVFT-ANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK-MVVS 265 (632)
Q Consensus 189 ey~vvft-~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~-~i~~ 265 (632)
+|+|+|+ +++|.|+..+..++ +.+|++++ ......+ ..| .+.+++.|.. ..+..++..+..+..++++ +|++
T Consensus 66 ~~~v~~~~gsgt~~~Ea~~~nl-~~~g~~~l~i~~G~fg--~r~-~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~ 140 (360)
T PRK05355 66 NYKVLFLQGGASLQFAMVPMNL-LGGGKKADYVDTGSWS--KKA-IKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSD 140 (360)
T ss_pred CcEEEEEcCCchHHHHHHHHhc-CCCCCeEEEEECCHHH--HHH-HHHHHHhCCc-eEEecccccCCCCCCChhhccCCC
Confidence 4566666 67889999999998 67888854 4444433 223 6788999975 6666653344555445554 5543
Q ss_pred cCcCCCceeEEEEeccCCCCcccc-chH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc
Q 006746 266 KGKKKKQRGLFVFPLHSRMTGARY-PYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG 343 (632)
Q Consensus 266 ~~~~~~~~~Lv~~~~~sn~TG~~~-pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G 343 (632)
++++|+++|+++.||+.+ |+. + +|++++|||+|++|+ .++|++++ ||+++|+||++| |+|
T Consensus 141 ------~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~--~~idv~~~--d~~~~ssqK~lg--P~G 202 (360)
T PRK05355 141 ------DAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILS--RPIDVSKF--GLIYAGAQKNIG--PAG 202 (360)
T ss_pred ------CCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccC--ccCCHHHc--cEEEEecccccc--CCc
Confidence 358999999999999999 777 5 799999999999998 69999876 699999999999 889
Q ss_pred eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 344 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 344 ~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
+|+||+|+++++++.+.. ++..+ | . ... .... ..||||++.
T Consensus 203 lg~l~~s~~~l~~~~~~~-~~~~~--------~--~--------------~~~--~~~~------------~~~Tp~~~~ 243 (360)
T PRK05355 203 LTIVIVREDLLGRALPSI-PSMLD--------Y--K--------------THA--DNDS------------MYNTPPTFA 243 (360)
T ss_pred eEEEEECHHHHhhcccCC-ChHHH--------H--H--------------HHH--hcCC------------ccCCCcHHH
Confidence 999999999998876631 21111 0 0 000 0000 157899999
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI 502 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~ 502 (632)
+++|. ++|+++.++ |+++|.+|.+.|++++++.|+++ +++..+.+.
T Consensus 244 i~aL~------------------------~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~--------~~~~~~~~~- 290 (360)
T PRK05355 244 IYLAG------------------------LVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSS--------DFYRNPVAP- 290 (360)
T ss_pred HHHHH------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC--------CCcccCCCh-
Confidence 99998 999999999 89999999999999999999998 333333221
Q ss_pred CCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCC
Q 006746 503 RFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 581 (632)
Q Consensus 503 ~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 581 (632)
..|+ .+++|++++. +....+.+.+.+.||.+..|. .
T Consensus 291 -~~rs~~v~sf~~~~~----~~~~~~~~~~~~~Gi~~~~~~--------------------------------------~ 327 (360)
T PRK05355 291 -EDRSRMNVPFTLADE----ELDKKFLAEAKAAGLVGLKGH--------------------------------------R 327 (360)
T ss_pred -hhcCCcEEEEEcCCh----HHHHHHHHHHHHCCCcccCCC--------------------------------------C
Confidence 2355 6799998772 222333333444566543321 0
Q ss_pred CCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 582 GITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 582 ~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..|.||+|+++|||.|||++|+++|++++.
T Consensus 328 ~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 328 SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 136899999999999999999999999764
No 28
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=4e-31 Score=284.31 Aligned_cols=324 Identities=12% Similarity=0.096 Sum_probs=240.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCe-EEEeccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKN-LLTVYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~-ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.++++|+.+++++|+++++..|+||+|+|+|++.++.++ +.+|++ |++...++. . .+...+++.|++++.++.
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l-~~~~~~vlv~~~~~~~-~--~~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA-VPKDGKLLVVINGAYG-A--RIVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc-CCCCCeEEEEeCChhh-H--HHHHHHHHcCCceEEEeC
Confidence 57889999999999999764447999999999999999999 456666 444444432 1 124567889999999998
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
+ +++.++++++++++.+++ ++++++++|++|.||.++|++ |+++||++|++++||++|++|. .++|+..+++
T Consensus 110 ~-~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~--~~~~~~~~~~ 182 (363)
T TIGR02326 110 G-EVEPPDVVEVEAILAADP----AITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGG--IPIDIAELHI 182 (363)
T ss_pred C-CCCCCCHHHHHHHHhhCC----CccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccC--cccchhhcCc
Confidence 7 566789999999987532 457899999999999999999 9999999999999999999987 5899999999
Q ss_pred cEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCC
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 406 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~ 406 (632)
||+++|+||+++. |.|+|+|+++++.++.+.+...+ . .. .....|. ..+...+..
T Consensus 183 D~~~~s~~K~l~~-p~G~G~l~~~~~~~~~~~~~~~~-~-~~--~~~~~~~-----------------~~~~~~~~~--- 237 (363)
T TIGR02326 183 DYLISSANKCIQG-VPGFGFVIARQAELAACKGNARS-L-SL--DLYDQWR-----------------CMEDNHGKW--- 237 (363)
T ss_pred cEEEecCcccccc-CCcceEEEECHHHHHHhhcCCCc-e-ee--cHHHHHH-----------------HHhccCCCC---
Confidence 9999999996643 88999999999887665432211 0 00 0000110 000001111
Q ss_pred ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccC
Q 006746 407 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQ 485 (632)
Q Consensus 407 ~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~ 485 (632)
..|++++.+.++. ++|+.+... |++++.+|.+.+.+++++.|.++
T Consensus 238 ---------~ft~~~~~~~al~------------------------~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~- 283 (363)
T TIGR02326 238 ---------RFTSPTHVVHAFA------------------------QALLELEKEGGVAARHQRYQQNQKTLVAGMRAL- 283 (363)
T ss_pred ---------CCCCcHHHHHHHH------------------------HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-
Confidence 1234566777776 889887655 69999999999999999999887
Q ss_pred CCCCCCCCcEEEECCCCCCCCCcE-EEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhh
Q 006746 486 HPNTEGNALVKIYGPKIRFDRGPA-LAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 564 (632)
Q Consensus 486 h~~~~G~p~v~Iygp~~~~~rg~i-vaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~ 564 (632)
| ++++.+. ..++++ ++|.+.+. ..++...+.+.+.++||.++.|..
T Consensus 284 -----g---~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~v~~~L~~~gi~v~~g~~--------------------- 330 (363)
T TIGR02326 284 -----G---FEPLLDD--EIQSPIITSFYSPED--PDYRFADFYQRLKEQGFVIYPGKV--------------------- 330 (363)
T ss_pred -----C---CeeccCc--ccCCceEEEEECCCC--CCCCHHHHHHHHHHCCEEEECCcC---------------------
Confidence 4 3455553 235555 46666541 114556676666778999986621
Q ss_pred ccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 565 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.....||+|++.+++.|||+++++.|++.|+
T Consensus 331 ----------------~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 331 ----------------SQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred ----------------CCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 1125899998888999999999999998764
No 29
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=1.7e-30 Score=278.24 Aligned_cols=348 Identities=14% Similarity=0.099 Sum_probs=256.8
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCccEE
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGMV 193 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vv 193 (632)
++|-.+.|..+++++.+.+.. + .+....++++++|+.+++++|+++ ++.++
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~----------------------~------~~~~~~~~~~~~~~~la~~~g~~~-~~~~~ 54 (356)
T cd06451 4 IPGPSNVPPRVLKAMNRPMLG----------------------H------RSPEFLALMDEILEGLRYVFQTEN-GLTFL 54 (356)
T ss_pred cCCCcCCCHHHHHHhCCCccC----------------------C------CCHHHHHHHHHHHHHHHHHhcCCC-CCEEE
Confidence 467778889999997543210 0 011134678899999999999954 34688
Q ss_pred EeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCc
Q 006746 194 FTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQ 272 (632)
Q Consensus 194 ft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~ 272 (632)
+|+|+|+|+++++.++ ..+|++|++. ..|+++ .+ ...++..|++++.++.+ +++.++.+++++.+++. +
T Consensus 55 ~~~~~t~al~~~~~~~-~~~g~~vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~i~~~-----~ 124 (356)
T cd06451 55 LSGSGTGAMEAALSNL-LEPGDKVLVGVNGVFGD--RW-ADMAERYGADVDVVEKP-WGEAVSPEEIAEALEQH-----D 124 (356)
T ss_pred EecCcHHHHHHHHHHh-CCCCCEEEEecCCchhH--HH-HHHHHHhCCCeEEeecC-CCCCCCHHHHHHHHhcc-----C
Confidence 9999999999999999 5789998755 455542 23 35667889999999987 45678999999999751 2
Q ss_pred eeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeC
Q 006746 273 RGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 273 ~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
++++.+++++|.||.+.|++ |.++|+++|+++++|++|.+|. .++++..+++|++++|+||+||. |.|+|+|++++
T Consensus 125 ~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~--~~~~~~~~~~d~~~~s~~K~l~~-p~g~G~l~~~~ 201 (356)
T cd06451 125 IKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGG--EPFRMDEWGVDVAYTGSQKALGA-PPGLGPIAFSE 201 (356)
T ss_pred CCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccC--ccccccccCccEEEecCchhccC-CCCcceeEECH
Confidence 48999999999999999999 9999999999999999998886 47888888999999999998886 88999999999
Q ss_pred CCccccCC--CCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhh
Q 006746 352 STVPILVD--NTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRR 429 (632)
Q Consensus 352 ~~~~~L~~--~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~ 429 (632)
+.++.+.. ...+ .+|... ...+ ..+. .+ ...|+++++.+.++.
T Consensus 202 ~~~~~~~~~~~~~~----------~~~~~~--------------~~~~-~~~~-~~--------~~~~t~~~~~~~a~~- 246 (356)
T cd06451 202 RALERIKKKTKPKG----------FYFDLL--------------LLLK-YWGE-GY--------SYPHTPPVNLLYALR- 246 (356)
T ss_pred HHHHHHHhcCCCCc----------eeecHH--------------HHHh-hhcc-cC--------CCCCCChHHHHHHHH-
Confidence 88766653 1111 011000 0000 0000 00 023556666677776
Q ss_pred hhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcE
Q 006746 430 AEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPA 509 (632)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~i 509 (632)
++++++.+.|++.+.++.+.+++++++.|.++ | ++++++. ..++++
T Consensus 247 -----------------------aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~--~~~~~~ 292 (356)
T cd06451 247 -----------------------EALDLILEEGLENRWARHRRLAKALREGLEAL------G---LKLLAKP--ELRSPT 292 (356)
T ss_pred -----------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc------C---CeeccCc--ccCCCc
Confidence 89999988899999999999999999999987 4 4666653 235666
Q ss_pred EEEEEccCCCCccCHHHHHHHHHhC-CcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEE
Q 006746 510 LAFNVFDWKREKIEPVLVQKLADRE-NISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 588 (632)
Q Consensus 510 vaFnv~~~~G~~i~~~~V~kla~~~-gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRv 588 (632)
+.+...+ .+ ++...+.+.+.++ ||.++.|..| ...++||+
T Consensus 293 ~~~~~~~-~~--~~~~~~~~~L~~~~gI~~~~g~~~------------------------------------~~~~~iRi 333 (356)
T cd06451 293 VTAVLVP-EG--VDGDEVVRRLMKRYNIEIAGGLGP------------------------------------TAGKVFRI 333 (356)
T ss_pred eEEEECC-CC--CCHHHHHHHHHHhCCEEEeccccc------------------------------------ccCCEEEE
Confidence 6543332 12 4566666655555 9999876421 12359999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhh
Q 006746 589 SLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 589 Slg~~~t~eDV~rlv~~l~~~l~ 611 (632)
|++.++|.|||+++++.|++.++
T Consensus 334 s~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 334 GHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ecCCCCCHHHHHHHHHHHHHHhC
Confidence 99999999999999999998763
No 30
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.98 E-value=3.5e-31 Score=285.06 Aligned_cols=312 Identities=13% Similarity=0.096 Sum_probs=225.0
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEe-CCHHHHHHHHHhhCCCCCCCeE-EEeccccchhhHHHHHHHHhc--CCEEE
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFT-ANRTSAFKLLAESYPFMSVKNL-LTVYDYESEAVEAMIRTSEKR--GARVM 243 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft-~naT~al~lv~~sl~~~~gd~i-lt~~d~~s~~v~~~~~~a~~~--G~~v~ 243 (632)
..++++++|++++++||+++ +|+|+|+ +|+|.+++.++.++. .+ +.+ ++.-+|-+ .+.+.++.. +.++.
T Consensus 39 f~~~~~~~r~~l~~l~~~~~-~~~v~f~~gs~T~a~~~~~~~l~-~~-~~l~i~~G~~~~----~~~~~a~~~~~~~~~~ 111 (361)
T TIGR01366 39 VKNLVGRVREGLAELFSLPD-GYEVILGNGGATAFWDAATFGLI-EK-KSLHLSFGEFSS----KFAKAVKLAPWLGEPI 111 (361)
T ss_pred HHHHHHHHHHHHHHHhCCCC-CceEEEECCchhHHHHHHHHhcc-cc-cccEEecCHHHH----HHHHHHHhhhccCCce
Confidence 46899999999999999964 5689996 669999999999984 22 333 33334432 223444431 23778
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS 322 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls 322 (632)
.++.+|. ..++. .+. +++++|+++|++|.||+.+|++ | +|++|++++|||+|++|+ .++|++
T Consensus 112 ~~~~~~~-~~~~~-----~~~------~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~--~~idv~ 174 (361)
T TIGR01366 112 IVTADPG-SAPEP-----QAD------PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGG--LPVDIA 174 (361)
T ss_pred EEecCCC-CCCCC-----ccC------CCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccC--CCCCHH
Confidence 8887643 23332 122 3569999999999999999998 7 488999999999999998 699988
Q ss_pred CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhh-hhcc
Q 006746 323 LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE-KVAA 401 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e-~e~g 401 (632)
+ +||+++|+||++|. |.|++++++++++++++++...+|... |. ++.... .+.+ ++.+
T Consensus 175 ~--~D~~~~s~~K~lg~-~~Gl~~~~~s~~~~~~~~~~~~~~~~~--p~---~~d~~~-------------~~~~~~~~~ 233 (361)
T TIGR01366 175 E--TDVYYFAPQKNFAS-DGGLWLAIMSPAALERIEAIAASGRWV--PE---FLSLPT-------------AVDNSLKNQ 233 (361)
T ss_pred H--CCEEEEEchhhcCC-CCceEEEEECHHHHhhhhcccCCCCCC--ch---hhhHHH-------------HHhccccCC
Confidence 5 89999999999995 779999999999998888765553210 10 110000 0000 1123
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~ 480 (632)
| .+|+++..+++|. ++|+++.++ |++++.+|++.|++++++.
T Consensus 234 t-------------~~tp~i~~i~~l~------------------------~al~~l~~~gg~e~~~~r~~~l~~~l~~~ 276 (361)
T TIGR01366 234 T-------------YNTPAIATLALLA------------------------EQIDWMNGNGGLDWAVARTADSSSRLYSW 276 (361)
T ss_pred C-------------CCCchHHHHHHHH------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 2 3566777778887 999999999 6999999999999999999
Q ss_pred HHccCCCCCCCCCcEEEECCCC--CCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKI--RFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 558 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~--~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~ 558 (632)
|.++ +.+++|.+.. ...+.++|+|+ .+ ++++.+.+.++++||.+..|.
T Consensus 277 l~~~--------~~~~~~~~~~~~~s~~v~~v~~~-~g-----~~~~~v~~~L~~~gI~i~~~~---------------- 326 (361)
T TIGR01366 277 AQER--------PYATPFVTDPGKRSQVVGTIDFV-DD-----IDAATVAKILRANGIVDTEPY---------------- 326 (361)
T ss_pred HHhC--------CCcccCCCChhhcccceEEEECC-Cc-----cCHHHHHHHHHHCCCeeccCc----------------
Confidence 9998 4466665421 11223555552 33 688888776677899985431
Q ss_pred hhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 559 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 559 ~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+.++||||++.|||.+||++|+++|++.++
T Consensus 327 --------------------~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 327 --------------------RKLGRNQLRVAMFPAIDPDDVEALTECVDWVVE 359 (361)
T ss_pred --------------------cccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHh
Confidence 001235899999999999999999999998764
No 31
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=3.6e-30 Score=285.20 Aligned_cols=349 Identities=14% Similarity=0.087 Sum_probs=255.2
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHH-HHHHHHHHHcCCCCCCccE
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLES-AMKKRIMDFLNISENDYGM 192 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~-~~R~~ia~~l~a~~~ey~v 192 (632)
+++-..+|+.+++.+...+... |-.+||++.+..|....+.++ .+|++++++||++++ ++
T Consensus 40 ~~sen~~s~~v~~~~~~~l~~~-----------------y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~--~~ 100 (452)
T PTZ00094 40 IASENFTSRAVLECLGSCFTNK-----------------YAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPE--EW 100 (452)
T ss_pred ecccccCCHHHHHHhcchhhcc-----------------ccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcc--cc
Confidence 4777899999999987655321 123788888766766667777 499999999999876 47
Q ss_pred EEe---CCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHH------hcCCEEEEEeccCCccccCHHHHHHH
Q 006746 193 VFT---ANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSE------KRGARVMSAEFSWPRLRINSEKLRKM 262 (632)
Q Consensus 193 vft---~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~------~~G~~v~~v~~~~~~~~i~~~~l~~~ 262 (632)
+|+ +++|+|..+++.++ +++||+|++ ..+|.+....|. ...+ ..+.++..++++ +++.+|.++|+++
T Consensus 101 ~~~~~~~sgt~an~~v~~al-~~~gd~Ii~~~~ehg~~l~~~~-~l~~~~~~~~~~~~~~~~~~~~-~~g~id~~~L~~~ 177 (452)
T PTZ00094 101 GVNVQPYSGSPANFAVYTAL-LQPHDRIMGLDLPSGGHLTHGF-YTAKKKVSATSIYFESLPYQVN-EKGLIDYDKLEEL 177 (452)
T ss_pred eeecCCCchHHHHHHHHHHh-cCCCCEEEecccccCCcccccc-cccccccccceeeeeeeecccC-CCCCcCHHHHHHH
Confidence 677 78999999999999 889999775 557765333331 1111 112344455565 4588999999999
Q ss_pred HHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC---CCCCcEEEEccccccC
Q 006746 263 VVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS---LVRPDFLICSFYQIFG 338 (632)
Q Consensus 263 i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls---~~~~Df~~~S~hK~~G 338 (632)
+.+.+ ++++++. .+ .+|...|++ |.++||++|++++||++|++|. .+.|+. ..++||+++|+|||++
T Consensus 178 l~~~~-----~~lvi~~-~s-~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~--i~~~~~~~~~~~~D~l~~S~hK~l~ 248 (452)
T PTZ00094 178 AKAFR-----PKLIIAG-AS-AYPRDIDYKRFREICDSVGAYLMADIAHTSGL--VAAGVLPSPFPYADVVTTTTHKSLR 248 (452)
T ss_pred HHHhC-----CCEEEEe-CC-CCCCccCHHHHHHHHHHcCCEEEEeccchhcc--ccCCCCCCCCCCCcEEEcCCccCCC
Confidence 96422 3666654 34 699999999 9999999999999999999987 444432 2368999999999664
Q ss_pred CCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCC
Q 006746 339 ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGK 418 (632)
Q Consensus 339 ~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt 418 (632)
. |.| |+++++++..+.+.+.... . .+ +.| .|+
T Consensus 249 G-P~G-g~l~~~~~~~~~l~~~~~~----------------~-------------~~-------p~~----------~G~ 280 (452)
T PTZ00094 249 G-PRS-GLIFYRKKVKPDIENKINE----------------A-------------VF-------PGL----------QGG 280 (452)
T ss_pred C-CCc-eEEEEecccchHHHHhhcc----------------c-------------cC-------CCC----------CCC
Confidence 3 998 8899988765433221100 0 00 000 245
Q ss_pred cccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEE
Q 006746 419 LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY 498 (632)
Q Consensus 419 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iy 498 (632)
++...++++. .+|+++...+.+.+.+|+..|+++|.+.|.+. | ++|+
T Consensus 281 ~~~~~iaal~------------------------~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~------g---~~v~ 327 (452)
T PTZ00094 281 PHNHQIAAIA------------------------VQLKEVQSPEWKEYAKQVLKNAKALAAALEKR------G---YDLV 327 (452)
T ss_pred chHHHHHHHH------------------------HHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC------C---cEEe
Confidence 5666788887 99999988889999999999999999999875 4 4566
Q ss_pred CCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEE-ccCccCChHHHhHHHHhhhhhhhhhhccccccccccccc
Q 006746 499 GPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISL-SYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKD 577 (632)
Q Consensus 499 gp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~l-r~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 577 (632)
++.. ..+..+|.|+..+ ++...+.++++++||.+ +.|..|.+.
T Consensus 328 ~~~~-~~~~~~v~~~~~~-----~~~~~~~~~L~~~gI~vs~~~~p~~~~------------------------------ 371 (452)
T PTZ00094 328 TGGT-DNHLVLVDLRPFG-----ITGSKMEKLLDAVNISVNKNTIPGDKS------------------------------ 371 (452)
T ss_pred cCCC-CCceEeecCCcCC-----CCHHHHHHHHHHCCcEEecccCCCCCc------------------------------
Confidence 6532 2355666776665 67888888888899999 566555421
Q ss_pred cCCCCCcEEEEccCCCCC----HHHHHHHHHHHHHhhhh
Q 006746 578 KANLGITVVTASLGYLAN----FEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 578 ~~~~~~~~VRvSlg~~~t----~eDV~rlv~~l~~~l~~ 612 (632)
....++||+|+++||| .+||++++++|++.+..
T Consensus 372 --~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 372 --ALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred --CCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 1234799999999998 99999999999999885
No 32
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=6.7e-29 Score=267.43 Aligned_cols=323 Identities=13% Similarity=0.077 Sum_probs=240.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
+.++++|+.+++++|++++...|++|+|+|+|+..++.++ +.+|++++ ....++. .. +...+++.|++++.++.+
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l-~~~~~~vlv~~~~~~~--~~-~~~~~~~~g~~~~~i~~~ 112 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL-VPRDGKVLVPDNGAYG--AR-IAQIAEYLGIAHVVLDTG 112 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc-cCCCCeEEEEeCCchH--HH-HHHHHHHcCCcEEEEECC
Confidence 5789999999999999765456889999999999999999 46777755 4444432 11 246678899999999987
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
.++.++++++++++++++ +++++.+++.+|.||..+|++ |.++||++|++++||++|.+|. .++++..+++|
T Consensus 113 -~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~--~~~~~~~~~~d 185 (368)
T PRK13479 113 -EDEPPDAAEVEAALAADP----RITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGA--IPIDIAELGID 185 (368)
T ss_pred -CCCCCCHHHHHHHHHhCC----CCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCC--ccccccccCce
Confidence 455789999999987532 457899999999999999999 9999999999999999998887 58999999999
Q ss_pred EEEEccccc-cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCC
Q 006746 328 FLICSFYQI-FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 406 (632)
Q Consensus 328 f~~~S~hK~-~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~ 406 (632)
++++|+||+ +| |.|+|+++++++.++.+......-..+. ...| .+. ...+..
T Consensus 186 ~~v~s~~K~l~g--~~G~G~l~~~~~~~~~~~~~~~~~~~~~----~~~~-----------------~~~-~~~~~~--- 238 (368)
T PRK13479 186 ALISSANKCIEG--VPGFGFVIARRSELEACKGNSRSLSLDL----YDQW-----------------AYM-EKTGQW--- 238 (368)
T ss_pred EEEecCcccccc--CCCceEEEECHHHHHHhhcCCCCeeecH----HHHH-----------------hhh-cccCCC---
Confidence 999999995 46 8899999999988776654221000000 0000 000 001111
Q ss_pred ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccC
Q 006746 407 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQ 485 (632)
Q Consensus 407 ~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~ 485 (632)
..|++++.+.++. ++++.+.+. |++++.+|++.+.+++++.|.++
T Consensus 239 ---------~~t~~~~~~~~l~------------------------~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 284 (368)
T PRK13479 239 ---------RFTPPTHVVAAFY------------------------QALLELEEEGGVPARGARYANNQRTLVAGMRAL- 284 (368)
T ss_pred ---------CCCCcHHHHHHHH------------------------HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-
Confidence 1246677778886 899977655 58999999999999999999987
Q ss_pred CCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhc
Q 006746 486 HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 565 (632)
Q Consensus 486 h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~ 565 (632)
| ++++.+.. ...+.+++|.+.+.. .++.+.+.+.+.++||.++.|..
T Consensus 285 -----g---~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~~g~~---------------------- 331 (368)
T PRK13479 285 -----G---FEPLLDAE-IQSPIIVTFHAPADP--AYDFKEFYERLKEQGFVIYPGKL---------------------- 331 (368)
T ss_pred -----C---CcccCCch-hcCceEEEEECCCCC--CcCHHHHHHHHHHCCEEEecCCC----------------------
Confidence 4 34555431 223456777765422 24556666666677999976521
Q ss_pred cccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 566 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.+|+|.+.++|.||+++++++|+++++.
T Consensus 332 ---------------~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 332 ---------------TQVDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred ---------------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 01248999987899999999999999998764
No 33
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.3e-28 Score=261.58 Aligned_cols=349 Identities=17% Similarity=0.166 Sum_probs=269.3
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCccEE
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGMV 193 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vv 193 (632)
.-|=...++.+++++..-+.. +|++ .-..++.++++.+..+|+++ +.+.++
T Consensus 10 ~PGP~~v~~~V~~am~~~~~~--------h~s~--------------------~F~~~~~~~~~~L~~v~~t~-~~~~~l 60 (383)
T COG0075 10 TPGPVPVPPRVLLAMARPMVG--------HRSP--------------------DFVGIMKEVLEKLRKVFGTE-NGDVVL 60 (383)
T ss_pred eCCCCCCCHHHHHHhcCCCCC--------CCCH--------------------HHHHHHHHHHHHHHHHhcCC-CCcEEE
Confidence 355567889999997652211 1121 12578899999999999998 345788
Q ss_pred EeCCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCc
Q 006746 194 FTANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQ 272 (632)
Q Consensus 194 ft~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~ 272 (632)
+++++|.|+...+.++ .++||+|| ....-++ .++.++++++|++|+.+..+|.. .+++++++++|+++ +.
T Consensus 61 l~gsGt~amEAav~sl-~~pgdkVLv~~nG~FG---~R~~~ia~~~g~~v~~~~~~wg~-~v~p~~v~~~L~~~----~~ 131 (383)
T COG0075 61 LSGSGTLAMEAAVASL-VEPGDKVLVVVNGKFG---ERFAEIAERYGAEVVVLEVEWGE-AVDPEEVEEALDKD----PD 131 (383)
T ss_pred EcCCcHHHHHHHHHhc-cCCCCeEEEEeCChHH---HHHHHHHHHhCCceEEEeCCCCC-CCCHHHHHHHHhcC----CC
Confidence 8899999999999999 78999965 5667665 35689999999999999999754 68999999999853 35
Q ss_pred eeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeC
Q 006746 273 RGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 273 ~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
.++|+++|+.+.||+++|++ |+++||++|.+++||+.+++|. .++++++|++|+++.+++|.++. |+|+|++.+++
T Consensus 132 ~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg--~~~~vd~wgiDv~itgSQK~l~~-PPGla~v~~S~ 208 (383)
T COG0075 132 IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGG--EPLKVDEWGIDVAITGSQKALGA-PPGLAFVAVSE 208 (383)
T ss_pred ccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCC--cccchhhcCccEEEecCchhccC-CCccceeEECH
Confidence 78999999999999999999 9999999999999999988887 59999999999999999998887 88999999999
Q ss_pred CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhh
Q 006746 352 STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAE 431 (632)
Q Consensus 352 ~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~ 431 (632)
++++.++..... .++.....+| .+.+ ..+..+ -||.++.+++|.
T Consensus 209 ~a~e~~~~~~~~---~~ylDL~~~~-----------------~~~~-~~~~~p------------~Tppv~~i~aL~--- 252 (383)
T COG0075 209 RALEAIEERKHP---SFYLDLKKWL-----------------KYME-KKGSTP------------YTPPVNLIYALR--- 252 (383)
T ss_pred HHHHHHhcCCCC---ceeecHHHHH-----------------HHHh-hcCCCC------------CCCCHHHHHHHH---
Confidence 998877543210 0010111111 1111 012333 356777899998
Q ss_pred hhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCC-cEE
Q 006746 432 ADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRG-PAL 510 (632)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg-~iv 510 (632)
++|+.+.+.|++++.+|++.+.++++.++..| | ++++.. +..++ .++
T Consensus 253 ---------------------~al~~i~~EGle~r~~RH~~~~~a~r~~~~al------G---l~~~~~--~~~~s~tvt 300 (383)
T COG0075 253 ---------------------EALDLILEEGLEARIARHRRLAEALRAGLEAL------G---LELFAD--PERRSPTVT 300 (383)
T ss_pred ---------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc------C---CccccC--cccCCCceE
Confidence 99999999999999999999999999999999 6 456662 23445 555
Q ss_pred EEEEccCCCCccCH-HHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEc
Q 006746 511 AFNVFDWKREKIEP-VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTAS 589 (632)
Q Consensus 511 aFnv~~~~G~~i~~-~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvS 589 (632)
+|.++.. ++. .....+.+++||.+..|. +......+||+
T Consensus 301 a~~~P~g----~~~~~~~~~~~~~~g~~i~gg~------------------------------------~~l~gkifRIG 340 (383)
T COG0075 301 AIKVPEG----VDDKKVRRALLKEYGVEIAGGQ------------------------------------GPLKGKIFRIG 340 (383)
T ss_pred EEECCCC----CCcHHHHHHHHHhCCEEecccc------------------------------------cccCccEEEEe
Confidence 6666542 443 344467888899998662 12233589999
Q ss_pred c-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 590 L-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 590 l-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
. | +-+.+||.+.+++|...|..
T Consensus 341 hMG-~~~~~dv~~~l~ale~~L~~ 363 (383)
T COG0075 341 HMG-NVRPEDVLAALAALEAALRE 363 (383)
T ss_pred cCc-cCCHHHHHHHHHHHHHHHHH
Confidence 4 7 99999999999999987665
No 34
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.96 E-value=2e-27 Score=260.37 Aligned_cols=353 Identities=13% Similarity=0.009 Sum_probs=246.2
Q ss_pred CceEeecCC--------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHH
Q 006746 108 NHTCLDYFG--------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRI 179 (632)
Q Consensus 108 ~~vyLD~ag--------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~i 179 (632)
..+|||+++ ++++.+.+.+.+...+... .+||++ .|... ++++++|+.+
T Consensus 33 ~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~-------------------~~np~s---~~~~~-~le~~~~~~l 89 (431)
T TIGR01788 33 DELSLDGNPRLNLATFVTTWMEPEARKLMDETINKN-------------------MIDKDE---YPQTA-EIENRCVNML 89 (431)
T ss_pred HHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcC-------------------CCCccc---CccHH-HHHHHHHHHH
Confidence 356777777 6666666788776654321 145544 24444 8999999999
Q ss_pred HHHcCCC-C-CCccEEEeCCHHHHHHHHHhhCCC-------CCC-----CeEEEe-ccccchhhHHHHHHHHhcCCEEEE
Q 006746 180 MDFLNIS-E-NDYGMVFTANRTSAFKLLAESYPF-------MSV-----KNLLTV-YDYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 180 a~~l~a~-~-~ey~vvft~naT~al~lv~~sl~~-------~~g-----d~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
+++||++ + ++..-+||+++|+|.++++.+... +.| .+|+++ .+|.| | ...++..|++++.
T Consensus 90 a~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~s----v-~ka~~~lg~~v~~ 164 (431)
T TIGR01788 90 ADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVC----W-EKFARYFDVELRE 164 (431)
T ss_pred HHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHH----H-HHHHHHcCceeEE
Confidence 9999998 3 332233489999999987755321 111 245554 46654 3 3456678999999
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC------CcEEEEecccc------
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN------DWHILIDACAL------ 311 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~------g~~vlvDaaq~------ 311 (632)
+|++...+.+|+++|+++|++++ .||++++++|.||.+.|++ |+++|+++ |++++|||||.
T Consensus 165 i~~d~~~~~vd~~~L~~~i~~~t------~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~ 238 (431)
T TIGR01788 165 VPMDPGRYVIDPEQVVEAVDENT------IGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPF 238 (431)
T ss_pred EecCCCceeeCHHHHHHHHhhCC------eEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHH
Confidence 99984335899999999998764 8999999999999999999 99999999 99999999999
Q ss_pred -CCCCCCCCCCCCCCCcEEEEcccccc-CCCCCceEEEEEeCCC--cccc--CCCCCCC-ceeecccccccccccccCCC
Q 006746 312 -GPKDMDSFGLSLVRPDFLICSFYQIF-GENPSGFGCLFVKKST--VPIL--VDNTSSG-MVSLLPAKKQLWLTDEFSSC 384 (632)
Q Consensus 312 -~g~~m~~ldls~~~~Df~~~S~hK~~-G~~P~G~G~L~Vr~~~--~~~L--~~~~~gG-~v~~~~~~~~~~~~~~~~~~ 384 (632)
.+. .++|+...++|.+++|+|||+ | |.|+|+||+|++. ...+ .+.|.+| ..+ +
T Consensus 239 ~~~~--~~~~~~~~~~DSis~s~HK~~~~--P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~--------~-------- 298 (431)
T TIGR01788 239 VYPD--LEWDFRLPRVKSINVSGHKYGLV--YPGVGWVIWRDEEALPEELIFHVNYLGGDEPT--------F-------- 298 (431)
T ss_pred hCCC--chhhcCCCCceEEEECchhccCC--CCCcEEEEEeChHHcchhheecccccCCCCCC--------c--------
Confidence 444 466777778999999999976 6 9999999999862 1111 1112221 000 0
Q ss_pred CCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHH
Q 006746 385 ETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLT 464 (632)
Q Consensus 385 ~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~ 464 (632)
.+ .++ |+|+. .+..+ ..|..+-..|+.
T Consensus 299 t~-------------~~s------------R~g~~---al~~w-------------------------~~l~~lG~~G~~ 325 (431)
T TIGR01788 299 TL-------------NFS------------RPANQ---VIAQY-------------------------YNFLRLGREGYR 325 (431)
T ss_pred ce-------------ecC------------chHHH---HHHHH-------------------------HHHHHhcHHHHH
Confidence 00 011 11110 01111 344444457899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccC
Q 006746 465 MISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLH 544 (632)
Q Consensus 465 ~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c 544 (632)
.+.+|...|+++|.+.|.++ |.++|++|. .+.++|+|++.+.+...++...+.+.+++.||.+..= .+
T Consensus 326 ~i~~~~~~la~~l~~~L~~~--------~~~el~~~~---~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~-~~ 393 (431)
T TIGR01788 326 KIMQNSLDVARYLAEEIAKL--------GPFEIISDG---SGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAY-TL 393 (431)
T ss_pred HHHHHHHHHHHHHHHHHHhC--------CCEEEeeCC---CCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCC-CC
Confidence 99999999999999999987 779999873 3789999999864333366777777777788865210 00
Q ss_pred ChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 545 HIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.. .-.+.-++|+..-...+.+-+++|++-|+..+.
T Consensus 394 p~--------------------------------~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~ 428 (431)
T TIGR01788 394 PK--------------------------------NAEDIVVMRIVVREGFSRDLAELLIEDIEAALA 428 (431)
T ss_pred CC--------------------------------ccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 00 011345899999888999999999999987654
No 35
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=3.3e-27 Score=251.88 Aligned_cols=322 Identities=16% Similarity=0.147 Sum_probs=237.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCe-EEEeccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKN-LLTVYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~-ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.++++++|+.+++++|++++...|++|+|+|+++.+++.++ +.++++ |++...+++.. +...++..|++++.+++
T Consensus 30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~-~~~~~~vi~~~~~~~~~~---~~~~a~~~g~~~~~i~~ 105 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL-VPRDGKLLVLINGAYGER---LAKICEYLGIPHTDLNF 105 (355)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhc-cCCCCeEEEECCCchhhH---HHHHHHHcCCceEEEec
Confidence 37789999999999999875446889999999999999998 456776 44544443311 24567789999999998
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
+ ....++.+++++.+++++ +.++++++|.+|.||..+|++ |+++|+++|+++++|++++.|. .++++..+++
T Consensus 106 ~-~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~--~~~~~~~~~~ 178 (355)
T TIGR03301 106 S-EYEPPDLNRIEEALAADP----DITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGA--IPIDIEELDV 178 (355)
T ss_pred C-CCCCCCHHHHHHHHHhCC----CceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCC--cccchhhcCc
Confidence 7 446789999999997532 467899999999999999999 9999999999999999998886 4788888999
Q ss_pred cEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCC
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 406 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~ 406 (632)
|++++|+||+++. |.|+|++++++++++.+......-..+. ...| .+.+. .+.
T Consensus 179 d~~~~s~~K~l~~-~~G~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------------~~~~~-~~~---- 231 (355)
T TIGR03301 179 DALIASANKCLEG-VPGFGFVIARRDLLEASAGNARSLYLDL----YDQW-----------------AYMEK-TGK---- 231 (355)
T ss_pred cEEEecCCccccc-CCceeEEEECHHHHHHhhCCCCCceeeH----HHHH-----------------HHhhh-cCC----
Confidence 9999999996532 7799999999998776542111000000 0000 00000 011
Q ss_pred ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHccC
Q 006746 407 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG-LTMISRRGRCLINWLVNALMKLQ 485 (632)
Q Consensus 407 ~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G-l~~I~~r~~~L~~~L~~~L~~l~ 485 (632)
..++++.+.+.++. .+|+.+.+.| ++.+.+|.+.+.+++++.|.++
T Consensus 232 --------~~~t~~~~~~~a~~------------------------~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~- 278 (355)
T TIGR03301 232 --------WRFTPPTHTVYAFA------------------------QALEELEAEGGVPARIARYRRNRELLVDGLRAL- 278 (355)
T ss_pred --------CCCCCcHHHHHHHH------------------------HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-
Confidence 12345666677776 8899887777 9999999999999999999887
Q ss_pred CCCCCCCCcEEEECCCCCCCCCc-EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhh
Q 006746 486 HPNTEGNALVKIYGPKIRFDRGP-ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 564 (632)
Q Consensus 486 h~~~~G~p~v~Iygp~~~~~rg~-ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~ 564 (632)
| ++++.+.. .+++ ++.|.+++. ...+...+.+.+.++||.++.|..
T Consensus 279 -----g---~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gi~i~~~~~--------------------- 325 (355)
T TIGR03301 279 -----G---FQPLLPER--WQSPIIVSFLYPDD--PDFDFDDFYQELKERGFVIYPGKL--------------------- 325 (355)
T ss_pred -----C---CeeecCCC--CCCCcEEEEECCCC--CcchHHHHHHHHHHCCEEEECCcc---------------------
Confidence 4 34555542 3444 567776531 113455677777778999976521
Q ss_pred ccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 565 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
. ..+.||+|++.+++.+|++++++.|++.|
T Consensus 326 ---------------~-~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 326 ---------------T-LADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred ---------------c-cccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 0 11689999999999999999999998754
No 36
>PRK02769 histidine decarboxylase; Provisional
Probab=99.95 E-value=1.4e-25 Score=242.62 Aligned_cols=340 Identities=15% Similarity=0.082 Sum_probs=249.3
Q ss_pred cCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc
Q 006746 104 LSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL 183 (632)
Q Consensus 104 L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l 183 (632)
++.+...|+-|-...-++++.++.+..+... ..+||.+...+|....++++++++.++++|
T Consensus 18 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~-------------------n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~ 78 (380)
T PRK02769 18 LRHNQYFNVGYPEAADFDYSALKRFFSFSIN-------------------NCGDPYSKSNYPLNSFDFERDVMNFFAELF 78 (380)
T ss_pred HHHhhhcccCCCchhhcCHHHHHHHHHhhhc-------------------cCCCccccCCCCCChHHHHHHHHHHHHHHh
Confidence 4334556888888888888888887654321 115666666667777889999999999999
Q ss_pred CCCCCCccEEEeCCHHHHHHHHHhh-CCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 184 NISENDYGMVFTANRTSAFKLLAES-YPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 184 ~a~~~ey~vvft~naT~al~lv~~s-l~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
|+++++...+||+++|++..+.... ..+.++++|++ ..+|+| + ...++..|.+++.++.+ +++++|.++|++
T Consensus 79 g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~S--v---~ka~~~lg~~~~~V~~~-~~g~id~~~L~~ 152 (380)
T PRK02769 79 KIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYS--V---SKIARLLRIKSRVITSL-PNGEIDYDDLIS 152 (380)
T ss_pred CCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceeh--H---HHHHHHcCCCCceeccC-CCCcCcHHHHHH
Confidence 9987654458999999996654332 23456778765 457776 2 23445678888888887 788999999999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCC---cEEEEeccccCCCCCC-------CCCCCCCCCcEEE
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEND---WHILIDACALGPKDMD-------SFGLSLVRPDFLI 330 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g---~~vlvDaaq~~g~~m~-------~ldls~~~~Df~~ 330 (632)
+|+++ ..++.++++++.++.||.+.|++ |+++|+++| ++++|||||.++. . ++|+.. ++|+++
T Consensus 153 ~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~--~p~~~~~~~~d~~~-~vDsis 226 (380)
T PRK02769 153 KIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMI--LPFVNNPPPFSFAD-GIDSIA 226 (380)
T ss_pred HHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEeccccee--ecccCccccCCccC-CCCEEE
Confidence 99875 23568999999999999999999 999999998 6999999999876 3 478777 999999
Q ss_pred EccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccch
Q 006746 331 CSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMS 410 (632)
Q Consensus 331 ~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~ 410 (632)
+|+|||+|. |.|+|+||+|++.+..+.+. . . |.... + .. .
T Consensus 227 ~s~HK~~~~-P~g~G~l~~r~~~~~~~~~~--~----------~-yl~~~------d-----~t----~----------- 266 (380)
T PRK02769 227 ISGHKFIGS-PMPCGIVLAKKKYVERISVD--V----------D-YIGSR------D-----QT----I----------- 266 (380)
T ss_pred ECCcccCCC-CCCcEEEEEehhhhhhcccC--c----------c-ccCCC------C-----CC----c-----------
Confidence 999998887 99999999999876554331 0 0 10000 0 00 1
Q ss_pred hhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCC
Q 006746 411 IEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTE 490 (632)
Q Consensus 411 ~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~ 490 (632)
.|+++...+.++- .+|+.+...|+.++.++...|+++|.+.|.++
T Consensus 267 -----~GSR~g~~~l~lw------------------------~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~------ 311 (380)
T PRK02769 267 -----SGSRNGHTALLLW------------------------AAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN------ 311 (380)
T ss_pred -----cCCCCcHHHHHHH------------------------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC------
Confidence 3444544455554 88999988999999999999999999999876
Q ss_pred CCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccc
Q 006746 491 GNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSK 570 (632)
Q Consensus 491 G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 570 (632)
| +++++. ....+|+|..++ .. + . .+-+|.+
T Consensus 312 g---~~~~~~----p~~~~v~f~~~~-------~~-~---~--~~w~l~~------------------------------ 341 (380)
T PRK02769 312 G---IPAWRN----PNSITVVFPCPS-------ER-I---W--KKWHLAT------------------------------ 341 (380)
T ss_pred C---CEEEcC----CCceEEEEcCCC-------HH-H---H--hCeeEcc------------------------------
Confidence 4 455553 357788886443 11 1 1 2333321
Q ss_pred ccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 571 SDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 571 ~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
-...+|+..-...|.|.|+.|++-|+..+
T Consensus 342 -----------~~~~~hi~~~~~~~~~~~~~f~~dl~~~~ 370 (380)
T PRK02769 342 -----------SGNQAHIITMPHHNKQQIDSLIDELIFDL 370 (380)
T ss_pred -----------cCCEEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 01378888878889999999999888654
No 37
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=99.95 E-value=6.1e-29 Score=269.01 Aligned_cols=397 Identities=20% Similarity=0.169 Sum_probs=286.6
Q ss_pred HHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHH
Q 006746 97 RAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMK 176 (632)
Q Consensus 97 R~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R 176 (632)
|++||.+| + |||+++.++++++|++...--.... ...|||++..-+......++++|
T Consensus 14 r~~e~s~~--~---yldhag~tl~sesq~~g~~~~sq~~------------------e~~nphs~~~ts~~l~~~v~Q~r 70 (728)
T KOG2142|consen 14 RDREFSRL--A---YLDHAGRTLFSESQLEGVAFQSQSS------------------ENANPHSHLGTSRSLARLVAQVR 70 (728)
T ss_pred hhHHHHHH--H---HHHhhhhhhhhhcccchhhhhhhcc------------------ccCCCcccccchHHHHHHHHHHH
Confidence 77889887 3 9999999999999999832211100 12567776654555578999999
Q ss_pred HHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCC-CCeEE---Eec-cccchhhHHHHHHHHhcCCEEEEE-ecc--
Q 006746 177 KRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMS-VKNLL---TVY-DYESEAVEAMIRTSEKRGARVMSA-EFS-- 248 (632)
Q Consensus 177 ~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~-gd~il---t~~-d~~s~~v~~~~~~a~~~G~~v~~v-~~~-- 248 (632)
-+|..+|+....+|+++||. .|+||++++++|||-. +.++. .++ .|-+.+...|+. .-.|+-+..+ ...
T Consensus 71 ~ril~~f~tta~dy~v~lp~-~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~--~~~~~gl~sy~q~~~i 147 (728)
T KOG2142|consen 71 LRILALFNTTAFDYEVSLPA-LTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRL--DYSGIGLFSYSQTNEI 147 (728)
T ss_pred HHHHHHhccccccccchhHH-HHHHHHHHHHhCccccccccccchhhhhhcccccccceeee--eeeccceEEeeeeeec
Confidence 99999999999999999998 9999999999999853 43342 333 333333222332 1223333333 111
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHh-hCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQ-ENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~-~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
|+....+.... ........|+.++.++|+.|.++-..|+...+ ..+|+++||++..+.. .+||++.+++|
T Consensus 148 ~~~~~~sls~~-------~~~ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSa--f~Ldaesy~f~ 218 (728)
T KOG2142|consen 148 SDSEEFSLSES-------EANLSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSA--FPLDAESYPFD 218 (728)
T ss_pred ccccccccccc-------ccCcccchhcccchhcccccceeeeeeecccccCCceEEEEEeeccccc--ccchHhhCCCc
Confidence 22211111111 11123568999999999999996555666555 7899999999999987 69999999999
Q ss_pred EEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCc
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 407 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~ 407 (632)
|... +||+||+ |+ |+|.+.++..+.. .||+++...+...++.... +++ .+ +++||.+|-.
T Consensus 219 ~~~~-lltiFgy-et--gAvlv~~r~A~~~----Ggkt~sa~f~wp~~~l~s~----~lk-----kr---~e~gk~~~kd 278 (728)
T KOG2142|consen 219 FNPK-LLTIFGY-ET--GAVLVMNRSAELK----GGKTASAEFSWPMLYLLSE----KLK-----KR---FEDGKLRFKD 278 (728)
T ss_pred ccch-heeecCC-Cc--hhhHHHhhhhHhh----cCccceeecccchHHHHHH----HHH-----HH---Hhhccccccc
Confidence 9999 9999998 77 8888877765433 3366654322222211111 111 12 4688888876
Q ss_pred cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHccC
Q 006746 408 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL--GLTMISRRGRCLINWLVNALMKLQ 485 (632)
Q Consensus 408 ~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~--Gl~~I~~r~~~L~~~L~~~L~~l~ 485 (632)
+... + .++..+.++ |+..|..+...|.+++.-.|.++.
T Consensus 279 ~a~g---------------l-------------------------~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~ 318 (728)
T KOG2142|consen 279 IAQG---------------L-------------------------FVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALA 318 (728)
T ss_pred hhhh---------------e-------------------------eccchHhhhcccchhHHHHHHHHhhhHHHHHhhhc
Confidence 5432 1 344444444 699999999999999999999998
Q ss_pred CCCCCCCCcEEEECCC--CCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHH----hhhhh
Q 006746 486 HPNTEGNALVKIYGPK--IRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK----EKDNV 559 (632)
Q Consensus 486 h~~~~G~p~v~Iygp~--~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~----~~~~~ 559 (632)
| |.|++++||.. .+.-.+++++||+.+.+|..+..-+|.|.+ -.||.+|+||+||+|+|+.+++ .....
T Consensus 319 l----G~kdmd~yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~-i~~l~lrtGcfcn~Gack~~pgl~~~~~~~~ 393 (728)
T KOG2142|consen 319 L----GPKDMDSYGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSA-ISGLELRTGCFCNIGACKIYPGLYLEMSQKG 393 (728)
T ss_pred c----CcchHhhhhhhccCccceeeeEEEEeccCCCCceeeeeeehhh-hhceeccCCCCCCCcceeecccccHHHHHHH
Confidence 8 77999999864 345679999999999889999999999998 8999999999999999998875 45666
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHH
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQ 608 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~ 608 (632)
++++.+|++. ++.+ +| |+++|.+||+++..++.+
T Consensus 394 ~~~g~~cgD~---------dg~~-----~s-~~~~~~~~~~a~~~~~v~ 427 (728)
T KOG2142|consen 394 LSAGKGCGDN---------DGQP-----VS-GYMQTPADVGAYLSAQVS 427 (728)
T ss_pred hhhccccccC---------CCCc-----cc-ccccchhhhhHHHHHhhh
Confidence 7888999864 1222 88 999999999999988764
No 38
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=3.1e-25 Score=238.65 Aligned_cols=302 Identities=14% Similarity=0.069 Sum_probs=219.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC---CCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEE
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY---PFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl---~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
..+++++|+.+++++|+++. .++||+++|+++..++.++ .++++++|++. .+|.+ | ...++..|++++.
T Consensus 58 ~~~~~~~~~~la~~~g~~~~--~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s----~-~~~~~~~g~~~~~ 130 (371)
T PRK13520 58 AKLEEEAVEMLGELLHLPDA--YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFS----F-DKAADMLGVELRR 130 (371)
T ss_pred HHHHHHHHHHHHHHhCCCCC--CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHH----H-HHHHHHcCceEEE
Confidence 46678999999999999754 5789999999998876554 33467887754 45543 3 4556778999999
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC---CC--CC
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK---DM--DS 318 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~---~m--~~ 318 (632)
++.+ +++.+++++|+++|++++ .++++.+.+|.||...|++ |.++|+++|++++||++|.++. .. ..
T Consensus 131 v~~~-~~~~~d~~~l~~~i~~~~------~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~ 203 (371)
T PRK13520 131 APLD-DDYRVDVKAVEDLIDDNT------IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPN 203 (371)
T ss_pred ecCC-CCCcCCHHHHHHHHhhCC------EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCC
Confidence 9987 466789999999998653 6777888889999999999 9999999999999999987542 00 12
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCC-CccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhh
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS-TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE 397 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~-~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e 397 (632)
+++...++|++++|+||+.+. |.+.|+++++++ .++.+... .+++.... .+
T Consensus 204 ~~~~~~~vd~~~~s~~K~~~a-~~~~G~~~~~~~~~~~~l~~~------------~~~~~~~~-------------~~-- 255 (371)
T PRK13520 204 FDFSLPGVDSITIDPHKMGLA-PIPAGGILFRDESYLDALAVD------------TPYLTSKK-------------QA-- 255 (371)
T ss_pred ccccCCCCceEEECCccccCc-cCCceEEEEcCHHHHHhhccc------------CccccCCC-------------Cc--
Confidence 566667899999999997654 778998998765 44433210 00110000 00
Q ss_pred hhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHH
Q 006746 398 KVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWL 477 (632)
Q Consensus 398 ~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L 477 (632)
...|| ++.+.+.++. .+|+.+...|++++.++...++++|
T Consensus 256 ~~~gt----------------~~~~~~~~~~------------------------~al~~l~~~g~~~~~~~~~~~~~~l 295 (371)
T PRK13520 256 TLTGT----------------RSGAGVAATY------------------------AVMKYLGREGYRKVVERCMENTRWL 295 (371)
T ss_pred ceEee----------------ccChHHHHHH------------------------HHHhhhcHhHHHHHHHHHHHHHHHH
Confidence 01233 3333344444 7888877778999999999999999
Q ss_pred HHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhh
Q 006746 478 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 557 (632)
Q Consensus 478 ~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~ 557 (632)
++.|.++ | ++++.+ ...++++|.+. +.+.+.+.+.++||.++.+
T Consensus 296 ~~~L~~~------g---~~~~~~----~~~~~v~~~~~-------~~~~v~~~L~~~gi~v~~~---------------- 339 (371)
T PRK13520 296 AEELKER------G---FEPVIE----PVLNIVAFDDP-------NPDEVREKLRERGWRVSVT---------------- 339 (371)
T ss_pred HHHHHhC------C---CEEecC----CCceEEEEecC-------CHHHHHHHHHHCCceeccC----------------
Confidence 9999987 4 342222 13568888764 3456666666679988642
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
....+||+|++.++|.+||++|++.|++.++
T Consensus 340 -----------------------~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 340 -----------------------RCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred -----------------------CCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 0135899999999999999999999998764
No 39
>PLN02452 phosphoserine transaminase
Probab=99.94 E-value=3.4e-25 Score=238.06 Aligned_cols=347 Identities=13% Similarity=0.069 Sum_probs=246.0
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
++|+=.+|=..+|..|++++.+.+-..... .+... ..+| .+..-.++++++++.+.++++++ +
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~------g~s~~--------~~sH--Rs~~f~~i~~~~~~~L~~l~~~p-~ 69 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGS------GMSVM--------EMSH--RGKEFLSIIQKAEADLRELLDIP-D 69 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhccccc------Ccccc--------ccCC--CchHHHHHHHHHHHHHHHHhCCC-C
Confidence 467666777799999999977543211000 00000 0011 02223689999999999999985 5
Q ss_pred CccEEEe-CCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCCc--cccCHHHHHHHHH
Q 006746 189 DYGMVFT-ANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWPR--LRINSEKLRKMVV 264 (632)
Q Consensus 189 ey~vvft-~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~--~~i~~~~l~~~i~ 264 (632)
+|.|+|. .++|.++..+..++ ..+|++++ ......++ .+.+.|++.|...+.+...+.. ..++++++ +
T Consensus 70 ~y~v~~l~Gsgt~~~ea~~~nl-~~~~~~~l~~~~G~fg~---r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~ 141 (365)
T PLN02452 70 NYEVLFLQGGASTQFAAIPLNL-CKPGDKADFVVTGSWSK---KAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----E 141 (365)
T ss_pred CceEEEEeCccHHHHHHHHHhc-CCCCCeEEEEECCHHHH---HHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----C
Confidence 6887766 78999999999998 66888854 55676652 3466788898754444322211 12455554 2
Q ss_pred hcCcCCCceeEEEEeccCCCCccc-cchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCC
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGAR-YPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPS 342 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~-~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~ 342 (632)
. .+....|.++|..+.||+. .|++ +. +++++||++|++|. .++|+++|++|| +|+||.+| |.
T Consensus 142 ~----~~~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~--~pidv~~~~v~~--~saqK~lG--P~ 205 (365)
T PLN02452 142 L----TPDAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLS--KPVDVSKYGVIY--AGAQKNVG--PS 205 (365)
T ss_pred C----CCCCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccC--cccCHHHcCEEE--EecccccC--CC
Confidence 1 1346899999999999996 8877 54 38999999999998 699999999988 59999999 89
Q ss_pred ceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccc
Q 006746 343 GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 422 (632)
Q Consensus 343 G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~ 422 (632)
|+|++++|+++++++++.... .. .| .+. .+.++ ..+||++.
T Consensus 206 Gl~~v~vr~~~l~~~~~~~~~-~~--------~~-----------------~~~-~~~~s------------~~~TP~v~ 246 (365)
T PLN02452 206 GVTIVIIRKDLIGNARPITPG-ML--------DY-----------------KIH-AENDS------------LYNTPPCF 246 (365)
T ss_pred CeEEEEEcHHHHhhcccCCCc-hh--------hH-----------------HHH-HhcCC------------ccCChhHH
Confidence 999999999998776532110 00 01 010 01111 14678999
Q ss_pred hhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCC
Q 006746 423 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 501 (632)
Q Consensus 423 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~ 501 (632)
.|+++. .+|+++.+. |++++.+|.+.++++|++.|.++ +.+ |++.
T Consensus 247 ~i~~l~------------------------~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~--------~G~--y~~~ 292 (365)
T PLN02452 247 GIYMCG------------------------LVFEDLLAQGGLKAMEKRNIRKADLLYDAIDES--------NGF--YVCP 292 (365)
T ss_pred HHHHHH------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC--------CCc--ccCC
Confidence 999998 999999986 89999999999999999999986 333 5543
Q ss_pred -CCCCC-CcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccC
Q 006746 502 -IRFDR-GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKA 579 (632)
Q Consensus 502 -~~~~r-g~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 579 (632)
++..| ..+|+|++.+.+ ..+.+.+.+.++||..-.|.
T Consensus 293 ~~~~~rs~~~vsF~~~~~~----~~~~f~~~~~~~g~~~~~G~------------------------------------- 331 (365)
T PLN02452 293 VEKSVRSLMNVPFTLGGSE----LEAEFVKEAAKAGMVQLKGH------------------------------------- 331 (365)
T ss_pred CChHHhCCeEEEEEcCCch----hHHHHHHHHHHCCCcccCCc-------------------------------------
Confidence 22334 459999998742 34566677778888875441
Q ss_pred CCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 580 NLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 580 ~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+..|.+|||+=--.+.|||++|++|+++|-.
T Consensus 332 -r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 332 -RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred -cccCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 1234599999888999999999999999854
No 40
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=2.4e-24 Score=234.18 Aligned_cols=218 Identities=11% Similarity=0.043 Sum_probs=170.9
Q ss_pred CceEeec-CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc-ccccccchhHHHHHHHHHHHHHcCC
Q 006746 108 NHTCLDY-FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 108 ~~vyLD~-ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s-~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
..+.||- .-.|++++.+++++.++... ++|+++ .+..+......++++|+.+++++|+
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~ 78 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDG--------------------YSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM 78 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhc--------------------cCCCcccccccccccChHHHHHHHHHHHHhCC
Confidence 3444554 35789999999998876531 134333 2222333456789999999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc-CCccccCHHHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS-WPRLRINSEKLRKMV 263 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~-~~~~~i~~~~l~~~i 263 (632)
+ .++||+|+|+|+.+++.++ +++|++|++. .+|.+. . ..++..|++++.++.+ .+++.++++++++.|
T Consensus 79 ~----~~~~~~g~t~a~~~al~~l-~~~gd~Vlv~~~~h~s~-~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 148 (387)
T PRK09331 79 D----EARVTHGAREGKFAVMHSL-CKKGDYVVLDGLAHYTS-Y----VAAERAGLNVREVPKTGYPEYKITPEAYAEKI 148 (387)
T ss_pred C----cEEEeCCHHHHHHHHHHHh-cCCCCEEEECCCchHHH-H----HHHHHcCCEEEEEeCccCcCCCcCHHHHHHHH
Confidence 5 3778999999999999998 7899997765 456652 2 2356789999999983 146779999999999
Q ss_pred HhcCc-CCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCC
Q 006746 264 VSKGK-KKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 264 ~~~~~-~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
.+... ..+++++|++++.++.||...|++ |+++||++|++++||++|++|. .+++...+++|++++|+||++|. |
T Consensus 149 ~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~--~~~~~~~~g~D~~~~s~~K~l~~-~ 225 (387)
T PRK09331 149 EEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGR--MPVDGKKLGADFIVGSGHKSMAA-S 225 (387)
T ss_pred HHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCC--cCCCHHHcCCCEEEeeCcccccC-C
Confidence 75310 113579999999999999999999 9999999999999999999987 58888889999999999998875 8
Q ss_pred CceEEEEEeCCCccccC
Q 006746 342 SGFGCLFVKKSTVPILV 358 (632)
Q Consensus 342 ~G~G~L~Vr~~~~~~L~ 358 (632)
.|+|+++++++.++.+.
T Consensus 226 ~~~G~l~~~~~~i~~~~ 242 (387)
T PRK09331 226 APSGVLATTEEYADKVF 242 (387)
T ss_pred CCEEEEEECHHHHhhcc
Confidence 89999999998776553
No 41
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=4.1e-25 Score=259.56 Aligned_cols=329 Identities=13% Similarity=0.072 Sum_probs=231.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHH----HHHHHHHhhCCCCC-CC----eEE-EeccccchhhHHHHHHHHhc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRT----SAFKLLAESYPFMS-VK----NLL-TVYDYESEAVEAMIRTSEKR 238 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT----~al~lv~~sl~~~~-gd----~il-t~~d~~s~~v~~~~~~a~~~ 238 (632)
.++++++|+.+++++|++ .|+|++|+| +++++++.+| +++ || +|+ +..+|++|..+| ...
T Consensus 567 ~~~~~~~r~~la~i~g~~----~v~f~pnaga~ge~a~~~vi~~~-~~~~Gd~~r~~vli~~~aH~sn~a~a-----~~~ 636 (993)
T PLN02414 567 QEMFEDLGDLLCEITGFD----SFSLQPNAGAAGEYAGLMVIRAY-HLSRGDHHRNVCIIPVSAHGTNPASA-----AMC 636 (993)
T ss_pred HHHHHHHHHHHHHHhCCC----eEEEcCCCcHHHHHHHHHHHHHH-HhccCCCCCCEEEeCCCcCccCHHHH-----HHC
Confidence 578999999999999993 699999999 9999999999 554 77 555 457999876655 337
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCC
Q 006746 239 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMD 317 (632)
Q Consensus 239 G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~ 317 (632)
|++|+.++.+ ++|.+|+++|+++|++++ .++++|++++.||.+|...|++ |+++||++|++++||++|..+. +.
T Consensus 637 G~~vv~v~~d-~~G~vDle~L~~~i~~~~---~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~-~~ 711 (993)
T PLN02414 637 GMKIVVVGTD-AKGNINIEELRKAAEAHK---DNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQ-VG 711 (993)
T ss_pred CCEEEEeccC-CCCCcCHHHHHHHHhccC---CCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhc-cC
Confidence 9999999998 788999999999998643 2579999999999999999999 9999999999999999998876 23
Q ss_pred CCCCCCCCCcEEEEccccccCCCCC-----ceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPS-----GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~-----G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
..+..++++||+++|.||+|+. |. |+|+|++++.....|.....+ .. ..+. .+ .++
T Consensus 712 l~~p~~~GaD~~~~s~HK~f~~-P~G~GGPg~G~l~~~~~L~p~lPg~~v~-~~------~~~~-~r------~~~---- 772 (993)
T PLN02414 712 LTSPGFIGADVCHLNLHKTFCI-PHGGGGPGMGPIGVKKHLAPFLPSHPVV-PT------GGIP-RP------EKT---- 772 (993)
T ss_pred cCCccccCCCEEEecCCccCCc-CcccCCCCeeeEEEchhhcccCCCCccc-cC------CCcc-cc------cCC----
Confidence 4555678999999999995443 54 599999999765444322111 00 0000 00 000
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH---HHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI---SRR 469 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I---~~r 469 (632)
.--||.+... ++ ....+ -+++.++..+|.+.+ .++
T Consensus 773 -----s~iGt~~~a~-~g------------~al~l------------------------~~A~~yi~~lG~~Gl~~~a~~ 810 (993)
T PLN02414 773 -----QPLGTISAAP-WG------------SALIL------------------------PISYTYIAMMGSEGLTDASKI 810 (993)
T ss_pred -----CCcCCccchh-hh------------hHHHH------------------------HHHHHHHHHHCHhHHHHHHHH
Confidence 0012221110 00 00112 278888888886666 999
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEE-EccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN-VFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFn-v~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
...+++|+.++|.+. ..+.+.+|..+.-+--++.+. +++..| ++...|.+.+-++||...+-.
T Consensus 811 a~~nAnYl~~rL~~~--------~~~~~~~~~~~~~hEfv~~~~~l~~~~g--~~~~di~krL~d~Gihapt~~------ 874 (993)
T PLN02414 811 AILNANYMAKRLEGH--------YPVLFRGKNGTCAHEFIIDLRPFKNTAG--IEPEDVAKRLMDYGFHAPTMS------ 874 (993)
T ss_pred HHHHHHHHHHHHHhh--------CCccccCCCCCeeeeEEEeccccccccC--CCHHHHHHHHHHcCcEEeeec------
Confidence 999999999999874 223344443221122333332 222223 566777765558899865310
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh-cccccccc
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA-DFVEKARW 620 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~-~f~~~~~~ 620 (632)
....+.+||+++.+++.+|+|+|+++|+.++++ .-|+...|
T Consensus 875 -------------------------------~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~~~~g~~ 916 (993)
T PLN02414 875 -------------------------------WPVPGTLMIEPTESESKAELDRFCDALISIREEIADIENGKA 916 (993)
T ss_pred -------------------------------cccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 012468999999999999999999999998877 33444444
No 42
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.94 E-value=2.4e-24 Score=232.11 Aligned_cols=299 Identities=16% Similarity=0.111 Sum_probs=213.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC---C--CCCCeEEEec-cccchhhHHHHHHHHhcCCEE
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP---F--MSVKNLLTVY-DYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~---~--~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v 242 (632)
..+++++|+.+++++|++++ .+++++++|+++.+++.++. . .+|++|+++. +|.+ | ...++..|+++
T Consensus 58 ~~~~~~~~~~la~~~g~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~----~-~~~~~~~G~~~ 130 (373)
T TIGR03812 58 KKIEEEVVGSLGNLLHLPDA--YGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFS----F-EKAAEMLGLEL 130 (373)
T ss_pred HHHHHHHHHHHHHHhCCCCC--CeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHH----H-HHHHHHcCCeE
Confidence 46778999999999999754 57788899999888765542 1 4678887654 5543 3 45567889999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC-------
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK------- 314 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~------- 314 (632)
+.++.+ +++.++.+++++++++++ ..++.+. .+|.||...|++ |.++|+++|++++||+++..+.
T Consensus 131 ~~v~~~-~~~~~d~~~l~~~l~~~~-----~~vv~~~-~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~ 203 (373)
T TIGR03812 131 RYAPLD-EDYTVDVKDVEDLIDDNT-----IGIVGIA-GTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKG 203 (373)
T ss_pred EEEeeC-CCCCcCHHHHHHHHhhCc-----EEEEEEC-CCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcC
Confidence 999987 567899999999997643 2444444 689999999999 9999999999999999986432
Q ss_pred -CCCCCCCCCCCCcEEEEccccccCCCCCceEEEEE-eCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 315 -DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFV-KKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 315 -~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~V-r~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
....+|+...++|++++|+|||... |.+.|++++ +++.++.+... . .|....
T Consensus 204 ~~~~~~d~~~~~~d~~~~s~~K~~~~-~~~~G~~~~~~~~~~~~l~~~--~-----------~~~~~~------------ 257 (373)
T TIGR03812 204 YNPPPFDFSLPGVQSITIDPHKMGLS-PIPAGGILFRSKSYLKYLSVD--A-----------PYLTVK------------ 257 (373)
T ss_pred CCCCCccccCCCCCEEEECccccCCC-cCCceEEEEeCHHHHhhhccc--C-----------cccCCC------------
Confidence 1125677667899999999996433 777877665 44454444210 0 010000
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRC 472 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~ 472 (632)
..+ . ..||++.+.+.++. .+|+.+.+.|++++.+|+..
T Consensus 258 ~~~--~----------------~~gt~~~~~~~~~~------------------------~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 258 KQA--T----------------ITGTRSGASAAATY------------------------AVIKYLGREGYRKIVAECME 295 (373)
T ss_pred CCc--c----------------eEeechhHHHHHHH------------------------HHHHHhCHHHHHHHHHHHHH
Confidence 000 0 12444555555555 78888888899999999999
Q ss_pred HHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHH
Q 006746 473 LINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 473 L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
++++|++.|+++ | ...++.| ..++|+|.+.+ ...+.+.+.++||.++.+
T Consensus 296 ~~~~l~~~L~~~------g--~~~~~~~-----~~~~v~~~~~~-------~~~v~~~L~~~gi~v~~~----------- 344 (373)
T TIGR03812 296 NTRYLVEELKKI------G--FEPVIEP-----VLNIVAFEVDD-------PEEVRKKLRDRGWYVSVT----------- 344 (373)
T ss_pred HHHHHHHHHHhC------C--CeEEcCC-----CceEEEEEeCC-------HHHHHHHHHHCCceeccC-----------
Confidence 999999999998 3 2334432 45788887754 234554445569988632
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHH
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQ 608 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~ 608 (632)
....+||+|++.++|.+||++|++.|++
T Consensus 345 ----------------------------~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 345 ----------------------------RCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ----------------------------CCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 0235899999999999999999999875
No 43
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.94 E-value=1.1e-24 Score=220.48 Aligned_cols=380 Identities=12% Similarity=0.121 Sum_probs=264.6
Q ss_pred hHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhc-CCCCCCCCCCCCCCCCccccccccccccccccccccchhH
Q 006746 92 QIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQES-SPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESG 170 (632)
Q Consensus 92 ~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~-~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~ 170 (632)
-+..+|. .|. |. ++.||||-.+-|..|+.+..+..+ ...++....-. -|. |.... -.+
T Consensus 18 pl~~lr~-~f~-lp-~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lir-sw~-----------~a~~~------W~~ 76 (407)
T COG3844 18 PLAKLRD-RFA-LP-GGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIR-SWN-----------KAKAD------WFD 76 (407)
T ss_pred chhhhHh-hcc-CC-CCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhh-hhc-----------ccCCc------hhh
Confidence 4567776 476 43 689999999999999655554221 11111000000 011 10000 124
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHH-HHHhhCCCCCCCeEEEec--cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFK-LLAESYPFMSVKNLLTVY--DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~-lv~~sl~~~~gd~ilt~~--d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+-+..-.+++.++||.++ +|+.+.++|.-+. .++.+|..++|+++++.. .+++..... ...++-.|...
T Consensus 77 lp~~lgdklApLiGA~~~--Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a-~g~~~~~~~~~----- 148 (407)
T COG3844 77 LPERLGDKLAPLIGARAG--EVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIA-EGLADLLGIGY----- 148 (407)
T ss_pred chhHHHHHhhhhhcCCCC--ceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhh-cchhhhhcccc-----
Confidence 445778899999999987 6888887777665 455667777788865432 444432221 12222233221
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
+ -.+.+.++++.+++++++ .+|.++|+...||..+++. |..+||++|++++.|-|+++|. .+++|+.+++
T Consensus 149 ~-~~~~~~P~~~~~~~~dd~------AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGa--vp~~Lh~~ga 219 (407)
T COG3844 149 D-LEGVIAPRALEEAITDDV------AVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGA--VPVDLHAAGA 219 (407)
T ss_pred c-ceeeeChHHHHHhhccce------EEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCC--cceeecccCC
Confidence 1 123456778999998764 9999999999999999999 9999999999999999999998 7999999999
Q ss_pred cEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCC
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 406 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~ 406 (632)
||.+.+.||.+...|.+.++|||.++..+...+...| ||...+ +|.+. ..|.
T Consensus 220 DfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsg-----------W~gha~----pf~m~-------------~~y~ 271 (407)
T COG3844 220 DFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSG-----------WWGHAR----PFAME-------------EVYA 271 (407)
T ss_pred CeeeeeeceeccCCCCCceeEEecccccccccccccc-----------ccCCCC----cchhh-------------hccC
Confidence 9999999995544499999999999887765554433 443222 22211 0111
Q ss_pred ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCC
Q 006746 407 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 486 (632)
Q Consensus 407 ~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h 486 (632)
..-++.-.+.||+.+-....|. .+||...+.+|..+.+|...|++++.+-+.....
T Consensus 272 p~~ga~rf~~gt~~V~s~aal~------------------------~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~ 327 (407)
T COG3844 272 PGPGARRFLCGTQPVLSLAALE------------------------GALDIFADVDITELRKKSLALTDYFIELVEARCE 327 (407)
T ss_pred cCccccceeeCCcchhhhHHHh------------------------hhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccc
Confidence 1111111235677777777776 8999999999999999999999999888877632
Q ss_pred CCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcc
Q 006746 487 PNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDRE 566 (632)
Q Consensus 487 ~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~ 566 (632)
...++|.+|...+.||+-|||..+. .+ .|.+.+.+.||..
T Consensus 328 -----~~~l~l~tPr~~~~rGsqvS~~hp~------~~-~V~qaLi~rGVig---------------------------- 367 (407)
T COG3844 328 -----YYGLTLVTPRAHEERGSQVSLYHPH------GY-QVMQALIDRGVIG---------------------------- 367 (407)
T ss_pred -----cCCcEEeccchhhhccceeeEecCc------HH-HHHHHHHHcCccc----------------------------
Confidence 2368899999888999999998774 34 4545555556542
Q ss_pred ccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhhhc
Q 006746 567 AKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
+.+.+.++|+.+ -+|++|+||+.-++.|.+.|+..
T Consensus 368 ------------D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 368 ------------DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred ------------cccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 245678999998 78999999999999999987754
No 44
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=1.2e-24 Score=255.60 Aligned_cols=353 Identities=15% Similarity=0.119 Sum_probs=241.1
Q ss_pred ccCcCCCCceEeecCCCCC----CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHH
Q 006746 101 YYQLSLSNHTCLDYFGIGL----FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMK 176 (632)
Q Consensus 101 f~~L~~~~~vyLD~ag~gl----~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R 176 (632)
|..|..++.+|++|.|.|+ +|..+++++..........-| + .+ ....| .-+.+.+.+
T Consensus 94 ~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytP---Y------------qa--EisQG--~lqal~~~Q 154 (993)
T PLN02414 94 MKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTP---Y------------QA--EIAQG--RLESLLNYQ 154 (993)
T ss_pred HHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCC---C------------ch--HHHHH--HHHHHHHHH
Confidence 4446557889999999999 788887887654321111112 0 01 11122 246778999
Q ss_pred HHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC--CeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccc
Q 006746 177 KRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSV--KNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLR 253 (632)
Q Consensus 177 ~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g--d~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~ 253 (632)
+.|++++|++++ ++.|+.|+|.+.+.++.++++++| ++|++ ..+|+++... +...+++.|++|+.++.+. .
T Consensus 155 t~ia~LtG~~~a--naSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v-~~t~a~~~GieV~~v~~~~-~-- 228 (993)
T PLN02414 155 TMITDLTGLPMS--NASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDV-CQTRADGLGLEVVVADEKD-F-- 228 (993)
T ss_pred HHHHHHhCCChh--hEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHH-HHHhhhhcCCEEEEecchh-h--
Confidence 999999999987 799999999999999988888765 56765 5688875444 4677889999999998741 1
Q ss_pred cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCC-CCCCCCCcEEEE
Q 006746 254 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSF-GLSLVRPDFLIC 331 (632)
Q Consensus 254 i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~l-dls~~~~Df~~~ 331 (632)
+ ...+. -..++.+..|.+|.+.|++ |+++||++|++++| +++.++. ..+ +..++++||+++
T Consensus 229 -~------~~~~~-------v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal--~~l~~pge~GADi~vg 291 (993)
T PLN02414 229 -D------YSSGD-------VCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLAL--TMLKPPGEWGADIVVG 291 (993)
T ss_pred -c------cccCc-------eEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHh--cCCCCHhhccCcEEEE
Confidence 0 01111 1234578888999999999 99999999999999 7766654 344 478899999999
Q ss_pred ccccccCCCCCc-----eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCC
Q 006746 332 SFYQIFGENPSG-----FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 406 (632)
Q Consensus 332 S~hK~~G~~P~G-----~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~ 406 (632)
++|||.+ |.| +|+||||++....+.....|-+++ ......+. .-+.+.+...+ +|
T Consensus 292 sgqKwg~--P~G~GGP~aGflavr~~~~r~~PgriVG~s~d--~~g~~~~~------l~LqtReqhiR---rE------- 351 (993)
T PLN02414 292 SAQRFGV--PMGYGGPHAAFLATSQEYKRLMPGRIIGVSVD--SSGKPALR------MAMQTREQHIR---RD------- 351 (993)
T ss_pred CCCcccc--CCCCCCCCeeEEEECHHHHhhCCCcccCcccC--CCCCcccc------cccccccchhh---hc-------
Confidence 9999873 555 799999998865444345541111 00000000 00111110011 23
Q ss_pred ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH-----HHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 407 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD-----QVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 407 ~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd-----~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
.||.|+...++|. +++. ++-..|+++|.+|+..|+.+|.++|
T Consensus 352 ---------kaTsNict~qaL~------------------------A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L 398 (993)
T PLN02414 352 ---------KATSNICTAQALL------------------------ANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGL 398 (993)
T ss_pred ---------ccccchhHHHHHH------------------------HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 3455665556664 4443 2334799999999999999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 561 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~ 561 (632)
.++ | +++.++ ....+|+|.+.+ +..|.+.+.++||.++.-
T Consensus 399 ~~~------G---~~~~~~----~~f~~vt~~~~~-------~~~v~~~L~~~gI~l~~~-------------------- 438 (993)
T PLN02414 399 KKL------G---FQVQSL----PFFDTVKVKCSD-------ADAIADAAAKVGINLRVV-------------------- 438 (993)
T ss_pred hhc------C---CccCCC----CCcCeEEEecCC-------HHHHHHHHHHCCCeeEEe--------------------
Confidence 876 4 455444 235589998742 355555556689987621
Q ss_pred hhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHH
Q 006746 562 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQ 608 (632)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~ 608 (632)
..+.||+|++.+||.+||++|+++|+.
T Consensus 439 --------------------~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 439 --------------------DANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred --------------------cCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 124799999999999999999999974
No 45
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.93 E-value=7.4e-24 Score=213.14 Aligned_cols=325 Identities=16% Similarity=0.133 Sum_probs=250.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
-++++++++-+...|.... .+.+++..+++.|++.++-++ +.|||+||. ...-.+ ..| +..+++.|++|..++.
T Consensus 49 ~qIm~~v~egikyVFkT~n-~~tf~isgsGh~g~E~al~N~-lePgd~vLv~~~G~wg--~ra-~D~~~r~ga~V~~v~~ 123 (385)
T KOG2862|consen 49 VQIMDEVLEGIKYVFKTAN-AQTFVISGSGHSGWEAALVNL-LEPGDNVLVVSTGTWG--QRA-ADCARRYGAEVDVVEA 123 (385)
T ss_pred HHHHHHHHHHHHHHhccCC-CceEEEecCCcchHHHHHHhh-cCCCCeEEEEEechHH--HHH-HHHHHhhCceeeEEec
Confidence 5788999999999999874 478999999999999999998 789999764 445443 334 6778999999999999
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc-hH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP-YL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR 325 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p-l~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~ 325 (632)
+|.. .+..++|+++|..++ +++|+++|..+.||+.+| ++ ...+||+++++++||+++++|. .++-.++|+
T Consensus 124 ~~G~-~~~le~i~~~lsqh~-----p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlgg--t~F~mDewg 195 (385)
T KOG2862|consen 124 DIGQ-AVPLEEITEKLSQHK-----PKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGG--TEFEMDEWG 195 (385)
T ss_pred Cccc-CccHHHHHHHHHhcC-----CceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCC--ccceehhhc
Confidence 8554 589999999999864 799999999999999999 55 7789999999999999888766 488899999
Q ss_pred CcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccc---ccccccccccCCCCCCccccchhhhhhhccc
Q 006746 326 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPA---KKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 402 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~---~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt 402 (632)
+|++...++|.+|. |.|++.+..+++++++++.+..+ .+..+.. ...||..+. + +..+ .
T Consensus 196 VDvaytgSQKaL~a-P~GLsiisfS~ka~~~~~~rK~~-~~~~yFd~~~~~~~wgc~~------e----~~~y----h-- 257 (385)
T KOG2862|consen 196 VDVAYTGSQKALGA-PAGLSIISFSDKALEAIRDRKTK-PVSFYFDILRLGNFWGCDG------E----PRAY----H-- 257 (385)
T ss_pred ccEEEecchhhcCC-CCCcceeecCHHHHHHHhhccCC-ceEEEEeHHhhcchhccCC------c----cccc----c--
Confidence 99999999999987 99999999999998888665332 2222211 123442221 0 0111 1
Q ss_pred cCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Q 006746 403 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 482 (632)
Q Consensus 403 ~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~ 482 (632)
-|+.+..+++|+ +||+++.+.|++++.+|++++++||+.+|.
T Consensus 258 --------------hT~pv~lly~Lr------------------------~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~ 299 (385)
T KOG2862|consen 258 --------------HTPPVQLLYSLR------------------------AALALIAEEGLENSWRRHREMSKWLKLSLE 299 (385)
T ss_pred --------------cCCcHHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 245566788898 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcEEEECCCCCCCCCcEEE-EEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 483 KLQHPNTEGNALVKIYGPKIRFDRGPALA-FNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 483 ~l~h~~~~G~p~v~Iygp~~~~~rg~iva-Fnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
++ |..++. - +++.|.+.|+ ..++. | +|+..|.. +..++++.++.|.
T Consensus 300 ~~------GLq~fv---~-~e~~rlptvttv~vp~--g--vDw~dVv~~~~~~~~vei~ggl------------------ 347 (385)
T KOG2862|consen 300 AL------GLQLFV---V-DEELRLPTVTTVKVPY--G--VDWKDVVAYAMSHYVVEIGGGL------------------ 347 (385)
T ss_pred Hh------Ccccee---c-ChhhccCcceeeecCC--C--CCHHHHHHHHHHhcCEEecccc------------------
Confidence 98 655442 2 2356666554 34443 2 67777765 4566688887652
Q ss_pred hhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.....++||.+ |-..|-|-|++.++.|+.-|..
T Consensus 348 ------------------g~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 348 ------------------GPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ------------------CCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 112335899985 8888999999999988876543
No 46
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.93 E-value=9.3e-24 Score=229.61 Aligned_cols=368 Identities=11% Similarity=-0.001 Sum_probs=230.1
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
.+.+.|..+..+..++.++++............| |+.+. . -| ..++.+++++.+++++|++
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~----------~----~g--~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTP---YQPEI----------S----QG--RLQALFELQTMLCELTGMD 80 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccccCcccCCC---CChhh----------h----hh--HHHHHHHHHHHHHHHHCCC
Confidence 3458888888887777777664332210000000 00000 0 01 2367789999999999997
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCC--CCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHH
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMS--VKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~--gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
++ .++|+.|++.+.+.++.+....+ ||+|++.. .|++ ....+....++.|++++.++.+ +.+.++.+++++++
T Consensus 81 ~~--~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~-~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i 156 (398)
T cd00613 81 VA--NASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPT-NPAVARTRGEPLGIEVVEVPSD-EGGTVDLEALKEEV 156 (398)
T ss_pred cc--ceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcc-hHHHHHHhcccCCcEEEEeccC-CCCCcCHHHHHHhc
Confidence 65 57788877766555544443444 89977654 5655 3333333445667999999886 45578999999988
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccch-H-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCC
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPY-L-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl-~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
.++ ++++++++.+ .+|...|+ + |.++|+++|+++++|++|..+. ...+...+++|++++|+||+++ |
T Consensus 157 ~~~------t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~--~~~~~~~~~~d~~~~s~~K~~~--p 225 (398)
T cd00613 157 SEE------VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT--GLKPPGEYGADIVVGNLQKTGV--P 225 (398)
T ss_pred CCC------eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEecccccc--CCCChHHcCCCEEEeeccccCC--C
Confidence 654 4889999875 79999996 8 9999999999999999987655 3555667889999999999873 3
Q ss_pred -----CceEEEEEeCCCccccCCCCCC-CceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhh
Q 006746 342 -----SGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQ 415 (632)
Q Consensus 342 -----~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~ 415 (632)
.|.|+++++++.++.+.+...| +... . ... .|.. .+.......+ ++.++.+..+...
T Consensus 226 ~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~------~~~~~~~~~r---~e~~~~~~~~~~~----- 288 (398)
T cd00613 226 HGGGGPGAGFFAVKKELVRFLPGRLVGVTKDA-E-GNR-AFRL------ALQTREQHIR---REKATSNICTGQA----- 288 (398)
T ss_pred CCCCCCceeEEEEhhhhHhhCCCCeecccccc-C-CCc-ceEE------ecccchhhcc---cccccccceecHH-----
Confidence 4789999999887766554333 1100 0 000 0100 0000000001 1234433221110
Q ss_pred cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE
Q 006746 416 SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV 495 (632)
Q Consensus 416 ~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v 495 (632)
...+.. ..+++.+...|++++.+|.+.+.++|+++|.++ + ..
T Consensus 289 ------~~~~~a------------------------~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~------~--~~ 330 (398)
T cd00613 289 ------LLALMA------------------------AMYIVYLGPEGLKEIAERAHLNANYLAKRLKEV------G--GV 330 (398)
T ss_pred ------HHHHHH------------------------HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhc------C--Cc
Confidence 111111 144555556688999999999999999999987 2 22
Q ss_pred EEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccc
Q 006746 496 KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNR 575 (632)
Q Consensus 496 ~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 575 (632)
.+ +. ..+.+++.|.+....| .+...+.+.+.++||.+..-
T Consensus 331 ~~--~~--~~~~~~v~~~~~~~~~--~~~~~~~~~L~~~gi~~~~~---------------------------------- 370 (398)
T cd00613 331 LP--FN--GPFFHEFVLRLPPLYG--IRAEDLAKALIDGGFHAPTM---------------------------------- 370 (398)
T ss_pred cc--CC--CCeeEEEEEEcCCcch--HHHHHHHHhhhhcCcccccc----------------------------------
Confidence 21 21 2345677777653111 23455555555667754210
Q ss_pred cccCCCCCcEEEEccCCCCCHHHHHHHHHHH
Q 006746 576 KDKANLGITVVTASLGYLANFEDVYRLWAFV 606 (632)
Q Consensus 576 ~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l 606 (632)
...+.+.||+|+++|||.|||+++++.|
T Consensus 371 ---~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 371 ---YLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ---ccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 0013469999999999999999999764
No 47
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.92 E-value=3e-23 Score=224.22 Aligned_cols=333 Identities=12% Similarity=0.089 Sum_probs=218.0
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
...=|||++....+.+.+++++..+..+. |. +. .+...++..+| ..+.++++|++|++++|++
T Consensus 10 ~s~~YL~~~~~~~~~~~~~~~~~~~~~~~----p~--~~---------~~~~gs~~~~g--~~~~~~~~e~~la~~~~~~ 72 (370)
T PRK05937 10 VTNDFLGFSRSDTLVHEVEKRYRLYCRQF----PH--AQ---------LGYGGSRAILG--PSSLLDDLEHKIAHFHGAP 72 (370)
T ss_pred ECCCccCCCCCHHHHHHHHHHHHHhcccc----CC--CC---------CCCCCcCcccC--ChHHHHHHHHHHHHHhCCC
Confidence 44569999999999999999988765322 10 00 01111121111 3578999999999999995
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhc
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 266 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~ 266 (632)
. .++|+++.+..+ .++..+ .++|+.|++...+|......+.. ..|..+. + + ..|+++|+++|+..
T Consensus 73 ~---~l~~~sG~~a~~-~~~~~~-~~~~d~ii~d~~~H~sv~~~~~~---~~~~~~~---~--~--~~d~~~l~~~l~~~ 137 (370)
T PRK05937 73 E---AFIVPSGYMANL-GLCAHL-SSVTDYVLWDEQVHISVVYSLSV---ISGWHQS---F--R--HNDLDHLESLLESC 137 (370)
T ss_pred e---EEEECChHHHHH-HHHHHh-CCCCCEEEEEhhhhHHHHHHHHH---cCCceEE---e--c--CCCHHHHHHHHHhh
Confidence 2 588887775444 344444 35677777755444323333322 1243332 2 2 35789999998753
Q ss_pred CcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC----CCC---CcEEEEccccccC
Q 006746 267 GKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS----LVR---PDFLICSFYQIFG 338 (632)
Q Consensus 267 ~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls----~~~---~Df~~~S~hK~~G 338 (632)
.+..+.+.++++++++|.+|.+.|++ |.++|+++|++++||++|++|+ ...+.. .++ .|.++.+++|++|
T Consensus 138 ~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~--~g~~g~g~~~~~~~~~~~~~~~tlsK~~g 215 (370)
T PRK05937 138 RQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGI--FGDDGKGFCHSLGYENFYAVLVTYSKALG 215 (370)
T ss_pred hccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccc--cCCCCCchHHhhCCCCCcEEEEechhhhh
Confidence 21112457888999999999999999 9999999999999999999875 344432 233 2356788899999
Q ss_pred CCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCC
Q 006746 339 ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGK 418 (632)
Q Consensus 339 ~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt 418 (632)
|.|.|+|+.++ ....+.... . . + .+ .++
T Consensus 216 --~~G~~vl~~~~-~~~~~~~~~-~----------~-~-----------------~~--------------------s~~ 243 (370)
T PRK05937 216 --SMGAALLSSSE-VKQDLMLNS-P----------P-L-----------------RY--------------------STG 243 (370)
T ss_pred --cCceEEEcCHH-HHHHHHHhC-C----------C-C-----------------ee--------------------cCC
Confidence 88999988754 222111100 0 0 0 00 111
Q ss_pred cccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEE
Q 006746 419 LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY 498 (632)
Q Consensus 419 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iy 498 (632)
.+.+.+.++. .+++++.+.| +.+.+|++.|.+++.+.|... + +
T Consensus 244 ~~~~~~~a~~------------------------aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~------~-~----- 286 (370)
T PRK05937 244 LPPHLLISIQ------------------------VAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA------A-P----- 286 (370)
T ss_pred CCHHHHHHHH------------------------HHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC------C-C-----
Confidence 2333455555 8999998877 667889999999998877432 1 1
Q ss_pred CCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccccc
Q 006746 499 GPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 578 (632)
Q Consensus 499 gp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 578 (632)
+.++.|.+.+ +....+.+.+.++||.++. +|.+
T Consensus 287 --------~~~~~i~~~~-----~~~~~~~~~L~~~gi~v~~--~~~~-------------------------------- 319 (370)
T PRK05937 287 --------GCVQPIFLPG-----ISEQELYSKLVETGIRVGV--VCFP-------------------------------- 319 (370)
T ss_pred --------CCEEEEEeCC-----hhHHHHHHHHHHCCeeEEe--eCCC--------------------------------
Confidence 1233455554 3556777778888998863 3321
Q ss_pred CCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 579 ANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 579 ~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||+|+|++||.|||++|++.|+++++.
T Consensus 320 ---~~~~iRis~~~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 320 ---TGPFLRVNLHAFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred ---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1358999999999999999999999987643
No 48
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.92 E-value=4e-23 Score=207.11 Aligned_cols=383 Identities=15% Similarity=0.156 Sum_probs=269.3
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
++.+||=-.+.||+|++..+.+...++.+. ++..| +.......+- ..-+-+-..++.++||.
T Consensus 66 ~~~iYlcGNSLGLmPK~t~~~~~~eLDkWa--------k~av~------gH~~GkvPW~----~~De~il~l~~~iVGA~ 127 (465)
T KOG3846|consen 66 KPVIYLCGNSLGLMPKSTRNSINAELDKWA--------KCAVE------GHFKGKVPWV----SIDEPILPLLAPIVGAQ 127 (465)
T ss_pred CCeEEEeccccccCchhhHhHHHHHHHHHH--------hhhhh------ccccccccee----ecchhhhhhhhhhccCC
Confidence 568999999999999999988776554331 11111 1111111110 11235677889999999
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCC---eEEEe-ccccchhhHHHHHHHHhcCCEEE----EEeccCCccccCHHH
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVK---NLLTV-YDYESEAVEAMIRTSEKRGARVM----SAEFSWPRLRINSEK 258 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd---~ilt~-~d~~s~~v~~~~~~a~~~G~~v~----~v~~~~~~~~i~~~~ 258 (632)
++ +|...++-|..++.+.-+| ++|.. +||+. -.++|.-. .+..-++-+|..+. .+........+..++
T Consensus 128 e~--EvavmNsLTvNlh~Ll~sF-yKPTekR~KILlE~kaFPSDhY-AiesQ~~lhG~~~e~sm~~iePREGEetlRteD 203 (465)
T KOG3846|consen 128 EN--EVAVMNSLTVNLHSLLISF-YKPTEKRFKILLEKKAFPSDHY-AIESQCKLHGISPENSMIQIEPREGEETLRTED 203 (465)
T ss_pred ch--hhhhHhhhhhHHHHHHHHh-cCCcchhhhhhhccCCCCchHH-HHHhhhhhcCCChHHheEEecccccccchhHHH
Confidence 77 6888899999999999998 66544 36543 34555322 33334466776542 233222444577899
Q ss_pred HHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccc
Q 006746 259 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIF 337 (632)
Q Consensus 259 l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~ 337 (632)
|.+.|.++. ....||+|+.+...||..+++. |...-|..|++|-.|-|+++|. .+|-|+.|++||.+..+||.+
T Consensus 204 ILd~IEkng---DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgN--VpL~LHdWgVDFACWCSYKYl 278 (465)
T KOG3846|consen 204 ILDTIEKNG---DEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGN--VPLQLHDWGVDFACWCSYKYL 278 (465)
T ss_pred HHHHHHhcC---CeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcC--CceEEeecCCceEEEeeeccc
Confidence 999998653 5689999999999999999999 8866677899999999999997 699999999999999999954
Q ss_pred CCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcC
Q 006746 338 GENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSG 417 (632)
Q Consensus 338 G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~G 417 (632)
..+|.|+|.|+|..+......|...| ||..+ .+.+|.++. ..+...|... .|..
T Consensus 279 naGaGgIgGlFvHekh~~~~~prl~G-----------Wwgh~--~s~RF~Mdn----vl~lipGa~G---------fRiS 332 (465)
T KOG3846|consen 279 NAGAGGIGGLFVHEKHTKESLPRLAG-----------WWGHD--PSKRFQMDN----VLELIPGALG---------FRIS 332 (465)
T ss_pred ccCCCccceeeeehhhhcchhhHHhh-----------hccCC--cchhhhhcc----ccccCccccc---------cccC
Confidence 33499999999999887666665443 44322 222333221 0011122222 2566
Q ss_pred CcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCC---CCCc
Q 006746 418 KLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTE---GNAL 494 (632)
Q Consensus 418 t~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~---G~p~ 494 (632)
+|.+-...+|. .+|+..++..|+++.+|...|+.||..-++..+..++. -.+.
T Consensus 333 NPpi~~v~al~------------------------~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~ 388 (465)
T KOG3846|consen 333 NPPIIDVVALR------------------------SSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLF 388 (465)
T ss_pred CCcHhHHHHHH------------------------hhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhccee
Confidence 77777788887 89999999999999999999999998887776544322 3467
Q ss_pred EEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccc
Q 006746 495 VKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNN 574 (632)
Q Consensus 495 v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 574 (632)
+.|..|..-.+||--+++.+..+ .+...|.| .++|+..
T Consensus 389 ~~IiTP~~~~erGcQLsl~Fssp-----~~~vfqeL-~krGv~~------------------------------------ 426 (465)
T KOG3846|consen 389 FTIITPTSTDERGCQLSLYFSSP-----TPKVFQEL-HKRGVIG------------------------------------ 426 (465)
T ss_pred EEEeCCcccccccceEEEEeCCC-----chHHHHHH-HHcCeec------------------------------------
Confidence 89999987678898888776542 23334444 3444432
Q ss_pred ccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 575 RKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 575 ~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+.+.+||+.+ +.||||.|||+++..|.+.+|.
T Consensus 427 ----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 427 ----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred ----cccCCCceEeecchhhccHHHHHHHHHHHHHHHHH
Confidence 234567999997 8999999999999999998875
No 49
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.92 E-value=7.3e-24 Score=225.75 Aligned_cols=287 Identities=14% Similarity=0.081 Sum_probs=208.7
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--C-C--------CCC--eEEEec-cccchhhHHHHH
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--F-M--------SVK--NLLTVY-DYESEAVEAMIR 233 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--~-~--------~gd--~ilt~~-d~~s~~v~~~~~ 233 (632)
..++++++++.+++++|++..+.+++||+|+|+|+.+++.++. + . +++ .|+++. .|.+ + ..
T Consensus 36 ~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~--~---~~ 110 (345)
T cd06450 36 ATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS--V---EK 110 (345)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH--H---HH
Confidence 4578889999999999997333479999999999999887762 1 1 233 455554 5543 2 23
Q ss_pred HHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC
Q 006746 234 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG 312 (632)
Q Consensus 234 ~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~ 312 (632)
.++..|++++.++.+ +++.+++++|+++|.+......+++++++++.+|.||...|++ |+++|+++|+++++|+++..
T Consensus 111 ~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~ 189 (345)
T cd06450 111 AAAYLDVKVRLVPVD-EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGG 189 (345)
T ss_pred HHHHHhcCeEEeeeC-CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhH
Confidence 345569999999987 5568999999999976211112458899999999999999999 99999999999999999887
Q ss_pred CCCCCCCCC------CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCC
Q 006746 313 PKDMDSFGL------SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 313 g~~m~~ldl------s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
+. .+++. ...++|++++|+||+++. |.|+|+++++ .. ..|
T Consensus 190 ~~--~~~~~~~~~~~~~~~~d~~~~s~~K~l~~-p~g~g~~~~~----------~~-----------~~~---------- 235 (345)
T cd06450 190 FL--LPFPEPRHLDFGIERVDSISVDPHKYGLV-PLGCSAVLVR----------AL-----------KLW---------- 235 (345)
T ss_pred HH--hhChhhHHHhcCccccCEEEEchhHhhCC-CcchHHHHHH----------HH-----------HHH----------
Confidence 65 23221 123789999999997664 8899999887 00 000
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 466 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I 466 (632)
.+++.+...|++.+
T Consensus 236 ------------------------------------------------------------------~~l~~l~~~g~~~~ 249 (345)
T cd06450 236 ------------------------------------------------------------------ATLRRFGRDGYGEH 249 (345)
T ss_pred ------------------------------------------------------------------HHHHHHhHHHHHHH
Confidence 45566666789999
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCCh
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
.+|...+++++.+.|.++ +.++++++. +.++++|.+.+.....++...+.+.+.++|+.+..+..
T Consensus 250 ~~~~~~~~~~l~~~L~~~--------~~~~~~~~~----~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~--- 314 (345)
T cd06450 250 IDRIVDLAKYLAELIRAD--------PGFELLGEP----NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATT--- 314 (345)
T ss_pred HHHHHHHHHHHHHHHhcC--------CCeEEecCC----ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeE---
Confidence 999999999999999987 567887653 47899998865200013445565555566554432210
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCC-CCHHHHHHHHHHHHH
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYL-ANFEDVYRLWAFVAQ 608 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~-~t~eDV~rlv~~l~~ 608 (632)
....+++|+|++.+ ||.+||++|++.|++
T Consensus 315 ---------------------------------~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 315 ---------------------------------LGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ---------------------------------ECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 00235899999986 599999999999875
No 50
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.91 E-value=1.1e-21 Score=211.17 Aligned_cols=209 Identities=11% Similarity=0.027 Sum_probs=162.6
Q ss_pred CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc-ccccccchhHHHHHHHHHHHHHcCCCCCCccEEEe
Q 006746 117 IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNISENDYGMVFT 195 (632)
Q Consensus 117 ~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s-~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft 195 (632)
.+++...+++++..|... ++|+++ ....+......+.+.++++++++|+ + .+++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~--~i~~~ 65 (361)
T cd06452 10 GGRLTPEARKALIEWGDG--------------------YSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--D--EARVT 65 (361)
T ss_pred CCCCCHHHHHHHHHHhcc--------------------cCCccccccccccccCchHHHHHHHHHHHcCC--c--eEEEe
Confidence 457888888887775421 134432 1112222345788999999999999 2 58999
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCC-ccccCHHHHHHHHHhcCcC-CCc
Q 006746 196 ANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWP-RLRINSEKLRKMVVSKGKK-KKQ 272 (632)
Q Consensus 196 ~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~-~~~i~~~~l~~~i~~~~~~-~~~ 272 (632)
+|+|+|+.+++.++ .++||+|++. ..|.+. ...++..|++++.++.++. ++.++++++++++.+..+. .++
T Consensus 66 ~g~t~al~~~l~~~-~~~gd~Vl~~~~~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 139 (361)
T cd06452 66 PGAREGKFAVMHSL-CEKGDWVVVDGLAHYTS-----YVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKP 139 (361)
T ss_pred CCHHHHHHHHHHHh-cCCCCEEEEcCCcchHH-----HHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCC
Confidence 99999999999998 7899998765 566652 2346778999999998742 2478999999998742110 124
Q ss_pred eeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeC
Q 006746 273 RGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 273 ~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
++++++++.+|.||...|++ |+++|+++|+++++|+++..|. .+++...++.|++++|+||++|. |.++|++++++
T Consensus 140 ~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~--~~~~~~~~~~d~~~~s~~K~l~~-~~~~G~l~~~~ 216 (361)
T cd06452 140 PALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGR--MPVSGKELGADFIVGSGHKSMAA-SAPIGVLATTE 216 (361)
T ss_pred ceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCC--cCCCHHHcCCCEEEecCCccccC-CCCeEEEEECH
Confidence 68999999999999999999 9999999999999999999876 46777778899999999998875 77999999998
Q ss_pred CCccccC
Q 006746 352 STVPILV 358 (632)
Q Consensus 352 ~~~~~L~ 358 (632)
+.++.+.
T Consensus 217 ~~~~~l~ 223 (361)
T cd06452 217 EWADIVF 223 (361)
T ss_pred HHHHHHh
Confidence 8776653
No 51
>PLN03032 serine decarboxylase; Provisional
Probab=99.91 E-value=4.4e-22 Score=214.28 Aligned_cols=219 Identities=14% Similarity=0.102 Sum_probs=172.0
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
+...||=|--..-+.+++++++..++.+ ..+||.+.+.+|..+.++++++++.++++||++
T Consensus 22 ~~~~~~gy~~~~~~~~~~~~~~~~~~~~-------------------~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 22 KSSVHFGYPYNLDFDYGELSQLMKYSIN-------------------NLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred hhhhccCCCchhccChHHHHHHHHhccc-------------------CCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 3455666666666777788887765432 127888877788888999999999999999999
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
++++.-+||+++|+|..+...+.. ..++..|+++ .+|+| + ...++..|.+++.||++ +++.+|+++|+++|+
T Consensus 83 ~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~S--v---~kaa~~lg~~~~~V~~d-~~g~id~~~L~~~i~ 156 (374)
T PLN03032 83 KDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYS--V---FKAARMYRMEAVKVPTL-PSGEIDYDDLERALA 156 (374)
T ss_pred CccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeH--H---HHHHHHcCCCCeEeeeC-CCCcCcHHHHHHHHH
Confidence 875445999999999988765532 1234466554 56765 2 23456678889999998 789999999999998
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCC-----cEEEEeccccCCCCCCC-------CCCCCCCCcEEEE
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEND-----WHILIDACALGPKDMDS-------FGLSLVRPDFLIC 331 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g-----~~vlvDaaq~~g~~m~~-------ldls~~~~Df~~~ 331 (632)
+++ ..+.++++++.++.||.+.|++ |+++|+++| ++++||||+.++. .+ +|+. .++|.+++
T Consensus 157 ~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~--~p~~~~~~~~~~~-~~vDSis~ 230 (374)
T PLN03032 157 KNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLM--MPFVSRAPEVTFR-KPIGSVSV 230 (374)
T ss_pred HcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhh--hhccCCCcccCCC-cCCcEEEE
Confidence 743 2467999999999999999999 999999986 5899999998865 33 3554 47999999
Q ss_pred ccccccCCCCCceEEEEEeCCCcccc
Q 006746 332 SFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 332 S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
|+||++|. |.|+|+|++|++.++.+
T Consensus 231 s~HK~~g~-P~g~G~ll~r~~~~~~~ 255 (374)
T PLN03032 231 SGHKFLGC-PMPCGVALTRKKHVKAL 255 (374)
T ss_pred CcccccCC-CcCeEEEEEEchhhHhh
Confidence 99999998 99999999998765443
No 52
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=2.9e-22 Score=216.05 Aligned_cols=324 Identities=13% Similarity=0.109 Sum_probs=226.2
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCccE
Q 006746 113 DYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGM 192 (632)
Q Consensus 113 D~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~v 192 (632)
=+-|.++.|+.+++++..+... | . ...++++++++.+++++|++ .+
T Consensus 18 t~~g~s~~~~~v~~a~~~~~~~------------------~-----------~-~~~~~~~~~~~~~a~~~g~~----~~ 63 (363)
T TIGR01437 18 TILGVSTVSDEVADAQKRGAQN------------------Y-----------F-EIKELVNKTGEYIANLLGVE----DA 63 (363)
T ss_pred ecCCCCCCCHHHHHHHHHHHhc------------------C-----------C-CHHHHHHHHHHHHHHhhCCC----eE
Confidence 4556778999999998764311 0 0 13477899999999999985 47
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCC---------------eEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHH
Q 006746 193 VFTANRTSAFKLLAESYPFMSVK---------------NLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSE 257 (632)
Q Consensus 193 vft~naT~al~lv~~sl~~~~gd---------------~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~ 257 (632)
++|+|+|+|+.+++.++ +++|| +|+++..|..+............|+++++++.+ +.++++
T Consensus 64 ~~~~g~t~al~~al~al-~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~ 139 (363)
T TIGR01437 64 VIVSSASAGIAQSVAAV-ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAE 139 (363)
T ss_pred EEEcCHHHHHHHHHHHH-hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHH
Confidence 99999999999999998 77887 766655444322111133456689999999874 358999
Q ss_pred HHHHHHHhcCcCCCceeEEE-EeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccc
Q 006746 258 KLRKMVVSKGKKKKQRGLFV-FPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQ 335 (632)
Q Consensus 258 ~l~~~i~~~~~~~~~~~Lv~-~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK 335 (632)
+++++|+++| ++++ ++..++++|...|++ |+++||++|+++++|++|.... . ..-.+++|++++|+||
T Consensus 140 ~le~ai~~~t------~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~--~--~~~~~g~D~~~~S~~K 209 (363)
T TIGR01437 140 QLEAAITEKT------AAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL--Q--KYYRLGADLVIYSGAK 209 (363)
T ss_pred HHHHhcChhc------eEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch--H--HHHHcCCCEEEEeCCc
Confidence 9999998765 5444 555678999999999 9999999999999999997422 1 0113468999999999
Q ss_pred ccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhh
Q 006746 336 IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQ 415 (632)
Q Consensus 336 ~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~ 415 (632)
+++. |+ .|+|+.+++.++.+.+...| ... .+ +.++
T Consensus 210 ~l~g-p~-~G~l~~~~~~i~~~~~~~~~-~~~--------------------------~~---~~~~------------- 244 (363)
T TIGR01437 210 AIEG-PT-SGLVLGKKKYIEWVKLQSKG-IGR--------------------------AM---KVGK------------- 244 (363)
T ss_pred ccCC-Cc-eEEEEEcHHHHHHHHhccCC-Ccc--------------------------ee---ccCH-------------
Confidence 5543 87 78888877766555432222 100 00 0111
Q ss_pred cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE
Q 006746 416 SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV 495 (632)
Q Consensus 416 ~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v 495 (632)
..+.++. ++++.+.+.|.+.+.++.+.+. ++++.|.++ |.+
T Consensus 245 ------~~~~gl~------------------------aAl~~~~~~~~~~~~~~~~~~~-~l~~~L~~i--------~g~ 285 (363)
T TIGR01437 245 ------ENILGLT------------------------AALEQYLSTGKESGAEMVAKLT-PFIEALNTL--------KGV 285 (363)
T ss_pred ------HHHHHHH------------------------HHHHHHHccCcccHHHHHHHHH-HHHHHHhcC--------CCe
Confidence 1135555 8899888888888888887644 699999987 678
Q ss_pred EEECCCCCCCC---CcEEEEEEccCCCCccCHHHHHHHHHhCC--cEEccCccCChHHHhHHHHhhhhhhhhhhcccccc
Q 006746 496 KIYGPKIRFDR---GPALAFNVFDWKREKIEPVLVQKLADREN--ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSK 570 (632)
Q Consensus 496 ~Iygp~~~~~r---g~ivaFnv~~~~G~~i~~~~V~kla~~~g--I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 570 (632)
+++.+...... ...|+|+... .| +++..+.+.+.+.| |.+|. +
T Consensus 286 ~~~~~~~~~~~~~~~~~v~~~~~~-~g--~~~~~l~~~L~~~~~~I~~r~-----------~------------------ 333 (363)
T TIGR01437 286 SASIVQDEAGRDIARAEIRFDESE-LG--MTAADVVQALRQGEPAIYTRG-----------Y------------------ 333 (363)
T ss_pred EEEEecCCCCCcCceEEEEEeccC-CC--CCHHHHHHHHhcCCCCEEEee-----------e------------------
Confidence 88854321111 2446666532 12 78888888887666 66653 0
Q ss_pred ccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 571 SDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 571 ~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
....+.||+++.. +|++|++++++.|++++
T Consensus 334 ---------~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 334 ---------KANEGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred ---------eecCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 1235689999886 55999999999998864
No 53
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=2.5e-22 Score=237.12 Aligned_cols=358 Identities=14% Similarity=0.086 Sum_probs=239.6
Q ss_pred ccCcCCCCceEeecCCCCCCCH---HHH-HHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHH
Q 006746 101 YYQLSLSNHTCLDYFGIGLFSY---NQL-HKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMK 176 (632)
Q Consensus 101 f~~L~~~~~vyLD~ag~gl~~~---~~~-~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R 176 (632)
|..|..+|++|-.+.|.|.++. +++ +.+... |.+| + +|+.=-| ...+|. -+.+-+.+
T Consensus 67 ~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~--------~~~~------t-~ytPyQ~--EisQG~--Leal~~~Q 127 (954)
T PRK05367 67 LRAIASKNKVFRSYIGQGYYGTHTPPVILRNILEN--------PAWY------T-AYTPYQP--EISQGR--LEALLNFQ 127 (954)
T ss_pred HHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhC--------cchh------h-ccCCCCh--HHHHHH--HHHHHHHH
Confidence 4446556777777788887765 555 433331 2111 1 1111111 122232 36777999
Q ss_pred HHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC--CeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccc
Q 006746 177 KRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSV--KNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLR 253 (632)
Q Consensus 177 ~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g--d~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~ 253 (632)
+.+++++|+++. ++.++.++|++.+.++.+++++++ ++|++ ..+|+++... +...++..|++|+.++.+ .+
T Consensus 128 t~la~LtG~~~a--naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v-~~t~a~~~G~ev~~~~~~-~d-- 201 (954)
T PRK05367 128 TMVADLTGLEIA--NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDV-LRTRAEPLGIEVVVGDAA-KA-- 201 (954)
T ss_pred HHHHHHHCCChh--hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHH-HHHHHHhCCCEEEEecCc-cC--
Confidence 999999999976 689999999999999999988875 78765 5688875444 467788999999999874 21
Q ss_pred cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEc
Q 006746 254 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICS 332 (632)
Q Consensus 254 i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S 332 (632)
++ .+ . -..++.+..|.+|.+.|++ |+++||++|++++||+.+.+.. ...+..++++||++++
T Consensus 202 ~~--------~~------~-~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~--~l~~pge~GaDi~vgs 264 (954)
T PRK05367 202 LD--------HD------D-VFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALT--LLTPPGEMGADIAVGS 264 (954)
T ss_pred CC--------cc------c-EEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhcc--CCCChhhcCCCEEEee
Confidence 11 11 1 2446778889999999999 9999999999999999664433 1235678999999999
Q ss_pred cccc-----cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCc
Q 006746 333 FYQI-----FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 407 (632)
Q Consensus 333 ~hK~-----~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~ 407 (632)
+||| ||. | |.|+|+||++....+.+...|=.++. .....+ .-.+.+.+..-+ +|.
T Consensus 265 ~qkfg~P~g~GG-P-~aGflavr~~~~r~lpgrivG~s~d~--~g~~~~------~lalqtReqhiR---rek------- 324 (954)
T PRK05367 265 AQRFGVPMGFGG-P-HAAYFAVRDAYKRSMPGRIVGVSVDA--AGNPAL------RLALQTREQHIR---REK------- 324 (954)
T ss_pred CcccCCCCCCCC-C-CEEEEEECHHHHhhCCCCeeeeeccc--CCCccc------cccccccccccc---ccc-------
Confidence 9998 775 5 79999999998777876655400000 000000 000111111011 233
Q ss_pred cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCC
Q 006746 408 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 487 (632)
Q Consensus 408 ~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~ 487 (632)
||.|+...++|. ..+...-+.++...|+++|.+|+..|+++|.++|.+.
T Consensus 325 ---------aTsNict~qaL~-------------------a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~--- 373 (954)
T PRK05367 325 ---------ATSNICTAQVLL-------------------AVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL--- 373 (954)
T ss_pred ---------cccccchHHHHH-------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc---
Confidence 444554444432 0000012355677899999999999999999999775
Q ss_pred CCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccc
Q 006746 488 NTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREA 567 (632)
Q Consensus 488 ~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 567 (632)
| +++..+ ....+++|.+. .++..|.+.+.++||.++.
T Consensus 374 ---G---~~~~~~----~~f~~~~~~~~------~~~~~i~~~l~~~gi~~~~--------------------------- 410 (954)
T PRK05367 374 ---G---LEVVHD----SFFDTLTVEVG------GDAAAVLARALAAGINLRR--------------------------- 410 (954)
T ss_pred ---C---cccCCC----CCCCeEEEeCC------CCHHHHHHHHHHCCceecc---------------------------
Confidence 4 333333 24468888753 2567777777778988741
Q ss_pred cccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 568 KSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
...+.||+|++.+||.+||++|++.++
T Consensus 411 -------------~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 -------------VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -------------ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 113579999999999999999999997
No 54
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.90 E-value=4.8e-21 Score=207.09 Aligned_cols=211 Identities=11% Similarity=0.078 Sum_probs=159.8
Q ss_pred CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeC
Q 006746 117 IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTA 196 (632)
Q Consensus 117 ~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~ 196 (632)
.|.++..+.++..++..... .+++. .+++. .+ ....+.+.++.+++++|+++ +++++
T Consensus 17 ~g~~~~~~~~a~~~~~~~~~--------~~~~~-----~g~~~----~~--~~~~~~~~~e~lA~~~g~~~----~~i~~ 73 (370)
T TIGR02539 17 GGVLTEAARKALVEFGDGYS--------VCDFC-----GGRLD----QI--TKPPIHDFLEDLAEFLGMDE----ARVTH 73 (370)
T ss_pred CCCCcHHHHHHHHHHhhccc--------ccccc-----ccccc----cc--cchHHHHHHHHHHHHhCCCc----eEEEC
Confidence 67888999998877543110 00000 01111 01 13466788999999999963 55689
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC-CccccCHHHHHHHHHhcCcC-CCce
Q 006746 197 NRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW-PRLRINSEKLRKMVVSKGKK-KKQR 273 (632)
Q Consensus 197 naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~-~~~~i~~~~l~~~i~~~~~~-~~~~ 273 (632)
++++++..++.++ +++||+|+++ ..|++. + ..++..|++++.++.+. +++.+|+++|++.|.+.+.. ..++
T Consensus 74 g~~~a~~~~~~~l-~~~gd~Vl~~~~~h~s~-~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 147 (370)
T TIGR02539 74 GAREGKFAVMHAL-CKEGDWVVLDGLAHYTS-Y----VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPP 147 (370)
T ss_pred ChHHHHHHHHHHh-hCCCCEEEECCcccHHH-H----HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCc
Confidence 9999999999999 6889998774 566652 2 23577899999998752 34678999999999752211 1246
Q ss_pred eEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCC
Q 006746 274 GLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 274 ~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
+++++++.+|+||...|++ |+++|+++|++++||.++..|. .+++...+++|+++.|+||++|. +.++|+++++++
T Consensus 148 ~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~--~~~~~~~~~~di~v~s~sK~~~~-~g~~G~l~~~~~ 224 (370)
T TIGR02539 148 VLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGR--MPVSAKEIGADFIVGSGHKSMAA-SGPCGVLGMSEE 224 (370)
T ss_pred EEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCC--cCCCHHHcCCCEEEeeCcccccC-CCCEEEEEECHH
Confidence 8999999999999999999 9999999999999999999885 46666667899999999999884 567999999998
Q ss_pred CccccCC
Q 006746 353 TVPILVD 359 (632)
Q Consensus 353 ~~~~L~~ 359 (632)
.++.+..
T Consensus 225 ~i~~l~~ 231 (370)
T TIGR02539 225 WEDIVLR 231 (370)
T ss_pred HHhhhcc
Confidence 8877654
No 55
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.90 E-value=1.6e-21 Score=217.59 Aligned_cols=319 Identities=13% Similarity=0.056 Sum_probs=206.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHH--HhhCCCCCCC----eEEE-eccccchhhHHHHHHHHhcCCE
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLL--AESYPFMSVK----NLLT-VYDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv--~~sl~~~~gd----~ilt-~~d~~s~~v~~~~~~a~~~G~~ 241 (632)
.+++.++++.+++++|.+.. .+.-++++++.+..+ +..+...+|+ +|++ ...|++. . ..++..|++
T Consensus 112 lel~~~~~~~la~l~G~~~~--~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~-~----~~~~~~G~~ 184 (481)
T PRK04366 112 LELMYELQEWLKEITGMDAV--TLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTN-P----ASAAMAGFK 184 (481)
T ss_pred HHHHHHHHHHHHHHhCCCce--EEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhH-H----HHHHHcCCE
Confidence 47888999999999999621 333334444444422 4434345555 7665 4566652 2 235678999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccc-cchH-HHHHHhhCCcEEEEeccccCCCCCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYL-WMRIAQENDWHILIDACALGPKDMDSF 319 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~-~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~l 319 (632)
++.++++ .++.+|.++|++++++++ +++++++. |.||.. .|++ |+++||++|++++||+||.++. +..+
T Consensus 185 vv~v~~~-~~~~~D~e~L~~~i~~~t------~~V~v~~P-n~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~-~g~~ 255 (481)
T PRK04366 185 VVEIPSN-EDGLVDLEALKAAVGEDT------AALMLTNP-NTLGLFERNILEIAEIVHEAGGLLYYDGANLNAI-LGKA 255 (481)
T ss_pred EEEeecC-CCCCcCHHHHHhhcccCC------eEEEEeCC-CCccccchHHHHHHHHHHHcCCEEEEEecChhhh-cccC
Confidence 9999997 567899999999997654 78888875 489987 5899 9999999999999999998663 1235
Q ss_pred CCCCCCCcEEEEccccccCCCC-----CceEEEEEeCCCccccCCCCCC--CceeecccccccccccccCCCCCCccccc
Q 006746 320 GLSLVRPDFLICSFYQIFGENP-----SGFGCLFVKKSTVPILVDNTSS--GMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P-----~G~G~L~Vr~~~~~~L~~~~~g--G~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
+..++++|++++++||+||. | +|+|+++++++....+.+...| |. ... +. +.-.+.-
T Consensus 256 ~~~~~GaD~~~~~~hK~l~~-P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~-~~~------l~--------~~r~~~i 319 (481)
T PRK04366 256 RPGDMGFDVVHLNLHKTFST-PHGGGGPGSGPVGVKEELAPFLPVPVVEKDGD-RYR------LD--------YDRPKSI 319 (481)
T ss_pred CccccCCCEEEEechhhcCC-CCCCCCCCeeeeeehhhhHhhCCCCeeeccCC-cee------ec--------ccccccC
Confidence 66788999999999998764 4 4678999999888777655443 11 100 00 0000000
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC---HHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG---LTMISRR 469 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G---l~~I~~r 469 (632)
.++ +.. +.+. ..+. +++.++..+| +..+.++
T Consensus 320 ~r~---~a~----------------t~~~---l~~~------------------------~a~~~l~~~G~~Gl~~~a~~ 353 (481)
T PRK04366 320 GRV---RAF----------------YGNF---GVLV------------------------RAYAYIRSLGAEGLREVSED 353 (481)
T ss_pred CCc---ccc----------------cCch---HHHH------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 011 111 1111 1111 5666666665 5577788
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHH
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~ 549 (632)
...+++||+++|.++ . .+. +.. ......++.+.-+..+| ++...|.+.+.++||.++.-.
T Consensus 354 ~~~~a~~l~~~L~~~-~-------~~~-~~~--~~~~~~~~~~~~~~~~g--~~~~~v~~~L~~~Gi~~~~~~------- 413 (481)
T PRK04366 354 AVLNANYLKARLKDI-Y-------DLP-YDR--PCMHEFVLSGKKLKETG--VRTLDIAKRLLDYGFHPPTIY------- 413 (481)
T ss_pred HHHHHHHHHHHhHhh-C-------ccc-CCC--CeeEEEEEECccccccC--CCHHHHHHHHHHCCccCCccc-------
Confidence 899999999999986 1 121 211 11122333321011122 577788887778899865210
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
+ .....+.+|+|++.++|.+|||+|++.|+++.+..
T Consensus 414 --~--------------------------p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~ 449 (481)
T PRK04366 414 --F--------------------------PLIVPEALMIEPTETESKETLDAFIAAMKQIAEEA 449 (481)
T ss_pred --c--------------------------ccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 0 01124589999999999999999999999987654
No 56
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=5.5e-22 Score=211.72 Aligned_cols=327 Identities=12% Similarity=0.026 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+++.++.+++++|++ .+++|+|+|+|+.+++.++.+++||+|++ ...|++. ...++..|++++.++++
T Consensus 18 ~~~~~~~~~la~~~~~~----~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~-----~~~~~~~g~~~~~~~~~ 88 (352)
T cd00616 18 PKVREFEKAFAEYLGVK----YAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT-----ANAILLLGATPVFVDID 88 (352)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH-----HHHHHHcCCeEEEEecC
Confidence 45678999999999973 48889999999999999997789999765 4577652 22345689999999997
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC--CCCCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG--LSLVR 325 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld--ls~~~ 325 (632)
..++.+++++++++++++ ++++++++ ++|...|++ |.++|+++|+++++|++|+.|.. ..+ +. ..
T Consensus 89 ~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~--~~~~~~~-~~ 156 (352)
T cd00616 89 PDTYNIDPELIEAAITPR------TKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGAT--YKGRKVG-TF 156 (352)
T ss_pred CCcCCcCHHHHHHhcCcC------CeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCe--ECCEEcc-cC
Confidence 446788999999988654 47887765 699999999 99999999999999999998862 111 11 12
Q ss_pred CcEEEEccc--cccCCCCCceEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccc
Q 006746 326 PDFLICSFY--QIFGENPSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 402 (632)
Q Consensus 326 ~Df~~~S~h--K~~G~~P~G~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt 402 (632)
.|+.++|+| |+++. |. .|+++.++ ++++.+++...+|.... .+ .+ +..+
T Consensus 157 ~d~~~~S~~~~K~~~~-~~-gg~~~~~~~~~~~~~~~~~~~~~~~~------~~-----------------~~---~~~~ 208 (352)
T cd00616 157 GDAGAFSFHPTKNLTT-GE-GGAVVTNDEELAERARLLRNHGRDRD------RF-----------------KY---EHEI 208 (352)
T ss_pred cceeEEcCCCCCCCcc-cC-ceEEEECCHHHHHHHHHHHHcCCCCC------CC-----------------cc---ccce
Confidence 589999987 98863 33 35566654 55554443211111100 00 00 0001
Q ss_pred cCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Q 006746 403 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 482 (632)
Q Consensus 403 ~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~ 482 (632)
..+.. .++ .+. .++......+++.+.+|.+.+.+++++.|.
T Consensus 209 ~~~~~------------~~~---~~~------------------------aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~ 249 (352)
T cd00616 209 LGYNY------------RLS---EIQ------------------------AAIGLAQLEKLDEIIARRREIAERYKELLA 249 (352)
T ss_pred eeecc------------CcC---HHH------------------------HHHHHHHHHhhHHHHHHHHHHHHHHHHHhc
Confidence 11100 001 111 233333334678889999999999999998
Q ss_pred ccCCCCCCCCCcEEEECCCCC-CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhh
Q 006746 483 KLQHPNTEGNALVKIYGPKIR-FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 561 (632)
Q Consensus 483 ~l~h~~~~G~p~v~Iygp~~~-~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~ 561 (632)
++ |.++++++... ....++++|.+.+..| +++..+.+.+.++||.+ +.+|.+........ ...
T Consensus 250 ~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~L~~~gI~~--~~~~~~~~~~~~~~----~~~ 313 (352)
T cd00616 250 DL--------PGIRLPDVPPGVKHSYHLYVIRLDPEAG--ESRDELIEALKEAGIET--RVHYPPLHHQPPYK----KLL 313 (352)
T ss_pred CC--------CCccCCCCCCCCceeeEEEEEEECCcCC--CCHHHHHHHHHHCCCCe--eeecCccccCHhhh----hcc
Confidence 87 66888876432 2356789998874212 67888888888889965 45666543322100 000
Q ss_pred hhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 562 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
.......++ ......+.||+|+|+++|.+||+++++.|+
T Consensus 314 ---~~~~~~~~~----a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 314 ---GYPPGDLPN----AEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ---CCCcCCChH----HHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 000000000 001123699999999999999999999874
No 57
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.90 E-value=6e-22 Score=219.28 Aligned_cols=327 Identities=13% Similarity=0.082 Sum_probs=217.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.+.+.++.+++++|++++ .+++|+|+|+++..+..++.+.+|++|++. .+|++ ....+..+++..|++++.++.
T Consensus 111 ~~~~~e~~~~la~l~g~~~~--~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~-~~~~~~~~~~~~G~~~~~v~~ 187 (447)
T PRK00451 111 LQAIFEYQTMICELTGMDVA--NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPE-YREVLKTYLKGQGIEVVEVPY 187 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcc--eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHH-HHHHHHHHHHhCCcEEEEecC
Confidence 46667788899999999865 699999999999999988866789997654 56665 333344556778999999998
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEE--eccccCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILI--DACALGPKDMDSFGLSLV 324 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlv--Daaq~~g~~m~~ldls~~ 324 (632)
+ ++ .++.++|+++|+++ ++++++++. |.||...|++ |.++||++|+++++ |+.. .|. .. ...++
T Consensus 188 ~-~~-~~d~~~l~~~i~~~------t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g~--~~-~~~~~ 254 (447)
T PRK00451 188 E-DG-VTDLEALEAAVDDD------TAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVS-LGL--LK-PPGEY 254 (447)
T ss_pred C-CC-CCCHHHHHHhcCCC------eEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHH-hcc--CC-CcccC
Confidence 7 45 79999999999764 489999987 8899999999 99999999999988 6553 332 11 12467
Q ss_pred CCcEEEEccccc-----cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 325 RPDFLICSFYQI-----FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 325 ~~Df~~~S~hK~-----~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
++|++++|+||| +|. | |+|+++++++.++.+.+...|.+..... ...|... +.... ....++
T Consensus 255 ~~D~~~~s~~k~~~~~~~~G-p-g~G~l~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~------~~~~~---~~~~~~ 321 (447)
T PRK00451 255 GADIVVGEGQPLGIPLSFGG-P-YLGFFATRKKLVRQMPGRLVGETVDADG--KRGFVLT------LQARE---QHIRRE 321 (447)
T ss_pred CCCEEEECCCcCCCCCCCCC-C-CchHHHhhHHHHhhCCCCEeeeecccCC--CeeeEee------ccccc---cccccc
Confidence 899999999996 553 5 8999999999888777665542211100 0000000 00000 000012
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
.++.++.... .+.++. ...+|+++.+.|++.+.+|...++++|++
T Consensus 322 ~~~~~~~~~~-------------~~~~~a----------------------aa~~l~~~~~~g~~~~~~~~~~~~~~l~~ 366 (447)
T PRK00451 322 KATSNICTNQ-------------ALNALA----------------------AAIYMSLLGPEGLRELAEQNHQKAHYLAE 366 (447)
T ss_pred cccccccccH-------------HHHHHH----------------------HHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 2332222110 112121 01356666667999999999999999999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
+|.++ +.++++.. .....+++.+ + .+...+.+.+.++||..+.-. .+ .+
T Consensus 367 ~L~~~--------~g~~~~~~----~~~~~~~v~~-~-----~~~~~~~~~L~~~gi~~~~~~--~~----~~------- 415 (447)
T PRK00451 367 RLAEI--------GGVELFDG----PFFNEFVVRL-P-----KPAEEVNEALLEKGILGGYDL--GR----YY------- 415 (447)
T ss_pred HHhhc--------CCEEecCC----CeEEEEEEec-C-----CCHHHHHHHHHhcCCCCCccc--cc----cc-------
Confidence 99987 55777521 1111222332 1 244556655566777642100 00 00
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
... .+.+|+|+++++|.+||++|++.|++++
T Consensus 416 -------------------~~~-~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 416 -------------------PEL-GNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred -------------------CCc-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 011 2589999999999999999999998764
No 58
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.88 E-value=1e-20 Score=201.59 Aligned_cols=296 Identities=15% Similarity=0.122 Sum_probs=199.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
...++++++.+++++|++ + .| ++.++|+++..+..++ +++||+|++. ..|++ + ...++..|++++.++.
T Consensus 45 ~~~~~~l~~~la~~~~~~-~--~i-v~~sg~~a~~~~~~~~-~~~gd~Vl~~~~~~~~--~---~~~~~~~g~~~~~~~~ 114 (349)
T cd06454 45 SDLHEELEEELAEFHGKE-A--AL-VFSSGYAANDGVLSTL-AGKGDLIISDSLNHAS--I---IDGIRLSGAKKRIFKH 114 (349)
T ss_pred chHHHHHHHHHHHHhCCC-C--EE-EeccHHHHHHHHHHHh-cCCCCEEEEehhhhHH--H---HHHHHHcCCceEEecC
Confidence 467789999999999985 2 34 4556678887777777 5889997764 45553 1 2335668999877642
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC------CCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD------MDSFG 320 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~------m~~ld 320 (632)
++.+++++++.+.. .+.+++++++++.+|.||...|++ |+++|+++|+++++|+++..|.- +..++
T Consensus 115 ------~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~ 187 (349)
T cd06454 115 ------NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFG 187 (349)
T ss_pred ------CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhc
Confidence 46788888887531 113468999999999999999999 99999999999999999876531 00133
Q ss_pred CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
....+.|+++.|+||++| +.| |+++.+++.++.+..... .| . ..
T Consensus 188 ~~~~~~~i~~~s~sK~~~--~~g-G~i~~~~~~~~~~~~~~~------------~~-----------------~----~~ 231 (349)
T cd06454 188 GLTDDVDIIMGTLGKAFG--AVG-GYIAGSKELIDYLRSYAR------------GF-----------------I----FS 231 (349)
T ss_pred cccccCcEEEeechhhhc--ccC-CEEECCHHHHHHHHHhch------------hh-----------------h----cc
Confidence 445688999999999999 556 777777665543322100 00 0 00
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~ 480 (632)
+ +.+.+.+.++. ++|+++.. .+.+.++.+.+.+++++.
T Consensus 232 ~----------------~~~~~~~~a~~------------------------~~l~~~~~--~~~~~~~~~~~~~~l~~~ 269 (349)
T cd06454 232 T----------------SLPPAVAAAAL------------------------AALEVLQG--GPERRERLQENVRYLRRG 269 (349)
T ss_pred C----------------CCCHHHHHHHH------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 1 11122233333 67777765 467789999999999999
Q ss_pred HHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
|.++ |. .++++. .+.++.+.+.+. .+...+.+.+.++||.++.+.+..
T Consensus 270 l~~~------g~---~~~~~~----~~~~~~~~~~~~----~~~~~~~~~L~~~gI~~~~~~~~~--------------- 317 (349)
T cd06454 270 LKEL------GF---PVGGSP----SHIIPPLIGDDP----AKAVAFSDALLERGIYVQAIRYPT--------------- 317 (349)
T ss_pred HHhc------CC---cccCCC----CCcEEEEeCCCh----HHHHHHHHHHHhCCceEEEecCCc---------------
Confidence 9887 43 344442 234445544321 345556555555699997531100
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
...+.+.||++++.++|.+||+++++.|+++
T Consensus 318 ------------------~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 318 ------------------VPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ------------------cCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 0112369999999999999999999998764
No 59
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.88 E-value=2.2e-20 Score=203.00 Aligned_cols=309 Identities=13% Similarity=0.136 Sum_probs=204.2
Q ss_pred cccccccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHH
Q 006746 156 GNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRT 234 (632)
Q Consensus 156 ~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~ 234 (632)
+++.+.+..|. .+.+.+.|+.|++++|.+ .++.++|+++|++.+..++ +++||+|++. .+|++ ....
T Consensus 71 ~~~~s~~~~G~--~~~~~~le~~ia~~~g~~----~~ii~~~~~~a~~~~~~~l-~~~gd~vi~~~~~~~s-~~~~---- 138 (393)
T TIGR01822 71 GMSSVRFICGT--QDIHKELEAKIAAFLGTE----DTILYASCFDANGGLFETL-LGAEDAIISDALNHAS-IIDG---- 138 (393)
T ss_pred CCCCcCcccCC--hHHHHHHHHHHHHHhCCC----cEEEECchHHHHHHHHHHh-CCCCCEEEEeccccHH-HHHH----
Confidence 34455544443 467789999999999984 2444578899999999998 8999997764 46664 3332
Q ss_pred HHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCC
Q 006746 235 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGP 313 (632)
Q Consensus 235 a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g 313 (632)
.+..+++...++ .++++++++.|.+....+.++++++++++.|.||...|++ |+++|+++|+++++|.+|..|
T Consensus 139 ~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g 212 (393)
T TIGR01822 139 VRLCKAKRYRYA------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATG 212 (393)
T ss_pred HHhcCCceEEeC------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence 233344443221 2688999998875321123578999999999999999999 999999999999999998765
Q ss_pred CCCC-------CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCC
Q 006746 314 KDMD-------SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 314 ~~m~-------~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
..-. .+++. .++|++++|+||++|. + ..|+++.+++.++.+.+.... +.
T Consensus 213 ~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g-~-r~G~~~~~~~~~~~l~~~~~~-----------~~---------- 268 (393)
T TIGR01822 213 FLGPTGRGSHELCGVM-GRVDIITGTLGKALGG-A-SGGFTTARKEVVELLRQRSRP-----------YL---------- 268 (393)
T ss_pred CcCCCCCchHHhcCCC-CCCeEEEEEChHHhhC-C-CcEEEEeCHHHHHHHHHhCcc-----------ce----------
Confidence 4100 12332 3689999999997773 4 459999888776655331000 00
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 466 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I 466 (632)
+ .++ .+...+.++. ++|+.++ +++.+
T Consensus 269 --------~----~~~----------------~~~~~~~a~~------------------------~al~~~~--~~~~~ 294 (393)
T TIGR01822 269 --------F----SNS----------------LPPAVVGASI------------------------KVLEMLE--ASNEL 294 (393)
T ss_pred --------e----cCC----------------CCHHHHHHHH------------------------HHHHHHh--cCHHH
Confidence 0 011 0111112222 5666654 46778
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCCh
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
.+|.+.+.+++++.|.++ |. .++++ .++++.+.+.+. .+...+.+.+.++||.++ |..+..
T Consensus 295 ~~~~~~~~~~l~~~L~~~------g~---~~~~~-----~~~~~~i~~~~~----~~~~~l~~~L~~~gI~v~-~~~~~~ 355 (393)
T TIGR01822 295 RDRLWANTRYFRERMEAA------GF---DIKPA-----DHPIIPVMLYDA----VLAQRFARRLLEEGIYVT-GFFYPV 355 (393)
T ss_pred HHHHHHHHHHHHHHHHHc------CC---CCCCC-----CCCEEEEEeCCH----HHHHHHHHHHHHCCeeEe-eeCCCC
Confidence 899999999999999876 43 23332 245666655431 233445444445699987 422110
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+...||+|+++++|.+||+++++.|++.+.
T Consensus 356 --------------------------------~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 388 (393)
T TIGR01822 356 --------------------------------VPKGQARIRVQISAAHTEEQLDRAVEAFTRIGR 388 (393)
T ss_pred --------------------------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 011234799999999999999999999998754
No 60
>PRK07179 hypothetical protein; Provisional
Probab=99.88 E-value=1.5e-20 Score=205.75 Aligned_cols=290 Identities=15% Similarity=0.147 Sum_probs=203.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
...+.++++++++|++ .++||+++++|+.+++.++ ..+|+.|++ .+.|.+ .. ..++..|+++..++
T Consensus 100 ~~~~le~~la~~~g~~----~~~~~~sG~~An~~~l~~l-~~~g~~v~~~~~~h~s-~~----~~~~~~g~~~~~~~--- 166 (407)
T PRK07179 100 PKPQFEKKLAAFTGFE----SCLLCQSGWAANVGLLQTI-ADPNTPVYIDFFAHMS-LW----EGVRAAGAQAHPFR--- 166 (407)
T ss_pred HHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHh-CCCCCEEEEECCcCHH-HH----HHHHHCCCeEEEec---
Confidence 5567778999999984 3688999999999999988 567888764 456654 22 23345677765432
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC-------CCCCCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-------MDSFGL 321 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-------m~~ldl 321 (632)
..|+++|+++|++++ +++|++.++.|+||.++|++ |.++|+++|+++++|.+|..|.. +..+++
T Consensus 167 ---~~d~~~l~~~l~~~~-----~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~ 238 (407)
T PRK07179 167 ---HNDVDHLRRQIERHG-----PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGL 238 (407)
T ss_pred ---CCCHHHHHHHHHhcC-----CeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCC
Confidence 258899999997532 48999999999999999999 99999999999999999987531 012333
Q ss_pred CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 322 SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
. .++|+++.|++|.+| + +.|+++++++.++.+......+ .+ .
T Consensus 239 ~-~~vdi~~~S~sK~~g--~-~~G~l~~~~~~~~~~~~~~~~~-----------------------------~~----~- 280 (407)
T PRK07179 239 T-SRVHFITASLAKAFA--G-RAGIITCPRELAEYVPFVSYPA-----------------------------IF----S- 280 (407)
T ss_pred C-CCCCEEEeechHhhh--c-cCeEEEeCHHHHHHHHHhCcCe-----------------------------ee----C-
Confidence 2 357999999999998 5 4899998877654332110000 00 1
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
+|...+.+.++. ++++.+.. .+...++++.+.++|++.|
T Consensus 281 ---------------~t~~~~~~aa~~------------------------aal~~~~~--~~~~~~~l~~~~~~l~~~L 319 (407)
T PRK07179 281 ---------------STLLPHEIAGLE------------------------ATLEVIES--ADDRRARLHANARFLREGL 319 (407)
T ss_pred ---------------CCCCHHHHHHHH------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 111222233333 66777654 3567789999999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 561 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~ 561 (632)
.++ |. ++++ .++++.+.+.+. .+...+.+.+.++||.++ .+|.+..
T Consensus 320 ~~~------g~---~v~~------~~~i~~l~~~~~----~~~~~~~~~L~~~GI~~~--~~~~p~~------------- 365 (407)
T PRK07179 320 SEL------GY---NIRS------ESQIIALETGSE----RNTEVLRDALEERNVFGA--VFCAPAT------------- 365 (407)
T ss_pred HHc------CC---CCCC------CCCEEEEEeCCH----HHHHHHHHHHHHCCceEe--eecCCCC-------------
Confidence 987 42 3332 357888776431 134556666777899743 3444310
Q ss_pred hhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 562 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+.||+|++.++|.|||+++++.|++.++.
T Consensus 366 ------------------~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 366 ------------------PKNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred ------------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 113469999999999999999999999998775
No 61
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.88 E-value=6.8e-21 Score=205.07 Aligned_cols=316 Identities=14% Similarity=0.153 Sum_probs=220.5
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCcc-EEEeCCHHHHHHHHHhhCCC-CCCCeEEEeccccchhhHHHHHHHHhcCC-EEEE
Q 006746 168 ESGLESAMKKRIMDFLNISENDYG-MVFTANRTSAFKLLAESYPF-MSVKNLLTVYDYESEAVEAMIRTSEKRGA-RVMS 244 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~-vvft~naT~al~lv~~sl~~-~~gd~ilt~~d~~s~~v~~~~~~a~~~G~-~v~~ 244 (632)
-.++++++++.+.++|+++ ++|. +++++++|.++..+..++ + ++|+++|.. ..++ -.|+.+++++.|+ +|..
T Consensus 37 F~~i~~e~~~~L~~l~~~~-~~~~v~~l~GsGT~a~Eaa~~nl-~~~~g~~vLv~-g~FG--~r~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLGVP-ADYLIGIVPASDTGAVEMALWSM-LGCRGVDVLAW-ESFG--KGWVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHHhCCC-CCcEEEEECCchHHHHHHHHHHc-CCCCCCeEEEE-CHHH--HHHHHHHHHhcCCCCcEE
Confidence 3689999999999999985 4565 455999999999999998 4 478887654 3554 3565589999999 5888
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCC
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSL 323 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~ 323 (632)
+..+|.. .+++++++. +. . ++++|..+.||+.+|++ +++.. ++++++||+++++|. .+++++
T Consensus 112 l~~~~g~-~~~~~~ve~----~~------~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~--~~l~~d- 174 (374)
T TIGR01365 112 LEAEYGK-LPDLKKVDF----KN------D-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFA--QDLDYH- 174 (374)
T ss_pred EcCCCCC-CCCHHHcCC----CC------C-EEEecCCCchheecccccccccc--CCCcEEEEccchhcC--CCCChh-
Confidence 8887654 478888862 11 2 67999999999999998 66433 489999999988887 588887
Q ss_pred CCCcEEEEccccccCCCCCceEEEEEeCCCccccCC--CCCCCceeecccccccccccccCCCCCCccccchhhh-hhhc
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD--NTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ-EKVA 400 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~--~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-e~e~ 400 (632)
++|++++|++|.+|. |+|+++++++++++++.+. .++. .+. ++ ++... ..+. ....
T Consensus 175 -~iDv~~tgsQK~L~~-ppGls~v~vs~~Al~~~~~~~~y~~-----~~~---~~--------~~~~~---~~~~~~~~~ 233 (374)
T TIGR01365 175 -KLDVVTFSWQKVLGG-EGAHGMLILSPRAVARLESYTPAWP-----LPK---IF--------RLTKG---GKLNKKIFE 233 (374)
T ss_pred -HCcEEEEechhccCC-CCceEEEEECHHHHHHHhhcCCCCC-----Chh---hh--------ccccc---cchhhhhhc
Confidence 499999999998887 8899999999999876542 1110 000 00 00000 0000 0000
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVN 479 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~ 479 (632)
+.. +-||++..++++. .+|+.+.+. |++++.+|.+.+++.+++
T Consensus 234 ~~t------------~~TP~v~~l~a~~------------------------~~l~~i~~egGle~~~~Rh~~~a~~l~~ 277 (374)
T TIGR01365 234 GST------------INTPSMLCVEDWL------------------------DALKWAESIGGLKPLIARADDNLAVLEA 277 (374)
T ss_pred CCC------------CCChHHHHHHHHH------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 111 1234444555554 778777776 899999999999999999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCc-EEEEEEccCCCCcc--C-----HHHHHHHHHhCCcEEccCccCChHHHhH
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGP-ALAFNVFDWKREKI--E-----PVLVQKLADRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~-ivaFnv~~~~G~~i--~-----~~~V~kla~~~gI~lr~G~~c~~~~~~~ 551 (632)
.+.++ | .+.++... +..|++ ++++.+.+..-..+ + ...+.+.+.++||.+..|..
T Consensus 278 ~l~~l------g--~l~~~~~~-~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~-------- 340 (374)
T TIGR01365 278 FVAKN------N--WIHFLAET-PEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSY-------- 340 (374)
T ss_pred HHHHC------C--CcccCCCC-hhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEecccc--------
Confidence 99998 4 24455432 234555 55566644210001 2 46777777788999976621
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
......+||+.--.-+.+||++|+++|.
T Consensus 341 ----------------------------~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 341 ----------------------------RDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred ----------------------------ccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 1112489999888889999999998874
No 62
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=1.3e-20 Score=206.71 Aligned_cols=353 Identities=10% Similarity=0.068 Sum_probs=223.9
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHH-HHHHHHHHcCCC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA-MKKRIMDFLNIS 186 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~-~R~~ia~~l~a~ 186 (632)
+.+.|+ ++-+++|+.+++++..++... |..+++.+.+..|....+.+++ +|+.+++++|++
T Consensus 26 ~~~~l~-~~~n~~~~~v~~a~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~ 87 (416)
T PRK00011 26 EHIELI-ASENFVSPAVMEAQGSVLTNK-----------------YAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAE 87 (416)
T ss_pred cCeeee-cccCcCCHHHHHHHhchhhcc-----------------cccCCCCccccccchHHHHHHHHHHHHHHHHhCCC
Confidence 344444 456668999999976643211 1114444443334334455555 799999999997
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
.. .|+++ |+|+|+.+++.++ +++||+|++ ..+|.+....+........|++++.++++..++.+|.+++++++++
T Consensus 88 ~~--~i~~~-sgt~al~~~l~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~ 163 (416)
T PRK00011 88 YA--NVQPH-SGSQANAAVYFAL-LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALE 163 (416)
T ss_pred ce--eeecC-CchHHHHHHHHHh-cCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHh
Confidence 53 46555 5688999999999 899999765 4566532112211112346788888888755678999999999975
Q ss_pred cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC---CCCCCCCCCCCcEEEEccccccCCCC
Q 006746 266 KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD---MDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 266 ~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~---m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
. +++++++++ +.+|...|++ |+++|+++|+++++|++|+.|.- ..+.++. ++|++++|+||+++. |
T Consensus 164 ~-----~~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g-~ 233 (416)
T PRK00011 164 H-----KPKLIIAGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRG-P 233 (416)
T ss_pred c-----CCCEEEECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCC-C
Confidence 2 247777753 4578888999 99999999999999999877641 0133444 689999999997643 7
Q ss_pred CceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcc
Q 006746 342 SGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLE 420 (632)
Q Consensus 342 ~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~ 420 (632)
.| |+++.+ ++.++.++.....+. .+++.
T Consensus 234 ~g-g~i~~~~~~~~~~l~~~~~~~~--------------------------------------------------~~~~~ 262 (416)
T PRK00011 234 RG-GLILTNDEELAKKINSAVFPGI--------------------------------------------------QGGPL 262 (416)
T ss_pred Cc-eEEEeCCHHHHHHHHHHhCccc--------------------------------------------------cCCcc
Confidence 65 455544 455544432110000 00111
Q ss_pred cchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECC
Q 006746 421 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGP 500 (632)
Q Consensus 421 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp 500 (632)
.+.+.++. .++..+...+++.+.++.+.+++++++.|.++ | ++++.
T Consensus 263 ~~~~aa~~------------------------~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~- 308 (416)
T PRK00011 263 MHVIAAKA------------------------VAFKEALEPEFKEYAQQVVKNAKALAEALAER------G---FRVVS- 308 (416)
T ss_pred HHHHHHHH------------------------HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC------C---Ceeee-
Confidence 11223322 34433334478888999999999999999987 4 34442
Q ss_pred CCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCC
Q 006746 501 KIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 580 (632)
Q Consensus 501 ~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 580 (632)
. ...+.++.+.+.+. + ++...+.+++.++||.++.+..-.. .. ..
T Consensus 309 ~--~~~~~~~~i~~~~~-~--~~~~~~~~~L~~~GI~v~~~~~p~~--~~----------------------------~~ 353 (416)
T PRK00011 309 G--GTDNHLVLVDLRSK-G--LTGKEAEAALEEANITVNKNAVPFD--PR----------------------------SP 353 (416)
T ss_pred c--CCCCeEEEEeCccc-C--CCHHHHHHHHHHcCcEEccCcCCCC--CC----------------------------CC
Confidence 1 12357777776432 1 4566777777888999975421000 00 01
Q ss_pred CCCcEEEEccCCC----CCHHHHHHHHHHHHHhhhh
Q 006746 581 LGITVVTASLGYL----ANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 581 ~~~~~VRvSlg~~----~t~eDV~rlv~~l~~~l~~ 612 (632)
.....+|++.... .|.+||+++++.|++++..
T Consensus 354 ~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 354 FVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 1234689876443 4699999999999998764
No 63
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.88 E-value=2.8e-20 Score=198.59 Aligned_cols=347 Identities=16% Similarity=0.134 Sum_probs=238.0
Q ss_pred EeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCc
Q 006746 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDY 190 (632)
Q Consensus 111 yLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey 190 (632)
|+=.+|=+.+|..|+++..+.+-..... .+..+.+ +| .+..-.++++++++.+.++|+++ ++|
T Consensus 6 ~nF~aGPa~lp~~Vl~~~~~~~~~~~~~------g~si~ei--------sH--Rs~~F~~i~~~~~~~Lr~Ll~~P-~~y 68 (364)
T PRK12462 6 LNFSGGPGALPDTVLEQVRQAVVELPET------GLSVLGM--------SH--RSSWFSSLLAQAEADLRDLLGIP-DEY 68 (364)
T ss_pred ceecCCCcCCCHHHHHHHHHHHhccccc------Ccccccc--------cc--ccHHHHHHHHHHHHHHHHHhCCC-CCC
Confidence 3334666688999999876433221110 1111111 01 12234789999999999999996 457
Q ss_pred cEEEeC-CHHHHHHHHHhhCCCCCCCeEE--EeccccchhhHHHHHHHHhcCCEEEEEeccCC---ccccCHHHHHHHHH
Q 006746 191 GMVFTA-NRTSAFKLLAESYPFMSVKNLL--TVYDYESEAVEAMIRTSEKRGARVMSAEFSWP---RLRINSEKLRKMVV 264 (632)
Q Consensus 191 ~vvft~-naT~al~lv~~sl~~~~gd~il--t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~---~~~i~~~~l~~~i~ 264 (632)
.|+|.+ ++|.++..+..++ +.+|++++ ....+.+ -.| .+.|++.| +|..+...++ ...+++++++ +.
T Consensus 69 ~Vlfl~GggT~~~ea~~~Nl-l~~g~~~~~~~~tG~fg--~r~-~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~ 141 (364)
T PRK12462 69 GVVFLQGGSSLQFSMIPMNF-SRPGAAAPEYVTTGYWS--RKA-IGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WD 141 (364)
T ss_pred eEEEEeccHHHHHHHHHHHc-CCCCCcEEEEEeCCHHH--HHH-HHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cC
Confidence 776665 5999999999999 67888643 5567775 345 55678887 6666543221 1223445541 11
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCce
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGF 344 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~ 344 (632)
+....|.++|..+.||+.+| +..+..+++++||+++.++. .++|+++| |++.++.+|.+| |.|+
T Consensus 142 ------~d~~~v~~t~NETstGv~~~----~~~~~~~~llvvD~sS~~~s--~pid~~~~--dvi~agsQKnlg--P~Gl 205 (364)
T PRK12462 142 ------ARAPFRHYVSNETVEGLQFP----DAAGLPDSPLIADMSSDFMS--RPFDVEAY--GMVYAHAQKNLG--PAGV 205 (364)
T ss_pred ------CCCcEEEEccCCCCceEecC----cccccCCCeEEEEcCchhhC--CCCChHHc--cEEEeeccccCC--CCce
Confidence 23578999999999999997 23333589999999988876 59999988 999999999999 8899
Q ss_pred EEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchh
Q 006746 345 GCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEI 424 (632)
Q Consensus 345 G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i 424 (632)
++++||++++++.++... .+|. +. ... +.+.. .-||++..|
T Consensus 206 tvvivs~~al~~~~~~~p-----------~~ld--------y~------~~~--~~~s~------------~nTPpv~~i 246 (364)
T PRK12462 206 TVAIIRRALLERVPDTLP-----------PMLD--------FR------THV--EHRSN------------YNTPPVFAI 246 (364)
T ss_pred EEEEECHHHHhhccccCC-----------chhh--------HH------HHH--hcCCC------------CCCchHHHH
Confidence 999999999876654211 1110 00 000 11111 125777888
Q ss_pred hHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCC
Q 006746 425 SEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL--GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI 502 (632)
Q Consensus 425 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~--Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~ 502 (632)
+.+. .+|+++.+. |++.+.+|.+.+++.|++.+.++. .+- ..+-+
T Consensus 247 y~l~------------------------~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~--------~~~-~~~~~ 293 (364)
T PRK12462 247 YVMA------------------------LVLRWIRDEIGGVHAMRDINARKAAMLYATLDALN--------EVI-DCHAH 293 (364)
T ss_pred HHHH------------------------HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCC--------Ccc-cCCCC
Confidence 9887 999999876 999999999999999999999983 121 12334
Q ss_pred CCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCC
Q 006746 503 RFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 581 (632)
Q Consensus 503 ~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 581 (632)
+..|+ -.|+|.+.|.. + -..+.+.+.++|+.--.| .+
T Consensus 294 ~~~RS~mnv~f~~~~~~---l-~~~f~~~a~~~gl~~lkG--------------------------------------hr 331 (364)
T PRK12462 294 RAARSTMNVAFRFRQPR---L-DTLFKEQSTEAGFCGLSG--------------------------------------HR 331 (364)
T ss_pred hhhcCcceEEEEcCCHH---H-HHHHHHHHHHCCCccccC--------------------------------------Cc
Confidence 45666 46788877631 2 334445666777764333 23
Q ss_pred CCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 582 GITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 582 ~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..|.+|+|+---.+.|+|++|++|+++|-.
T Consensus 332 ~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 332 SIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred ccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999854
No 64
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=7.1e-21 Score=207.17 Aligned_cols=171 Identities=15% Similarity=0.116 Sum_probs=130.6
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++......++.++++++++|++. .++| +|++.|+.++.. + +++||+|++ ...|++... .+.+.+++.|+++
T Consensus 48 y~r~~~p~~~~le~~lA~l~g~~~---~v~~-~sG~~ai~~~l~-~-l~~Gd~Vlv~~~~y~~~~~-~~~~~~~~~G~~v 120 (390)
T PRK08064 48 YSRSGNPTREALEDIIAELEGGTK---GFAF-ASGMAAISTAFL-L-LSKGDHVLISEDVYGGTYR-MITEVLSRFGIEH 120 (390)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCC---eEEE-CCHHHHHHHHHH-H-hCCCCEEEEccCccchHHH-HHHHHHHHcCCEE
Confidence 455555677899999999999862 4554 677888888775 3 688999765 456765333 3355677899999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++.+ +.++++++++++ ++++.+.+.+|+||...|++ |.++|+++|+.++||+++..+....++
T Consensus 121 ~~v~~~------d~~~l~~~l~~~------tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-- 186 (390)
T PRK08064 121 TFVDMT------NLEEVAQNIKPN------TKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-- 186 (390)
T ss_pred EEECCC------CHHHHHHhcCCC------ceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch--
Confidence 998763 578888888764 48999999999999999999 999999999999999998777522233
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEeC-CCcccc
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVKK-STVPIL 357 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~-~~~~~L 357 (632)
.+++|+++.|+||+++. |.| .|++++++ +.++.+
T Consensus 187 -~~g~Divv~S~tK~~~G-~~~~laG~~v~~~~~~~~~l 223 (390)
T PRK08064 187 -DLGADVVLHSATKFLAG-HSDVLAGLAVVKDEELAQKL 223 (390)
T ss_pred -hhCCcEEEeecceeccC-CccceeEEEEeCCHHHHHHH
Confidence 35889999999998764 666 47777764 344444
No 65
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=2.5e-20 Score=203.14 Aligned_cols=351 Identities=12% Similarity=0.062 Sum_probs=226.6
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHH-HHHHHHHHcCCCCCCccE
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA-MKKRIMDFLNISENDYGM 192 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~-~R~~ia~~l~a~~~ey~v 192 (632)
+++-+++++.+++++..++... |..+++.+.+..|....+.+++ +++.+++++|++.. .|
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~-----------------~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--~v 85 (402)
T cd00378 25 IASENFTSPAVMEAMGSDLTNK-----------------YAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--NV 85 (402)
T ss_pred eccCCcCCHHHHHHhccccccc-----------------ccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--ee
Confidence 5777788999999987654210 1125555554323333344444 78889999999743 35
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCC--ccccCHHHHHHHHHhcCcC
Q 006746 193 VFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWP--RLRINSEKLRKMVVSKGKK 269 (632)
Q Consensus 193 vft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~--~~~i~~~~l~~~i~~~~~~ 269 (632)
+++ |+|+|+.+++.++ +++||+|++ ...|++....+....++..|+++..++++.. ++.+|++++++++.+.
T Consensus 86 ~~~-sgt~a~~~~l~~l-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~--- 160 (402)
T cd00378 86 QPH-SGSQANLAVYFAL-LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF--- 160 (402)
T ss_pred ecC-CcHHHHHHHHHHh-cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC---
Confidence 545 6789999999999 789999765 4566542122211124567888888877543 6789999999998642
Q ss_pred CCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC---CCCCCCCCCCCcEEEEccccccCCCCCceE
Q 006746 270 KKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD---MDSFGLSLVRPDFLICSFYQIFGENPSGFG 345 (632)
Q Consensus 270 ~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~---m~~ldls~~~~Df~~~S~hK~~G~~P~G~G 345 (632)
+++++++++. .+|...|++ |+++|+++|+++++|++|+.|.. ..+..++ ++|++++|+||+|+. |.|.+
T Consensus 161 --~~~~v~~~~~--~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G-~~gg~ 233 (402)
T cd00378 161 --KPKLIVAGAS--AYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRG-PRGGL 233 (402)
T ss_pred --CCCEEEecCc--ccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCC-CCceE
Confidence 2478877665 457888999 99999999999999999866531 0133333 679999999997743 77654
Q ss_pred EEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhh
Q 006746 346 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 425 (632)
Q Consensus 346 ~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~ 425 (632)
+++.+++.++.+......+. .+++..+.+.
T Consensus 234 i~~~~~~~~~~l~~~~~~~~--------------------------------------------------~~~~~~~~~~ 263 (402)
T cd00378 234 ILTRKGELAKKINSAVFPGL--------------------------------------------------QGGPHLHVIA 263 (402)
T ss_pred EEeccHHHHHHHHHHhCccc--------------------------------------------------cCCchHHHHH
Confidence 44433365544432110000 0111122233
Q ss_pred HhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCC
Q 006746 426 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 505 (632)
Q Consensus 426 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~ 505 (632)
++. .++......+++...++.+.+.+++.+.|.++ | ++++.+. .
T Consensus 264 a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~---~ 307 (402)
T cd00378 264 AKA------------------------VALKEALEPEFKAYAKQVVENAKALAEALKER------G---FKVVSGG---T 307 (402)
T ss_pred HHH------------------------HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC------C---CeEeecC---C
Confidence 333 55555544356778888999999999999886 4 3444221 2
Q ss_pred CCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcE
Q 006746 506 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 585 (632)
Q Consensus 506 rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (632)
.+..+.+.+.+. + .+...+.+++.++||.++.+.+ +... . +..+...
T Consensus 308 ~~~~v~v~~~~~-~--~~~~~~~~~l~~~gI~v~~~~~--p~~~----------------------~------~~~~~~~ 354 (402)
T cd00378 308 DNHLVLVDLRPK-G--ITGKAAEDALEEAGITVNKNTL--PWDP----------------------S------SPFVPSG 354 (402)
T ss_pred CCeEEEEeCCcc-C--CCHHHHHHHHHHcCcEEcCCcC--CCCC----------------------C------CCCCCCe
Confidence 356666666532 1 3556777888889999975421 1100 0 0113468
Q ss_pred EEEccCCCC----CHHHHHHHHHHHHHhhhhcc
Q 006746 586 VTASLGYLA----NFEDVYRLWAFVAQFLDADF 614 (632)
Q Consensus 586 VRvSlg~~~----t~eDV~rlv~~l~~~l~~~f 614 (632)
+|++++.++ +.+||+.+++.|++++...-
T Consensus 355 lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 355 IRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred eEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 999999987 79999999999999776643
No 66
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=1.9e-19 Score=199.97 Aligned_cols=359 Identities=13% Similarity=0.082 Sum_probs=233.7
Q ss_pred CCCCCCCHHHHHHHhcCC-CCCCCCCCCCCCCCccccccccccccccccccccch-hHHHHHHHHHHHHHcCCCCCCccE
Q 006746 115 FGIGLFSYNQLHKQESSP-SHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE-SGLESAMKKRIMDFLNISENDYGM 192 (632)
Q Consensus 115 ag~gl~~~~~~~a~~~~~-~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~-~~~~~~~R~~ia~~l~a~~~ey~v 192 (632)
++-...|+.++++....+ +... .+.|.+++.-|... .++++-++++.+++|++.++.+.+
T Consensus 41 asen~~s~~v~~a~~s~~~~ky~------------------~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~ 102 (475)
T PLN03226 41 ASENFTSRAVMEALGSCLTNKYS------------------EGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGV 102 (475)
T ss_pred cCCccCCHHHHHHHhhHHhcccc------------------CCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEE
Confidence 777789999999976655 2221 23444444223222 455566888899999998653221
Q ss_pred EE-eCCHHHHHHHHHhhCCCCCCCeEEE-ec---cccchhhHHHHHHHHhcCC--EEEEE--eccCCccccCHHHHHHHH
Q 006746 193 VF-TANRTSAFKLLAESYPFMSVKNLLT-VY---DYESEAVEAMIRTSEKRGA--RVMSA--EFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 193 vf-t~naT~al~lv~~sl~~~~gd~ilt-~~---d~~s~~v~~~~~~a~~~G~--~v~~v--~~~~~~~~i~~~~l~~~i 263 (632)
-. ..+++.|...+..++ +++||+|+. .. .|.+ ..++..-.+-.+. .+..+ ..+..++.+|.++|++++
T Consensus 103 nv~~~SG~~AN~av~~aL-~~pgD~Il~~d~~~gGhl~--H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l 179 (475)
T PLN03226 103 NVQPLSGSPANFAVYTAL-LQPHDRIMGLDLPHGGHLS--HGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKA 179 (475)
T ss_pred ecCcCchHHHHHHHHHHh-CCCCCEEEECCCCcCcchh--hhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHH
Confidence 11 367888888899998 799999876 32 2332 1121111111112 22222 334467889999999998
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC---CCCCcEEEEcccccc-C
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS---LVRPDFLICSFYQIF-G 338 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls---~~~~Df~~~S~hK~~-G 338 (632)
... +++++++ .. ..+|...|++ +.++|+++|++++||+||.+|. ...+.. ..++|++++++||++ |
T Consensus 180 ~~~-----~pklIv~-~~-S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gl--i~~~~~~~p~~~~Div~~t~hK~L~G 250 (475)
T PLN03226 180 MLF-----RPKLIIA-GA-SAYPRDWDYARMRKIADKVGALLMCDMAHISGL--VAAQEAASPFEYCDVVTTTTHKSLRG 250 (475)
T ss_pred hhc-----CCeEEEE-ec-CcCCCccCHHHHHHHHHHcCCEEEEEchhhhCc--ccCCCCCCCCCCCeEEEecCcccccC
Confidence 753 2466655 23 3588999999 9999999999999999999986 333332 127899999999977 6
Q ss_pred CCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCC
Q 006746 339 ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGK 418 (632)
Q Consensus 339 ~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt 418 (632)
|.| |+++++++.++.+.+. .++..++. +..+. ..+ +.| .|+
T Consensus 251 --P~G-g~I~~~~~~~~~~~~g-~~~~~d~~------~~i~~------------a~~-------~~~----------~g~ 291 (475)
T PLN03226 251 --PRG-GMIFFRKGPKPPKGQG-EGAVYDYE------DKINF------------AVF-------PGL----------QGG 291 (475)
T ss_pred --CCc-eEEEEchhhcccccCC-CccHHHHH------HHhcc------------ccC-------Ccc----------CCC
Confidence 999 8889988765443321 11110000 00000 000 011 244
Q ss_pred cccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEE
Q 006746 419 LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY 498 (632)
Q Consensus 419 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iy 498 (632)
++...+.++. .||+++.+.|.+.+.+|+..++++|.+.|.++ | ++|+
T Consensus 292 p~~~~iaal~------------------------aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~------G---~~l~ 338 (475)
T PLN03226 292 PHNHTIAALA------------------------VALKQAMTPEFKAYQKQVKANAAALANRLMSK------G---YKLV 338 (475)
T ss_pred chHHHHHHHH------------------------HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC------C---CEEE
Confidence 6777788887 99999998999999999999999999999886 4 5677
Q ss_pred CCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccccc
Q 006746 499 GPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 578 (632)
Q Consensus 499 gp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 578 (632)
++.. ..+-.+|.|+..+ ++...+.+.+++.||.+-.+.. |+. .
T Consensus 339 ~~~t-~~hi~lv~~~~~g-----i~~~~~~~~L~~~~I~~nk~~~--p~~-----------------------------~ 381 (475)
T PLN03226 339 TGGT-DNHLVLWDLRPLG-----LTGSRVEKVLDLAHITLNKNAV--PGD-----------------------------S 381 (475)
T ss_pred cCCC-CCCEEEEEccCCC-----CCHHHHHHHHHHCCCEECCCCC--CCC-----------------------------c
Confidence 7642 2233344443333 7888999999999999864420 000 0
Q ss_pred CCCCCcEEEEc----cCCCCCHHHHHHHHHHHHHhhhh
Q 006746 579 ANLGITVVTAS----LGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 579 ~~~~~~~VRvS----lg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....+.||+. +..-.+++|++++.++|.+.|+.
T Consensus 382 ~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 382 SALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred ccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 12234567773 45666889999999999999984
No 67
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=2.5e-19 Score=197.07 Aligned_cols=165 Identities=14% Similarity=0.100 Sum_probs=135.2
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++.....+++.+++++++.|+. ..++|+|+|+|+++++.++ +++||+|++ ..+|.+ ....+...+++.|+++
T Consensus 58 y~R~~~p~~~~le~~lA~l~g~~----~av~~sSGt~Al~~al~~l-l~~Gd~Vi~~~~~y~~-t~~~~~~~l~~~Gi~v 131 (433)
T PRK08134 58 YSRISNPTVAVLEERVAALEGGV----GAIATASGQAALHLAIATL-MGAGSHIVASSALYGG-SHNLLHYTLRRFGIET 131 (433)
T ss_pred eecCcChHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCccHH-HHHHHHHHHhhCCeEE
Confidence 44334456789999999999985 2689999999999999998 899999765 557765 3333344457789999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
++++++ |+++++++|+++| +||++.+.+|++|.+.|++ |+++||++|++++||++|..|.. ...+
T Consensus 132 ~~vd~~------d~~~l~~~i~~~T------klV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~--~~pl 197 (433)
T PRK08134 132 TFVKPG------DIDGWRAAIRPNT------RLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL--LRPF 197 (433)
T ss_pred EEECCC------CHHHHHHhcCCCC------eEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc--CCch
Confidence 999763 6889999998754 8999999999999999999 99999999999999999998873 3344
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~ 351 (632)
.+++|++++|.||++| |.| +|.+++..
T Consensus 198 -~~GaD~vv~S~tK~l~--g~g~~~gG~v~~~ 226 (433)
T PRK08134 198 -EHGADLVYHSATKFLG--GHGTAIGGVLVDG 226 (433)
T ss_pred -hcCCCEEEeccccccC--CCCCceEEEEEec
Confidence 5799999999999998 556 77887753
No 68
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=2.4e-20 Score=202.28 Aligned_cols=168 Identities=11% Similarity=0.123 Sum_probs=130.7
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCE
Q 006746 163 LHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 163 ~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~ 241 (632)
.|+.......++.++++++++|++ .++++++++.|+.++.. + +++||+|++. ..|.+ ....+...+++.|++
T Consensus 40 ~Y~r~~~p~~~~le~~la~l~g~~----~~l~~~sG~~al~~~l~-l-l~~Gd~Vl~~~~~y~~-~~~~~~~~~~~~G~~ 112 (378)
T TIGR01329 40 DYTRSGNPTRTALESLLAKLDKAD----RAFAFSSGMAALDVITR-L-LNNGDEIIAGDDLYGG-TDRLLTQVVPRSGVV 112 (378)
T ss_pred ccCCCCChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHH-H-hCCCCEEEEcCCCchH-HHHHHHHHHHHcCcE
Confidence 344444455789999999999993 24555666779998876 4 6899997764 56654 333345667889999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG 320 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld 320 (632)
++.++.. ++++++++|+++ ++++.+.+.+|++|...|++ |+++||++|+.++||++++.|....++
T Consensus 113 v~~vd~~------d~~~le~~i~~~------tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l- 179 (378)
T TIGR01329 113 VVHVDTT------DLDKVKAALGPK------TKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL- 179 (378)
T ss_pred EEEeCCC------CHHHHHHhcCcC------ceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-
Confidence 9998763 678899888754 48999999999999999999 999999999999999999877632344
Q ss_pred CCCCCCcEEEEccccccCCCCCc--eEEEEEeCCC
Q 006746 321 LSLVRPDFLICSFYQIFGENPSG--FGCLFVKKST 353 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~ 353 (632)
.+++|++++|++|+++. |.+ .|+++++++.
T Consensus 180 --~~g~Di~v~S~tK~l~G-~~~~~~G~v~~~~~~ 211 (378)
T TIGR01329 180 --ELGADIVYHSATKFLAG-HSDVMAGVLAVKGEE 211 (378)
T ss_pred --hcCCcEEEEecceeccC-CccceeEEEEeCcHH
Confidence 35899999999996653 767 8888887654
No 69
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.84 E-value=6.7e-19 Score=193.33 Aligned_cols=342 Identities=11% Similarity=0.054 Sum_probs=228.4
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccc--hhHHHHHHHHHHHHHcCCCCCCcc
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ--ESGLESAMKKRIMDFLNISENDYG 191 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~--~~~~~~~~R~~ia~~l~a~~~ey~ 191 (632)
.++-..+|..+++++...+... |--+.|..++ ||+- ..++..-+.++++++||++-.
T Consensus 55 iasEN~~s~~v~~a~~s~l~nk-----------------yaeg~pg~ry-y~g~~~~d~ie~l~~~ra~~lf~a~~a--- 113 (493)
T PRK13580 55 IASENYSSLAVQLAMGNLLTDK-----------------YAEGTPGHRF-YAGCQNVDTVEWEAAEHAKELFGAEHA--- 113 (493)
T ss_pred ecccccCCHHHHHHhccccccc-----------------CcCCCCCccc-cCCCchHHHHHHHHHHHHHHHhCCCcc---
Confidence 3777889999999977655321 1113333333 4433 257778899999999999643
Q ss_pred EEEeCCHHHHHHHHHhhCCCCC-------------------------------CCeEEEe-c---cccchhhHHHHHHHH
Q 006746 192 MVFTANRTSAFKLLAESYPFMS-------------------------------VKNLLTV-Y---DYESEAVEAMIRTSE 236 (632)
Q Consensus 192 vvft~naT~al~lv~~sl~~~~-------------------------------gd~ilt~-~---d~~s~~v~~~~~~a~ 236 (632)
-|=.-|++.|.-.+..++ .++ ||+|+.. . +|-+.. +...+ .
T Consensus 114 nvqp~Sg~~An~~v~~al-l~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg--~~~n~-~ 189 (493)
T PRK13580 114 YVQPHSGADANLVAFWAI-LAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG--FRPNI-S 189 (493)
T ss_pred cccCCCcHHHHHHHHHHH-hcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC--cccch-h
Confidence 344457888888777776 332 6887632 2 332211 10111 1
Q ss_pred hcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC
Q 006746 237 KRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD 315 (632)
Q Consensus 237 ~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~ 315 (632)
....+++..+++..++.+|.+++++.+.+++ .+++++|.|+.++ ..|++ +.++|+++|++++||+||.+|.
T Consensus 190 ~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~------plvii~g~S~~~~-~~dl~~i~eia~~~gA~L~VD~AH~~Gl- 261 (493)
T PRK13580 190 GKMFHQRSYGVDPDTGLLDYDEIAALAREFK------PLILVAGYSAYPR-RVNFAKLREIADEVGAVLMVDMAHFAGL- 261 (493)
T ss_pred hheeeeEecccCcccCccCHHHHHHHHhhcC------CEEEEeCccccCC-CcCHHHHHHHHHHcCCEEEEECchhhce-
Confidence 1224566667776678899999999998765 7899999999955 78999 9999999999999999999986
Q ss_pred CCCCCCC------CCCCcEEEEcccccc-CCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 316 MDSFGLS------LVRPDFLICSFYQIF-GENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 316 m~~ldls------~~~~Df~~~S~hK~~-G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
...++. ..++||+++++||++ | |.| |+++++++.++.|+....
T Consensus 262 -igg~~~~~~~~~~~~~D~vtgT~hKaL~G--P~G-G~I~~~~~l~~~L~~a~P-------------------------- 311 (493)
T PRK13580 262 -VAGKVFTGDEDPVPHADIVTTTTHKTLRG--PRG-GLVLAKKEYADAVDKGCP-------------------------- 311 (493)
T ss_pred -eccccchhhcCCCCCCcEEEeCChhhccC--CCe-EEEEecHHHHHHHhhCCC--------------------------
Confidence 333331 237899999999966 7 887 999999887655521100
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
+ ..|++..|.+.++. .++..+.+.+.....+
T Consensus 312 ----------------~---------i~gg~l~p~iAA~a------------------------vAl~e~~~~ef~~y~~ 342 (493)
T PRK13580 312 ----------------L---------VLGGPLPHVMAAKA------------------------VALAEARTPEFQKYAQ 342 (493)
T ss_pred ----------------c---------ccCCCccHHHHHHH------------------------HHHHHHhCccHHHHHH
Confidence 0 01223334444443 5566554444566789
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
++...+++|.+.|.++ |.+.+ +.. ...+||.+.+.+.+ +....+++.+.+.||.+..- .+
T Consensus 343 ~l~~Na~~La~~L~~~------G~~vv---~gg---TdshIV~V~lg~~~---~~g~~a~~~L~e~GI~vn~i---~~-- 402 (493)
T PRK13580 343 QVVDNARALAEGFLKR------GARLV---TGG---TDNHLVLIDVTSFG---LTGRQAESALLDAGIVTNRN---SI-- 402 (493)
T ss_pred HHHHHHHHHHHHHHhc------CCCcc---CCC---CCCCEEEEEeCCHH---HHHHHHHHHHHHCCeEEccc---cC--
Confidence 9999999999999988 65433 221 24689888886521 33456777888889987421 00
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCC----CHHHHHHHHHHHHHhhhh
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLA----NFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~----t~eDV~rlv~~l~~~l~~ 612 (632)
+ .++. +......||+++..++ +++||++++++|.+.++.
T Consensus 403 -------------------P-tvp~-----g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 403 -------------------P-SDPN-----GAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred -------------------C-CCCC-----CCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 0 0000 1122568999999977 599999999999998864
No 70
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.84 E-value=2.5e-19 Score=207.44 Aligned_cols=327 Identities=11% Similarity=0.039 Sum_probs=220.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHH----HHHhhCCCC---CCC-eEE-EeccccchhhHHHHHHHHhcC
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFK----LLAESYPFM---SVK-NLL-TVYDYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~----lv~~sl~~~---~gd-~il-t~~d~~s~~v~~~~~~a~~~G 239 (632)
.+++.+..+.+++++|.+ .+-+-+|++.--+ ++++.|.-. +++ ++| ....|++|... +...|
T Consensus 542 lq~i~elq~~l~eLtGmd----~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas-----a~~~G 612 (954)
T PRK12566 542 RAMIDELEAWLCAITGFD----AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS-----AQMAG 612 (954)
T ss_pred HHHHHHHHHHHHHHHCCC----eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH-----HHHCC
Confidence 477888899999999997 3456665444323 333444222 222 344 45688776332 56689
Q ss_pred CEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC
Q 006746 240 ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS 318 (632)
Q Consensus 240 ~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ 318 (632)
++|+.++.+ ++|.+|.++|++++++. +.++..|++++.++..+...|++ |+++||++|++|+||++|..+. ..
T Consensus 613 ieVv~Vp~D-~~G~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~--~~ 686 (954)
T PRK12566 613 MRVVIVECD-PDGNVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ--VG 686 (954)
T ss_pred CEEEEeccC-CCCCcCHHHHHHHhhcc---CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc--cC
Confidence 999999998 78899999999999732 13567888888888888888899 9999999999999999998765 35
Q ss_pred CC-CCCCCCcEEEEccccccCCCCCceEEEEEeC-CCccccCCCCCC-CceeecccccccccccccCCCCCCccccchhh
Q 006746 319 FG-LSLVRPDFLICSFYQIFGENPSGFGCLFVKK-STVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 319 ld-ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~-~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
++ ..++++||++++.||+||. |.|.|.+|+.. ...+.|.|...+ +.++.. + . +-
T Consensus 687 l~~Pg~~GADi~~~s~HKtf~~-P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~---G------~-------------~~ 743 (954)
T PRK12566 687 LARPADIGADVSHMNLHKTFCI-PHGGGGPGMGPIGVRAHLAPFVANHPVVPVE---G------P-------------DP 743 (954)
T ss_pred CCChhhcCCCEEEecCCcccCc-CccCCCCccchhhhhhhhhhhccCCCCcCCC---C------C-------------CC
Confidence 55 3678999999999998886 99999999998 666666665433 111100 0 0 00
Q ss_pred hhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH--HHH
Q 006746 396 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG--RCL 473 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~--~~L 473 (632)
..|+.+.... -. ..+.-+++.++..+|.+.++.+. ..+
T Consensus 744 ---r~ga~S~~~~---------------gs----------------------a~~l~~A~~Yi~~lG~eLk~aa~~ailn 783 (954)
T PRK12566 744 ---NNGAVSAAPW---------------GS----------------------ASILPISWMYIAMMGPQLADASEVAILS 783 (954)
T ss_pred ---CCCceeeccc---------------ch----------------------HHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 0122111110 01 00112788899999988666666 778
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCC--CCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRF--DRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~--~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~ 551 (632)
++|+.++|.+. .+ +. |.+.+.. ....+..+.+++..| ++...|.+.+.++||...+- .
T Consensus 784 AnYla~rL~~~-------~~-v~-~~~~~~~~~hEfii~~~~l~~~~g--~~~~dvakRL~d~Gihapt~---------~ 843 (954)
T PRK12566 784 ANYLANQLGGA-------FP-VL-YRGRNERVAHECILDLRPLKAQTG--ISEEDVAKRLMDYGFHAPTM---------S 843 (954)
T ss_pred HHHHHHHhHhh-------CC-CC-cCCCCCCeeeEEEEEccccccccC--CCHHHHHHHHHHCCcEEeEE---------e
Confidence 89999999763 12 22 2332111 223333344443333 56677776555899986541 0
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh-cccccccce
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA-DFVEKARWR 621 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~-~f~~~~~~~ 621 (632)
+ ...+.+||+++.+++.+|+|+|+++|+.++++ +-|+..+|.
T Consensus 844 f----------------------------Pv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~v~~g~~~ 886 (954)
T PRK12566 844 F----------------------------PVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGKVQEGNWP 886 (954)
T ss_pred e----------------------------ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 0 12468999999999999999999999999888 567666663
No 71
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.84 E-value=8.1e-19 Score=190.29 Aligned_cols=342 Identities=13% Similarity=0.086 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...++.|+.+++++|++ +.| +++|+|+|+.+++.++.+++||+|+++ ..|++ ....++..|++++.++++
T Consensus 29 ~~~~~le~~la~~~g~~---~~v-~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~-----~~~~~~~~G~~~~~~~~~ 99 (380)
T TIGR03588 29 PTVPAFEEALAEYVGAK---YAV-AFNSATSALHIACLALGVGPGDRVWTTPITFVA-----TANCALYCGAKVDFVDID 99 (380)
T ss_pred hhHHHHHHHHHHHHCCC---eEE-EEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHH-----HHHHHHHcCCEEEEEecC
Confidence 34578999999999985 344 456899999999999988999997754 56654 134457789999999997
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC-
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP- 326 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~- 326 (632)
..++.++++++++.|++.. .++++++.++| .+|...|++ |.++|+++|+++++|++|++|. .++...++.
T Consensus 100 ~~~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~---~~~~~~~g~~ 171 (380)
T TIGR03588 100 PDTGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGA---EYGGKPVGNC 171 (380)
T ss_pred CCcCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccC---ccCCEeCCCc
Confidence 5567789999999997320 12347777654 589999999 9999999999999999999986 244444555
Q ss_pred ---cEEEEccc--cccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 327 ---DFLICSFY--QIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 327 ---Df~~~S~h--K~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
|+.++|+| |+++. |. -|+++.+ ++..+++++...+|.... .. .+. ... ..+..+ +.
T Consensus 172 ~~~d~~~~S~~~~K~~~~-~~-GG~v~~~~~~~~~~~~~~~~~g~~~~---~~-~~~-------~~~--~~~~~~---~~ 233 (380)
T TIGR03588 172 RYADATVFSFHPVKIITT-AE-GGAVTTNDEELAERMRLLRSHGITKD---PL-LFE-------KQD--EGPWYY---EQ 233 (380)
T ss_pred cccceEEEecCCCCcccc-cC-ceEEEECCHHHHHHHHHHHHCCCCCC---cc-ccc-------ccc--cCccee---ee
Confidence 99999999 77774 43 3334433 444444443211121100 00 000 000 000000 11
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~ 480 (632)
++..+ +-.+.++.+. -++..++. ++.+.++.+.+.+++.+.
T Consensus 234 ~~~g~------------n~~m~~l~aa-------------------------~g~~qL~~--l~~~~~~r~~~~~~~~~~ 274 (380)
T TIGR03588 234 QELGF------------NYRMTDIQAA-------------------------LGLSQLKK--LDRFVAKRREIAARYDRL 274 (380)
T ss_pred ecccc------------ccCccHHHHH-------------------------HHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 11100 0111222211 23334443 688899999999999999
Q ss_pred HHccCCCCCCCCCcEEEECCCCCCCCCc-EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKIRFDRGP-ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~~~~rg~-ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
|..+ |.++++.+........ ...+.+...+| ++...+.+.+.++||.++..+.+... ..+.. ..
T Consensus 275 L~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~r~~l~~~L~~~gI~~~~~~~~~~~--~~~~~---~~ 339 (380)
T TIGR03588 275 LKDL--------PYFTPLTIPLGSKSAWHLYPILLDQEFG--CTRKEVFEALRAAGIGVQVHYIPVHL--QPYYR---QG 339 (380)
T ss_pred hcCC--------CCccCCCCCCCCEeEEEEEEEEECCcCC--CCHHHHHHHHHHCCCCcccCCccccc--Chhhh---cc
Confidence 9887 5566655421111111 11122221122 57788888778899999876543211 11100 00
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
.. ...| ++ ........|++.+|...|.+||+++++.|+++|
T Consensus 340 ~~-~~~~-----p~----a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 340 FG-DGDL-----PS----AENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CC-cCCC-----cH----HHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 00 0000 00 001123589999999999999999999999875
No 72
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.84 E-value=4.3e-18 Score=201.45 Aligned_cols=323 Identities=12% Similarity=0.068 Sum_probs=214.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHH-----HHHHHHHhhCCCCCCC----eEEE-eccccchhhHHHHHHHHhc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRT-----SAFKLLAESYPFMSVK----NLLT-VYDYESEAVEAMIRTSEKR 238 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT-----~al~lv~~sl~~~~gd----~ilt-~~d~~s~~v~~~~~~a~~~ 238 (632)
.+++.+..+.+++++|.+ .+.|++|++ .++ ++++.+.+++|+ +|++ ...|.++ + ..++..
T Consensus 541 l~~i~e~q~~l~eltG~d----~~sl~~~~ga~ge~agL-~a~r~~~~~~G~~~r~~vlis~~aH~sn--p---~sa~~~ 610 (954)
T PRK05367 541 RELIDQLEAWLAEITGYD----AVSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRDVCLIPSSAHGTN--P---ASAVMA 610 (954)
T ss_pred HHHHHHHHHHHHHHHCCC----CEEECccHHHHHHHHHH-HHHHHHhhccCCCCCCEEEEEchhhhhh--H---HHHHHC
Confidence 478889999999999986 478888887 444 677777777776 3554 4567653 2 235668
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCC
Q 006746 239 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMD 317 (632)
Q Consensus 239 G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~ 317 (632)
|++|+.++.+ .++.+|.++|+++++++. .++..+++++.++..+...|++ |+++||++|++++||+|+..+. .
T Consensus 611 G~~vv~v~~d-~~G~iD~~~L~~~i~~~~---~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al--~ 684 (954)
T PRK05367 611 GMKVVVVACD-ENGNIDLDDLRAKAEEHA---DNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQ--V 684 (954)
T ss_pred CCEEEEECCC-CCCCcCHHHHHHHHhccC---CCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhc--c
Confidence 9999999997 678999999999997631 2456677777776644457999 9999999999999999997553 1
Q ss_pred CCC-CCCCCCcEEEEccccccCC----CCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 318 SFG-LSLVRPDFLICSFYQIFGE----NPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 318 ~ld-ls~~~~Df~~~S~hK~~G~----~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
.+. ..++++|++++|.||+||. .++|+|+++||+.. .+...|..+.. .....+
T Consensus 685 ~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l----~p~lpg~~v~~--~~~~~~---------------- 742 (954)
T PRK05367 685 GLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHL----APFLPGHPVQI--AGGETG---------------- 742 (954)
T ss_pred CCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccc----cccCCCCccCc--CCCCCC----------------
Confidence 222 2357899999999998653 13457799999643 34433311110 000000
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHH-
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGR- 471 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~- 471 (632)
.|+.. +..++ ....+ -.+.-++..+|.+.+.++.+
T Consensus 743 -------~g~v~-ta~~g------------~al~~------------------------~~a~~yi~~~G~~Glr~~a~~ 778 (954)
T PRK05367 743 -------IGAVS-AAPFG------------SASIL------------------------PISWMYIRMMGAEGLRQATEV 778 (954)
T ss_pred -------cCcch-hHHHH------------HHHHH------------------------HHHHHHHHHHCHHHHHHHHHH
Confidence 01111 00000 00111 15667777778666655555
Q ss_pred --HHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEE-EccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 472 --CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN-VFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 472 --~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFn-v~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
.+++|+.++|.+. ..+...+|..+..+..++.+. ++...| +....|.|.+.++||...+-.
T Consensus 779 ~~~~A~Yl~~~L~~~--------~~~~~~~~~~~~~~e~i~~~~~~~~~~g--~~~~di~krL~d~G~~~~t~~------ 842 (954)
T PRK05367 779 AILNANYIAKRLKDH--------YPVLYTGANGRVAHECILDLRPLKESTG--ITVDDIAKRLIDYGFHAPTMS------ 842 (954)
T ss_pred HHHHHHHHHHHHHhh--------cCccccCCCCCcccceEEEeecccccCC--CCHHHHHHHHHHCCCeEeecC------
Confidence 9999999999774 123334543333445666663 332223 566778877788999876410
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh-cccccccc
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA-DFVEKARW 620 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~-~f~~~~~~ 620 (632)
....+.++|++..+++.+|+|+|+++|+.+.++ .-|+...|
T Consensus 843 -------------------------------~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~~~~~~~ 884 (954)
T PRK05367 843 -------------------------------FPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDEVEAGEW 884 (954)
T ss_pred -------------------------------CccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 012468999999999999999999999998876 44555555
No 73
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.83 E-value=4.7e-19 Score=189.21 Aligned_cols=283 Identities=11% Similarity=0.099 Sum_probs=195.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCcc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRL 252 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~ 252 (632)
.+.|+.+++++|++++ +|++|+|+|+++.+++.++ .++||+|++..-.+ ......++..|++++.++.+ +++
T Consensus 57 ~~lr~~ia~~~~~~~~--~i~~~~G~~~~l~~~~~~l-~~~gd~v~~~~p~y----~~~~~~~~~~g~~~~~~~~~-~~~ 128 (346)
T TIGR01141 57 AELKQALADYYGVDPE--QILLGNGSDEIIELLIRAF-LEPGDAVLVPPPTY----SMYEISAKIHGAEVVKVPLD-EDG 128 (346)
T ss_pred HHHHHHHHHHhCcChH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCH----HHHHHHHHHcCCeEEEeccC-CCC
Confidence 5899999999998765 7999999999999999988 57899987654222 22334567789999999987 557
Q ss_pred ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEeccccC--CCCCCCCCC-CCCCC
Q 006746 253 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDACALG--PKDMDSFGL-SLVRP 326 (632)
Q Consensus 253 ~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaaq~~--g~~m~~ldl-s~~~~ 326 (632)
.++.+++++.+.++ ++++++++.+|+||..+|++ |.++++.. |+++++|.++.. +.. ..++. ...+.
T Consensus 129 ~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~-~~~~~~~~~~~ 201 (346)
T TIGR01141 129 QLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEP-STLPLLAEYPN 201 (346)
T ss_pred CCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCc-cHHHHHhhCCC
Confidence 78999999876543 48999999999999999999 88888876 999999998652 110 01111 12233
Q ss_pred cEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCC
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 406 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~ 406 (632)
++++.|++|+||.+..++|+++++++.++.+.+... .|..
T Consensus 202 ~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~------------~~~~---------------------------- 241 (346)
T TIGR01141 202 LIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRA------------PFNL---------------------------- 241 (346)
T ss_pred EEEEehhhHhhhchhhhceeeecCHHHHHHHHhccC------------CCCC----------------------------
Confidence 577899999998421237999988776655543210 0100
Q ss_pred ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccC
Q 006746 407 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQ 485 (632)
Q Consensus 407 ~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~ 485 (632)
+.+... .++..++.. .++.+.++.+.+.+.+++.|.++
T Consensus 242 -------------~~~~~~---------------------------~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 280 (346)
T TIGR01141 242 -------------SRLAQA---------------------------AAIAALRDDDFIEKTVEEINAERERLYDGLKKL- 280 (346)
T ss_pred -------------CHHHHH---------------------------HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 000000 122222222 26777888889999999999876
Q ss_pred CCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhc
Q 006746 486 HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 565 (632)
Q Consensus 486 h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~ 565 (632)
|.++++.+ .+..+.|.+.+ +.+.+.+.+.++||.++.|....
T Consensus 281 -------~g~~~~~~-----~g~~~~~~~~~------~~~~~~~~L~~~gI~v~~g~~f~-------------------- 322 (346)
T TIGR01141 281 -------PGLEVYPS-----DANFVLIRFPR------DADALFEALLEKGIIVRDLNSYP-------------------- 322 (346)
T ss_pred -------CCCEECCC-----cCCEEEEecCC------CHHHHHHHHHHCCeEEEeCCCcC--------------------
Confidence 44555432 46777777653 34556666667899998763110
Q ss_pred cccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 566 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
.. .+.+|+|++ +.+|++++++.|+
T Consensus 323 --------------~~-~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 323 --------------GL-PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred --------------CC-CCeEEEecC---CHHHHHHHHHHhC
Confidence 11 468999976 8999999998763
No 74
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.83 E-value=5e-18 Score=181.35 Aligned_cols=334 Identities=15% Similarity=0.159 Sum_probs=211.7
Q ss_pred CCceEeecCCCCC----CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIGL----FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (632)
Q Consensus 107 ~~~vyLD~ag~gl----~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~ 182 (632)
+++.|+|.++..+ .++.+++++.+.+..... +...+...+| .....++.|+.++++
T Consensus 14 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~------------------~~~~~~~~~g--~~~~~~~l~~~la~~ 73 (360)
T TIGR00858 14 DGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGA------------------GSTASRLVSG--NSPLHEELEEELAEW 73 (360)
T ss_pred CCceEEecccCCcccCCCCHHHHHHHHHHHHhcCC------------------CCCCcCcccC--CcHHHHHHHHHHHHH
Confidence 4556777777632 347788887664432100 0001111112 135677899999999
Q ss_pred cCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 183 LNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 183 l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
++.+ ..|++++++ +++..++.++ +++||+|++. ..|++ . ...++..|++++.++. ++.++|++
T Consensus 74 ~~~~---~~i~~~~G~-~~~~~~l~~~-~~~gd~v~~~~~~~~~-~----~~~~~~~g~~~~~~~~------~d~~~l~~ 137 (360)
T TIGR00858 74 KGTE---AALLFSSGY-LANVGVISAL-VGKGDLILSDALNHAS-L----IDGCRLSGARVRRYRH------NDVEHLER 137 (360)
T ss_pred hCCC---CEEEECchH-HHHHHHHHHh-CCCCCEEEEEccccHH-H----HHHHHhcCCceEEecC------CCHHHHHH
Confidence 9963 267777665 5544566666 6889997754 45543 2 2234567888877653 57889999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC-CC------CCCCCCCCCcEEEEcc
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-MD------SFGLSLVRPDFLICSF 333 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-m~------~ldls~~~~Df~~~S~ 333 (632)
.+.+.+ ..++++++++++.+.||...|++ |.++|+++|+++++|.++..+.- .. -.++...+.|+++.|+
T Consensus 138 ~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 215 (360)
T TIGR00858 138 LLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTL 215 (360)
T ss_pred HHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEec
Confidence 887532 12358999999999999999999 99999999999999999875431 00 0123334679999999
Q ss_pred ccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhh
Q 006746 334 YQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEM 413 (632)
Q Consensus 334 hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~ 413 (632)
+|+|| +.| |+++.+++.++.+..... .|. + ..++
T Consensus 216 sK~~~--~~g-G~~~~~~~~~~~~~~~~~------------~~~-----------------~---~~~~----------- 249 (360)
T TIGR00858 216 SKALG--SYG-AYVAGSQALIDYLINRAR------------TLI-----------------F---STAL----------- 249 (360)
T ss_pred hhhhh--ccC-cEEEcCHHHHHHHHHhCc------------cce-----------------e---cCCC-----------
Confidence 99999 667 888777665543321100 000 0 0000
Q ss_pred hhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCC
Q 006746 414 RQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNA 493 (632)
Q Consensus 414 ~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p 493 (632)
+...+.++. +++++... .+.+.++.+.+.++|.+.|.++ |
T Consensus 250 ------~~~~~~a~~------------------------~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~------~-- 289 (360)
T TIGR00858 250 ------PPAVAAAAL------------------------AALELIQE--EPWRREKLLALIARLRAGLEAL------G-- 289 (360)
T ss_pred ------CHHHHHHHH------------------------HHHHHHhh--CHHHHHHHHHHHHHHHHHHHHc------C--
Confidence 001112222 56665543 3667889999999999999887 3
Q ss_pred cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccc
Q 006746 494 LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDN 573 (632)
Q Consensus 494 ~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 573 (632)
++++. ..++++.+.+.+. .+...+.+.+.++||.++.+....
T Consensus 290 -~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~l~~~gI~v~~~~~~~---------------------------- 331 (360)
T TIGR00858 290 -FTLMP-----SCTPIVPVIIGDN----ASALALAEELQQQGIFVGAIRPPT---------------------------- 331 (360)
T ss_pred -CccCC-----CCCCEEEEEeCCH----HHHHHHHHHHHHCCeeEeeeCCCC----------------------------
Confidence 23332 2467777776431 234455555567899997531110
Q ss_pred cccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 574 NRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 574 ~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
...+...||+|++++++.+|++++++.|+
T Consensus 332 -----~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 332 -----VPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred -----CCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 01123589999999999999999998763
No 75
>PLN02483 serine palmitoyltransferase
Probab=99.83 E-value=5e-18 Score=189.88 Aligned_cols=303 Identities=12% Similarity=0.190 Sum_probs=197.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
....++.+++|++++|.+ + .|+|+++. .+.-.++.++ +++||+|++.. .|++ . ...++..|++++.++.
T Consensus 145 ~~~~~ele~~lA~~~g~~-~--ai~~~~G~-~an~~~i~al-~~~Gd~Vi~d~~~h~s-~----~~~~~~~Ga~v~~~~~ 214 (489)
T PLN02483 145 TKLHRELEELVARFVGKP-A--AIVFGMGY-ATNSTIIPAL-IGKGGLIISDSLNHNS-I----VNGARGSGATIRVFQH 214 (489)
T ss_pred cHHHHHHHHHHHHHhCCC-c--EEEECCHH-HHHHHHHHHh-CCCCCEEEEcchhhHH-H----HHHHHHcCCeEEEEeC
Confidence 367789999999999964 2 68887654 4444566666 78999987654 5554 2 3345778999998875
Q ss_pred cCCccccCHHHHHHHHHhc-------CcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC----
Q 006746 248 SWPRLRINSEKLRKMVVSK-------GKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD---- 315 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~-------~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~---- 315 (632)
+ +.+++++.+.+. +..+....++++.++.+.+|...+++ |+++|+++|+++++|.++..|..
T Consensus 215 ~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G 288 (489)
T PLN02483 215 N------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTG 288 (489)
T ss_pred C------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCC
Confidence 3 456666665431 10111234788888999999999999 99999999999999999876431
Q ss_pred ---CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 316 ---MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 316 ---m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
..-+++...++|+++.|++|.|| +.| |+++.+++.++.+.....+ . .+
T Consensus 289 ~g~~~~~~v~~~~~dI~~~SfSKs~g--~~G-G~i~~~~~li~~l~~~~~~-~---------~~---------------- 339 (489)
T PLN02483 289 RGVCELLGVDPADVDIMMGTFTKSFG--SCG-GYIAGSKELIQYLKRTCPA-H---------LY---------------- 339 (489)
T ss_pred CchHHhcCCCcccCcEEEEecchhcc--cCc-eEEEcCHHHHHHHHHhCcc-c---------cc----------------
Confidence 01134444568999999999999 667 8888887776655432110 0 00
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-C---HHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-G---LTMISR 468 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-G---l~~I~~ 468 (632)
.+ ..+.+.+++.. ++|+.+... | .....+
T Consensus 340 -------~~----------------~~~p~~~~~~~------------------------aaL~~l~~~~g~~~~~~~~~ 372 (489)
T PLN02483 340 -------AT----------------SMSPPAVQQVI------------------------SAIKVILGEDGTNRGAQKLA 372 (489)
T ss_pred -------cC----------------CcCHHHHHHHH------------------------HHHHHHHhCccccchHHHHH
Confidence 00 00011112222 567665421 1 123356
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
+.+...+++++.|.++ | +.++++. .++++.+-+.+.. -..+..++|+ ++||.+....++..
T Consensus 373 ~l~~~~~~l~~~L~~~------G---~~v~~~~----~sp~~~l~l~~~~---~~~~~~~~Ll-~~GI~v~~~~fp~~-- 433 (489)
T PLN02483 373 QIRENSNFFRSELQKM------G---FEVLGDN----DSPVMPIMLYNPA---KIPAFSRECL-KQNVAVVVVGFPAT-- 433 (489)
T ss_pred HHHHHHHHHHHHHHHC------C---CcccCCC----CCCEEEEEECCHH---HHHHHHHHHH-HCCcEEeeeCCCCC--
Confidence 7888899999999987 4 3456553 3567666655421 0123444444 56999874222110
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
....+.+|++++..+|.|||+++++.|+++++.-
T Consensus 434 -------------------------------p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 434 -------------------------------PLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred -------------------------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1123689999999999999999999999987653
No 76
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.83 E-value=8.1e-18 Score=181.67 Aligned_cols=336 Identities=15% Similarity=0.169 Sum_probs=211.9
Q ss_pred CCceEeecCCC---CC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI---GL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (632)
Q Consensus 107 ~~~vyLD~ag~---gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~ 182 (632)
.++-|+|.++. |+ .++.+++++.+.+..... ++..+...+| .....++.++.++++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~------------------~~~~~~~~~g--~~~~~~~l~~~la~~ 96 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGA------------------GSGGSRLVTG--NSPAHEALEEELAEW 96 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCC------------------CCCCcCcccC--CcHHHHHHHHHHHHH
Confidence 45678887765 44 457788887654432100 1111111112 135678899999999
Q ss_pred cCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 183 LNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 183 l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
++.+ + .|++ +++++++..+...+ +++||+|++.. .|++ .. ..++..|++++.++. .+.+++++
T Consensus 97 ~~~~-~--~i~~-~~g~~~~~~~l~~~-~~~gd~V~~~~~~~~~-~~----~~~~~~g~~~~~~~~------~d~~~l~~ 160 (385)
T PRK05958 97 FGAE-R--ALLF-SSGYAANLAVLTAL-AGKGDLIVSDKLNHAS-LI----DGARLSRARVRRYPH------NDVDALEA 160 (385)
T ss_pred hCCC-c--EEEE-CcHHHHHHHHHHHh-CCCCCEEEEeCccCHH-HH----HHHHhcCCceEEeCC------CCHHHHHH
Confidence 9953 2 4555 45666666666666 68999987644 4443 22 234557888887754 37789999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC------CCC-CCCCCCCCcEEEEcc
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD------MDS-FGLSLVRPDFLICSF 333 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~------m~~-ldls~~~~Df~~~S~ 333 (632)
.+++.. +.+.++++.++.+.+|...|++ |+++|+++|+++++|.+|..+.- +.. .++.....++++.|+
T Consensus 161 ~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~ 237 (385)
T PRK05958 161 LLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTL 237 (385)
T ss_pred HHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEec
Confidence 887531 1357888889999999999999 99999999999999999865420 000 133333445899999
Q ss_pred ccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhh
Q 006746 334 YQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEM 413 (632)
Q Consensus 334 hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~ 413 (632)
+|+|| +.| |+++.+++.++.+..... .+. + ..+
T Consensus 238 sK~~~--~~G-g~~~~~~~~~~~~~~~~~------------~~~-----------------~---~~~------------ 270 (385)
T PRK05958 238 GKALG--SSG-AAVLGSETLIDYLINRAR------------PFI-----------------F---TTA------------ 270 (385)
T ss_pred hhhcc--cCC-cEEEcCHHHHHHHHHhCc------------cce-----------------e---cCC------------
Confidence 99999 656 777766554433211000 000 0 000
Q ss_pred hhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCC
Q 006746 414 RQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNA 493 (632)
Q Consensus 414 ~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p 493 (632)
.+...+.++. ++|+.+... +.+.++.+.+.+++.+.|.++ |
T Consensus 271 -----~~~~~~aa~~------------------------aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~------~-- 311 (385)
T PRK05958 271 -----LPPAQAAAAR------------------------AALRILRRE--PERRERLAALIARLRAGLRAL------G-- 311 (385)
T ss_pred -----CCHHHHHHHH------------------------HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc------C--
Confidence 0011112222 567766543 677889999999999999887 4
Q ss_pred cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccc
Q 006746 494 LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDN 573 (632)
Q Consensus 494 ~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 573 (632)
++++. ..++++.|.+.+. .+...+.+.+.++||.++.+....
T Consensus 312 -~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~l~~~gI~v~~~~~~~---------------------------- 353 (385)
T PRK05958 312 -FQLMD-----SQSAIQPLIVGDN----ERALALAAALQEQGFWVGAIRPPT---------------------------- 353 (385)
T ss_pred -CCcCC-----CCCCEEEEEeCCH----HHHHHHHHHHHHCCceEecccCCC----------------------------
Confidence 23332 2577888887531 233445544456799997531000
Q ss_pred cccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 574 NRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 574 ~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
...+..+||+|++.+++.+|++++++.|++.|
T Consensus 354 -----~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 354 -----VPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred -----CCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 01123589999999999999999999998764
No 77
>PLN02721 threonine aldolase
Probab=99.82 E-value=1.6e-18 Score=185.11 Aligned_cols=300 Identities=11% Similarity=0.050 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
..+.|+.|+++++.+ .+++++++|++..++...+...+||+|++.. .|.+ .... ...++..|++++.++.+ +
T Consensus 42 ~~~l~~~la~~~~~~----~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~-~ 114 (353)
T PLN02721 42 ALRLEEEMAKIFGKE----AALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIH-LYEN-GGISTLGGVHPRTVKNN-E 114 (353)
T ss_pred HHHHHHHHHHHhCCc----eeEEecCccHHHHHHHHHHccCCCCeEEEcCcccee-hhcc-cchhhhcCceeEecCCC-c
Confidence 568999999999985 2567778888877777766434899977653 4433 1210 01456789999999876 6
Q ss_pred ccccCHHHHHHHHHhcCc-CCCceeEEEEecc-CCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCC-CCCCCCC-
Q 006746 251 RLRINSEKLRKMVVSKGK-KKKQRGLFVFPLH-SRMTGARYP---YL-WMRIAQENDWHILIDACALGPKD-MDSFGLS- 322 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~-~~~~~~Lv~~~~~-sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~-m~~ldls- 322 (632)
++.+|+++++++|++... ..++++++++... +|.+|..+| ++ |.++|+++|+++++|+++..+.. +...+..
T Consensus 115 ~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~ 194 (353)
T PLN02721 115 DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHR 194 (353)
T ss_pred CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHH
Confidence 677999999999973210 0124689999775 567899888 56 88999999999999998765420 0011111
Q ss_pred -CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 323 -LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 323 -~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
..++|++++++||++|. |.| |+++.+++.++.+..... .+ .+
T Consensus 195 ~~~~~d~~~~s~sK~l~~-~~G-~~~~~~~~~~~~~~~~~~------------~~-----------------------~~ 237 (353)
T PLN02721 195 LVKAADSVSVCLSKGLGA-PVG-SVIVGSKSFIRKAKRLRK------------TL-----------------------GG 237 (353)
T ss_pred HhhhCCEEEEecccccCC-cee-eEEecCHHHHHhHHHHHH------------hc-----------------------CC
Confidence 23789999999998884 544 345555555443221100 00 00
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
.....+ +.+. .++..++.. ++.+ ++...+.+++++.|
T Consensus 238 ~~~~~~----------------~~~~-------------------------~~~~~l~~~-~~~~-~~~~~~~~~l~~~L 274 (353)
T PLN02721 238 GMRQVG----------------VLAA-------------------------AALVALQEN-VPKL-EDDHKKAKLLAEGL 274 (353)
T ss_pred CeehhH----------------HHHH-------------------------HHHHHHHHH-HHHH-HHHHHHHHHHHHHH
Confidence 000000 0000 122112111 2222 33356788999999
Q ss_pred HccCCCCCCCCCcEEE-ECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 482 MKLQHPNTEGNALVKI-YGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~I-ygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
.++ +.+++ +.+ ..++++.|.+.+..+ .+...+.+.+.++||.++.+
T Consensus 275 ~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~L~~~gi~v~~~------------------- 321 (353)
T PLN02721 275 NQI--------KGLRVNVAA----VETNIVYFDITDGSR--ITAEKLCKSLEEHGVLLMPG------------------- 321 (353)
T ss_pred HhC--------CCcEEecCC----ccceEEEEEccCCcc--ccHHHHHHHHHhCCcEEecC-------------------
Confidence 887 33433 332 246778887764211 24455665555889998743
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||++++++++.+||+++++.|++.++.
T Consensus 322 ---------------------~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 322 ---------------------NSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred ---------------------CCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 2358999999999999999999999988763
No 78
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.82 E-value=1.2e-18 Score=184.44 Aligned_cols=294 Identities=17% Similarity=0.103 Sum_probs=198.5
Q ss_pred HHHHHHHHHHcCCC----CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 173 SAMKKRIMDFLNIS----ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 173 ~~~R~~ia~~l~a~----~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
++.++.++++++.. .....+++|+|+|+++..++.++ .++|++|++.. .|++ +...++..|++++.++.
T Consensus 39 ~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~-~~~g~~vl~~~~~~~~-----~~~~~~~~~~~~~~i~~ 112 (350)
T cd00609 39 PELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL-LNPGDEVLVPDPTYPG-----YEAAARLAGAEVVPVPL 112 (350)
T ss_pred HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh-CCCCCEEEEcCCCchh-----HHHHHHHCCCEEEEEec
Confidence 35666666666654 22337999999999999999999 57789977554 5543 23456778999999998
Q ss_pred cCCccccCH--HHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HH---HHHhhCCcEEEEeccccCCCCC--CC-
Q 006746 248 SWPRLRINS--EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WM---RIAQENDWHILIDACALGPKDM--DS- 318 (632)
Q Consensus 248 ~~~~~~i~~--~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~---~~a~~~g~~vlvDaaq~~g~~m--~~- 318 (632)
++ .+..+. +.++..+.+ +++++.+++.+|+||..+|++ +. ++|+++|+++++|+++..+..- ..
T Consensus 113 ~~-~~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~ 185 (350)
T cd00609 113 DE-EGGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPP 185 (350)
T ss_pred cc-ccCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccc
Confidence 73 333433 444444332 468999999999999999987 65 7899999999999998763210 11
Q ss_pred --CCCCCCCCcEEEEccccccCCCCCceEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhh
Q 006746 319 --FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 319 --ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
......+.|+++.|++|++|.++.++|++++++ +..+.+..... +
T Consensus 186 ~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~--------------------------------~ 233 (350)
T cd00609 186 ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLP--------------------------------Y 233 (350)
T ss_pred cccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHH--------------------------------h
Confidence 334567789999999998873345689999888 44443322100 0
Q ss_pred hhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHH
Q 006746 396 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~ 475 (632)
. .++++.+...++. .+|+... .+++++.++++.+.+
T Consensus 234 ---~----------------~~~~~~~~~~~~~------------------------~~l~~~~-~~~~~~~~~~~~~~~ 269 (350)
T cd00609 234 ---T----------------TSGPSTLSQAAAA------------------------AALDDGE-EHLEELRERYRRRRD 269 (350)
T ss_pred ---c----------------ccCCChHHHHHHH------------------------HHHhCcH-HHHHHHHHHHHHHHH
Confidence 0 0011111222222 4444433 368889999999999
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 555 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~ 555 (632)
++.+.|.++ +.. .+.. ..++..+.+.+.+. .....+.+++.++||.++.+..+..
T Consensus 270 ~l~~~L~~~------~~~--~~~~----~~~g~~~~~~~~~~----~~~~~~~~~l~~~gi~i~~~~~~~~--------- 324 (350)
T cd00609 270 ALLEALKEL------GPL--VVVK----PSGGFFLWLDLPEG----DDEEFLERLLLEAGVVVRPGSAFGE--------- 324 (350)
T ss_pred HHHHHHHhc------CCc--cccC----CCccEEEEEecCCC----ChHHHHHHHHHhCCEEEeccccccc---------
Confidence 999999987 222 2111 23455666666542 3567788899899999986532211
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
.+...||++++.. .|||+++++.|+
T Consensus 325 -------------------------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 325 -------------------------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred -------------------------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 1345999999999 999999999875
No 79
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.82 E-value=4.2e-18 Score=184.63 Aligned_cols=169 Identities=17% Similarity=0.247 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
..+.|+.|++++|++++ +|++|+|+|+|+.+++.++ ..+|++|++.. .|+ +....++..|++++.++++..
T Consensus 68 ~~~lr~~ia~~l~~~~~--~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~p~y~-----~~~~~~~~~g~~~~~v~~~~~ 139 (380)
T PRK06225 68 FPELRELILKDLGLDDD--EALITAGATESLYLVMRAF-LSPGDNAVTPDPGYL-----IIDNFASRFGAEVIEVPIYSE 139 (380)
T ss_pred hHHHHHHHHHhcCCCCC--cEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCc-----chHHHHHHhCceEEeeccccc
Confidence 35799999999999876 7999999999999999998 67899876543 443 223456778999999987422
Q ss_pred --ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEecccc---CCCCCCCCCC
Q 006746 251 --RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACAL---GPKDMDSFGL 321 (632)
Q Consensus 251 --~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~---~g~~m~~ldl 321 (632)
+..++++++++.++++ ++++++.+.+|+||..+| ++ |+++|+++|+++++|.++. .+.. ....+
T Consensus 140 ~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~ 212 (380)
T PRK06225 140 ECNYKLTPELVKENMDEN------TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHT-LAAEY 212 (380)
T ss_pred cCCccCCHHHHHhhcCCC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCC-chhhc
Confidence 3568999999888754 478888899999999987 66 7888999999999999852 1210 01111
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 358 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~ 358 (632)
. ....+++.|+.|++| +.| +|+++++++.++.+.
T Consensus 213 ~-~~~~i~~~s~SK~~g--~~G~RiG~i~~~~~l~~~~~ 248 (380)
T PRK06225 213 A-PEHTVTSYSFSKIFG--MAGLRIGAVVATPDLIEVVK 248 (380)
T ss_pred C-CCCEEEEeechhhcC--CccceeEEEecCHHHHHHHH
Confidence 1 133577889999999 557 699998877665443
No 80
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.81 E-value=7.6e-18 Score=188.71 Aligned_cols=259 Identities=15% Similarity=0.096 Sum_probs=176.7
Q ss_pred hhHHHHHHHHHHHHHcCCC-----------CCCccEEEeCCHHHHHHHH---HhhCCCC---------------------
Q 006746 168 ESGLESAMKKRIMDFLNIS-----------ENDYGMVFTANRTSAFKLL---AESYPFM--------------------- 212 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~-----------~~ey~vvft~naT~al~lv---~~sl~~~--------------------- 212 (632)
.+++..++-+.++++++.. ++...=+||+++|+|.-.. ++..-+.
T Consensus 127 ~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~ 206 (522)
T TIGR03799 127 FTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYG 206 (522)
T ss_pred hHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhcc
Confidence 4577788888888888532 2223468899999986653 2222111
Q ss_pred -CCCeEEEe-ccccchhhHHHHHHHHhcCC---EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEecc--CCCC
Q 006746 213 -SVKNLLTV-YDYESEAVEAMIRTSEKRGA---RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLH--SRMT 285 (632)
Q Consensus 213 -~gd~ilt~-~d~~s~~v~~~~~~a~~~G~---~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~--sn~T 285 (632)
++..|+++ .+|+| + ...++..|+ +++.+|++ +++++|+++|+++|.+.. ...++++++.+. ++.|
T Consensus 207 ~~~~~v~~S~~~H~S--~---~kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~--~~g~~~~~vvataGtt~t 278 (522)
T TIGR03799 207 YDGLAILVSERGHYS--L---GKAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELA--EQNIKPLAIVGVAGTTET 278 (522)
T ss_pred CCceEEEECCCchHH--H---HHHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHH--HCCCCcEEEEEEecCcCC
Confidence 12235544 46664 2 345566777 79999998 788999999999997432 123456766654 7799
Q ss_pred ccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC-----CCCC-CCcEEEEccccccCCCCCceEEEEEeCCCc-ccc
Q 006746 286 GARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG-----LSLV-RPDFLICSFYQIFGENPSGFGCLFVKKSTV-PIL 357 (632)
Q Consensus 286 G~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld-----ls~~-~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~-~~L 357 (632)
|...|++ |+++|+++|++++||||+.++. ...+ +... ++|++++++|||++. |.|+|+|++|+... +.+
T Consensus 279 GaiDpl~eIa~i~~~~g~~lHVDaA~gg~~--~~~~~~r~~l~gle~aDSit~d~HK~l~~-P~g~G~llvr~~~~~~~~ 355 (522)
T TIGR03799 279 GNIDPLDEMADIAQELGCHFHVDAAWGGAT--LLSNTYRHLLKGIERADSVTIDAHKQLYV-PMGAGMVLFKDPALMSAI 355 (522)
T ss_pred CCcCCHHHHHHHHHHcCCeEEEEchhhhHH--HhCHHHHHHhcCchhCCEEEEChhhcCCc-CcccEEEEEeCHHHHHHh
Confidence 9999999 9999999999999999998765 2222 3433 789999999996554 99999999997532 333
Q ss_pred CCC--CCC--CceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhh
Q 006746 358 VDN--TSS--GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEAD 433 (632)
Q Consensus 358 ~~~--~~g--G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~ 433 (632)
.+. |.. |.. ++. +..+ + |+.++. . ..+-
T Consensus 356 ~~~~~Yl~~~~~~------------------d~~----~~~l---e-gsR~~~----------------a-l~lw----- 387 (522)
T TIGR03799 356 EHHAEYILRKGSK------------------DLG----SHTL---E-GSRPGM----------------A-MLVY----- 387 (522)
T ss_pred ccCcchhcCCCCC------------------ccc----ccee---e-cCcchH----------------H-HHHH-----
Confidence 221 100 000 000 0011 1 222211 1 1232
Q ss_pred hhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEE
Q 006746 434 SIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN 513 (632)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFn 513 (632)
.+|+.+...|++.+.+|...|++++.+.|.+. |.++|++|. .-++|+|.
T Consensus 388 -------------------~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~--------~~~el~~~p----~l~iv~Fr 436 (522)
T TIGR03799 388 -------------------AGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ--------PDFELVTEP----ELCLLTYR 436 (522)
T ss_pred -------------------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC--------CCeEEecCC----CccEEEEE
Confidence 78888888999999999999999999999987 779999974 46799999
Q ss_pred Ecc
Q 006746 514 VFD 516 (632)
Q Consensus 514 v~~ 516 (632)
+..
T Consensus 437 ~~p 439 (522)
T TIGR03799 437 YVP 439 (522)
T ss_pred EeC
Confidence 754
No 81
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=1.3e-17 Score=183.06 Aligned_cols=344 Identities=9% Similarity=0.059 Sum_probs=210.0
Q ss_pred cCCCCCCCHHHHHHHhcCC-CCCCCCCCCCCCCCccccccccccccccccccccchhHHHHH-HHHHHHHHcCCCCCCcc
Q 006746 114 YFGIGLFSYNQLHKQESSP-SHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA-MKKRIMDFLNISENDYG 191 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~-~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~-~R~~ia~~l~a~~~ey~ 191 (632)
+++-..+++.++++....+ .... .+.+.++..-|......+++ +++++++++|++ +.
T Consensus 34 ~~sen~~~p~v~~a~~~~~~~~~~------------------~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~---~a 92 (416)
T PRK13034 34 IASENFTSPAVMEAQGSVLTNKYA------------------EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD---YA 92 (416)
T ss_pred cccccCCCHHHHHHhcchhhcCCC------------------CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC---ce
Confidence 4555567899999876542 2211 12333333223323344444 777999999985 46
Q ss_pred EEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEE--EEEeccCCccccCHHHHHHHHHhcCc
Q 006746 192 MVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARV--MSAEFSWPRLRINSEKLRKMVVSKGK 268 (632)
Q Consensus 192 vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v--~~v~~~~~~~~i~~~~l~~~i~~~~~ 268 (632)
+++++|+|.|+..++.++ .++||+|+++. .|.+....+++ . ...+..+ ..++++..++.+|++++++.+...
T Consensus 93 lv~~~SG~~A~~~~l~al-~~~GD~Vl~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-- 167 (416)
T PRK13034 93 NVQPHSGSQANGAVYLAL-LKPGDTILGMSLSHGGHLTHGAK-V-SLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH-- 167 (416)
T ss_pred EEecCCcHHHHHHHHHHh-cCCCCEEEEcCccceeeeecCCc-c-eeccceeeeEEcccccccCCcCHHHHHHHHhhc--
Confidence 678899999999999999 89999987654 45431111111 0 0012222 233343335668999999988642
Q ss_pred CCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC---CCCCCcEEEEccccccCCCCCce
Q 006746 269 KKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL---SLVRPDFLICSFYQIFGENPSGF 344 (632)
Q Consensus 269 ~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl---s~~~~Df~~~S~hK~~G~~P~G~ 344 (632)
+++++++.. ..+|...|++ |.++|+++|+++++|+||++|.- ..+. ....+|++++|+||+++. |.|
T Consensus 168 ---~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~--~~g~~~~~~~~~Di~~~s~~K~l~g-~~G- 238 (416)
T PRK13034 168 ---KPKLIIAGF--SAYPRELDFARFREIADEVGALLMVDMAHIAGLV--AAGEHPNPFPHAHVVTTTTHKTLRG-PRG- 238 (416)
T ss_pred ---CCeEEEECC--CccccccCHHHHHHHHHHcCCEEEEeCcccccCc--ccCCCCCCCCCceEEEEeCcccCCC-CCC-
Confidence 247776643 3578999999 99999999999999999988651 1121 112589999999998743 766
Q ss_pred EEEEEeCCC-ccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 345 GCLFVKKST-VPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 345 G~L~Vr~~~-~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
|+++.+++. ...++...+.|+.. .+..+.
T Consensus 239 G~v~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~ 268 (416)
T PRK13034 239 GMILTNDEEIAKKINSAVFPGLQG--------------------------------------------------GPLMHV 268 (416)
T ss_pred eEEEECcHHHHHHHHhhcCCcccC--------------------------------------------------CccHHH
Confidence 555555433 23333322111100 001111
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 503 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~ 503 (632)
+.++. .++..+.+.+.....+|+..++++|++.|.++ |.+ +..+.
T Consensus 269 ~aa~~------------------------~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~------G~~---~~~~~-- 313 (416)
T PRK13034 269 IAAKA------------------------VAFGEALQPEFKTYAKQVIANAQALAEVLKER------GYD---LVSGG-- 313 (416)
T ss_pred HHHHH------------------------HHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc------CCE---eccCC--
Confidence 22222 33333322344566799999999999999887 544 33331
Q ss_pred CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCC
Q 006746 504 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 583 (632)
Q Consensus 504 ~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 583 (632)
...+++.+.+.+.+ .....+++.+.++||.+..-. -++ +. +.....
T Consensus 314 -~~t~i~~v~~~~~~---~~~~~~~~~L~~~GI~v~~~~--~p~-----------------------~~-----~~p~~~ 359 (416)
T PRK13034 314 -TDNHLLLVDLRPKG---LSGKDAEQALERAGITVNKNT--VPG-----------------------DT-----ESPFVT 359 (416)
T ss_pred -CCCcEEEEEcCCCC---CCHHHHHHHHHhCCcEEeccC--CCC-----------------------CC-----cCCCCC
Confidence 23566555554421 577778788888899886210 000 00 011123
Q ss_pred cEEEEccCCCC----CHHHHHHHHHHHHHhhh
Q 006746 584 TVVTASLGYLA----NFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 584 ~~VRvSlg~~~----t~eDV~rlv~~l~~~l~ 611 (632)
..+|+|++.+| +++||+++++.|++.+.
T Consensus 360 ~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 360 SGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 57999999955 49999999999999876
No 82
>PRK05968 hypothetical protein; Provisional
Probab=99.80 E-value=1.4e-17 Score=181.32 Aligned_cols=171 Identities=13% Similarity=0.105 Sum_probs=129.3
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+......+++.++++++++|++. .++| +|++.|+.++..++ +++||+|++ ...|++ ....+...++..|+++
T Consensus 57 Y~r~~~p~~~~le~~lA~l~g~~~---av~~-~sG~~Ai~~al~al-~~~Gd~Vl~~~~~y~~-t~~~~~~~~~~~G~~v 130 (389)
T PRK05968 57 YSRGDNPTVRAFEEMLAKLEGAED---ARGF-ASGMAAISSTVLSF-VEPGDRIVAVRHVYPD-AFRLFETILKRMGVEV 130 (389)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCc---EEEE-CCHHHHHHHHHHHH-hCCCCEEEEeCCCchH-HHHHHHHHHHHcCceE
Confidence 444344557789999999999962 4555 67778999888877 789999765 456665 3433455677889999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++.+ +++++++++ ++ ++++.+...++.++...|++ |+++||++|+++++|+++..+....++.
T Consensus 131 ~~vd~~------d~~~l~~~i-~~------tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~~- 196 (389)
T PRK05968 131 DYVDGR------DEEAVAKAL-PG------AKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPIT- 196 (389)
T ss_pred EEeCCC------CHHHHHHhc-cc------CCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCchh-
Confidence 988642 678888877 33 48999999999999999999 9999999999999999987764212443
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
+++|+++.|++|+++. |.+ .|+++.+++.++++
T Consensus 197 --~g~Divv~S~tK~l~g-~~~~~gG~i~~~~~~~~~l 231 (389)
T PRK05968 197 --LGVDLVIHSASKYLGG-HSDTVAGVVAGSKEHIARI 231 (389)
T ss_pred --cCCcEEEeeccccccC-CCCeEEEEEEECHHHHHHH
Confidence 5789999999997774 655 57777777655444
No 83
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=2.1e-17 Score=179.41 Aligned_cols=339 Identities=12% Similarity=0.053 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+.+.++++++++|++ .+++|+|+|+|+.+++.++.+++||+|++ ...|.+. . ..+...|++++.++++
T Consensus 33 ~~~~~le~~la~~~g~~----~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~-~----~~~~~~G~~~v~vd~~ 103 (379)
T PRK11658 33 PKNQALEQAFCQLTGNQ----HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVST-L----NMIVLLGATPVMVDVD 103 (379)
T ss_pred HhHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHH-H----HHHHHcCCEEEEEecC
Confidence 44678999999999995 37889999999999999998899999775 4566642 2 2345689999999998
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
+.+..+|++++++++++++ ++++..| .+|...|++ |.++|+++|+++++|++|+.|.......+..++.|
T Consensus 104 ~~~~~~d~~~l~~~i~~~t------kav~~~~---~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~ 174 (379)
T PRK11658 104 RDTLMVTPEAIEAAITPRT------KAIIPVH---YAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTA 174 (379)
T ss_pred CCcCCcCHHHHHHhcccCC------eEEEEeC---CCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCE
Confidence 5566789999999987644 6766444 599999999 99999999999999999998763222235566777
Q ss_pred EEEEccccccCCCCCceEEEEEe--CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCC
Q 006746 328 FLICSFYQIFGENPSGFGCLFVK--KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 405 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr--~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f 405 (632)
+++++.+|.+.. |-|.+++. ++..+++++....|.... ... .+.... . +.+...+.|+
T Consensus 175 ~~Sf~~~K~l~~---g~GG~v~~~~~~~~~~~~~~~~~G~~~~--~~~-~~~~~~-----~------~~~~~~~~G~--- 234 (379)
T PRK11658 175 IFSFHAIKNITC---AEGGLVVTDDDELADRLRSLKFHGLGVD--AFD-RQTQGR-----A------PQAEVLTPGY--- 234 (379)
T ss_pred EEeCCCCCcCcc---cCceEEEECCHHHHHHHHHHHHcCCCcc--hhh-hhcccC-----C------Ccceeecccc---
Confidence 777777785542 44554554 345555554222222100 000 000000 0 0000001111
Q ss_pred CccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccC
Q 006746 406 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 485 (632)
Q Consensus 406 ~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~ 485 (632)
+.++ .++. +||.+.+..+++.+.+|.+.+.+++.+.|..+
T Consensus 235 ------------n~~~---~~l~------------------------AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~- 274 (379)
T PRK11658 235 ------------KYNL---ADIN------------------------AAIALVQLAKLEALNARRREIAARYLQALADL- 274 (379)
T ss_pred ------------ccCc---CHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 0111 2232 67777766789999999999999999999877
Q ss_pred CCCCCCCCcEEEECCCCCCCCC-cEEEEEEccC-CCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhh
Q 006746 486 HPNTEGNALVKIYGPKIRFDRG-PALAFNVFDW-KREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKT 563 (632)
Q Consensus 486 h~~~~G~p~v~Iygp~~~~~rg-~ivaFnv~~~-~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~ 563 (632)
|.+.+..|.....+. .+..+.+... .| ++...+.+.+.++||.++. +|.+-..+.+... .. .
T Consensus 275 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~L~~~gI~~~~--~~~~~~~~~~~~~---~~--~ 338 (379)
T PRK11658 275 -------PFQPLSLPAWPHQHAWHLFIIRVDEERCG--ISRDALMEALKERGIGTGL--HFRAAHTQKYYRE---RF--P 338 (379)
T ss_pred -------CCccCcCCCCCCceeEEEEEEEECCcccc--CCHHHHHHHHHHCCCCCcc--cCcCcccChhhhc---cC--C
Confidence 333343443211222 4556666421 12 5677787777788998653 3332211111000 00 0
Q ss_pred hccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 564 DREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
...- ++ .+......|.+-+|..-|.|||+++++.|++++
T Consensus 339 ~~~~----p~----~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 339 TLSL----PN----TEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CCCC----hH----HHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 0000 00 011123578888899999999999999999875
No 84
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.80 E-value=4.6e-17 Score=176.33 Aligned_cols=295 Identities=14% Similarity=0.119 Sum_probs=192.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.++.+++++++++++|.+ + .|++|+| ++++..++.++ +++||.|++.. .|++ ... .++..|+++..++
T Consensus 77 ~~l~~~l~~~l~~~~g~~-~--~i~~~sG-~~a~~~a~~~~-~~~gd~vi~~~~~~~~-~~~----~~~~~g~~~~~~~- 145 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKTE-A--ALVFQSG-FNTNQGVLSAL-LRKGDIVLSDELNHAS-IID----GLRLTKATKKIYK- 145 (385)
T ss_pred cHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHh-CCCCCEEEEEccccHH-HHH----HHHhcCCceEEeC-
Confidence 467789999999999974 2 5777766 56666777777 78999977554 4543 222 2334677775543
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC-------CCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-------MDSF 319 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-------m~~l 319 (632)
.++.+++++.|.+.. .+++++++++++.|.||...|++ +.++|+++|+++++|.++..+.- ...+
T Consensus 146 -----~~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 218 (385)
T TIGR01825 146 -----HADMDDLDRVLRENP--SYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHF 218 (385)
T ss_pred -----CCCHHHHHHHHHhhc--cCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhc
Confidence 367888888886532 23468999999999999999999 99999999999999999865421 0013
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
++. .+.|+++.|++|.+| ..| |+++.+++.++.+..... . | .
T Consensus 219 ~~~-~~~~i~~~s~sK~~~--~~g-G~~~~~~~~~~~~~~~~~-----------~-~----------------------~ 260 (385)
T TIGR01825 219 GLE-DKVDIQVGTLSKAIG--VVG-GYAAGHKELIEYLKNRAR-----------P-F----------------------L 260 (385)
T ss_pred CCC-cCCcEEEEeccHHhh--cCC-CEEecCHHHHHHHHHhCc-----------c-c----------------------c
Confidence 443 578999999999998 335 777666655544321100 0 0 0
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
.++ ..+.+...++. ++|+.+.+. ..+.++.+.+.+++.+
T Consensus 261 ~~~---------------~~~~~~~~a~~------------------------~al~~~~~~--~~~~~~~~~~~~~l~~ 299 (385)
T TIGR01825 261 FST---------------AQPPAVVAALA------------------------AAVDELQRS--PELMERLWDNTRFFKA 299 (385)
T ss_pred ccC---------------CCCHHHHHHHH------------------------HHHHHHhcC--HHHHHHHHHHHHHHHH
Confidence 000 00111122332 666655432 3466778888999999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHH-HHHHHhCCcEEccCccCChHHHhHHHHhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLV-QKLADRENISLSYGSLHHIWFSDKYQKEKDN 558 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V-~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~ 558 (632)
.|.++ |. +++.| .++++.+.+... .+...+ ++|++ +||.++.+.+..
T Consensus 300 ~L~~~------g~---~~~~~-----~~~~~~~~~~~~----~~~~~~~~~L~~-~gi~v~~~~~~~------------- 347 (385)
T TIGR01825 300 GLGKL------GY---DTGGS-----ETPITPVVIGDE----KAAQEFSRRLFD-EGIFAQSIVFPT------------- 347 (385)
T ss_pred HHHHc------CC---CCCCC-----CCCEEEEEECCH----HHHHHHHHHHHH-CCcEEcccCCCC-------------
Confidence 99887 43 33333 245666654321 123344 44555 499886442211
Q ss_pred hhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 559 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 559 ~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+...||++++++++.|||+++++.|+++++.
T Consensus 348 --------------------~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 348 --------------------VPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred --------------------CCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 0113468999999999999999999999998754
No 85
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.80 E-value=7.4e-17 Score=175.06 Aligned_cols=297 Identities=12% Similarity=0.101 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
++.+++++.+++++|++ + .|++|++ ++++..+..++ +++||+|++. ..|++ .. ..++..|+++..++.
T Consensus 87 ~l~~~l~~~la~~~g~~-~--~i~~tsG-~~a~~~~~~~l-~~~gd~vi~~~~~~~~-~~----~~~~~~~~~~~~~~~- 155 (397)
T PRK06939 87 DLHKELEEKLAKFLGTE-D--AILYSSC-FDANGGLFETL-LGKEDAIISDALNHAS-II----DGVRLCKAKRYRYAN- 155 (397)
T ss_pred HHHHHHHHHHHHHhCCC-c--EEEEcCh-HHHHHHHHHHh-CCCCCEEEEEhhhhHH-HH----HHHHhcCCceEEeCC-
Confidence 57788999999999975 2 6888877 77888888887 7899997754 45554 22 233456777766543
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCC--C-----CCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDM--D-----SFG 320 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m--~-----~ld 320 (632)
.+.+++++.+++....+.++++++..++.+.+|...|++ |.++|+++|+++++|.++..+..- . ..+
T Consensus 156 -----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~ 230 (397)
T PRK06939 156 -----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFG 230 (397)
T ss_pred -----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcC
Confidence 477888888865211122568899999999999999999 999999999999999998544210 0 112
Q ss_pred CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
+. .++|++++|++|+++. +. .|+++.+++.++.+...... + . ..
T Consensus 231 ~~-~~~~i~~~S~sK~~~g-~r-~G~v~~~~~~~~~l~~~~~~------------~-----------------~----~~ 274 (397)
T PRK06939 231 VM-DRVDIITGTLGKALGG-AS-GGYTAGRKEVIDWLRQRSRP------------Y-----------------L----FS 274 (397)
T ss_pred CC-CCCcEEEEECHHHhCc-cC-ceEEEeCHHHHHHHHHhCcc------------c-----------------c----cc
Confidence 21 2579999999998852 54 59998888776555321000 0 0 00
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~ 480 (632)
++ ++.+.+.++. ++++.+.. .+.+.++.+.+.+++++.
T Consensus 275 ~~----------------~~~~~~~a~~------------------------~al~~~~~--~~~~~~~~~~~~~~l~~~ 312 (397)
T PRK06939 275 NS----------------LAPAIVAASI------------------------KVLELLEE--SDELRDRLWENARYFREG 312 (397)
T ss_pred CC----------------CCHHHHHHHH------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 00 0011112222 56666643 357788899999999999
Q ss_pred HHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHH-HHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLV-QKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V-~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
|.++ |.+ +..+ .++++.+.+.+. .+...+ ++|++ +||.+..+.+..
T Consensus 313 L~~~------~~~---~~~~-----~~~~~~~~~~~~----~~~~~~~~~L~~-~gI~v~~~~~~~-------------- 359 (397)
T PRK06939 313 MTAA------GFT---LGPG-----EHPIIPVMLGDA----KLAQEFADRLLE-EGVYVIGFSFPV-------------- 359 (397)
T ss_pred HHHc------CCC---cCCC-----CCCEEEEEECCH----HHHHHHHHHHHH-CCceEeeeCCCC--------------
Confidence 9887 322 2222 345655544321 223344 45554 599987432210
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.+.||++++++++.+||+++++.|++++.+
T Consensus 360 -------------------~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 360 -------------------VPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred -------------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 0112358999999999999999999999998765
No 86
>PLN02271 serine hydroxymethyltransferase
Probab=99.79 E-value=8.8e-17 Score=177.40 Aligned_cols=367 Identities=14% Similarity=0.130 Sum_probs=236.3
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccch--hHHHHHHHHHHHHHcCCCCCCcc
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE--SGLESAMKKRIMDFLNISENDYG 191 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~--~~~~~~~R~~ia~~l~a~~~ey~ 191 (632)
.++-...|+.+++++-..+... |-.+.|..++ ||+-+ .++..-+.++++++||++..++.
T Consensus 154 IASEN~~S~av~~algS~ltnk-----------------YaEG~pG~Ry-y~G~~~iD~iE~la~era~~lF~~~~~~~g 215 (586)
T PLN02271 154 IASENFVCRAVMEALGSHLTNK-----------------YSEGMPGARY-YTGNQYIDQIERLCCERALAAFGLDSEKWG 215 (586)
T ss_pred ccccccCCHHHHHHhcCccccc-----------------CCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHhCCcccccc
Confidence 3677799999999976655421 1113344443 44322 46777889999999999865442
Q ss_pred -EEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHH-H---HHHHhcCCEEEEEe--ccCCccccCHHHHHHHH
Q 006746 192 -MVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAM-I---RTSEKRGARVMSAE--FSWPRLRINSEKLRKMV 263 (632)
Q Consensus 192 -vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~-~---~~a~~~G~~v~~v~--~~~~~~~i~~~~l~~~i 263 (632)
=|-.-+++.|+..+..++ ++|||+|+. ..+|........ . ..+...|..+..++ ++..++.+|.++|++.+
T Consensus 216 aNVQp~SGs~AN~aV~~AL-l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a 294 (586)
T PLN02271 216 VNVQPYSCTSANFAVYTGL-LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKA 294 (586)
T ss_pred cceeeccHHHHHHHHHHHh-cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHh
Confidence 123349999999999999 999999875 555544222210 0 12234576666666 65577899999999855
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC---CCCCcEEEEcccccc-C
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS---LVRPDFLICSFYQIF-G 338 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls---~~~~Df~~~S~hK~~-G 338 (632)
... +++|+++.+.++. ..+|++ +.++|+++|+++++|+||.+|. +..++. ...+|+++++.||++ |
T Consensus 295 ~~~-----rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGL--Ia~g~~~sP~~~aDvvt~TTHKtLrG 365 (586)
T PLN02271 295 LDF-----RPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGL--VAAKECVNPFDYCDIVTSTTHKSLRG 365 (586)
T ss_pred hhc-----CCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccc--cccCcCCCCCcCCcEEEeCCcccCCC
Confidence 332 4699999998887 779999 9999999999999999999986 444432 236899999999955 6
Q ss_pred CCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCC
Q 006746 339 ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGK 418 (632)
Q Consensus 339 ~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt 418 (632)
|.| |+++++++....+++. +.. |.... .. +.+.+..+. .-|.+ ..|.
T Consensus 366 --PrG-G~I~~r~~~~~~~~g~----~gs--------~s~~~-----~~-----~d~~~kI~~-aVfPg-------lqgG 412 (586)
T PLN02271 366 --PRG-GIIFYRKGPKLRKQGM----LLS--------HGDDN-----SH-----YDFEEKINF-AVFPS-------LQGG 412 (586)
T ss_pred --CCc-eEEEecccccccccCC----ccc--------ccccc-----cc-----HHHHHHhhc-ccCCc-------cccC
Confidence 999 8888888765433332 211 11000 00 011110000 01111 0233
Q ss_pred cccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEE
Q 006746 419 LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY 498 (632)
Q Consensus 419 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iy 498 (632)
++...|.++. .+|+.+..-....-.+++..-++.|-+.|.+. |.++|.
T Consensus 413 phn~~IAalA------------------------valkea~~~efk~Ya~QVv~NAkaLA~~L~~~------G~~vv~-- 460 (586)
T PLN02271 413 PHNNHIAALA------------------------IALKQVATPEYKAYMQQVKKNAQALASALLRR------KCRLVT-- 460 (586)
T ss_pred hhHHHHHHHH------------------------HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC------CCeEee--
Confidence 3444488887 88887765555666667777777777788776 644442
Q ss_pred CCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccccc
Q 006746 499 GPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 578 (632)
Q Consensus 499 gp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 578 (632)
|-. -...|-..+.. .| ++...+++++++.||.+---. . +. ++
T Consensus 461 ggT----dnHlvLvDl~~-~g--~~G~~ae~~Le~~~I~~Nkn~---i-------------------------P~---d~ 502 (586)
T PLN02271 461 GGT----DNHLLLWDLTT-LG--LTGKNYEKVCEMCHITLNKTA---I-------------------------FG---DN 502 (586)
T ss_pred CCC----CcceeeecCcc-cC--CCHHHHHHHHHHcCeEecccc---C-------------------------CC---CC
Confidence 221 23455444433 22 788999999999999873110 0 00 00
Q ss_pred CCCCCcEEEEccCCCCC----HHHHHHHHHHHHHhhh
Q 006746 579 ANLGITVVTASLGYLAN----FEDVYRLWAFVAQFLD 611 (632)
Q Consensus 579 ~~~~~~~VRvSlg~~~t----~eDV~rlv~~l~~~l~ 611 (632)
.....+.||+....+|+ ++|+..+.++|.+.++
T Consensus 503 ~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 503 GTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 22345789999877774 6899999999988877
No 87
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=6.5e-17 Score=173.73 Aligned_cols=166 Identities=12% Similarity=0.189 Sum_probs=125.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEE-eCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVF-TANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvf-t~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.+++++|++++ .|++ |+++++++.+++..+ .++||+|++..-+.. .....++..|++++.++.+ ++
T Consensus 72 ~~lr~~ia~~~~~~~~--~i~~~~~Ga~~~i~~~~~~~-~~~gd~vlv~~p~y~----~~~~~~~~~g~~~~~~~~~-~~ 143 (361)
T PRK00950 72 PELREALSKYTGVPVE--NIIVGGDGMDEVIDTLMRTF-IDPGDEVIIPTPTFS----YYEISAKAHGAKPVYAKRE-ED 143 (361)
T ss_pred HHHHHHHHHHhCCCHH--HEEEeCCCHHHHHHHHHHHh-cCCCCEEEEcCCChH----HHHHHHHHcCCEEEEeecC-CC
Confidence 5899999999999875 6778 788999999999888 688999876543222 2234467789999999865 45
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC--CCCCCCCCCCCCCCcE
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG--PKDMDSFGLSLVRPDF 328 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~--g~~m~~ldls~~~~Df 328 (632)
+.++++++++.++++ ++++++++.+|+||..+|++ +.++|+++|+++++|.++.. +..+.++ +...+.-+
T Consensus 144 ~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~-~~~~~~vi 216 (361)
T PRK00950 144 FSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPL-ALEYDNLI 216 (361)
T ss_pred CCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHH-HHhcCCEE
Confidence 578999999988653 47889999999999999999 99999999999999998753 2111122 11222347
Q ss_pred EEEccccccCCCCCc--eEEEEEeCCCcc
Q 006746 329 LICSFYQIFGENPSG--FGCLFVKKSTVP 355 (632)
Q Consensus 329 ~~~S~hK~~G~~P~G--~G~L~Vr~~~~~ 355 (632)
++.|+.|.||. .| +|+++..++.++
T Consensus 217 ~~~S~SK~~g~--~GlRiG~~~~~~~~~~ 243 (361)
T PRK00950 217 IGRTFSKVFGL--AGLRIGYGFVPEWLID 243 (361)
T ss_pred EEEeehHhhcC--chhhcchhcCCHHHHH
Confidence 77899999994 36 677776655543
No 88
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.79 E-value=7.6e-17 Score=176.16 Aligned_cols=297 Identities=12% Similarity=0.085 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
....+.++++++++|.+ ..++++++++|+..+...+. +.+++.|++..-+|...... ++..|+++..++.
T Consensus 90 ~~~~~Le~~la~~~g~~----~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~- 160 (402)
T TIGR01821 90 IPHVELEAELADLHGKE----SALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG----IRHSGAEKFIFRH- 160 (402)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH----HHHcCCeEEEECC-
Confidence 45678999999999963 24556677888777777653 33566666553233322222 3457887765543
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC--------C
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS--------F 319 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~--------l 319 (632)
.|.++++++++... .++++++++.++.|++|...|++ |.++|+++|++++||.+|..|.- .+ .
T Consensus 161 -----~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-g~~g~g~~~~~ 232 (402)
T TIGR01821 161 -----NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-GPRGGGIAERD 232 (402)
T ss_pred -----CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-CCCCCccchhc
Confidence 26678888776321 12468999999999999999999 99999999999999999985420 11 1
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
++. .++|+++.++-|.||. + | |++..+++.++.+.....+ |
T Consensus 233 ~~~-~~~div~~t~sKa~g~-~-G-G~i~~~~~~~~~l~~~~~~------------~----------------------- 273 (402)
T TIGR01821 233 GLM-HRIDIIEGTLAKAFGV-V-G-GYIAASRKLIDAIRSYAPG------------F----------------------- 273 (402)
T ss_pred cCC-CCCeEEEEechhhhcc-C-C-ceeecCHHHHHHHHHhCcC------------c-----------------------
Confidence 111 2579999999999994 3 4 6666565554433211000 0
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
.|+ ++.+.....+.. ++|+.+.+. +.+.++.+.+.+++.+
T Consensus 274 ----~~t----------~~~~~~~~aaa~------------------------aaL~~~~~~--~~~~~~~~~~~~~l~~ 313 (402)
T TIGR01821 274 ----IFT----------TSLPPAIAAGAT------------------------ASIRHLKES--QDLRRAHQENVKRLKN 313 (402)
T ss_pred ----eec----------CcCCHHHHHHHH------------------------HHHHHhhcC--HHHHHHHHHHHHHHHH
Confidence 000 000001112222 677777654 6667778899999999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
.|.++ |.+ ++++ .++++.+.+.+. ....+..++|++++||.++......
T Consensus 314 ~L~~~------g~~---~~~~-----~~~i~~i~~~~~---~~a~~~~~~L~~~~Gi~v~~~~~p~-------------- 362 (402)
T TIGR01821 314 LLEAL------GIP---VIPN-----PSHIVPVIIGDA---ALCKKVSDLLLNKHGIYVQPINYPT-------------- 362 (402)
T ss_pred HHHHc------CCC---cCCC-----CCCEEEEEeCCH---HHHHHHHHHHHhcCCEEEEeECCCC--------------
Confidence 99887 433 2222 467887765431 0112344455667899987531100
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+...||+|++.++|.+||+++++.|++.+++
T Consensus 363 -------------------~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 363 -------------------VPRGTERLRITPTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred -------------------CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 0113358999999999999999999999998764
No 89
>PRK09105 putative aminotransferase; Provisional
Probab=99.79 E-value=4.3e-17 Score=176.38 Aligned_cols=205 Identities=14% Similarity=0.138 Sum_probs=145.9
Q ss_pred CCceEeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
++.++||.+...+ .|+.+++++....... .+ |+- .. ..+.|+.|++++|+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~------------------------~~--Y~~--~~-~~~Lr~aia~~~~v 93 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALS------------------------GR--YDL--EL-EDDLRTLFAAQEGL 93 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHh------------------------cC--CCC--ch-HHHHHHHHHHHhCc
Confidence 5678999988764 5777888765432110 00 211 11 46899999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
+++ +|++|+|+++++.+++..+ .++||+|++. ..|+. ....++..|++++.++.+ +++.++.+++++. .
T Consensus 94 ~~e--~I~it~Gs~~ai~~~~~~l-~~~gd~Vli~~P~y~~-----~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~-~ 163 (370)
T PRK09105 94 PAD--HVMAYAGSSEPLNYAVLAF-TSPTAGLVTADPTYEA-----GWRAADAQGAPVAKVPLR-ADGAHDVKAMLAA-D 163 (370)
T ss_pred Chh--hEEEcCChHHHHHHHHHHH-cCCCCEEEEeCCChHH-----HHHHHHHcCCeEEEecCC-CCCCCCHHHHHhc-C
Confidence 876 7999999999999999998 6789997654 34442 244577899999999986 4566888888765 2
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEecccc-CCCCCCCCCCCCCCCc-EEEEccccccCC
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACAL-GPKDMDSFGLSLVRPD-FLICSFYQIFGE 339 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~-~g~~m~~ldls~~~~D-f~~~S~hK~~G~ 339 (632)
+ ++++++++..+|+||..+|.+ |.++++. +|+++++|.+.. .......+++.....+ +++.|+-|.||.
T Consensus 164 ~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~ 237 (370)
T PRK09105 164 P------NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGM 237 (370)
T ss_pred C------CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcC
Confidence 2 248999999999999999999 8776643 489999999752 1111012333334456 445588899994
Q ss_pred CCCc--eEEEEEeCCCccccC
Q 006746 340 NPSG--FGCLFVKKSTVPILV 358 (632)
Q Consensus 340 ~P~G--~G~L~Vr~~~~~~L~ 358 (632)
.| +|+++..++.++.+.
T Consensus 238 --~GlRiG~~v~~~~~i~~l~ 256 (370)
T PRK09105 238 --AGMRLGLAAARPDLLAKLA 256 (370)
T ss_pred --CccceeeeecCHHHHHHHH
Confidence 47 899998777665554
No 90
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.78 E-value=5.1e-18 Score=180.18 Aligned_cols=176 Identities=11% Similarity=0.055 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+++++.+++++| + + .+++|+|+|+|+.+++.++ +.+||+|++. ..|.+. ... ...++..|++++.++.+
T Consensus 32 ~~~~~l~~~~a~~~g-~-~--~~~~~~~gt~a~~~~~~~l-~~~gd~v~~~~~~~~~~-~~~-~~~~~~~g~~~~~v~~~ 104 (338)
T cd06502 32 PTTAKLEARAAELFG-K-E--AALFVPSGTAANQLALAAH-TQPGGSVICHETAHIYT-DEA-GAPEFLSGVKLLPVPGE 104 (338)
T ss_pred HHHHHHHHHHHHHhC-C-C--eEEEecCchHHHHHHHHHh-cCCCCeEEEecCcceee-ecC-CcHHHHcCceEEeecCC
Confidence 456789999999999 3 3 5889999999999999998 7899997754 455431 111 11234479999999875
Q ss_pred CCccccCHHHHHHHHHhcCcC-CCceeEEEEeccCCCCccc---cchH-HHHHHhhCCcEEEEeccccCC----CCCCCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKK-KKQRGLFVFPLHSRMTGAR---YPYL-WMRIAQENDWHILIDACALGP----KDMDSF 319 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~-~~~~~Lv~~~~~sn~TG~~---~pl~-i~~~a~~~g~~vlvDaaq~~g----~~m~~l 319 (632)
.+.++.++|++++.+..+. ..+++++++++.+|. |.. .+++ |+++|+++|+++++|+++..+ .. .++
T Consensus 105 --~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~-~~~ 180 (338)
T cd06502 105 --NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALG-VAL 180 (338)
T ss_pred --CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcC-CCH
Confidence 3568999999999752110 124689999999986 644 3456 788999999999999875321 10 022
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
+.-..++|+++.|+||+||. | |.++++.+++.++.++
T Consensus 181 ~~~~~~~d~~~~s~sK~~~~-~-~g~~~~~~~~~~~~~~ 217 (338)
T cd06502 181 KTYKSGVDSVSFCLSKGGGA-P-VGAVVVGNRDFIARAR 217 (338)
T ss_pred HHHHhcCCEEEEeccccCCC-c-cceEEECCHHHHHHHH
Confidence 21124789999999999996 5 4345556666655443
No 91
>PLN02880 tyrosine decarboxylase
Probab=99.78 E-value=3.4e-17 Score=182.87 Aligned_cols=365 Identities=13% Similarity=0.102 Sum_probs=226.5
Q ss_pred ceEeecCCCCCCCHHHHHHHhc-CCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQES-SPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE 187 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~-~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~ 187 (632)
.-|+.|--++..+.+++-.+.. .++.... .|. ..| ....++.++-+.+++++|.++
T Consensus 83 P~f~~~~~~~~~~~~~lad~l~~~~n~~~~-----~~~----------~sp--------~~~~lE~~vi~wl~~l~g~p~ 139 (490)
T PLN02880 83 PNYFAYYPSNSSVAGFLGEMLSAGLNIVGF-----SWI----------TSP--------AATELEMIVLDWLAKLLNLPE 139 (490)
T ss_pred CCeeEeccCCCcHHHHHHHHHHHhhccCCc-----ccc----------cCc--------ccHHHHHHHHHHHHHHhCCCc
Confidence 5588888888877777776432 1111100 011 122 235788899999999999985
Q ss_pred CC-----ccEEEeCCHHHHHHHHH---hhC-----CCCCCCe-EE-EeccccchhhHHHHHHHHhcCCE---EEEEeccC
Q 006746 188 ND-----YGMVFTANRTSAFKLLA---ESY-----PFMSVKN-LL-TVYDYESEAVEAMIRTSEKRGAR---VMSAEFSW 249 (632)
Q Consensus 188 ~e-----y~vvft~naT~al~lv~---~sl-----~~~~gd~-il-t~~d~~s~~v~~~~~~a~~~G~~---v~~v~~~~ 249 (632)
+- -.-+||+++|+|.-+.+ +.. .+....+ ++ ++.+-|+ .+...+.-.|+. |+.||.+.
T Consensus 140 ~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~----Sv~Kaa~~lGlg~~~v~~Vp~d~ 215 (490)
T PLN02880 140 QFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS----ALQKACQIAGIHPENCRLLKTDS 215 (490)
T ss_pred hhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH----HHHHHHHHcCCCHHHEEEeecCC
Confidence 31 13678999999864432 211 1111123 33 3333343 234456667874 78899873
Q ss_pred -CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCC-CC--CCCC-
Q 006746 250 -PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMD-SF--GLSL- 323 (632)
Q Consensus 250 -~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~-~l--dls~- 323 (632)
.++++++++|+++|.+.++....+-+|+-+.-+..||..-|++ |+++|+++|++++||||..++.-.. .. .+..
T Consensus 216 ~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gi 295 (490)
T PLN02880 216 STNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGV 295 (490)
T ss_pred CcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCc
Confidence 4678999999999986543334567889999999999999999 9999999999999999877653101 00 2333
Q ss_pred CCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcccc
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 403 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~ 403 (632)
.++|++++++|||++. |.|+|+|++|+... ...+.... ..|....... ..++.
T Consensus 296 e~aDSit~d~HKwl~~-P~~~g~llvr~~~~-l~~~~~~~---------~~Yl~~~~~~----------------~~~~~ 348 (490)
T PLN02880 296 EEADSFNMNAHKWFLT-NFDCSLLWVKDRNA-LIQSLSTN---------PEFLKNKASQ----------------ANSVV 348 (490)
T ss_pred hhcCEEEECchhhcCC-CccEEEEEEeCHHH-HHHHHccC---------HHHhcCcccc----------------ccCCC
Confidence 4789999999998887 99999999996321 11211111 0010000000 00111
Q ss_pred CCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHH---HHhhCHHHHHHHHH---HHHHHH
Q 006746 404 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ---VDSLGLTMISRRGR---CLINWL 477 (632)
Q Consensus 404 ~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~---~~~~Gl~~I~~r~~---~L~~~L 477 (632)
++... .+ .+. ++ .++|++ ++.+|.+.+.++++ .|++++
T Consensus 349 ~~~~~-~i--------------~~~----------------rr-----~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~ 392 (490)
T PLN02880 349 DYKDW-QI--------------PLG----------------RR-----FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEF 392 (490)
T ss_pred Chhcc-Cc--------------CCC----------------Cc-----ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 11100 00 000 00 145665 45579999999998 999999
Q ss_pred HHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC-----ccCHHHHHHHHHhCCcEEccCccCChHHHhHH
Q 006746 478 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE-----KIEPVLVQKLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 478 ~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~-----~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
.+.|.+. |.++++.|. ..++|+|.+.+.... .+...+.+++.+...|.+...
T Consensus 393 ~~~l~~~--------~~~el~~~~----~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t----------- 449 (490)
T PLN02880 393 EQLVAQD--------SRFEVVTPR----IFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHT----------- 449 (490)
T ss_pred HHHHhcC--------CCEEEecCC----ceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEE-----------
Confidence 9999876 678999874 377999998752110 011233344444444444321
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCC-HHHHHHHHHHHHHhhhh
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLAN-FEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t-~eDV~rlv~~l~~~l~~ 612 (632)
...+..++|+|++.++| .+||+++++.|.+..+.
T Consensus 450 --------------------------~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 450 --------------------------VLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred --------------------------EECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 01134599999866665 59999999999887654
No 92
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.77 E-value=1.7e-16 Score=173.55 Aligned_cols=297 Identities=11% Similarity=0.060 Sum_probs=188.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY-PFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+...+.++++++++|.+ + .++|+ ++++|...++..+ .+.+++.|+...-+|.....+ .+..|+++..++.
T Consensus 90 ~~~~~~l~~~la~~~g~~-~--~~~~~-sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~----~~~~~~~~~~~~~ 161 (407)
T PRK09064 90 NHYHVELERELADLHGKE-A--ALVFT-SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEG----IRRSRCEKHIFRH 161 (407)
T ss_pred HHHHHHHHHHHHHHhCCC-c--EEEEC-cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHH----HHHcCCcEEEECC
Confidence 356778999999999953 2 45555 5555555444433 234565555554344423333 2445777655443
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC--------
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS-------- 318 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~-------- 318 (632)
.|.+++++++.... ..+++++++.++.+.+|...|++ |.++|+++|++++||.+|..|. +.+
T Consensus 162 ------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~-~g~~g~g~~~~ 232 (407)
T PRK09064 162 ------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGM-YGPRGGGIAER 232 (407)
T ss_pred ------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccc-cCCCCCChHHh
Confidence 36788888886321 12468999999999999999999 9999999999999999987432 011
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhh
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 398 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~ 398 (632)
.++. ..+|+++.++.|.|| +.| |+++.+++.++.+.....+ | .+
T Consensus 233 ~~~~-~~~div~~t~sKa~g--~~G-G~~~~~~~~~~~l~~~~~~------------~-----------------~~--- 276 (407)
T PRK09064 233 DGLM-DRIDIIEGTLAKAFG--VMG-GYIAGSAALVDAVRSYAPG------------F-----------------IF--- 276 (407)
T ss_pred cCCC-CCCeEEEEecchhhh--ccC-ceEecCHHHHHHHHHhCcc------------c-----------------cc---
Confidence 1221 257999999999999 446 7777666655433221000 0 00
Q ss_pred hccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHH
Q 006746 399 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLV 478 (632)
Q Consensus 399 e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~ 478 (632)
..+. +.....+.. ++|+++.+. +...++++.+.+++.
T Consensus 277 t~~~-----------------~~~~~~aa~------------------------~al~~~~~~--~~~~~~~~~~~~~l~ 313 (407)
T PRK09064 277 TTSL-----------------PPAIAAAAL------------------------ASIRHLKES--NEERERHQERAAKLK 313 (407)
T ss_pred cCcC-----------------CHHHHHHHH------------------------HHHHHHhcC--HHHHHHHHHHHHHHH
Confidence 0000 001112222 678877664 345678899999999
Q ss_pred HHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHH-HHHHhCCcEEccCccCChHHHhHHHHhhh
Q 006746 479 NALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQ-KLADRENISLSYGSLHHIWFSDKYQKEKD 557 (632)
Q Consensus 479 ~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~-kla~~~gI~lr~G~~c~~~~~~~~~~~~~ 557 (632)
+.|.++ |.+ ++++ .++++.+.+.+. .....+. +|++++||.++.... +.
T Consensus 314 ~~L~~~------g~~---~~~~-----~~~iv~i~~~~~----~~~~~l~~~L~~~~gi~v~~~~~--p~---------- 363 (407)
T PRK09064 314 AALDAA------GIP---VMPN-----ESHIVPVMVGDP----EKCKKASDMLLEEHGIYVQPINY--PT---------- 363 (407)
T ss_pred HHHHHc------CCC---CCCC-----CCCEEEEEeCCH----HHHHHHHHHHHHhCCEEEeeECC--CC----------
Confidence 999987 433 3332 367777776431 1233444 566678999974210 00
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+...||+|++.++|.+|++++++.|++.++.
T Consensus 364 ---------------------~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 364 ---------------------VPRGTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred ---------------------CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 0113358999999999999999999999998764
No 93
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=9.1e-17 Score=174.26 Aligned_cols=169 Identities=11% Similarity=0.035 Sum_probs=131.6
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++....-.+...++|+++-|+. ..++++|++.|++.++.++ +++||+|+++. .|.+ ....+.+.+++.|++|
T Consensus 56 YsR~~nPt~~~le~~la~LEg~~----~a~~~~SGmaAi~~~~~~l-l~~GD~Vv~~~~~Yg~-t~~l~~~~l~~~Gi~v 129 (395)
T PRK08114 56 YGRRGTLTHFSLQEAMCELEGGA----GCALYPCGAAAVANAILAF-VEQGDHVLMTGTAYEP-TQDFCSKILSKLGVTT 129 (395)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC----eEEEEhHHHHHHHHHHHHH-cCCCCEEEEeCCCcHH-HHHHHHHHHHhcCcEE
Confidence 33333334456788899988874 3566678999999999988 89999987654 4543 3444445678899999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEeccccCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDACALGPKDMDSF 319 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaaq~~g~~m~~l 319 (632)
.+++. .+.++++++|+++ ++||.+.+.+|++|.+.|++ |+++||++ |++++||++++.|. -+
T Consensus 130 ~~vd~------~d~~~l~~~l~~~------TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~---~~ 194 (395)
T PRK08114 130 TWFDP------LIGADIAKLIQPN------TKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGV---LF 194 (395)
T ss_pred EEECC------CCHHHHHHhcCCC------ceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCcccc---cc
Confidence 99864 3568899988765 49999999999999999999 99999998 49999999999997 37
Q ss_pred CCCCCCCcEEEEccccccCCCCC--ceEEEEEeCCCc
Q 006746 320 GLSLVRPDFLICSFYQIFGENPS--GFGCLFVKKSTV 354 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~--G~G~L~Vr~~~~ 354 (632)
+..++++|+++.|.||+++. +. +.|+++.+++.+
T Consensus 195 ~pl~~GaDivv~S~tKyl~G-hsdv~~G~v~~~~~~~ 230 (395)
T PRK08114 195 KALDFGIDISIQAGTKYLVG-HSDAMIGTAVANARCW 230 (395)
T ss_pred CHHHcCCcEEEEcCcccccC-CCcceeEEEEcCHHHH
Confidence 77778999999999995553 64 677777665543
No 94
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.77 E-value=9.1e-17 Score=173.09 Aligned_cols=287 Identities=14% Similarity=0.148 Sum_probs=194.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.|++++|++++ .|++|+|+++++.+++.++ +++||+|++.. .|. .. ...++..|++++.++.+ +
T Consensus 70 ~~lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~l-~~~gd~vl~~~p~y~--~~---~~~~~~~g~~~~~~~~~--~ 139 (367)
T PRK02731 70 FELKAALAEKFGVDPE--RIILGNGSDEILELLARAY-LGPGDEVIYSEHGFA--VY---PIAAQAVGAKPVEVPAK--D 139 (367)
T ss_pred HHHHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEecCCHH--HH---HHHHHHcCCeEEEeccc--C
Confidence 4799999999999865 7999999999999999998 78899977653 332 22 23456789999998873 4
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEeccccCCC----CCCCCCCC-C
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDACALGPK----DMDSFGLS-L 323 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaaq~~g~----~m~~ldls-~ 323 (632)
..++++++++.++++ ++++++++.+|+||..+|++ +.++++.. |+++++|.+..... ....++.- .
T Consensus 140 ~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 213 (367)
T PRK02731 140 YGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAK 213 (367)
T ss_pred CCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhh
Confidence 568999999988653 48999999999999999999 88888764 89999999854211 00112211 1
Q ss_pred CCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcccc
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 403 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~ 403 (632)
..-.+++.|+-|.||.+...+|+++++++.++.+.... ..|.
T Consensus 214 ~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~------------~~~~-------------------------- 255 (367)
T PRK02731 214 FPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVR------------QPFN-------------------------- 255 (367)
T ss_pred cCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHcc------------CCCC--------------------------
Confidence 12246677888999842223599998877665443210 0010
Q ss_pred CCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHH
Q 006746 404 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALM 482 (632)
Q Consensus 404 ~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~ 482 (632)
.. .+... .+++.++.. .++.+.++.+.+.+++.+.|.
T Consensus 256 -~~--------------~~~~~---------------------------~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 293 (367)
T PRK02731 256 -VN--------------SLALA---------------------------AAVAALDDDAFVEKSRALNAEGMAWLTEFLA 293 (367)
T ss_pred -CC--------------HHHHH---------------------------HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000 222222221 256777788888888999888
Q ss_pred ccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhh
Q 006746 483 KLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 562 (632)
Q Consensus 483 ~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~ 562 (632)
++ | +.++ | ..++.+.+.+.+. .+...+.+.+.++||.++.|.. +
T Consensus 294 ~~------g---~~~~-~----~~g~~~~i~~~~~----~~~~~~~~~L~~~gI~v~~~~~--------~---------- 337 (367)
T PRK02731 294 EL------G---LEYI-P----SVGNFILVDFDDG----KDAAEAYQALLKRGVIVRPVAG--------Y---------- 337 (367)
T ss_pred HC------C---CccC-C----CCceEEEEECCCC----CCHHHHHHHHHHCCEEEEeCCC--------C----------
Confidence 76 3 2333 2 2477888877431 4556666666678999986521 0
Q ss_pred hhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 563 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ ..+.||+|++ +.+|+++|++.|++++++
T Consensus 338 -----------------~-~~~~iRis~~---~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 338 -----------------G-LPNALRITIG---TEEENRRFLAALKEFLAA 366 (367)
T ss_pred -----------------C-CCCeEEEecC---CHHHHHHHHHHHHHHHhc
Confidence 0 1358999986 789999999999998764
No 95
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=1.4e-16 Score=175.41 Aligned_cols=168 Identities=14% Similarity=0.154 Sum_probs=129.9
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++......+..++++++++|+. +.|+|++|+ +|+.+++.++ +++||+|++ ..+|.+. ...+.+.+++.|++|
T Consensus 63 Y~r~~~pt~~~le~~la~l~g~~---~~v~fsSG~-~Ai~~al~~l-l~~Gd~VI~~~~~y~~t-~~~~~~~l~~~Gi~v 136 (437)
T PRK05613 63 YSRLTNPTVEALENRIASLEGGV---HAVAFASGQ-AAETAAILNL-AGAGDHIVTSPRLYGGT-ETLFLVTLNRLGIEV 136 (437)
T ss_pred eeCccChHHHHHHHHHHHHhCCC---eEEEeCCHH-HHHHHHHHHh-cCCCCEEEECCCccHHH-HHHHHHHHHhcCeEE
Confidence 44445567789999999999984 356666555 8888888887 789999775 4577753 333345668899999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
++++ + + .++++++++|++++ +++.+.+.+|++|...|++ |+++||++|++++||++|+.|....++
T Consensus 137 ~~vd-~-~---~d~e~l~~~l~~~t------k~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~-- 203 (437)
T PRK05613 137 TFVE-N-P---DDPESWQAAVQPNT------KAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPL-- 203 (437)
T ss_pred EEEC-C-C---CCHHHHHHhCCccC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccChH--
Confidence 9997 2 2 27889999887654 7888899999999999999 999999999999999999887522233
Q ss_pred CCCCCcEEEEccccccCCCCCceEEEEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
.+++|++++|+||++|.+..|+|.+++.+
T Consensus 204 -~~GaDivv~S~~K~l~G~gd~~gG~vv~~ 232 (437)
T PRK05613 204 -ELGADVVVASLTKFYTGNGSGLGGVLIDG 232 (437)
T ss_pred -HhCCCEEEeeccceecCCCcceeEEEEec
Confidence 46899999999998882113568888843
No 96
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.77 E-value=1.4e-16 Score=172.34 Aligned_cols=172 Identities=13% Similarity=0.086 Sum_probs=131.8
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+.......++.++++++++|.+ ..++++++++|+.+++.++ .++||+|++. ..|++ ....+...++..|+++
T Consensus 34 y~r~~~p~~~~le~~la~l~g~~----~a~~~~sG~~Ai~~~l~~l-~~~gd~Vl~~~~~y~~-~~~~~~~~~~~~g~~~ 107 (369)
T cd00614 34 YSRIGNPTVDALEKKLAALEGGE----AALAFSSGMAAISTVLLAL-LKAGDHVVASDDLYGG-TYRLFERLLPKLGIEV 107 (369)
T ss_pred eECCCChhHHHHHHHHHHHHCCC----CEEEEcCHHHHHHHHHHHH-cCCCCEEEECCCCcch-HHHHHHHHHhhcCeEE
Confidence 44334456678999999999974 3567788899999999998 7899997754 45654 3444455667889999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
..++.+ ++++++++++++ ++++.+...+|++|...|++ |+++||++|++++||.+...|....++
T Consensus 108 ~~v~~~------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~~~-- 173 (369)
T cd00614 108 TFVDPD------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPL-- 173 (369)
T ss_pred EEeCCC------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCChh--
Confidence 888753 478888888654 48999999999999999999 999999999999999998777521233
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEeC-CCcccc
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVKK-STVPIL 357 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~-~~~~~L 357 (632)
.+++|+++.|++|.+|. +.. .|+++.++ +.++.+
T Consensus 174 -~~g~Divv~S~tK~l~g-~~~~~gG~v~~~~~~l~~~l 210 (369)
T cd00614 174 -ELGADIVVHSATKYIGG-HSDVIAGVVVGSGEALIQRL 210 (369)
T ss_pred -hhCCcEEEeccceeccC-CCCceEEEEEeCcHHHHHHH
Confidence 35789999999998873 322 67777766 444433
No 97
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.76 E-value=1.6e-17 Score=180.89 Aligned_cols=163 Identities=15% Similarity=0.177 Sum_probs=127.8
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
....+++.++++++++|++ .+++|+|+++|+.+++.++ +++||+|++. ..|.+ ....+...+++.|++++.++
T Consensus 59 ~~p~~~~le~~la~l~g~~----~~v~~ssG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~-t~~~~~~~~~~~G~~v~~vd 132 (390)
T PRK08133 59 TNPTVTMFQERLAALEGAE----ACVATASGMAAILAVVMAL-LQAGDHVVSSRSLFGS-TVSLFEKIFARFGIETTFVD 132 (390)
T ss_pred CChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEccCcchh-HHHHHHHHHHHcCcEEEEEC
Confidence 3456778999999999985 3788899999999999888 7899998754 45654 34444556678999999887
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR 325 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~ 325 (632)
.+ +.++++++|+++ +++|.+...+|++|...|++ |+++||++|+++++|.++..+....++ .++
T Consensus 133 ~~------d~~~l~~~i~~~------tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl---~~g 197 (390)
T PRK08133 133 LT------DLDAWRAAVRPN------TKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPL---KLG 197 (390)
T ss_pred CC------CHHHHHHhcCcC------CeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCch---hhC
Confidence 63 678898888764 48999999999999999999 999999999999999997666421233 347
Q ss_pred CcEEEEccccccCCCCCc--e-EEEEEeCCC
Q 006746 326 PDFLICSFYQIFGENPSG--F-GCLFVKKST 353 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G--~-G~L~Vr~~~ 353 (632)
+|+++.|++|++| +.| + |+++.+++.
T Consensus 198 ~Divv~S~sK~~~--g~g~~~GG~vv~~~~~ 226 (390)
T PRK08133 198 ADVVIHSATKYLD--GQGRVLGGAVVGSKEL 226 (390)
T ss_pred CcEEEeecceeec--CCcceEeEEEEcCHHH
Confidence 8999999999888 445 5 444444443
No 98
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.76 E-value=3.4e-16 Score=171.52 Aligned_cols=304 Identities=15% Similarity=0.129 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+.+++|++++|.+ + .|+|+++ ++|+..++..+. ..+|+.|++.. .|.+ .. ..++..|+++..++.+
T Consensus 92 ~~~~Le~~la~~~g~~-~--~i~~~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s-~~----~~~~~~g~~~~~~~~~ 162 (410)
T PRK13392 92 PHVLLERELADLHGKE-S--ALLFTSG-YVSNDAALSTLGKLLPGCVILSDALNHAS-MI----EGIRRSGAEKQVFRHN 162 (410)
T ss_pred HHHHHHHHHHHHhCCC-C--EEEECcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHH-HH----HHHHHcCCeEEEEeCC
Confidence 4568999999999963 2 5666655 566665555442 34688776654 4543 22 2346678988776532
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC--------C
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS--------F 319 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~--------l 319 (632)
+.+++++.+.... ..++++|++.+++|+||...|++ +.++|+++|+++++|.++..|.- .+ .
T Consensus 163 ------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~~g~g~~~~~ 233 (410)
T PRK13392 163 ------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY-GARGGGIAERD 233 (410)
T ss_pred ------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-CCCCCchhhhc
Confidence 4556666665321 23568999999999999999999 99999999999999999885430 11 1
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
++ ..++|+++.++.|.||. + | |++..+++.++.+..... .|
T Consensus 234 ~~-~~~~div~~tlsK~~g~-~-G-G~~~~~~~~~~~l~~~~~------------~~----------------------- 274 (410)
T PRK13392 234 GL-MDRIDMIQGTLAKAFGC-L-G-GYIAASADLIDFVRSFAP------------GF----------------------- 274 (410)
T ss_pred cC-CCCCcEEEEEChHhhhc-c-c-chhhcCHHHHHHHHHhCc------------ch-----------------------
Confidence 11 12579999999999995 4 4 666656555443321100 00
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
.++. ..+.+...++. ++|+.+...+ ...++.+...+++++
T Consensus 275 ----~~s~----------~~~~~~~~a~~------------------------aaL~~~~~~~--~~~~~~~~~~~~l~~ 314 (410)
T PRK13392 275 ----IFTT----------ALPPAVAAGAT------------------------AAIRHLKTSQ--TERDAHQDRVAALKA 314 (410)
T ss_pred ----hccC----------cCCHHHHHHHH------------------------HHHHHHhcCH--HHHHHHHHHHHHHHH
Confidence 0000 00001112222 6787776543 344677888899999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCH-HHHHHHHHhCCcEEccCccCChHHHhHHHHhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEP-VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 558 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~-~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~ 558 (632)
.|.++ |.+ ++. ..++++.+.+.+. ... +..++|++++||.++.+.. +.
T Consensus 315 ~L~~~------g~~---~~~-----~~~~~~~i~~~~~----~~~~~~~~~L~~~~GI~v~~~~~--p~----------- 363 (410)
T PRK13392 315 KLNAN------GIP---VMP-----SPSHIVPVMVGDP----TLCKAISDRLMSEHGIYIQPINY--PT----------- 363 (410)
T ss_pred HHHHc------CCC---CCC-----CCCCEEEEEeCCH----HHHHHHHHHHHHhCCEEEeeeCC--CC-----------
Confidence 99887 433 222 2456665544321 122 3444566788999974310 00
Q ss_pred hhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhcccccccceeee
Q 006746 559 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVEKARWRYTA 624 (632)
Q Consensus 559 ~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f~~~~~~~~~~ 624 (632)
...+...||+|++.++|.+|+++|++.|+++++.- .-..||-.+
T Consensus 364 --------------------~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~--~~~~~~~~~ 407 (410)
T PRK13392 364 --------------------VPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL--ELPRWREAA 407 (410)
T ss_pred --------------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc--CCccchhhh
Confidence 01134689999999999999999999999987642 115676443
No 99
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.76 E-value=4.4e-16 Score=170.47 Aligned_cols=296 Identities=14% Similarity=0.090 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-CCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPF-MSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~-~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
+..++.++++++++|.+ ..++|+++ ++|...+...+.. .+|+.|++...+|...+.. .+..|++++.++.
T Consensus 90 ~~~~~le~~la~~~g~~---~~~~~~SG-~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~----~~~~g~~~~~~~~- 160 (406)
T PRK13393 90 HYHVLLEAELADLHGKE---AALLFTSG-YVSNWAALSTLGSRLPGCVILSDELNHASMIEG----IRHSRAEKRIFRH- 160 (406)
T ss_pred HHHHHHHHHHHHHhCCC---cEEEeCCc-HHHHHHHHHHhhcCCCCCEEEEccchhHHHHHH----HHHcCCeEEEeCC-
Confidence 46678999999999973 25666555 5677766665532 2677777654344323333 2446788776653
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCC--------
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSF-------- 319 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~l-------- 319 (632)
.|.+++++.+...+ .+++++|++.++.+.+|...|++ |.++|+++|+++++|.+|..|. +.+.
T Consensus 161 -----~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~-~g~~G~g~~~~~ 232 (406)
T PRK13393 161 -----NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGL-YGPRGGGIAERE 232 (406)
T ss_pred -----CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccc-cCCCCCchhhhc
Confidence 36677777775321 12468999999999999999999 9999999999999999987543 1111
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
++. .++|+++.++=|.+|. + | |++..+++.++.+..... .|
T Consensus 233 ~~~-~~~~i~~~tlsKa~g~-~-G-G~~~~~~~~~~~l~~~~~------------~~----------------------- 273 (406)
T PRK13393 233 GLA-DRLTIIEGTLAKAFGV-M-G-GYITGSAALCDFIRSFAS------------GF----------------------- 273 (406)
T ss_pred CCC-CCCeEEEEeCchhhcc-c-C-ceeeCCHHHHHHHHHhCc------------Cc-----------------------
Confidence 121 2368888999999994 3 4 665545544333321000 00
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
.|+ ++.+.+...+.. ++|+++.+.+.. ..+.+.+.++|++
T Consensus 274 ----~~t----------~~~~p~~~aa~~------------------------aaL~~~~~~~~~--~~~~~~~~~~l~~ 313 (406)
T PRK13393 274 ----IFT----------TSLPPAVAAGAL------------------------ASVRHLKASSAE--RERHQDRVARLRA 313 (406)
T ss_pred ----eec----------CccCHHHHHHHH------------------------HHHHHHhhCHHH--HHHHHHHHHHHHH
Confidence 000 000111122222 678877654322 3567788899999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHH-HHHHhCCcEEccCccCChHHHhHHHHhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQ-KLADRENISLSYGSLHHIWFSDKYQKEKDN 558 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~-kla~~~gI~lr~G~~c~~~~~~~~~~~~~~ 558 (632)
.|.++ |.+.+ + ..++++.+.+.+. .....+. +|++++||.++.+.+ +.
T Consensus 314 ~L~~~------g~~~~----~----~~~~i~~v~~~~~----~~~~~l~~~L~~~~Gi~v~~~~~--p~----------- 362 (406)
T PRK13393 314 RLDKA------GIPHL----P----NPSHIVPVMVGDP----VLCKQISDELLDRYGIYVQPINY--PT----------- 362 (406)
T ss_pred HHHHc------CCCcC----C----CCCCeEEEEeCCH----HHHHHHHHHHHHhCCEEEEeECC--CC-----------
Confidence 99887 43322 1 2567777755331 1223444 455667999975310 00
Q ss_pred hhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 559 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 559 ~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+...||+|++.++|.+||+++++.|+++++.
T Consensus 363 --------------------~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 363 --------------------VPRGTERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred --------------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 0123358999999999999999999999998764
No 100
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.76 E-value=3.8e-16 Score=168.97 Aligned_cols=295 Identities=14% Similarity=0.157 Sum_probs=190.5
Q ss_pred HHHHHHHHH----cC--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDF----LN--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~----l~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.++++ +| ++++ +|++|+|+++|+.+++..+ +++||+|++. ..|+. . ...++..|++++.++
T Consensus 65 ~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~-~----~~~~~~~g~~~~~v~ 136 (382)
T PRK06108 65 ELREALARYVSRLHGVATPPE--RIAVTSSGVQALMLAAQAL-VGPGDEVVAVTPLWPN-L----VAAPKILGARVVCVP 136 (382)
T ss_pred HHHHHHHHHHHHHhCCCcCcc--eEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccc-h----HHHHHHCCCEEEEee
Confidence 445555554 57 5554 7999999999999999988 6889997654 44542 1 234577899999999
Q ss_pred ccCC--ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccCCC-----C
Q 006746 247 FSWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALGPK-----D 315 (632)
Q Consensus 247 ~~~~--~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~g~-----~ 315 (632)
.+.. +..++.++|++.++++ +++++++..+|+||..+|. + |+++|+++|+++++|.+..... .
T Consensus 137 ~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~ 210 (382)
T PRK06108 137 LDFGGGGWTLDLDRLLAAITPR------TRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGR 210 (382)
T ss_pred CCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCC
Confidence 8632 3458999999888643 4889999999999999975 5 6788999999999998744211 0
Q ss_pred C-CCCCCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 316 M-DSFGLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 316 m-~~ldls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
. ..+++.. .+-.+++.|+.|.||.+...+|+++++++.++.+...... . +
T Consensus 211 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~---------~--~----------------- 262 (382)
T PRK06108 211 APSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEY---------N--T----------------- 262 (382)
T ss_pred CCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHh---------c--c-----------------
Confidence 0 0123322 2346889999999984223379999887766544321000 0 0
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.+.+.+ ...+. ..+|+...+ -++.+.++.+.+
T Consensus 263 ------~~~~~~-----------------~q~a~------------------------~~~l~~~~~-~~~~~~~~~~~~ 294 (382)
T PRK06108 263 ------SCVAQF-----------------VQRAA------------------------VAALDEGED-FVAELVARLRRS 294 (382)
T ss_pred ------cCCChH-----------------HHHHH------------------------HHHHhCChH-HHHHHHHHHHHH
Confidence 000000 00000 022221111 146677888888
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEE-EEEEccCCCCccCH-HHHHHHHHhCCcEEccCccCChHHHhH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPAL-AFNVFDWKREKIEP-VLVQKLADRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~iv-aFnv~~~~G~~i~~-~~V~kla~~~gI~lr~G~~c~~~~~~~ 551 (632)
.+++++.|.++ +.++++.| .++.+ -+.+.+. .+. +.++++++++||.++.|..+.
T Consensus 295 ~~~l~~~L~~~--------~~~~~~~p-----~~g~~~~~~l~~~----~~~~~~~~~ll~~~gV~v~pg~~f~------ 351 (382)
T PRK06108 295 RDHLVDALRAL--------PGVEVAKP-----DGAMYAFFRIPGV----TDSLALAKRLVDEAGLGLAPGTAFG------ 351 (382)
T ss_pred HHHHHHHHHhC--------CCCcccCC-----CeeEEEEEeCCCC----CCHHHHHHHHHHhCCEEEeCchhhC------
Confidence 89999999876 44666554 24443 3444331 233 344567788999998763211
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.+.||+|++. +.++++..++.|++++.
T Consensus 352 ----------------------------~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 352 ----------------------------PGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred ----------------------------CCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 1134699999998 89999999999988763
No 101
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=4.3e-16 Score=171.52 Aligned_cols=165 Identities=15% Similarity=0.112 Sum_probs=128.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
....+..+++|+++.|++ ..++++|++.|+.+++.++ .++||+|++ ...|.+ ....+...+++.|++++.++
T Consensus 68 ~p~~~~Le~~lA~l~g~~----~av~~sSG~aAi~~al~al-l~~Gd~Vv~~~~~y~~-t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV----AALLLASGQAAETFAILNL-AGAGDHIVSSPRLYGG-TYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred CchHHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEeCCcchH-HHHHHHHHhhcCeEEEEEEC-
Confidence 344568899999999985 2577789999999999888 789999775 445543 44444555677899988885
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
+ + .++++++++|+++ +++|.+.+.+|++|...|++ |+++||++|+.++||+++..|....++ ++++
T Consensus 141 d-~---~d~e~l~~ai~~~------tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl---~~Ga 207 (436)
T PRK07812 141 D-P---DDLDAWRAAVRPN------TKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPL---EHGA 207 (436)
T ss_pred C-C---CCHHHHHHhCCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCch---hcCC
Confidence 2 2 2788898888764 48999999999999999999 999999999999999999887532233 4689
Q ss_pred cEEEEccccccCCCCCceEEEEEeCCC
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVKKST 353 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr~~~ 353 (632)
|+++.|+||++|..-..+|.+++....
T Consensus 208 Divv~S~tK~lgg~G~~i~G~vv~~~~ 234 (436)
T PRK07812 208 DIVVHSATKYLGGHGTAIAGVIVDGGT 234 (436)
T ss_pred CEEEEecccccCCCCCeEEEEEEcCCc
Confidence 999999999888311237888886543
No 102
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=1.2e-16 Score=171.80 Aligned_cols=167 Identities=10% Similarity=0.139 Sum_probs=122.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC-CeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSV-KNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g-d~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
.+.|+++++++|++++ +|++|+|+++++.+++.++ .++| |+|++.. .|. .....++..|++++.+|.+ .
T Consensus 63 ~~Lr~aia~~~~~~~~--~I~it~Gs~~~i~~~~~~~-~~~g~d~vlv~~P~y~-----~y~~~~~~~g~~v~~v~~~-~ 133 (354)
T PRK04635 63 PELINAYSAYAGVAPE--QILTSRGADEAIELLIRAF-CEPGQDSIACFGPTYG-----MYAISAETFNVGVKALPLT-A 133 (354)
T ss_pred HHHHHHHHHHhCcCHH--HEEEeCCHHHHHHHHHHHh-cCCCCCeEEEcCCChH-----HHHHHHHHcCCEEEEEecC-C
Confidence 5789999999999886 7999999999999999998 5677 7876543 332 1234567899999999986 4
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh-CCcEEEEeccccCCC-CCCCCCCCC-CCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE-NDWHILIDACALGPK-DMDSFGLSL-VRP 326 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~-~g~~vlvDaaq~~g~-~m~~ldls~-~~~ 326 (632)
++.++.+.++ .+ + +++++.+++.+|+||..+|.+ +.++++. .++++++|.+..--. +....++.. .+-
T Consensus 134 ~~~~~~~~l~-~~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~ 205 (354)
T PRK04635 134 DYQLPLDYIE-QL-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPN 205 (354)
T ss_pred CCCCCHHHHH-hc-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCC
Confidence 5667888776 33 2 358999999999999999999 8888875 369999999853211 000111111 111
Q ss_pred cEEEEccccccCCCCCc--eEEEEEeCCCccccC
Q 006746 327 DFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 358 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~ 358 (632)
=+++.||+|+||. .| +|+++++++.++.+.
T Consensus 206 ~iv~~S~SK~~~l--~GlRlG~~i~~~~~~~~l~ 237 (354)
T PRK04635 206 LVVLRTLSKAFAL--AGARCGFTLANEELIEILM 237 (354)
T ss_pred EEEEechHHHhhh--hHHHHhhhhCCHHHHHHHH
Confidence 2578899999994 46 699998887765553
No 103
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.75 E-value=4.9e-17 Score=177.81 Aligned_cols=168 Identities=11% Similarity=0.082 Sum_probs=129.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+++.++++++++|++. .+.++|++.|+.+++.++ +++||+|++....+.....+....++..|++++.++.+
T Consensus 64 ~p~~~~le~~lA~l~g~~~----~i~~~sG~~Al~~~l~~l-l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 138 (403)
T PRK07503 64 NPTLALLEQRMASLEGGEA----AVALASGMGAITATLWTL-LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT 138 (403)
T ss_pred CchHHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHH-cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC
Confidence 3456789999999999962 455668899999999888 89999987654333324444455667889999988763
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
++++++++++++ +++|.+...+|+||...|++ |+++|+++|+++++|.++..|....+++ +++|
T Consensus 139 ------d~~~l~~~i~~~------tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~---~g~D 203 (403)
T PRK07503 139 ------DPAALKAAISDK------TRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLE---LGAD 203 (403)
T ss_pred ------CHHHHHHhcCcc------CcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchh---hCCC
Confidence 678899888764 48999999999999999999 9999999999999999987764212442 5889
Q ss_pred EEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 328 FLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
+++.|++|++|. +.+ .|+++.+++.++++
T Consensus 204 i~v~S~tK~l~g-~gd~~gG~v~~~~~l~~~l 234 (403)
T PRK07503 204 LVVHSATKYLGG-HGDITAGLVVGGKALADRI 234 (403)
T ss_pred EEEccccccccC-CCceeEEEEEcCHHHHHHH
Confidence 999999998883 333 67777655554444
No 104
>PLN02822 serine palmitoyltransferase
Probab=99.75 E-value=6.9e-16 Score=172.33 Aligned_cols=308 Identities=10% Similarity=0.103 Sum_probs=202.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
.+...+.+++|+++++.+ + .|+|+++.+ ++..++.++ .++||.|+....+|..... ..+-.|++++.++.+
T Consensus 153 ~~~~~~Lee~La~~~~~~-~--~i~~s~G~~-a~~sai~a~-~~~gd~Ii~d~~~H~s~~~----~~~ls~~~~~~~~~n 223 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTP-D--SILYSYGLS-TIFSVIPAF-CKKGDIIVADEGVHWGIQN----GLYLSRSTIVYFKHN 223 (481)
T ss_pred HHHHHHHHHHHHHHhCCC-C--EEEECCHHH-HHHHHHHHh-CCCCCEEEEeCCccHHHHH----HHHHcCCeEEEECCC
Confidence 466779999999999975 2 688887766 567788888 5789988876555542222 233457888888654
Q ss_pred CCccccCHHHHHHHHHhcCcC---CCc-eeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC-------C
Q 006746 249 WPRLRINSEKLRKMVVSKGKK---KKQ-RGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-------M 316 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~---~~~-~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-------m 316 (632)
+.++++..+.+..+. +++ ++++++..+.+.+|.+.|++ |+++|+++|+++++|-++..|.- .
T Consensus 224 ------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~ 297 (481)
T PLN02822 224 ------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLS 297 (481)
T ss_pred ------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChH
Confidence 345555555431110 122 37999999999999999999 99999999999999999875430 0
Q ss_pred CCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 317 DSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
.-++++...+|+++.|+.|.+| +.| |+++.+++.++.+..... +.
T Consensus 298 e~~~v~~~~~dii~~s~sKalg--~~G-G~i~g~~~ii~~~~~~~~-~~------------------------------- 342 (481)
T PLN02822 298 EHFGVPIEKIDIITAAMGHALA--TEG-GFCTGSARVVDHQRLSSS-GY------------------------------- 342 (481)
T ss_pred HHcCCCCCCCeEEEecchhhhh--hCC-eEEEcCHHHHHHHHhcCC-ce-------------------------------
Confidence 1234433478999999999999 557 888877776654432110 00
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
.|+ .+.|...+.. ..++|+.+.. .+.+.++.+.++++
T Consensus 343 -------~fs------------a~lPp~~~~A----------------------a~~aL~~l~~--~~~~~~~l~~~~~~ 379 (481)
T PLN02822 343 -------VFS------------ASLPPYLASA----------------------AITAIDVLED--NPSVLAKLKENIAL 379 (481)
T ss_pred -------eec------------cccCHHHHHH----------------------HHHHHHHHHh--CHHHHHHHHHHHHH
Confidence 000 0001110000 0156666543 25677899999999
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc-----cCHHHHHHHHHhCCcEEccCccCChHHHhH
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-----IEPVLVQKLADRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~-----i~~~~V~kla~~~gI~lr~G~~c~~~~~~~ 551 (632)
+++.|.++ +.+.+..+ ..++++.+.+.+..+.. ...+.+++|++++||.+..+..-..
T Consensus 380 l~~~L~~~--------~g~~~~~~----~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~----- 442 (481)
T PLN02822 380 LHKGLSDI--------PGLSIGSN----TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTL----- 442 (481)
T ss_pred HHHHHHhc--------CCcccCCC----CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCc-----
Confidence 99999886 33444333 35788888886431211 1234566777788999875421100
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
........+|++++..+|.+||+++++.|++++.+
T Consensus 443 --------------------------~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 443 --------------------------DKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred --------------------------CCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 00112347999999999999999999999988765
No 105
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.75 E-value=4.5e-16 Score=169.45 Aligned_cols=214 Identities=13% Similarity=0.086 Sum_probs=149.4
Q ss_pred CceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 108 NHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 108 ~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
+.++|+-+... +.|..+.+++.+++...... .| ..+. | ..++.+.+++.+++++|++
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~-------------~Y--~~~~-----G--~~~lr~~~~~~l~~~~g~~ 85 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLANPENH-------------KY--QAVQ-----G--IPPLLEAITQKLQQDNGIE 85 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhCCCCC-------------CC--CCCC-----C--CHHHHHHHHHHHHHHhCCC
Confidence 46777766654 46777888776543211000 00 0000 1 2367788899999999985
Q ss_pred CC-CccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 187 EN-DYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 187 ~~-ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
.+ +..|++|+|+++|+.+++.++ +.+||+|++. ..|.. + ...++..|++++.++.+ .+..++.+++++.++
T Consensus 86 ~~~~~~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~--~---~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~ 158 (389)
T PRK05957 86 LNNEQAIVVTAGSNMAFMNAILAI-TDPGDEIILNTPYYFN--H---EMAITMAGCQPILVPTD-DNYQLQPEAIEQAIT 158 (389)
T ss_pred CCCCCeEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCcC--H---HHHHHhcCCEEEEeecC-CCCCcCHHHHHHhcC
Confidence 33 347999999999999999888 7899997764 34442 1 12346689999999986 556799999999886
Q ss_pred hcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEecccc--C--CCCCCC-CCC-CCCCCcEEEEccc
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACAL--G--PKDMDS-FGL-SLVRPDFLICSFY 334 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~--~--g~~m~~-ldl-s~~~~Df~~~S~h 334 (632)
++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.+.. . +..+.+ ..+ ....--+++.|+-
T Consensus 159 ~~------~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 232 (389)
T PRK05957 159 PK------TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLS 232 (389)
T ss_pred cC------ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecch
Confidence 54 489999999999999998 77 8899999999999999732 1 111011 111 1122347888999
Q ss_pred cccCCCCCc--eEEEEEeCCCccccC
Q 006746 335 QIFGENPSG--FGCLFVKKSTVPILV 358 (632)
Q Consensus 335 K~~G~~P~G--~G~L~Vr~~~~~~L~ 358 (632)
|.+| +.| +|++++.++.++.+.
T Consensus 233 K~~g--~~GlRiG~~~~~~~~~~~~~ 256 (389)
T PRK05957 233 KAYG--FASWRIGYMVIPIHLLEAIK 256 (389)
T ss_pred hhcc--CccceeEEEecCHHHHHHHH
Confidence 9999 448 899998777665443
No 106
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.75 E-value=4.3e-16 Score=168.32 Aligned_cols=156 Identities=10% Similarity=0.051 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
....+.+++|+++. .+ +.++++|+++|+.+++.++ +++||+|++.. .|+. ........+++.|++++.++.+
T Consensus 51 p~~~~Le~~lA~l~--~~---~~v~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~-~~~~~~~~l~~~G~~v~~v~~~ 123 (366)
T PRK07582 51 PTWRALEAALGELE--GA---EALVFPSGMAAITAVLRAL-LRPGDTVVVPADGYYQ-VRALAREYLAPLGVTVREAPTA 123 (366)
T ss_pred ccHHHHHHHHHHHc--CC---CEEEECCHHHHHHHHHHHh-cCCCCEEEEeCCCcHh-HHHHHHHHHhcCeEEEEEECCC
Confidence 34568899999998 22 3566778889999999988 89999987654 4443 3333334456789999999875
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
+.. + .+.+ +++|+.+...+|+||...|++ |+++||++|+.++||.++..+....+++ +++|
T Consensus 124 -~~~----~----~~~~------~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~---~g~D 185 (366)
T PRK07582 124 -GMA----E----AALA------GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE---LGAD 185 (366)
T ss_pred -ChH----H----Hhcc------CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh---cCCc
Confidence 111 1 2222 358999999999999999999 9999999999999999875433223554 4789
Q ss_pred EEEEccccccCCCCCce--EEEEEeC
Q 006746 328 FLICSFYQIFGENPSGF--GCLFVKK 351 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~--G~L~Vr~ 351 (632)
+++.|++|+++. |.|+ |+++.++
T Consensus 186 ivv~S~sK~l~G-~~g~~~G~v~~~~ 210 (366)
T PRK07582 186 LVVASDTKALTG-HSDLLLGYVAGRD 210 (366)
T ss_pred EEEecccccccC-CCCeeEEEEEcCc
Confidence 999999997754 6674 7777653
No 107
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.74 E-value=2.8e-16 Score=170.24 Aligned_cols=166 Identities=12% Similarity=0.035 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
......+++++++.|+. .+++++|+++|+..++.++ +++||+|++ ...|++ ....+....++.|+++..++..
T Consensus 50 Pt~~~lE~~lA~l~g~~----~~~~~~sG~~Ai~~al~al-l~~GD~Vl~~~~~y~~-t~~~~~~~~~~~gi~v~~~d~~ 123 (377)
T TIGR01324 50 LTHFALQDAMCELEGGA----GCYLYPSGLAAVTNSILAF-VKAGDHVLMVDSAYEP-TRYFCDIVLKRMGVDITYYDPL 123 (377)
T ss_pred ccHHHHHHHHHHHhCCC----cEEEECcHHHHHHHHHHHh-cCCCCEEEEcCCCcHH-HHHHHHHHHHhcCcEEEEECCC
Confidence 34457899999999974 4788999999999999999 899999875 446654 3333334456789998877542
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
+.++++++++++ ++++++.+.+|++|.+.|++ |+++|+++|++++||.+++.|....++ ++++|
T Consensus 124 ------~~e~l~~~i~~~------tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl---~~gaD 188 (377)
T TIGR01324 124 ------IGEDIATLIQPN------TKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPL---EHGVD 188 (377)
T ss_pred ------CHHHHHHhcCCC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCcc---ccCce
Confidence 226788887764 48999999999999999999 999999999999999999988632233 46899
Q ss_pred EEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 328 FLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
+++.|++|++|. +.+ .|+++.+++.++.+
T Consensus 189 ivv~S~tK~l~G-~~d~~gG~v~~~~~~~~~l 219 (377)
T TIGR01324 189 ISIQAGTKYLVG-HSDIMIGTVVANARTWDQL 219 (377)
T ss_pred EEEecCceeccC-CCCceEEEEEeCHHHHHHH
Confidence 999999998774 444 46677666554433
No 108
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.74 E-value=6.9e-16 Score=170.25 Aligned_cols=214 Identities=13% Similarity=0.171 Sum_probs=153.3
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
.+.+|+++.|.+++|+.+++++.+++... .|+.-....| .....++.+++.+++++|+.
T Consensus 80 tg~v~~tNlg~s~l~~~vieAv~~~~~~y--------------------~~l~~~l~~g-~~g~r~~~le~~lA~l~gae 138 (454)
T TIGR00474 80 TGVVLHTNLGRAPLAEEAIEAVTDAARGY--------------------SNLEYDLETG-KRGSRYSHVEGLLCELTGAE 138 (454)
T ss_pred CCcEEeccCCCCCCCHHHHHHHHHHHhcc--------------------cchhcccccc-ccchHHHHHHHHHHHHhCCC
Confidence 45789999999999999999987654321 1221000011 12356789999999999996
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-ccc--chhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHH
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYE--SEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~--s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
. .+ +++|++.|+.+++.. +.+||+|+++. +|. ..+. .+.+..++.|++++.++.+ ...+.++++++|
T Consensus 139 ~---al-vv~sg~aAi~l~l~~--l~~GdeVIvs~~e~v~~ggs~-~i~~~~~~~G~~~~~v~~~---~~~~l~dle~aI 208 (454)
T TIGR00474 139 D---AL-VVNNNAAAVLLALNT--LAKGKEVIVSRGELVEIGGSF-RIPDVMEQSGAKLVEVGTT---NRTHLKDYEDAI 208 (454)
T ss_pred c---EE-EECCHHHHHHHHHHH--hCCcCEEEECCChhhhhcchh-hHHHHHHHcCCEEEEeCCC---CCCCHHHHHHhc
Confidence 3 34 567888899988865 57899987654 432 1111 1233457789999988653 235789999999
Q ss_pred HhcCcCCCceeEEEEeccCCCC--c--cccchH-HHHHHhhCCcEEEEecccc---------CCCCCCCCCCCCCCCcEE
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMT--G--ARYPYL-WMRIAQENDWHILIDACAL---------GPKDMDSFGLSLVRPDFL 329 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~T--G--~~~pl~-i~~~a~~~g~~vlvDaaq~---------~g~~m~~ldls~~~~Df~ 329 (632)
+++| +++.+.|.+|++ | ...|++ |+++||++|+++++|+++. ++......+.-++++|++
T Consensus 209 ~~~T------~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv 282 (454)
T TIGR00474 209 TENT------ALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLV 282 (454)
T ss_pred CcCC------EEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEE
Confidence 7754 899999999984 6 478999 9999999999999998621 122100124456799999
Q ss_pred EEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 330 ICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 330 ~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
++|+||++|. | ..|+++.+++.++.++.
T Consensus 283 ~fSg~K~LgG-p-~~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 283 TFSGDKLLGG-P-QAGIIVGKKELIERLKK 310 (454)
T ss_pred EecCccccCC-C-eEEEEEECHHHHHhhhh
Confidence 9999998874 6 58999999988776654
No 109
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=4.9e-16 Score=166.42 Aligned_cols=203 Identities=15% Similarity=0.131 Sum_probs=142.2
Q ss_pred CCceEeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
++.++|+.+...+ .|..+.+++.+.+... . ..|... . ..+.|+.|++++++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~----------------------~---~~y~~~--~-~~~lr~aia~~~~~ 75 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDD----------------------L---RLYPDP--N-ADALRQAIAAYYGL 75 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhh----------------------h---hcCCCC--c-HHHHHHHHHHHhCC
Confidence 4578888777665 3667777765433210 0 001110 1 25899999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
+++ +|++|+|+++|+.+++.++ +++||+|++.. .|+ .....++..|++++.++.+ +++.+|.+++++
T Consensus 76 ~~~--~I~it~G~~~al~~~~~~l-~~~gd~vlv~~P~y~-----~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~--- 143 (353)
T PRK05387 76 DPE--QVFVGNGSDEVLAHAFLAF-FNHDRPLLFPDITYS-----FYPVYAGLYGIPYEEIPLD-DDFSIDVEDYLR--- 143 (353)
T ss_pred CHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEeCCCHH-----HHHHHHHHcCCEEEEeecC-CCCCCCHHHHHh---
Confidence 876 7999999999999999998 78999977543 443 2234467789999999986 556788888752
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC-CcEEEEecccc--CCCCCCCCCCCCCCCcEEEEccccccCCC
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN-DWHILIDACAL--GPKDMDSFGLSLVRPDFLICSFYQIFGEN 340 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~-g~~vlvDaaq~--~g~~m~~ldls~~~~Df~~~S~hK~~G~~ 340 (632)
. +++++++..+|+||..+|.+ +.++++.. ++++++|.+.. .+....++ ++..+-.+++.|+.|.+|.+
T Consensus 144 -~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~ 215 (353)
T PRK05387 144 -P------NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPL-IDRYPNLLVVQTFSKSRSLA 215 (353)
T ss_pred -c------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHH-HhhCCCEEEEEehhHhhcch
Confidence 2 26789999999999999999 98888765 99999998642 12110111 12234479999999998852
Q ss_pred CCceEEEEEeCCCcccc
Q 006746 341 PSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 341 P~G~G~L~Vr~~~~~~L 357 (632)
.-.+|+++..++.++.+
T Consensus 216 GlR~G~~~~~~~~~~~l 232 (353)
T PRK05387 216 GLRVGFAIGHPELIEAL 232 (353)
T ss_pred hhhceeeecCHHHHHHH
Confidence 22378888776655444
No 110
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=1.2e-15 Score=167.94 Aligned_cols=161 Identities=15% Similarity=0.138 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
....+...++|+++.|+. ..++|+|+++|+..++.++ +++||+|++. ..|+. ....+...+++.|++++.++.
T Consensus 63 ~p~~~~Le~~lA~leg~~----~al~~~sG~~Ai~~al~~l-l~~GD~Vlv~~~~y~~-t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGI----GALAVSSGQAAITYSILNI-ASAGDEIVSSSSLYGG-TYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred CchHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEccCchhh-HHHHHHHHHHhCCEEEEEECC
Confidence 344567889999999974 4678899999999999888 7899998754 45554 444556677889999998875
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
.++++++++|+++ +++|.+.+.+|+||...|++ |+++||++|+++++|.++..|.. ..++ ++++
T Consensus 137 ------~d~e~l~~ai~~~------tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~--~~pl-~~ga 201 (431)
T PRK08248 137 ------SDPENFEAAITDK------TKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL--LRPI-EHGA 201 (431)
T ss_pred ------CCHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc--CChh-HcCC
Confidence 3778999888764 48999999999999999999 99999999999999999887653 2333 4799
Q ss_pred cEEEEccccccCCCCCc--eEEEEEeCC
Q 006746 327 DFLICSFYQIFGENPSG--FGCLFVKKS 352 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G--~G~L~Vr~~ 352 (632)
|+++.|+||++|. | | +|.+++.+.
T Consensus 202 Divv~S~tK~lgg-~-g~~~Gg~v~~~~ 227 (431)
T PRK08248 202 DIVVHSATKFIGG-H-GTSIGGVIVDSG 227 (431)
T ss_pred CEEEEcCccccCC-C-CCceEEEEEeCC
Confidence 9999999999984 3 5 788888644
No 111
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=4.7e-16 Score=168.93 Aligned_cols=166 Identities=16% Similarity=0.128 Sum_probs=127.0
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++....-.+..+++++++.|+. .+++|+|+++|+.++..++ +++||+|++.. .|.+ .+..+....++.|+++
T Consensus 47 Y~R~~npt~~~Le~~lA~leg~e----~ivvt~gg~~Ai~~~l~al-l~~Gd~Il~~~~~y~~-~~~~~~~~~~~~gi~v 120 (388)
T PRK08861 47 YTRSGNPNRGLLEQTLSELESGK----GAVVTNCGTSALNLWVSAL-LGPDDLIVAPHDCYGG-TYRLFNTRANKGDFKV 120 (388)
T ss_pred ccCCCCchHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCCchHH-HHHHHHHHHhcCCeEE
Confidence 33333344568899999999963 6999999999999999998 78999987654 4543 2333334455678888
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
..++. .+.++++++++++ ++++.+...+|+||..+|++ |.++|+++|++++||.++..|..-.+++
T Consensus 121 ~~vd~------~d~e~l~~~i~~~------tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~- 187 (388)
T PRK08861 121 QFVDQ------SDAAALDAALAKK------PKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLE- 187 (388)
T ss_pred EEECC------CCHHHHHHhcCcC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCcc-
Confidence 88752 4778898888764 48999999999999999999 9999999999999999988774223554
Q ss_pred CCCCCcEEEEccccccCCCCCc-e-EEEEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG-F-GCLFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G-~-G~L~Vr~ 351 (632)
+++|+++.|+||++|. |.+ + |++..++
T Consensus 188 --~GaDivv~S~tK~l~G-~~d~~gG~i~~~~ 216 (388)
T PRK08861 188 --LGADFVIHSTTKYING-HSDVIGGVLITKT 216 (388)
T ss_pred --cCCCEEEeecceeccC-CCcceeEEEEecH
Confidence 4899999999997764 544 3 4444443
No 112
>PRK07908 hypothetical protein; Provisional
Probab=99.74 E-value=5.2e-16 Score=166.33 Aligned_cols=282 Identities=15% Similarity=0.173 Sum_probs=185.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCcc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRL 252 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~ 252 (632)
.+.|+.|++++|++++ +|++|+|+++|+.+++. + ++++.++. +++ .......++..|++++.++.+ ++.
T Consensus 61 ~~lr~aia~~~~~~~~--~I~it~Ga~~al~~~~~-l--~~~~viv~---~P~--y~~~~~~~~~~G~~i~~v~~~-~~~ 129 (349)
T PRK07908 61 RRARAAVAARHGRTPD--EVLLLAGAAEGFALLAR-L--RPRRAAVV---HPS--FTEPEAALRAAGIPVHRVVLD-PPF 129 (349)
T ss_pred HHHHHHHHHHhCcChh--hEEECCCHHHHHHHHHh-c--CCCeEEEe---CCC--ChHHHHHHHHcCCEEEeeccC-ccc
Confidence 4799999999999876 79999999999999998 4 56544443 343 222345667899999999987 335
Q ss_pred ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecccc--CCCCCCCCCCCCCC-Cc-
Q 006746 253 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACAL--GPKDMDSFGLSLVR-PD- 327 (632)
Q Consensus 253 ~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~--~g~~m~~ldls~~~-~D- 327 (632)
.++.+++ .+ +++++++++.+|+||..+|.+ |.++|+. +.++++|.++. .+.. ...+.... .+
T Consensus 130 ~~d~~~l----~~------~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~--~~~l~~~~~~~~ 196 (349)
T PRK07908 130 RLDPAAV----PD------DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGE--PESLAGDDLPGV 196 (349)
T ss_pred CcChhHh----cc------CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCC--ccccccccCCCE
Confidence 6777644 22 247999999999999999999 9999975 77888899763 2221 22221111 23
Q ss_pred EEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCc
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 407 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~ 407 (632)
+++.|++|.+|.+...+|+++++++.++.+.+... .|.. ++.
T Consensus 197 i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~------------~~~~----------------------~~~---- 238 (349)
T PRK07908 197 LVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRA------------HWPV----------------------GTL---- 238 (349)
T ss_pred EEEeecccccCCccceeeeeecCHHHHHHHHhcCC------------CCCc----------------------cHH----
Confidence 55569999998422235999988777665543210 0100 000
Q ss_pred cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCC
Q 006746 408 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 487 (632)
Q Consensus 408 ~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~ 487 (632)
....+.++- ...+.++ ++.+.++.+...+++.+.|.++
T Consensus 239 ------------~~~a~~~~~----------------------~~~~~~~-----~~~~~~~~~~~r~~l~~~L~~~--- 276 (349)
T PRK07908 239 ------------QLEAIAACC----------------------APRAVAE-----AAADAARLAADRAEMVAGLRAV--- 276 (349)
T ss_pred ------------HHHHHHHHh----------------------cccchHH-----HHHHHHHHHHHHHHHHHHHHhC---
Confidence 000000000 0011122 3556778888888899998876
Q ss_pred CCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccc
Q 006746 488 NTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREA 567 (632)
Q Consensus 488 ~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 567 (632)
| ++++.|. .+..+.+.+.+ ...+.+++.++||.++.|..+.
T Consensus 277 ---~---~~~~~p~----~g~~~~~~~~~-------~~~~~~~l~~~gI~v~~g~~f~---------------------- 317 (349)
T PRK07908 277 ---G---ARVVDPA----AAPFVLVRVPD-------AELLRKRLRERGIAVRRGDTFP---------------------- 317 (349)
T ss_pred ---C---cEeccCC----CceEEEEECCc-------HHHHHHHHHhCCEEEEECCCCC----------------------
Confidence 3 5566553 36666666543 3577778888999998763221
Q ss_pred cccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 568 KSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.+.||+|++ +.+|+++|+++|++++.+
T Consensus 318 ------------~~~~~~vRis~~---~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 318 ------------GLDPDYLRLAVR---PRAEVPVLVQALAEILKA 347 (349)
T ss_pred ------------CCCCCeEEEEeC---CCccHHHHHHHHHHHHhc
Confidence 112469999984 899999999999998765
No 113
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.74 E-value=5.7e-16 Score=168.65 Aligned_cols=167 Identities=14% Similarity=0.200 Sum_probs=124.4
Q ss_pred HHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ | ++++ .|++|+|+|+|+.+++.++ .++|++|++. ..|.+ . ...++..|++++.++
T Consensus 74 ~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~g~~Vlv~~p~y~~-~----~~~~~~~g~~~~~v~ 145 (391)
T PRK08361 74 ELREAIAEYYKKFYGVDVDVD--NVIVTAGAYEATYLAFESL-LEEGDEVIIPDPAFVC-Y----VEDAKIAEAKPIRIP 145 (391)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc-c----HHHHHHcCCEEEEEe
Confidence 5677777765 4 5554 7999999999999999998 7899997754 35543 2 234566899999999
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
++.. +..++++++++.++++ ++++++++.+|+||..+| ++ |+++|+++++++++|.+..- +....
T Consensus 146 ~~~~~~~~~d~~~l~~~i~~~------~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 219 (391)
T PRK08361 146 LREENEFQPDPDELLELITKR------TRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHY 219 (391)
T ss_pred cCCccCCCCCHHHHHHhcccc------cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCC
Confidence 8733 3468999999988764 488999999999999999 66 78889999999999986421 11101
Q ss_pred C-CCCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 318 S-FGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 318 ~-ldls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
+ +.+ ....++++.|+.|.||. .| +|++++.++.++.+
T Consensus 220 ~~~~~-~~~~~i~~~s~SK~~~~--~GlRiG~~~~~~~~~~~~ 259 (391)
T PRK08361 220 PMIKY-APDNTILANSFSKTFAM--TGWRLGFVIAPEQVIKDM 259 (391)
T ss_pred CHhhc-CCCCEEEEecCchhcCC--cHhhhhhhccCHHHHHHH
Confidence 1 111 12457999999999994 48 89999877665433
No 114
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.73 E-value=7.2e-17 Score=169.16 Aligned_cols=169 Identities=12% Similarity=0.051 Sum_probs=132.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
...++++++++++++|++. .+++|+|+|+|+..++.++ .++||+|++. ..|.+ .... .+..|+++++++.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~---~~~~~~Gst~a~~~~l~al-~~~gd~Vlv~~~~h~s-~~~~----~~~~g~~~~~v~~ 128 (294)
T cd00615 58 TGPIKEAQELAARAFGAKH---TFFLVNGTSSSNKAVILAV-CGPGDKILIDRNCHKS-VING----LVLSGAVPVYLKP 128 (294)
T ss_pred ChHHHHHHHHHHHHhCCCC---EEEEcCcHHHHHHHHHHHc-CCCCCEEEEeCCchHH-HHHH----HHHCCCEEEEecC
Confidence 4678899999999999852 5666999999999999998 7899998765 46665 2333 3457999999977
Q ss_pred cCCc-----cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC---CCCC
Q 006746 248 SWPR-----LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK---DMDS 318 (632)
Q Consensus 248 ~~~~-----~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~---~m~~ 318 (632)
++.. +.++++++++++.++ ++++++++++. |.+|..+|++ |+++||++|++++||+++.+.. ...+
T Consensus 129 ~~~~~~~~~~~i~~~~l~~~l~~~----~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~ 203 (294)
T cd00615 129 ERNPYYGIAGGIPPETFKKALIEH----PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILP 203 (294)
T ss_pred ccCcccCcCCCCCHHHHHHHHHhC----CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccC
Confidence 5332 368999999999753 24688888875 7899999999 9999999999999999986521 1124
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCC
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
.+...+++|+++.|+||+++. |++.|+|+++++
T Consensus 204 ~~~~~~~~div~~S~hK~l~g-~~~~~~l~~~~~ 236 (294)
T cd00615 204 SSAAMAGADIVVQSTHKTLPA-LTQGSMIHVKGD 236 (294)
T ss_pred cchhhcCCcEEEEchhcccch-HhHHHHHHhCCC
Confidence 445567899999999997765 778888888765
No 115
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=2.1e-15 Score=166.10 Aligned_cols=161 Identities=11% Similarity=0.163 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
......+++|+++.|+. ..++++|+++|+.+++.++ +++||+|++. ..|++ ....+...+++.|++++.++.+
T Consensus 63 p~~~~le~~lA~l~g~~----~al~~~SG~~Ai~~al~al-l~pGd~VIv~~~~y~~-t~~~~~~~~~~~G~~v~~vd~~ 136 (427)
T PRK05994 63 PTNAVLEERVAALEGGT----AALAVASGHAAQFLVFHTL-LQPGDEFIAARKLYGG-SINQFGHAFKSFGWQVRWADAD 136 (427)
T ss_pred ccHHHHHHHHHHHhCCC----cEEEEcCHHHHHHHHHHHH-hCCCCEEEEecCcchh-HHHHHHHHHHhcCcEEEEECCC
Confidence 34567889999999985 2677899999999999998 8899997754 56665 3333445567889999988652
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
+.++++++|+++ ++++.+.+.+|++|...|++ |+++|+++|+++++|.+++.|....++ .+++|
T Consensus 137 ------d~~~l~~ai~~~------tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl---~~gaD 201 (427)
T PRK05994 137 ------DPASFERAITPR------TKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPI---EHGAD 201 (427)
T ss_pred ------CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCCcc---ccCCc
Confidence 678899888764 48999999999999999999 999999999999999999887633344 46999
Q ss_pred EEEEccccccCCCCCc-eEEEEEeCC
Q 006746 328 FLICSFYQIFGENPSG-FGCLFVKKS 352 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G-~G~L~Vr~~ 352 (632)
+++.|+||++|. +.| +|.+++...
T Consensus 202 ivv~S~tK~lgg-~~~~~gG~v~~~~ 226 (427)
T PRK05994 202 IVVHSLTKFLGG-HGNSMGGIIVDGG 226 (427)
T ss_pred EEEEcCccccCC-CCCcEEEEEEeCC
Confidence 999999998884 433 788888543
No 116
>PRK04311 selenocysteine synthase; Provisional
Probab=99.73 E-value=2.5e-15 Score=166.25 Aligned_cols=212 Identities=15% Similarity=0.188 Sum_probs=153.9
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
.+.+|+++.|.+++|+.+++++..++.. |+ |+.... ..+..+..++.+++.+++++|+.
T Consensus 85 tg~v~~tNlg~s~l~~~v~eav~~~~~~--------~~------------~le~~l-~~g~~g~r~~~~e~~lA~l~Gae 143 (464)
T PRK04311 85 TGVVLHTNLGRALLSEAAIEAVTEAARG--------YS------------NLEYDL-ATGKRGSRDRALAALLCALTGAE 143 (464)
T ss_pred CccEEeccCCCCCCCHHHHHHHHHHHhc--------cc------------ccccch-hhcccchHHHHHHHHHHHHhCCC
Confidence 4678999999999999999998765421 11 111000 01123466789999999999985
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccc--hhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHH
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYES--EAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s--~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
..++++|++.|+.+++.++ .+|++|+++. ++.. .+.. +.+..++.|+++++++.+ ...++++++++|
T Consensus 144 ----~a~vv~sgtaAl~l~l~~l--~~GdeVIvs~~e~~~~ggs~~-i~~~~~~~G~~l~~v~~~---~~t~~~dle~aI 213 (464)
T PRK04311 144 ----DALVVNNNAAAVLLALNAL--AAGKEVIVSRGELVEIGGAFR-IPDVMRQAGARLVEVGTT---NRTHLRDYEQAI 213 (464)
T ss_pred ----eEEEECCHHHHHHHHHHHh--CCCCEEEEcchhhhhcCcchh-hHHHHHHCCcEEEEECCC---CCCCHHHHHHhc
Confidence 3567788889999998775 7899977654 4441 1222 234457789999988753 235789999999
Q ss_pred HhcCcCCCceeEEEEeccCCC--Cc--cccchH-HHHHHhhCCcEEEEeccccC---------CCCCCC--CCCCCCCCc
Q 006746 264 VSKGKKKKQRGLFVFPLHSRM--TG--ARYPYL-WMRIAQENDWHILIDACALG---------PKDMDS--FGLSLVRPD 327 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~--TG--~~~pl~-i~~~a~~~g~~vlvDaaq~~---------g~~m~~--ldls~~~~D 327 (632)
+++| +++.+.|.+|+ +| ...|++ |+++||++|+++++|+++.. +. .+ .+.-++++|
T Consensus 214 ~~~T------klV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~--~p~~~~~l~~GaD 285 (464)
T PRK04311 214 NENT------ALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD--EPTVQELLAAGVD 285 (464)
T ss_pred CccC------eEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC--CCchhhHHhcCCc
Confidence 8754 89999999997 45 568999 99999999999999985311 11 12 112237899
Q ss_pred EEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
++++|+||++|. | ..|+++.+++.++.++.
T Consensus 286 iv~fSg~K~LgG-p-~~G~i~g~~~li~~l~~ 315 (464)
T PRK04311 286 LVTFSGDKLLGG-P-QAGIIVGKKELIARLKK 315 (464)
T ss_pred EEEecCcccccC-C-ceEEEEEcHHHHHHHhh
Confidence 999999998874 6 68999999988876653
No 117
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.73 E-value=9.1e-16 Score=166.87 Aligned_cols=169 Identities=15% Similarity=0.160 Sum_probs=124.1
Q ss_pred HHHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|++++ +++++ .|++|+|+++|+.+++.++ .++|++|++. ..|.. ....++..|++++.+
T Consensus 71 ~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~y~~-----~~~~~~~~g~~~~~~ 142 (393)
T PRK05764 71 PELREAIAAKLKRDNGLDYDPS--QVIVTTGAKQALYNAFMAL-LDPGDEVIIPAPYWVS-----YPEMVKLAGGVPVFV 142 (393)
T ss_pred HHHHHHHHHHHHHHhCCCCCHH--HEEEeCCcHHHHHHHHHHh-cCCCCEEEecCCCCcc-----hHHHHHHcCCEEEEE
Confidence 46777777776 34544 7999999999999999998 7889997654 34442 234457789999999
Q ss_pred eccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CC--
Q 006746 246 EFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PK-- 314 (632)
Q Consensus 246 ~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~-- 314 (632)
+.++. ...+++++++++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.+... +.
T Consensus 143 ~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 216 (393)
T PRK05764 143 PTGEENGFKLTVEQLEAAITPK------TKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEF 216 (393)
T ss_pred ecCcccCCcCCHHHHHHhhCcc------ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCc
Confidence 98632 3467899999988653 488999999999999987 55 78889999999999986432 11
Q ss_pred -CCCCCCCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 315 -DMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 315 -~m~~ldls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
.+..+.....+.++++.|+-|.+|. .| +|+++.+++.++.+
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~SK~~~~--~G~RiG~i~~~~~~~~~~ 260 (393)
T PRK05764 217 TSIASLSPELRDRTITVNGFSKAYAM--TGWRLGYAAGPKELIKAM 260 (393)
T ss_pred ccHHHcCCCCcCCEEEEecCcccccC--ccceeEEEecCHHHHHHH
Confidence 0112222334568999999999994 47 68888766655443
No 118
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=5.4e-16 Score=169.29 Aligned_cols=154 Identities=10% Similarity=0.087 Sum_probs=121.1
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+......+++.++++++++|++ ..+.++|+++|+.+++.++ +++||+|++. ..|.+ ....+...+++.|+++
T Consensus 58 y~r~~~p~~~~le~~lA~l~g~~----~~i~~ssG~~Ai~~~l~al-l~~GD~Vi~~~~~y~~-~~~~~~~~~~~~Gi~v 131 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEGAE----AATAFSTGMAAISNTLYTF-LKPGDRVVSIKDTYGG-TNKIFTEFLPRMGVDV 131 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhCCC----eEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCchHH-HHHHHHHHHhhCCeEE
Confidence 55555667789999999999985 2455567789999998887 7899997754 45654 3333345567789998
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
..++. .++++++++|+++ +++|.+...+|+||...|++ |+++||++|+.+++|.++..+....++
T Consensus 132 ~~vd~------~d~e~l~~~i~~~------tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-- 197 (398)
T PRK08249 132 TLCET------GDHEQIEAEIAKG------CDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPL-- 197 (398)
T ss_pred EEcCC------CCHHHHHHhcCCC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCch--
Confidence 77653 4788999988764 48999999999999999999 999999999999999998876521233
Q ss_pred CCCCCcEEEEccccccC
Q 006746 322 SLVRPDFLICSFYQIFG 338 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G 338 (632)
.+++|+++.|++|++|
T Consensus 198 -~~~~Divv~S~sK~l~ 213 (398)
T PRK08249 198 -ALGADLVIHSATKFLS 213 (398)
T ss_pred -hhCCCEEeccCceecC
Confidence 3588999999999888
No 119
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.73 E-value=5.7e-16 Score=168.23 Aligned_cols=161 Identities=16% Similarity=0.166 Sum_probs=123.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
....++.+++++++.|.+ .+++|+|+++|+.+++.++ +++||+|++.. .|.+ ....+..++...|+++..++.
T Consensus 50 ~p~~~~le~~lA~l~g~~----~v~~~~gg~~Ai~~~l~al-l~~GD~Vl~~~p~y~~-~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 50 NPTRDLLQQALAELEGGA----GAVVTNTGMSAIHLVTTAL-LGPDDLLVAPHDCYGG-TYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred CchHHHHHHHHHHHhCCC----cEEEEcCHHHHHHHHHHHH-cCCCCEEEEcCCCcHH-HHHHHHHHHhhcCeEEEEECC
Confidence 344568899999999952 5899999999999999999 89999987654 5543 333334445566778776642
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
.+.++++++++++ ++++.++..+|+||...|++ |+++|+++|+++++|.++..|....++. .++
T Consensus 124 ------~d~~~l~~ai~~~------tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~---~ga 188 (382)
T TIGR02080 124 ------GDEQALRAALAQK------PKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLA---LGA 188 (382)
T ss_pred ------CCHHHHHHhcCcC------ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCchh---hCC
Confidence 3678899888764 48999999999999999999 9999999999999999987764212332 478
Q ss_pred cEEEEccccccCCCCCc--eEEEEEeC
Q 006746 327 DFLICSFYQIFGENPSG--FGCLFVKK 351 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G--~G~L~Vr~ 351 (632)
|+++.|++|+++. +.| .|++.+++
T Consensus 189 Divv~S~sK~l~G-~~~~~~G~i~~~~ 214 (382)
T TIGR02080 189 DLVLHSCTKYLNG-HSDVIAGAVIAKD 214 (382)
T ss_pred CEEEeecceeccC-CCCceeEEEEeCC
Confidence 9999999997763 556 56655544
No 120
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.73 E-value=2.4e-16 Score=171.47 Aligned_cols=163 Identities=11% Similarity=0.056 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
.++.++++++++|++ ..++++|++.|+.++..++ .++||+|++.. .|.. ....+...+++.|+++..++.
T Consensus 63 ~~~Le~~lA~l~G~~----~al~~~sG~~Ai~~~l~al-~~~Gd~Vv~~~~~y~~-~~~~~~~~~~~~gi~~~~~~~--- 133 (386)
T PRK06767 63 VKLFEERMAVLEGGE----EALAFGSGMAAISATLIGF-LKAGDHIICSNGLYGC-TYGFLEVLEEKFMITHSFCDM--- 133 (386)
T ss_pred hHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEcCCcHHH-HHHHHHHHHhhcCeEEEEeCC---
Confidence 468899999999974 2456677788999999888 78999987654 4443 344444556677888776644
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEE
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFL 329 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~ 329 (632)
.++++++++++++ ++|+.+...+|+||...|++ |.++|+++|+.+++|.++..|.. ..++ ..++|++
T Consensus 134 ---~d~~~l~~~i~~~------tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~--~~pl-~~g~Div 201 (386)
T PRK06767 134 ---ETEADIENKIRPN------TKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL--QRPL-ELGCDAV 201 (386)
T ss_pred ---CCHHHHHHhhCcC------ceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc--CCch-hcCCcEE
Confidence 3678898888764 48999999999999999999 99999999999999999876642 2223 3588999
Q ss_pred EEccccccCCCCCc--eEEEEEeCCCccc
Q 006746 330 ICSFYQIFGENPSG--FGCLFVKKSTVPI 356 (632)
Q Consensus 330 ~~S~hK~~G~~P~G--~G~L~Vr~~~~~~ 356 (632)
+.|++|++|. +.+ .|+++.+++.+..
T Consensus 202 ~~S~sK~l~g-~g~~~gG~v~~~~~~i~~ 229 (386)
T PRK06767 202 VHSATKYIGG-HGDVVAGVTICKTRALAE 229 (386)
T ss_pred EecCcceecC-CCCceeEEEEeChHHHHH
Confidence 9999998874 433 5888877766543
No 121
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=2e-15 Score=162.23 Aligned_cols=324 Identities=13% Similarity=0.098 Sum_probs=213.0
Q ss_pred CCceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
.+.++||.+... ..|..+++++...+..... ..|+. . . ..+.|+.|++++|.
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~Y~~-~-~-~~~lr~~ia~~~~~ 78 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVAL------------------------NRYPD-P-R-AAALKAALRAAMGV 78 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhcccc------------------------ccCCC-C-C-HHHHHHHHHHHhCc
Confidence 357889877766 4677888887654321000 00111 0 1 25789999999998
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
+++ ..|++|+|+++++.+++..+ ..+||+|++.. .|. .....++..|++++.++.+ +++.+++++|++.+.
T Consensus 79 ~~~-~~I~~t~G~~~~i~~~~~~~-~~~gd~vlv~~P~y~-----~~~~~~~~~g~~~~~i~~~-~~~~~d~~~l~~~~~ 150 (356)
T PRK04870 79 PAG-ADVLLGNGSDELIQLLALAC-AKPGATVLAPEPGFV-----MYRMSAKLAGLEFVGVPLT-ADFTLDLPAMLAAIA 150 (356)
T ss_pred CCC-CcEEEcCCHHHHHHHHHHHh-cCCCCEEEECCCCHH-----HHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhh
Confidence 753 37999999999999999988 58899977543 332 2345678899999999987 566799999999886
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecccc-CCC-CCCCCCCCCCCCcEEEEccccccCCCC
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACAL-GPK-DMDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~-~g~-~m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
+. +++++.+++.+|+||..+|.+ +.++++..+.++++|.+.. ... ...+ .+....--+++.|+.| +|.
T Consensus 151 ~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~vi~~~S~SK-~~~-- 221 (356)
T PRK04870 151 EH-----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLP-RLARFPNLLVMRTVSK-LGL-- 221 (356)
T ss_pred cC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHH-HHhhCCCEEEEecchh-hhh--
Confidence 42 258999999999999999999 8887776688899998742 221 1001 1222333588999999 884
Q ss_pred Cc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCc
Q 006746 342 SG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKL 419 (632)
Q Consensus 342 ~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~ 419 (632)
+| +|+++..++.++.+..... .|... .+
T Consensus 222 ~GlRiG~~i~~~~~i~~~~~~~~------------~~~~~--------------~~------------------------ 251 (356)
T PRK04870 222 AGLRLGYLAGHPAWIAELDKVRP------------PYNVN--------------VL------------------------ 251 (356)
T ss_pred HHHhhhhhhCCHHHHHHHHHccC------------CCcCC--------------HH------------------------
Confidence 36 8998887766554432110 01000 00
Q ss_pred ccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEEC
Q 006746 420 EQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYG 499 (632)
Q Consensus 420 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iyg 499 (632)
..... ..+++... -++...++.+...+++.+.|.++ +.+.++
T Consensus 252 ---~q~~a------------------------~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~- 293 (356)
T PRK04870 252 ---TQATA------------------------LFALEHVD--VLDAQAAQLRAERTRLAAALAAL--------PGVTVF- 293 (356)
T ss_pred ---HHHHH------------------------HHHHhCHH--HHHHHHHHHHHHHHHHHHHHHhC--------CCcEEC-
Confidence 00000 02333221 14566677778888888888776 445543
Q ss_pred CCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccC
Q 006746 500 PKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKA 579 (632)
Q Consensus 500 p~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 579 (632)
| ..++.+.+.+. +...+.+++.++||.++.|....
T Consensus 294 ~----~~~~~~~~~~~-------~~~~~~~~l~~~gI~v~~~~~f~---------------------------------- 328 (356)
T PRK04870 294 P----SAANFILVRVP-------DAAAVFDGLKTRGVLVKNLSGMH---------------------------------- 328 (356)
T ss_pred C----CCCeEEEEECC-------CHHHHHHHHHHCCEEEEECCCCC----------------------------------
Confidence 2 23555666543 23556677788999998652110
Q ss_pred CCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 580 NLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 580 ~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
....+.||+|++ +.+|+++|+++|+++|
T Consensus 329 ~~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 329 PLLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred CCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 112469999988 7999999999998764
No 122
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.72 E-value=1.4e-15 Score=165.80 Aligned_cols=166 Identities=14% Similarity=0.100 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+++.++++++++|++. .++++|+++|+.+++.++ +++||+|++.. .|.. ....+...+...|++++.++.+
T Consensus 59 p~~~~le~~lA~l~g~~~----av~~~sG~~Ai~~~l~al-~~~Gd~Vi~~~~~y~~-t~~~~~~~~~~~G~~~~~vd~~ 132 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEA----AVATSSGMGAIAATLLTI-LKAGDHLISDECLYGC-TFALLEHALTKFGIQVDFINMA 132 (391)
T ss_pred chHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHH-hCCCCEEEEecCcchH-HHHHHHHHHhcCCeEEEEECCC
Confidence 445688999999999852 567888899999999888 78999987654 4443 3333455567789999888763
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
++++++++++++ ++++.+...+|++|...|++ |+++|+++|+++++|.++..|..-.++ ..++|
T Consensus 133 ------d~e~l~~~i~~~------tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~---~~g~D 197 (391)
T TIGR01328 133 ------IPEEVKAHIKDN------TKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPV---ALGVD 197 (391)
T ss_pred ------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCch---hcCCC
Confidence 678898888764 48999999999999999999 999999999999999998776421233 35889
Q ss_pred EEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 328 FLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
+++.|+.|++|. |.+ .|+++.+++.++.+
T Consensus 198 ivv~S~sK~lgg-~g~~~gG~v~~~~~li~~l 228 (391)
T TIGR01328 198 VVVHSATKYIGG-HGDVVAGLICGKAELLQQI 228 (391)
T ss_pred EEEccccccccC-CCCceEEEEEcCHHHHHHH
Confidence 999999999884 433 46666666554433
No 123
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=3.6e-15 Score=160.27 Aligned_cols=167 Identities=11% Similarity=0.179 Sum_probs=126.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.++++++++++ .|++|+|+++++.+++.++ +++||+|++. ..|+. ....++..|+++..++.+ +
T Consensus 67 ~~lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~~-~~~gd~v~~~~p~y~~-----~~~~~~~~g~~~~~~~~~--~ 136 (359)
T PRK03158 67 PELRTKVAKHLGVDEE--QLLFGAGLDEVIQMISRAL-LNPGTNTVMAEPTFSQ-----YRHNAIIEGAEVREVPLK--D 136 (359)
T ss_pred HHHHHHHHHHhCCCHH--HEEECCCHHHHHHHHHHHH-hCCCCEEEEcCCCHHH-----HHHHHHHcCCeEEEEecC--C
Confidence 5789999999999875 7999999999999999998 6889997754 34442 234466789999999986 4
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEeccccC----CCCCCCCC-CCC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACALG----PKDMDSFG-LSL 323 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~----g~~m~~ld-ls~ 323 (632)
+.++++++++.++++ ++++.++..+|+||..+|.+ |.++++. +|+++++|.+... +.....+. +..
T Consensus 137 ~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 210 (359)
T PRK03158 137 GGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEK 210 (359)
T ss_pred CCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHh
Confidence 568999998877653 48899999999999999999 8888876 5899999997532 11000111 112
Q ss_pred CCCcEEEEccccccCCCCCce--EEEEEeCCCcccc
Q 006746 324 VRPDFLICSFYQIFGENPSGF--GCLFVKKSTVPIL 357 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~--G~L~Vr~~~~~~L 357 (632)
.+..+++.|+-|.|| ..|+ |+++..++.++.+
T Consensus 211 ~~~vi~~~S~SK~~g--~~GlRiG~~v~~~~~~~~~ 244 (359)
T PRK03158 211 YENLIVLRTFSKAYG--LAALRVGYGIASEELIEKL 244 (359)
T ss_pred cCCEEEEEechHhhc--CcchhhehhcCCHHHHHHH
Confidence 345688899999999 4476 9988877665544
No 124
>PRK06460 hypothetical protein; Provisional
Probab=99.72 E-value=5e-16 Score=168.39 Aligned_cols=173 Identities=11% Similarity=0.099 Sum_probs=127.2
Q ss_pred cccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCC
Q 006746 162 LLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGA 240 (632)
Q Consensus 162 ~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~ 240 (632)
+.|+.......++.|+++++++|+.+ .++|+ ++++|+..++.++ +++||+|++.. .+.. ....+...++..|+
T Consensus 37 ~~y~r~~~p~~~~L~~~lA~l~g~~~---~v~~~-sG~~ai~~~l~al-~~~Gd~Vl~~~~~~~~-ty~~~~~~~~~~G~ 110 (376)
T PRK06460 37 YRYSREANPTVLELTKKIVELENAEM---GVAFS-SGMGAISTTALAL-LKPGNSVLVHRDMFGR-SYRFFTDYLKNWGV 110 (376)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCCc---EEEeC-CHHHHHHHHHHHH-hCCCCEEEEecCCcCc-HHHHHHHHHHhhCc
Confidence 44676667778899999999999953 57775 5578999999988 78999987653 2332 23334556788899
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCC
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSF 319 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~l 319 (632)
++..++.+ +.+.+++.+.+ +++++.+++.+|+||...|++ |+++|+++|+++++|.++..+....++
T Consensus 111 ~v~~~~~~------~~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l 178 (376)
T PRK06460 111 NVDASNPG------SDNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPL 178 (376)
T ss_pred EEEEECCC------CHHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChh
Confidence 99887653 12333333333 358999999999999999999 999999999999999998776432233
Q ss_pred CCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccc
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPI 356 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~ 356 (632)
.++.|+++.|++|++|. +.| .|+++.+++.++.
T Consensus 179 ---~~~~divv~S~sK~l~G-~~~~~~G~~~~~~~l~~~ 213 (376)
T PRK06460 179 ---ELGADIVVHSASKFLAG-HNDVIAGLAAGYGKLLNV 213 (376)
T ss_pred ---hcCCCEEEeecceeccC-CCCceEEEEecCHHHHHH
Confidence 24689999999998872 432 6777666554433
No 125
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=7e-16 Score=167.74 Aligned_cols=165 Identities=13% Similarity=0.083 Sum_probs=124.5
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+......+++.++++++++|++ .++.++++++|+.+++.++ +++||+|++. ..|.+ ...++.. .+..|+++
T Consensus 47 y~r~~np~~~~lE~~lA~l~g~~----~~l~~~sG~~Ai~~~l~~l-l~~GD~Vlv~~~~y~~-~~~~~~~-~~~~g~~v 119 (385)
T PRK08574 47 YSREENPTLRPLEEALAKLEGGV----DALAFNSGMAAISTLFFSL-LKAGDRVVLPMEAYGT-TLRLLKS-LEKFGVKV 119 (385)
T ss_pred EECCCCccHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHH-hCCCCEEEEcCCCchh-HHHHHHH-hhccCcEE
Confidence 44444456678999999999974 3556688999999999888 7899997755 45554 4444443 36789888
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
..+.. +.++++++|++. +++++.+...+|+||..+|++ |+++||++|+++++|.+++.|....++
T Consensus 120 ~~~~~-------d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-- 185 (385)
T PRK08574 120 VLAYP-------STEDIIEAIKEG-----RTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-- 185 (385)
T ss_pred EEECC-------CHHHHHHhcCcc-----CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh--
Confidence 77632 467888888651 248999999999999999999 999999999999999999877532343
Q ss_pred CCCCCcEEEEccccccCCCCCc-e-EEEEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG-F-GCLFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G-~-G~L~Vr~ 351 (632)
.+++|++++|++|++|. |.+ + |++++++
T Consensus 186 -~~GaDivv~S~sK~l~g-~~d~~gG~vi~~~ 215 (385)
T PRK08574 186 -RHGADFVVHSLTKYIAG-HNDVVGGVAVAWS 215 (385)
T ss_pred -hhCCcEEEeeCceeecC-CCCceeEEEEECc
Confidence 35889999999997764 543 3 4355543
No 126
>PLN02509 cystathionine beta-lyase
Probab=99.71 E-value=2e-15 Score=166.97 Aligned_cols=167 Identities=11% Similarity=0.095 Sum_probs=125.1
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+.......+...+.++++.+.. .+++++++++|+.++.. + +++||+|++. ..|.+ ....+....++.|+++
T Consensus 127 Y~r~gnpt~~aLE~~lA~leg~e----~ai~~~SG~aAi~~il~-l-l~~GD~VI~~~~~y~~-t~~ll~~~l~~~G~~v 199 (464)
T PLN02509 127 YTRSGNPTRDALESLLAKLDKAD----RAFCFTSGMAALSAVTH-L-IKNGEEIVAGDDVYGG-SDRLLSQVVPRSGVVV 199 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCC----EEEEeCcHHHHHHHHHH-H-hCCCCEEEEcCCchhh-HHHHHHHHHHHCCeEE
Confidence 44333345678889999999864 24455677888877664 4 6899998764 45543 3334445567889999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++. .+.++++++|.++ ++++.+.+.+|++|...|++ |+++|+++|++++||.++..|....++
T Consensus 200 ~~vd~------~d~e~l~~ai~~~------TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl-- 265 (464)
T PLN02509 200 KRVNT------TNLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPL-- 265 (464)
T ss_pred EEeCC------CCHHHHHHhCCcC------CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChh--
Confidence 88753 3678898888654 48999999999999999999 999999999999999998887532233
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEeCCC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVKKST 353 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~ 353 (632)
.+++|++++|++|+++. |.+ .|+++++++.
T Consensus 266 -~~gaDivv~S~tK~l~G-~gdv~gG~v~~~~~~ 297 (464)
T PLN02509 266 -ELGADIVMHSATKFIAG-HSDVMAGVLAVKGEK 297 (464)
T ss_pred -hcCCcEEEecCcccccC-CCccceeEEEeccHH
Confidence 35889999999997764 655 6777776653
No 127
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.71 E-value=2.9e-15 Score=161.16 Aligned_cols=162 Identities=7% Similarity=0.086 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
..+.|+.|+++++++++ +|++|+|+++++.+++..+ .+|+.++....+. .....++..|++++.++.+..+
T Consensus 57 ~~~lr~~ia~~~~~~~~--~i~it~Ga~~~l~~~~~~l--~~g~viv~~P~y~-----~~~~~~~~~g~~~~~v~~~~~~ 127 (356)
T PRK08056 57 YRHLHQALARHHQVPAS--WILAGNGETESIFAVVSGL--KPRRAMIVTPGFA-----EYRRALQQVGCEIRRYSLREAD 127 (356)
T ss_pred HHHHHHHHHHHhCcChh--hEEECCCHHHHHHHHHHHh--CCCCEEEeCCCcH-----HHHHHHHHcCCeEEEEeccccc
Confidence 46899999999999876 7999999999999999986 5676555433332 2345667889999999986333
Q ss_pred c-ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccc--cCCCC--CCCCCCC
Q 006746 252 L-RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACA--LGPKD--MDSFGLS 322 (632)
Q Consensus 252 ~-~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq--~~g~~--m~~ldls 322 (632)
+ .++ +++.+.+.+ +++++.+++.+|+||..+| ++ |+++|+++|+++++|.+- +.... ..++ +.
T Consensus 128 ~~~~~-~~~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~ 199 (356)
T PRK08056 128 GWQLT-DAILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ-LA 199 (356)
T ss_pred CCCcc-HHHHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH-hc
Confidence 2 333 455555543 3589999999999999999 67 889999999999999972 22110 0111 23
Q ss_pred CCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 323 LVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
..+.++++.|++|+||.+-..+|+++..
T Consensus 200 ~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 200 DNPHLWVLRSLTKFYAIPGLRLGYLVNS 227 (356)
T ss_pred cCCCEEEEEechhhccCcchhheeeecC
Confidence 3456899999999999533445777664
No 128
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.71 E-value=4.3e-16 Score=147.29 Aligned_cols=164 Identities=18% Similarity=0.142 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
++++++.++++|++++ +.++|++|+|+|+.+++.++. .++++|+ ....|++ ..| ..++..|++++.++.+.
T Consensus 2 ~~~~~~~l~~~~~~~~--~~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~--~~~--~~~~~~g~~~~~v~~~~- 73 (170)
T cd01494 2 LEELEEKLARLLQPGN--DKAVFVPSGTGANEAALLALL-GPGDEVIVDANGHGS--RYW--VAAELAGAKPVPVPVDD- 73 (170)
T ss_pred HHHHHHHHHHHcCCCC--CcEEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccce--ehh--hHHHhcCCEEEEeccCC-
Confidence 4689999999998543 378999999999999999984 5688865 4557775 232 34577899999998863
Q ss_pred ccccCH--HHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCC-CCCCCCCCCC
Q 006746 251 RLRINS--EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDM-DSFGLSLVRP 326 (632)
Q Consensus 251 ~~~i~~--~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m-~~ldls~~~~ 326 (632)
....+. +++++... ..+++++.+++.++.+|...|++ +.++|+++|+++++|+++..+... ..++....++
T Consensus 74 ~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 148 (170)
T cd01494 74 AGYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGA 148 (170)
T ss_pred CCccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccC
Confidence 322222 23333221 24679999999999999999999 999999999999999999886520 0125667789
Q ss_pred cEEEEccccccCCCCCceEEEEEe
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
|+++.|+||++| +.|.|+|++|
T Consensus 149 d~~~~s~~K~~~--~~~~G~l~~~ 170 (170)
T cd01494 149 DVVTFSLHKNLG--GEGGGVVIVK 170 (170)
T ss_pred CEEEEEcccccC--CCceEEEEeC
Confidence 999999999999 4699999986
No 129
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=6.3e-15 Score=158.19 Aligned_cols=168 Identities=8% Similarity=0.128 Sum_probs=126.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.|+++++++++ .|++|+|+++++.+++..+ +++||+|++.. .|. .....++..|++++.++.+ ++
T Consensus 62 ~~lr~~ia~~~~~~~~--~i~it~G~~~~l~~~~~~l-~~~gd~Vlv~~p~y~-----~~~~~~~~~g~~~~~v~~~-~~ 132 (351)
T PRK14807 62 EKLREELARYCSVVPT--NIFVGNGSDEIIHLIMLAF-INKGDVVIYPHPSFA-----MYSVYSKIAGAVEIPVKLK-ED 132 (351)
T ss_pred HHHHHHHHHHhCCCcc--cEEEecCHHHHHHHHHHHh-cCCCCEEEEeCCChH-----HHHHHHHHcCCeEEEeecC-CC
Confidence 5789999999999876 7999999999999999998 78999977542 332 3345567889999999987 55
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecccc--CCCCCCCCCCCCCCCcE
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACAL--GPKDMDSFGLSLVRPDF 328 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~--~g~~m~~ldls~~~~Df 328 (632)
+.++.+++++++++. +++++.++..+|+||..+|.+ +.+++++.+.++++|.+.. .+....++ +....--+
T Consensus 133 ~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~-~~~~~~vi 206 (351)
T PRK14807 133 YTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDV-INEFENLI 206 (351)
T ss_pred CCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHH-hhhCCCEE
Confidence 678999999988742 358899999999999999999 9999988788899999853 22211111 11223358
Q ss_pred EEEccccccCCCCCceEEEEEeCCCcc
Q 006746 329 LICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 329 ~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
++.|+.|.+|.+-..+|+++..++.++
T Consensus 207 ~~~S~SK~~~~~GlRiG~~v~~~~~~~ 233 (351)
T PRK14807 207 VLRTLSKAFGLAGLRVGYAVANENILK 233 (351)
T ss_pred EEecchHhcccchhceeeeecCHHHHH
Confidence 889999999953233677775555544
No 130
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=1.3e-14 Score=158.67 Aligned_cols=161 Identities=13% Similarity=0.142 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
....++.+++|+++.|++ + . ++++|+++|+.+++.++ +++||+|++. ..|.. ....+...+++.|+++..++.
T Consensus 59 ~p~~~~Le~~lA~l~g~~-~--~-v~~~sG~~Ai~~~l~al-l~pGD~Vvv~~p~Y~~-t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 59 NPTRDLLGEALAELEGGA-G--G-VITATGMGAINLVLNAL-LQPGDTLVVPHDAYGG-SWRLFNALAKKGHFALITADL 132 (405)
T ss_pred ChHHHHHHHHHHHHhCCC-c--e-EEEcCHHHHHHHHHHHH-hCCCCEEEEccCCchH-HHHHHHHHHHhcCcEEEEECC
Confidence 345567899999999984 2 4 45667789999999999 8999997764 35543 233344556677888887754
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
.+.++|+++++++ ++++.++..+|+||...|++ |+++|+++|+++++|.++..|....++. +++
T Consensus 133 ------~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~---~ga 197 (405)
T PRK08776 133 ------TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLE---FGA 197 (405)
T ss_pred ------CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCccc---ccC
Confidence 3678898888654 48999999999999999999 9999999999999999987764223443 688
Q ss_pred cEEEEccccccCCCCCc--eEEEEEeC
Q 006746 327 DFLICSFYQIFGENPSG--FGCLFVKK 351 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G--~G~L~Vr~ 351 (632)
|+++.|.+|++|. |.+ .|++++++
T Consensus 198 Divv~S~tK~l~g-~~~~~~G~vv~~~ 223 (405)
T PRK08776 198 DLVLHSTTKYING-HSDVVGGAVVARD 223 (405)
T ss_pred CEEEecCceeecC-CCCceEEEEEeCC
Confidence 9999999997764 555 46655544
No 131
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=2.3e-15 Score=163.70 Aligned_cols=165 Identities=15% Similarity=0.171 Sum_probs=125.4
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++......+..+++++++.|.. .+++++|+++|+.+++.++ +++||+|++.. .|++ ....+...+++.|+++
T Consensus 46 Y~R~~~pt~~~L~~~lA~l~g~~----~~i~~~sg~~Ai~~~l~~l-~~~GD~Vl~~~~~y~~-~~~~~~~~~~~~gi~v 119 (386)
T PRK08045 46 YSRRGNPTRDVVQRALAELEGGA----GAVLTNTGMSAIHLVTTVF-LKPGDLLVAPHDCYGG-SYRLFDSLAKRGCYRV 119 (386)
T ss_pred eeCCCCccHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCCCcHH-HHHHHHHHHhhCCeEE
Confidence 33333345568999999999963 4889999999999999987 78999987654 5553 3333345555566677
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
..++ ..+.++++++++++ ++++.++..+|+||..+|++ |.++|+++|++++||.++..|....++
T Consensus 120 ~~vd------~~d~e~l~~~l~~~------tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl-- 185 (386)
T PRK08045 120 LFVD------QGDEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPL-- 185 (386)
T ss_pred EEeC------CCCHHHHHHhcccC------CeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCch--
Confidence 7653 14788998888754 48999999999999999999 999999999999999998777532344
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEe
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVK 350 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr 350 (632)
.+++|+++.|++|++|. +.+ .|+++++
T Consensus 186 -~~gaDivv~S~tK~l~G-~~d~~~G~vi~~ 214 (386)
T PRK08045 186 -ALGADLVLHSCTKYLNG-HSDVVAGVVIAK 214 (386)
T ss_pred -hhCCCEEEeecceeccC-CCCceeEEEEeC
Confidence 35889999999997764 555 4555554
No 132
>PRK05939 hypothetical protein; Provisional
Probab=99.70 E-value=2e-15 Score=164.67 Aligned_cols=166 Identities=10% Similarity=0.106 Sum_probs=127.0
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++......+...++++++.|+.. .|+|+ +++.|+..++.++ +++||+|++. ..|++ ....+ ..+++.|+++
T Consensus 41 Y~r~g~p~~~~lE~~la~leg~~~---~v~~s-sG~~Ai~~~l~al-l~~Gd~Vv~~~~~y~~-t~~~~-~~l~~~G~~v 113 (397)
T PRK05939 41 YARQGTPTTAALEAKITKMEGGVG---TVCFA-TGMAAIAAVFLTL-LRAGDHLVSSQFLFGN-TNSLF-GTLRGLGVEV 113 (397)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCe---EEEeC-CHHHHHHHHHHHH-cCCCCEEEECCCcccc-HHHHH-HHHHhcCCEE
Confidence 343334556789999999999852 45555 5689999999888 8999997754 45654 22232 3457789999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++. .+.++|+++++++ ++++.+.+.+|+||...|++ |+++||++|+++++|+++..|. .++.
T Consensus 114 ~~v~~------~d~e~l~~~l~~~------tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~---~~~~ 178 (397)
T PRK05939 114 TMVDA------TDVQNVAAAIRPN------TRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW---LFRP 178 (397)
T ss_pred EEECC------CCHHHHHHhCCCC------CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc---ccCc
Confidence 98875 2678999988764 48999999999999999999 9999999999999999998775 4455
Q ss_pred CCCCCcEEEEccccccCCCCCceEEEEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
..+++|+++.|++|++|.+-..+|..++.+
T Consensus 179 ~~~gaDivv~S~sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 179 KDVGASLVINSLSKYIAGHGNALGGAVTDT 208 (397)
T ss_pred cccCCEEEEecCeecccCCCCeEEEEEecC
Confidence 556899999999998874222346655543
No 133
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=4e-15 Score=161.78 Aligned_cols=147 Identities=16% Similarity=0.157 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
....|++|+++.++. .+++++|+++|+..++.++ +++||+|++. ..|.+ ...-+....++.|+++..++.+
T Consensus 63 ~~~Le~~iA~le~~~----~~~~~~sG~~Ai~~~l~al-l~~GD~Vvv~~~~Y~~-t~~l~~~~l~~~Gi~v~~v~~~-- 134 (394)
T PRK09028 63 HFAFQAAIVELEGGA----GTALYPSGAAAISNALLSF-LKAGDHLLMVDSCYEP-TRDLCDKILKGFGIETTYYDPM-- 134 (394)
T ss_pred HHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEECCCcHH-HHHHHHHhhhhcceEEEEECCC--
Confidence 347889999998763 5889999999999999998 8999997754 45544 2322334456789998877542
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEE
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFL 329 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~ 329 (632)
+.++++++++++ ++++.+.+.+|+||.+.|++ |+++||++|++++||.++..|....|+ ++++|++
T Consensus 135 ----~~e~l~~~l~~~------TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl---~~GaDiv 201 (394)
T PRK09028 135 ----IGEGIRELIRPN------TKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPF---EMGVDIS 201 (394)
T ss_pred ----CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCcc---ccCceEE
Confidence 346788887654 48999999999999999999 999999999999999999888533455 4699999
Q ss_pred EEccccccCC
Q 006746 330 ICSFYQIFGE 339 (632)
Q Consensus 330 ~~S~hK~~G~ 339 (632)
+.|.||+++.
T Consensus 202 v~S~tK~l~G 211 (394)
T PRK09028 202 IQAATKYIVG 211 (394)
T ss_pred EEeCCeEecC
Confidence 9999997763
No 134
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.70 E-value=3.5e-15 Score=163.18 Aligned_cols=161 Identities=11% Similarity=0.049 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
..++.+++++++.|++ ..++++|++.|+..+..++ +++||+|++.. .|.. ....+...+++.|++++.++.
T Consensus 71 ~~~~le~~lA~l~g~~----~al~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~~~~-t~~~~~~~~~~~G~~v~~vd~-- 142 (403)
T PRK07810 71 TVSMFEERLRLIEGAE----ACFATASGMSAVFTALGAL-LGAGDRLVAARSLFGS-CFVVCNEILPRWGVETVFVDG-- 142 (403)
T ss_pred hHHHHHHHHHHHhCCC----cEEEECChHHHHHHHHHHH-hCCCCEEEEccCCcch-HHHHHHHHHHHcCcEEEEECC--
Confidence 3568899999999975 4778889999999988887 78999987655 4433 344445667789999999864
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcE
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDF 328 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df 328 (632)
.++++++++|++++ +++.+...+|++|...|++ |+++||++|++++||.++..|....++ .+++|+
T Consensus 143 ----~d~~~l~~ai~~~t------klV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~---~~gaDi 209 (403)
T PRK07810 143 ----EDLSQWEEALSVPT------QAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGL---PLGADV 209 (403)
T ss_pred ----CCHHHHHHhcCcCc------eEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChh---hcCCcE
Confidence 27789999887654 8999999999999999999 999999999999999998877532243 357899
Q ss_pred EEEccccccCCCCCc---eEEEEEeCCCc
Q 006746 329 LICSFYQIFGENPSG---FGCLFVKKSTV 354 (632)
Q Consensus 329 ~~~S~hK~~G~~P~G---~G~L~Vr~~~~ 354 (632)
++.|++|++| ..| .|+++.+++.+
T Consensus 210 vv~S~tK~l~--g~g~~~gG~v~~~~~~~ 236 (403)
T PRK07810 210 VVYSGTKHID--GQGRVLGGAILGDREYI 236 (403)
T ss_pred EEccCCceec--CCcCceeEEEEeChHHH
Confidence 9999999887 335 46666665543
No 135
>PRK08960 hypothetical protein; Provisional
Probab=99.70 E-value=1e-14 Score=158.63 Aligned_cols=208 Identities=13% Similarity=0.097 Sum_probs=144.7
Q ss_pred CCceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcC-
Q 006746 107 SNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLN- 184 (632)
Q Consensus 107 ~~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~- 184 (632)
.+.++||.+..+ +.|..+++++.+.+... +.. |+.. .-..+.|+.|+++++
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~----~~~---------------------Y~~~--~g~~~lr~~ia~~~~~ 84 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAG----HTR---------------------YTAA--RGLPALREAIAGFYAQ 84 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcC----CCc---------------------cCCC--CCCHHHHHHHHHHHHH
Confidence 567999999988 46888888876644310 000 1100 112468888888873
Q ss_pred -----CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCC-ccccCHH
Q 006746 185 -----ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWP-RLRINSE 257 (632)
Q Consensus 185 -----a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~-~~~i~~~ 257 (632)
++++ +|++|+|+++|+++++..+ +.+||+|++ ..+|+. .. ..++..|++++.++++.. +..++.+
T Consensus 85 ~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~~-~~----~~~~~~g~~~~~v~~~~~~~~~~d~~ 156 (387)
T PRK08960 85 RYGVDVDPE--RILVTPGGSGALLLASSLL-VDPGKHWLLADPGYPC-NR----HFLRLVEGAAQLVPVGPDSRYQLTPA 156 (387)
T ss_pred HhCCCCChh--hEEEccCcHHHHHHHHHHh-cCCCCEEEEcCCCCcc-hH----HHHHhcCCeEEEEecCcccCCCCCHH
Confidence 5554 7999999999999999998 789999765 456664 22 234557999999998633 3468899
Q ss_pred HHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc-CCCCCCCCCCCCCCC-cEEEE
Q 006746 258 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL-GPKDMDSFGLSLVRP-DFLIC 331 (632)
Q Consensus 258 ~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~-~g~~m~~ldls~~~~-Df~~~ 331 (632)
++++++++++ +++++++.+|+||..+|.+ |+++|+++|+++++|.+-. .-.+-....+-.... -+++.
T Consensus 157 ~l~~~~~~~~------~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~ 230 (387)
T PRK08960 157 LVERHWNADT------VGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLN 230 (387)
T ss_pred HHHHHhCccc------eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEe
Confidence 9998887643 7888999999999999966 4556899999999998632 110000111111122 37889
Q ss_pred ccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 332 SFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 332 S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
|+.|.||. .| +|+++..++.++.+
T Consensus 231 S~SK~~g~--~GlRiG~~~~~~~~~~~~ 256 (387)
T PRK08960 231 SFSKYFGM--TGWRLGWLVAPPAAVPEL 256 (387)
T ss_pred ecccccCC--cccEEEEEEcCHHHHHHH
Confidence 99999994 47 89999877665444
No 136
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=3.3e-15 Score=162.71 Aligned_cols=162 Identities=11% Similarity=0.159 Sum_probs=125.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.....+.+++|+++.|++. .++| +|+++|+.++..++ +++||+|++. ..|.+ ....+....++.|+++..++.
T Consensus 60 ~p~~~~Le~~lA~~~g~~~---~i~~-~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~-t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 60 NPTRTALEEQLAALEGGAY---GRAF-SSGMAATDCLLRAV-LRPGDHIVIPNDAYGG-TFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred CccHHHHHHHHHHHhCCCc---eEEe-CCHHHHHHHHHHHH-hCCCCEEEEcCCCchH-HHHHHHHhCcCCCeEEEEeCC
Confidence 3456789999999999963 4655 56789999999999 8999997765 45553 233334445567888887754
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
.++++++++++++ ++++.+...+|+||...|++ |+++|+++|+++++|.++..+....+++ +++
T Consensus 134 ------~d~e~l~~~i~~~------tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~---~ga 198 (388)
T PRK07811 134 ------SDLDAVRAAITPR------TKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPLA---LGA 198 (388)
T ss_pred ------CCHHHHHHhcCcC------CeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCchh---hCC
Confidence 3788999888764 48999999999999999999 9999999999999999987764212443 478
Q ss_pred cEEEEccccccCCCCCc--eEEEEEeCC
Q 006746 327 DFLICSFYQIFGENPSG--FGCLFVKKS 352 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G--~G~L~Vr~~ 352 (632)
|++++|++|++|. |.+ .|+++++++
T Consensus 199 Divv~S~sK~l~g-~~~~~gG~vv~~~~ 225 (388)
T PRK07811 199 DVVVHSTTKYIGG-HSDVVGGALVTNDE 225 (388)
T ss_pred cEEEecCceeecC-CCCcEEEEEEECCH
Confidence 9999999998874 544 477777654
No 137
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=9.7e-15 Score=160.67 Aligned_cols=161 Identities=13% Similarity=0.156 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...++.+++|+++.|+. ..++++|+++|+.+++.++ +++||+|++. ..|+. ....+....+..|+++..++.
T Consensus 58 pt~~~Le~~lA~l~g~~----~~l~~ssG~~Ai~~al~al-~~~Gd~Vl~~~~~Y~~-t~~~~~~~l~~~gi~v~~~d~- 130 (425)
T PRK06084 58 PTNDVLEQRVAALEGGV----GALAVASGMAAITYAIQTI-AEAGDNIVSVAKLYGG-TYNLLAHTLPRIGIETRFAAH- 130 (425)
T ss_pred chHHHHHHHHHHHhCCC----ceeEehhHHHHHHHHHHHH-hCCCCEEEEeCCCcch-HHHHHHHhcccceeEEEEECC-
Confidence 44568899999999964 3567789999999999988 7889997754 45553 233333333446888777653
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
.++++++++|+++ ++++.+...+|+||...|++ |.++|+++|+++++|.++..|....++ .+++|
T Consensus 131 -----~d~e~le~ai~~~------tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~---~~gaD 196 (425)
T PRK06084 131 -----DDIAALEALIDER------TKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRPF---EHGAD 196 (425)
T ss_pred -----CCHHHHHHHhccC------CcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChh---hcCCC
Confidence 3788999998764 48999999999999999999 999999999999999999877532233 46899
Q ss_pred EEEEccccccCCCCCceEEEEEeC
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
+++.|++|++|.+-..+|.+++.+
T Consensus 197 ivv~S~tK~l~G~g~~~gG~v~~~ 220 (425)
T PRK06084 197 IVVHSLTKYIGGHGTSIGGIVVDS 220 (425)
T ss_pred EEEECchhcccccccceeEEEEeC
Confidence 999999998874223457777753
No 138
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.69 E-value=4.3e-15 Score=161.42 Aligned_cols=166 Identities=13% Similarity=0.077 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
...++.++++++++|++ .+++++|+++|+.+++.++ +++||+|++....+......+...+++.|++++.++.+
T Consensus 54 p~~~~le~~la~l~g~~----~~~~~~sG~~Ai~~al~al-~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~- 127 (380)
T TIGR01325 54 PTVAAFEERIAALEGAE----RAVATATGMSAIQAALMTL-LQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPT- 127 (380)
T ss_pred chHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCC-
Confidence 44678999999999984 3678899999999999888 78999987654333223444456678899999888753
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcE
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDF 328 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df 328 (632)
++++++++++++ ++++.+...+|++|...|++ |.++||++|++++||.++..+....++ .+++|+
T Consensus 128 -----d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl---~~g~Di 193 (380)
T TIGR01325 128 -----DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPL---KLGADV 193 (380)
T ss_pred -----CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch---hhCCCE
Confidence 578888887654 48999999999999999999 999999999999999998655321244 357899
Q ss_pred EEEccccccCCCCC-ce-EEEEEeCCCccc
Q 006746 329 LICSFYQIFGENPS-GF-GCLFVKKSTVPI 356 (632)
Q Consensus 329 ~~~S~hK~~G~~P~-G~-G~L~Vr~~~~~~ 356 (632)
++.|++|++|. +. .+ |+++.+++.++.
T Consensus 194 vv~S~sK~l~g-~g~~~gG~vv~~~~~~~~ 222 (380)
T TIGR01325 194 VVYSATKHIDG-QGRVMGGVIAGSEELMAE 222 (380)
T ss_pred EEeeccceecC-CCCeEEEEEEeCHHHHHH
Confidence 99999998873 32 24 555555554433
No 139
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.69 E-value=1e-14 Score=159.41 Aligned_cols=201 Identities=9% Similarity=0.046 Sum_probs=140.8
Q ss_pred hccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHH
Q 006746 100 EYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRI 179 (632)
Q Consensus 100 ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~i 179 (632)
+|+.. ...||++.+...+.+....+.+.... . + +.|+.......++.++++
T Consensus 24 ~~~~~--~~pi~~~~~~~~~~~~~~~~~~~~~~-----~------~----------------~~y~r~~~p~~~~Le~~l 74 (398)
T PRK07504 24 QFGET--SEALFLTQGFVYDTAEAAEARFKGED-----P------G----------------FIYSRYSNPTVDMFEKRM 74 (398)
T ss_pred CCCCC--cCCeECCCCccCCCHHHHHHHhccCc-----C------C----------------ceeecCCCchHHHHHHHH
Confidence 46555 56799999888776665543321100 0 0 001111123356889999
Q ss_pred HHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHH
Q 006746 180 MDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEK 258 (632)
Q Consensus 180 a~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~ 258 (632)
++++|+++ .++ +++++.|+..+..++ +++||+|++.. .|.+ ....+...+++.|++++.++ .+++++
T Consensus 75 A~l~G~~~---~~~-~~sG~~Ai~~~l~~~-l~~Gd~Vl~~~~~y~~-~~~~~~~~~~~~G~~v~~vd------~~d~e~ 142 (398)
T PRK07504 75 CALEGAED---ARA-TASGMAAVTAAILCQ-VKAGDHVVAARALFGS-CRYVVETLLPRYGIESTLVD------GLDLDN 142 (398)
T ss_pred HHHhCCCe---eeE-ecCHHHHHHHHHHHH-hCCCCEEEEcCCchhH-HHHHHHHHHhhcCeEEEEEC------CCCHHH
Confidence 99999974 344 678899998777665 68999987654 5553 22223455677899998885 267899
Q ss_pred HHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccc
Q 006746 259 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIF 337 (632)
Q Consensus 259 l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~ 337 (632)
++++|+++ +++|.+.+.+|+||...|++ |.++|+++|++++||+++..|....++ .+++|+++.|++|++
T Consensus 143 l~~ai~~~------tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~---~~gaDivv~S~sK~l 213 (398)
T PRK07504 143 WEKAVRPN------TKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPL---ELGAHIVVYSATKHI 213 (398)
T ss_pred HHHhcCcC------ceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCch---hhCCCEEEeeccccc
Confidence 99988765 48999999999999999999 999999999999999998776521233 357899999999988
Q ss_pred CCCCCceEEEEEe
Q 006746 338 GENPSGFGCLFVK 350 (632)
Q Consensus 338 G~~P~G~G~L~Vr 350 (632)
|.+...+|.+++.
T Consensus 214 ~g~g~~~GG~vv~ 226 (398)
T PRK07504 214 DGQGRCLGGVVLS 226 (398)
T ss_pred cCCccceEEEEEe
Confidence 7421236554544
No 140
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=2.6e-15 Score=161.30 Aligned_cols=167 Identities=10% Similarity=0.170 Sum_probs=124.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC-CeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSV-KNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g-d~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
++.|+.+++++|++++ .|++|+|+++++.+++..+ .++| ++|++. ..|. .....++..|++++.++.+ +
T Consensus 60 ~~l~~~~a~~~g~~~~--~I~~~~Gs~e~i~~~~~~~-~~~g~~~vli~~P~y~-----~y~~~~~~~G~~~~~v~~~-~ 130 (351)
T PRK01688 60 KAVIENYAAYAGVKPE--QVLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYG-----MYSVSAETIGVEIRTVPTL-D 130 (351)
T ss_pred HHHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCCEEEEcCCCHH-----HHHHHHHHcCCEEEEeecC-C
Confidence 4789999999999886 7999999999999999998 6776 777654 3443 2245567899999999986 4
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEecccc--CCC-CCCCCCCCCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACAL--GPK-DMDSFGLSLV 324 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~--~g~-~m~~ldls~~ 324 (632)
+..+|.+++++++ ++ ++++.++..+|+||..++.+ +.++++. .++++++|.+.. .+. .+..+ +...
T Consensus 131 ~~~~d~~~l~~~~-~~------~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~-~~~~ 202 (351)
T PRK01688 131 NWQLDLPAIADNL-DG------VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGW-LAEY 202 (351)
T ss_pred CCCCCHHHHHHhc-cC------CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHH-HhhC
Confidence 5678999998877 33 48999999999999999987 6666542 267899999842 111 01111 1222
Q ss_pred CCcEEEEccccccCCCCCce--EEEEEeCCCccccC
Q 006746 325 RPDFLICSFYQIFGENPSGF--GCLFVKKSTVPILV 358 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G~--G~L~Vr~~~~~~L~ 358 (632)
+-=+++.||.|+||. .|+ |+++.+++.++.++
T Consensus 203 ~n~iv~rSfSK~~gl--aGlRiGy~i~~~~~i~~l~ 236 (351)
T PRK01688 203 PHLVILRTLSKAFAL--AGLRCGFTLANEEVINLLL 236 (351)
T ss_pred CCEEEEecchHhhcC--HHHHHhHHhCCHHHHHHHH
Confidence 234788999999994 475 99998887765554
No 141
>PRK08363 alanine aminotransferase; Validated
Probab=99.69 E-value=8.5e-15 Score=159.79 Aligned_cols=162 Identities=17% Similarity=0.165 Sum_probs=117.2
Q ss_pred HHHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|++++ | ++++ +|++|+|+|+|+.++..++ .++||+|++.. .|.. ....++..|++++.+
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~Vl~~~p~y~~-----~~~~~~~~g~~~v~~ 144 (398)
T PRK08363 73 PELREAIVKREKRKNGVDITPD--DVRVTAAVTEALQLIFGAL-LDPGDEILIPGPSYPP-----YTGLVKFYGGVPVEY 144 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCChh--hEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCCcc-----hHHHHHHcCCEEEEe
Confidence 36788888876 3 4544 7999999999999999998 78999987643 4442 234566789888877
Q ss_pred -eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCC
Q 006746 246 -EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDM 316 (632)
Q Consensus 246 -~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m 316 (632)
+.+..+..++.+++++.+.++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.+... +..
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~- 217 (398)
T PRK08363 145 RTIEEEGWQPDIDDIRKKITEK------TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKH- 217 (398)
T ss_pred ccccccCCcCCHHHHHhhCCcc------eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcc-
Confidence 444334468889998887653 488999999999999998 77 88899999999999997431 110
Q ss_pred CC-CCCCCCCCcEEEEccccccCCCCCceEEEEE
Q 006746 317 DS-FGLSLVRPDFLICSFYQIFGENPSGFGCLFV 349 (632)
Q Consensus 317 ~~-ldls~~~~Df~~~S~hK~~G~~P~G~G~L~V 349 (632)
.+ ..+....-=+++.|+.|.|+.+..++|++++
T Consensus 218 ~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 218 VSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred cCHHHcCcCCcEEEEecchhccCCccceEEEEEE
Confidence 01 1111111236678999998764456788887
No 142
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=1.1e-14 Score=158.27 Aligned_cols=168 Identities=9% Similarity=0.150 Sum_probs=124.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.|++++|++++ .|++|+|+++++.++...+ .++||+|++.. .|+ .....++..|+++..++.+ .+
T Consensus 89 ~~lr~~ia~~~~~~~~--~I~~t~Ga~~~i~~~~~~~-~~~gd~Vlv~~P~y~-----~y~~~~~~~g~~~~~v~~~-~~ 159 (380)
T PLN03026 89 RRLRAALAEDSGLESE--NILVGCGADELIDLLMRCV-LDPGDKIIDCPPTFG-----MYVFDAAVNGAEVIKVPRT-PD 159 (380)
T ss_pred HHHHHHHHHHhCcChh--hEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH-----HHHHHHHHcCCEEEEeecC-CC
Confidence 4799999999999876 7999999999999999988 68999977543 442 2234456789999999886 45
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC--CCCCCCCC-CCCCCCc
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG--PKDMDSFG-LSLVRPD 327 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~--g~~m~~ld-ls~~~~D 327 (632)
..+++++|++++... +++++.++..+|+||..+|.+ +.++++.. +++++|.+..- +.. ..+. +...+-.
T Consensus 160 ~~~d~~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~-~~~~~~~~~~~v 232 (380)
T PLN03026 160 FSLDVPRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQE-SRMKWVKKYDNL 232 (380)
T ss_pred CCcCHHHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCc-chHHHHHhCCCE
Confidence 678999999988321 258999999999999999999 99998764 89999997431 110 0111 2233446
Q ss_pred EEEEccccccCCCCCceEEEEEeCCCccc
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKKSTVPI 356 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~ 356 (632)
+++.|+-|.||.+.-.+|+++..++.++.
T Consensus 233 iv~~SfSK~~glaGlRiGy~~~~~~~i~~ 261 (380)
T PLN03026 233 IVLRTFSKRAGLAGLRVGYGAFPLSIIEY 261 (380)
T ss_pred EEEecchHhhcCccccceeeecCHHHHHH
Confidence 89999999999422235777766555443
No 143
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.68 E-value=3e-15 Score=164.54 Aligned_cols=161 Identities=13% Similarity=0.118 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
....++.++++++++|++ ..++++|+++|+..++.++ +++||+|++. ..|++ ....+...+++.|++++.++.
T Consensus 56 ~p~~~~le~~lA~l~g~~----~~v~~~sG~~Ai~~al~~l-~~~Gd~Vl~~~~~y~~-t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGV----AALAVASGQAAITYAILNL-AQAGDNIVSSSYLYGG-TYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred ChhHHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEECCCcHH-HHHHHHHHHHHcCcEEEEECC
Confidence 344578999999999974 4788999999999999887 7899997654 45554 344445667889999998874
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
+ ++++++++|+++ ++++.+...+|++|...|++ |+++|+++|+++++|.++..|....++ .+++
T Consensus 130 ~------d~~~l~~~l~~~------t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~~l---~~g~ 194 (418)
T TIGR01326 130 D------DPEEFEKAIDEN------TKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCRPI---DHGA 194 (418)
T ss_pred C------CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCCch---hcCC
Confidence 2 678999888764 48999999999999999999 999999999999999998776421233 3578
Q ss_pred cEEEEccccccCCCCCc--eEEEEEeCC
Q 006746 327 DFLICSFYQIFGENPSG--FGCLFVKKS 352 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G--~G~L~Vr~~ 352 (632)
|+++.|++|++| +.| +|.+++.++
T Consensus 195 Divv~S~sK~l~--g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 195 DIVVHSATKYIG--GHGTAIGGVIVDGG 220 (418)
T ss_pred eEEEECcccccc--CCccceEEEEEecc
Confidence 999999999888 435 788888654
No 144
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.68 E-value=2.8e-14 Score=154.79 Aligned_cols=169 Identities=12% Similarity=0.130 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...++..+.++++++++ .+++|+|+|+|+.+++.++.+++||+|++ ...|++. . ..+...|++++.++++
T Consensus 31 ~~~~~~e~~la~~~g~~----~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~-~----~~~~~~G~~~v~vd~d 101 (376)
T TIGR02379 31 PFSRRCETWLENRTGTK----KALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVST-A----NAFVLRGAKIVFVDIR 101 (376)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHH-H----HHHHHcCCEEEEEecC
Confidence 45678888899999884 58999999999999999988899999765 5677652 2 2335679999999998
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC--
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR-- 325 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~-- 325 (632)
..+..+|+++++++++++ +++++.. +.+|...|++ |+++|+++|+++++|++|+.+. ..+-...+
T Consensus 102 ~~~~~~d~~~le~~i~~~------tk~Iip~---~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~---~~~~~~~g~~ 169 (376)
T TIGR02379 102 PDTMNIDETLIESAITHR------TKAIVPV---HYAGVACDMDTIMALANKHQLFVIEDAAQGVMS---TYKGRALGSI 169 (376)
T ss_pred CCcCCCCHHHHHHhcCcC------ceEEEEe---CCCCCccCHHHHHHHHHHCCCEEEEECccccCC---ccCCcccCCC
Confidence 555678999999988764 4777643 4689999999 9999999999999999998874 12222222
Q ss_pred CcEEEEcccc--ccCCCCCceEEEEEe-CCCccccCCC
Q 006746 326 PDFLICSFYQ--IFGENPSGFGCLFVK-KSTVPILVDN 360 (632)
Q Consensus 326 ~Df~~~S~hK--~~G~~P~G~G~L~Vr-~~~~~~L~~~ 360 (632)
.|+.++|||+ .+...+. .|+++.+ ++..++++..
T Consensus 170 ~~~~~fSf~~~K~l~~g~~-gG~v~~~~~~~~~~~~~~ 206 (376)
T TIGR02379 170 GHLGTFSFHETKNYTSGGE-GGALLINDQAFIERAEII 206 (376)
T ss_pred CCEEEEeCCCCCcCcccCC-ceEEEECCHHHHHHHHHH
Confidence 2999999996 3331033 3655665 4555555543
No 145
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.67 E-value=3.3e-14 Score=155.33 Aligned_cols=344 Identities=13% Similarity=0.140 Sum_probs=215.3
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|+|.++ .|.-++.+++++.+.+..... +.. .+ -..+...++.++++
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~------~~~---------~~---------~~~~~~~~l~~~l~ 89 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTH------FSL---------GF---------FYNEPAVELAELLL 89 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcC------ccC---------cc---------cCCHHHHHHHHHHH
Confidence 5677999876 455677888876654422100 000 00 01356678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCCCCeEEE-eccccchhhHHHHHHHHh---------cCCEEEEEeccC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PFMSVKNLLT-VYDYESEAVEAMIRTSEK---------RGARVMSAEFSW 249 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~gd~ilt-~~d~~s~~v~~~~~~a~~---------~G~~v~~v~~~~ 249 (632)
++++.+.+ .|+|++++|+|+..++..+ .+.++++|++ ...||.....++ ..... .+.++..+|.+.
T Consensus 90 ~~~~~~~~--~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (413)
T cd00610 90 ALTPEGLD--KVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGAL-SLTGSKKYRGGFGPLLPGVLHVPYPY 166 (413)
T ss_pred HhCCCCCC--EEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHH-HhcCCccccccCCCCCCCcEEeCCCc
Confidence 99997544 7999999999999988876 3466788664 456776333332 22111 122455555531
Q ss_pred C-----ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--C
Q 006746 250 P-----RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--M 316 (632)
Q Consensus 250 ~-----~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m 316 (632)
+ ....++++|++.+.+. +.+++++++..+.+.+|...| ++ +.++|+++|+++++|.++.. +.. .
T Consensus 167 ~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~ 243 (413)
T cd00610 167 RYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM 243 (413)
T ss_pred cccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch
Confidence 1 1223678888888752 134688999999999999998 88 99999999999999998753 211 0
Q ss_pred CCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccC--CCCCCCceeecccccccccccccCCCCCCccccchh
Q 006746 317 DSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV--DNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKS 394 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~--~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 394 (632)
..++.....||++++| |.+|. +..+|+++.+++.++.+. ....+
T Consensus 244 ~~~~~~~~~~d~~t~s--K~l~~-g~~~g~~~~~~~~~~~~~~~~~~~~------------------------------- 289 (413)
T cd00610 244 FAFEHFGVEPDIVTLG--KGLGG-GLPLGAVLGREEIMDAFPAGPGLHG------------------------------- 289 (413)
T ss_pred hhHhhcCCCCCeEEEc--ccccC-ccccEEEEEcHHHHHhhccCCCCCC-------------------------------
Confidence 1222223467887665 98774 345899998887766551 10000
Q ss_pred hhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHH
Q 006746 395 KQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLI 474 (632)
Q Consensus 395 ~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~ 474 (632)
+|.. .+.....+. .++|+.+.+ +.+.+|++.+.
T Consensus 290 ------~t~~--------------~~~~~~~a~------------------------~a~l~~l~~---~~~~~~~~~~~ 322 (413)
T cd00610 290 ------GTFG--------------GNPLACAAA------------------------LAVLEVLEE---EGLLENAAELG 322 (413)
T ss_pred ------CCCC--------------cCHHHHHHH------------------------HHHHHHHHh---ccHHHHHHHHH
Confidence 0000 000111111 166777765 46778999999
Q ss_pred HHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC----ccCHHHHHHHHHhCCcEEccCccCChHHHh
Q 006746 475 NWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE----KIEPVLVQKLADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 475 ~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~----~i~~~~V~kla~~~gI~lr~G~~c~~~~~~ 550 (632)
+++++.|.++... .+.+. . ...+|+++.+.+.+..+. ......+.+.+.++||.+..+
T Consensus 323 ~~l~~~l~~~~~~----~~~~~---~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~--------- 384 (413)
T cd00610 323 EYLRERLRELAEK----HPLVG---D--VRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPS--------- 384 (413)
T ss_pred HHHHHHHHHHHhh----CCcEE---E--eecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeec---------
Confidence 9999999887211 02221 1 123688888888653110 012344445555678887633
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+...+|+++++.+|.+||+++++.|++.|
T Consensus 385 -------------------------------~~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 385 -------------------------------GGNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred -------------------------------CCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 12489999999999999999999998764
No 146
>PRK08912 hypothetical protein; Provisional
Probab=99.67 E-value=1.6e-14 Score=157.01 Aligned_cols=170 Identities=12% Similarity=0.136 Sum_probs=123.4
Q ss_pred HHHHHHHHHc----CCCCCCc-cEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMDFL----NISENDY-GMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey-~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+.|+.+++++ |.+.+.. +|++|+|+++|+.+++..+ .++||+|++.. .|+. ....++..|++++.+++
T Consensus 67 ~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~Vlv~~p~y~~-----~~~~~~~~g~~~~~~~~ 140 (387)
T PRK08912 67 ELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLAL-VEPGDEVVLFQPLYDA-----YLPLIRRAGGVPRLVRL 140 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh-----hHHHHHHcCCEEEEEec
Confidence 4566666554 5433333 7999999999999999988 68899977543 4432 23456788999999998
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMDSF 319 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~~l 319 (632)
+..+..++.+++++.+.++ ++++++++.+|+||..+| ++ |+++|+++++++++|.+... +....++
T Consensus 141 ~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 214 (387)
T PRK08912 141 EPPHWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPL 214 (387)
T ss_pred CcccCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcCh
Confidence 6445678999999988653 488899999999999998 55 67889999999999987521 1100111
Q ss_pred -CCCC-CCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 320 -GLSL-VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 320 -dls~-~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
.+.. ...++++.|+.|.||. .| +|++++.++.++.+
T Consensus 215 ~~~~~~~~~~i~~~S~SK~~g~--~GlRiG~~~~~~~~~~~l 254 (387)
T PRK08912 215 MTLPGMRERTVKIGSAGKIFSL--TGWKVGFVCAAPPLLRVL 254 (387)
T ss_pred hhCCCccCceEEEeechhhccC--cCceeEEEecCHHHHHHH
Confidence 1111 2457999999999994 47 89999877665544
No 147
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.67 E-value=2.7e-14 Score=156.15 Aligned_cols=165 Identities=14% Similarity=0.113 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
.-..+.+++|+++.|.+ .+++++|+++|+.+++.++ +++||+|++. ..|.+ ....+...++..|++++.++..
T Consensus 64 p~~~~Le~~iA~~~g~~----~~l~~~sG~~Ai~~al~~l-l~~Gd~Vl~~~~~y~~-~~~~~~~~~~~~G~~v~~vd~~ 137 (400)
T PRK06234 64 PTSTEVENKLALLEGGE----AAVVAASGMGAISSSLWSA-LKAGDHVVASDTLYGC-TFALLNHGLTRYGVEVTFVDTS 137 (400)
T ss_pred ccHHHHHHHHHHHhCCC----cEEEEcCHHHHHHHHHHHH-hCCCCEEEEecCccch-HHHHHHHHHhhCCeEEEEECCC
Confidence 34568999999999974 3677889999999888877 7899997755 45554 3434445567889999988753
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEeccccCCCCCCCCCCCCCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDACALGPKDMDSFGLSLVR 325 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaaq~~g~~m~~ldls~~~ 325 (632)
+++++++++++++ +++.+...+|+||...|++ |.++|+++ |+++++|.+...+..-.++ .++
T Consensus 138 ------d~e~l~~~i~~~t------klI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l---~~g 202 (400)
T PRK06234 138 ------NLEEVRNALKANT------KVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL---QLG 202 (400)
T ss_pred ------CHHHHHHHhccCC------eEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch---hhC
Confidence 6889999887654 8999999999999999999 99999996 9999999998776421233 347
Q ss_pred CcEEEEccccccCCCCCc---eEEEEEeCCCcccc
Q 006746 326 PDFLICSFYQIFGENPSG---FGCLFVKKSTVPIL 357 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G---~G~L~Vr~~~~~~L 357 (632)
.|+++.|++|++|. + | .|+++.+++.++.+
T Consensus 203 ~Divv~S~sK~l~g-~-g~~~gG~v~~~~~~~~~l 235 (400)
T PRK06234 203 ADVVVHSATKYLNG-H-GDVIAGFVVGKEEFINQV 235 (400)
T ss_pred CcEEEeeccccccC-C-CCceeEEEEecHHHHHHH
Confidence 89999999998873 3 4 58888877655444
No 148
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.67 E-value=3e-14 Score=155.44 Aligned_cols=322 Identities=13% Similarity=0.105 Sum_probs=190.6
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCE
Q 006746 163 LHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 163 ~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~ 241 (632)
.||.. ....+.++++++++|.+ ..++|++|.++.+ .++.++ +++||+|+++. .|.+ .... .+..+++
T Consensus 38 ~yg~~--~~~~~LE~~lA~~~g~e---~al~~~sG~~a~~-~~i~~l-~~~GD~Vl~~~~~h~s-~~~~----~~l~~~~ 105 (392)
T PLN03227 38 FYGTI--DAHLELEQCMAEFLGTE---SAILYSDGASTTS-STVAAF-AKRGDLLVVDRGVNEA-LLVG----VSLSRAN 105 (392)
T ss_pred ccCCh--HHHHHHHHHHHHHhCCC---cEEEecCcHHHHH-HHHHHh-CCCCCEEEEeccccHH-HHHH----HHHcCCe
Confidence 35544 36789999999999985 2688888877777 444446 78999988665 4443 3322 2334567
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcC-----cCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKG-----KKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~-----~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~ 315 (632)
++.++.. + .-+.+.+.+.+.+.. ...+++++|++..+.+.+|...|++ +.++|+++|+++++|-++..|..
T Consensus 106 ~~~~~~~--d-~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~ 182 (392)
T PLN03227 106 VRWFRHN--D-MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTL 182 (392)
T ss_pred EEEeCCC--C-HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECccccccc
Confidence 7666543 1 112333333443210 0123578999999999999999999 99999999999999999875531
Q ss_pred CCC--------CCCC-CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCC
Q 006746 316 MDS--------FGLS-LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 316 m~~--------ldls-~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
.. +++. ..++|++++|+.|.+| |. .|++..+++.++.++....+ .
T Consensus 183 -g~~G~g~~~~~g~~p~~~~Div~~slsk~~g--~~-gg~v~~~~~~~~~~~~~~~~-~--------------------- 236 (392)
T PLN03227 183 -GKSGRGSLEHAGLKPMVHAEIVTFSLENAFG--SV-GGMTVGSEEVVDHQRLSGSG-Y--------------------- 236 (392)
T ss_pred -CCCCCcHHHHcCCCCCCCceEEEeechhhhh--cc-CcEEecCHHHHHHHHHhCcC-c---------------------
Confidence 11 1221 2356999999999888 54 24555665554333211000 0
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 466 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I 466 (632)
.|.+ +.|.+.+.. ...+++.+.+ .+.+
T Consensus 237 -----------------~~~~------------~~~p~~~~a----------------------a~~al~~~~~--~~~~ 263 (392)
T PLN03227 237 -----------------CFSA------------SAPPFLAKA----------------------DATATAGELA--GPQL 263 (392)
T ss_pred -----------------cccC------------CCCHHHHHH----------------------HHHHHHHHhc--CHHH
Confidence 0000 000000000 0134433322 3556
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEEC--CCCCCCCCcEEEEEEccCCCCc-cC----HHHHHHHHHhCCcEEc
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYG--PKIRFDRGPALAFNVFDWKREK-IE----PVLVQKLADRENISLS 539 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iyg--p~~~~~rg~ivaFnv~~~~G~~-i~----~~~V~kla~~~gI~lr 539 (632)
.++.+.+.++|++.|.+..++. ...+-| .-.....++|+.+.+.+..... .+ ...+.+.+.++||.++
T Consensus 264 ~~~l~~~~~~l~~~L~~~~~~~-----~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~ 338 (392)
T PLN03227 264 LNRLHDSIANLYSTLTNSSHPY-----ALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVV 338 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCCcc-----ccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEE
Confidence 7788899999999998753321 001111 0011236889999885511000 00 1245555666798886
Q ss_pred cCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 540 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 540 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+-. ..+ ...+...||++++..+|.|||+++++.|++.+++
T Consensus 339 ~~~~~~~---~~~--------------------------~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 339 STGGHVK---KFL--------------------------QLVPPPCLRVVANASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred ecccccC---CcC--------------------------CCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 3111000 000 1224578999999999999999999999998765
No 149
>PLN02590 probable tyrosine decarboxylase
Probab=99.66 E-value=1.5e-13 Score=154.37 Aligned_cols=242 Identities=12% Similarity=0.081 Sum_probs=160.3
Q ss_pred hCCCCCCc--hhHHHHHHhhccCcCC-CCceEeecCCCCCCCHHHHHHHhc-CCCCCCCCCCCCCCCCcccccccccccc
Q 006746 83 AYPQYFDT--YQIDQIRAKEYYQLSL-SNHTCLDYFGIGLFSYNQLHKQES-SPSHLRPSLPSQNLDIPFFSVSYKTGNL 158 (632)
Q Consensus 83 ~~p~y~~~--~~~d~iR~~ef~~L~~-~~~vyLD~ag~gl~~~~~~~a~~~-~~~~~~~~~P~~~~~~p~f~~~~~~~n~ 158 (632)
.-|+-+.. .-++++++.-.|+... ...-|+.|--++..+.+++-.+.. .+.... ..|. ..|
T Consensus 102 ~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~-----~~~~----------~sP 166 (539)
T PLN02590 102 SAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVG-----FTWL----------TSP 166 (539)
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHhccccc-----CCcc----------cCc
Confidence 34554432 3566666543444422 345699999999888888887532 221110 0121 122
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCC-----CccEEEeCCHHHHHHHHHhhCC---CC----CC-Ce-EEE-eccc
Q 006746 159 KTQLLHGGQESGLESAMKKRIMDFLNISEN-----DYGMVFTANRTSAFKLLAESYP---FM----SV-KN-LLT-VYDY 223 (632)
Q Consensus 159 ~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~-----ey~vvft~naT~al~lv~~sl~---~~----~g-d~-ilt-~~d~ 223 (632)
...+++.++-+.+++++|.++. .-.=+||+++|+|.-+.+.... .+ .+ .+ +++ +.+-
T Consensus 167 --------a~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~a 238 (539)
T PLN02590 167 --------AATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQT 238 (539)
T ss_pred --------hhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCc
Confidence 2457888999999999999853 1246789999987644322210 11 11 12 343 3333
Q ss_pred cchhhHHHHHHHHhcCC---EEEEEeccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHh
Q 006746 224 ESEAVEAMIRTSEKRGA---RVMSAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQ 298 (632)
Q Consensus 224 ~s~~v~~~~~~a~~~G~---~v~~v~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~ 298 (632)
|+ .+...++-.|+ .++.||++. +++++++++|+++|.+.++....+-+|+-+.-+..||..=|++ |.++|+
T Consensus 239 H~----Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~ 314 (539)
T PLN02590 239 HS----SFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAK 314 (539)
T ss_pred hH----HHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHH
Confidence 43 23445666777 588899874 3578999999999987543334567889999999999999999 999999
Q ss_pred hCCcEEEEeccccCCCC----CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCC
Q 006746 299 ENDWHILIDACALGPKD----MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 299 ~~g~~vlvDaaq~~g~~----m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
++|++++||||-.+..- ...+.-..-.+|-+++++|||++. |.++|+++||+.
T Consensus 315 ~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~-p~~cg~llvr~~ 371 (539)
T PLN02590 315 KYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFA-NQTCSPLWVKDR 371 (539)
T ss_pred HhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCc-CcCEEEEEecCH
Confidence 99999999987544220 011111224679999999999887 999999999985
No 150
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.66 E-value=4.4e-14 Score=152.53 Aligned_cols=331 Identities=15% Similarity=0.097 Sum_probs=199.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+..+++..+++++++|+. .++.++|+|.||.+++.++.+++||+|++ .+.+++ .+ ......|++++.+++
T Consensus 24 g~~~~~fE~~~a~~~g~~----~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~-~~----~ai~~~G~~pv~~Di 94 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVK----YAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPA-TA----SAILWAGAEPVFVDI 94 (363)
T ss_dssp SHHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-TH-HH----HHHHHTT-EEEEE-B
T ss_pred CHHHHHHHHHHHHHhCCC----eEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchH-HH----HHHHHhccEEEEEec
Confidence 467789999999999975 58889999999999999999999999764 567664 22 334568999999999
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCC--CCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMD--SFGLSLV 324 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~--~ldls~~ 324 (632)
+..++.+|+++++++|++++ +.++++|. -|...+++ |.++|+++|+.+|-|+||+.|.... .++ .+
T Consensus 95 ~~~~~~id~~~~~~~i~~~t------~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G--~~ 163 (363)
T PF01041_consen 95 DPETLNIDPEALEKAITPKT------KAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVG--SF 163 (363)
T ss_dssp ETTTSSB-HHHHHHHHHTTE------EEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETT--SS
T ss_pred cCCcCCcCHHHHHHHhccCc------cEEEEecC---CCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEecc--CC
Confidence 98899999999999999865 78888876 78888999 9999999999999999999975211 122 22
Q ss_pred CCcEEEEccc--cccCCCCCceEEEEEeCCCc-cccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 325 RPDFLICSFY--QIFGENPSGFGCLFVKKSTV-PILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 325 ~~Df~~~S~h--K~~G~~P~G~G~L~Vr~~~~-~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
+ |+.++||| |.+.. ..-|+++++++.+ ++++....-|... .....++. +..
T Consensus 164 g-d~~~fSf~~~K~i~~--geGG~v~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~---------------------~~~ 217 (363)
T PF01041_consen 164 G-DIAIFSFHPTKIITT--GEGGAVVTNDPELAERARALRNHGRSR--DAFRRYRH---------------------ELP 217 (363)
T ss_dssp S-SEEEEESSTTSSS-S--SS-EEEEESTHHHHHHHHHHTBTTEET--SECSTTEE---------------------SSS
T ss_pred C-CceEecCCCCCCCcC--CCCeeEEecHHHHHHHhhhhhccCcCc--cccccccc---------------------ccc
Confidence 3 99999998 76652 2347777766443 3332211112210 00000000 000
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
+.+ +-...++.+. -++.++.+ ++.+.++-+.+.+++.+.|
T Consensus 218 -~g~------------n~rm~~~~AA-------------------------igl~QL~~--L~~~~~~R~~~a~~y~~~L 257 (363)
T PF01041_consen 218 -PGY------------NFRMSELQAA-------------------------IGLAQLKR--LDEIIARRRENAQRYREAL 257 (363)
T ss_dssp -S--------------B-B-BHHHHH-------------------------HHHHHHHT--HHHHHHHHHHHHHHHHHHH
T ss_pred -CCc------------ccccHHHHHH-------------------------HHHHHHHH--hhhhHHHHHHHHHHHHHHH
Confidence 000 0011122211 34444443 5777788889999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCC--cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRG--PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg--~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
..+ +.+..........+. ....+.+.+... .+...+.+.+.+.||.++... +.+-.....
T Consensus 258 ~~~--------~~~~~~~~~~~~~~~~~~~f~i~~~~~~~--~~rd~l~~~L~~~GI~~~~~~-~~pl~~~~~------- 319 (363)
T PF01041_consen 258 AGI--------PGIKPPPIPDGAERSSYYRFPIRLPDEAL--ADRDELVEALRARGIETRPHY-PKPLHRQPV------- 319 (363)
T ss_dssp TTG--------TTEEEEGCGTTTEEBCESSEEEEETCCGC--STHHHHHHHHHHTTBEEBCST-SSCGGGSGG-------
T ss_pred hcC--------CCccccccccccccccccccccccccccc--chHHHHHHHHHHCCCcccccc-cCchhhhHH-------
Confidence 987 556554433212112 233444444222 467788888888899998765 111110000
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
+...........++ ........+.+-++..-+.+||+++++.|+
T Consensus 320 ~~~~~~~~~~~~P~----ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 320 YRSYPYYAPGDLPN----AERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GTTGEEEETSSSHH----HHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHhcCccccCCCHH----HHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 00000000000000 001123589999999999999999999875
No 151
>PLN02263 serine decarboxylase
Probab=99.66 E-value=3.1e-13 Score=148.44 Aligned_cols=178 Identities=11% Similarity=0.090 Sum_probs=136.8
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEE
Q 006746 167 QESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 167 ~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
...+++.++-+.+++++|.+++++.=++|+++|+|.-....... ..+...++.+.+-|. ++ ...++-.|++++.|
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~-Sv---~KAa~llgi~~~~V 205 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY-SV---FKAARMYRMECVKV 205 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccH-HH---HHHHHhcCCcceEe
Confidence 45688899999999999998766566889999998776443321 112224445554443 23 45567789999999
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCc-----EEEEeccccC---CC--
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDW-----HILIDACALG---PK-- 314 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~-----~vlvDaaq~~---g~-- 314 (632)
|.+ +++++|.++|+++|.+++ ..+-+|+.+.-++.+|..=|++ |.++|+++|+ +++||||-.+ |.
T Consensus 206 p~d-~~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~ 281 (470)
T PLN02263 206 DTL-VSGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK 281 (470)
T ss_pred ccC-CCCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc
Confidence 998 788999999999998754 2457888899999999999999 9999999996 9999998433 21
Q ss_pred CCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCc
Q 006746 315 DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTV 354 (632)
Q Consensus 315 ~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~ 354 (632)
....+|+.. ++|-+++++|||++. |.+.|++++|+...
T Consensus 282 ~~~~~df~~-~vDSIsvD~HK~l~~-P~~cgvll~R~~~~ 319 (470)
T PLN02263 282 RAPKVTFKK-PIGSVSVSGHKFVGC-PMPCGVQITRMEHI 319 (470)
T ss_pred cccccCCCc-CccEEEECCccccCC-CcCEEEEEEehhhH
Confidence 112356654 499999999999998 99999999997654
No 152
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.66 E-value=3.1e-14 Score=154.51 Aligned_cols=170 Identities=12% Similarity=0.118 Sum_probs=121.5
Q ss_pred HHHHHHHHHc----CCCCC-CccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMDFL----NISEN-DYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~-ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+.|+.|++++ |.+.+ +..|++|+|+++++.+++..+ .++||+|++. ..|+. ....++..|+++..++.
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~~-----~~~~~~~~G~~v~~v~~ 144 (383)
T TIGR03540 71 AYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAF-VNPGDIVLVPDPGYPV-----YRIGTLFAGGEPYEMPL 144 (383)
T ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHh-CCCCCEEEEeCCCCcc-----hHHHHHhcCCEEEEEec
Confidence 5677777665 44322 225899999999999999998 6899997754 45543 23346778999999998
Q ss_pred cCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEecccc----CCCCCCC
Q 006746 248 SWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACAL----GPKDMDS 318 (632)
Q Consensus 248 ~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~----~g~~m~~ 318 (632)
+.. ...++.+++++.+.++ ++++.+++.+|+||..+|. + |+++|+++|+++++|-+.. .+....+
T Consensus 145 ~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~ 218 (383)
T TIGR03540 145 KEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPS 218 (383)
T ss_pred CcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcC
Confidence 633 3457899998887643 4889999889999999994 5 7889999999999999864 1211011
Q ss_pred C-CCC-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 319 F-GLS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 319 l-dls-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
+ .+. ..+..+++.|+-|.|| ..| +|+++..+++++.+
T Consensus 219 ~~~~~~~~~~~i~~~SfSK~~g--~~GlRiG~~i~~~~l~~~~ 259 (383)
T TIGR03540 219 FLEVDGAKDVGIEFHSLSKTYN--MTGWRIGMAVGNADLIAGL 259 (383)
T ss_pred cccCCCcccCEEEEEecccccC--CccceeeEEeCCHHHHHHH
Confidence 1 111 1234578889999999 447 89988776655433
No 153
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.66 E-value=5.3e-14 Score=152.58 Aligned_cols=337 Identities=12% Similarity=0.095 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...++..+.+++++|++ .+++|+|+|+|+.+++..+.+++||+|+++ ..|++ . ...++..|++++.++++
T Consensus 31 ~~~~~~e~~la~~~g~~----~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~-~----~~~~~~~G~~~v~~d~d 101 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSA----KVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS-T----ANAFVLRGAKIVFVDIR 101 (375)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHH-H----HHHHHHcCCEEEEEecC
Confidence 55677888899999984 589999999999998888777899997754 56654 2 33456789999999998
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
..+..++++++++++++++ +++.+.| .+|...|++ |+++|+++|+.+++|++|+.+.....-.+.. -.|
T Consensus 102 ~~~~~~d~~~le~~i~~~t------k~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~-~~~ 171 (375)
T PRK11706 102 PDTMNIDETLIEAAITPKT------RAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGT-IGH 171 (375)
T ss_pred CCcCCcCHHHHHHhcCCCC------eEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeec-CcC
Confidence 5556789999999987643 7777654 599999999 9999999999999999998875111111111 248
Q ss_pred EEEEccc--cccCCCCCce-EEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcccc
Q 006746 328 FLICSFY--QIFGENPSGF-GCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 403 (632)
Q Consensus 328 f~~~S~h--K~~G~~P~G~-G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~ 403 (632)
+-++||| |.++ + |. |++++++ +..++++.....|.... .++.... ... .. ...|+.
T Consensus 172 ~~~~Sf~~~K~l~--~-g~gG~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~---~~~-------~~--~~~g~~ 231 (375)
T PRK11706 172 IGCFSFHETKNYT--A-GEGGALLINDPALIERAEIIREKGTNRS-----QFFRGQV---DKY-------TW--VDIGSS 231 (375)
T ss_pred EEEEeCCCCcccc--c-cCCeEEEECCHHHHHHHHHHHHcCCCcc-----hhhccCC---Ccc-------ee--eecccc
Confidence 9999999 9887 5 44 4455543 33333332211121100 0000000 000 00 001111
Q ss_pred CCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Q 006746 404 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK 483 (632)
Q Consensus 404 ~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~ 483 (632)
.. ..++.+. .++..++. ++.+.++-+.+.+++.+.|..
T Consensus 232 ~~---------------~~~~~aa-------------------------~~~~ql~~--l~~~~~~R~~~~~~~~~~L~~ 269 (375)
T PRK11706 232 YL---------------PSELQAA-------------------------YLWAQLEA--ADRINQRRLALWQRYYDALAP 269 (375)
T ss_pred cC---------------cCHHHHH-------------------------HHHHHHHH--HHHHHHHHHHHHHHHHHHhcC
Confidence 11 1111111 23333433 577788888888999999887
Q ss_pred cCCCCCCCCCcEEEE-CCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhh
Q 006746 484 LQHPNTEGNALVKIY-GPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 562 (632)
Q Consensus 484 l~h~~~~G~p~v~Iy-gp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~ 562 (632)
+.+ .+.+++. .|.........+.+.+.+ + .+...+.+.+.++||.++..+....+ ........ ..
T Consensus 270 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~r~~l~~~L~~~gI~~~~~~~p~~~--~~~~~~~~--~~- 335 (375)
T PRK11706 270 LAE-----AGRIELPSIPDDCKHNAHMFYIKLRD--L--EDRSALINFLKEAGIMAVFHYIPLHS--SPAGERFG--RF- 335 (375)
T ss_pred CCc-----CCeeecCCCCCCCceeeEEEEEEECC--c--CCHHHHHHHHHHCCCCccccCCccCc--chhhHhcC--CC-
Confidence 621 1123322 121111112333344432 1 36777888888899998755321110 00000000 00
Q ss_pred hhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 563 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
...| ++. .......|.+-+|..-+.+||+++++.|++++
T Consensus 336 ~~~~-----p~a----~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 336 HGED-----RYT----TKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CCCC-----hHH----HHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 0000 000 01123478888888889999999999999875
No 154
>PRK07682 hypothetical protein; Validated
Probab=99.66 E-value=1.6e-14 Score=156.44 Aligned_cols=170 Identities=14% Similarity=0.210 Sum_probs=122.8
Q ss_pred HHHHHHHHHcC----C--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFLN----I--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l~----a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.++++++ . +++ .+|++|+|+++|+.+++.++ .++||+|++. ..|+. ....++..|+++..++
T Consensus 61 ~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~l-~~~gd~vl~~~p~y~~-----~~~~~~~~g~~~~~~~ 133 (378)
T PRK07682 61 ELRQEIAKYLKKRFAVSYDPN-DEIIVTVGASQALDVAMRAI-INPGDEVLIVEPSFVS-----YAPLVTLAGGVPVPVA 133 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCchh-----hHHHHHHcCCEEEEee
Confidence 66777777764 3 332 26999999999999999998 6899997754 35542 2344566799998888
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCC---CCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPK---DMDS 318 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~---~m~~ 318 (632)
.+.. +..++.+++++++.++ ++++.++..+|+||..+| ++ |+++|+++++++++|.+..... ...+
T Consensus 134 ~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 207 (378)
T PRK07682 134 TTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTS 207 (378)
T ss_pred cCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCC
Confidence 7532 4568999999888653 478888888999999997 55 7788999999999999754311 0001
Q ss_pred -CCCC-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccC
Q 006746 319 -FGLS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 358 (632)
Q Consensus 319 -ldls-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~ 358 (632)
..+. ...-.+++.|+.|.||. .| +|+++.++++++.+.
T Consensus 208 ~~~~~~~~~~~i~~~S~SK~~~~--~GlR~G~~~~~~~~i~~l~ 249 (378)
T PRK07682 208 FASIKGMRERTILISGFSKGFAM--TGWRLGFIAAPVYFSEAML 249 (378)
T ss_pred hhhcccccCCEEEEecCcccccC--hhhhhhhhhcCHHHHHHHH
Confidence 1111 12346899999999995 37 899998877665543
No 155
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.65 E-value=3.1e-14 Score=152.08 Aligned_cols=326 Identities=15% Similarity=0.120 Sum_probs=208.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+..+.+..+.+++++|+. ..+.++|+|.||.+++.++.+.+||+|+ +++.+.+ ..+. ....|+++++|.+
T Consensus 33 G~~v~~FE~~~ae~~G~k----~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvA-Tan~----i~~~Ga~PVFvDi 103 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVK----YAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVA-TANA----VLLVGAKPVFVDI 103 (374)
T ss_pred ChHHHHHHHHHHHHhCCC----eEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHH-HHHH----HHHcCCeEEEEec
Confidence 456678888999999997 4788999999999999988899999976 4566664 3333 3457999999999
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC-----CCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-----MDSFGL 321 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-----m~~ldl 321 (632)
|+.+..+|++.|+++|++++ |.++..|. -|...+++ |.++|+++|++|+-||||+.|.. ...++
T Consensus 104 d~~T~nid~~~ie~aIt~~t------KAIipVhl---~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G- 173 (374)
T COG0399 104 DPDTLNIDPDLIEAAITPRT------KAIIPVHL---AGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG- 173 (374)
T ss_pred CCcccCCCHHHHHHHcccCC------eEEEEehh---ccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc-
Confidence 98889999999999999865 66666665 89999999 99999999999999999999752 22333
Q ss_pred CCCCCcEEEEccc--cccCCCCCceEEEEEeCC-Cc-cccCCC-CCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 322 SLVRPDFLICSFY--QIFGENPSGFGCLFVKKS-TV-PILVDN-TSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 322 s~~~~Df~~~S~h--K~~G~~P~G~G~L~Vr~~-~~-~~L~~~-~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
|+.++||| |.++. |=|.+++-++ .+ ++++.. .. |.... ....||..
T Consensus 174 -----d~~~fSF~~~K~itt---gEGGav~tnd~ela~k~~~lr~h-G~~~~--~~~~y~~~------------------ 224 (374)
T COG0399 174 -----DIGAFSFHATKNLTT---GEGGAVVTNDEELAEKARSLRNH-GLSRD--AVFKYLHE------------------ 224 (374)
T ss_pred -----ceEEEEecCCCCccc---cCceEEEeCCHHHHHHHHHHHHh-CcCCC--ccccceee------------------
Confidence 89999999 66662 5555555443 22 222211 11 32210 00011110
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
+-|. +.++.+|++. -++.+++ -++.+.+|-+.+.++
T Consensus 225 --~~G~---------------N~rm~~iqAA-------------------------igl~QL~--~l~~~~~~R~~~a~~ 260 (374)
T COG0399 225 --ELGY---------------NYRLTEIQAA-------------------------IGLAQLE--RLDEINERRREIAQI 260 (374)
T ss_pred --eccc---------------ccCHHHHHHH-------------------------HHHHHHH--HHHHHHHHHHHHHHH
Confidence 0111 1223333322 3444444 368888888999999
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 555 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~ 555 (632)
..+.|+.+ +.+.+--+....... ......+.+. .++.+.+.+.+++.||. ++.++-|-....+
T Consensus 261 Y~~~l~~~--------~~~~~p~~~~~~~~~~~~~~i~~~~~---~~~R~~l~~~L~~~gi~--~~~~~~P~~~~~~--- 324 (374)
T COG0399 261 YAEALKGL--------PGITLPPEPDGAVHAWHLYTILVDEE---GISRDALMESLKEAGVG--AVVYFRPLHLQPA--- 324 (374)
T ss_pred HHHHhhcC--------CCccccCCCCCceeeeeeeEEEecCC---CCCHHHHHHHHHhCCCC--ceEEeeccccchh---
Confidence 99999987 333221111111111 1222223332 36778888888888888 4444444222211
Q ss_pred hhhhhhhhhcccc-ccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 556 KDNVLEKTDREAK-SKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 556 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.++.. ... ...++ ........+++=++..-|.+|++++++.|++++.
T Consensus 325 ----~~~~~-~~~~~~lp~----ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 325 ----YRQLG-YFPEGDLPN----AEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred ----hhccc-ccccCCCch----HHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 11100 000 00000 0122345899999999999999999999999874
No 156
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.65 E-value=2.8e-14 Score=155.83 Aligned_cols=169 Identities=11% Similarity=0.140 Sum_probs=123.0
Q ss_pred HHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|+++++ ++++ ..|++|+|+++|+.+++..+ .++||+|++. ..|+. ....++..|++++.++
T Consensus 73 ~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~~-~~~Gd~Vlv~~P~y~~-----~~~~~~~~G~~~~~v~ 145 (399)
T PRK07681 73 EFHEAVTEYYNNTHNVILNAD-KEVLLLMGSQDGLVHLPMVY-ANPGDIILVPDPGYTA-----YETGIQMAGATSYYMP 145 (399)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CeEEECCCcHHHHHHHHHHh-CCCCCEEEECCCCccc-----hHHHHHhcCCEEEEEe
Confidence 67788887775 4541 37999999999999999998 6899997754 34542 2345677899999999
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
.+.. ...++.+++++.+.++ ++++.++..+|+||..++ ++ |+++|+++|+++++|-+..- +....
T Consensus 146 ~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~ 219 (399)
T PRK07681 146 LKKENDFLPDLELIPEEIADK------AKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPI 219 (399)
T ss_pred cCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCC
Confidence 8733 2357899998887643 488999888999999999 55 77889999999999997541 21000
Q ss_pred C-CCCC-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 318 S-FGLS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 318 ~-ldls-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
+ +.+. ..+..+++.|+.|.||. .| +|+++..++.++.+
T Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~~~--~GlRiG~~i~~~~l~~~~ 261 (399)
T PRK07681 220 SFLSVPGAKEVGVEINSLSKSYSL--AGSRIGYMIGNEEIVRAL 261 (399)
T ss_pred ChhhCCCCcccEEEEeecccccCC--ccceeEEEecCHHHHHHH
Confidence 1 1111 12346888999999994 36 79988776665444
No 157
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.65 E-value=1e-13 Score=153.17 Aligned_cols=165 Identities=16% Similarity=0.251 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC--------CCCCCCeEEE-eccccchhhHHHHHHHHhcCC
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY--------PFMSVKNLLT-VYDYESEAVEAMIRTSEKRGA 240 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl--------~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~ 240 (632)
....+.++++++++|++ .+++|+|+|+|+.+++.++ .+++||+|++ ...|.+ .. ......|+
T Consensus 63 ~~~~~fe~~lA~~~g~~----~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a-~~----~~v~~~G~ 133 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVR----YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPT-TV----NPIIQNGL 133 (438)
T ss_pred hhHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHH-HH----HHHHHcCC
Confidence 34678899999999985 4889999999999988876 5689999765 556764 22 22345799
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCC
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSF 319 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~l 319 (632)
+++.++++..++.+|++++++++++++ +++++.|. +|...+++ |.++|+++|++|++|++|+.|.....-
T Consensus 134 ~pv~vdvd~~~~~id~~~le~~i~~~t------kaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~ 204 (438)
T PRK15407 134 VPVFVDVELPTYNIDASLLEAAVSPKT------KAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR 204 (438)
T ss_pred EEEEEecCCCcCCcCHHHHHHHcCcCC------eEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCe
Confidence 999999875577889999999987644 88888874 78889999 999999999999999999998632211
Q ss_pred CCCCCCCcEEEEccc--cccCCCCCceEEEEEeCCCcc
Q 006746 320 GLSLVRPDFLICSFY--QIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 320 dls~~~~Df~~~S~h--K~~G~~P~G~G~L~Vr~~~~~ 355 (632)
.+-.++ |+.++||| |.+.. ..| |+|+++++.+.
T Consensus 205 ~~G~~g-d~~~fSf~~~k~~~~-geG-G~l~t~d~~l~ 239 (438)
T PRK15407 205 MTGTFG-DIATLSFYPAHHITM-GEG-GAVFTNDPLLK 239 (438)
T ss_pred eeeccC-ceEEEeCCCCCCccc-cCc-eEEEECCHHHH
Confidence 122344 99999999 43332 225 88888876653
No 158
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.65 E-value=1.1e-13 Score=150.79 Aligned_cols=202 Identities=12% Similarity=0.109 Sum_probs=134.6
Q ss_pred CceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc---
Q 006746 108 NHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL--- 183 (632)
Q Consensus 108 ~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l--- 183 (632)
+.++||.+... ..|..+.+++.+...... .|+. ..-..+.|+.+++++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--------------------------~Y~~--~~g~~~lr~~ia~~~~~~ 82 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEVL--------------------------AYSH--SQGIPELREAFAKYYKKW 82 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCCc--------------------------CcCC--CCCCHHHHHHHHHHHHHh
Confidence 46889988876 357777777654321100 0110 011247888888887
Q ss_pred --CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccc--cCHHHH
Q 006746 184 --NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLR--INSEKL 259 (632)
Q Consensus 184 --~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~--i~~~~l 259 (632)
+++++ .|++|+|+|+|+.+++..+ +++||+|++..-+..+. ...++..|++++.++.+..++. .+.++|
T Consensus 83 ~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l 155 (397)
T PRK07568 83 GIDVEPD--EILITNGGSEAILFAMMAI-CDPGDEILVPEPFYANY----NGFATSAGVKIVPVTTKIEEGFHLPSKEEI 155 (397)
T ss_pred CCCCCcc--eEEEcCChHHHHHHHHHHh-cCCCCEEEEecCCCccH----HHHHHHcCCEEEEeecCcccCCCCCCHHHH
Confidence 46655 7999999999999999988 78999977654333322 2345678999999988633332 246888
Q ss_pred HHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCCC-CCCCC-CCCcEE
Q 006746 260 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMDS-FGLSL-VRPDFL 329 (632)
Q Consensus 260 ~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~~-ldls~-~~~Df~ 329 (632)
+++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.+... +....+ +.+.. ..--++
T Consensus 156 ~~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~ 229 (397)
T PRK07568 156 EKLITPK------TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVII 229 (397)
T ss_pred HHhcCcc------ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEE
Confidence 8887654 489999999999999997 56 78889999999999997431 210011 22211 112378
Q ss_pred EEccccccCCCCCceEEEEEe
Q 006746 330 ICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 330 ~~S~hK~~G~~P~G~G~L~Vr 350 (632)
+.|+.|.||.+...+|+++..
T Consensus 230 ~~S~SK~~~~~G~R~G~~~~~ 250 (397)
T PRK07568 230 IDSVSKRYSACGARIGCLISK 250 (397)
T ss_pred EecchhhccCCCcceEEEecC
Confidence 889999988432346776654
No 159
>PRK07324 transaminase; Validated
Probab=99.65 E-value=4.6e-14 Score=152.90 Aligned_cols=170 Identities=18% Similarity=0.201 Sum_probs=124.6
Q ss_pred HHHHHHHHHcC-CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 174 AMKKRIMDFLN-ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 174 ~~R~~ia~~l~-a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
+.|+.|+++++ ++++ .|++|+|+++|+.+++.++ ..+||+|++.. .|. .+...++..|++++.++.+..+
T Consensus 66 ~lr~~ia~~~~~~~~~--~vi~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~-----~~~~~~~~~g~~v~~v~~~~~~ 137 (373)
T PRK07324 66 EFKEAVASLYQNVKPE--NILQTNGATGANFLVLYAL-VEPGDHVISVYPTYQ-----QLYDIPESLGAEVDYWQLKEEN 137 (373)
T ss_pred HHHHHHHHHhcCCChh--hEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCch-----hHHHHHHHcCCEEEEEeccccc
Confidence 78999999885 5655 7999999999999999998 78999987643 232 2345667899999999987433
Q ss_pred -cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC-CCCCCCCCC-CCC
Q 006746 252 -LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG-PKDMDSFGL-SLV 324 (632)
Q Consensus 252 -~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~-g~~m~~ldl-s~~ 324 (632)
..++.++|++++.++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.+... ..+-....+ +..
T Consensus 138 ~~~~d~~~l~~~~~~~------~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~ 211 (373)
T PRK07324 138 GWLPDLDELRRLVRPN------TKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLY 211 (373)
T ss_pred CCCCCHHHHHHhCCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhcc
Confidence 347899998877654 489999999999999999 77 88999999999999987432 110001111 112
Q ss_pred CCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 325 RPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
+-.+++.|+-|.||.+.-.+|.++..++.++.+
T Consensus 212 ~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~ 244 (373)
T PRK07324 212 EKGISTNSMSKTYSLPGIRVGWIAANEEVIDIL 244 (373)
T ss_pred CCEEEEecchhhcCCccceeEEEecCHHHHHHH
Confidence 224778899999995212358888766655444
No 160
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=5.3e-14 Score=152.64 Aligned_cols=165 Identities=13% Similarity=0.106 Sum_probs=123.2
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++.......+.+++++++.|++. . ++++|++.++.++.. + +++||+|++. ..|.+ ....+.+.+++.|+++
T Consensus 44 y~r~~~p~~~~Le~~lA~l~g~~~---~-~~~~sG~aai~~~~~-~-l~~Gd~Viv~~~~y~~-~~~~~~~~~~~~G~~v 116 (377)
T PRK07671 44 YSRTGNPTRAALEELIAVLEGGHA---G-FAFGSGMAAITAVMM-L-FSSGDHVILTDDVYGG-TYRVMTKVLNRFGIEH 116 (377)
T ss_pred cCCCCChHHHHHHHHHHHHhCCCc---e-EEeCCHHHHHHHHHH-H-hCCCCEEEECCCccch-HHHHHHHHHhcCCeEE
Confidence 333344566789999999999852 3 456777888887764 3 5789997754 45554 3334455667789999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++. .+.++++++|+++ ++++.+...+|+||...|++ |.++|+++|+++++|.++..+....++
T Consensus 117 ~~v~~------~d~~~l~~ai~~~------tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~-- 182 (377)
T PRK07671 117 TFVDT------SNLEEVEEAIRPN------TKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPI-- 182 (377)
T ss_pred EEECC------CCHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCChh--
Confidence 88864 3778999988765 48999999999999999999 999999999999999997665421233
Q ss_pred CCCCCcEEEEccccccCCCCCc-e-EEEEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG-F-GCLFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G-~-G~L~Vr~ 351 (632)
.+++|+++.|++|++|. |.+ + |++++++
T Consensus 183 -~~g~Divv~S~sK~l~G-~~~~~~G~~v~~~ 212 (377)
T PRK07671 183 -SLGADIVLHSATKYLGG-HSDVVAGLVVVNS 212 (377)
T ss_pred -hhCCeEEEecCcccccC-CccceeEEEEeCc
Confidence 35789999999998875 543 3 4555544
No 161
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.65 E-value=3.3e-14 Score=154.36 Aligned_cols=165 Identities=13% Similarity=0.103 Sum_probs=124.2
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+.......+..+++++++.|+.. . ++++|++.|+.++.. + +++||+|++. ..|++ ....+...+++.|+++
T Consensus 44 y~r~~~p~~~~Le~~la~l~g~~~---a-l~~~SG~~Al~~~l~-~-l~pGd~Vi~~~~~y~~-t~~~~~~~~~~~gi~v 116 (380)
T PRK06176 44 YSRSGNPTRFALEELIADLEGGVK---G-FAFASGLAGIHAVFS-L-FQSGDHVLLGDDVYGG-TFRLFDKVLVKNGLSC 116 (380)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCC---E-EEECCHHHHHHHHHH-H-cCCCCEEEEcCCChhH-HHHHHHHHHHhcCeEE
Confidence 343334556788999999999752 4 555777889998775 3 5899998764 45654 4445556678889998
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++. .++++++++++++ ++++.+...+|+||...|++ |+++||++|+++++|.++..+....++
T Consensus 117 ~~vd~------~d~e~l~~ai~~~------t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~-- 182 (380)
T PRK06176 117 TIIDT------SDLSQIKKAIKPN------TKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPL-- 182 (380)
T ss_pred EEcCC------CCHHHHHHhcCcC------ceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCcc--
Confidence 88764 3688898888764 48999999999999999999 999999999999999998776421243
Q ss_pred CCCCCcEEEEccccccCCCCCc-eEE-EEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG-FGC-LFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G-~G~-L~Vr~ 351 (632)
.+++|++++|++|++|. |.. +|. ++.++
T Consensus 183 -~~gaDivv~S~tK~l~g-~~d~~gG~vv~~~ 212 (380)
T PRK06176 183 -LLGADIVVHSGTKYLGG-HSDVVAGLVTTNN 212 (380)
T ss_pred -ccCCCEEEecCceeccC-CccceeeEEEecH
Confidence 46899999999998874 432 444 44443
No 162
>PLN02242 methionine gamma-lyase
Probab=99.65 E-value=2.4e-14 Score=157.21 Aligned_cols=172 Identities=14% Similarity=0.107 Sum_probs=127.0
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHH-HHhcCCE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRT-SEKRGAR 241 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~-a~~~G~~ 241 (632)
|++......++.++++++++|+. .+++|+|+++|+.+++.++ +++||+|++.. .|.. ....+... .+..|++
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~~----~~l~~~sG~~Ai~~al~al-~~~GD~Vl~~~~~Y~~-~~~~~~~~~~~~~G~~ 143 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGTE----AAYCTASGMSAISSVLLQL-CSSGGHVVASNTLYGG-THALLAHFLPRKCNIT 143 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEcCCcHHH-HHHHHHHhhhhccCce
Confidence 44444456678999999999985 3568899999999999998 78999987654 3322 22222222 2347888
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG 320 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld 320 (632)
++.++. .++++++++|+++ +++++.+.+.+|+||...|++ |+++||++|+++++|.++. +. .++
T Consensus 144 ~~~~d~------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~---~~~ 208 (418)
T PLN02242 144 TTFVDI------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PM---VLS 208 (418)
T ss_pred EEEcCC------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-cc---CCC
Confidence 877654 2788999888653 258999999999999999999 9999999999999999875 33 223
Q ss_pred CCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 321 LSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
...++.|+++.|+.|.+|. +.. .|+++.+++.++.+
T Consensus 209 ~~~~g~divv~S~SK~l~g-~g~~~gG~iv~~~~li~~l 246 (418)
T PLN02242 209 PARLGADVVVHSISKFISG-GADIIAGAVCGPAELVNSM 246 (418)
T ss_pred HHHcCCcEEEEeCccccCC-CCCceEEEEEcCHHHHHHH
Confidence 3345789999999998873 322 47777666655444
No 163
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=4.3e-14 Score=153.34 Aligned_cols=162 Identities=13% Similarity=0.041 Sum_probs=123.1
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVM 243 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~ 243 (632)
|++......++..++++++.|+. ..+.+++++.|+.+++.++ +++||+|+++..+.+....++...+.+.|++++
T Consensus 58 Y~r~~~P~~~~lE~~la~leg~~----~av~~sSG~aAi~~al~al-l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~ 132 (384)
T PRK06434 58 YTRWGNPTVQAFEEKYAVLENAE----HALSFSSGMGAITSAILSL-IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVD 132 (384)
T ss_pred eeCCCChhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHHhcCcEEE
Confidence 45445566678888899999985 3567778889999999998 899999887665555567777677888999999
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS 322 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls 322 (632)
+++++.. ..++ ++. .+++++.+.+.+|+|+...|++ |+++||++| ++||+++..|..-.+++
T Consensus 133 fvd~~~~-~~~~-------l~~-----~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~-- 195 (384)
T PRK06434 133 YIDTDRL-NSLD-------FDP-----SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPLD-- 195 (384)
T ss_pred EECCCCh-hhee-------ecC-----CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCchh--
Confidence 9987621 1121 222 1368999999999999999999 999999998 57799987665323565
Q ss_pred CCCCcEEEEccccccCCCCCc-eEEEEE
Q 006746 323 LVRPDFLICSFYQIFGENPSG-FGCLFV 349 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G-~G~L~V 349 (632)
+++|++++|.+|+++. +.+ +|.+++
T Consensus 196 -~gaDivv~S~tK~i~G-~~d~~gG~vv 221 (384)
T PRK06434 196 -LGADVVIHSATKYISG-HSDVVMGVAG 221 (384)
T ss_pred -cCCCEEEeecccccCC-CCCceEEEEe
Confidence 5899999999997764 543 344444
No 164
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.64 E-value=5.8e-14 Score=152.98 Aligned_cols=174 Identities=14% Similarity=0.195 Sum_probs=123.0
Q ss_pred HHHHHHHHHHcC----CCCC-CccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEe
Q 006746 173 SAMKKRIMDFLN----ISEN-DYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 173 ~~~R~~ia~~l~----a~~~-ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.+.|+.++++++ .... +..|++|+|+|+|+.+++.++ +.+||+|++.. .|.. . ...++..|+++..++
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~-~~~gd~vl~~~p~y~~-~----~~~~~~~g~~~~~~~ 143 (391)
T PRK07309 70 LELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAI-LEPGDKVLLPAPAYPG-Y----EPIVNLVGAEIVEID 143 (391)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCcc-h----HHHHHHcCCEEEEEe
Confidence 356667777663 3211 237999999999999999998 68999977543 4432 1 334567899999998
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMDS 318 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~~ 318 (632)
.+..+..++.+++++++.+.. .+++++.+++.+|+||..++ ++ |+++|+++|+++++|.+... +. ..
T Consensus 144 ~~~~~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~ 218 (391)
T PRK07309 144 TTENDFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PH 218 (391)
T ss_pred cCCcCCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CC
Confidence 864345689999999886421 24689999988999999998 56 77888999999999998542 21 11
Q ss_pred CCCCCCCC--cEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 319 FGLSLVRP--DFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 319 ldls~~~~--Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
.++..... -+++.|+.|.||.+-..+|+++..++.++.+
T Consensus 219 ~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~ 259 (391)
T PRK07309 219 VSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQL 259 (391)
T ss_pred CCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHH
Confidence 22221222 3889999999995322378888877765443
No 165
>PRK03321 putative aminotransferase; Provisional
Probab=99.63 E-value=3.5e-14 Score=152.21 Aligned_cols=170 Identities=12% Similarity=0.201 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
..+.|+.++++++++++ .|++|+|+++++.++...+ +++||+|++.. .+.. . ...++..|++++.++.+ +
T Consensus 59 ~~~lr~~ia~~~~~~~~--~I~~~~G~~~~l~~~~~~~-~~~gd~Vli~~p~y~~--~---~~~~~~~g~~~~~v~~~-~ 129 (352)
T PRK03321 59 AVELRAALAEHLGVPPE--HVAVGCGSVALCQQLVQAT-AGPGDEVIFAWRSFEA--Y---PILVQVAGATPVQVPLT-P 129 (352)
T ss_pred HHHHHHHHHHHhCcCHH--HEEECCCHHHHHHHHHHHh-cCCCCEEEeCCCCHHH--H---HHHHHHcCCEEEEccCC-C
Confidence 35899999999998865 7999999999999999887 78999987642 2321 2 22456789999999987 4
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEeccccC----CCCCCCCCCCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACALG----PKDMDSFGLSL 323 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~----g~~m~~ldls~ 323 (632)
++.++++++++.++++ ++++.+++.+|+||..+|.+ |.++|+. +|+++++|.+... +.....+..-.
T Consensus 130 ~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 203 (352)
T PRK03321 130 DHTHDLDAMAAAITDR------TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVR 203 (352)
T ss_pred CCCCCHHHHHHhhccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHh
Confidence 5678999999988654 48999999999999999999 9999887 5899999997532 11001111111
Q ss_pred CCCc-EEEEccccccCCCCCc--eEEEEEeCCCccccC
Q 006746 324 VRPD-FLICSFYQIFGENPSG--FGCLFVKKSTVPILV 358 (632)
Q Consensus 324 ~~~D-f~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~ 358 (632)
...+ +++.|+-|.||. .| +|+++.+++.++.+.
T Consensus 204 ~~~~vi~~~S~SK~~g~--~GlRiG~~v~~~~~~~~~~ 239 (352)
T PRK03321 204 DHPNVVVLRTFSKAYGL--AGLRVGYAVGHPEVIAALR 239 (352)
T ss_pred hCCCEEEEecchHHhhh--HHHhhhhhcCCHHHHHHHH
Confidence 1223 566688899994 36 799988777665543
No 166
>PRK07337 aminotransferase; Validated
Probab=99.63 E-value=9.7e-14 Score=150.94 Aligned_cols=208 Identities=12% Similarity=0.070 Sum_probs=140.3
Q ss_pred CCceEeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc--
Q 006746 107 SNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL-- 183 (632)
Q Consensus 107 ~~~vyLD~ag~gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l-- 183 (632)
.+.++|+.+...+ .+..+.+++.+.+... . ..|+.. .-..+.|+.|++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~---------------------~~Y~~~--~g~~~lr~~ia~~~~~ 82 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRG----V---------------------TQYTSA--LGLAPLREAIAAWYAR 82 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcC----C---------------------CCCCCC--CCCHHHHHHHHHHHHH
Confidence 4578999887764 4566677665433210 0 001100 01236777777776
Q ss_pred --C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC-CccccCHH
Q 006746 184 --N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW-PRLRINSE 257 (632)
Q Consensus 184 --~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~-~~~~i~~~ 257 (632)
| ++++ .|++|+|+++|+.+++..+ .++||+|++. ..|++ . ...++..|++++.++.+. .+..++.+
T Consensus 83 ~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~-~----~~~~~~~g~~~~~~~~~~~~~~~~~~~ 154 (388)
T PRK07337 83 RFGLDVAPE--RIVVTAGASAALLLACLAL-VERGDEVLMPDPSYPC-N----RHFVAAAEGRPVLVPSGPAERFQLTAA 154 (388)
T ss_pred HhCCCCChH--hEEEecCcHHHHHHHHHHh-cCCCCEEEEeCCCchh-h----HHHHHHcCCEEEEeecCCccCCcCCHH
Confidence 4 3554 7999999999999999998 6899997654 46654 2 233456799999999863 24578999
Q ss_pred HHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEecccc-CCCCCCCCCCCCCCCcE-EEE
Q 006746 258 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACAL-GPKDMDSFGLSLVRPDF-LIC 331 (632)
Q Consensus 258 ~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~-~g~~m~~ldls~~~~Df-~~~ 331 (632)
++++.+.++ ++++++++.+|+||..++. + |+++|+++|+++++|-+-. ...+-.......+..+. ++.
T Consensus 155 ~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~ 228 (388)
T PRK07337 155 DVEAAWGER------TRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITIN 228 (388)
T ss_pred HHHhhcCcc------ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEE
Confidence 999888754 3788999999999999984 5 7788999999999997522 22110111222234454 467
Q ss_pred ccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 332 SFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 332 S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
|+.|.||. .| +|++++.++.++.+
T Consensus 229 S~SK~~~~--~G~RiG~~~~~~~l~~~l 254 (388)
T PRK07337 229 SFSKYFNM--TGWRLGWLVVPEALVGTF 254 (388)
T ss_pred echhhcCC--chhheeeeecCHHHHHHH
Confidence 99999984 36 79999876655444
No 167
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.63 E-value=7.2e-14 Score=151.74 Aligned_cols=170 Identities=12% Similarity=0.085 Sum_probs=122.2
Q ss_pred HHHHHHHHHHc----CC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL----NI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l----~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|++++ |. +++ ..|++|+|+++|+.+++..+ .++||+|++. ..|+. ....++..|++++.+
T Consensus 72 ~~lr~aia~~~~~~~g~~~~~~-~~ii~t~G~~~~i~~~~~~~-~~~gd~Vl~~~P~y~~-----~~~~~~~~g~~~~~v 144 (385)
T PRK09276 72 LEFRKAVADWYKRRFGVELDPE-TEVISLIGSKEGIAHIPLAF-VNPGDVVLVPDPGYPV-----YKIGTIFAGGEPYFM 144 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-CcEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcC-----hHHHHHHcCCEEEEE
Confidence 35677777776 44 333 25899999999999999998 6899997754 34442 233466789999999
Q ss_pred eccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccC----CCCC
Q 006746 246 EFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALG----PKDM 316 (632)
Q Consensus 246 ~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~----g~~m 316 (632)
+.+.. ...++++++++.+.++ ++++.++..+|+||..+|. + |+++|+++|+++++|-+... +...
T Consensus 145 ~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (385)
T PRK09276 145 PLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKP 218 (385)
T ss_pred ecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCC
Confidence 98643 3447888988877643 4889999889999999996 5 78889999999999998542 2110
Q ss_pred CCC-CCCC-CCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 317 DSF-GLSL-VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 317 ~~l-dls~-~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
.++ .+.. .+..+++.|+-|.|| ..| +|+++..++.++.+
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~g--~~GlRiG~~i~~~~l~~~~ 261 (385)
T PRK09276 219 PSFLEVPGAKDVGIEFHSLSKTYN--MTGWRIGFAVGNADLIAGL 261 (385)
T ss_pred CChhccCCCcCCEEEEecchhhcC--CcchhheeeeCCHHHHHHH
Confidence 111 1111 234588899999999 447 89998776665444
No 168
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.63 E-value=5.1e-14 Score=151.08 Aligned_cols=166 Identities=13% Similarity=0.149 Sum_probs=118.4
Q ss_pred HHHHHHHHHc----CCCCCCc-cEEEeCCHHHHHHHHHhhCCCCCC---CeEEEe-ccccchhhHHHHHHHHhcCCEEEE
Q 006746 174 AMKKRIMDFL----NISENDY-GMVFTANRTSAFKLLAESYPFMSV---KNLLTV-YDYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey-~vvft~naT~al~lv~~sl~~~~g---d~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
+.|+.|++++ |.+-+.. .|++|+|+++|+.++...+ ..+| |+|++. ..|+. ....++..|++++.
T Consensus 40 ~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~-~~~g~~~d~Vl~~~p~y~~-----~~~~~~~~g~~~~~ 113 (350)
T TIGR03537 40 ALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF-IDPEEDRRRVIFGTPGYPV-----YERGALFAGGEPTA 113 (350)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHH-cCCCCCCceEEEcCCCCcc-----hHHHHHhcCCEEEE
Confidence 5666666665 6433332 6999999999999999988 4565 577654 34542 23446778999999
Q ss_pred EeccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC---CCCC
Q 006746 245 AEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG---PKDM 316 (632)
Q Consensus 245 v~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~---g~~m 316 (632)
++.+. ....++++++++++.++ ++++.++..+|+||..+| ++ |+++|+++|+++++|.+..- +..
T Consensus 114 v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~- 186 (350)
T TIGR03537 114 VKLKKEDGFLLRLEKVEKSILEE------TKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP- 186 (350)
T ss_pred cccCcccCCccCHHHHHHhhhhc------cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC-
Confidence 99862 23457999999988764 489999999999999999 77 88889999999999998532 221
Q ss_pred CCCCCCCCC--CcEEEEccccccCCCCCc--eEEEEEeCCCcc
Q 006746 317 DSFGLSLVR--PDFLICSFYQIFGENPSG--FGCLFVKKSTVP 355 (632)
Q Consensus 317 ~~ldls~~~--~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~ 355 (632)
...+..+. -.+++.|+.|.+|. .| +|+++..+..++
T Consensus 187 -~~~~~~~~~~~~i~~~s~SK~~g~--~GlRiG~~~~~~~~~~ 226 (350)
T TIGR03537 187 -PHSALEVGIENVLAFHSLSKRSGM--TGYRSGFVAGDEKLIS 226 (350)
T ss_pred -CCchhhcCcCCEEEEeecccccCC--ccccceeeecCHHHHH
Confidence 11121122 24788899999984 36 787765554443
No 169
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=4.3e-14 Score=154.26 Aligned_cols=166 Identities=11% Similarity=0.037 Sum_probs=127.4
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+......+++.++++++++|++ .+++++|+|+|+.+++.++ +++||+|++. ..|.. ....+...++..|+++
T Consensus 59 Y~r~~~pt~~~Le~~lA~l~g~~----~~l~~~sgt~Ai~~~l~al-~~~GD~Vl~~~~~y~~-~~~~~~~~~~~~Gi~v 132 (394)
T PRK07050 59 YGLHATPTSLALAQRLAEIEGGR----HALLQPSGLAAISLVYFGL-VKAGDDVLIPDNAYGP-NRDHGEWLARDFGITV 132 (394)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCC----eEEEeccHHHHHHHHHHHH-hCCCCEEEEecCCccc-HHHHHHHHHHhcCeEE
Confidence 33333345578999999999974 5899999999999999999 8999998754 45554 3333344567889999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++.. +.++++++|+++ ++++.+...+|++|...|++ |+++|+++|+.+++|+++..|....+++
T Consensus 133 ~~vd~~------~~~~l~~~i~~~------tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~- 199 (394)
T PRK07050 133 RFYDPL------IGAGIADLIQPN------TRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFE- 199 (394)
T ss_pred EEECCC------CHHHHHHhcCCC------CeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHH-
Confidence 887642 346788887654 48999999999999999999 9999999999999999998876323444
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~ 351 (632)
++.|+++.|+.|+++. ..+ .|++++++
T Consensus 200 --~GaDi~v~S~tK~~~g-~~~~~gG~v~~~~ 228 (394)
T PRK07050 200 --HGVDISVQALTKYQSG-GSDVLMGATITAD 228 (394)
T ss_pred --cCCeEEEEECCceecC-CCCeeEEEEEECC
Confidence 4789999999997763 333 45555543
No 170
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.62 E-value=2.3e-13 Score=159.24 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=126.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHH----HHHhhCCCCCC----CeEEEe-ccccchhhHHHHHHHHhcC
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFK----LLAESYPFMSV----KNLLTV-YDYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~----lv~~sl~~~~g----d~ilt~-~d~~s~~v~~~~~~a~~~G 239 (632)
.+++.+..+.+++++|.+. +-+-+|+++.=+ ++++.+.-..| ++++++ .-|.+| + ..++..|
T Consensus 529 lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn--P---asa~~~G 599 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN--P---ASAAMAG 599 (939)
T ss_pred HHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC--H---HHHHHCC
Confidence 5788999999999999982 333344443222 24455421112 235544 456543 2 2366789
Q ss_pred CEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc-hH-HHHHHhhCCcEEEEeccccCCCCCC
Q 006746 240 ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP-YL-WMRIAQENDWHILIDACALGPKDMD 317 (632)
Q Consensus 240 ~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p-l~-i~~~a~~~g~~vlvDaaq~~g~~m~ 317 (632)
++|+.++.+ ++|.+|+++|+++|++. ..++++|++++.|+ +|...| ++ |+++||++|..++||+||..+.- .
T Consensus 600 ~~Vv~V~~d-~~G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~-~ 673 (939)
T TIGR00461 600 MQVVPVNCD-QDGNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV-G 673 (939)
T ss_pred CEEEEeccC-CCCCcCHHHHHHHHhhc---CCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCC-C
Confidence 999999997 78999999999999852 12479999999999 688877 99 99999999999999999977541 2
Q ss_pred CCCCCCCCCcEEEEccccccCC----CCCceEEEEEeCCCccccCCCCCC
Q 006746 318 SFGLSLVRPDFLICSFYQIFGE----NPSGFGCLFVKKSTVPILVDNTSS 363 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~----~P~G~G~L~Vr~~~~~~L~~~~~g 363 (632)
..+..++++||+++|.||.||. .|+|+|+++||+. |.+...|
T Consensus 674 l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~----L~~~lPg 719 (939)
T TIGR00461 674 LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH----LIPFLPK 719 (939)
T ss_pred CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh----chhhcCC
Confidence 3344678999999999994441 1557799999976 4444444
No 171
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.62 E-value=4.3e-13 Score=146.47 Aligned_cols=290 Identities=9% Similarity=0.064 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--------CCCC-CeEE-EeccccchhhHHHHHHH----
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--------FMSV-KNLL-TVYDYESEAVEAMIRTS---- 235 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--------~~~g-d~il-t~~d~~s~~v~~~~~~a---- 235 (632)
+...+..++++++++.+ .++|++++|+|+..++.... ..+| ++|+ ....+|......+ ...
T Consensus 83 ~~~~~l~~~l~~~~~~~----~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~-~~~~~~~ 157 (401)
T PRK00854 83 DQLAPLYEELAALTGSH----KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIV-GFSTDPD 157 (401)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHH-hccCCcc
Confidence 45567888899998753 58999999999998887652 1234 4554 5567776332221 110
Q ss_pred -----HhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEE
Q 006746 236 -----EKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHIL 305 (632)
Q Consensus 236 -----~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vl 305 (632)
...+..+..++. .|.++|++.|.++ ++++++.++.+.+|.++| ++ +.++|+++|++++
T Consensus 158 ~~~~~~~~~~~~~~~~~------~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI 225 (401)
T PRK00854 158 ARGGFGPFTPGFRVVPF------GDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLI 225 (401)
T ss_pred ccccCCCCCCCeEEeCC------CCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 001123333332 3678999888654 489999999999999998 88 9999999999999
Q ss_pred Eecccc-CCCCCCC---CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccccccccccc
Q 006746 306 IDACAL-GPKDMDS---FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEF 381 (632)
Q Consensus 306 vDaaq~-~g~~m~~---ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~ 381 (632)
+|.++. +|.. .. .+.....+|+++++ |.++..-.-+|++..+++.++.+.+...+.+ |
T Consensus 226 ~DEv~~g~g~~-g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t----------~----- 287 (401)
T PRK00854 226 LDEIQTGLGRT-GKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLGVLKPGQHGST----------F----- 287 (401)
T ss_pred EechhhCCCCC-chHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHhcccCCCCCCC----------C-----
Confidence 999987 4431 10 11223468999987 9665211127888888877665543111100 0
Q ss_pred CCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh
Q 006746 382 SSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL 461 (632)
Q Consensus 382 ~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~ 461 (632)
.+ + + ....+. .++|+.+.+.
T Consensus 288 ------------------~~-~----~-------------~~~aa~------------------------~a~L~~l~~~ 307 (401)
T PRK00854 288 ------------------GG-N----P-------------LACAVA------------------------RAALKVLTEE 307 (401)
T ss_pred ------------------Cc-C----H-------------HHHHHH------------------------HHHHHHHHHc
Confidence 00 0 0 001111 2667766543
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccC
Q 006746 462 GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYG 541 (632)
Q Consensus 462 Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G 541 (632)
.+.++.+.+.+++.+.|.++. .+.+ +. ....|.++.|.+.+.. .....+.+.+.++||.++.
T Consensus 308 ---~~~~~~~~~~~~l~~~L~~~~------~~~~---~~--~~g~g~~~~i~~~~~~---~~~~~~~~~L~~~GV~v~~- 369 (401)
T PRK00854 308 ---GMIENAAEMGAYFLEGLRSIR------SNIV---RE--VRGRGLMLAVELEPEA---GGARQYCEALKERGLLAKD- 369 (401)
T ss_pred ---CHHHHHHHHHHHHHHHHHhhc------cCce---EE--EeccceEEEEEEecCc---hhHHHHHHHHHHCCeEEec-
Confidence 356888889999999998872 2211 11 1235777777664321 2334455544456888741
Q ss_pred ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 542 SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 542 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+.+.||+++++.++.+||+++++.|++++.
T Consensus 370 ---------------------------------------~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 370 ---------------------------------------THDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred ---------------------------------------CCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 1235999999999999999999999998864
No 172
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=7.2e-14 Score=153.38 Aligned_cols=161 Identities=15% Similarity=0.138 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..++...++++++.|+. ..+.++|+++|+.++..++ +++||+|+++. .|.+ ....+....++.|+++.++.+
T Consensus 61 Ptv~~lE~~la~leg~~----~av~~~SG~aAi~~al~al-l~~GD~VI~~~~~Y~~-T~~~~~~~l~~~Gi~v~~vd~- 133 (432)
T PRK06702 61 PTLAAFEQKLAELEGGV----GAVATASGQAAIMLAVLNI-CSSGDHLLCSSTVYGG-TFNLFGVSLRKLGIDVTFFNP- 133 (432)
T ss_pred cHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHh-cCCCCEEEECCCchHH-HHHHHHHHHHHCCCEEEEECC-
Confidence 44668899999999985 3677999999999999988 79999987654 5543 333334445789999998854
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
.+|+++++++|+++| ++|.+.+.+|+++...|++ |+++|+++|+.+++|.+-..|.-..++ +.++|
T Consensus 134 ----~~d~~~l~~~I~~~T------k~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl---~~GAD 200 (432)
T PRK06702 134 ----NLTADEIVALANDKT------KLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAF---EHGAN 200 (432)
T ss_pred ----CCCHHHHHHhCCcCC------eEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhCChh---hcCCC
Confidence 268889999998765 8888999999999999999 999999999999999986555311233 45899
Q ss_pred EEEEccccccCCCCCceEEEEEe
Q 006746 328 FLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
+++-|.-|++|.+..++|.+.+.
T Consensus 201 Ivv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 201 IIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred EEEEccccccCCCcceeceEEEe
Confidence 99999999776556777877774
No 173
>PRK07550 hypothetical protein; Provisional
Probab=99.62 E-value=1.9e-13 Score=148.57 Aligned_cols=173 Identities=11% Similarity=0.080 Sum_probs=117.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccC-C
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSW-P 250 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~-~ 250 (632)
+.+.+.+.+..|...+...|++|+|+++|+.+++.++ .++||+|++.. .|.. . ...++..|++++.++.+. .
T Consensus 74 ~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~-~----~~~~~~~g~~~~~v~~~~~~ 147 (386)
T PRK07550 74 EAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTL-AGAGDEVILPLPWYFN-H----KMWLDMLGIRPVYLPCDEGP 147 (386)
T ss_pred HHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh-cCCCCEEEEcCCCCcc-h----HHHHHhcCCEEEEEecCCCc
Confidence 3344444444343322237999999999999999998 68999987653 3332 1 234567899999999863 3
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCC-C-CCCCCC-CC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPK-D-MDSFGL-SL 323 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~-~-m~~ldl-s~ 323 (632)
+..++.++++++++++ ++++++.+.+|+||..+| ++ |+++|+++|+++++|.+...-. + -.+..+ +.
T Consensus 148 ~~~~~~~~l~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~ 221 (386)
T PRK07550 148 GLLPDPAAAEALITPR------TRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFAD 221 (386)
T ss_pred CCCCCHHHHHHHhccc------CcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhC
Confidence 4557899999988754 377778888999999998 55 7888999999999999743100 0 001111 11
Q ss_pred ---CCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 324 ---VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 324 ---~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
..-.+++.|+.|.+|.+-..+|+++..++.++.+
T Consensus 222 ~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~ 258 (386)
T PRK07550 222 PDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEI 258 (386)
T ss_pred CCccccEEEEecchhhccCcccceEeeecCHHHHHHH
Confidence 1124779999998884223488888876655443
No 174
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.62 E-value=8.2e-14 Score=151.92 Aligned_cols=172 Identities=13% Similarity=0.151 Sum_probs=121.6
Q ss_pred HHHHHHHHHc----CC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----NI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ |. +++ ..|++|+|+++|+.+++..+ +++||+|++. ..|+. . ...++..|++++.++
T Consensus 77 ~lr~aia~~~~~~~~~~~~~~-~~i~vt~G~~~al~~~~~~~-~~~gd~Vlv~~P~y~~-~----~~~~~~~g~~~~~v~ 149 (394)
T PRK05942 77 SFRQAITDWYHRRYGVELDPD-SEALPLLGSKEGLTHLALAY-VNPGDVVLVPSPAYPA-H----FRGPLIAGAQIYPII 149 (394)
T ss_pred HHHHHHHHHHHHHHCCCcCCC-CeEEEccChHHHHHHHHHHh-CCCCCEEEEcCCCCcc-h----HHHHHHcCCEEEEee
Confidence 5677777776 53 343 24888999999999999998 7899997654 45553 2 223456899999999
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
.+.. +..++.+++++.+.++ ++++.++..+|+||..+| ++ |+++|+++|+++++|.+..- +....
T Consensus 150 ~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~ 223 (394)
T PRK05942 150 LKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPT 223 (394)
T ss_pred cCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCC
Confidence 8632 3358999999888654 489999889999999999 55 77889999999999997321 11001
Q ss_pred C-CCCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 318 S-FGLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 318 ~-ldls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
+ .++.. ....+++.||-|.||.+.-.+|+++..++.++.+.
T Consensus 224 ~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~ 266 (394)
T PRK05942 224 SLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLR 266 (394)
T ss_pred ChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHH
Confidence 1 11111 12357788999999853233899988776655443
No 175
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=6.9e-14 Score=151.96 Aligned_cols=168 Identities=11% Similarity=0.046 Sum_probs=125.6
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++......+..+++|+.+-+.. ..++++++++|+..++.++ +++||+|+.. ..|++ ....+.+.+++.|++|
T Consensus 58 YsR~gnPt~~~Le~~la~le~~~----~~v~~sSG~aAi~~~l~al-l~~GD~Vlv~~~~Y~~-~~~l~~~~l~~~Gi~v 131 (395)
T PRK05967 58 YGTRGTPTTDALCKAIDALEGSA----GTILVPSGLAAVTVPFLGF-LSPGDHALIVDSVYYP-TRHFCDTMLKRLGVEV 131 (395)
T ss_pred cCCCCChHHHHHHHHHHHHhCCC----CEEEECcHHHHHHHHHHHh-cCCCCEEEEccCCcHH-HHHHHHHHHHhcCeEE
Confidence 44333455567888888776653 2456667999999999998 8999997754 45554 3334456778899999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
..++.+ +.++++++|+++ ++||.+...+|+++.+.|++ |+++||++|++++||.++..|....+++
T Consensus 132 ~~vd~~------~~e~l~~al~~~------TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~- 198 (395)
T PRK05967 132 EYYDPE------IGAGIAKLMRPN------TKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLD- 198 (395)
T ss_pred EEeCCC------CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChhH-
Confidence 998643 246788888765 48999999999999999999 9999999999999999988875334555
Q ss_pred CCCCCcEEEEccccccCCCCCc-eEEEEEeCC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG-FGCLFVKKS 352 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G-~G~L~Vr~~ 352 (632)
+++|+++.|..|+++.+..- .|++..+++
T Consensus 199 --~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~ 228 (395)
T PRK05967 199 --FGVDISIHAATKYPSGHSDILLGTVSANEK 228 (395)
T ss_pred --cCCCEEEEecccccCCCCCeeEEEEEcCHH
Confidence 69999999999977621111 565544443
No 176
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.62 E-value=2.6e-13 Score=148.08 Aligned_cols=288 Identities=15% Similarity=0.143 Sum_probs=182.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHHHHh---------cCCE
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRTSEK---------RGAR 241 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~a~~---------~G~~ 241 (632)
.+..++++++++.+. ...|+||+++++|+..++..... +|+ +++. ...||......+ ..... .+.+
T Consensus 88 ~~la~~l~~~~~~~~-~~~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~ 164 (398)
T PRK03244 88 IALAERLVELLGAPE-GGRVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGAL-ALTGQPAKRAPFEPLPGG 164 (398)
T ss_pred HHHHHHHHHhCCCCC-CCEEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHH-hccCCcccccCCCCCCCC
Confidence 578888899988542 12799999999999999886533 453 4553 346775322222 11100 0112
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
+..+|. .+.+++++.+.+ ++++|.+..+.|.+|...| ++ +.++|+++|+++++|-++.. |..
T Consensus 165 ~~~~~~------~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~ 232 (398)
T PRK03244 165 VEHVPY------GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRT 232 (398)
T ss_pred ceEeCC------CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccc
Confidence 222222 267888887753 3588888989999999998 88 99999999999999998753 211
Q ss_pred --CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 316 --MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 316 --m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
+..+......||++++ -|.+|. .-.+|+++++++.++.+.+...+. .|
T Consensus 233 g~~~~~~~~~~~pDi~t~--sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~~----------t~----------------- 282 (398)
T PRK03244 233 GAWFAHQHDGVTPDVVTL--AKGLGG-GLPIGACLAFGPAADLLTPGLHGS----------TF----------------- 282 (398)
T ss_pred chHHhhhhhCCCCCEEEE--chhhhC-CcccEEEEEcHHHHhhccCCCCcC----------CC-----------------
Confidence 1122334457897755 598772 345899999888765553211100 00
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.+ .++ ...+. .+.|+.+.+ +.+.+|++.+
T Consensus 283 ------~~-----~~~-------------~~aaa------------------------~a~l~~~~~---~~~~~~~~~~ 311 (398)
T PRK03244 283 ------GG-----NPV-------------ACAAA------------------------LAVLDTIAS---EGLLENAERL 311 (398)
T ss_pred ------CC-----CHH-------------HHHHH------------------------HHHHHHHHh---ccHHHHHHHH
Confidence 00 000 00111 145554433 4567899999
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
.++|++.|.++.| |.+. . . ..+|.++.+.+... ....+.+.+.++||.++..
T Consensus 312 ~~~l~~~L~~~~~------~~~~---~-v-~g~g~~~~i~~~~~-----~~~~~~~~l~~~Gv~~~~~------------ 363 (398)
T PRK03244 312 GEQLRAGIEALGH------PLVD---H-V-RGRGLLLGIVLTAP-----VAKAVEAAAREAGFLVNAV------------ 363 (398)
T ss_pred HHHHHHHHHhcCC------Ccee---e-E-eeccEEEEEEEecc-----HHHHHHHHHHHCCeEEeec------------
Confidence 9999999998844 3221 1 0 12566777766431 2344555555679888631
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+..+||+|+++..|.+||+++++.|++.+..
T Consensus 364 ----------------------------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 364 ----------------------------APDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred ----------------------------CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 2258999999999999999999999988753
No 177
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.61 E-value=7.5e-13 Score=145.05 Aligned_cols=215 Identities=11% Similarity=0.149 Sum_probs=141.3
Q ss_pred CCceEeecCCCCC--CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcC
Q 006746 107 SNHTCLDYFGIGL--FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLN 184 (632)
Q Consensus 107 ~~~vyLD~ag~gl--~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~ 184 (632)
++.++|+++...+ .|+.+.+++.+.+.... .+ .| ..+. | ..++.+.+.+.+++++|
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~-----------~~--~Y--~~~~-----G--~~~LR~aia~~l~~~~g 96 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGG-----------VQ--AY--TEYR-----G--DADIRELLAARLAAFTG 96 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCC-----------Cc--cC--CCCC-----C--CHHHHHHHHHHHHHHhC
Confidence 5678999877663 45666666554332100 00 00 0000 1 12344555555666668
Q ss_pred CCCCC-ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC----CccccCHHH
Q 006746 185 ISEND-YGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW----PRLRINSEK 258 (632)
Q Consensus 185 a~~~e-y~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~----~~~~i~~~~ 258 (632)
.+.+. ..|++|+|+++++.+++..+ +.+||+|++. ..|+. ....++..|++++.++++. .+..+++++
T Consensus 97 ~~~~~~~~I~it~Ga~~al~~~~~~l-~~~Gd~Vlv~~P~y~~-----~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~ 170 (405)
T PRK06207 97 APVDAADELIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFA-----NRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQ 170 (405)
T ss_pred CCCCCCCCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh-----HHHHHHHcCCEEEEEeccccCcccCCCcCHHH
Confidence 54322 37999999999999999998 6899997754 35543 2345677899999998752 235689999
Q ss_pred HHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCCCC-CCCC-CCCcE
Q 006746 259 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMDSF-GLSL-VRPDF 328 (632)
Q Consensus 259 l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~~l-dls~-~~~Df 328 (632)
|++++.++ ++++.++..+|+||..++ ++ |+++|+++|+++++|-+-.- +....++ .+.. ..-=+
T Consensus 171 l~~~~~~~------~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi 244 (405)
T PRK06207 171 LEEAFKAG------VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVI 244 (405)
T ss_pred HHHhhhhc------CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEE
Confidence 99988764 478999999999999998 55 77889999999999987432 2100011 1111 11128
Q ss_pred EEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 329 LICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 329 ~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
++.|+-|.||. | | +|+++..+++++.+
T Consensus 245 ~i~SfSK~~~l-p-GlRiG~ii~~~~l~~~~ 273 (405)
T PRK06207 245 TIMGPSKTESL-S-GYRLGVAFGSPAIIDRM 273 (405)
T ss_pred EEecchhhccC-c-ccceEEEEcCHHHHHHH
Confidence 89999999996 3 7 88887766655433
No 178
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.61 E-value=7.3e-14 Score=148.75 Aligned_cols=161 Identities=12% Similarity=0.131 Sum_probs=116.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.+++++|.+++ .|++|+|+++++.+++..+ .+| +|++ ...|+. +...++..|++++.++
T Consensus 50 ~~lr~~la~~~~~~~~--~i~~t~G~~~~i~~~~~~l--~~g-~vl~~~p~y~~-----~~~~~~~~g~~~~~~~----- 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA--SVLPVNGAQEAIYLLPRLL--APG-RVLVLAPTYSE-----YARAWRAAGHEVVELP----- 114 (330)
T ss_pred HHHHHHHHHHhCCChh--hEEECCCHHHHHHHHHHHh--CCC-eEEEeCCCcHH-----HHHHHHHcCCEEEEeC-----
Confidence 6899999999998765 7999999999999988775 567 5554 334442 2345678899988775
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCCCCC-CCC-CCCC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKDMDS-FGL-SLVR 325 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~m~~-ldl-s~~~ 325 (632)
|++++++.+. + ++++++++.+|+||..+|.+ |+++|+++|+++++|.+...-..-.+ .++ ...+
T Consensus 115 ---d~~~l~~~~~-~------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 184 (330)
T TIGR01140 115 ---DLDRLPAALE-E------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFP 184 (330)
T ss_pred ---CHHHHHhhcc-c------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCC
Confidence 6788888773 2 36888899999999999944 56778899999999998642110011 111 1234
Q ss_pred CcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 326 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
-++++.|+.|.||.+...+|+++++++.++.+.
T Consensus 185 ~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~ 217 (330)
T TIGR01140 185 GLVVLRSLTKFFGLAGLRLGFVVAHPALLARLR 217 (330)
T ss_pred CEEEEEecchhhcCchhhhhheeCCHHHHHHHH
Confidence 579999999999942123599998877665544
No 179
>PRK07683 aminotransferase A; Validated
Probab=99.61 E-value=2e-13 Score=148.51 Aligned_cols=172 Identities=13% Similarity=0.166 Sum_probs=122.0
Q ss_pred HHHHHHHHHHc----CC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL----NI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l----~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.+++++ |. +++ ..|++|+|+++|+.+++..+ +++||+|++.. .|+. . ...++..|++++.+
T Consensus 68 ~~lr~~ia~~l~~~~g~~~~~~-~~I~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~~ 140 (387)
T PRK07683 68 LELRKAACNFVKDKYDLHYSPE-SEIIVTIGASEAIDIAFRTI-LEPGTEVILPAPIYPG-Y----EPIIRLCGAKPVFI 140 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-CCCCCEEEEcCCCccc-h----HHHHHHcCCEEEEe
Confidence 36777788776 43 332 16999999999999999998 78999987643 3332 2 23346689999999
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCC-CCCCCC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPK-DMDSFG 320 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~-~m~~ld 320 (632)
+.+..+..++.+++++.+.++ +++++++..+|+||..++ ++ |+++|+++|+++++|.+..... +-....
T Consensus 141 ~~~~~~~~~~~~~l~~~~~~~------~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 214 (387)
T PRK07683 141 DTRSTGFRLTAEALENAITEK------TRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTS 214 (387)
T ss_pred ecCcccCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCC
Confidence 887444557888998887653 488999999999999998 55 7888999999999999754311 000111
Q ss_pred CCC----CCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 321 LSL----VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 321 ls~----~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
+.. .+-.+++.|+-|.||.+-.-+|++++.++.++.+
T Consensus 215 ~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~ 255 (387)
T PRK07683 215 IAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHI 255 (387)
T ss_pred hhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHH
Confidence 111 1236889999999996322378888776554433
No 180
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.61 E-value=8.9e-14 Score=150.15 Aligned_cols=163 Identities=9% Similarity=0.086 Sum_probs=117.5
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|++.......+.+++++++.++. .++.++|+++|+.++.. + +++||+|++. ..|.. ...++.....+.++++
T Consensus 48 Y~R~~~p~~~~le~~lA~leg~~----~~v~~~sG~aAi~~~l~-~-l~~GD~VI~~~~~yg~-~~~~~~~~~~~~~~~~ 120 (364)
T PRK07269 48 YTRTKNPTRAKLEETLAAIESAD----YALATSSGMSAIVLAFS-V-FPVGSKVVAVRDLYGG-SFRWFNQQEKEGRFHF 120 (364)
T ss_pred eeCCCCccHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHH-H-hCCCCEEEEecCCcCc-hHHHHHHHHhcCcEEE
Confidence 33333445568899999999864 57889999999999885 3 5899997754 34443 3445443333223322
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
.. ..|+++++++|+++| +++.+...+|+||...|++ |+++||++|+.+++|.+.+.|..-.+++
T Consensus 121 ~~--------~~d~~~l~~~i~~~T------klV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~- 185 (364)
T PRK07269 121 TY--------ANTEEELIAAIEEDT------DIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIE- 185 (364)
T ss_pred Ee--------cCCHHHHHHhcCcCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchh-
Confidence 11 147789999887654 8999999999999999999 9999999999999999976654223443
Q ss_pred CCCCCcEEEEccccccCCCCCc--eEEEEEeC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG--FGCLFVKK 351 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~ 351 (632)
.++|+++.|++|++|. +.. .|+++.++
T Consensus 186 --~gaDivv~S~tK~l~g-~~d~~gG~v~~~~ 214 (364)
T PRK07269 186 --LGADIVLHSATKYLSG-HNDVLAGVVVTND 214 (364)
T ss_pred --hCCcEEEecCceeccC-CCcccceEEEeCc
Confidence 5899999999998873 433 35445443
No 181
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.60 E-value=3.5e-13 Score=150.89 Aligned_cols=210 Identities=13% Similarity=0.061 Sum_probs=136.8
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcC----
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLN---- 184 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~---- 184 (632)
.+-+|.++..++|..++++..+.+..... ....|+... =..+.|+.|+++++
T Consensus 78 ~~i~~~~~~~~~P~~~~~~~~~~~~~~~~----------------------~~~~Y~~~~--G~~~LR~aia~~~~~~~g 133 (481)
T PTZ00377 78 FLLEDPSVSSLFPADVVARAKEYLNAIGG----------------------GTGAYTDSA--GYPFVRKAVAAFIERRDG 133 (481)
T ss_pred hhhcCccccccCCHHHHHHHHHHHHhCCC----------------------cccCcCccc--CCHHHHHHHHHHHHHhcC
Confidence 34557778889999999986543321100 001122111 12367888888765
Q ss_pred --CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCC-ccccCHHHHH
Q 006746 185 --ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWP-RLRINSEKLR 260 (632)
Q Consensus 185 --a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~-~~~i~~~~l~ 260 (632)
++++ +|++|+|+++|+.+++..+-..+||+|++.. .|+. ....++..|++++.++.+.. +..+++++|+
T Consensus 134 ~~~~~~--~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~-----y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~ 206 (481)
T PTZ00377 134 VPKDPS--DIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPL-----YSAAITLLGGKQVPYYLDEEKGWSLDQEELE 206 (481)
T ss_pred CCCChh--hEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchh-----HHHHHHHcCCEEEEEEeccccCCCCCHHHHH
Confidence 4444 7999999999999999998326899987653 4442 23455778999999998743 3468999999
Q ss_pred HHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----C-CCCCCC-----CCCCC--
Q 006746 261 KMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----P-KDMDSF-----GLSLV-- 324 (632)
Q Consensus 261 ~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g-~~m~~l-----dls~~-- 324 (632)
+.+.+..+...+++++++...+|+||..++ ++ |+++|+++|+++++|-+-.- + ....++ ++...
T Consensus 207 ~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~ 286 (481)
T PTZ00377 207 EAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYN 286 (481)
T ss_pred HHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhccccc
Confidence 998752111124688888889999999999 66 78889999999999986321 1 100111 11110
Q ss_pred -CC-cEEEEcccc-ccCCCCCceEEEEE
Q 006746 325 -RP-DFLICSFYQ-IFGENPSGFGCLFV 349 (632)
Q Consensus 325 -~~-Df~~~S~hK-~~G~~P~G~G~L~V 349 (632)
+. =+++.|+-| ++|.+.-.+|++++
T Consensus 287 ~~~~vi~~~S~SK~~~~~~GlRiG~~~~ 314 (481)
T PTZ00377 287 TDVELVSFHSTSKGIIGECGRRGGYFEL 314 (481)
T ss_pred CCeEEEEEecCCcccccCCcCceEEEEE
Confidence 00 156779999 46753234587776
No 182
>PRK07777 aminotransferase; Validated
Probab=99.59 E-value=4.2e-13 Score=145.88 Aligned_cols=170 Identities=14% Similarity=0.144 Sum_probs=119.6
Q ss_pred HHHHHHHH----HcCCCCCC-ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMD----FLNISEND-YGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~----~l~a~~~e-y~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+.|+.+++ .+|.+.+. ..|++|+|+|+|+.+++.++ ..+||+|++. ..|+. + ...++..|++++.++.
T Consensus 65 ~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~vli~~p~y~~--~---~~~~~~~g~~~~~~~~ 138 (387)
T PRK07777 65 ELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGL-VEPGDEVLLIEPYYDS--Y---AAVIAMAGAHRVPVPL 138 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh--h---HHHHHHCCCEEEEeec
Confidence 34555554 46764322 25999999999999999888 6889997654 34442 2 3445667999999988
Q ss_pred cCC--ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 248 SWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 248 ~~~--~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
+.. +..+++++|++.+.++ ++++.++..+|+||..++ ++ |+++|+++|+++++|.+... +....
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~ 212 (387)
T PRK07777 139 VPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHL 212 (387)
T ss_pred CCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcc
Confidence 632 3458999999888653 488899999999999987 55 78899999999999987532 21001
Q ss_pred CCC-CC-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 318 SFG-LS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 318 ~ld-ls-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
++. +. ..+.++++.|+.|.||. | | +|+++.+++.++.+
T Consensus 213 ~~~~~~~~~~~~i~~~S~SK~~g~-~-GlRiG~~~~~~~l~~~~ 254 (387)
T PRK07777 213 PLATLPGMRERTVTISSAAKTFNV-T-GWKIGWACGPAPLIAAV 254 (387)
T ss_pred cHhhCCCCcCcEEEEeechhhccC-c-CceeEEEecCHHHHHHH
Confidence 221 11 13468999999999995 3 6 58888776654433
No 183
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.59 E-value=5.8e-13 Score=145.44 Aligned_cols=325 Identities=10% Similarity=0.150 Sum_probs=197.8
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.++.... .+. .. ..+...+..++++
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~------------------~~~--~~-----~~~~~~~l~~~l~ 92 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTL------------------TSR--AF-----HSDQLGPWYEKVA 92 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccc------------------ccc--cc-----CCHHHHHHHHHHH
Confidence 67889998533 44557777776654432100 000 00 1233456777888
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-------CCC-CeEE-EeccccchhhHHHHHHHHh----cCC-----E
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-------MSV-KNLL-TVYDYESEAVEAMIRTSEK----RGA-----R 241 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-------~~g-d~il-t~~d~~s~~v~~~~~~a~~----~G~-----~ 241 (632)
++++.+ .++|++++|+|+..++.... + .+| ++|+ +...||......+ .+... .+. .
T Consensus 93 ~~~~~~----~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (396)
T PRK04073 93 KLTGKD----MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAV-SLSSEEEYKRGFGPMLPG 167 (396)
T ss_pred hcCCCC----eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHH-hhcCCcccccCCCCCCCC
Confidence 887642 68999999999887766431 1 134 4565 4457776333222 11110 000 1
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
+..++. -+++++++.++++ ++++++..++|.+|...| ++ +.++|+++|+++++|.++.. |..
T Consensus 168 ~~~~~~------~d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~ 235 (396)
T PRK04073 168 IKKIPY------GDLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRT 235 (396)
T ss_pred ceEeCC------CCHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcC
Confidence 222222 1678888888643 589999999999999988 77 89999999999999998773 321
Q ss_pred --CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 316 --MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 316 --m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
+..++.....||++++| |.+|.+.--+|++..+++.++.+.....+. .|
T Consensus 236 g~~~~~~~~~~~pdi~~~s--K~lg~gg~~ig~~~~~~~i~~~~~~~~~~~----------t~----------------- 286 (396)
T PRK04073 236 GKLFACDWDNVTPDMYILG--KALGGGVFPISCVAANRDILGVFTPGSHGS----------TF----------------- 286 (396)
T ss_pred cHHHHhhhcCCCCCEEEec--ccccCCCCcceEEEEcHHHHhhhcCCCCCC----------CC-----------------
Confidence 11234445578988765 977742123799998887765553211000 00
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.+ |.....+. .++|+.+.+. .+.+|.+.+
T Consensus 287 ------~~------------------~~~~~aaa------------------------~aaL~~~~~~---~l~~~~~~~ 315 (396)
T PRK04073 287 ------GG------------------NPLACAVS------------------------IAALEVLEEE---KLPERSLEL 315 (396)
T ss_pred ------CC------------------CHHHHHHH------------------------HHHHHHHHhc---CHHHHHHHH
Confidence 00 00001111 1567666543 456788889
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
.++|.+.|.++.+ +.+ ++. ..+|.++.+.+.+ ....+.+.+.++||.++.
T Consensus 316 ~~~l~~~L~~l~~------~~i---~~~--~~~g~~~~~~~~~------~~~~~~~~l~~~Gv~~~~------------- 365 (396)
T PRK04073 316 GEYFKEQLKEIDN------PMI---KEV--RGRGLFIGVELNE------PARPYCEALKEEGLLCKE------------- 365 (396)
T ss_pred HHHHHHHHHhhcC------Ccc---cce--ecceEEEEEEecc------hHHHHHHHHHHCCeEEec-------------
Confidence 9999999998832 323 111 1346666666543 234444445557888741
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
.+.++||+++++..|.|||+++++.|++++
T Consensus 366 ---------------------------~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 366 ---------------------------THETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ---------------------------CCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 022589999999999999999999999875
No 184
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.59 E-value=3.8e-13 Score=146.77 Aligned_cols=166 Identities=11% Similarity=0.159 Sum_probs=122.4
Q ss_pred HHHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|+++++ ++++ .|++|+|+++++++++.++ ..+||+|++.. .|.. + ...++..|++++.+
T Consensus 76 ~~lr~~ia~~l~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vli~~p~~~~----~-~~~~~~~g~~v~~v 147 (394)
T PRK06836 76 PEVREAIAESLNRRFGTPLTAD--HIVMTCGAAGALNVALKAI-LNPGDEVIVFAPYFVE----Y-RFYVDNHGGKLVVV 147 (394)
T ss_pred HHHHHHHHHHHHHHhCCCCCcC--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc----H-HHHHHHcCCEEEEE
Confidence 467888888875 4554 7999999999999999998 68999977543 3332 2 34457789999999
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhh------CCcEEEEeccccC---
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQE------NDWHILIDACALG--- 312 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~------~g~~vlvDaaq~~--- 312 (632)
+.+..++.++.++++++++++ ++++++++.+|+||..+|.+ |+++|++ +|+++++|.+...
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~ 221 (394)
T PRK06836 148 PTDTDTFQPDLDALEAAITPK------TKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY 221 (394)
T ss_pred ecCCccCcCCHHHHHhhcCcC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc
Confidence 987444678999999988654 48999999999999999965 5667888 8999999997431
Q ss_pred -CCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCC
Q 006746 313 -PKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKST 353 (632)
Q Consensus 313 -g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~ 353 (632)
+.. .+.-++.+.-.+++.|+.|.||.+.-.+|++++.+..
T Consensus 222 ~~~~-~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~ 262 (394)
T PRK06836 222 DGAE-VPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEM 262 (394)
T ss_pred CCCC-CCChHHccCcEEEEecchhhccCcceeeEEEecCHHH
Confidence 111 1111223344789999999998532347888876654
No 185
>PRK07505 hypothetical protein; Provisional
Probab=99.59 E-value=8.5e-13 Score=144.38 Aligned_cols=201 Identities=10% Similarity=0.133 Sum_probs=122.6
Q ss_pred CCceEeecCCCCCC----CHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIGLF----SYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (632)
Q Consensus 107 ~~~vyLD~ag~gl~----~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~ 182 (632)
+++.|||+++.+.+ .+.+++++.+.+.... .. ...++. +....+..++.+++|+++
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g--------~~---------~~~~~~---~~~~~~~~~~l~~~la~~ 103 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTG--------SL---------HLSSSR---TRVRSQILKDLEEALSEL 103 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhC--------CC---------CCCccc---hhhhhHHHHHHHHHHHHH
Confidence 57889999887766 6777777765443210 00 000011 111346778999999999
Q ss_pred cCCCCCCccEEEeCCHHHHHHHHHhhC---CCCCCCe-EE-EeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHH
Q 006746 183 LNISENDYGMVFTANRTSAFKLLAESY---PFMSVKN-LL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSE 257 (632)
Q Consensus 183 l~a~~~ey~vvft~naT~al~lv~~sl---~~~~gd~-il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~ 257 (632)
++. + .++|+ ++++|...++..+ -+.+|+. ++ ....+|. ++....... +.+.+++.+|. .|.+
T Consensus 104 ~~~--~--~~~~~-sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~-s~~~~~~~~-~~~~~v~~~~~------~d~~ 170 (402)
T PRK07505 104 FGA--S--VLTFT-SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHA-SLNILKGIC-ADETEVETIDH------NDLD 170 (402)
T ss_pred hCC--C--EEEEC-ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhH-hHHhhhhhh-hcCCeEEEeCC------CCHH
Confidence 987 2 45566 4555665444321 1233443 43 4445554 332222222 24667777765 3778
Q ss_pred HHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC---C-C-CC---CCCCCCCCCCcE
Q 006746 258 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG---P-K-DM---DSFGLSLVRPDF 328 (632)
Q Consensus 258 ~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~---g-~-~m---~~ldls~~~~Df 328 (632)
++++++.+++ +++++....|.||...|++ +.++|+++|+++++|.++.. | . .+ ..++....+..+
T Consensus 171 ~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i 244 (402)
T PRK07505 171 ALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTI 244 (402)
T ss_pred HHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeE
Confidence 9998886543 6777777788999999999 99999999999999999743 1 1 00 112211122346
Q ss_pred EEEccccccCCCCCceEEEEE
Q 006746 329 LICSFYQIFGENPSGFGCLFV 349 (632)
Q Consensus 329 ~~~S~hK~~G~~P~G~G~L~V 349 (632)
++.|+-|.+|. .| |++.+
T Consensus 245 ~~~s~sK~~~~--~G-g~~~~ 262 (402)
T PRK07505 245 IAASLGKAFGA--SG-GVIML 262 (402)
T ss_pred EEEechhhhhc--cC-eEEEe
Confidence 77799998883 34 66544
No 186
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.59 E-value=2.4e-13 Score=141.56 Aligned_cols=303 Identities=17% Similarity=0.201 Sum_probs=195.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeC-CHHHHHHHHHhhCCCCCCCe-EEE-eccccchhhHHHHHHHHhcCCEEEEE
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTA-NRTSAFKLLAESYPFMSVKN-LLT-VYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~-naT~al~lv~~sl~~~~gd~-ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
..+++++++.+.++|++| ++|.|.|.+ ++|..+.++.-++--..+.. +.+ ..+.. +..| |++.+..+..+
T Consensus 49 ~~v~~~a~~~lreLl~iP-d~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~--a~~e----A~~~~~~~~~~ 121 (365)
T COG1932 49 KNVLEEAEKDLRELLNIP-DDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEF--AIKE----AKKVGKQPKLI 121 (365)
T ss_pred HHHHHHHHHHHHHHhCCC-CCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHh--HHHH----HHHhccccccc
Confidence 678999999999999998 579999987 58999999999984333321 332 22333 2334 44444322222
Q ss_pred ec---cCCcccc-CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC
Q 006746 246 EF---SWPRLRI-NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG 320 (632)
Q Consensus 246 ~~---~~~~~~i-~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld 320 (632)
.. ..+.+.+ +++.+. +.+ +...|.+++..+.+|+.+|-. ... .+..+++|+++.+.. .++|
T Consensus 122 ~~~~~~~~~~~iP~~~~~~--~~~------~~ayv~~~~NeTi~Gv~v~~~p~~~----~~~~~v~D~SS~ils--r~iD 187 (365)
T COG1932 122 DARIEEAGYGSIPDLSKWD--FSD------NDAYVHFCWNETISGVEVPELPDIG----SDGLLVADASSAILS--RPID 187 (365)
T ss_pred ccceeccCccCCCChhhcc--cCC------CccEEEEecCCcccceEccCCCCCC----CCceEEEecccHHhc--CCCC
Confidence 11 1112222 222221 221 246799999999999999842 211 127899999987765 5899
Q ss_pred CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
++ +.|.+.++.+|-+| |.|+++++||+++++++++... |..-. +.. .. +.+
T Consensus 188 vs--k~dviyagaQKnlG--paGltvvIvr~~~l~r~~~~~~-------P~if~-y~~------~~-----------~~~ 238 (365)
T COG1932 188 VS--KYDVIYAGAQKNLG--PAGLTVVIVRPDLLERAESYTL-------PSIFD-YLT------HA-----------DNG 238 (365)
T ss_pred hh--HcceEEEehhhccC--ccceEEEEEcHHHHhcccccCC-------chHhh-chh------hh-----------ccC
Confidence 87 56999999999999 9999999999999988765310 00000 000 00 011
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVN 479 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~ 479 (632)
.+-|+|.+.++- .....|+++.+. |++.+++|.+.=++.|++
T Consensus 239 ----------------s~yNTPptfa~y---------------------~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~ 281 (365)
T COG1932 239 ----------------SMYNTPPTFAWY---------------------LLGLVFKWLKSQGGLEALEARNQAKAQLLYD 281 (365)
T ss_pred ----------------CccCCcHHHHHH---------------------HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 123344433332 112788888887 699999999999999999
Q ss_pred HHHccCCCCCCCCCcEEEECCC-CCCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPK-IRFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 557 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~-~~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~ 557 (632)
.+.+- + .|.+. .+..|+ -.|+|.+.+.+ ++...|+++.+ .|...-.|
T Consensus 282 ~id~s--------~---fy~~~v~~~~RS~mnV~f~~~~~~---ld~~fv~eae~-~gl~~lkG---------------- 330 (365)
T COG1932 282 WIDKS--------D---FYRNLVAKANRSRMNVTFTLVDAE---LDKGFVAEAEA-AGLIYLKG---------------- 330 (365)
T ss_pred HHHhC--------C---ccccccchhhccceeEEEEcCcHH---HHHHHHHHHHH-cCCceecc----------------
Confidence 99875 1 12222 123454 46788877633 56666665544 44433222
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+-.|.+|+|+.---..|||+.|++|++.|..
T Consensus 331 ----------------------hr~vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 331 ----------------------HRSVGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred ----------------------ccCCCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 12345699999999999999999999998854
No 187
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.59 E-value=5.8e-13 Score=147.92 Aligned_cols=174 Identities=14% Similarity=0.092 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCC-
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWP- 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~- 250 (632)
+.+.|++|+++++.. .|++|.|+|+|+.++..++ +++|| |++..-|......+ .+..|++++.++.+..
T Consensus 80 ~~~Lreaia~~~~~~----~vv~t~ggt~A~~~~~~al-l~pGD-Vii~~p~~~~~~~~----i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 80 YYRLEDAVKDIFGYP----YTIPTHQGRAAEQILFPVL-IKKGD-VVPSNYHFDTTRAH----IELNGATAVDLVIDEAL 149 (460)
T ss_pred HHHHHHHHHHHhCCC----cEEECCCHHHHHHHHHHHh-CCCCC-EEccCCcccchHHH----HHHcCCEEEEEeccccc
Confidence 357899999999974 4899999999999999998 89999 76554444322222 3457999999988521
Q ss_pred --------ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCc-cccc---hH-HHHHHhhCCcEEEEeccccCCCC--
Q 006746 251 --------RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTG-ARYP---YL-WMRIAQENDWHILIDACALGPKD-- 315 (632)
Q Consensus 251 --------~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG-~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~-- 315 (632)
.+.+|.++|++.|++++ .++++++++...+|.|| ..++ ++ |.++|+++|++++.|+|+....-
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f 227 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEEVG--AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYF 227 (460)
T ss_pred cccccccccCCcCHHHHHHHHhhcC--CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhh
Confidence 24599999999998632 23579999999999998 6665 46 88899999999999998864210
Q ss_pred -------CCCCCCCC------CCCcEEEEccccccCCCCCceEEEEEeC-CCccccCC
Q 006746 316 -------MDSFGLSL------VRPDFLICSFYQIFGENPSGFGCLFVKK-STVPILVD 359 (632)
Q Consensus 316 -------m~~ldls~------~~~Df~~~S~hK~~G~~P~G~G~L~Vr~-~~~~~L~~ 359 (632)
.....+.. ...|++++|++|.+.. |.| |+|+.++ ++++.++.
T Consensus 228 ~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~-~~G-G~i~~~d~~l~~~~~~ 283 (460)
T PRK13238 228 IKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMV-NIG-GLLCFRDEDLFTECRT 283 (460)
T ss_pred hhhccccccCCCHHHHhhhhcccCcEEEEecccCCCC-cce-eEEEcChHHHHHHhhh
Confidence 01112111 1369999999995443 776 8888884 55555543
No 188
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.58 E-value=3.7e-13 Score=157.52 Aligned_cols=357 Identities=13% Similarity=0.092 Sum_probs=223.6
Q ss_pred ccCcCCCCceEeecCCCCCCCH---HHHH-HHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHH
Q 006746 101 YYQLSLSNHTCLDYFGIGLFSY---NQLH-KQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMK 176 (632)
Q Consensus 101 f~~L~~~~~vyLD~ag~gl~~~---~~~~-a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R 176 (632)
|..|..+|+++-.+.|.|.++. ++++ .+... |.+| + +|+.=-| ...+|. -+.+=+.+
T Consensus 55 ~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~--------p~~~------T-aytPyQ~--EisQG~--Le~l~e~Q 115 (939)
T TIGR00461 55 LKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLEN--------PGWY------T-AYTPYQP--EISQGR--LEALLNFQ 115 (939)
T ss_pred HHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhC--------chhh------h-cCCCCCh--hhhhHH--HHHHHHHH
Confidence 5556556788888889998876 5555 33221 2111 0 1111111 122232 35666899
Q ss_pred HHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCC--CCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccc
Q 006746 177 KRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMS--VKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLR 253 (632)
Q Consensus 177 ~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~--gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~ 253 (632)
..|+++.|.+.. +..+...+|.+.+.++.++.... +++|++ ...||. ...-+...++..|++|+.++.
T Consensus 116 t~i~eLtGm~~a--NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~-~~~v~~t~a~~~g~~v~~~~~------ 186 (939)
T TIGR00461 116 TVVSDLTGLPVA--NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQ-TKSVLHTRAKPFGIEVIVVDC------ 186 (939)
T ss_pred HHHHHHHCCChh--hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcc-hHHHHHHHHHhcCcEEEEEcH------
Confidence 999999999865 45677899999998887764433 356765 456765 555556677889999988743
Q ss_pred cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEc
Q 006746 254 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICS 332 (632)
Q Consensus 254 i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S 332 (632)
++|+..+ + + ..++....|..|.+.+++ |++++|++|.++++++-..+.. ......++++|+++.+
T Consensus 187 ---~~l~~~~--~------~-~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~--ll~~Pge~GaDi~vg~ 252 (939)
T TIGR00461 187 ---SDIKKAV--D------V-FGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALT--LLTPPGHYGADIVLGS 252 (939)
T ss_pred ---HHHhhcC--C------E-EEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhC--CcCCHHHcCCcEEeeC
Confidence 3454433 1 2 245556779999999999 9999999999999977544432 2333456899999888
Q ss_pred cccc-----cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCc
Q 006746 333 FYQI-----FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 407 (632)
Q Consensus 333 ~hK~-----~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~ 407 (632)
.+++ ||. | +.|++.+|++....+..+..|=+++. ..++ .+.--+.+.+. +. .+|
T Consensus 253 ~q~fg~p~g~GG-P-~aG~~a~~~~l~r~lPgrivG~s~D~--~G~~------~~~l~LqtReq-hI--rRe-------- 311 (939)
T TIGR00461 253 SQRFGVPMGYGG-P-HAAFFAVKDEYNRKMPGRIVGVSKDA--LGNT------ALRLALQTREQ-HI--RRD-------- 311 (939)
T ss_pred CCccCCCCCCCC-C-ceeeeeecHhhHhhCCCCceeEEecC--CCCc------cceeecccccc-cc--ccc--------
Confidence 8873 343 4 69999999988777766655411110 0000 00000111110 10 012
Q ss_pred cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHccC
Q 006746 408 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRG--LDQVDSLGLTMISRRGRCLINWLVNALMKLQ 485 (632)
Q Consensus 408 ~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a--Ld~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~ 485 (632)
-+|.|+..-++|- ++ .++ +.++-..|+.+|.+|+..++.+|.++|.++
T Consensus 312 --------kAtSNICt~qaL~--------------------a~-~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~- 361 (939)
T TIGR00461 312 --------KATSNICTAQVLL--------------------AN-VASSYCVYHGPKGLKNIARRIHSLTSILANGLEND- 361 (939)
T ss_pred --------ccCcchhHHHHHH--------------------HH-HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 3445554444442 00 022 344445689999999999999999999986
Q ss_pred CCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhc
Q 006746 486 HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 565 (632)
Q Consensus 486 h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~ 565 (632)
| +++..+ ..-..+.+.+.. .+.+.+.+.+.++||.++..
T Consensus 362 -----G---~~~~~~----~fF~~~~v~~~~-----~~~~~i~~~~~~~gi~l~~~------------------------ 400 (939)
T TIGR00461 362 -----P---HELINK----TWFDTLTVKVGN-----GISSELLKAAEEFNINLRAV------------------------ 400 (939)
T ss_pred -----C---CcccCC----CccceEEEEeCC-----CCHHHHHHHHHHCCCeeeec------------------------
Confidence 5 344333 123345555432 24566666666789987621
Q ss_pred cccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 566 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
..+.|++|++.++|.+||+.|++.+.
T Consensus 401 ----------------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 401 ----------------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ----------------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 12489999999999999999999985
No 189
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.58 E-value=1.1e-12 Score=143.58 Aligned_cols=164 Identities=13% Similarity=0.116 Sum_probs=119.2
Q ss_pred HHHHHHHHHHcCC------CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFLNI------SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l~a------~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|+++++. +++ +|++|+|+|+|+.+++.++ ..+||+|++. ..|.. + ...++..|++++.+
T Consensus 76 ~~lr~~ia~~l~~~~~~~~~~~--~ii~t~G~t~al~~~~~~l-~~~gd~Vlv~~p~y~~----~-~~~~~~~g~~~~~~ 147 (403)
T TIGR01265 76 LAAREAVAEYLSSDLPGKLTAD--DVVLTSGCSQAIEICIEAL-ANPGANILVPRPGFPL----Y-DTRAAFSGLEVRLY 147 (403)
T ss_pred HHHHHHHHHHHHhhcCCCCCHH--HEEEecChHHHHHHHHHHh-CCCCCEEEEeCCCchh----H-HHHHHHcCCEEEEe
Confidence 4689999999985 333 7999999999999999998 4889997654 34432 2 34567789999998
Q ss_pred eccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCC
Q 006746 246 EFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDM 316 (632)
Q Consensus 246 ~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m 316 (632)
+.+. .++.++.+++++++.++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.+..- +...
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 221 (403)
T TIGR01265 148 DLLPEKDWEIDLDGLEALADEK------TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPF 221 (403)
T ss_pred cCCcccCCccCHHHHHHHhCcC------ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCc
Confidence 8752 34568999999888654 488999999999999997 66 88899999999999997432 1100
Q ss_pred CC-CCCCCCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 317 DS-FGLSLVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 317 ~~-ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
.+ ..+.....=+++.|+-|.|+.+--.+|++++.
T Consensus 222 ~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~ 256 (403)
T TIGR01265 222 IPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIH 256 (403)
T ss_pred cchhhhccCCcEEEEeecccccCCCcceEEEEEEe
Confidence 11 11111111267789999988632347888775
No 190
>PRK09265 aminotransferase AlaT; Validated
Probab=99.57 E-value=1.4e-12 Score=142.80 Aligned_cols=160 Identities=13% Similarity=0.152 Sum_probs=117.0
Q ss_pred HHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ +++++ +|++|+|+++++.+++..+ +++||+|++. ..|.. ....++..|+++..++
T Consensus 76 ~lr~~ia~~~~~~~~~~~~~~--~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~p~y~~-----~~~~~~~~g~~~v~~~ 147 (404)
T PRK09265 76 SARKAIMQYYQQKGIPDVDVD--DIYIGNGVSELIVMAMQAL-LNNGDEVLVPAPDYPL-----WTAAVSLSGGKPVHYL 147 (404)
T ss_pred HHHHHHHHHHhccCCCCCCcc--cEEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCCcC-----hHHHHHHcCCEEEEEe
Confidence 6888899987 67766 7999999999999999988 7899997654 45553 1334566799988887
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
.+.. ++.++.+++++.+.++ ++++++++.+|+||..+| ++ |+++|+++|+++++|-+..- +....
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 221 (404)
T PRK09265 148 CDEEAGWFPDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI 221 (404)
T ss_pred cccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC
Confidence 7532 4568899999888654 489999999999999999 77 88999999999999986321 21001
Q ss_pred CC-CCCCCCCc-EEEEccccccCCCCCc--eEEEEEe
Q 006746 318 SF-GLSLVRPD-FLICSFYQIFGENPSG--FGCLFVK 350 (632)
Q Consensus 318 ~l-dls~~~~D-f~~~S~hK~~G~~P~G--~G~L~Vr 350 (632)
++ .+.. +.. +++.|+-|.||. | | +|+++..
T Consensus 222 ~~~~~~~-~~~vi~~~S~SK~~~~-p-GlRiG~~v~~ 255 (404)
T PRK09265 222 SIASLAP-DLLCVTFNGLSKAYRV-A-GFRVGWMVLS 255 (404)
T ss_pred CHHHcCC-CceEEEEecchhhccC-c-ccceEEEEEe
Confidence 11 1111 112 355778899985 3 6 5888864
No 191
>PLN00175 aminotransferase family protein; Provisional
Probab=99.57 E-value=1.4e-12 Score=143.42 Aligned_cols=171 Identities=15% Similarity=0.114 Sum_probs=121.0
Q ss_pred HHHHHHHHHc----CC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----NI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ |. +++ ..|++|+|+++|+.+++.++ +.+||+|++.. .|.. ....++..|++++.++
T Consensus 95 ~Lr~aia~~~~~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~-----~~~~~~~~g~~~~~v~ 167 (413)
T PLN00175 95 ELNSAIAERFKKDTGLVVDPE-KEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDS-----YEATLSMAGAKIKTVT 167 (413)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CCEEEeCCHHHHHHHHHHHh-CCCCCEEEEeCCCchh-----HHHHHHHcCCEEEEEE
Confidence 4455555544 53 443 25999999999999999988 78999987653 3332 2344577899999999
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC---CCCCCC-
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG---PKDMDS- 318 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~---g~~m~~- 318 (632)
++.++..+++++|++++.++ ++++.+++.+|+||..++ ++ |+++|+++|+++++|.+-.. .....+
T Consensus 168 ~~~~~~~~~~~~l~~~~~~~------~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~ 241 (413)
T PLN00175 168 LRPPDFAVPEDELKAAFTSK------TRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISM 241 (413)
T ss_pred CCcccCCCCHHHHHHhcCcC------ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccCh
Confidence 87445678999999988654 488999999999999997 55 67889999999999997432 111011
Q ss_pred CCCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 319 FGLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 319 ldls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
..+.. .+..+++.|+-|.||.+..-+|+++..++.++.+
T Consensus 242 ~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l 281 (413)
T PLN00175 242 ASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 281 (413)
T ss_pred hhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHH
Confidence 12211 2346888999999986323468888776655433
No 192
>PRK12414 putative aminotransferase; Provisional
Probab=99.57 E-value=1.3e-12 Score=142.11 Aligned_cols=176 Identities=10% Similarity=0.132 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHcCCCCC-CccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 170 GLESAMKKRIMDFLNISEN-DYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~-ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.+.+++.+++++|++-+ +.+|++|+|+++|+.+++.++ +.+||+|++. ..|.. . ...++..|++++.++.
T Consensus 70 ~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~-~----~~~~~~~g~~~~~v~~ 143 (384)
T PRK12414 70 ALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISAL-VHPGDEVIYFEPSFDS-Y----APIVRLQGATPVAIKL 143 (384)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHh-cCCCCEEEEeCCCccc-h----HHHHHHcCCEEEEEec
Confidence 5566777777778887521 126999999999999999998 7899997754 45543 2 2334567999999998
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMDSF 319 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~~l 319 (632)
++.+..++.++|++++.++ ++++.++..+|+||..++ ++ |+++|+++|+++++|.+-.- +....++
T Consensus 144 ~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~ 217 (384)
T PRK12414 144 SPEDFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSM 217 (384)
T ss_pred CccccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCc
Confidence 7556678999999888643 489999999999999885 55 77889999999999997431 2110111
Q ss_pred -CCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 320 -GLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 320 -dls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
.+.. .+--+++.|+-|.||.+-..+|++++.+++++.+
T Consensus 218 ~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l 257 (384)
T PRK12414 218 ARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEI 257 (384)
T ss_pred ccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHH
Confidence 1111 1124899999999985322358888877665444
No 193
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.57 E-value=1.6e-12 Score=140.59 Aligned_cols=288 Identities=9% Similarity=0.112 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-C----CCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-F-M----SVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-~----~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
+...+..+++++++|.+ .+++++|+++|+.+++..+. + . ++++|++. ..||. ...+.. ..++..
T Consensus 69 ~~~~~l~~~la~~~g~~----~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~-~~~~~~----~~~~~~ 139 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD----RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHG-RTMGAL----SATGQP 139 (379)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCC-ccHHHH----HhcCCh
Confidence 55678999999999874 69999999999998887542 1 1 26787654 35553 222211 111111
Q ss_pred EE----EeccCCccc----cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc-c---hH-HHHHHhhCCcEEEEecc
Q 006746 243 MS----AEFSWPRLR----INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-P---YL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 243 ~~----v~~~~~~~~----i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~-p---l~-i~~~a~~~g~~vlvDaa 309 (632)
.. .+.. ++.. -|++++++.+.++ ++++.+.+..+.+|... + ++ +.++|+++|+++++|.+
T Consensus 140 ~~~~~~~~~~-~~~~~~~~~d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~ 212 (379)
T TIGR00707 140 KYQKGFEPLV-PGFSYAPYNDIESLKKAIDDE------TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEV 212 (379)
T ss_pred hhhccCCCCC-CCceeeCCCCHHHHHHHhhhC------eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 10 1111 1111 1688998888753 47888888888888753 3 66 88999999999999999
Q ss_pred cc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCC
Q 006746 310 AL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 310 q~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
+. .+.+ ..+++.....+|++ ++.|.+| ++..+|+++.+++.++.+.+...+ . .|
T Consensus 213 ~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~riG~~~~~~~~~~~~~~~~~~-~---------~~---------- 269 (379)
T TIGR00707 213 QTGIGRTGKFFAYEHYGIEPDII--TLAKGLG-GGVPIGATLAKEEVAEAFTPGDHG-S---------TF---------- 269 (379)
T ss_pred ccCCCccchhhhHHhcCCCCCEE--EEccccc-CCcccEEEEEcHHHHhhhcCCCCC-C---------CC----------
Confidence 75 3321 01222223467866 4679888 245689999888776655432110 0 00
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 466 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I 466 (632)
+. +.+...+.. ++|+++.. ..+
T Consensus 270 --------------~~-----------------~~~~~~aa~------------------------aaL~~~~~---~~~ 291 (379)
T TIGR00707 270 --------------GG-----------------NPLACAAAL------------------------AVLEVIEK---ERL 291 (379)
T ss_pred --------------CC-----------------CHHHHHHHH------------------------HHHHHHHh---hhH
Confidence 00 001112221 56666543 346
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCCh
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
.++.+.+.+++++.|.++.. . +.+ .+ . ...|.++.+.+.+ +...+.+.+.++||.++.+
T Consensus 292 ~~~~~~~~~~~~~~l~~~~~------~-~~~-~~-~-~~~g~~~~~~~~~------~~~~~~~~l~~~Gv~v~~~----- 350 (379)
T TIGR00707 292 LENVKEKGDYFKERLEELGK------N-YPN-KE-V-RGKGLMLGIELEA------PCKDIVKKALEKGLLVNCA----- 350 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHh------h-CCC-Cc-c-ccCceEEEEEecC------cHHHHHHHHHHCCcEEeeC-----
Confidence 67888888888888887611 1 000 11 1 1235566676543 2456666677789988631
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+.+.||+|+++..|.||++++++.|++.+
T Consensus 351 -----------------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 351 -----------------------------------GPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred -----------------------------------CCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 23589999999999999999999998753
No 194
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.56 E-value=7.6e-13 Score=143.17 Aligned_cols=163 Identities=16% Similarity=0.242 Sum_probs=119.7
Q ss_pred HHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCcc
Q 006746 174 AMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRL 252 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~ 252 (632)
+.|+.|++++|++++ .|++|+|+++++.+++.++ +++||+|++.. .|+ .....++..|++++.++.+ +++
T Consensus 75 ~lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~~-~~~gd~vli~~P~y~-----~~~~~~~~~g~~~~~v~~~-~~~ 145 (371)
T PRK05166 75 ALREAIAARTGVPAD--RIILGNGSEDLIAVICRAV-LRPGDRVVTLYPSFP-----LHEDYPTMMGARVERVTVT-PDL 145 (371)
T ss_pred HHHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH-----HHHHHHHHcCCeEEEeecC-CCC
Confidence 689999999999865 7999999999999999998 78999977542 443 2244567889999999987 556
Q ss_pred ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEecccc--C-CCCCCC-CCC-CCC
Q 006746 253 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACAL--G-PKDMDS-FGL-SLV 324 (632)
Q Consensus 253 ~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~--~-g~~m~~-ldl-s~~ 324 (632)
.++.+++++.++++ ++++++++.+|+||..+|.+ +.++++. .++++++|.+-. . +....+ +.+ ...
T Consensus 146 ~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 219 (371)
T PRK05166 146 GFDLDALCAAVARA------PRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKAR 219 (371)
T ss_pred CCCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhc
Confidence 78999999988754 38899999999999999987 7666553 478899999732 1 110001 111 111
Q ss_pred -CCcEEEEccccccCCCCCceEEEEEeC
Q 006746 325 -RPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 325 -~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
.--+++.|+-|.||.+---+|++++.+
T Consensus 220 ~~~vi~i~SfSK~~~l~GlRiG~~i~~~ 247 (371)
T PRK05166 220 GLPWIVLRTFSKAYGLAGLRVGYGLVSD 247 (371)
T ss_pred CCCEEEEeechHhhhcchhheeeeecCC
Confidence 123788999999985322368877643
No 195
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.55 E-value=1.5e-12 Score=147.17 Aligned_cols=162 Identities=15% Similarity=0.179 Sum_probs=119.3
Q ss_pred HHHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|++++ +++++ +|++|+|+++++.+++.++ +.+||+|++. ..|+. + ...++..|++++.+
T Consensus 188 ~~lReaia~~~~~~~~~~~~~~--~I~it~G~~eal~~~~~~l-~~~Gd~Vli~~P~y~~--y---~~~~~~~g~~~v~~ 259 (517)
T PRK13355 188 FSARKAIMQYAQLKGLPNVDVD--DIYTGNGVSELINLSMSAL-LDDGDEVLIPSPDYPL--W---TACVNLAGGTAVHY 259 (517)
T ss_pred HHHHHHHHHHHHhcCCCCCChh--HEEEeCcHHHHHHHHHHHh-CCCCCEEEEcCCCCcC--H---HHHHHHCCCEEEEe
Confidence 47899999988 67765 7999999999999999998 7899997754 45553 2 23456789999999
Q ss_pred eccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEecccc----CCCCC
Q 006746 246 EFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACAL----GPKDM 316 (632)
Q Consensus 246 ~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~----~g~~m 316 (632)
+.+.. +..+|+++|+++++++ ++++++...+|+||..+| ++ |+++|+++++++++|.+-. -+..
T Consensus 260 ~~~~~~~~~~d~~~l~~~~~~~------~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~- 332 (517)
T PRK13355 260 RCDEQSEWYPDIDDIRSKITSR------TKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLE- 332 (517)
T ss_pred ecCcccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCC-
Confidence 87632 3568999999988764 488999999999999999 66 7889999999999999732 1211
Q ss_pred CCCCCCCCCCcE---EEEccccccCCCCCceEEEEEe
Q 006746 317 DSFGLSLVRPDF---LICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 317 ~~ldls~~~~Df---~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
...+....+|. ++.|+-|.||.+-.-+|++++.
T Consensus 333 -~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 333 -HTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred -cccHHHhCCCCeEEEEecchhhccCcccceEEEEee
Confidence 11111122342 2378899988532226888864
No 196
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.55 E-value=1.5e-12 Score=143.95 Aligned_cols=280 Identities=18% Similarity=0.176 Sum_probs=189.4
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--CC---C--C-----C-eEEEeccccchhhHHHHHH
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--FM---S--V-----K-NLLTVYDYESEAVEAMIRT 234 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--~~---~--g-----d-~ilt~~d~~s~~v~~~~~~ 234 (632)
...+.+++-..+++++|+++ +..=+||+++|+|.-+...... |. . + . +|+.+..-|. .| ...
T Consensus 99 a~~~E~~~v~~l~~l~~~~~-~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~---s~-~Ka 173 (460)
T COG0076 99 AAELEERVVNMLSDLLGAPE-EASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHF---SF-EKA 173 (460)
T ss_pred HHHHHHHHHHHHHHHhCCCC-CCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchh---HH-HHH
Confidence 45788899999999999984 4567899999999886554432 10 0 1 1 4777765443 13 566
Q ss_pred HHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC-
Q 006746 235 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG- 312 (632)
Q Consensus 235 a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~- 312 (632)
++-.|++++.++.+..+.++|+++++++|++++.. +.|+-+.-.+.+|.+=|++ |.++|++++++++||||-.+
T Consensus 174 a~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~----g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~ 249 (460)
T COG0076 174 ARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIG----GVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGF 249 (460)
T ss_pred HHHhCCCceeEEeccCccccCHHHHHHHHHhhccC----ceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccce
Confidence 77889999999998447899999999999987621 2478888889999999999 99999999999999998444
Q ss_pred --CC--CCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCC-CccccC---CCCCCCceeecccccccccccccCCC
Q 006746 313 --PK--DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS-TVPILV---DNTSSGMVSLLPAKKQLWLTDEFSSC 384 (632)
Q Consensus 313 --g~--~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~-~~~~L~---~~~~gG~v~~~~~~~~~~~~~~~~~~ 384 (632)
+. ....+|...-++|-+++++||++.. |.|+|++++|++ .+.... ..+.+|.. .+.
T Consensus 250 ~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~a-P~~~G~il~rd~e~l~~~~~~~~~yl~~~~--~~~------------- 313 (460)
T COG0076 250 LLPFLEPDGRWDFGLEGVDSITVDGHKYGLA-PIGCGVVLFRDEEALRRILIFADYYLPGGG--IPN------------- 313 (460)
T ss_pred eecccCccchhhcCCCCceEEEECcccccCC-CCCceEEEEECHHHhhhhhhcccccCCCCC--cCc-------------
Confidence 21 1123355556899999999998887 899999999998 332221 11111110 000
Q ss_pred CCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHH
Q 006746 385 ETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLT 464 (632)
Q Consensus 385 ~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~ 464 (632)
+ . ..++ |.|. ..+..+ ..|..+-..|..
T Consensus 314 -~-------t----i~~s------------r~~~---~~~~~~-------------------------~~l~~lG~eGy~ 341 (460)
T COG0076 314 -F-------T----ILGS------------RPGR---QALALY-------------------------ANLRRLGREGYR 341 (460)
T ss_pred -e-------e----Eeec------------cchH---HHHHHH-------------------------HHHHHhCHhHHH
Confidence 0 0 0011 1111 111111 344444345788
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEc
Q 006746 465 MISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLS 539 (632)
Q Consensus 465 ~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr 539 (632)
++.++...+++||.+.|.++ +.+++..+. ..++|+|..++... ........+++.|-.++
T Consensus 342 ~l~~~~~~~a~~la~~l~~~--------~~~e~~~~p----~l~~V~fr~~~~~~---~~~~~~~~~~~~gw~v~ 401 (460)
T COG0076 342 KLLDRTLELARYLAEELEKL--------GDFELVNEP----ELPIVAFRLKDDED---TLADLSERLDRRGWQVP 401 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhC--------CCcEeecCC----ccceEEEEcCCccc---chhchHHHHHhcCceee
Confidence 88999999999999999998 557777753 68999999966321 12222334444565554
No 197
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=1.8e-12 Score=139.98 Aligned_cols=173 Identities=9% Similarity=0.101 Sum_probs=121.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC-CeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCC-
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSV-KNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWP- 250 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g-d~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~- 250 (632)
.+.|+.|++++|++++ +|++|+|+++++.+++..+ ..+| ++|++..-..+ .....++..|++++.++.+.+
T Consensus 62 ~~lr~~ia~~~~~~~~--~I~~t~G~~~~l~~~~~~~-~~~g~~~vlv~~p~y~----~~~~~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 62 PGLRSALAALYGCAPE--QLLIGRGSDEAIDLLVRAL-CVPGRDAVLVTPPVFG----MYAVCARLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHHhCcChH--HEEEeCCHHHHHHHHHHHh-cCCCCCeEEEcCCChH----HHHHHHHHcCCEEEEEecCCCc
Confidence 5899999999999876 7999999999999999998 5677 67765432222 334456778999999997422
Q ss_pred -ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEecccc--CCCCCCCCCC-CC
Q 006746 251 -RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACAL--GPKDMDSFGL-SL 323 (632)
Q Consensus 251 -~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~--~g~~m~~ldl-s~ 323 (632)
...++.+++.+.+.. .+++++.+++.+|+||..+|.+ +.++++. .++++++|.+-. .... ..+.+ ..
T Consensus 135 ~~~~~d~~~l~~~~~~-----~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~-~~~~~~~~ 208 (364)
T PRK04781 135 DGFHADVPAIVAAALA-----SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVP-SAVGLLAR 208 (364)
T ss_pred cCCCcCHHHHHHHHhc-----cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCc-chHHHHhh
Confidence 234678887655432 1358999999999999999998 8777654 478899999732 2210 11111 11
Q ss_pred CCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
.+-=+++.||-|.||.+---+|+++..++.++.+.
T Consensus 209 ~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~ 243 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAAARIGSLIANAELIAVLR 243 (364)
T ss_pred CCCEEEEecChhhcccccceeeeeeCCHHHHHHHH
Confidence 22237889999999963234688888777665443
No 198
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.54 E-value=2.1e-12 Score=141.19 Aligned_cols=163 Identities=12% Similarity=0.120 Sum_probs=119.4
Q ss_pred HHHHHHHHHHcC-----CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 173 SAMKKRIMDFLN-----ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 173 ~~~R~~ia~~l~-----a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.+.|+.|+++++ ++++ .|++|+|+++|+.+++..+ .++||+|++. ..|. .....++..|+++..++
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~v~i~~P~y~-----~~~~~~~~~g~~v~~~~ 147 (401)
T TIGR01264 76 LSAREAIASYYHNPDGPIEAD--DVVLCSGCSHAIEMCIAAL-ANAGQNILVPRPGFP-----LYETLAESMGIEVKLYN 147 (401)
T ss_pred HHHHHHHHHHHhhcCCCCCHH--HEEECcChHHHHHHHHHHh-CCCCCEEEEeCCCCh-----hHHHHHHHcCCEEEEee
Confidence 367888999987 5555 6999999999999999998 5789997654 3333 22455678899999998
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
++.. +..++++++++.+.++ ++++++++.+|+||..++ ++ |+++|+++|+++++|.+-.. +..
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~-- 219 (401)
T TIGR01264 148 LLPDKSWEIDLKQLESLIDEK------TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGAT-- 219 (401)
T ss_pred cCCccCCCCCHHHHHHHhccC------ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcc--
Confidence 7532 4578999998887653 488999999999999997 55 77888999999999987431 111
Q ss_pred CCCCCCCCC---cEEEEccccccCCCCCceEEEEEeC
Q 006746 318 SFGLSLVRP---DFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 318 ~ldls~~~~---Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
...+..... -+++.||-|.||.+--.+|++++.+
T Consensus 220 ~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 220 FEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHD 256 (401)
T ss_pred cccHHHcCCCCcEEEEccCcccCCCccceEEEEEecC
Confidence 111111112 3788999999886323368887754
No 199
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.54 E-value=4.7e-12 Score=138.13 Aligned_cols=337 Identities=9% Similarity=0.083 Sum_probs=202.0
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||.++. |--.+.+++++.+.+..... .+. . + ..+.++.+++.++
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~------------------~~~---~-~---~~~~~~~~~~~l~ 83 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTL------------------TSR---A-F---YNDVLGLAEKYIT 83 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccc------------------ccc---c-c---cCHHHHHHHHHHH
Confidence 56789998753 22477788887654322100 010 0 0 1246678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC--------C-CCCCeEE-EeccccchhhHHHHHHHHhcCCEEE--EEecc
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP--------F-MSVKNLL-TVYDYESEAVEAMIRTSEKRGARVM--SAEFS 248 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~--------~-~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~--~v~~~ 248 (632)
++++.+ .++|++++|+|+..++.... + ..+++|+ ....+|......|. .. .+.... ..+..
T Consensus 84 ~~~~~~----~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~-~~--~~~~~~~~~~~~~ 156 (400)
T PTZ00125 84 DLFGYD----KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACS-AS--TDPKCYNNFGPFV 156 (400)
T ss_pred hCCCCC----EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHh-hc--CCcchhccCCCCC
Confidence 988753 68899999999888776541 1 1234555 55677763333322 11 111110 00100
Q ss_pred C---CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc-CCCC--CC
Q 006746 249 W---PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL-GPKD--MD 317 (632)
Q Consensus 249 ~---~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~g~~--m~ 317 (632)
. .-...|+++|++.+.. +++++|++..+.|.||..+| ++ |.++|+++|+++++|.++. +|.. +.
T Consensus 157 ~~~~~~~~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~ 231 (400)
T PTZ00125 157 PGFELVDYNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL 231 (400)
T ss_pred CCceEeCCCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh
Confidence 0 0001278999988862 24688988888999999998 88 9999999999999999875 3321 11
Q ss_pred CCCCCCCCCcEEEEccccccCCCCC-ceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPS-GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~-G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
..+.....||++++| |.++. +. .+|+++++++.++.+.....+.+ |
T Consensus 232 ~~~~~~~~pd~~~~s--K~l~~-g~~~ig~v~~~~~~~~~~~~~~~~~t----------~-------------------- 278 (400)
T PTZ00125 232 AHDHEGVKPDIVLLG--KALSG-GLYPISAVLANDDVMLVIKPGEHGST----------Y-------------------- 278 (400)
T ss_pred HHHhcCCCCCEEEEc--ccccC-CCcCcEEEEEcHHHHhhccCCCCCCC----------C--------------------
Confidence 233344578998877 97763 32 58999999887765543111100 0
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
.+. ++ ...+. .++|+.+.+.+ +.+|.+.+.++
T Consensus 279 ---~~~-~~-----------------~~~aa------------------------~~~l~~i~~~~---~~~~~~~~~~~ 310 (400)
T PTZ00125 279 ---GGN-PL-----------------ACAVA------------------------VEALEVLKEEK---LAENAQRLGEV 310 (400)
T ss_pred ---CcC-HH-----------------HHHHH------------------------HHHHHHHHhcC---HHHHHHHHHHH
Confidence 000 00 00111 26677776544 45677777888
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhh
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 556 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~ 556 (632)
+++.|.++... .+.+.-. ...|.++.+.+.+.++ .....+.+.+.++||.+..+
T Consensus 311 l~~~l~~l~~~----~~~~~~~-----~~~g~~~~v~~~~~~~--~~~~~~~~~l~~~Gv~v~~~--------------- 364 (400)
T PTZ00125 311 FRDGLKELLKK----SPWVKEI-----RGKGLLNAIVFDHSDG--VNAWDLCLKLKENGLLAKPT--------------- 364 (400)
T ss_pred HHHHHHHHHhc----CCCeEEE-----ecccEEEEEEEccCcc--hHHHHHHHHHHHCCeEEeec---------------
Confidence 88888775211 1222111 1246666666653222 23334444444678887521
Q ss_pred hhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 557 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 557 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+..+||+++++..+.+||+++++.|.++|++
T Consensus 365 -------------------------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 365 -------------------------HDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred -------------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 2358999999999999999999999998764
No 200
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.54 E-value=1.8e-12 Score=141.77 Aligned_cols=174 Identities=10% Similarity=0.084 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
++.+.+.+.+++.+|.+-+...|++|+|+++|+.+++.++ +.+||.|++.. .|.. .. . .....|+++..++.+
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~vl~~~p~y~~-y~-~---~~~~~~~~~~~v~~~ 147 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMAT-LEAGDEVIIPAPYWVS-YP-D---MVLANDGTPVIVACP 147 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh-cCCCCEEEEecCCCcC-HH-H---HHHHcCCEEEEecCC
Confidence 4555666666667676422337999999999999999887 78999977543 3332 22 2 224457777777775
Q ss_pred C-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhC-CcEEEEeccccC----CC---C
Q 006746 249 W-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQEN-DWHILIDACALG----PK---D 315 (632)
Q Consensus 249 ~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~-g~~vlvDaaq~~----g~---~ 315 (632)
. .+..++.+++++++.++ ++++.++..+|+||..+|.+ |+++|+++ |+++++|-+-.- +. .
T Consensus 148 ~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~ 221 (402)
T PRK06107 148 EEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPH 221 (402)
T ss_pred cccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCC
Confidence 2 23457889999887643 47888899999999999875 56778897 999999975321 11 0
Q ss_pred CCCCCCCCCCCcEEEEccccccCCCCCce--EEEEEeCCCcccc
Q 006746 316 MDSFGLSLVRPDFLICSFYQIFGENPSGF--GCLFVKKSTVPIL 357 (632)
Q Consensus 316 m~~ldls~~~~Df~~~S~hK~~G~~P~G~--G~L~Vr~~~~~~L 357 (632)
+..++-....--+++.|+.|.||. +|+ |+++..++.++.+
T Consensus 222 ~~~~~~~~~~~vi~~~S~SK~~~~--pGlRiG~~~~~~~~~~~~ 263 (402)
T PRK06107 222 LLAAAPELRDRVLVTNGVSKTYAM--TGWRIGYAAGPADLIAAI 263 (402)
T ss_pred HHHhCcCccCCEEEEeccchhhcC--cccceeeeecCHHHHHHH
Confidence 111111111235788899999984 365 8888776655443
No 201
>PRK09082 methionine aminotransferase; Validated
Probab=99.53 E-value=1.4e-12 Score=141.77 Aligned_cols=174 Identities=14% Similarity=0.197 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHcCCCCCC-ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 170 GLESAMKKRIMDFLNISEND-YGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~e-y~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.+.+.+.+.++++.+.+. ..|++|+|+|+|+.+++.++ ..+||+|++.. .|.+ . ...++..|++++.++.
T Consensus 71 ~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~Vli~~p~y~~-~----~~~~~~~g~~~~~~~~ 144 (386)
T PRK09082 71 ALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL-VRPGDEVIVFDPSYDS-Y----APAIELAGGRAVRVAL 144 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCCchh-h----HHHHHHcCCEEEEEec
Confidence 45566677777778876433 26999999999999999998 68999977554 4443 2 3344567999999999
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CC-CCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PK-DMDS 318 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~-~m~~ 318 (632)
+..+..++++++++++.++ +++++++..+|+||..++ ++ |+++|+++|+++++|.+... +. ....
T Consensus 145 ~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~ 218 (386)
T PRK09082 145 QPPDFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASV 218 (386)
T ss_pred CcccccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCCh
Confidence 7556678999999988653 488999999999999865 55 68899999999999997421 11 0011
Q ss_pred CCCC-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 319 FGLS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 319 ldls-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
..+. ..+-.+++.|+.|.||. | | +|+++..++.++.+
T Consensus 219 ~~~~~~~~~~i~~~S~SK~~~~-~-G~RiG~iv~~~~l~~~~ 258 (386)
T PRK09082 219 LRHPELRERAFVVSSFGKTYHV-T-GWKVGYCVAPAALSAEF 258 (386)
T ss_pred hhCcCccCcEEEEeechhhccc-h-hhhhhhhhCCHHHHHHH
Confidence 1121 12456899999999985 3 6 68888766554433
No 202
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.53 E-value=3.5e-12 Score=138.64 Aligned_cols=168 Identities=18% Similarity=0.189 Sum_probs=118.4
Q ss_pred HHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ +++++ .|++|+|+++|+.+++.++ ..+||+|++.. .|+. ....++..|++++.++
T Consensus 70 ~lr~~ia~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~~-----~~~~~~~~g~~~~~~~ 141 (384)
T PRK06348 70 ELIEEIIKYYSKNYDLSFKRN--EIMATVGACHGMYLALQSI-LDPGDEVIIHEPYFTP-----YKDQIEMVGGKPIILE 141 (384)
T ss_pred HHHHHHHHHHHHHhCCCCChh--hEEEcCChHHHHHHHHHHh-cCCCCEEEEeCCCCcc-----hHHHHHHcCCEEEEec
Confidence 5677777766 35554 7999999999999999998 78999987643 3332 2344566799988887
Q ss_pred ccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccC---CCCCCC
Q 006746 247 FSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALG---PKDMDS 318 (632)
Q Consensus 247 ~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~---g~~m~~ 318 (632)
... .+..+++++|++++.++ ++++.++..+|+||..++. + |+++|+++|+++++|-+-.. .....+
T Consensus 142 ~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 215 (384)
T PRK06348 142 TYEEDGFQINVKKLEALITSK------TKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVP 215 (384)
T ss_pred CCcCcCCcCCHHHHHHhhCcC------ccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccc
Confidence 642 33458999999988653 4788888899999999984 4 67788999999999987432 111011
Q ss_pred -CCCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCcc
Q 006746 319 -FGLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 319 -ldls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
..+.. .+-.+++.|+-|.+|.+---+|+++..+..++
T Consensus 216 ~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~ 254 (384)
T PRK06348 216 MATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIE 254 (384)
T ss_pred hhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHH
Confidence 11111 22358888999998853234688887665543
No 203
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.53 E-value=1.5e-12 Score=140.81 Aligned_cols=163 Identities=12% Similarity=0.120 Sum_probs=121.4
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+.......++.+++++++.|++. .++++|+++|+.++.. + +++||+|++. ..|++ ....+...+++.|+++
T Consensus 46 y~r~~~pt~~~le~~la~l~g~~~----~~~~~sG~~ai~~~~~-l-l~~Gd~Vl~~~~~y~~-t~~~~~~~~~~~G~~v 118 (366)
T PRK08247 46 YSRTGNPTRGVLEQAIADLEGGDQ----GFACSSGMAAIQLVMS-L-FRSGDELIVSSDLYGG-TYRLFEEHWKKWNVRF 118 (366)
T ss_pred ccCCCCchHHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHH-H-hCCCCEEEEecCCcCc-HHHHHHHHhhccCceE
Confidence 333333456789999999999963 3667788999998764 4 5789997754 45654 3333455667799999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++. .|+++++++++++ ++++.+...+|++|...+++ |+++|+++|+++++|.+...+....++
T Consensus 119 ~~vd~------~d~~~l~~~i~~~------tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-- 184 (366)
T PRK08247 119 VYVNT------ASLKAIEQAITPN------TKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-- 184 (366)
T ss_pred EEECC------CCHHHHHHhcccC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch--
Confidence 88865 3778899888764 48999999999999999999 999999999999999997655421233
Q ss_pred CCCCCcEEEEccccccCCCCCc-eEEEEE
Q 006746 322 SLVRPDFLICSFYQIFGENPSG-FGCLFV 349 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G-~G~L~V 349 (632)
.++.|+++.|+.|++|. +.+ .|.+++
T Consensus 185 -~~g~di~i~S~sK~~~g-~~d~~~G~iv 211 (366)
T PRK08247 185 -EEGADIVIHSATKYLGG-HNDVLAGLVV 211 (366)
T ss_pred -hcCCcEEEeecceeccC-CCceeeeEEe
Confidence 35789999999998773 444 344444
No 204
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.52 E-value=2.6e-12 Score=140.99 Aligned_cols=163 Identities=11% Similarity=0.170 Sum_probs=118.0
Q ss_pred HHHHHHHHHHcC------------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcC
Q 006746 173 SAMKKRIMDFLN------------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 173 ~~~R~~ia~~l~------------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G 239 (632)
.+.|+.|+++++ ++++ .|++|+|+++|+.+++..+ ..+||+|++.. .|+. ....++..|
T Consensus 78 ~~Lr~aia~~~~~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~P~y~~-----~~~~~~~~g 149 (412)
T PTZ00433 78 PEAREAVATYWRNSFVHKESLKSTIKKD--NVVLCSGVSHAILMALTAL-CDEGDNILVPAPGFPH-----YETVCKAYG 149 (412)
T ss_pred HHHHHHHHHHHHhhccccccccCCCChh--hEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCccc-----HHHHHHHcC
Confidence 367888888876 4444 7999999999999999998 68999977543 4442 234567789
Q ss_pred CEEEEEeccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC--
Q 006746 240 ARVMSAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG-- 312 (632)
Q Consensus 240 ~~v~~v~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~-- 312 (632)
+++..++.+. .+..+++++|++.+.++ ++++++++.+|+||..++.+ |+++|+++|+++++|.+..-
T Consensus 150 ~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 150 IEMRFYNCRPEKDWEADLDEIRRLVDDR------TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred CEEEEEecCccccCcCCHHHHHHHhccC------ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 9999999862 23468999998887653 48889999999999999854 57888999999999997431
Q ss_pred --CCCCCC-CCCCCCCCcEEEEccccccCCCCCceEEEEE
Q 006746 313 --PKDMDS-FGLSLVRPDFLICSFYQIFGENPSGFGCLFV 349 (632)
Q Consensus 313 --g~~m~~-ldls~~~~Df~~~S~hK~~G~~P~G~G~L~V 349 (632)
+....+ ..+.....=+++.|+-|.||.+-..+|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEE
Confidence 110001 1121111236788999999864345688776
No 205
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.52 E-value=5.8e-12 Score=135.69 Aligned_cols=304 Identities=15% Similarity=0.163 Sum_probs=197.2
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhc
Q 006746 159 KTQLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKR 238 (632)
Q Consensus 159 ~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~ 238 (632)
.++..+|. .++..+..+++++|+|++. .++|+++-..-+- +..++ .+++|-|+.+...|...+.+ ++..
T Consensus 75 gsR~i~G~--~~~h~~LE~~lA~f~g~e~---al~f~SGy~AN~~-~i~~l-~~~~dli~~D~lnHASiidG----~rls 143 (388)
T COG0156 75 GSRLISGT--SDLHVELEEELADFLGAEA---ALLFSSGFVANLG-LLSAL-LKKGDLIFSDELNHASIIDG----IRLS 143 (388)
T ss_pred CcCcccCC--cHHHHHHHHHHHHHhCCCc---EEEEcccchhHHH-HHHHh-cCCCcEEEEechhhhhHHHH----HHhC
Confidence 44444554 3677789999999999973 6888866655444 44445 35677777776555534444 4556
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC--
Q 006746 239 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-- 315 (632)
Q Consensus 239 G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-- 315 (632)
+++++...- .|+++|++.|.+......+.+++++..+-++.|..-||. |+++++++|.+++||=|+++|.-
T Consensus 144 ~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~ 217 (388)
T COG0156 144 RAEVRRFKH------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGP 217 (388)
T ss_pred CCcEEEecC------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCC
Confidence 788877654 478999999987321111568999999999999999999 99999999999999999988641
Q ss_pred -----CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 316 -----MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 316 -----m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
...+++....+|+++.++-|.|| +.|..+.-. .+.+-|...-. .+
T Consensus 218 ~GrG~~e~~g~~~~~vdi~~gTlsKAlG----s~Gg~v~g~~~~~d~L~~~ar-----------~~-------------- 268 (388)
T COG0156 218 NGRGLAEHFGLEPEEVDIIVGTLGKALG----SSGGYIAGSAALIDYLRNRAR-----------PF-------------- 268 (388)
T ss_pred CCccHHHHhCCCCccceEEEEEchhhhc----ccCceeeCcHHHHHHHHHhCC-----------ce--------------
Confidence 11345555567999999999999 455555433 33332321100 00
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 469 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r 469 (632)
.| -.+.+|.. ..+. .++|+++.+ -....+|
T Consensus 269 ----if---StalpP~~-----------------aaa~------------------------~~al~~l~~--~~~~r~~ 298 (388)
T COG0156 269 ----IF---STALPPAV-----------------AAAA------------------------LAALRILEE--GPERRER 298 (388)
T ss_pred ----ec---cCCCCHHH-----------------HHHH------------------------HHHHHHHHh--CHHHHHH
Confidence 00 00111110 0111 167777764 2566788
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHH
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~ 549 (632)
++.++.+++..+..+ |.+. .+ ...+|+.+.+.|.. ...+.-..++++ ||.++... .|
T Consensus 299 L~~~~~~~~~~~~~~------~~~~----~~----s~s~I~pv~~gd~~---~a~~~s~~l~~~-Gi~v~~i~--~P--- 355 (388)
T COG0156 299 LQELAAFFRSLLKAL------GLVL----LP----SESPIIPVILGDEE---RALEASRALLEE-GIYVSAIR--PP--- 355 (388)
T ss_pred HHHHHHHHHHHHHhc------CCcc----CC----CCCCeeeeEeCCHH---HHHHHHHHHHHC-CeeEeeec--CC---
Confidence 889999998666665 3221 22 35788888887631 112222344554 98886431 11
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
. -+.+...+|+++...+|.+||+++++.+.+.
T Consensus 356 --------------------T--------Vp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 356 --------------------T--------VPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred --------------------C--------CCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 0 1234568999999999999999999998764
No 206
>PLN02187 rooty/superroot1
Probab=99.51 E-value=5.5e-12 Score=140.50 Aligned_cols=164 Identities=12% Similarity=0.129 Sum_probs=119.5
Q ss_pred HHHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|+++++ ++++ .|++|+|+++|+.+++.++ .++||+|++. ..|+. + ...++..|++++.+
T Consensus 111 ~~lR~aiA~~~~~~~~~~~~~~--~I~it~G~~~al~~~~~~l-~~pGd~Vlv~~P~y~~--y---~~~~~~~g~~~~~~ 182 (462)
T PLN02187 111 LPARRAVADYMNRDLPHKLTPE--DIFLTAGCNQGIEIVFESL-ARPNANILLPRPGFPH--Y---DARAAYSGLEVRKF 182 (462)
T ss_pred HHHHHHHHHHHHHhcCCCCCcc--cEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcc--H---HHHHHHcCCEEEEE
Confidence 468888888874 5655 7999999999999999999 7899997754 45553 2 33467789999999
Q ss_pred eccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCC
Q 006746 246 EFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDM 316 (632)
Q Consensus 246 ~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m 316 (632)
+... .+..+|+++|+++++++ ++++++++.+|+||..++ ++ |+++|+++|+++|+|.+-.- +...
T Consensus 183 ~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~ 256 (462)
T PLN02187 183 DLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPF 256 (462)
T ss_pred eCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 8742 34578999999887654 488999999999999998 55 77888999999999996321 2100
Q ss_pred CCC-CCCCCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 317 DSF-GLSLVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 317 ~~l-dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
.++ .+.....=+++.|+-|.|+.+---+|++++.
T Consensus 257 ~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~ 291 (462)
T PLN02187 257 VSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALN 291 (462)
T ss_pred eeHHHhccCCcEEEEecchhhcCCccceeEEEEec
Confidence 111 1111112367789999988643446887763
No 207
>PLN02656 tyrosine transaminase
Probab=99.50 E-value=3.4e-12 Score=140.05 Aligned_cols=164 Identities=11% Similarity=0.084 Sum_probs=117.8
Q ss_pred HHHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.++++++ ++++ +|++|+|+++|+.+++..+ .++||+|++. ..|+. + ...++..|++++.+
T Consensus 76 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~---~~~~~~~g~~~~~i 147 (409)
T PLN02656 76 PQARRAIAEYLSRDLPYKLSLD--DVFITSGCTQAIDVALSML-ARPGANILLPRPGFPI--Y---ELCAAFRHLEVRYV 147 (409)
T ss_pred HHHHHHHHHHHHHhcCCCCCcc--cEEEeCChHHHHHHHHHHH-hCCCCeEEEeCCCCCc--H---HHHHHHcCCEEEEE
Confidence 367888888774 4444 7999999999999999998 6899997754 45542 2 23455689999999
Q ss_pred eccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCC
Q 006746 246 EFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDM 316 (632)
Q Consensus 246 ~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m 316 (632)
+.+.. +..++.++++++++++ ++++++++.+|+||..++ ++ |+++|+++|+++++|.+-.- +...
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 221 (409)
T PLN02656 148 DLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPF 221 (409)
T ss_pred eCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCc
Confidence 98533 3468999999888654 378899999999999985 55 78889999999999997431 2110
Q ss_pred CCC-CCCCCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 317 DSF-GLSLVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 317 ~~l-dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
.++ .+.....=+++.||-|.|+.+---+|+++..
T Consensus 222 ~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~ 256 (409)
T PLN02656 222 VPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTT 256 (409)
T ss_pred ccHHHhcccCcEEEEcccchhccCcceeEEEEEEe
Confidence 111 1111223478899999888643456888764
No 208
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.50 E-value=1.1e-11 Score=137.03 Aligned_cols=164 Identities=13% Similarity=0.100 Sum_probs=119.7
Q ss_pred HHHHHHHHHHcCC------CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFLNI------SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l~a------~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|+++++. +++ +|++|+|+|+|+.+++..+ ..+||+|++. ..|+. + ...+...|++++.+
T Consensus 97 ~~lr~aia~~~~~~~~~~~~~~--~v~it~G~~~al~l~~~~l-~~~Gd~Vlv~~P~y~~--y---~~~~~~~g~~~~~~ 168 (430)
T PLN00145 97 LPARRAIAEYLSRDLPYELSTD--DIYLTAGCAQAIEIIMSVL-AQPGANILLPRPGYPL--Y---EARAVFSGLEVRHF 168 (430)
T ss_pred HHHHHHHHHHHhhccCCCCChh--hEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcc--H---HHHHHHcCCEEEEe
Confidence 4788888888853 444 7999999999999999999 6899997754 35543 1 23456689999998
Q ss_pred eccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCC
Q 006746 246 EFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDM 316 (632)
Q Consensus 246 ~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m 316 (632)
++.. .+..+|++++++++++++ +++++.+.+|+||..+| ++ |+++|+++|+++++|.+-.. +...
T Consensus 169 ~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~ 242 (430)
T PLN00145 169 DLLPERGWEVDLEGVEALADENT------VAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPF 242 (430)
T ss_pred eCCcccCCcCCHHHHHHHhCcCc------eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCc
Confidence 8642 345789999998887654 88999999999999999 56 77889999999999986321 1100
Q ss_pred CCC-CCCCCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 317 DSF-GLSLVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 317 ~~l-dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
.++ .++....=+++.|+-|.|+.+---+|++++.
T Consensus 243 ~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~ 277 (430)
T PLN00145 243 VPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATC 277 (430)
T ss_pred cchhhhcccCcEEEEeccccccCCCCeeEEEEEEe
Confidence 121 1222234488899999888643446777763
No 209
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=3e-12 Score=138.27 Aligned_cols=169 Identities=11% Similarity=0.143 Sum_probs=122.2
Q ss_pred HHHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|++++ +++++ .|++|+|+++++.+++..+ .++||.|++. ..|+. ....++..|+++..+
T Consensus 68 ~~lr~aia~~~~~~~~~~~~~~--~I~it~G~~~~l~~~~~~~-~~~gd~v~v~~P~y~~-----~~~~~~~~g~~~~~~ 139 (368)
T PRK03317 68 VALRADLAAYLTAQTGVGLTVE--NVWAANGSNEILQQLLQAF-GGPGRTALGFVPSYSM-----HPIIARGTHTEWVEG 139 (368)
T ss_pred HHHHHHHHHHhhhhccCCCChh--hEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCChHH-----HHHHHHhcCCeeEEc
Confidence 46888888888 45655 7999999999999999998 5889997653 34432 234456788888887
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC-CCC--CCCCCC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG-PKD--MDSFGL 321 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~-g~~--m~~ldl 321 (632)
+.+ ++..++++++++++.+. +++++.++...|+||..+|.+ +.++++..++++++|-+... ..+ ...+.+
T Consensus 140 ~~~-~~~~~d~~~l~~~~~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~ 213 (368)
T PRK03317 140 PRA-ADFTLDVDAAVAAIAEH-----RPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTL 213 (368)
T ss_pred ccC-CCCCCCHHHHHHHHhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHH
Confidence 765 45568999999988742 247888889999999999999 99999888999999997642 110 011111
Q ss_pred CCCCCc-EEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 322 SLVRPD-FLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 322 s~~~~D-f~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
....++ +++.|+-|.+|. | | +|+++.+++.++.+
T Consensus 214 ~~~~~~~i~~~SfSK~~g~-~-GlRiG~~~~~~~~~~~l 250 (368)
T PRK03317 214 LPEYPRLVVSRTMSKAFAF-A-GGRLGYLAAAPAVVDAL 250 (368)
T ss_pred HHhCCCEEEEEechhhhcc-c-hhhhhhhhCCHHHHHHH
Confidence 111234 567799999985 3 5 58888776665544
No 210
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=7.4e-12 Score=135.49 Aligned_cols=167 Identities=10% Similarity=0.157 Sum_probs=119.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.|+++++++++ +|++|+|+++++.++...+ .++||.|++.. .|+. . ...++..|++++.+|.+ .+
T Consensus 70 ~~Lr~~ia~~~~~~~~--~I~it~G~~~~l~~~~~~~-~~~gd~vlv~~p~y~~--~---~~~~~~~g~~~~~vp~~-~~ 140 (369)
T PRK08153 70 HDLRHALAAHHGVAPE--NIMVGEGIDGLLGLIVRLY-VEPGDPVVTSLGAYPT--F---NYHVAGFGGRLVTVPYR-DD 140 (369)
T ss_pred HHHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEECCCcchH--H---HHHHHHcCCeEEEeeCC-CC
Confidence 5899999999999876 7999999999999999987 68899987643 4543 1 22345679999999985 33
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEeccccC-CCC--CCCCCCCCCC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACALG-PKD--MDSFGLSLVR 325 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~-g~~--m~~ldls~~~ 325 (632)
.++.+++.+.+... +++++.++..+|+||..+|.+ +.++++. .|+++|+|-+-.. ..+ ..+++ ...+
T Consensus 141 -~~~~~~l~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~-~~~~ 213 (369)
T PRK08153 141 -REDLDALLDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPID-TDDP 213 (369)
T ss_pred -CCCHHHHHHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhh-hcCC
Confidence 47888887666432 358898999999999999998 7666643 3889999987321 110 11221 1122
Q ss_pred CcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 326 PDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
--+++.||-|.||.+ | +|+++..++.++.+
T Consensus 214 ~~i~~~SfSK~~g~~--GlRiG~~v~~~~~~~~l 245 (369)
T PRK08153 214 NVIRMRTFSKAYGLA--GARVGYAIGAPGTIKAF 245 (369)
T ss_pred CEEEEecchHhccCc--chheeeeecCHHHHHHH
Confidence 247889999999853 6 58888776655433
No 211
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.49 E-value=1.8e-12 Score=139.12 Aligned_cols=297 Identities=17% Similarity=0.150 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEE
Q 006746 172 ESAMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 172 ~~~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
..+.|+.|+++++ .+++ ..|++|+++.+++.++...+...+|+.|++.. .|+ .+.+.++..|++++.
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~-----~~~~~~~~~g~~~~~ 119 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPE-ANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYP-----SYIEAARLLGAEVIP 119 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGG-EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSST-----HHHHHHHHTTSEEEE
T ss_pred hHHHHHHHHHHhhhccCcccccc-eEEEEecccccchhhhhhcccccccccceecCCccc-----cccccccccCceeee
Confidence 3589999999999 5543 36999999999999988887556889877654 443 234567788999999
Q ss_pred Eecc-CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHH---HhhCCcEEEEeccccCCCCCC--
Q 006746 245 AEFS-WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRI---AQENDWHILIDACALGPKDMD-- 317 (632)
Q Consensus 245 v~~~-~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~---a~~~g~~vlvDaaq~~g~~m~-- 317 (632)
++++ ..+..+++++|++.+++...+..+++++.++...|+||..+|.+ +.++ |+++|+++++|-+...... .
T Consensus 120 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~-~~~ 198 (363)
T PF00155_consen 120 VPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIF-GDP 198 (363)
T ss_dssp EEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBS-SSS
T ss_pred ccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceecccc-CCC
Confidence 9865 24567899999999987321111468999999999999999988 7666 9999999999998665221 1
Q ss_pred -----CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 318 -----SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 318 -----~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
...+......+++.|+-|.||.+-..+|++++.++.++.+..... .|
T Consensus 199 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~------------~~---------------- 250 (363)
T PF00155_consen 199 DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQR------------SG---------------- 250 (363)
T ss_dssp HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHH------------HT----------------
T ss_pred ccCcccccccccccceeeeeccccccccccccccccchhhhhhhhhhccc------------cc----------------
Confidence 112222222599999999999521238999997766544432100 00
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh--CHHHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL--GLTMISRRG 470 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~--Gl~~I~~r~ 470 (632)
.. ..+ .-..+. ..+...... =++.+.++.
T Consensus 251 ---------~~--~~~--------------~~~~~~------------------------~~l~~~~~~~~~~~~~~~~l 281 (363)
T PF00155_consen 251 ---------LS--SSP--------------MQAAAA------------------------AALSDPELVEKWLEELRERL 281 (363)
T ss_dssp ---------TS--SHH--------------HHHHHH------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred ---------cc--cch--------------hhHHHH------------------------HhhhcccccccccccchhhH
Confidence 00 000 000000 222222111 246677778
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHh
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~ 550 (632)
+...+++.+.|.++ | +.++++ .++++.+...+.. -..++.++|+++.||.+..|...
T Consensus 282 ~~~~~~l~~~L~~~------~---~~~~~~-----~~~~~~~~~~~~~---~~~~l~~~L~~~~gi~v~pg~~~------ 338 (363)
T PF00155_consen 282 RENRDLLREALEEI------G---ITVLPP-----EAGFFLWVRLDPN---DAEELAQELLEEYGILVRPGSYF------ 338 (363)
T ss_dssp HHHHHHHHHHHHHT------T---SEEEHH-----SBSSEEEEEESHH---HHHHHHHHHHHHHTEEEEEGGGG------
T ss_pred HHHHHHHHHHHHHh------h---hheeec-----cCccEEEEEcccc---hHHHHHHHHHHhCCEEEEecCCC------
Confidence 88888888888876 3 445544 2666666554411 12456677777779999866210
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHH
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 606 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l 606 (632)
.. .+.||+|+ -..+.|+++++++.|
T Consensus 339 -----------------------------~~-~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 339 -----------------------------GV-PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp -----------------------------TS-TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred -----------------------------CC-CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 11 56999999 889999999999865
No 212
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.49 E-value=7.4e-12 Score=135.58 Aligned_cols=216 Identities=18% Similarity=0.159 Sum_probs=143.0
Q ss_pred ceEeecCCCCCCCHHHHHHHhc-CCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQES-SPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE 187 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~-~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~ 187 (632)
.-|+.|-..++-+.+++..+.. .++. |.... ..+-...+++.++-+.+++++|.+.
T Consensus 40 P~~~~~~~~~~~~~~i~~~~l~~~~n~----------------------n~~~~-~~~P~~~~~E~~vi~~l~~l~g~~~ 96 (373)
T PF00282_consen 40 PRFFGFVPGGPSPASILADLLASALNQ----------------------NGFTW-EASPAATEIEREVIRWLADLFGLPE 96 (373)
T ss_dssp TTBESSSHT--CHHHHHHHHHHHHHT-----------------------BTTST-TTSHHHHHHHHHHHHHHHHHTTGSG
T ss_pred hhHhhhccCCccHHHHHHHHHHhhhcc----------------------ccccc-ccccccccchHHHHHHHHHHhCCcc
Confidence 4588888888888888776432 2211 11000 0111246788899999999999983
Q ss_pred C-----CccEEEeCCHHHHHHHHHhhCC-----------CCCCCe--EEEeccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 188 N-----DYGMVFTANRTSAFKLLAESYP-----------FMSVKN--LLTVYDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 188 ~-----ey~vvft~naT~al~lv~~sl~-----------~~~gd~--ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
+ +-.=+||+++|+++-....+.. .....+ |+++.+-|. .+...+.-.|+.++.||.+
T Consensus 97 ~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~----S~~Kaa~~lGlg~~~I~~~- 171 (373)
T PF00282_consen 97 SFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHY----SIEKAARILGLGVRKIPTD- 171 (373)
T ss_dssp GTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-T----HHHHHHHHTTSEEEEE-BB-
T ss_pred cccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccccc----HHHHhcceeeeEEEEecCC-
Confidence 2 2357899999999864432211 010223 344443333 2245677789999999999
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC----CCCCCCCCCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK----DMDSFGLSLV 324 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~----~m~~ldls~~ 324 (632)
++++++.++|+++|.+.......+-+|+.+.-++.+|..=|++ |.++|++++++++||||-.+.. .+..+....-
T Consensus 172 ~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~ 251 (373)
T PF00282_consen 172 EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIE 251 (373)
T ss_dssp TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGG
T ss_pred cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccccccccccccc
Confidence 6889999999999976432222345789999999999999999 9999999999999999754411 1223333445
Q ss_pred CCcEEEEccccccCCCCCceEEEEEeCCC
Q 006746 325 RPDFLICSFYQIFGENPSGFGCLFVKKST 353 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~ 353 (632)
++|-+++++|||++. |.++|++++|+..
T Consensus 252 ~adSit~d~HK~l~~-P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 252 RADSITIDPHKWLGV-PYGCGVLLVRDKS 279 (373)
T ss_dssp GESEEEEETTTTTS--SSS-EEEEESSGG
T ss_pred cccccccchhhhhcC-CccceeEEeeccc
Confidence 789999999999998 9999999999875
No 213
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.48 E-value=1.6e-12 Score=140.93 Aligned_cols=283 Identities=14% Similarity=0.110 Sum_probs=180.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+.++.+.+|+++|++. ....|+++|.++..++.++ .++||+||+.-..|-+++..|. -.|+++++++..
T Consensus 65 ~G~I~eAe~~aA~~fGAd~---t~flvnGsT~g~~a~i~a~-~~~gd~VLv~RN~HkSv~~ali----l~ga~Pvyi~p~ 136 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADK---TFFLVNGSTSGNQAMIMAL-CRPGDKVLVDRNCHKSVYNALI----LSGAIPVYIPPE 136 (417)
T ss_dssp BTHHHHHHHHHHHHHTESE---EEEESSHHHHHHHHHHHHH-TTTTCEEEEETT--HHHHHHHH----HHTEEEEEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCe---EEEEecCchHHHHHHHHHh-cCCCCEEEEcCCcHHHHHHHHH----HcCCeEEEecCC
Confidence 3678899999999999974 5778899999999999888 7899999887665543555543 469999999764
Q ss_pred CCc----cccCH-----HHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC--CCCC
Q 006746 249 WPR----LRINS-----EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG--PKDM 316 (632)
Q Consensus 249 ~~~----~~i~~-----~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~--g~~m 316 (632)
.+. +.++. ++|+++|.+... .+.+++++++..+ .-|+.++++ |+++|+++|+.++||.|+.+ +..-
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~-~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~ 214 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPD-AKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHP 214 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTT-CHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSG
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCcc-ccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCC
Confidence 221 23455 999999987532 1236678877764 689999999 99999999999999998765 2211
Q ss_pred CCCCCCCCCCc-------EEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 317 DSFGLSLVRPD-------FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 317 ~~ldls~~~~D-------f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
.+-+-...++| +++-|.||.++. -+-.+.|.++.+.. +...
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL~a-ltQts~lh~~~~~~--v~~~----------------------------- 262 (417)
T PF01276_consen 215 LPRSALALGADRPNDPGIIVVQSTHKTLPA-LTQTSMLHVKGDRI--VDHE----------------------------- 262 (417)
T ss_dssp GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCC--TTHH-----------------------------
T ss_pred CccchhhccCccccccceeeeechhhcccc-cccceEEEecCCCc--ccHH-----------------------------
Confidence 23334456889 999999997776 78899999998752 1000
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHH-HhhCHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQV-DSLGLTMISR 468 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~-~~~Gl~~I~~ 468 (632)
++.+.. ...+...|..+.+.+|+ .|.+++ ...| ....+
T Consensus 263 ----~~~~~l------------~~~~TTSPSY~lmASlD------------------------~a~~~m~~~~G-~~l~~ 301 (417)
T PF01276_consen 263 ----RVNEAL------------SMHQTTSPSYPLMASLD------------------------VARAQMEEEEG-RELLE 301 (417)
T ss_dssp ----HHHHHH------------HHHS-SS--HHHHHHHH------------------------HHHHHHSHHHH-HHHHH
T ss_pred ----HHHHHH------------HHHcCCChHHHHHHHHH------------------------HHHHHHhhhhh-HHHHH
Confidence 000000 00012235556677776 676676 4444 45556
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCC-------------------------CcEEEEEEc--cCCCC-
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR-------------------------GPALAFNVF--DWKRE- 520 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~r-------------------------g~ivaFnv~--~~~G~- 520 (632)
+...++..++++|.+++ ..+.+++++|+.-... ..=|+++++ |.+|+
T Consensus 302 ~~i~~a~~~R~~i~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~ 376 (417)
T PF01276_consen 302 EAIELAEEFRKKINRLN-----DIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGEL 376 (417)
T ss_dssp HHHHHHHHHHHHHHHHC-----CT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB
T ss_pred HHHHHHHHHHHHHHhcC-----CCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCcc
Confidence 67777888888885542 1356777777521110 122455553 23433
Q ss_pred ---ccCHHHHHHHHHhCCcEEc
Q 006746 521 ---KIEPVLVQKLADRENISLS 539 (632)
Q Consensus 521 ---~i~~~~V~kla~~~gI~lr 539 (632)
-|+..+|.+.+.++||.+-
T Consensus 377 ~~~Gi~g~~~~~~L~~~~I~~E 398 (417)
T PF01276_consen 377 SELGIPGYIVEKYLREHGIQVE 398 (417)
T ss_dssp -SS---HHHHHHHHHHTTEE-S
T ss_pred cccCCCHHHHHHHHHHcCCEEE
Confidence 2788889998888899873
No 214
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.48 E-value=7e-12 Score=140.74 Aligned_cols=171 Identities=14% Similarity=0.170 Sum_probs=118.8
Q ss_pred HHHHHHHHHcC--------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHH-hcCCEEE
Q 006746 174 AMKKRIMDFLN--------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSE-KRGARVM 243 (632)
Q Consensus 174 ~~R~~ia~~l~--------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~-~~G~~v~ 243 (632)
+.|+.|+++++ ++|+ .|++|+|+++|+.+++.++ ..+||.|++.. .|+. + ...++ +.|++++
T Consensus 98 ~LR~aiA~~l~~~~g~~v~v~pe--~Ivit~Ga~~al~~l~~~l-~~pGD~Vlv~~P~Y~~--~---~~~~~~~~G~~vv 169 (496)
T PLN02376 98 KFRQAIAHFMGKARGGKVTFDPE--RVVMSGGATGANETIMFCL-ADPGDVFLIPSPYYAA--F---DRDLRWRTGVEII 169 (496)
T ss_pred HHHHHHHHHHHHHhCCCCcCChh--hEEEccchHHHHHHHHHHh-CCCCCEEEECCCCccc--h---HHHHHhhCCCEEE
Confidence 57777777765 5665 7999999999999999999 68999987654 4442 1 12223 5799999
Q ss_pred EEeccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC----CC
Q 006746 244 SAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PK 314 (632)
Q Consensus 244 ~v~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~----g~ 314 (632)
.++.+. .+..++.+.+++++....+...+++++.++..+|+||..+|.+ |++.|+++|+++|+|-+... +.
T Consensus 170 ~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~ 249 (496)
T PLN02376 170 PVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGG 249 (496)
T ss_pred EEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC
Confidence 999853 2356889998877643211123578888999999999999965 56788999999999986432 21
Q ss_pred CCCC---C----CCCCCCCc--EEEEccccccCCCCCceEEEEEeCC
Q 006746 315 DMDS---F----GLSLVRPD--FLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 315 ~m~~---l----dls~~~~D--f~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
...+ + |....++| .++.|+.|.||.+---+|+++..++
T Consensus 250 ~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~ 296 (496)
T PLN02376 250 DFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 296 (496)
T ss_pred CcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH
Confidence 1111 1 11111234 3468999999864345788887543
No 215
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.48 E-value=5.2e-12 Score=136.35 Aligned_cols=351 Identities=14% Similarity=0.118 Sum_probs=198.2
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccch--hHHHHHHHHHHHHHcCCCCCCccE
Q 006746 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE--SGLESAMKKRIMDFLNISENDYGM 192 (632)
Q Consensus 115 ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~--~~~~~~~R~~ia~~l~a~~~ey~v 192 (632)
++-..+|+.++++....+... |-.+.|..++ |++.+ .++..-+.++++++||++|+++.+
T Consensus 27 aSEN~~Sp~v~~al~S~l~nk-----------------yaeg~pg~ry-y~G~~~id~iE~la~~ra~~lF~~~~~~w~a 88 (399)
T PF00464_consen 27 ASENYMSPAVREALGSDLTNK-----------------YAEGYPGKRY-YGGCEYIDEIEELAIERAKELFGAEPKEWYA 88 (399)
T ss_dssp TT-----HHHHHHHTSGGGGS------------------TTEETTEES-SSSTHHHHHHHHHHHHHHHHHHT-STTTEEE
T ss_pred CcccccCHHHHHHhCCcceee-----------------ccccCCCccc-ccCcchhhHHHHHHHHHHHHHhCCCcccceE
Confidence 666788999999876544321 1113343333 44432 567777999999999998776554
Q ss_pred EE-eCCHHHHHHHHHhhCCCCCCCeEEE-ec---cccchhhHHHHHH----HHhcCCEEEEEeccCCccccCHHHHHHHH
Q 006746 193 VF-TANRTSAFKLLAESYPFMSVKNLLT-VY---DYESEAVEAMIRT----SEKRGARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 193 vf-t~naT~al~lv~~sl~~~~gd~ilt-~~---d~~s~~v~~~~~~----a~~~G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
-+ .-|++.|...+..++ .++||+|+. .. +|-+ ....... +..+..++...++++.++.||.+++++.+
T Consensus 89 nvqp~SGs~An~av~~aL-l~pGD~Im~l~l~~GGHls--hg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a 165 (399)
T PF00464_consen 89 NVQPHSGSQANLAVYMAL-LKPGDTIMGLSLPHGGHLS--HGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLA 165 (399)
T ss_dssp E---SSHHHHHHHHHHHH-T-TT-EEEEEEGGGT--GG--GT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHH
T ss_pred EeecCCchHHHHHHHHHH-HhhcCcEEecChhhccccc--ccccccccccccccceEEEEeeeeecCCCeECHHHHHHHH
Confidence 43 348999999999999 699999874 32 3322 1111111 11234678888898788999999999998
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCC-----CCCCCCCCCCCCCcEEEEcccc-c
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGP-----KDMDSFGLSLVRPDFLICSFYQ-I 336 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g-----~~m~~ldls~~~~Df~~~S~hK-~ 336 (632)
...+ ++|+++...+ .=..+|++ +.++|++.|+++++|++|.+| .--.|++ .+|++.+|.|| +
T Consensus 166 ~~~k-----PklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~----~ADvvt~sThKtl 234 (399)
T PF00464_consen 166 KEHK-----PKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP----YADVVTGSTHKTL 234 (399)
T ss_dssp HHH-------SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC----TSSEEEEESSGGG
T ss_pred hhcC-----CCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccc----cceEEEeeccccc
Confidence 8653 6888887764 34567888 889999999999999998774 1113554 37999999999 6
Q ss_pred cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhc
Q 006746 337 FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQS 416 (632)
Q Consensus 337 ~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~ 416 (632)
.| |.| |+++.++.... +.+ .+-..+ ..+.+..+. .-|.+ ..
T Consensus 235 ~G--Prg-giI~~~~~~~~-~~~--~~~~~~-------------------------~~l~~~I~~-avfP~-------~q 275 (399)
T PF00464_consen 235 RG--PRG-GIILTNKGSKN-VDK--KGKEID-------------------------EELAEKIDS-AVFPG-------LQ 275 (399)
T ss_dssp -S--SS--EEEEES-SEEE-E-T--TS-EEE-------------------------HHHHHHHHH-HHTTT-------T-
T ss_pred cc--cCc-eEEEEcCCccc-cCC--cccccH-------------------------HHHHHHhcc-ccCCC-------cc
Confidence 67 986 88888855431 111 000000 011110000 01111 13
Q ss_pred CCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEE
Q 006746 417 GKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVK 496 (632)
Q Consensus 417 Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~ 496 (632)
|.++...|.++. .+|..+.+.....-.+++..-++.|-+.|.+. | ++
T Consensus 276 g~~h~~~iaalA------------------------val~ea~~~~fk~Ya~qVv~NAk~La~~L~~~------G---~~ 322 (399)
T PF00464_consen 276 GGPHMHRIAALA------------------------VALKEALSPEFKEYAKQVVKNAKALAEALQER------G---FK 322 (399)
T ss_dssp SS--HHHHHHHH------------------------HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT------T----E
T ss_pred cCcchhHHHHHH------------------------HHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC------C---cE
Confidence 556666777776 66666544445667777888888888888886 5 45
Q ss_pred EECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccc
Q 006746 497 IYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRK 576 (632)
Q Consensus 497 Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 576 (632)
|.+.. -....|-..+.. ..++...+++.+++.||.+--- .. +.+
T Consensus 323 v~~gg---Td~H~vlvd~~~---~~~~g~~a~~~Le~~gI~vnkn---~i-------------------------P~d-- 366 (399)
T PF00464_consen 323 VVTGG---TDNHQVLVDLRS---FGIDGKEAEKALEEAGIIVNKN---TI-------------------------PGD-- 366 (399)
T ss_dssp EGGGS----SSSEEEEEGGG---GTS-HHHHHHHHHHTTEE-EEE------------------------------TTT--
T ss_pred EEECC---CCCCeEEEEecc---cccchHHHHHHHHhcCeeeccc---cc-------------------------CCC--
Confidence 55422 234566666543 1278889999999999987420 00 000
Q ss_pred ccCCCCCcEEEEccCCCC----CHHHHHHHHHHH
Q 006746 577 DKANLGITVVTASLGYLA----NFEDVYRLWAFV 606 (632)
Q Consensus 577 ~~~~~~~~~VRvSlg~~~----t~eDV~rlv~~l 606 (632)
........||++...+| .++|+..+.++|
T Consensus 367 -~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 367 -RSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp -STTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred -CCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 01223468999987766 567777666543
No 216
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.48 E-value=7.8e-12 Score=134.21 Aligned_cols=164 Identities=16% Similarity=0.108 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
++.++.++.+++++|.+++ .+++++++++|+..++.++ .++||+|++. .|.+ ....+...++..|+++.. .
T Consensus 54 ~~~~~Le~~lA~~~g~~~e--~ilv~~gg~~a~~~~~~al-~~~gd~Vli~~~d~p--~~~s~~~~~~l~ga~~~~--~- 125 (346)
T TIGR03576 54 IFEEKVQELGREHLGGPEE--KILVFNRTSSAILATILAL-EPPGRKVVHYLPEKP--AHPSIPRSCKLAGAEYFE--S- 125 (346)
T ss_pred HHHHHHHHHHHHHcCCCcc--eEEEECCHHHHHHHHHHHh-CCCCCEEEECCCCCC--CchhHHHHHHHcCCEEec--c-
Confidence 6778999999999999866 6999999999999999999 5899998753 3333 133444556667887532 2
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccc---cchH-HHHHHhhCCcEEEEeccccCCCC--CCCCCCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR---YPYL-WMRIAQENDWHILIDACALGPKD--MDSFGLS 322 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~---~pl~-i~~~a~~~g~~vlvDaaq~~g~~--m~~ldls 322 (632)
.+.++++. . + ++++++++. .+++|.. -|++ |+++|+++|++++||-|+..+.. ...-.+.
T Consensus 126 -----~~l~~l~~-~-~------~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~ 191 (346)
T TIGR03576 126 -----DELSELKK-I-D------GTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPAL 191 (346)
T ss_pred -----CCHHHHhh-C-c------CceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHH
Confidence 13344321 1 1 247888876 4788988 5788 88999999999999999876531 0111112
Q ss_pred CCCCcEEEEcccccc-CCCCCceEEEEEeCCCccccC
Q 006746 323 LVRPDFLICSFYQIF-GENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~-G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
.+++|+++.|++|.+ | +. .|+++.+++.++.|.
T Consensus 192 ~~~~divv~s~SKalaG--~r-~G~v~~~~~li~~l~ 225 (346)
T TIGR03576 192 DLGADLVVTSTDKLMDG--PR-GGLLAGRKELVDKIK 225 (346)
T ss_pred HcCCcEEEeccchhccc--cc-eEEEEeCHHHHHHHH
Confidence 346799999999966 6 55 589888887766554
No 217
>PRK10534 L-threonine aldolase; Provisional
Probab=99.47 E-value=9.4e-12 Score=132.36 Aligned_cols=174 Identities=10% Similarity=0.055 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhc-CCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKR-GARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~-G~~v~~v~~~ 248 (632)
....+.+++|++++|.++ ++++.|+++++.++...+ ..+||+|++..-.|...... ..+... +++++.++.+
T Consensus 34 ~~~~~L~~~la~~~g~~~----~~v~~~g~~a~~~~l~~~-~~~gd~vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 106 (333)
T PRK10534 34 PTVNALQDYAAELSGKEA----ALFLPTGTQANLVALLSH-CERGEEYIVGQAAHNYLYEA--GGAAVLGSIQPQPIDAA 106 (333)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEeCchHHHHHHHHHHh-cCCCCeeEEechhhhhHhcC--CchHHhcCceEEeecCC
Confidence 345689999999999863 457778888877766666 67899977543222111111 001222 3677777776
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEeccccCCCC---CCCC-C
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACALGPKD---MDSF-G 320 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq~~g~~---m~~l-d 320 (632)
.++.+|+++|++++++++....+++++.+. ++.||..+|.+ | +++|+++|+.+++|.|...... -..+ +
T Consensus 107 -~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~--np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~ 183 (333)
T PRK10534 107 -ADGTLPLDKVAAKIKPDDIHFARTRLLSLE--NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKE 183 (333)
T ss_pred -CCCCCCHHHHHHhhcccCcCcccceEEEEe--cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHH
Confidence 567789999999886521111135788887 45579999987 5 4678889999999987443210 0011 1
Q ss_pred CCCCCCcEEEEccccccCCCCCceE-EEEEeCCCcccc
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFG-CLFVKKSTVPIL 357 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G-~L~Vr~~~~~~L 357 (632)
+. ...|.++.++.|.||. + +| +++..++.++.+
T Consensus 184 ~~-~~~~~~~~s~SK~~~~-~--~G~~~~~~~~~i~~~ 217 (333)
T PRK10534 184 IT-QYCDSFTICLSKGLGT-P--VGSLLVGNRDYIKRA 217 (333)
T ss_pred HH-hcCCEEEEEeEcCCCC-c--ccceEEcCHHHHHHH
Confidence 11 1347777899999986 4 67 455456555433
No 218
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.47 E-value=5.1e-11 Score=130.32 Aligned_cols=297 Identities=8% Similarity=0.092 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--------CCCCC-eEEEe-ccccchhhHHHHHHH----
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--------FMSVK-NLLTV-YDYESEAVEAMIRTS---- 235 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--------~~~gd-~ilt~-~d~~s~~v~~~~~~a---- 235 (632)
+...+..++++++++.+ .+.|++++++|+..+..... ..+|+ .|++. ..||......+...-
T Consensus 79 ~~~~~l~~~l~~~~~~~----~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~ 154 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYD----KVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDS 154 (401)
T ss_pred HHHHHHHHHHHhhcCCC----EEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccc
Confidence 45568888999998742 68999999999998877631 12344 36554 356653233322100
Q ss_pred -HhcC---CEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEE
Q 006746 236 -EKRG---ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILI 306 (632)
Q Consensus 236 -~~~G---~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlv 306 (632)
...| ..+..++. -++++|+++|.+. ...+..|++..+.+.+|...| ++ +.++|+++|+++++
T Consensus 155 ~~~~~~~~~~~~~~~~------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~ 225 (401)
T TIGR01885 155 RTNFGPYVPGFKKIPY------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIA 225 (401)
T ss_pred ccccCCCCCCceEeCC------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 0112 12222222 1578899888642 134678888888889999998 88 99999999999999
Q ss_pred eccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 307 DACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 307 Daaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
|.++.. |.. +..++...+.||++++| |.+|.+-.-+|++..+++.++.+.....+.+ +
T Consensus 226 DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t----------~------- 286 (401)
T TIGR01885 226 DEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLADDDVMLTIKPGEHGST----------Y------- 286 (401)
T ss_pred echhhCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEcHHHHhhccCCCCCCC----------C-------
Confidence 998642 211 11223344678988876 9665210126788887776654432111000 0
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCH
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 463 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl 463 (632)
.+ +.+...+. .++|+.+.+.
T Consensus 287 ----------------~~------------------~p~~~~aa------------------------~a~L~~i~~~-- 306 (401)
T TIGR01885 287 ----------------GG------------------NPLACAVA------------------------VAALEVLEEE-- 306 (401)
T ss_pred ----------------CC------------------CHHHHHHH------------------------HHHHHHHHhc--
Confidence 00 00001111 2677777643
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCcc
Q 006746 464 TMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSL 543 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~ 543 (632)
.+.+|.+.+.+++++.|.++.+ +.+.-+ ..+|.+..+-+.+.... .....+.+.+.++||.+..+
T Consensus 307 -~l~~~~~~~~~~~~~~L~~l~~------~~~~~~-----~g~g~~~~i~~~~~~~~-~~~~~l~~~l~~~Gv~v~~~-- 371 (401)
T TIGR01885 307 -KLAENAEKLGEIFRDQLKKLPK------PIITEV-----RGRGLLNAIVIDESKTG-RTAWDLCLKLKEKGLLAKPT-- 371 (401)
T ss_pred -cHHHHHHHHHHHHHHHHHhccC------CceeEE-----eecCeeEEEEeccCcch-hHHHHHHHHHHhCCEEEEec--
Confidence 4568899999999999999832 332111 13577777666442111 12344444445678887411
Q ss_pred CChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 544 HHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 544 c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+...||+++++..+.+||+++++.|+++||
T Consensus 372 --------------------------------------~~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 372 --------------------------------------HGNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred --------------------------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 235899999999999999999999999876
No 219
>PRK07049 methionine gamma-lyase; Validated
Probab=99.47 E-value=2.2e-12 Score=142.26 Aligned_cols=167 Identities=14% Similarity=0.132 Sum_probs=119.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
...+++|+++.|.+ .+++++|+++|+.++..++ .++||+|++.. -|.. ....+...++..|++++.++.
T Consensus 86 ~~Le~~lA~leg~~----~~iv~~sG~~Ai~~~l~al-~~~Gd~Vv~~~p~Y~~-~~~~~~~~l~~~Gi~~v~~~~---- 155 (427)
T PRK07049 86 EIVEDRLAVYEGAE----SAALFSSGMSAIATTLLAF-VRPGDVILHSQPLYGG-TETLLAKTFRNFGVGAVGFAD---- 155 (427)
T ss_pred HHHHHHHHHHhCCC----cEEEEccHHHHHHHHHHHH-hCCCCEEEEcCCCccc-HHHHHHHHHHhcCcEEEEEeC----
Confidence 47889999999864 4777888889999999888 68999987654 3332 333334455778998766652
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh------CCcEEEEeccccCCCCCCCCCCCCC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE------NDWHILIDACALGPKDMDSFGLSLV 324 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~------~g~~vlvDaaq~~g~~m~~ldls~~ 324 (632)
..+.+++++.|.+.. .+.+++++.+...+|+||..+|++ +.++++. +++.++||-+-..+....++ ..
T Consensus 156 -~~d~~~l~~~l~~~~-~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl---~~ 230 (427)
T PRK07049 156 -GLSEAAIGAAAEAAA-AKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPL---EH 230 (427)
T ss_pred -CCCHHHHHHHHHhhc-cCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCcc---cc
Confidence 146678887776421 113579999999999999999999 9999887 79999999984333311244 34
Q ss_pred CCcEEEEccccccCCCCCc--eEEEEEeCCCcc
Q 006746 325 RPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 355 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~ 355 (632)
+.|+++.|+-|.+|. ..| +|+++.+++.++
T Consensus 231 g~divv~S~SK~~gG-~~glr~G~vv~~~~l~~ 262 (427)
T PRK07049 231 GADLSVYSLTKYVGG-HSDLVAGAVLGRKALIR 262 (427)
T ss_pred CCCEEEEcCceeecC-CCCcEEEEEECCHHHHH
Confidence 789999999998773 223 466665554443
No 220
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.47 E-value=2.3e-11 Score=130.86 Aligned_cols=162 Identities=14% Similarity=0.164 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
..+.|+.|+++++++++ .|++|+|+++++.+++..+ .+ ++|++. ..|+ .....++..|++++.++.+.+
T Consensus 56 ~~~lr~~ia~~~~~~~~--~i~it~Ga~~~l~~~~~~~--~~-~~v~i~~P~y~-----~~~~~~~~~g~~~~~~~~~~~ 125 (354)
T PRK06358 56 YLELRKRIASFEQLDLE--NVILGNGATELIFNIVKVT--KP-KKVLILAPTFA-----EYERALKAFDAEIEYAELTEE 125 (354)
T ss_pred HHHHHHHHHHHhCCChh--hEEECCCHHHHHHHHHHHh--CC-CcEEEecCChH-----HHHHHHHHcCCeeEEEeCccc
Confidence 35899999999999876 7999999999999999987 33 455433 3333 224456778999999988633
Q ss_pred -ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEecccc--C--CCCCCCCC-
Q 006746 251 -RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACAL--G--PKDMDSFG- 320 (632)
Q Consensus 251 -~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~--~--g~~m~~ld- 320 (632)
...++ +++.+.+.++ +++++++..+|+||..++ ++ |+++|+++|+++++|.+-. . +.....+.
T Consensus 126 ~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 198 (354)
T PRK06358 126 TNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINY 198 (354)
T ss_pred cCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHh
Confidence 23577 6666655432 588888888999999998 45 6778899999999998732 1 11000111
Q ss_pred CCCCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
++..+-=+++.|+-|.||.+-..+|++++.
T Consensus 199 ~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 199 LENFKNLIIIRAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred ccCCCCEEEEEechhhccCcchhheeeecC
Confidence 111122278899999999643456777664
No 221
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.46 E-value=1.7e-11 Score=134.75 Aligned_cols=175 Identities=13% Similarity=0.112 Sum_probs=124.1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEeCCHH-HHHHHHHhhCCCC--CCCeEEEe-ccccchhhHHHHHHHHhcCCEEE
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFTANRT-SAFKLLAESYPFM--SVKNLLTV-YDYESEAVEAMIRTSEKRGARVM 243 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT-~al~lv~~sl~~~--~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~ 243 (632)
...+..+..+.+++++|++.-+ ..++++++| .++-+++.++... +|++|+++ ..|.| .. ..+...|++++
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S-~~----kAi~~~G~~pv 176 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIK-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKS-CI----KAISTAGFEPR 176 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCC-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHH-HH----HHHHHcCCeEE
Confidence 3578889999999999997432 478889999 6888888887643 57887654 45544 22 34566899999
Q ss_pred EEec--cCCccccCHHHHHHHHHhcCcCCCceeEEEEecc-CCCCccccchH-HHHHHhhCCcEEEEeccccCCCCC-CC
Q 006746 244 SAEF--SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLH-SRMTGARYPYL-WMRIAQENDWHILIDACALGPKDM-DS 318 (632)
Q Consensus 244 ~v~~--~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~-sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m-~~ 318 (632)
.++. +.++..+|+++|+++|++.+ .+..++++... ...+|..-|++ |.++|+++|+++++|+|+..+... ..
T Consensus 177 ~Vd~~~d~~~~~iD~e~Le~aIt~~~---~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~ 253 (444)
T TIGR03531 177 VIETVLDGDELTTDVEDIERAIEEIG---PDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYME 253 (444)
T ss_pred EeeeeecCcCCCcCHHHHHHHHHhcc---CCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhh
Confidence 9984 45678899999999998632 11233333322 33445788999 999999999999999998875410 01
Q ss_pred C---CCCCCCCcEEEEccccccCCCCCceEEEEEeCC
Q 006746 319 F---GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 319 l---dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
+ ++..-.+|.+++|+||++.. |.+-|+++++++
T Consensus 254 ~~~~g~~~Grad~vv~s~hK~l~~-pg~Gg~I~~~d~ 289 (444)
T TIGR03531 254 LINKAIKVGRVDAVVSSTDKNFMV-PVGGAIIYSFDE 289 (444)
T ss_pred hhhccccccCCCeEEEeCccCCCC-CCCEEEEEECCH
Confidence 1 11111479999999998886 777777777554
No 222
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.46 E-value=9.7e-12 Score=134.88 Aligned_cols=167 Identities=11% Similarity=0.103 Sum_probs=124.9
Q ss_pred cccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCC
Q 006746 162 LLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGA 240 (632)
Q Consensus 162 ~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~ 240 (632)
..|++......+...++|+++-|+. .++.++++..|+..+..++ .++||+|+... -|.. ....+.+...+.|+
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g~----~a~~~~SGmaAi~~~l~~l-l~~Gd~iv~~~~~Y~~-t~~~~~~~l~~~gv 120 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGGE----DALLFSSGMAAISAALLAL-LKPGDHIVASDDLYGG-TYRLLEELLPRFGV 120 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT-S----EEEEESSHHHHHHHHHHHH-S-TTBEEEEESSSSHH-HHHHHHHCHHHTTS
T ss_pred cceeccccccHHHHHHHHHHhhccc----ceeeccchHHHHHHHHHhh-cccCCceEecCCccCc-chhhhhhhhcccCc
Confidence 3456555666678899999999984 4677789999999888888 78999987544 4543 56666667788999
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCC-cEEEEeccccCCCCCCC
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEND-WHILIDACALGPKDMDS 318 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g-~~vlvDaaq~~g~~m~~ 318 (632)
++.+++. -+.++|+++++++ +++|.+-..+|++....|++ ++++||++| +.++||.+-.-|....|
T Consensus 121 ~v~~~d~------~d~~~l~~~l~~~------t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~p 188 (386)
T PF01053_consen 121 EVTFVDP------TDLEALEAALRPN------TKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNP 188 (386)
T ss_dssp EEEEEST------TSHHHHHHHHCTT------EEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-G
T ss_pred EEEEeCc------hhHHHHHhhcccc------ceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeeecc
Confidence 9998865 2678999999875 49999999999999999999 999999999 99999998655643345
Q ss_pred CCCCCCCCcEEEEccccccCCCCCc---eEEEEEeC
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSG---FGCLFVKK 351 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G---~G~L~Vr~ 351 (632)
|+ +++|+++-|.-|.++. .| .|++.+++
T Consensus 189 L~---~GaDivv~S~TKyl~G--hsdv~~G~vv~~~ 219 (386)
T PF01053_consen 189 LE---LGADIVVHSATKYLSG--HSDVMGGAVVVNG 219 (386)
T ss_dssp GG---GT-SEEEEETTTTTTT--SSSE-EEEEEESS
T ss_pred Cc---CCceEEEeeccccccC--CcceeeEEEEECc
Confidence 55 4799999999998773 35 46666655
No 223
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.46 E-value=7.4e-12 Score=135.44 Aligned_cols=168 Identities=12% Similarity=0.172 Sum_probs=120.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.|+++++++++ .|++|+|+++++.+++..+ .++||+|++.. .|+ .....++..|++++.++.+ +
T Consensus 67 ~~Lr~aia~~~~~~~~--~I~vt~Gs~e~i~~~~~~l-~~~gd~vlv~~P~y~-----~~~~~~~~~g~~v~~v~~~--~ 136 (366)
T PRK01533 67 TTLRQTIANKLHVKME--QVLCGSGLDEVIQIISRAV-LKAGDNIVTAGATFP-----QYRHHAIIEGCEVKEVALN--N 136 (366)
T ss_pred HHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHHHh-cCCCCEEEEcCCcHH-----HHHHHHHHcCCEEEEeecC--C
Confidence 4789999999999876 7999999999999999998 68999977543 333 2345567889999999985 3
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHH---hhCCcEEEEecccc--CCC-C-CCCCCC-C
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIA---QENDWHILIDACAL--GPK-D-MDSFGL-S 322 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a---~~~g~~vlvDaaq~--~g~-~-m~~ldl-s 322 (632)
+.+++++|+++++++ ++++.++..+|+||..+|.+ +.+++ ++++ .+++|-+-. ... . ...+.+ .
T Consensus 137 ~~~d~~~l~~~~~~~------~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~ 209 (366)
T PRK01533 137 GVYDLDEISSVVDND------TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLE 209 (366)
T ss_pred CCcCHHHHHHHhCcC------CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhc
Confidence 458999999888654 48899999999999999987 65554 4555 577787632 110 0 001111 1
Q ss_pred CCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 323 LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
..+--+++.|+-|.||.+.--+|+++..++.++.+
T Consensus 210 ~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l 244 (366)
T PRK01533 210 KHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKL 244 (366)
T ss_pred cCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHH
Confidence 22235888999999995322358877766555444
No 224
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.45 E-value=3.2e-11 Score=128.97 Aligned_cols=203 Identities=11% Similarity=0.140 Sum_probs=139.1
Q ss_pred CceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 108 NHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 108 ~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
+.++||++... ..|..+++++.+.+... + . . .|.. .-..+.|+.|++++|++
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------~-~--~Y~~---~g~~~lr~~ia~~~~~~ 71 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRV----P-----------------F-N--RYPH---ITSDPLREAIAEFYGLD 71 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcC----c-----------------c-c--cCCC---CCHHHHHHHHHHHhCcC
Confidence 45899988877 45677777765433210 0 0 0 0110 01247899999999998
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
++ .|++|+|+++++.+++..+ +||+|++.. .|+ .....++..|++++.++.+ .+..++.+++++.+.
T Consensus 72 ~~--~I~~t~G~~~~l~~~~~~~---~gd~V~v~~P~y~-----~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~~~- 139 (337)
T PRK03967 72 AE--NIAVGNGSDELISYLVKLF---EGKHIVITPPTFG-----MYSFYAKLNGIPVIDVPLK-EDFTIDGERIAEKAK- 139 (337)
T ss_pred cc--eEEEcCCHHHHHHHHHHHh---CCCeEEEeCCChH-----HHHHHHHHcCCeEEEeecC-CCCCcCHHHHHHhcc-
Confidence 76 7999999999999999876 589976543 443 1233457789999999987 455788888877542
Q ss_pred cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecccc--CCCCCCCCCCCCCCCcEEEEccccccCCCCC
Q 006746 266 KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACAL--GPKDMDSFGLSLVRPDFLICSFYQIFGENPS 342 (632)
Q Consensus 266 ~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~--~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~ 342 (632)
+ ++++.++..+|+||..+|.+ +.++++ +++++++|.+.. .+..+.++ ++...-=+++.|+-|.||.+--
T Consensus 140 ~------~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~-~~~~~~vi~l~S~SK~~~l~Gl 211 (337)
T PRK03967 140 N------ASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGL-IDEYPNLILLRTFSKAFGLAGI 211 (337)
T ss_pred C------CCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHH-HhhCCCEEEEecchHhhcchhh
Confidence 2 37888999999999999999 988885 699999999743 22111111 1111113677999999996323
Q ss_pred ceEEEEEeCCCcccc
Q 006746 343 GFGCLFVKKSTVPIL 357 (632)
Q Consensus 343 G~G~L~Vr~~~~~~L 357 (632)
-+|++++.++.++.+
T Consensus 212 RiG~iv~~~~~i~~~ 226 (337)
T PRK03967 212 RAGYAIANEEIIDAL 226 (337)
T ss_pred hheeeecCHHHHHHH
Confidence 479988876655444
No 225
>PRK08175 aminotransferase; Validated
Probab=99.45 E-value=2.5e-11 Score=132.43 Aligned_cols=172 Identities=11% Similarity=0.068 Sum_probs=116.4
Q ss_pred HHHHHHHHHc----CC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----NI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ |. +++ ..|++|+|+++++.+++..+ .++||+|++. ..|+. .. ..++..|+++..++
T Consensus 71 ~lr~aia~~~~~~~g~~~~~~-~~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~-~~----~~~~~~g~~~~~v~ 143 (395)
T PRK08175 71 RLRRAISRWYQDRYDVDIDPE-SEAIVTIGSKEGLAHLMLAT-LDHGDTVLVPNPSYPI-HI----YGAVIAGAQVRSVP 143 (395)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcc-hH----HHHHHcCCeEEEEe
Confidence 5666666664 43 433 15999999999999999988 6899998754 34543 11 22356799999998
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccC----CCCCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALG----PKDMDS 318 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~----g~~m~~ 318 (632)
.+... ...+++++++.... .+++++.++..+|+||..+|. + |+++|+++|+++++|-+-.. +....+
T Consensus 144 ~~~~~--~~~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~ 218 (395)
T PRK08175 144 LVEGV--DFFNELERAIRESY---PKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPS 218 (395)
T ss_pred cccCC--CcHHHHHHHHhhcc---CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcc
Confidence 86322 34788888776421 245888888889999999998 4 78889999999999986421 111011
Q ss_pred C-CCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 319 F-GLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 319 l-dls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
+ .+.. .+..+++.|+-|.||.+-..+|+++..+++++.+
T Consensus 219 ~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~ 259 (395)
T PRK08175 219 IMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSAL 259 (395)
T ss_pred hhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHH
Confidence 1 1111 1234678999999986312368887666555433
No 226
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.45 E-value=1.4e-11 Score=135.36 Aligned_cols=171 Identities=13% Similarity=0.132 Sum_probs=121.6
Q ss_pred HHHHHHHHHc----C---CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDFL----N---ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~l----~---a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
+.|+.|++++ | ++++ ..|++|+|+++++.+++..+ ..+||.|++. ..|+. ....++..|+++..+
T Consensus 85 ~lr~aia~~~~~~~g~~~~~~~-~~I~it~Gs~~al~~~~~~~-~~~gd~Vlv~~P~y~~-----~~~~~~~~g~~v~~v 157 (410)
T PRK06290 85 EFKEAAARYMEKVFGVKDIDPV-TEVIHSIGSKPALAMLPSCF-INPGDVTLMTVPGYPV-----TGTHTKYYGGEVYNL 157 (410)
T ss_pred HHHHHHHHHHHHHcCCCcCCCc-ceEEEccCHHHHHHHHHHHh-CCCCCEEEEeCCCCcc-----HHHHHHHcCCEEEEE
Confidence 6677777775 4 4443 26999999999999999988 6899997654 35542 234567789999999
Q ss_pred eccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccC----CCCC
Q 006746 246 EFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALG----PKDM 316 (632)
Q Consensus 246 ~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~----g~~m 316 (632)
+.+.. ...++++++++.+.++ ++++.+...+|+||..+|. + |+++|+++|+++++|-+... +...
T Consensus 158 ~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~ 231 (410)
T PRK06290 158 PLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPL 231 (410)
T ss_pred ecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCc
Confidence 98732 3456889998887643 4888888889999999995 4 77889999999999987432 1100
Q ss_pred CCCCCC-CCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 317 DSFGLS-LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 317 ~~ldls-~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
.-+.+. ..+.++++.|+-|.+|.+-.-+|+++..++.++.+
T Consensus 232 s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l 273 (410)
T PRK06290 232 SFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAF 273 (410)
T ss_pred ChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHH
Confidence 011121 12457999999999985312269888766655433
No 227
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.44 E-value=4.4e-11 Score=131.77 Aligned_cols=293 Identities=11% Similarity=0.061 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC------------CC-CCCCeEEEeccccchhhHHHHHHHH
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY------------PF-MSVKNLLTVYDYESEAVEAMIRTSE 236 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl------------~~-~~gd~ilt~~d~~s~~v~~~~~~a~ 236 (632)
...++..+++++++|.+. .++| +++..|.-.++.++ +. .+++.|+.+...|+..+..++ +++
T Consensus 147 ~~h~~LE~~LA~f~g~e~---all~-sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~ 221 (476)
T PLN02955 147 TYHRLLESSLADLKKKED---CLVC-PTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAE 221 (476)
T ss_pred HHHHHHHHHHHHHHCCCc---EEEE-CChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hcc
Confidence 566789999999999862 4555 45555544444433 11 233446666655553555643 344
Q ss_pred hc-CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC
Q 006746 237 KR-GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK 314 (632)
Q Consensus 237 ~~-G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~ 314 (632)
++ ++++..++. .|+++|+++|...+ ....+|++..+-++.|...|++ +.++++++|++++||-|+..|.
T Consensus 222 ~~~~a~~~~f~H------ND~~~Le~~L~~~~---~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv 292 (476)
T PLN02955 222 RQGNVEVFVYRH------CDMYHLNSLLSSCK---MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFV 292 (476)
T ss_pred ccCCceEEEeCC------CCHHHHHHHHHhCC---CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCce
Confidence 44 477776654 37899999987533 2347899999999999999999 9999999999999999988643
Q ss_pred C-------CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCC
Q 006746 315 D-------MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETE 387 (632)
Q Consensus 315 ~-------m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e 387 (632)
- ...+++. -++|+++.++=|.||. . -|++..+++.++.+... +.. +.
T Consensus 293 ~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~-~--GGfi~gs~~~~~~l~~~--~~~---------~i----------- 346 (476)
T PLN02955 293 CGENGGGVAEEFNCE-ADVDLCVGTLSKAAGC-H--GGFIACSKKWKQLIQSR--GRS---------FI----------- 346 (476)
T ss_pred ecCCCCcHHHHhCCC-CCCcEEEEeCccchhc-c--CceeecHHHHHHHHHHh--CCC---------Ce-----------
Confidence 0 0123443 4679999999999995 3 24455566555444321 100 00
Q ss_pred ccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHH
Q 006746 388 PEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMIS 467 (632)
Q Consensus 388 ~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~ 467 (632)
-+| +. ..+...+. .++++++... +...
T Consensus 347 ------------fSt-al--------------pp~~aaa~------------------------laal~l~~~~--~~~r 373 (476)
T PLN02955 347 ------------FST-AI--------------PVPMAAAA------------------------YAAVVVARKE--KWRR 373 (476)
T ss_pred ------------ecc-cc--------------cHHHHHHH------------------------HHHHHHHhcC--HHHH
Confidence 000 00 00111111 1667766542 2345
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChH
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~ 547 (632)
++++..++++++. + |.+ ..+||+.+-+.+.+ ....+.+.+.++||.+..-.
T Consensus 374 ~~L~~n~~~fr~~---~------G~~-----------~~sPI~pI~ig~~~----~a~~~~~~L~~~Gi~v~~i~----- 424 (476)
T PLN02955 374 KAIWERVKEFKAL---S------GVD-----------ISSPIISLVVGNQE----KALKASRYLLKSGFHVMAIR----- 424 (476)
T ss_pred HHHHHHHHHHHHh---c------CCC-----------CCCCEEEEEeCCHH----HHHHHHHHHHHCCCEEEEEC-----
Confidence 6666777777652 2 322 13788888776521 22334555556799886321
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
| +. -+.+...+|+++...+|.|||++|++.|++..|.
T Consensus 425 ----y---------------Pt---------VP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 425 ----P---------------PT---------VPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred ----C---------------CC---------CCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhh
Confidence 0 00 1223457999999999999999999999988665
No 228
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.44 E-value=7.1e-11 Score=128.62 Aligned_cols=208 Identities=12% Similarity=0.165 Sum_probs=124.5
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|+|..+ .|.-.+.+++++.+.+... + . + ++. + ..+...+..++++
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~----~----~---~------~~~-----~---~~~~~~~la~~l~ 83 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKL----W----H---V------SNL-----Y---RIPEQERLAERLV 83 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhc----C----c---c------ccc-----c---CChHHHHHHHHHH
Confidence 5778999866 4666677787766544321 0 0 0 110 0 1233446777788
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC---CCCCCC----eEE-EeccccchhhHHHHHHHHhcCCEEEEE---eccC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY---PFMSVK----NLL-TVYDYESEAVEAMIRTSEKRGARVMSA---EFSW 249 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl---~~~~gd----~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v---~~~~ 249 (632)
++.+. + .|+|++|+++|+..+.... ...+|+ +|+ ....||.....++. ..|.....- +..
T Consensus 84 ~~~~~--~--~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~----~~~~~~~~~~~~~~~- 154 (389)
T PRK01278 84 ENSFA--D--KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIA----AGGQEKYLEGFGPLV- 154 (389)
T ss_pred hhCCC--C--EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHh----ccCChhhcccCCCCC-
Confidence 77643 2 6999999999999886543 234554 565 45577763333321 112111110 110
Q ss_pred Ccc----ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc----chH-HHHHHhhCCcEEEEeccccC-CCC--CC
Q 006746 250 PRL----RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY----PYL-WMRIAQENDWHILIDACALG-PKD--MD 317 (632)
Q Consensus 250 ~~~----~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~----pl~-i~~~a~~~g~~vlvDaaq~~-g~~--m~ 317 (632)
+.. ..+++++++.|+++ +++|++..+.+.+|... .++ +.++|+++|+++++|-++.. +.. +.
T Consensus 155 ~~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 228 (389)
T PRK01278 155 PGFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF 228 (389)
T ss_pred CCceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce
Confidence 110 14788999888643 58888888888899554 566 78899999999999998763 221 11
Q ss_pred CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
..+.....||++ ++-|.+|. ..-+|+++.+++.++.+
T Consensus 229 ~~~~~~~~pdi~--t~sK~l~~-G~~ig~~~~~~~~~~~~ 265 (389)
T PRK01278 229 AHEWAGVTPDIM--AVAKGIGG-GFPLGACLATEEAAKGM 265 (389)
T ss_pred eecccCCCCCEE--EEehhccC-CcceEEEEEcHHHHhcc
Confidence 122223457865 56697761 11288988887765544
No 229
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.44 E-value=7.3e-11 Score=130.35 Aligned_cols=167 Identities=13% Similarity=0.106 Sum_probs=118.7
Q ss_pred HHHHHHHHHHcCC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 173 SAMKKRIMDFLNI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 173 ~~~R~~ia~~l~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
.+.|+.++++++. .++ ..|+.|+|+++|+.+++..+ .++||.|++.. .|+ .....++..|++++.++.+
T Consensus 124 ~~lr~~ia~~~~~~~~~~-~~Iiit~G~~~al~~~~~~l-~~pgd~Vlv~~P~y~-----~~~~~~~~~g~~~~~v~~~- 195 (431)
T PRK15481 124 PELHAWAARWLRDDCPVA-FEIDLTSGAIDAIERLLCAH-LLPGDSVAVEDPCFL-----SSINMLRYAGFSASPVSVD- 195 (431)
T ss_pred HHHHHHHHHHHhhccCCc-CeEEEecCcHHHHHHHHHHh-CCCCCEEEEeCCCcH-----HHHHHHHHcCCeEEeeccC-
Confidence 3578888888763 222 27999999999999999998 68899977543 333 2245567889999999986
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEE-eccCCCCccccchH----HHHHHhhC-CcEEEEecccc--C--CCCCCCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARYPYL----WMRIAQEN-DWHILIDACAL--G--PKDMDSF 319 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~-~~~sn~TG~~~pl~----i~~~a~~~-g~~vlvDaaq~--~--g~~m~~l 319 (632)
+++ ++.++|+++++++ ++++.+ |..+|+||..++.+ |+++|+++ ++++++|-+-. . +. ...+
T Consensus 196 ~~g-~~~~~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~ 267 (431)
T PRK15481 196 AEG-MQPEKLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVI 267 (431)
T ss_pred CCC-CCHHHHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCC
Confidence 343 8999999988753 356555 58999999999984 67788888 99999997532 1 11 0112
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
.. ..+--+++.||-|.|| +--.+|+++..++.++.+
T Consensus 268 ~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~ 303 (431)
T PRK15481 268 PQ-TTQRWALIRSVSKALG-PDLRLAFVASDSATSARL 303 (431)
T ss_pred cC-CCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHH
Confidence 21 1123489999999999 334568777665554433
No 230
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.44 E-value=2.5e-11 Score=132.37 Aligned_cols=169 Identities=12% Similarity=0.084 Sum_probs=116.4
Q ss_pred HHHHHHHHHc----C----CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCe--EEEec-cccchhhHHHHHHHHhcCCEE
Q 006746 174 AMKKRIMDFL----N----ISENDYGMVFTANRTSAFKLLAESYPFMSVKN--LLTVY-DYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 174 ~~R~~ia~~l----~----a~~~ey~vvft~naT~al~lv~~sl~~~~gd~--ilt~~-d~~s~~v~~~~~~a~~~G~~v 242 (632)
+.|+.|++++ | ++++ ..|++|+|+++|+.+++..+ ..+||+ |++.. .|. .....++..|+++
T Consensus 68 ~lr~aia~~~~~~~~~~~~~~~~-~~i~it~Ga~~al~~~~~~l-~~~gd~~~vlv~~P~y~-----~~~~~~~~~g~~~ 140 (393)
T TIGR03538 68 ELRQAIARWLERRFDLPTGVDPE-RHVLPVNGTREALFAFAQAV-INPGQAPLVVMPNPFYQ-----IYEGAALLAGAEP 140 (393)
T ss_pred HHHHHHHHHHHHhhCCcccCCCC-ceEEECCCcHHHHHHHHHHH-cCCCCcceEEecCCCCc-----chHHHHHhcCCeE
Confidence 6788888877 3 4442 26999999999999999998 688986 55442 333 1233467789999
Q ss_pred EEEeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC-CCC-
Q 006746 243 MSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG-PKD- 315 (632)
Q Consensus 243 ~~v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~-g~~- 315 (632)
+.++.+.. ...++.+++++++.++ ++++.++..+|+||..++ ++ |+++|+++|+++|+|-+-.- -.+
T Consensus 141 ~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 214 (393)
T TIGR03538 141 YFLNCTAENGFLPDFDAVPESVWRR------CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDE 214 (393)
T ss_pred EEeeccccCCCCCCHHHHHHHHhhc------ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCC
Confidence 99998632 2457889999888654 488888999999999999 45 67888999999999987331 100
Q ss_pred -CCCCC----CCCC-----CCcEEEEccccccCCCCCceEEEEEeCCCcc
Q 006746 316 -MDSFG----LSLV-----RPDFLICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 316 -m~~ld----ls~~-----~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
..... +... .-=+++.|+-|.||.+-..+|+++..++.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~ 264 (393)
T TIGR03538 215 GNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILK 264 (393)
T ss_pred CCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHH
Confidence 00110 0011 1128899999988853334677766555443
No 231
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.43 E-value=4.3e-11 Score=127.64 Aligned_cols=167 Identities=14% Similarity=0.107 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
..+.|++|+++++.+++ .|++|+|+++++.+++. + +.+|+ +++.. |+ .......++..|++++.+|.+.
T Consensus 42 ~~~lr~~ia~~~~~~~~--~I~it~Gs~~~l~~~~~-~-~~~~~-vv~~~--P~--y~~y~~~~~~~G~~v~~vp~~~-- 110 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKI--KVLIGPGLTHFIYRLLS-Y-INVGN-IIIVE--PN--FNEYKGYAFTHGIRISALPFNL-- 110 (332)
T ss_pred HHHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHH-H-hCCCc-EEEeC--CC--hHHHHHHHHHcCCeEEEEeCCc--
Confidence 45899999999999976 69999999999999997 4 45664 44332 32 2333556788999999999862
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc--CCCCCCC-CCC-CC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL--GPKDMDS-FGL-SL 323 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~--~g~~m~~-ldl-s~ 323 (632)
...+.+.+++ . +++++.++.-+|+||..+|.+ |++.|+++|+++++|-+-. ......+ ..+ ..
T Consensus 111 ~~~~~~~l~~---~------~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~ 181 (332)
T PRK06425 111 INNNPEILNN---Y------NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRS 181 (332)
T ss_pred ccCcHHHHhh---c------CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhcc
Confidence 2234443321 1 357888899999999999965 5667888999999998622 1110001 111 11
Q ss_pred CCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
.+-=+++.||-|.||.+---+|+++..++.++.+.
T Consensus 182 ~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~ 216 (332)
T PRK06425 182 YGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISR 216 (332)
T ss_pred CCCEEEEeecHHhcCCchhhheeeecCHHHHHHHH
Confidence 22246778999999963222598888777655443
No 232
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.43 E-value=5.7e-11 Score=118.58 Aligned_cols=174 Identities=13% Similarity=0.122 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
..-+.+..+.+++|+|.+ .+=+|.++-+|=-.+..++ -++||-|+.+. .|.+..+ .|++.|.+|..+|-
T Consensus 60 kPpI~~F~~dlaeFlg~D----~~R~t~GARe~KfavMhal-~~~gd~vV~D~~aHYttyv-----AAEragl~v~eVp~ 129 (382)
T COG1103 60 KPPIKDFLEDLAEFLGMD----EVRVTAGAREAKFAVMHAL-CKEGDWVVVDSLAHYTTYV-----AAERAGLNVAEVPN 129 (382)
T ss_pred CCcHHHHHHHHHHHhCCc----eeeecccchhhHHHHHHHh-ccCCCEEEEcCcchHHHHH-----HHHhcCCeEEecCC
Confidence 345567778899999997 4778999999999999998 57899877654 4444222 36889999999986
Q ss_pred c-CCccccCHHHHHHHHHhcCcCC-CceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCC
Q 006746 248 S-WPRLRINSEKLRKMVVSKGKKK-KQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLV 324 (632)
Q Consensus 248 ~-~~~~~i~~~~l~~~i~~~~~~~-~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~ 324 (632)
. -|+..++++.+.+.|++-+++. ..+.|..++|+....|-..|.+ ++++|+++|+++++.+|-.+|. .++.....
T Consensus 130 tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Gr--mpvs~ke~ 207 (382)
T COG1103 130 TGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGR--MPVSGKEI 207 (382)
T ss_pred CCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecc--cccccccc
Confidence 4 4778899999999998643322 4689999999999999999999 9999999999999999999998 68999999
Q ss_pred CCcEEEEcccc-ccCCCCCceEEEEEeCCCccc
Q 006746 325 RPDFLICSFYQ-IFGENPSGFGCLFVKKSTVPI 356 (632)
Q Consensus 325 ~~Df~~~S~hK-~~G~~P~G~G~L~Vr~~~~~~ 356 (632)
++||++.|+|| |-.. .-+|+|-++.+..+.
T Consensus 208 g~DFiVgSGHKsmAAs--~PiGvl~~~eE~ae~ 238 (382)
T COG1103 208 GADFIVGSGHKSMAAS--APIGVLAMSEEWAEI 238 (382)
T ss_pred CCCEEEecCccchhcc--CCeeEEeehhHHHHH
Confidence 99999999999 5442 248999999887654
No 233
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.43 E-value=2.4e-11 Score=134.84 Aligned_cols=170 Identities=14% Similarity=0.166 Sum_probs=117.7
Q ss_pred HHHHHHHHHcC--------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEE
Q 006746 174 AMKKRIMDFLN--------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 174 ~~R~~ia~~l~--------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
+.|+.|+++++ ++|+ .|++|+|+|+|+.+++..+ ..+||.|++.. .|+. ... .+..+.|++++.
T Consensus 99 ~LR~aiA~~l~~~~~~~~~v~p~--~Ivit~G~t~al~~l~~~l-~~pGD~Vlv~~P~Y~~-f~~---~~~~~~g~~vv~ 171 (447)
T PLN02607 99 SFRQAMASFMEQIRGGKARFDPD--RIVLTAGATAANELLTFIL-ADPGDALLVPTPYYPG-FDR---DLRWRTGVKIVP 171 (447)
T ss_pred HHHHHHHHHHHHhcCCCCCcCHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCcc-hHH---HHHhcCCcEEEE
Confidence 67777777765 4544 7999999999999999988 68999987653 4432 222 222357899988
Q ss_pred EeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccC---C-CC
Q 006746 245 AEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALG---P-KD 315 (632)
Q Consensus 245 v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~---g-~~ 315 (632)
++.+.. ...++.+++++++.+..+...+++++.++..+|+||..+|- + +++.|+++++++|+|-+-.. . ..
T Consensus 172 v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~ 251 (447)
T PLN02607 172 IHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASE 251 (447)
T ss_pred EeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC
Confidence 887632 23578999999987533223467899999999999999994 4 67889999999999986432 1 10
Q ss_pred CCCC-CC-CCC---C-Cc--EEEEccccccCCCCCceEEEEEe
Q 006746 316 MDSF-GL-SLV---R-PD--FLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 316 m~~l-dl-s~~---~-~D--f~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
..++ .+ ... + .+ .++.|+-|.||.+.--+|+++..
T Consensus 252 f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~ 294 (447)
T PLN02607 252 FVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSY 294 (447)
T ss_pred cccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEc
Confidence 0111 00 001 1 12 57789999998643446988874
No 234
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.43 E-value=1.4e-11 Score=128.49 Aligned_cols=180 Identities=14% Similarity=0.123 Sum_probs=121.7
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhH--HHHHHHHhcCCE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVE--AMIRTSEKRGAR 241 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~--~~~~~a~~~G~~ 241 (632)
||. .+...++.++++++++. . .+.|++++|.|..+.+.+. .++|..++...+-|.+... .+..+ ..|.+
T Consensus 31 YG~--D~~~~~~e~~~ae~~g~-~---a~~Fv~sGT~aN~lal~~~-~~~~~~vi~~~~aHi~~~E~Ga~~~~--~~~~~ 101 (342)
T COG2008 31 YGE--DPTTNALEQRIAELFGK-E---AALFVPSGTQANQLALAAH-CQPGESVICHETAHIYTDECGAPEFF--GGGQK 101 (342)
T ss_pred CCC--CHHHHHHHHHHHHHhCC-c---eEEEecCccHHHHHHHHHh-cCCCCeEEEeccccceecccCcHHHH--cCCce
Confidence 554 36778999999999998 3 6999999999999999988 4899998766544422111 11111 12233
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKDMD 317 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~m~ 317 (632)
+.. .+.++|.+++++|+..|.........+.++++--+.+.-|+.+|++ |.+.||++|+.+.+|+|-.+-. +.
T Consensus 102 ~~~--~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA-~v 178 (342)
T COG2008 102 LPI--VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANA-LV 178 (342)
T ss_pred ecc--CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHH-HH
Confidence 222 2237899999999999876321223456666666666889999987 4578999999999999644310 01
Q ss_pred C--CCCCC--CCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 318 S--FGLSL--VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 318 ~--ldls~--~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
. .++.. ..+|.+.+++.|-.|. | +=.+|+.+++.++++
T Consensus 179 alg~~~~~~~~~~D~v~~~~tK~g~~-~-~gAiv~gn~~~~~~a 220 (342)
T COG2008 179 ALGVALKTIKSYVDSVSFCLTKGGGA-P-VGAIVFGNRDFAKRA 220 (342)
T ss_pred HcCCCHHHHHhhCCEEEEecccCCcc-e-eeeEEEcCHHHHHHH
Confidence 1 23333 3789999999997774 4 455666666665443
No 235
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.42 E-value=4.5e-11 Score=131.18 Aligned_cols=163 Identities=13% Similarity=0.141 Sum_probs=116.0
Q ss_pred HHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ +++++ .|++|+|+++|+.+++..+ ..+||+|++. ..|+. + ...++..|+++..++
T Consensus 78 ~lr~aia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~~l-~~~gd~v~v~~P~y~~--~---~~~~~~~g~~~~~~~ 149 (409)
T PLN00143 78 PARRAIADYLSNDLPYQLSPD--DVYLTLGCKHAAEIIIKVL-ARPEANILLPRPGFPD--V---ETYAIFHHLEIRHFD 149 (409)
T ss_pred HHHHHHHHHHHhhcCCCCCHh--hEEEecChHHHHHHHHHHH-cCCCCEEEEcCCCCcC--H---HHHHHHcCCEEEEEe
Confidence 5778888876 35554 7999999999999999998 6889997654 34442 1 334567899999998
Q ss_pred ccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 247 FSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 247 ~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
.+. .+..+++++|++++.++ +++++++..+|+||..++. + |+++|+++++++++|-+-.- +....
T Consensus 150 ~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 223 (409)
T PLN00143 150 LLPEKGWEVDLDAVEAIADEN------TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFV 223 (409)
T ss_pred ccCCCCCcCCHHHHHHhcccC------CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCc
Confidence 742 23458999998887654 3788888889999999994 4 66788999999999997431 11001
Q ss_pred CCC-CCCCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 318 SFG-LSLVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 318 ~ld-ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
++. +.....=+++.|+-|.||.+--.+|+++..
T Consensus 224 ~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~ 257 (409)
T PLN00143 224 PMGLFASIVPVITLGSISKRWMIPGWGLGWLVTC 257 (409)
T ss_pred chhhhcccCcEEEEccchhhcCCCccceEEEEee
Confidence 111 111112378899999988643456888773
No 236
>PRK09148 aminotransferase; Validated
Probab=99.42 E-value=5e-11 Score=130.67 Aligned_cols=172 Identities=13% Similarity=0.026 Sum_probs=115.1
Q ss_pred HHHHHHHHHc----CC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----NI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.+++++ |. +++ ..|++|+|+++|+.+++..+ ..+||+|++. ..|+. . ...++..|+++..++
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~-~----~~~~~~~g~~v~~v~ 144 (405)
T PRK09148 72 GLRRAQAAYYARRFGVKLNPD-TQVVATLGSKEGFANMAQAI-TAPGDVILCPNPSYPI-H----AFGFIMAGGVIRSVP 144 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEcCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc-c----HHHHHhcCCEEEEEe
Confidence 5677777766 43 342 26999999999999999998 6899997754 35543 1 233456799999999
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC----CCCCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PKDMDS 318 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~----g~~m~~ 318 (632)
.+.... ..+++++++.... .+++++.++..+|+||..+|.+ |+++|+++|+++++|.+... +....+
T Consensus 145 ~~~~~~--~~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s 219 (405)
T PRK09148 145 AEPDEE--FFPALERAVRHSI---PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPS 219 (405)
T ss_pred CCCCCC--CccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCC
Confidence 863221 2345555554221 2458899998899999999974 67889999999999987432 110001
Q ss_pred C-CCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 319 F-GLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 319 l-dls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
+ .+.. .+..+++.|+-|.||.+-.-+|+++..++.++.+
T Consensus 220 ~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l 260 (405)
T PRK09148 220 VLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAAL 260 (405)
T ss_pred hhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHH
Confidence 1 1111 1234678999999995312279988766655444
No 237
>PRK15029 arginine decarboxylase; Provisional
Probab=99.41 E-value=9.3e-11 Score=135.71 Aligned_cols=174 Identities=11% Similarity=0.092 Sum_probs=127.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+.++.+.+|++||++. ....|+|+|.|+..++.+. .++||+||+.-+.|-+.+..+ .-.|++++++...
T Consensus 204 ~G~I~eAq~~aA~~fgA~~---t~FlvNGST~gn~a~i~a~-~~~gd~Vlv~RN~HKSv~~al----~L~ga~Pvyl~P~ 275 (755)
T PRK15029 204 TGAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKSIEQGL----ILTGAKPVYMVPS 275 (755)
T ss_pred CcHHHHHHHHHHHHhCCCc---EEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH----HHcCCeEEEeccc
Confidence 4678899999999999974 5778999999999999887 689999888765554355553 3469999999755
Q ss_pred CCc----cccC-----HHHHHHHHHhcCcC----CCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC--
Q 006746 249 WPR----LRIN-----SEKLRKMVVSKGKK----KKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG-- 312 (632)
Q Consensus 249 ~~~----~~i~-----~~~l~~~i~~~~~~----~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~-- 312 (632)
++. +.++ ++.|+++|...... .+++++++++.. +.-|+.++++ |+++|+++|+.++||.|+.+
T Consensus 276 ~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 422 2344 89999999754311 134456666665 5799999999 99999999999999998665
Q ss_pred CCC--C---CCCC--C-CCCCCc-EEEEccccccCCCCCceEEEEEeCC
Q 006746 313 PKD--M---DSFG--L-SLVRPD-FLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 313 g~~--m---~~ld--l-s~~~~D-f~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
+.. + ..+. - ...++| +++-|.||+++. -+....|-|+.+
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~ 402 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREG 402 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCC
Confidence 110 0 1120 0 114788 999999998875 667777777543
No 238
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=3.6e-11 Score=132.58 Aligned_cols=349 Identities=12% Similarity=0.107 Sum_probs=200.2
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+.+++.+.+... + . . +. +....+...+..+++.
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~----~----~---~-------~~------~~~~~~~~~~la~~l~ 95 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRL----D----H---V-------IF------AGFTHEPAERLAQRLV 95 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhC----C----C---c-------cc------cccCCHHHHHHHHHHH
Confidence 57889997644 555677787766544321 0 0 0 00 0001233346667777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CC-----CCCC-eEE-EeccccchhhHHHHHHHHhc-------C--CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PF-----MSVK-NLL-TVYDYESEAVEAMIRTSEKR-------G--ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~-----~~gd-~il-t~~d~~s~~v~~~~~~a~~~-------G--~~v~ 243 (632)
+++... -..|.|++++|+|+..+.+-- .+ ++|+ +|+ ....||.....++. ..... + ..+.
T Consensus 96 ~~~p~~--~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls-~~~~~~~~~~~~~~~~~~~ 172 (423)
T PRK05964 96 ALTPGG--LDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMS-VGDRGGMHALYTPLLFEQV 172 (423)
T ss_pred HhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHh-cCCCccccccccCcCCCCE
Confidence 776422 227999999999988765532 11 1344 465 45678875444432 11110 0 1233
Q ss_pred EEeccCCc-cccCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 244 SAEFSWPR-LRINSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 244 ~v~~~~~~-~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
.+++...+ ...+.+++++.|.+.. +.+..|++.- ++...|.+.| ++ +.++|+++|+++++|-+|.. |..
T Consensus 173 ~~~~~~~d~~~~~~~~l~~~l~~~~---~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~ 249 (423)
T PRK05964 173 TAPFPPDGYEQATLDALEALLEKHA---GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRT 249 (423)
T ss_pred EeCCCcchhHHHHHHHHHHHHHhCC---CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 44442111 0112677888786432 3455555554 6777898886 77 78999999999999998752 311
Q ss_pred --CCCCCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 316 --MDSFGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 316 --m~~ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
+...+.....||+++++ |.+|. + ..+|+++.+++.++.+.+....+. ++
T Consensus 250 G~~~a~~~~~v~pDi~~~~--K~l~g-G~~p~~av~~~~~i~~~~~~~~~~~~---------~~---------------- 301 (423)
T PRK05964 250 GTLFACEQAGVSPDIMCLS--KGLTG-GYLPLAATLCTAEIFEAFYSDDRAKA---------FM---------------- 301 (423)
T ss_pred cchhHHHhcCCCCCeeeee--hhhhc-CcccceEEEEcHHHHHhhhcCCcccc---------cc----------------
Confidence 11112233478998877 96653 3 247888888887765532100000 00
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRC 472 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~ 472 (632)
..+| |. .|.....+. .++|+.+.+. .+.++++.
T Consensus 302 ------~~~T--~~------------~np~~~aaa------------------------~a~l~~l~~~---~~~~~~~~ 334 (423)
T PRK05964 302 ------HSPS--YT------------ANPLACAAA------------------------NASLDLFEDE---PVLERVAA 334 (423)
T ss_pred ------cCCC--CC------------cCHHHHHHH------------------------HHHHHHHHhc---CHHHHHHH
Confidence 0111 10 011111222 1667766643 46788899
Q ss_pred HHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHH
Q 006746 473 LINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 473 L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
+.++|++.|.++.. .|.+. + . ...|.++.+.+.+.+... ....+.+.+.++||.++..
T Consensus 335 ~g~~l~~~l~~l~~-----~~~i~---~-v-rg~Gl~~~i~l~~~~~~~-~~~~l~~~l~~~Gv~v~~~----------- 392 (423)
T PRK05964 335 LSAGLAEGLEPFRD-----LPGVA---D-V-RVLGAIGAVELDRPVLER-DGPALRAFALERGVLLRPL----------- 392 (423)
T ss_pred HHHHHHHHHHhhcc-----CCCeE---E-e-ecccEEEEEEeccCcchh-HHHHHHHHHHHCCeEEEec-----------
Confidence 99999999888721 24331 1 1 235778888886532100 1334555555678877421
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ .+||+++++++|.+||+++++.+++.|++
T Consensus 393 -----------------------------~-~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 393 -----------------------------G-NTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred -----------------------------C-CEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 1 48999999999999999999999998753
No 239
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.41 E-value=1.2e-10 Score=128.20 Aligned_cols=219 Identities=14% Similarity=0.127 Sum_probs=145.6
Q ss_pred HHHHhhccCcCC-CCceEeecC---CCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhH
Q 006746 95 QIRAKEYYQLSL-SNHTCLDYF---GIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESG 170 (632)
Q Consensus 95 ~iR~~ef~~L~~-~~~vyLD~a---g~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~ 170 (632)
.+++.-|..+.+ .+.+|+|.- |++.++..|+.++..-.+ . |+...
T Consensus 5 ~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~--------~---------------------Y~~~~-- 53 (431)
T cd00617 5 ALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDE--------A---------------------YAGSK-- 53 (431)
T ss_pred HHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCC--------c---------------------cCCCC--
Confidence 444444433322 467887764 445888888888653100 0 22111
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
-+.+.|+.|++++|.+ .+++|+++|+|+.++..++ .++||.|+....+.+ . .......|++++.++++..
T Consensus 54 g~~~Leeaia~~~g~~----~vv~t~~Gt~Al~la~~al-~~pGD~V~~~~~f~~--~---~~~i~~~Ga~pv~v~i~~~ 123 (431)
T cd00617 54 SFYDLEDAVQDLFGFK----HIIPTHQGRGAENILFSIL-LKPGRTVPSNMHFDT--T---RGHIEANGAVPVDLVIDEA 123 (431)
T ss_pred CHHHHHHHHHHHHCCC----eEEEcCCHHHHHHHHHHHh-CCCCCEEccCCcccc--h---HHHHHhCCCEeEEEecccc
Confidence 1247899999999985 5899999999999999988 789998753333332 2 1233567999999988632
Q ss_pred ---------ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-ccccchH----HHHHHhhCCcEEEEeccccCCCC-
Q 006746 251 ---------RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYPYL----WMRIAQENDWHILIDACALGPKD- 315 (632)
Q Consensus 251 ---------~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~- 315 (632)
.+.+|+++|+++|++++ ..+++++++...+|.+ |..++.+ |.++|+++|++++.|+|++...-
T Consensus 124 ~~~~~~~pf~gniD~e~Le~~I~~~~--~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~ 201 (431)
T cd00617 124 HDAQELIPFKGNIDVAKLEKLIDEVG--AENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAY 201 (431)
T ss_pred cccccccCCCCCcCHHHHHHHhCccc--CCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhh
Confidence 35599999999998642 2357899999999987 8888654 57899999999999999764200
Q ss_pred --------CCCCCCCC------CCCcEEEEccccccCCCCCceEEEEEeCC-CccccC
Q 006746 316 --------MDSFGLSL------VRPDFLICSFYQIFGENPSGFGCLFVKKS-TVPILV 358 (632)
Q Consensus 316 --------m~~ldls~------~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~-~~~~L~ 358 (632)
.....+.+ ...|.+.+|+||-++. |. -|++..+++ ++++++
T Consensus 202 ~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~-~~-GG~i~~~d~~l~~~~~ 257 (431)
T cd00617 202 FIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLV-NI-GGFLALRDDELYEEAR 257 (431)
T ss_pred hhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCC-cc-ceEEEeCcHHHHHHHH
Confidence 00111100 1369999999996554 43 245666653 555444
No 240
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=6.4e-11 Score=128.40 Aligned_cols=174 Identities=11% Similarity=0.130 Sum_probs=118.6
Q ss_pred HHHHHHHHHHcC--------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 173 SAMKKRIMDFLN--------ISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 173 ~~~R~~ia~~l~--------a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
.+.|+.|+++++ ++++ .|++|+|+++++.+++.++ ..+|+ +|++. ..|+ .....++..|+++
T Consensus 69 ~~Lr~aia~~~~~~~~~~~~v~~~--~I~it~Ga~~al~~~~~~~-~~~g~~~Vlv~~P~y~-----~~~~~~~~~g~~~ 140 (374)
T PRK02610 69 EALKQAIAEYVNESAAGSSQITPA--NISVGNGSDELIRSLLIAT-CLGGEGSILVAEPTFS-----MYGILAQTLGIPV 140 (374)
T ss_pred HHHHHHHHHHhCccccccCCCCHH--HEEEcCChHHHHHHHHHHH-cCCCCCeEEEcCCChH-----HHHHHHHHcCCEE
Confidence 478999999988 6655 7999999999999877665 34565 66543 2333 3345567889999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHh-hCCcEEEEecccc--CCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQ-ENDWHILIDACAL--GPKDMDS 318 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~-~~g~~vlvDaaq~--~g~~m~~ 318 (632)
+.++.+..+..+++++|++++.+.. .++++++.++..+|+||..++.+ +-++++ .+++++++|-+-. ....+ .
T Consensus 141 ~~~~~~~~~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~-~ 217 (374)
T PRK02610 141 VRVGRDPETFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL-V 217 (374)
T ss_pred EEecCCcccCCCCHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch-H
Confidence 9998864346789999999886410 12468898888999999999998 655543 1489999998642 12110 0
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
-.+...+-=+++.||-|.||.+.--+|+++..++.++.+
T Consensus 218 ~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l 256 (374)
T PRK02610 218 GELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVL 256 (374)
T ss_pred HHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHH
Confidence 111111112778999999986434468888766655444
No 241
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.40 E-value=5.5e-11 Score=129.34 Aligned_cols=171 Identities=10% Similarity=0.067 Sum_probs=116.8
Q ss_pred HHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ | ++++ ..|+.|+|+++|+.+++..+ ..+||+|++. ..|+. ....++..|++++.++
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~-~~I~it~Gs~~al~~~~~~l-~~~gd~Vlv~~P~y~~-----~~~~~~~~g~~~~~v~ 144 (388)
T PRK07366 72 DFREAAAQWYEQRFGLAVDPE-TEVLPLIGSQEGTAHLPLAV-LNPGDFALLLDPGYPS-----HAGGVYLAGGQIYPMP 144 (388)
T ss_pred HHHHHHHHHHHHhhCCcCCCc-CeEEECCCcHHHHHHHHHHh-CCCCCEEEEcCCCCcc-----hHHHHHhcCCEEEEEE
Confidence 5777788776 4 4543 15999999999999999988 5789997653 34432 2344567899999999
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEecccc----CCCC-C
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACAL----GPKD-M 316 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq~----~g~~-m 316 (632)
.+.. ...++.+++.+.+.++ ++++.++..+|+||..++.+ + +++|+++|+++++|-+-. .+.. .
T Consensus 145 ~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~ 218 (388)
T PRK07366 145 LRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEP 218 (388)
T ss_pred CCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCC
Confidence 8733 2346778887766543 47888888999999999986 4 567899999999997521 1210 0
Q ss_pred CC-CCCCCCC-CcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 317 DS-FGLSLVR-PDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 317 ~~-ldls~~~-~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
.+ +++.... .-+++.||-|.||.+---+|+++..++.++.+
T Consensus 219 ~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l 261 (388)
T PRK07366 219 PSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQAL 261 (388)
T ss_pred CChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHH
Confidence 11 1221111 23678899999986434467777665554433
No 242
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.39 E-value=6.6e-11 Score=127.30 Aligned_cols=170 Identities=11% Similarity=0.100 Sum_probs=117.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCC-
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWP- 250 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~- 250 (632)
.+.|+.|+++++++++ .|++|+|+++++.+++..+ .++||+|++.. .|.. . ...++..|++++.++++..
T Consensus 68 ~~lr~~ia~~~~~~~~--~I~it~G~~~al~~~~~~~-~~~gd~V~v~~P~y~~--~---~~~~~~~g~~~~~~~l~~~~ 139 (357)
T PRK14809 68 ADLTAALADRWDVSPE--QVWLANGGDGALDYLARAM-LDPGDTVLVPDPGFAY--Y---GMSARYHHGEVREYPVSKAD 139 (357)
T ss_pred HHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCChHH--H---HHHHHHcCCeEEEEecccCc
Confidence 4789999999999876 7999999999999999998 68999976543 3331 1 1234567999999988532
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEeccccC-CCCCCCCCC-CCCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDACALG-PKDMDSFGL-SLVR 325 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaaq~~-g~~m~~ldl-s~~~ 325 (632)
+..++.+++.+.+. +++++.++..+|+||..+|.+ +.++++.. +.++++|-+... ..+-..+.. ...+
T Consensus 140 ~~~~~~~~~~~~~~-------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~ 212 (357)
T PRK14809 140 DFEQTADTVLDAYD-------GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERD 212 (357)
T ss_pred CCCcCHHHHHHhhc-------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCC
Confidence 34456777666542 247888999999999999998 77766543 788999987431 110011111 1111
Q ss_pred CcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 326 PDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
-=+++.||-|.||.+--.+|+++..++.++.+
T Consensus 213 ~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~ 244 (357)
T PRK14809 213 DVAVLRTFSKAYGLAGLRLGYAVVPEEWADAY 244 (357)
T ss_pred CEEEEecchhHhcCcchhheeeecCHHHHHHH
Confidence 23778899999985222368888877665544
No 243
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.39 E-value=4e-11 Score=124.80 Aligned_cols=164 Identities=11% Similarity=0.075 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
..+...++|+.+=|-- .-+.|+++..|+-+++..+ .++||+|+....-....++-+....++.|++|+++..+
T Consensus 63 T~~vlE~RiAaLEGG~----aa~a~aSG~AA~~~ai~~l-a~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~-- 135 (426)
T COG2873 63 TTDVLEERIAALEGGV----AALAVASGQAAITYAILNL-AGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD-- 135 (426)
T ss_pred hHHHHHHHHHHhhcch----hhhhhccchHHHHHHHHHh-ccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC--
Confidence 3446678888876643 3456788889999888888 68999988543222235666666679999999999754
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEE
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFL 329 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~ 329 (632)
+++.++++|+++| |+|.+--..|+.+...|++ |.++||++|++++||-+-.-|.-+.|++ ++.|.+
T Consensus 136 ----d~~~~~~aI~~nT------kavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~---hGADIV 202 (426)
T COG2873 136 ----DPENFEAAIDENT------KAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIE---HGADIV 202 (426)
T ss_pred ----CHHHHHHHhCccc------ceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecchhh---cCCCEE
Confidence 5789999999876 8999999999999999999 9999999999999999766664334554 699999
Q ss_pred EEccccccCCCCCceEEEEEeCCCc
Q 006746 330 ICSFYQIFGENPSGFGCLFVKKSTV 354 (632)
Q Consensus 330 ~~S~hK~~G~~P~G~G~L~Vr~~~~ 354 (632)
+-|.-|+.|.+.+.+|.++|.-...
T Consensus 203 vHS~TK~igGhGt~iGG~iVD~G~F 227 (426)
T COG2873 203 VHSATKYIGGHGTAIGGVIVDGGKF 227 (426)
T ss_pred EEeecccccCCccccceEEEeCCcc
Confidence 9999998886677889998876544
No 244
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.39 E-value=1.4e-10 Score=124.68 Aligned_cols=170 Identities=14% Similarity=0.221 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHcC-CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLN-ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~-a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
..+.|+.++++.+ .+++ .|+.++|+++.+.++.+.+ ..+||++++..--.+ .+ ...++..|++++.++.+ +
T Consensus 59 ~~~l~~a~a~~~~~~~~~--~V~~gnGsde~i~~l~~~~-~~~gd~vl~~~Ptf~-~Y---~~~a~~~g~~~~~v~~~-~ 130 (356)
T COG0079 59 YRELRAALAEYYGVVDPE--NVLVGNGSDELIELLVRAF-VEPGDTVLIPEPTFS-MY---EIAAQLAGAEVVKVPLK-E 130 (356)
T ss_pred HHHHHHHHHHHhCCCCcc--eEEEcCChHHHHHHHHHHh-hcCCCEEEEcCCChH-HH---HHHHHhcCCeEEEeccc-c
Confidence 3588999999999 6655 6888999999999999999 688999876542222 12 23567889999999987 4
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEecc--ccCCCCCCCCCCCCCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDAC--ALGPKDMDSFGLSLVR 325 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaa--q~~g~~m~~ldls~~~ 325 (632)
..+|.+.+.+.+.++ ++|+.++.-+|+||..++.+ +.+++... +++|+||-| -+.+. ..+.+-. .
T Consensus 131 -~~~d~~~~~~~~~~~------~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~--~~~~l~~-~ 200 (356)
T COG0079 131 -FRLDLDAILAAIRDK------TKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPE--SSLELLK-Y 200 (356)
T ss_pred -cccCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCc--hhhhhcc-C
Confidence 778999999988864 48999999999999999998 77776543 889999986 44453 2333333 3
Q ss_pred Cc--EEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 326 PD--FLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 326 ~D--f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
.+ +++=||-|.||.+---+|+++.+++.++.|+.
T Consensus 201 ~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~ 236 (356)
T COG0079 201 PPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNK 236 (356)
T ss_pred CCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHH
Confidence 44 78889999999753446888888887766543
No 245
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.38 E-value=1e-10 Score=126.07 Aligned_cols=168 Identities=8% Similarity=0.114 Sum_probs=115.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.|+++++++++ .|++|+|+++++.+++..+ .+|+.|++. -.|+ .....++..|++++.++.+...
T Consensus 60 ~~Lr~aia~~~~v~~~--~I~it~G~~~~i~~~~~~l--~~g~~vlv~~P~y~-----~~~~~~~~~g~~~~~v~~~~~~ 130 (360)
T PRK07392 60 RELRLALAQHHQLPPE--WILPGNGAAELLTWAGREL--AQLRAVYLITPAFG-----DYRRALRAFGATVKELPLPLDQ 130 (360)
T ss_pred HHHHHHHHHHhCcChh--hEEECCCHHHHHHHHHHHh--CCCCeEEEECCCcH-----HHHHHHHHcCCeEEEEeccccc
Confidence 4789999999999876 7999999999999999986 357786653 2333 3345667799999999986332
Q ss_pred cc----cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecccc--CCCC-CCC-CC-C
Q 006746 252 LR----INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACAL--GPKD-MDS-FG-L 321 (632)
Q Consensus 252 ~~----i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~--~g~~-m~~-ld-l 321 (632)
+. .+.+++++.. +++++++++..+|+||..++.+ +.++++++++ +++|-+-. .... ..+ +. +
T Consensus 131 ~~~~~~~~~~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~ 202 (360)
T PRK07392 131 PSPGLTLRLQTLPPQL-------TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCL 202 (360)
T ss_pred CCcccccCHHHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHh
Confidence 21 3455544332 1358999999999999999999 9999999986 66698632 1100 001 11 1
Q ss_pred CCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 322 SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
....-=+++.|+-|.||.+---+|+++..++.++.+
T Consensus 203 ~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~ 238 (360)
T PRK07392 203 AEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRW 238 (360)
T ss_pred hcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHH
Confidence 111113788899999986334568888766555443
No 246
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.38 E-value=1.7e-10 Score=126.34 Aligned_cols=176 Identities=10% Similarity=0.085 Sum_probs=114.4
Q ss_pred HHHHHHHHHc----CCCCCCc-cEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMDFL----NISENDY-GMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey-~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
..|+.|++++ |.+-+.. .|++|+|+++|+.+++..+ ..+||.|++. ..|+. ....++..|++++.+++
T Consensus 75 ~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~-----~~~~~~~~g~~~~~v~~ 148 (403)
T PRK08636 75 KLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAI-TNPGDVAIVPDPAYPI-----HSQAFILAGGNVHKMPL 148 (403)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHh-CCCCCEEEEcCCCCcc-----hHHHHHhcCCEEEEEec
Confidence 5666676665 6432222 5999999999999999998 6889997754 34442 23446678999999988
Q ss_pred cC-CccccCHHHHHHHHHhcCc-CCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 248 SW-PRLRINSEKLRKMVVSKGK-KKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 248 ~~-~~~~i~~~~l~~~i~~~~~-~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
+. .+..++.+++.+.+.+.-+ .+.+++++.++..+|+||..+|.+ |+++|+++++++|+|-+-.- +....
T Consensus 149 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~ 228 (403)
T PRK08636 149 EYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP 228 (403)
T ss_pred cccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC
Confidence 52 3346887765444432110 023468888887799999999985 56778999999999986321 11001
Q ss_pred C-CCCCCC-CCcEEEEccccccCCCCCceEEEEEeCCCcc
Q 006746 318 S-FGLSLV-RPDFLICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 318 ~-ldls~~-~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
+ ..+... +.-+++.|+-|.||.+---+|+++..+++++
T Consensus 229 ~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~ 268 (403)
T PRK08636 229 SILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVG 268 (403)
T ss_pred ChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHH
Confidence 1 112111 2235578999999864344677766555443
No 247
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.38 E-value=1.8e-10 Score=125.97 Aligned_cols=278 Identities=13% Similarity=0.114 Sum_probs=166.4
Q ss_pred cEEEeCCHHHHHHHHHhhCC-C----CCC-CeEE-EeccccchhhHHHHHHHHhcCCEEEEEecc--CCc-cccCHHHHH
Q 006746 191 GMVFTANRTSAFKLLAESYP-F----MSV-KNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFS--WPR-LRINSEKLR 260 (632)
Q Consensus 191 ~vvft~naT~al~lv~~sl~-~----~~g-d~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~--~~~-~~i~~~~l~ 260 (632)
.++|++++++|...++.... + ++| ++|+ ....||......+. .....+.+....|.. .+. ...+.++++
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 173 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMS-ASGKPGWDTIFAPQVPGFPKAELNDIASVE 173 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHh-hcCCcccccCCCCCCCCceeeCCchHHHHH
Confidence 69999999999888776542 1 123 3455 45567764443321 111111111111111 000 013578888
Q ss_pred HHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEc
Q 006746 261 KMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICS 332 (632)
Q Consensus 261 ~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S 332 (632)
+.+.++ +.+|++..+....|...| ++ +.++|+++|+++++|-+|.+ |.. +...+.....||+++++
T Consensus 174 ~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~g 247 (395)
T PRK03715 174 KLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLG 247 (395)
T ss_pred HHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeeh
Confidence 877543 578899999999999988 88 89999999999999998773 210 10111122368988776
Q ss_pred cccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhh
Q 006746 333 FYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIE 412 (632)
Q Consensus 333 ~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~ 412 (632)
|.+|. .--+|++.++++... +.+...+ +| |.
T Consensus 248 --K~lg~-G~p~~av~~~~~i~~-~~~~~~~-------------------------------------~T--~~------ 278 (395)
T PRK03715 248 --KGIGG-GVPLAALLAKAEVAV-FEAGDQG-------------------------------------GT--YN------ 278 (395)
T ss_pred --hhhhC-CcceEEEEEcccccc-ccCCCcC-------------------------------------CC--CC------
Confidence 86552 123788888887641 1111000 11 00
Q ss_pred hhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCC
Q 006746 413 MRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGN 492 (632)
Q Consensus 413 ~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~ 492 (632)
| |.....+. .++|+.+.+ +.+.++++.+.++|++.|+++.... +.
T Consensus 279 ----g--~pl~~aaa------------------------la~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~--~i 323 (395)
T PRK03715 279 ----G--NPLMTAVG------------------------VAVISQLLA---PGFLEGVRARGEYLKEKLLELSEER--GL 323 (395)
T ss_pred ----C--CHHHHHHH------------------------HHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcC--Cc
Confidence 0 00001111 156777654 4567889999999999998873221 11
Q ss_pred CcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhC---CcEEccCccCChHHHhHHHHhhhhhhhhhhccccc
Q 006746 493 ALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRE---NISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKS 569 (632)
Q Consensus 493 p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~---gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 569 (632)
..| .-+|.++++.+.+. ....+.+.+.+. ||.++.
T Consensus 324 ~~v--------rG~Glm~~i~l~~~-----~~~~~~~~~~~~~~~Gi~~~~----------------------------- 361 (395)
T PRK03715 324 EGE--------RGEGLLRALLLGKD-----IGPQIVEKARDMQPDGLLLNA----------------------------- 361 (395)
T ss_pred CeE--------EcceeEEEEEecCc-----hHHHHHHHHHhccCCCEEEee-----------------------------
Confidence 111 13577888877542 123455555555 777641
Q ss_pred cccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 570 KSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 570 ~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+||+++.+..|.+||+++++.|++.++.
T Consensus 362 -----------~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 362 -----------PRPNLLRFMPALNVTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred -----------cCCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 02258999999999999999999999988753
No 248
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.37 E-value=2.5e-10 Score=127.51 Aligned_cols=172 Identities=16% Similarity=0.164 Sum_probs=118.7
Q ss_pred HHHHHHHHHcC--------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEE
Q 006746 174 AMKKRIMDFLN--------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 174 ~~R~~ia~~l~--------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
+.|+.|+++++ ++++ .|+.|+|+++++.+++..+ ..+||.|++.. .|+. ... .+....|++++.
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~--~Iiit~Ga~~al~~l~~~l-~~pGd~Vlv~~P~Y~~-~~~---~~~~~~g~~~v~ 162 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPN--KLVLTAGATSANETLMFCL-AEPGDAFLLPTPYYPG-FDR---DLKWRTGVEIVP 162 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChH--HeEEccChHHHHHHHHHHh-CCCCCEEEECCCCCCc-hHH---HHhhcCCcEEEE
Confidence 57888888875 4554 6999999999999999998 68999987653 4442 111 122257999999
Q ss_pred EeccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC----CCC
Q 006746 245 AEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PKD 315 (632)
Q Consensus 245 v~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~----g~~ 315 (632)
++.+. ....++.+++++++.+..+...+++++.++..+|+||..+|.+ |++.|+++|+++|+|-+-.. +..
T Consensus 163 v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~ 242 (468)
T PLN02450 163 IHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPG 242 (468)
T ss_pred EecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCC
Confidence 98753 3445788999988865321123568888888999999999876 46778899999999986431 211
Q ss_pred CCC-CCC---------CCCCCcEEEEccccccCCCCCceEEEEEeCC
Q 006746 316 MDS-FGL---------SLVRPDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 316 m~~-ldl---------s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
..+ +.+ ....-=+++.|+-|.||.+---+|+++..++
T Consensus 243 ~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 243 FVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDE 289 (468)
T ss_pred cccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCH
Confidence 001 111 0112237889999988864445788887654
No 249
>PRK08068 transaminase; Reviewed
Probab=99.37 E-value=1.8e-10 Score=125.51 Aligned_cols=171 Identities=11% Similarity=0.074 Sum_probs=119.7
Q ss_pred HHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ | ++++ .+|++|+|+++++.+++..+ ..+||+|++. ..|.. . ...++..|++++.++
T Consensus 74 ~lr~aia~~~~~~~g~~~~~~-~~i~it~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~~-~----~~~~~~~g~~~~~i~ 146 (389)
T PRK08068 74 FLKEAAADFYKREYGVTLDPE-TEVAILFGGKAGLVELPQCL-MNPGDTILVPDPGYPD-Y----LSGVALARAQFETMP 146 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-ccEEEcCCcHHHHHHHHHHh-CCCCCEEEEcCCCCcc-h----HHHHHhcCCEEEEee
Confidence 6777777776 5 4443 15899999999999999988 5899997754 34442 1 234567899999999
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
.+.. +..++.+++++.+.++ ++++.++..+|+||..+|.+ |+++|+++++++++|-+-.. +....
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~ 220 (389)
T PRK08068 147 LIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPV 220 (389)
T ss_pred cccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCc
Confidence 8633 3457889998888643 47888887889999999985 56678999999999987421 11000
Q ss_pred C-CCCC-CCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 318 S-FGLS-LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 318 ~-ldls-~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
+ +.+. ..+..+++.|+-|.||.+-.-+|+++..++.++.+
T Consensus 221 s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l 262 (389)
T PRK08068 221 SFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAI 262 (389)
T ss_pred ChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHH
Confidence 1 1111 12345888999999995322278888776655444
No 250
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.37 E-value=2.6e-10 Score=124.39 Aligned_cols=172 Identities=18% Similarity=0.195 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHcCC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 170 GLESAMKKRIMDFLNI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
++-+.+.+...+..|. +++ .+|+.|.++++|+.++..++ ..+||+|+++ -.|++ ... ..+..|++++.++
T Consensus 69 ~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~~al~~~~~a~-~~pGDeVlip~P~Y~~--y~~---~~~~~gg~~v~v~ 141 (393)
T COG0436 69 ELREAIAEKYKRRYGLDVDPE-EEIIVTAGAKEALFLAFLAL-LNPGDEVLIPDPGYPS--YEA---AVKLAGGKPVPVP 141 (393)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcC--HHH---HHHhcCCEEEEEe
Confidence 3444444444555453 333 25999999999999999999 7999997654 46654 222 3455799999999
Q ss_pred ccCC--ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccc--cC--CC-C
Q 006746 247 FSWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACA--LG--PK-D 315 (632)
Q Consensus 247 ~~~~--~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq--~~--g~-~ 315 (632)
.+.+ +..++.++|+++++++| +++++..-+|+||..++- + |+++|+++|++++.|-+- +. +. -
T Consensus 142 l~~~~~~f~~d~~~l~~~i~~kt------k~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~ 215 (393)
T COG0436 142 LDEEENGFKPDLEDLEAAITPKT------KAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEH 215 (393)
T ss_pred CCcCccCCcCCHHHHHhhcCccc------eEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCc
Confidence 7532 57789999999998754 899999999999999984 4 778899999999999852 22 21 0
Q ss_pred CCCCCCCCC-CCcEEEEccccccCCCCCceEEEEEe-CCCc
Q 006746 316 MDSFGLSLV-RPDFLICSFYQIFGENPSGFGCLFVK-KSTV 354 (632)
Q Consensus 316 m~~ldls~~-~~Df~~~S~hK~~G~~P~G~G~L~Vr-~~~~ 354 (632)
...+.+... ..=+.+-|+-|.|+++---+|.++.. +..+
T Consensus 216 ~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~ 256 (393)
T COG0436 216 PSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELI 256 (393)
T ss_pred CCHhhcCCCcceEEEEecccccccccccceeEeecChHHHH
Confidence 012222221 22356668999888654456888877 4443
No 251
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.37 E-value=2.3e-10 Score=120.37 Aligned_cols=340 Identities=12% Similarity=0.105 Sum_probs=218.5
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccch--hHHHHHHHHHHHHHcCCCCCCccE
Q 006746 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE--SGLESAMKKRIMDFLNISENDYGM 192 (632)
Q Consensus 115 ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~--~~~~~~~R~~ia~~l~a~~~ey~v 192 (632)
|+-...|..|++++-..+... |--+-|..++ ||+-+ ..+.+-+.++.+++||++- .=
T Consensus 33 ASEN~~S~aV~~A~gS~ltnK-----------------YAEGyPgkRy-YgGce~VD~vE~laierak~LFga~~---an 91 (413)
T COG0112 33 ASENFTSPAVMEAQGSDLTNK-----------------YAEGYPGKRY-YGGCEYVDEVEELAIERAKKLFGAEY---AN 91 (413)
T ss_pred eccccCCHHHHHHHhhhhhhc-----------------cccCCCCccc-cCCCeeHHHHHHHHHHHHHHHhCCCc---cc
Confidence 666789999999976554321 1123444443 55543 5677788999999999963 33
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEE-ec---cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCc
Q 006746 193 VFTANRTSAFKLLAESYPFMSVKNLLT-VY---DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGK 268 (632)
Q Consensus 193 vft~naT~al~lv~~sl~~~~gd~ilt-~~---d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~ 268 (632)
|=--|++.|...+..++ .+|||.|+- +. .|-+-.. . ..+.-+. .+++..+++..++.||.|++++.+.+.+
T Consensus 92 VQPhSGs~AN~av~~Al-l~pGDtimgm~l~~GGHltHg~-~-v~~sG~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~k- 166 (413)
T COG0112 92 VQPHSGSQANQAVYLAL-LQPGDTIMGLDLSHGGHLTHGS-P-VNFSGKL-FNVVSYGVDPETGLIDYDEVEKLAKEVK- 166 (413)
T ss_pred cCCCCchHHHHHHHHHH-cCCCCeEecccCCCCCcccCCC-C-CCcccee-EEeEecccccccCccCHHHHHHHHHHhC-
Confidence 34458888988898888 799999863 22 2322100 0 1122122 5667778887789999999999988753
Q ss_pred CCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC-----CCCCCCCCCCCCcEEEEcccc-ccCCCC
Q 006746 269 KKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK-----DMDSFGLSLVRPDFLICSFYQ-IFGENP 341 (632)
Q Consensus 269 ~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~-----~m~~ldls~~~~Df~~~S~hK-~~G~~P 341 (632)
++|++.-.- ..-..+|++ +.++|.+.|+++++|+|+.+|. -..|+. .+|+++++.|| +.| |
T Consensus 167 ----PK~ii~G~S--aY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~----~AdvVTtTTHKTlrG--P 234 (413)
T COG0112 167 ----PKLIIAGGS--AYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP----HADVVTTTTHKTLRG--P 234 (413)
T ss_pred ----CCEEEECcc--ccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC----ccceEeCCcccCCCC--C
Confidence 566655332 233568899 8899999999999999987752 112444 27999999999 667 8
Q ss_pred CceEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcc
Q 006746 342 SGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLE 420 (632)
Q Consensus 342 ~G~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~ 420 (632)
.| |+++.++ +..++++...|-|. .|.|+
T Consensus 235 rG-G~Il~~~eel~kkin~aVFPg~--------------------------------------------------qggpl 263 (413)
T COG0112 235 RG-GIILTNDEELAKKINSAVFPGL--------------------------------------------------QGGPL 263 (413)
T ss_pred Cc-eEEEeccHHHHHHhhhhcCCcc--------------------------------------------------CCChH
Confidence 75 4555554 55555654332111 12233
Q ss_pred cchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECC
Q 006746 421 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGP 500 (632)
Q Consensus 421 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp 500 (632)
.--|.+.. -|+....+-+...-.+++..-++.|.+.|.+. |. +|.+-
T Consensus 264 ~HviAaka------------------------Va~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~------G~---~vvsG 310 (413)
T COG0112 264 MHVIAAKA------------------------VAFKEALEPEFKEYAKQVVKNAKALAEALKER------GF---KVVSG 310 (413)
T ss_pred HHHHHHHH------------------------HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc------CC---eEecC
Confidence 33455554 56666656677777888888888888888886 54 44443
Q ss_pred CCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCC
Q 006746 501 KIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 580 (632)
Q Consensus 501 ~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 580 (632)
- --...+...+.+ +| +....+.+++++.||.+--- . .+.+. ...
T Consensus 311 g---TdnHl~lVDl~~-~~--~~Gk~ae~~L~~~~It~NKN-----------------~-----------iP~D~--~~p 354 (413)
T COG0112 311 G---TDNHLVLVDLRS-KG--LTGKKAEAALERAGITVNKN-----------------A-----------IPFDP--ESP 354 (413)
T ss_pred C---ccceEEEEEccc-CC--CCHHHHHHHHHHcCEeeccC-----------------C-----------CCCCC--CCC
Confidence 2 123455555552 22 77889999999999987310 0 01000 022
Q ss_pred CCCcEEEEccCCCCC----HHHHHHHHHHHHHhhhh
Q 006746 581 LGITVVTASLGYLAN----FEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 581 ~~~~~VRvSlg~~~t----~eDV~rlv~~l~~~l~~ 612 (632)
.-.+.||+...-.|+ ++|...+.+++.+.|+.
T Consensus 355 ~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 355 FVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 345688988766664 67788887777777664
No 252
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.36 E-value=1e-10 Score=125.87 Aligned_cols=156 Identities=13% Similarity=0.109 Sum_probs=103.8
Q ss_pred HHHHHHHHHc----C---CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDFL----N---ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~l----~---a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
+.|+.|++++ | ++++ +|++|+|+++|+.++...+..++||+|++. ..|+. + ...++..|++++.+
T Consensus 60 ~lr~~ia~~~~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~--~---~~~~~~~g~~~~~v 132 (357)
T TIGR03539 60 ELREAIVDWLERRRGVPGLDPT--AVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPT--Y---EVGALLAGATPVAA 132 (357)
T ss_pred HHHHHHHHHHHHhcCCCCCCcC--eEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHH--H---HHHHHhcCCEEecc
Confidence 4455555555 3 5554 799999999999999887756899998764 35542 2 23356679887665
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC-C---CCCC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG-P---KDMD 317 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~-g---~~m~ 317 (632)
+ +.+. +.. .+++++.++..+|+||..+|.+ |+++|+++|+++++|.+... . ..+.
T Consensus 133 ~--------~~~~----l~~-----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 195 (357)
T TIGR03539 133 D--------DPTE----LDP-----VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVS 195 (357)
T ss_pred C--------Chhh----cCc-----cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCcc
Confidence 3 1122 221 1358899999999999999844 67788999999999997532 1 1011
Q ss_pred CCCCC----CCCCcEEEEccccccCCCCCc--eEEEEEeCCCcc
Q 006746 318 SFGLS----LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 355 (632)
Q Consensus 318 ~ldls----~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~ 355 (632)
.++-. ...--+++.|+.|.||. | | +|.++..++.++
T Consensus 196 ~~~~~~~~~~~~~vi~~~S~SK~~~~-~-G~R~G~~i~~~~~~~ 237 (357)
T TIGR03539 196 ILDPRVCGGDHTGLLAVHSLSKRSNL-A-GYRAGFVAGDPALVA 237 (357)
T ss_pred ceecccCCCccccEEEEeccccccCC-C-ceeEEEEecCHHHHH
Confidence 12110 11224888999999985 3 6 588776555444
No 253
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.35 E-value=9.1e-10 Score=119.87 Aligned_cols=171 Identities=9% Similarity=0.171 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CC-----CCCeEE-EeccccchhhHHHHHHHHhcCCEE
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FM-----SVKNLL-TVYDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~-----~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v 242 (632)
+...+..++++++.+. + .|+||+++++|+.+++.... +. +.++|+ ....||. ...+.... .|...
T Consensus 81 ~~~~~la~~l~~~~~~--~--~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg-~~~~~~~~---~~~~~ 152 (396)
T PRK02627 81 EPQEELAEKLVELSGM--D--KVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHG-RTLATLSA---TGQPK 152 (396)
T ss_pred HHHHHHHHHHHhhcCC--C--EEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCc-ccHHHHHh---cCCcc
Confidence 4456777888888765 2 79999999999999888541 11 115565 4445664 22221111 11111
Q ss_pred E---EEeccCCcc----ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcc-ccc---hH-HHHHHhhCCcEEEEeccc
Q 006746 243 M---SAEFSWPRL----RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA-RYP---YL-WMRIAQENDWHILIDACA 310 (632)
Q Consensus 243 ~---~v~~~~~~~----~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~-~~p---l~-i~~~a~~~g~~vlvDaaq 310 (632)
. ..+.. ++. ..|++++++++.+ +++++.+..+.+.+|. .+| ++ |.++|+++|+++++|-++
T Consensus 153 ~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~ 225 (396)
T PRK02627 153 YQEGFEPLV-EGFIYVPFNDIEALKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQ 225 (396)
T ss_pred ccccCCCCC-CCceEeCCCCHHHHHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 1 11111 100 1178899888854 3588888888889995 443 56 788999999999999987
Q ss_pred c-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 311 L-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 311 ~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
. ++.. +..++.....+|+++ +-|.+| +.-.+|+++.+++.++.+.
T Consensus 226 ~g~g~~g~~~~~~~~~~~pdi~t--~sK~~~-~G~rig~~~~~~~~~~~~~ 273 (396)
T PRK02627 226 TGMGRTGKLFAYQHYGIEPDIMT--LAKGLG-GGVPIGAVLAKEKVADVFT 273 (396)
T ss_pred cCCCccCceeeehhcCCCCCEEE--Ecchhh-CCcccEEEEEcHHHHhccC
Confidence 6 3321 112222334678765 459877 2234899998887665553
No 254
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.34 E-value=3.5e-10 Score=122.62 Aligned_cols=170 Identities=13% Similarity=0.172 Sum_probs=104.0
Q ss_pred HHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEE-eccccchhhHHHHHH-----HHhcCCEEEEEe
Q 006746 174 AMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLT-VYDYESEAVEAMIRT-----SEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt-~~d~~s~~v~~~~~~-----a~~~G~~v~~v~ 246 (632)
+.++.+++.+...++ ..++|++++|+|...+..... +..+++|++ ...||......+... .+..+..+..++
T Consensus 70 ~~~~~la~~l~~~~~-~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (375)
T PRK04260 70 SLQEEVAQKLIGDKD-YLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFS 148 (375)
T ss_pred HHHHHHHHHHhcCcC-CEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeE
Confidence 456667766544432 246899999999996655431 234556664 567776443333111 000111111111
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--CCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--MDS 318 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m~~ 318 (632)
.. + ..|.+++++.+.+ ++.+|++..+.+.+|...| ++ +.++|+++|+++++|.++.. +.. +..
T Consensus 149 ~~-~--~~dl~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~ 219 (375)
T PRK04260 149 YA-I--FNDLNSVKALVNK------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYA 219 (375)
T ss_pred Ee-C--CCCHHHHHHhcCC------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhh
Confidence 10 0 1367888887753 3589999999999999876 67 89999999999999998753 211 111
Q ss_pred CCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCcccc
Q 006746 319 FGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPIL 357 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L 357 (632)
.......||++ ++-|.+| | .-+|++.++++..+.+
T Consensus 220 ~~~~~~~pdi~--t~sK~l~--~G~~ig~~~~~~~~~~~~ 255 (375)
T PRK04260 220 FEHYGIEPDIF--TLAKGLA--NGVPVGAMLAKSSLGGAF 255 (375)
T ss_pred hHhhCCCCCEE--Eeccccc--CCcceEEEEEcHHHHhhc
Confidence 11223578954 7899777 3 1279999988765544
No 255
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.33 E-value=3.6e-10 Score=123.41 Aligned_cols=169 Identities=12% Similarity=0.087 Sum_probs=115.4
Q ss_pred HHHHHHHHHc----CC---CCCCccEEEeCCHHHHHHHHHhhCCCCC---CCeEEEec-cccchhhHHHHHHHHhcCCEE
Q 006746 174 AMKKRIMDFL----NI---SENDYGMVFTANRTSAFKLLAESYPFMS---VKNLLTVY-DYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 174 ~~R~~ia~~l----~a---~~~ey~vvft~naT~al~lv~~sl~~~~---gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v 242 (632)
+.|+.|++++ |. +++ ..|++|+|+++|+.+++..+ ..+ ||+|++.. .|+ .....++..|+++
T Consensus 69 ~lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l-~~~~~~gd~vlv~~P~y~-----~~~~~~~~~g~~~ 141 (396)
T PRK09147 69 ALREAIAAWLERRYGLPALDPA-TQVLPVNGSREALFAFAQTV-IDRDGPGPLVVCPNPFYQ-----IYEGAALLAGAEP 141 (396)
T ss_pred HHHHHHHHHHHHHhCCCcCCcc-ceEEECCChHHHHHHHHHHH-cCCCCCCCEEEEcCCCcc-----chHHHHHhcCCEE
Confidence 5677777665 63 432 26999999999999999998 577 77877542 333 2234456789999
Q ss_pred EEEeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC---CC
Q 006746 243 MSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG---PK 314 (632)
Q Consensus 243 ~~v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~---g~ 314 (632)
+.+|.+.. +..++++++++.+.++ ++++.++..+|+||..++.+ ++++|+++++++|+|-+-.- ..
T Consensus 142 ~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 215 (396)
T PRK09147 142 YFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDE 215 (396)
T ss_pred EEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCC
Confidence 99998633 2368999998877653 48888999999999999765 56778899999999986332 10
Q ss_pred CCCCCC-C---CCCCC-----cEEEEccccccCCCCCceEEEEEeCCCcc
Q 006746 315 DMDSFG-L---SLVRP-----DFLICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 315 ~m~~ld-l---s~~~~-----Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
...+.. + ...+. -+++.|+-|.||.+-..+|+++..+..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~ 265 (396)
T PRK09147 216 AAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLK 265 (396)
T ss_pred CCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHH
Confidence 000110 0 01111 28899999988863234677776655443
No 256
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.33 E-value=2.1e-10 Score=123.75 Aligned_cols=158 Identities=14% Similarity=0.076 Sum_probs=104.7
Q ss_pred HHHHHHHHHc----C---CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDFL----N---ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~l----~---a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
+.|+.|++++ | ++++ .|++|+|+++++.+++..+.+++||+|++.. .|+. + ...++..|+++..+
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~--~---~~~~~~~g~~~~~~ 138 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPA--AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPT--Y---EVGARLAGATVVRA 138 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcc--cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCccc--H---HHHHHhcCCEEEec
Confidence 5667777766 4 5554 7999999999999988887568999987643 4442 2 23456679988766
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC-CCC---CC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG-PKD---MD 317 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~-g~~---m~ 317 (632)
+. .+++.. .+++++.++..+|+||..++.+ |+++|+++|+++++|.+... ..+ +.
T Consensus 139 ~~--------~~~l~~---------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 201 (364)
T PRK07865 139 DS--------LTELGP---------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVS 201 (364)
T ss_pred CC--------hhhCCc---------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCc
Confidence 31 122221 1358888888999999999864 66788999999999997542 110 01
Q ss_pred CCCCC----CCCCcEEEEccccccCCCCCceEEEEEeCCCcc
Q 006746 318 SFGLS----LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 318 ~ldls----~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
.++.. ..+-.+++.|+.|.||.+-..+|+++..++.++
T Consensus 202 ~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~ 243 (364)
T PRK07865 202 ILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVA 243 (364)
T ss_pred cccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHH
Confidence 11100 112348999999999853223677765555443
No 257
>PLN02624 ornithine-delta-aminotransferase
Probab=99.33 E-value=7.8e-10 Score=123.69 Aligned_cols=343 Identities=13% Similarity=0.130 Sum_probs=200.9
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.+..... .+. .. ..+...+..++++
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~------------------~~~--~~-----~~~~~~~la~~L~ 127 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTL------------------SSR--AF-----YNDKFPEFAEYLT 127 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCC------------------ccc--cc-----CCHHHHHHHHHHH
Confidence 57889998653 23367778876654432110 000 00 1234456777888
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-------CCCCe-EEE-eccccchhhHHHHHHH----HhcC-----CE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-------MSVKN-LLT-VYDYESEAVEAMIRTS----EKRG-----AR 241 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-------~~gd~-ilt-~~d~~s~~v~~~~~~a----~~~G-----~~ 241 (632)
++++.+ .+.|++++++|...+..--. + .+++. |+. ...||......+. .. .+.+ ..
T Consensus 128 ~~~~~~----~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~ 202 (474)
T PLN02624 128 SMFGYD----MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAIS-MSCDNEATRGFGPLLPG 202 (474)
T ss_pred hhcCCC----eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhh-cCCCccccccCCCCCCC
Confidence 888642 69999999998887664211 1 12333 554 3456753222221 10 0111 01
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
+..++. -+.+.+++.|... ..++..|++..+.+.+|..+| ++ +.++|+++|+++++|-+|.+ |..
T Consensus 203 ~~~~~~------~d~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Grt 273 (474)
T PLN02624 203 HLKVDF------GDLDALEKIFEED---GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLART 273 (474)
T ss_pred ceEeCC------CCHHHHHHHHHhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcC
Confidence 222322 1578888888642 235788999999999999999 88 99999999999999999872 321
Q ss_pred --CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 316 --MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 316 --m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
+...+.....||++++| |-+|.+...+|+++++++++..+.+...+
T Consensus 274 G~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~~~~~~~~~~------------------------------ 321 (474)
T PLN02624 274 GKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVMLCIKPGEHG------------------------------ 321 (474)
T ss_pred cchhhHHhcCCCCCEEEec--ccccCCCCcceeeeecHHHHhHhccCCcC------------------------------
Confidence 12333345679999986 96663113478888887665444321111
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.| |. .+.....+. .++|+.+.+. .+.++...+
T Consensus 322 -------~T--~~------------g~pl~~aaa------------------------~aaLe~l~~~---~l~~~~~~~ 353 (474)
T PLN02624 322 -------ST--FG------------GNPLASAVA------------------------MAALQVVQDE---KLAERSAKL 353 (474)
T ss_pred -------CC--CC------------CCHHHHHHH------------------------HHHHHHHHhc---hHHHHHHHH
Confidence 00 00 000001111 1567666543 456677888
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
..+|++.|.++... .|.+ ++. . ..+|.++.+.+.+..........+.+.+.++||.+..+
T Consensus 354 ~~~l~~~L~~l~~~----~~~~--i~~-v-rg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~------------ 413 (474)
T PLN02624 354 GQELRDQLQKIQKQ----FPKL--IKE-V-RGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPT------------ 413 (474)
T ss_pred HHHHHHHHHHHHHh----CCCc--eEE-E-EeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecC------------
Confidence 88888888876311 1211 111 0 12466666655432100011234444456678887421
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhcccc
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVE 616 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f~~ 616 (632)
+..+||+++++..|.+||+.+++.|++++..+-..
T Consensus 414 ----------------------------~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~ 448 (474)
T PLN02624 414 ----------------------------HDTIIRLAPPLSISEDELQECSKALSDVLEHDLPK 448 (474)
T ss_pred ----------------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 23589999999999999999999999998887554
No 258
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.32 E-value=1.7e-09 Score=120.36 Aligned_cols=175 Identities=18% Similarity=0.189 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
.+.+.+.+.++.-.|...+...|++|+++++||.+++..+ .++||.|++. ..|+ .+.+..+..|+++..||+|
T Consensus 136 ~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l-~~pGd~v~vE~PtY~-----~~~~~~~~~g~~~~~vp~d 209 (459)
T COG1167 136 ELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLL-LDPGDTVLVEDPTYP-----GALQALEALGARVIPVPVD 209 (459)
T ss_pred HHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCcH-----HHHHHHHHcCCcEEecCCC
Confidence 3444444444433344433338999999999999999998 6799998753 3444 4456678899999999997
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC----CCCCC-CC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PKDMD-SF 319 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~----g~~m~-~l 319 (632)
.+| +++++|++.+...+ ..-++++|..+|+||..++++ ++++|+++++++|-|-.-.. +.... ..
T Consensus 210 -~~G-~~~e~le~~~~~~~----~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~ 283 (459)
T COG1167 210 -EDG-IDPEALEEALAQWK----PKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLK 283 (459)
T ss_pred -CCC-CCHHHHHHHHhhcC----CcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChH
Confidence 444 89999999987632 236789999999999999987 67899999999999975221 11000 01
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
.+...+-=+++.||-|.+. |-..+|+|++.++.++.+
T Consensus 284 ~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~ 320 (459)
T COG1167 284 ALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKL 320 (459)
T ss_pred hhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHH
Confidence 2222234589999999877 235677777777665544
No 259
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.31 E-value=5.1e-10 Score=121.27 Aligned_cols=205 Identities=12% Similarity=0.150 Sum_probs=119.1
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||.++. |.-++.+++++.+.+.... . .+... ..+...+..+++.
T Consensus 27 ~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~--------~------------~~~~~-----~~~~~~~la~~l~ 81 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIW--------H------------VSNLF-----TNSLQEEVASLLA 81 (377)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc--------c------------ccccc-----CCHHHHHHHHHHH
Confidence 56789997554 5667778887665443210 0 00000 1133334444444
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC-CeEEE-eccccchhhHHHHHHHH---hcCC-----EEEEEeccCC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSV-KNLLT-VYDYESEAVEAMIRTSE---KRGA-----RVMSAEFSWP 250 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g-d~ilt-~~d~~s~~v~~~~~~a~---~~G~-----~v~~v~~~~~ 250 (632)
+..+. + .++|++++++|+..+.......+| ++|++ ...||.....++..... +.+. .+..++.
T Consensus 82 ~~~~~--~--~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 154 (377)
T PRK02936 82 ENSAG--D--LVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPF--- 154 (377)
T ss_pred hcCCC--C--EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCC---
Confidence 44332 2 699999999999988874321234 44654 45677644444431100 0000 1112221
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--CCCCCCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--MDSFGLS 322 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m~~ldls 322 (632)
-+++++++.+.++ ++++++..+.+.+|...+ ++ +.++|+++|+++++|-++.. +.. +..+...
T Consensus 155 ---~d~~~l~~~~~~~------~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~ 225 (377)
T PRK02936 155 ---NDIKALKEVMNEE------VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQF 225 (377)
T ss_pred ---CCHHHHHHhccCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhh
Confidence 1578888877643 588999888888887643 77 88999999999999998753 221 1111111
Q ss_pred CCCCcEEEEccccccCCCCCc--eEEEEEeCCCcccc
Q 006746 323 LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 357 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L 357 (632)
...+|.+ ++-|.+| + | +|++..+++..+.+
T Consensus 226 ~~~~di~--t~sK~l~--~-G~~ig~v~~~~~~~~~~ 257 (377)
T PRK02936 226 GLDPDIV--TVAKGLG--N-GIPVGAMIGKKELGTAF 257 (377)
T ss_pred CCCCcEE--EEccccc--C-CCccEEEEEcHHHHhhc
Confidence 2357854 5789877 2 4 78888777665544
No 260
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.30 E-value=9.3e-10 Score=126.41 Aligned_cols=173 Identities=16% Similarity=0.121 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+.++.+.+|+.|||+. ....|+|+|.|++.++.+. ..+||.||+.-+.|-+.+.. ...-.|++.+++...
T Consensus 173 eG~i~eAq~~AA~~fgAd~---tyFlvNGTS~gn~a~i~a~-~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~ 245 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNAL-LTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETA 245 (720)
T ss_pred ChHHHHHHHHHHHHhCCCc---eEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeecc
Confidence 3677899999999999974 5778899999999999988 68999998876655434443 123469999999765
Q ss_pred CCc----cccCH-----HHHHHHHHhcC-c---CCCceeEEEEeccCCCCccccchH-HHHH-HhhCCcEEEEeccccC-
Q 006746 249 WPR----LRINS-----EKLRKMVVSKG-K---KKKQRGLFVFPLHSRMTGARYPYL-WMRI-AQENDWHILIDACALG- 312 (632)
Q Consensus 249 ~~~----~~i~~-----~~l~~~i~~~~-~---~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~-a~~~g~~vlvDaaq~~- 312 (632)
... +.|+. +.|+++|.+.. . .++..++++++.. +.-|+.++++ |+++ ++..+ .++||-|+.+
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 421 23454 44998887651 1 1122477776654 5799999999 9988 68888 9999987654
Q ss_pred -CCCCCCC--CCC----CCCCc----EEEEccccccCCCCCceEEEEEeCCC
Q 006746 313 -PKDMDSF--GLS----LVRPD----FLICSFYQIFGENPSGFGCLFVKKST 353 (632)
Q Consensus 313 -g~~m~~l--dls----~~~~D----f~~~S~hK~~G~~P~G~G~L~Vr~~~ 353 (632)
+. .++ +++ ..++| +++-|.||+++. -+....|-++.+.
T Consensus 324 ~~F--~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~ 372 (720)
T PRK13578 324 EQF--IPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNH 372 (720)
T ss_pred hcc--CcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcc
Confidence 22 121 111 34789 999999998774 5667777776654
No 261
>PLN02231 alanine transaminase
Probab=99.28 E-value=1.8e-09 Score=122.20 Aligned_cols=132 Identities=11% Similarity=0.111 Sum_probs=98.2
Q ss_pred HHHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 173 SAMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.|+.|++++ |.+.+..+|++|+|+++|+.+++..+--.+||.|++.. .|+. . ...++..|++++.+++
T Consensus 171 ~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~--y---~~~~~~~g~~~v~~~l 245 (534)
T PLN02231 171 KGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPL--Y---SASIALHGGTLVPYYL 245 (534)
T ss_pred HHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChh--H---HHHHHHcCCEEEEEec
Confidence 36788888876 43322337999999999999999998324799977543 4442 1 2334668999999998
Q ss_pred cCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecc
Q 006746 248 SWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDAC 309 (632)
Q Consensus 248 ~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaa 309 (632)
+.. +..+++++|++.+.+......+++++++..-+|+||..++.+ |+++|+++|+++|.|-+
T Consensus 246 ~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEv 312 (534)
T PLN02231 246 DEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEV 312 (534)
T ss_pred CcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 733 246899999999976321122568888888899999999865 56788999999999985
No 262
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.28 E-value=2.4e-09 Score=114.10 Aligned_cols=157 Identities=11% Similarity=0.139 Sum_probs=107.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.|+++++.+ .|++|+|+++||.++.. ..+||+|++.. .|+ .....++..|++++.++.+
T Consensus 52 ~~Lr~~ia~~~~~~----~I~it~Gs~~al~~~~~---~~~gd~v~v~~P~y~-----~~~~~~~~~g~~~~~v~~~--- 116 (330)
T PRK05664 52 DGLEAAARAYYGAP----QLLPVAGSQAAIQALPR---LRAPGRVGVLSPCYA-----EHAHAWRRAGHQVRELDEA--- 116 (330)
T ss_pred HHHHHHHHHHhCCC----CEEECcCHHHHHHHHHH---ccCCCEEEEcCCChH-----HHHHHHHHcCCeEEEechh---
Confidence 47799999999863 69999999999999874 36899976543 443 3345677889999888653
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEeccccCCCCCCC-CCCCCCCC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACALGPKDMDS-FGLSLVRP 326 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq~~g~~m~~-ldls~~~~ 326 (632)
++.+.+. + ++++++..-+|+||..+|.+ + ++.|+++|+++++|-+-.-.....+ ..+...+-
T Consensus 117 ------~~~~~~~-~------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~ 183 (330)
T PRK05664 117 ------EVEAALD-S------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPG 183 (330)
T ss_pred ------hHhhhhc-C------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCC
Confidence 3444443 2 35677777789999999976 5 4556888999999987432110011 12221111
Q ss_pred cEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
=+++.||-|.||.+---+|+++..++.++.+
T Consensus 184 vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~ 214 (330)
T PRK05664 184 LIVLRSFGKFFGLAGARLGFVLAEPALLRAL 214 (330)
T ss_pred EEEEeeccccccCCCcceEEEEeCHHHHHHH
Confidence 2889999999996323478888776665544
No 263
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.26 E-value=1.6e-09 Score=115.80 Aligned_cols=160 Identities=13% Similarity=0.192 Sum_probs=113.0
Q ss_pred HHHHHHHHHHcC---CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 173 SAMKKRIMDFLN---ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 173 ~~~R~~ia~~l~---a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
.+.|+.|+++++ .+++ .|++|+|+++++.++...+ ++|++.. + ........++..|++++.+|.+
T Consensus 59 ~~Lr~aia~~~~~~~~~~~--~i~it~Ga~~~i~~~~~~~-----d~v~v~~--P--~y~~~~~~~~~~g~~~~~v~~~- 126 (335)
T PRK14808 59 EELIEKILSYLDTDFLSKN--NVSVGNGADEIIYVMMLMF-----DRSVFFP--P--TYSCYRIFAKAVGAKFLEVPLT- 126 (335)
T ss_pred HHHHHHHHHHhCCCCCCcc--eEEEcCCHHHHHHHHHHHh-----CcEEECC--C--CHHHHHHHHHHcCCeEEEecCC-
Confidence 478999999998 7665 7999999999999999987 4555432 3 1334456678899999999987
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccc--cCCCCCCCCCCCCCCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACA--LGPKDMDSFGLSLVRP 326 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq--~~g~~m~~ldls~~~~ 326 (632)
+++.++... +. .+++++++..+|+||..++.+ +.+++ ++++++++|-+- +.+..+.++ +....-
T Consensus 127 ~~~~~~~~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~-~~~~~~ 193 (335)
T PRK14808 127 KDLRIPEVN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDL-LKKYEN 193 (335)
T ss_pred CcCCCChhH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHH-HHhCCC
Confidence 444444322 21 237999999999999999999 88888 578999999863 222211111 111222
Q ss_pred cEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
=+++.|+-|.||.+-.-+|+++..++.++.+
T Consensus 194 vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l 224 (335)
T PRK14808 194 LAVIRTFSKAFSLAAQRIGYVVSSEKFIDAY 224 (335)
T ss_pred EEEEEechhhccCcccceEEEEeCHHHHHHH
Confidence 3788999999995323369999877665544
No 264
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.25 E-value=5e-09 Score=115.25 Aligned_cols=347 Identities=11% Similarity=0.102 Sum_probs=195.1
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..+. |--.+.+++++.+.+... + . . .+.. + ..+...+.-++++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~----~----~---~------~~~~----~---~~~~~~~lae~l~ 88 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADD----G----I---I------HSLD----M---ATEAKREFLETFN 88 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhc----c----c---e------eccc----c---CcHHHHHHHHHHH
Confidence 67889998544 677788888876644321 0 0 0 0000 0 1233345556666
Q ss_pred HHcCCCCC-CccEEEe-CCHHHHHHHHHhhCCCCCC-CeEEE-eccccchhhHHHHHH---HHhc--C---CEEEEEecc
Q 006746 181 DFLNISEN-DYGMVFT-ANRTSAFKLLAESYPFMSV-KNLLT-VYDYESEAVEAMIRT---SEKR--G---ARVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~~-ey~vvft-~naT~al~lv~~sl~~~~g-d~ilt-~~d~~s~~v~~~~~~---a~~~--G---~~v~~v~~~ 248 (632)
+.+..+.+ ...++|+ +++|+|...+.+--..-+| .+|++ ...||.....++.-. ..+. | ..+..+|+.
T Consensus 89 ~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~ 168 (412)
T TIGR02407 89 EIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYD 168 (412)
T ss_pred HhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCC
Confidence 65433321 1246674 8999988876654322234 34664 457886433332210 0011 1 123334432
Q ss_pred CCccc----cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc-c---hH-HHHHHhhCCcEEEEeccccC-CCC--C
Q 006746 249 WPRLR----INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-P---YL-WMRIAQENDWHILIDACALG-PKD--M 316 (632)
Q Consensus 249 ~~~~~----i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~-p---l~-i~~~a~~~g~~vlvDaaq~~-g~~--m 316 (632)
+.. -+.+.+++.|.+.......+..|.+.-+....|... | ++ +.++|+++|+++++|-+|.+ |.. +
T Consensus 169 --~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 246 (412)
T TIGR02407 169 --GYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTF 246 (412)
T ss_pred --CccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchh
Confidence 110 235667877864321113467777887888889854 3 33 56789999999999998862 210 1
Q ss_pred CCCCCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchh
Q 006746 317 DSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKS 394 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 394 (632)
-..+.....||++++| |.+| +.| +|+++++++. ..+.+...+
T Consensus 247 ~a~~~~~v~PDi~~~~--K~lg--~~G~pigav~~~~~~-~~~~~~~~~------------------------------- 290 (412)
T TIGR02407 247 FSFEPAGIEPDIVCLS--KSIS--GYGLPLALTLIKPEL-DVWKPGEHN------------------------------- 290 (412)
T ss_pred HHhcccCCCCCEEEec--hhcc--CCccceeEEEEchhh-hccCCCccC-------------------------------
Confidence 1223344589999877 9877 545 8999998775 333211100
Q ss_pred hhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHH
Q 006746 395 KQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLI 474 (632)
Q Consensus 395 ~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~ 474 (632)
+| |.+ |....... .+.|+.+ +.-+.+.+|++.+.
T Consensus 291 ------~T--~~g------------npl~~aaa------------------------~a~l~~~--i~~~~l~~~~~~~g 324 (412)
T TIGR02407 291 ------GT--FRG------------NNLAFVTA------------------------TAALEYY--WSDDAFEKAVQRKS 324 (412)
T ss_pred ------CC--CCc------------cHHHHHHH------------------------HHHHHHH--hcccHHHHHHHHHH
Confidence 00 000 00001111 1556642 22356788899999
Q ss_pred HHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 475 NWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 475 ~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
++|.++|..+.... |.+ + +. -...|.++.+.+.+. .....+.+.+.++||.+...
T Consensus 325 ~~l~~~l~~l~~~~----~~~-~-~~--vrg~Gl~~~l~l~~~----~~~~~~~~~~~~~Gv~v~~~------------- 379 (412)
T TIGR02407 325 EIIQERLDRIVAEY----PEL-I-KQ--VRGRGLMQGIECGDG----DLAGKIAKAAFENGLIIETS------------- 379 (412)
T ss_pred HHHHHHHHHHHhhC----CCc-e-Ee--eecceeEEEEEecCh----HHHHHHHHHHHHCCCEEecc-------------
Confidence 99999888763211 211 1 11 123566777777542 12234555556689887531
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.....+||+++.+..|.+||+++++.+++.|+
T Consensus 380 -------------------------~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 380 -------------------------GPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred -------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 01235899999999999999999999998875
No 265
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.25 E-value=3.4e-10 Score=122.04 Aligned_cols=158 Identities=13% Similarity=0.126 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEecc-ccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYD-YESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d-~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
.+...++++.+=|+. ..+.++++-.|+..+..++ +++||+|+...+ |.. ....+..+.++.|+++.++...
T Consensus 65 ~~~lE~~~a~LEg~~----~~~afsSGmaAI~~~~l~l-l~~GD~vl~~~~~YG~-t~~~~~~~l~~~gi~~~~~d~~-- 136 (396)
T COG0626 65 RDALEEALAELEGGE----DAFAFSSGMAAISTALLAL-LKAGDHVLLPDDLYGG-TYRLFEKILQKFGVEVTFVDPG-- 136 (396)
T ss_pred HHHHHHHHHHhhCCC----cEEEecCcHHHHHHHHHHh-cCCCCEEEecCCccch-HHHHHHHHHHhcCeEEEEECCC--
Confidence 345667777777764 3556678889999988888 788999876554 554 5555667778899999988653
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEE
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFL 329 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~ 329 (632)
+.+++.+++.+ +++++|.+-..+|++-...||. ++++||++|+.++||-+=+-|.-..||++ ++|++
T Consensus 137 ----~~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~---GaDIV 204 (396)
T COG0626 137 ----DDEALEAAIKE-----PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLEL---GADIV 204 (396)
T ss_pred ----ChHHHHHHhcc-----cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChhhc---CCCEE
Confidence 34566666653 1359999999999999999999 99999999999999998766654357765 89999
Q ss_pred EEccccccCCCCCceEEEEE
Q 006746 330 ICSFYQIFGENPSGFGCLFV 349 (632)
Q Consensus 330 ~~S~hK~~G~~P~G~G~L~V 349 (632)
+=|.-|.+|.+--=+|.+++
T Consensus 205 vhSaTKyl~GHsDvl~G~v~ 224 (396)
T COG0626 205 VHSATKYLGGHSDVLGGVVL 224 (396)
T ss_pred EEeccccccCCcceeeeEEe
Confidence 99999977643333455555
No 266
>PRK05839 hypothetical protein; Provisional
Probab=99.25 E-value=8.6e-10 Score=119.63 Aligned_cols=168 Identities=13% Similarity=0.130 Sum_probs=108.6
Q ss_pred HHHHHHHHH----cC--CCCCCccEEEeCCHHHHHHHHHhhCCC-CCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDF----LN--ISENDYGMVFTANRTSAFKLLAESYPF-MSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~----l~--a~~~ey~vvft~naT~al~lv~~sl~~-~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
+.|+.|+++ .| ++++ .|++|+|+++|+.+++..+-+ .+|+.|++. -.|+. ....++..|++++.+
T Consensus 64 ~lr~aia~~l~~~~g~~~~~~--~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~-----~~~~~~~~g~~v~~v 136 (374)
T PRK05839 64 SLREAQRGFFKRRFKIELKEN--ELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQI-----YEGAAIASRAKVLLM 136 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchh-----hHHHHHhcCCEEEEe
Confidence 445555444 46 4554 799999999999999887644 578887754 33432 233456789999999
Q ss_pred eccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc--CC-CCCC
Q 006746 246 EFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL--GP-KDMD 317 (632)
Q Consensus 246 ~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~--~g-~~m~ 317 (632)
+.+.. ...++.++. .+ + +++++.++..+|+||..+|.+ |+++|+++|+++|+|-+-. .. ....
T Consensus 137 ~~~~~~~~~~d~~~~--~~-~------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~ 207 (374)
T PRK05839 137 PLTKENDFTPSLNEK--EL-Q------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPP 207 (374)
T ss_pred ecccccCCcCCcchh--hh-c------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCC
Confidence 98622 233443332 12 2 258999999999999999876 4567889999999998632 11 0000
Q ss_pred C-CCC------CCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 318 S-FGL------SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 318 ~-ldl------s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
+ +++ ...+-=+++.|+-|.||.+-.-+|+++..++.++.+
T Consensus 208 s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~ 254 (374)
T PRK05839 208 SLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKY 254 (374)
T ss_pred CHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHH
Confidence 1 111 111223888999998886434568888766554433
No 267
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.24 E-value=7.1e-09 Score=119.08 Aligned_cols=167 Identities=11% Similarity=0.022 Sum_probs=117.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+.++.+.+|+.|||+. ....|+|+|.+++.++.+. ..+||.||..-..|-+.+..| .-.|+++++++..
T Consensus 194 ~G~i~eAe~~aA~~fgAd~---tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~~aL----ilsga~PVYl~P~ 265 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQ---SYIVTNGTSTSNKIVGMYA-APAGSTLLIDRNCHKSLAHLL----MMSDVVPIWLKPT 265 (713)
T ss_pred ChHHHHHHHHHHHHhCCCc---EEEEeCChHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH----HHcCCeeEEeccc
Confidence 3677899999999999974 5778899999999999988 799999988765554344443 4469999999765
Q ss_pred CCc----cccCH-----HHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEE-EEeccccC--CCC
Q 006746 249 WPR----LRINS-----EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHI-LIDACALG--PKD 315 (632)
Q Consensus 249 ~~~----~~i~~-----~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~v-lvDaaq~~--g~~ 315 (632)
+.. +.++. +.|+++|.+.... ++++.++++.. +.-|+.++++ |++.+ |+.+ +||.|+.+ ..
T Consensus 266 ~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F- 339 (713)
T PRK15399 266 RNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHF- 339 (713)
T ss_pred ccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhc-
Confidence 321 23444 8999999865321 23355555554 7899999999 88888 6766 69987654 21
Q ss_pred CCC--CCCCCC----CCcEE---EEccccccCCCCCceEEEEEeC
Q 006746 316 MDS--FGLSLV----RPDFL---ICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 316 m~~--ldls~~----~~Df~---~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
.+ .+.+.. ++|.+ +-|.||.++. -+-...|-|+.
T Consensus 340 -~p~~~~~sam~~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~ 382 (713)
T PRK15399 340 -HPIYQGKSGMSGERVPGKVIFETQSTHKMLAA-FSQASLIHIKG 382 (713)
T ss_pred -CcccCCcChhhCCCCCCeeeeeeeehhccccc-cchheeeeecC
Confidence 11 111221 35666 9999997775 66777777754
No 268
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.24 E-value=1.4e-08 Score=115.74 Aligned_cols=213 Identities=13% Similarity=0.070 Sum_probs=143.1
Q ss_pred eEeecCCCCCCCHHHHHHHhc-CCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 110 TCLDYFGIGLFSYNQLHKQES-SPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 110 vyLD~ag~gl~~~~~~~a~~~-~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
-|+-|.-..+.+.+++-.+.. ..+.... .|+ .+-....++.++-+.+++++|-++.
T Consensus 85 ry~ghm~~~~~~paila~~~a~~~N~n~~-----~~e------------------~SP~~t~lE~~vi~~la~l~G~~~~ 141 (608)
T TIGR03811 85 RYWGHMNSETLMPAILAYNYAMLWNGNNV-----AYE------------------SSPATSQMEEEVGKEFATLMGYKNG 141 (608)
T ss_pred ceEEECcCCCCHHHHHHHHHHHHhCCCCC-----ccc------------------cCchHHHHHHHHHHHHHHHhCCCCC
Confidence 588888888888888766432 1111000 011 1223467888999999999998753
Q ss_pred CccEEEeCCHHHHHHH---HHhhC---CC--CC-------------------------------------------CC--
Q 006746 189 DYGMVFTANRTSAFKL---LAESY---PF--MS-------------------------------------------VK-- 215 (632)
Q Consensus 189 ey~vvft~naT~al~l---v~~sl---~~--~~-------------------------------------------gd-- 215 (632)
.=+||+++|.|.-. +|+.. |+ +. |.
T Consensus 142 --~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~ 219 (608)
T TIGR03811 142 --WGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDL 219 (608)
T ss_pred --CeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhcccccccc
Confidence 34589999988653 33332 21 00 00
Q ss_pred ----eEEEecc-ccchhhHHHHHHHHhcCC---EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcc
Q 006746 216 ----NLLTVYD-YESEAVEAMIRTSEKRGA---RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA 287 (632)
Q Consensus 216 ----~ilt~~d-~~s~~v~~~~~~a~~~G~---~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~ 287 (632)
+++++.. |.| | ...+.-.|+ .|+.||++ +++++|+++|++.|.+.......+-.|+-+.-++.+|.
T Consensus 220 ~~~~~vl~s~~aHyS----~-~KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Ga 293 (608)
T TIGR03811 220 QKLGKWLVPQTKHYS----W-LKAADIIGIGLDQVIPVPVD-SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGA 293 (608)
T ss_pred ccceEEEECCCccHH----H-HHHHHHcCCCcccEEEeecC-CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcc
Confidence 2344444 443 3 345566787 58899998 78899999999999864322334556777899999999
Q ss_pred ccchH-HHHHH---hhCCc--EEEEeccccCCC-CC--------CCCC------------------CC---------CCC
Q 006746 288 RYPYL-WMRIA---QENDW--HILIDACALGPK-DM--------DSFG------------------LS---------LVR 325 (632)
Q Consensus 288 ~~pl~-i~~~a---~~~g~--~vlvDaaq~~g~-~m--------~~ld------------------ls---------~~~ 325 (632)
+=|++ |+++| +++|+ +++||||-.+.. .| .+.+ ++ .-+
T Consensus 294 iDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ 373 (608)
T TIGR03811 294 VDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISE 373 (608)
T ss_pred cCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcC
Confidence 99999 99988 66786 799999854411 00 0110 11 137
Q ss_pred CcEEEEccccccCCCCCceEEEEEeCCCc
Q 006746 326 PDFLICSFYQIFGENPSGFGCLFVKKSTV 354 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~ 354 (632)
+|-+++.+||++.. |.+.|++++|+..+
T Consensus 374 ADSItvDpHK~g~~-Py~~G~ll~Rd~~~ 401 (608)
T TIGR03811 374 AESVTIDPHKMGYI-PYSAGGIVIQDIRM 401 (608)
T ss_pred ceEEEeCccccccc-CCCeEEEEEeCHHH
Confidence 89999999998887 99999999998753
No 269
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.23 E-value=1.6e-09 Score=118.63 Aligned_cols=163 Identities=13% Similarity=0.110 Sum_probs=108.7
Q ss_pred HHHHHHHHHHc---CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCC--------
Q 006746 173 SAMKKRIMDFL---NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGA-------- 240 (632)
Q Consensus 173 ~~~R~~ia~~l---~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~-------- 240 (632)
.+.|+.|++++ +++++ .|++|+|+++++.++.. + +.+||+|++. ..|+. ....++..|+
T Consensus 78 ~~lr~aia~~~~~~~~~~d--~I~it~Ga~~al~~l~~-l-~~~gd~Vlv~~P~y~~-----~~~~~~~~g~~~~~~~~~ 148 (402)
T TIGR03542 78 PFLREAIAENDYRGRIDPE--EIFISDGAKCDVFRLQS-L-FGSDNTVAVQDPVYPA-----YVDSNVMAGRAGVLDDDG 148 (402)
T ss_pred HHHHHHHHHHHHhcCCCHH--HEEECCCcHHHHHHHHH-h-cCCCCEEEEeCCCCcc-----hHHHHHHcCCcccccccc
Confidence 36888888876 67765 79999999999998754 4 4789997654 34442 2345667888
Q ss_pred ---EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC-
Q 006746 241 ---RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG- 312 (632)
Q Consensus 241 ---~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~- 312 (632)
++..++.+... ....+ +.+ ..+++++.++..+|+||..++ ++ |+++|+++|+++++|-+..-
T Consensus 149 ~~~~~~~v~~~~~~-~~~~~-~~~--------~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~ 218 (402)
T TIGR03542 149 RYSKITYLPCTKEN-NFIPD-LPE--------EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAF 218 (402)
T ss_pred ccceEEEeecchhh-CCCCC-ccc--------cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhh
Confidence 88888875221 12211 111 123588999999999999999 55 77889999999999997432
Q ss_pred -CCCCCCCCCCCC----CCcEEEEccccccCCCCCceEEEEEeCCCc
Q 006746 313 -PKDMDSFGLSLV----RPDFLICSFYQIFGENPSGFGCLFVKKSTV 354 (632)
Q Consensus 313 -g~~m~~ldls~~----~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~ 354 (632)
..+..+..+..+ ..-+++.|+-|.||.+.-.+|++++.++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~ 265 (402)
T TIGR03542 219 ISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELT 265 (402)
T ss_pred ccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHh
Confidence 110011112111 123678899999985333468888876643
No 270
>PRK06855 aminotransferase; Validated
Probab=99.22 E-value=5.2e-09 Score=115.85 Aligned_cols=165 Identities=14% Similarity=0.101 Sum_probs=111.1
Q ss_pred HHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ | ++++ +|++|+|+++||.+++. + ..+||+|++. -.|+. ... . .....|++++.++
T Consensus 77 ~LReaia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~-l-~~~Gd~Vlv~~P~Y~~--~~~-~-~~~~~g~~~v~v~ 148 (433)
T PRK06855 77 ETREFLAELNNKRGGAQITPD--DIIFFNGLGDAIAKIYG-L-LRREARVIGPSPAYST--HSS-A-EAAHAGYPPVTYR 148 (433)
T ss_pred HHHHHHHHHHHhccCCCCCHh--HEEEcCcHHHHHHHHHH-h-cCCCCeEEEeCCCCch--HHH-H-HHHhcCCeEEEEe
Confidence 6777777776 3 4554 79999999999999985 5 6889997754 35543 111 1 1234588888888
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc--C--CCCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL--G--PKDMD 317 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~--~--g~~m~ 317 (632)
.+.. ...+++++|++.+... ++++++.++..+|+||..++.+ |+++|+++|+++|.|-+-. . +....
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~~----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~ 224 (433)
T PRK06855 149 LDPENNWYPDLDDLENKVKYN----PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTV 224 (433)
T ss_pred cccccCCCCCHHHHHHHHhcC----CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCC
Confidence 7632 3358999999988632 1347788888899999999976 4667899999999998632 1 21111
Q ss_pred CC-CCCCCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 318 SF-GLSLVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 318 ~l-dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
++ .+..-..-+++.|+-|.|+.+---+|++++.
T Consensus 225 sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p 258 (433)
T PRK06855 225 PLSEVIGDVPGIALKGISKELPWPGSRCGWIEVY 258 (433)
T ss_pred CHHHHcCcCCeEEEecCccccCCCcceEEEEEEe
Confidence 11 1111112388999999888533346777763
No 271
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.22 E-value=1e-08 Score=113.20 Aligned_cols=349 Identities=11% Similarity=0.082 Sum_probs=193.8
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..++ |--.+.+.+++.+.+... + ++. +. . + ......+.-++++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~----~--~~~-----------~~--~--~---~~~~~~~lae~l~ 92 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRD----G--ITH-----------GL--D--M---HTTAKREFLETFE 92 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhc----c--ccc-----------cc--c--c---CcHHHHHHHHHHH
Confidence 67889997444 566678888876544321 0 000 00 0 0 1122334555666
Q ss_pred HHcCCCC-CCccEEEe-CCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHH---HHhc--CC---EEEEEecc
Q 006746 181 DFLNISE-NDYGMVFT-ANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRT---SEKR--GA---RVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~-~ey~vvft-~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~---a~~~--G~---~v~~v~~~ 248 (632)
+.+..+. -++.+.|+ +++|+|...+++--..-+|+ +|++ ...||......|.-. ..+. |. .+..+|..
T Consensus 93 ~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~ 172 (425)
T PRK09264 93 ETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYD 172 (425)
T ss_pred HhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCC
Confidence 6554332 12246674 79999888765432211343 4654 456776433222110 0111 11 34455542
Q ss_pred CC-cc-ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc----chH-HHHHHhhCCcEEEEeccccC-CC--CCCC
Q 006746 249 WP-RL-RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY----PYL-WMRIAQENDWHILIDACALG-PK--DMDS 318 (632)
Q Consensus 249 ~~-~~-~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~----pl~-i~~~a~~~g~~vlvDaaq~~-g~--~m~~ 318 (632)
.. .. .-+.+++++.|.+.......+..|++.-+....|... .++ +.++|+++|+++++|-+|.+ |. .+..
T Consensus 173 ~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~ 252 (425)
T PRK09264 173 GYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFS 252 (425)
T ss_pred CccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHH
Confidence 10 00 1256778888864321113467778877777788766 367 88999999999999998853 21 0112
Q ss_pred CCCCCCCCcEEEEccccccCCCCCce--EEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGF--GCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~--G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
.+.....||++++| |.+| +.|+ |+++++++. ..+.+...+
T Consensus 253 ~~~~~v~PDi~t~~--K~l~--~~G~pigav~~~~~i-~~~~~~~~~--------------------------------- 294 (425)
T PRK09264 253 FERAGITPDIVTLS--KSIS--GYGLPMALVLIKPEL-DVWKPGEHN--------------------------------- 294 (425)
T ss_pred HhhcCCCCCEEEec--cccC--CCccceEEEEEchhh-hccCCCccC---------------------------------
Confidence 22223578988886 9777 5464 999998775 222211100
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHH-HHHHhhCHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGL-DQVDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aL-d~~~~~Gl~~I~~r~~~L~~ 475 (632)
+| |.+ |.....+. .++| +.+. -+.+.+|++.+.+
T Consensus 295 ----~T--~~g------------np~~~aaa------------------------~a~l~~~~~---~~~l~~~~~~~g~ 329 (425)
T PRK09264 295 ----GT--FRG------------NNLAFVTA------------------------TAALEEYWS---DDAFEKEVKAKGE 329 (425)
T ss_pred ----CC--CCC------------CHHHHHHH------------------------HHHHHHHHh---hhHHHHHHHHHHH
Confidence 01 000 00001111 1455 2322 2467888999999
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 555 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~ 555 (632)
+|.+.|.++.-. .|.+ + +. . ...|.++.+.+.+. -....+.+.+.++||.++.+
T Consensus 330 ~l~~~l~~l~~~----~~~~-~-~~-v-rg~Gl~~~i~l~~~----~~~~~l~~~~~~~Gv~~~~~-------------- 383 (425)
T PRK09264 330 LVRERLEEIAAK----YPGL-G-AE-V-RGRGMMQGIDFGDG----ELAGKIAAEAFENGLIIETS-------------- 383 (425)
T ss_pred HHHHHHHHHHHh----CCCc-e-ec-c-eecccEEEEEecCh----HHHHHHHHHHHHCCCEEecc--------------
Confidence 999988876211 1222 1 11 1 12466767776541 12234455556678887531
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....+||+++.+..|.+||+++++.|.+.|..
T Consensus 384 ------------------------~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 384 ------------------------GPEDEVVKLLPPLTIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred ------------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 012358999999999999999999999998865
No 272
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.21 E-value=1.1e-08 Score=112.15 Aligned_cols=205 Identities=12% Similarity=0.190 Sum_probs=122.2
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|+|.++ .|.-.+.+.+++.+.+++. +.. .+. + ..+...+..++++
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~--------~~~---------~~~-----~---~~~~~~~l~~~l~ 92 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKL--------WHI---------SNV-----F---TNEPALRLAKKLI 92 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhc--------Ccc---------cCc-----c---CCHHHHHHHHHHH
Confidence 5788999866 5677778888766543221 000 110 0 1123347778888
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEE-EeccccchhhHHHHHHH------H---hcCCEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLL-TVYDYESEAVEAMIRTS------E---KRGARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~il-t~~d~~s~~v~~~~~~a------~---~~G~~v~ 243 (632)
++++.+ .+.|+.++++|...+..-.. + ..++ +|+ ....||......+ ... . .....+.
T Consensus 93 ~~~~~~----~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~ 167 (403)
T PRK05093 93 DATFAE----RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTV-SVGGQPKYSDGFGPKPADIT 167 (403)
T ss_pred hhCCCC----EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhH-hhcCChhhhhcCCCCCCCcE
Confidence 877542 69999999998887765321 1 1233 354 4556776333221 110 0 0112233
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD-- 315 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~-- 315 (632)
.++. -|.+++++.+.++ ++++++.-+....|...| ++ +.++|+++|+++++|-++.. +..
T Consensus 168 ~~~~------~d~~~l~~~l~~~------~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~ 235 (403)
T PRK05093 168 HVPF------NDLAAVKAVIDDH------TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD 235 (403)
T ss_pred EeCC------CCHHHHHHHhcCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc
Confidence 3332 1678888888643 577888766665665544 77 88999999999999998652 221
Q ss_pred CCCCCCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccC
Q 006746 316 MDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 358 (632)
Q Consensus 316 m~~ldls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~ 358 (632)
+.........||++ ++=|.+| | | +|+++.+++.++.+.
T Consensus 236 ~~~~~~~~~~pdi~--s~sK~l~--~-G~rig~vv~~~~i~~~l~ 275 (403)
T PRK05093 236 LFAYMHYGVTPDIL--TSAKALG--G-GFPIGAMLTTAEIASHFK 275 (403)
T ss_pred chhhhhcCCCCCEE--Eeccccc--C-CcceEEEEEcHHHHhhcC
Confidence 11122223468865 4569777 3 5 899998887766554
No 273
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.21 E-value=1.9e-09 Score=118.46 Aligned_cols=168 Identities=17% Similarity=0.155 Sum_probs=104.1
Q ss_pred HHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCC----CCCCeEEE--eccccchhhHHHHHHHHhcC--
Q 006746 174 AMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPF----MSVKNLLT--VYDYESEAVEAMIRTSEKRG-- 239 (632)
Q Consensus 174 ~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~----~~gd~ilt--~~d~~s~~v~~~~~~a~~~G-- 239 (632)
+.|+.|++++ | ++++ .|++|+|+++|+.+++..+.- .+||.|++ ...|+. .. ..++..|
T Consensus 78 ~LR~aia~~~~~~~g~~v~~~--~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~--y~---~~~~~~~~~ 150 (416)
T PRK09440 78 ELIEALAALLNERYGWNISPQ--NIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIG--YA---DAGLEEDLF 150 (416)
T ss_pred HHHHHHHHHHHHHhCCCCChh--hEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchh--hH---HHhhccCce
Confidence 5677777776 3 5655 799999999999999998832 35888766 345542 11 1122122
Q ss_pred --CEEEEEeccCC--ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc
Q 006746 240 --ARVMSAEFSWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL 311 (632)
Q Consensus 240 --~~v~~v~~~~~--~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~ 311 (632)
..+..++++.. ...+++++|+ +.+ ++++++++..+|+||..++.+ |+++|+++++++++|-+-.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~ 222 (416)
T PRK09440 151 VSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYG 222 (416)
T ss_pred eecccccccccccccccCCCHHHcc--cCC------CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcc
Confidence 22233333311 1357888876 222 358999999999999999954 6778899999999999864
Q ss_pred CCCC-CCCCCCCC--CCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 312 GPKD-MDSFGLSL--VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 312 ~g~~-m~~ldls~--~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
.... ..-.++.. .+-=+++.|+-|. +.+-.-+|+++..+++++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~ 270 (416)
T PRK09440 223 PPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEAL 270 (416)
T ss_pred ccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHH
Confidence 3210 00011110 1122778899995 65333468777666554433
No 274
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.20 E-value=4.3e-10 Score=113.81 Aligned_cols=294 Identities=14% Similarity=0.140 Sum_probs=191.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHH-HHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAM-IRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~-~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+..+++|+++|-. .-.|++++|.+..+.+..---++|.+|+..+..| .+.|= ..++.-.|+.++.+... ++
T Consensus 59 ~rLE~~vA~l~GKE----AgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~H--I~~~E~gg~s~l~gv~~~tv~~e-~d 131 (384)
T KOG1368|consen 59 NRLEQRVAELFGKE----AGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAH--IHRYEQGGISQLAGVHVRTVKNE-ND 131 (384)
T ss_pred HHHHHHHHHHhCcc----ceeeecccccccHHHHHHHhcCCCceEEeccchh--eeehhccChhhhccceeEeeeeC-CC
Confidence 36778899999964 3568899999988877765456898987665433 23331 12334457888888776 78
Q ss_pred cccCHHHHHHHHHhcCcC--CCceeEEEEeccCCCCc-cccchH-H---HHHHhhCCcEEEEeccccCCCC-CCCCCCCC
Q 006746 252 LRINSEKLRKMVVSKGKK--KKQRGLFVFPLHSRMTG-ARYPYL-W---MRIAQENDWHILIDACALGPKD-MDSFGLSL 323 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~--~~~~~Lv~~~~~sn~TG-~~~pl~-i---~~~a~~~g~~vlvDaaq~~g~~-m~~ldls~ 323 (632)
+.+++++|+.+|...... .+.++|+++-.-.+.+| ..+|++ + .++|+++|+.+.+|+|-..-.. -..+.+++
T Consensus 132 gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~ 211 (384)
T KOG1368|consen 132 GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKK 211 (384)
T ss_pred CeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHH
Confidence 899999999999854312 35789999999888888 889999 3 3568999999999986444110 00122222
Q ss_pred C--CCcEEEEccccccCCCCCceEEEEE-eCCCccccC---CCCCCCceeecccccccccccccCCCCCCccccchhhhh
Q 006746 324 V--RPDFLICSFYQIFGENPSGFGCLFV-KKSTVPILV---DNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE 397 (632)
Q Consensus 324 ~--~~Df~~~S~hK~~G~~P~G~G~L~V-r~~~~~~L~---~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e 397 (632)
+ -.|-+...+-|-+|. |- |=++| +++.+++.+ ....||+
T Consensus 212 i~~~fDSVsiCLSKglgA-PV--GSViVG~k~FI~kA~~~RKalGGGm-------------------------------- 256 (384)
T KOG1368|consen 212 ICSAFDSVSICLSKGLGA-PV--GSVIVGSKDFIDKARHFRKALGGGM-------------------------------- 256 (384)
T ss_pred HHHhhhhhhhhhhccCCC-Cc--ccEEEccHHHHHHHHHHHHHhcCch--------------------------------
Confidence 2 458899999998887 64 43444 455544322 1122222
Q ss_pred hhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHH
Q 006746 398 KVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWL 477 (632)
Q Consensus 398 ~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L 477 (632)
||.|...- .+| -+|++... -+..-++|.+.|++++
T Consensus 257 ----------------RQsGvLaa---aaL-------------------------val~~~~~-~L~~dHk~A~~lAe~~ 291 (384)
T KOG1368|consen 257 ----------------RQSGVLAA---AAL-------------------------VALDENVP-LLRADHKRAKELAEYI 291 (384)
T ss_pred ----------------hHHHHHHH---HHH-------------------------HHhhcchH-HHHHHHHHHHHHHHHh
Confidence 11111100 111 23333322 1455567777777766
Q ss_pred HHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhh
Q 006746 478 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 557 (632)
Q Consensus 478 ~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~ 557 (632)
. ++ +.+++--| .-...++..++.-. .+.++.+.+.++++||.+-.|
T Consensus 292 ~----~~--------~~i~v~v~---a~etNiv~~~l~q~---~~~~~~l~~~~~k~gi~lm~~---------------- 337 (384)
T KOG1368|consen 292 N----TP--------EEIRVEVP---AVETNIVNMVLCQA---RLTAEELCKFLEKNGILLMGG---------------- 337 (384)
T ss_pred c----cc--------cceeeecc---hhhcceeeeecccc---cCCHHHHHHHHHHCCeEEeec----------------
Confidence 5 33 33555444 23567887777543 389999999999999988643
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH-Hhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA-QFLD 611 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~-~~l~ 611 (632)
....+|++||+--|.+||+.++..+. +|+.
T Consensus 338 ------------------------~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~ 368 (384)
T KOG1368|consen 338 ------------------------ASRRIRIVLHHQVTDEDVEYVKSVLSKKFLK 368 (384)
T ss_pred ------------------------cccceEEEEEEecCHHHHHHHHHHHHHHHHh
Confidence 12259999999999999999999994 4443
No 275
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.20 E-value=5.4e-09 Score=120.10 Aligned_cols=312 Identities=12% Similarity=0.053 Sum_probs=194.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+.++.+.+|+.|||+. ....|+|+|.|++.++.+. ..+||.||..-..|-+.+..| .-.|++.++++..
T Consensus 194 ~G~i~eAe~~AA~~fgAd~---tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~haL----ilsga~PVYl~P~ 265 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADR---SYMVTNGTSTANKIVGMYS-APAGSTVLIDRNCHKSLTHLM----MMSDVTPIYFRPT 265 (714)
T ss_pred ChHHHHHHHHHHHHhCCCc---EEEEeCchHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH----HHcCCeEEEeccc
Confidence 3677899999999999974 5777899999999999887 789999988765554344443 4479999999765
Q ss_pred CCc----cccC-----HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC--CCCC
Q 006746 249 WPR----LRIN-----SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG--PKDM 316 (632)
Q Consensus 249 ~~~----~~i~-----~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~--g~~m 316 (632)
+.. +.++ .+.|++.|.+.... +++..++++. ++.-|+.++++ |+++++.++ ++||.|+.+ ..
T Consensus 266 rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~-pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F-- 339 (714)
T PRK15400 266 RNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITN-STYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNF-- 339 (714)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEEC-CCCccEecCHHHHHHHhCCCC--EEEEccchhhhcc--
Confidence 422 2344 89999999865321 2223455544 47899999999 999999887 689987654 11
Q ss_pred CC-C-CCCC--CCC---c--EEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCC
Q 006746 317 DS-F-GLSL--VRP---D--FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETE 387 (632)
Q Consensus 317 ~~-l-dls~--~~~---D--f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e 387 (632)
.+ + +.+. .+. | |++-|.||.++. -+-...|-|+... ..
T Consensus 340 ~p~~~~~sam~~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~v----d~---------------------------- 386 (714)
T PRK15400 340 SPIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDV----NE---------------------------- 386 (714)
T ss_pred CcccCCcChhhcCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCC----CH----------------------------
Confidence 11 1 1121 123 5 999999997774 4455555443321 00
Q ss_pred ccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHh-hCHHHH
Q 006746 388 PEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDS-LGLTMI 466 (632)
Q Consensus 388 ~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~-~Gl~~I 466 (632)
.++.+.. ..-++..|..+.+++|+ .|..++.. .| ...
T Consensus 387 -----~~~n~a~------------~m~~STSPsY~l~ASLD------------------------~a~~~m~~~~G-~~l 424 (714)
T PRK15400 387 -----ETFNEAY------------MMHTTTSPHYGIVASTE------------------------TAAAMMKGNAG-KRL 424 (714)
T ss_pred -----HHHHHHH------------HHHcCCCcHHHHHHHHH------------------------HHHHHHHhhhh-HHH
Confidence 0111100 00012235566667776 66666664 44 556
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCC------------------------CCC-cEEEEEEcc--CCC
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRF------------------------DRG-PALAFNVFD--WKR 519 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~------------------------~rg-~ivaFnv~~--~~G 519 (632)
.++...++..+++.|.+++... +++ -+++++|..-. .-. -=|++..++ .+|
T Consensus 425 ~~~~i~~a~~~R~~l~~~~~~~-~~w-~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g 502 (714)
T PRK15400 425 INGSIERAIKFRKEIKRLRTES-DGW-FFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDG 502 (714)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc-cCc-eEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCc
Confidence 6777778888899998873200 000 04555543100 001 112233322 222
Q ss_pred C----ccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCC
Q 006746 520 E----KIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLAN 595 (632)
Q Consensus 520 ~----~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t 595 (632)
+ .++...|.+.++++||.+-- .....|=+=++..+|
T Consensus 503 ~~~~~Gipg~~v~~~L~e~gI~~E~----------------------------------------~d~~~iLfl~s~g~t 542 (714)
T PRK15400 503 TMSDFGIPASIVAKYLDEHGIVVEK----------------------------------------TGPYNLLFLFSIGID 542 (714)
T ss_pred cccccCCCHHHHHHHHHHcCCEEEe----------------------------------------cCCCeEEEEeCCCCC
Confidence 2 26777888888888887631 123466666778899
Q ss_pred HHHHHHHHHHHHHhhh
Q 006746 596 FEDVYRLWAFVAQFLD 611 (632)
Q Consensus 596 ~eDV~rlv~~l~~~l~ 611 (632)
.+++++|++.|.+|-+
T Consensus 543 ~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 543 KTKALSLLRALTDFKR 558 (714)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998833
No 276
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.19 E-value=1.6e-08 Score=110.70 Aligned_cols=332 Identities=12% Similarity=0.138 Sum_probs=193.3
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|+|.++ .|.-.+.+.+++.+.+... +. + +. . + ..+...+..++++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~--------~~---~------~~---~--~---~~~~~~~la~~L~ 87 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKL--------WH---I------GN---G--Y---TNEPVLRLAKKLV 87 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhc--------cc---c------cC---c--c---CCHHHHHHHHHHH
Confidence 5678999866 5666778888776543321 00 0 00 0 0 1244567888888
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CC-----CCC-eEE-EeccccchhhHHHHHHHHh----c-----CCEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FM-----SVK-NLL-TVYDYESEAVEAMIRTSEK----R-----GARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~-----~gd-~il-t~~d~~s~~v~~~~~~a~~----~-----G~~v~ 243 (632)
++++.+ .+.|++++++|...++.... +. +|. +|+ ....||......+. .... . ...+.
T Consensus 88 ~~~~~~----~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (397)
T TIGR03246 88 DATFAD----KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVS-VGGQPKYSQGFAPLPGGIK 162 (397)
T ss_pred hhCCCC----EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHH-hcCCcccccCCCCCCCceE
Confidence 887642 69999999999988776541 11 233 455 45577764333221 1100 0 01222
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD-- 315 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~-- 315 (632)
.++. -|.+++++.|.++ +++|++.-+.+..|...| ++ +.++|+++|+++++|-++.+ |..
T Consensus 163 ~~~~------~d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~ 230 (397)
T TIGR03246 163 HAPY------NDLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE 230 (397)
T ss_pred EeCC------CCHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc
Confidence 2322 2678898888643 588888888888887653 66 78899999999999998742 211
Q ss_pred CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhh
Q 006746 316 MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 316 m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
+.....-...||++ ++=|.+|. --=+|++..+++.++.+.....+
T Consensus 231 ~~a~~~~gv~pDi~--t~~K~lgg-G~pigav~~~~~i~~~~~~~~~~-------------------------------- 275 (397)
T TIGR03246 231 LYAYMHYGVTPDIL--TSAKALGG-GFPIGAMLTTTEIAAHLKVGTHG-------------------------------- 275 (397)
T ss_pred chhhhhcCCCCCEE--EeehhhhC-CcceeEEEEcHHHHHhccCCCcC--------------------------------
Confidence 11111112368877 45785541 11278888888766544321100
Q ss_pred hhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHH
Q 006746 396 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~ 475 (632)
.| |. | |.+...+. .++|+.+.+ +.+.++.+.+.+
T Consensus 276 -----~t--~~----------~--~p~~~aaa------------------------~a~l~~~~~---~~l~~~~~~~~~ 309 (397)
T TIGR03246 276 -----TT--YG----------G--NPLACAVA------------------------GKVLDLVNT---PELLAGVKQRHD 309 (397)
T ss_pred -----CC--CC----------C--CHHHHHHH------------------------HHHHHHHhh---ccHHHHHHHHHH
Confidence 00 00 0 00011111 156666543 457788999999
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 555 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~ 555 (632)
+|++.|.++.... +.+ +. . ...|.++.+.+.+... -....+.+.+.++||.+..
T Consensus 310 ~l~~~L~~l~~~~----~~~---~~-v-rg~G~~~~i~~~~~~~--~~~~~~~~~l~~~Gv~~~~--------------- 363 (397)
T TIGR03246 310 LFVDGLEKINARY----NVF---SE-I-RGKGLLIGAVLTEAYQ--GKAKQFVNAAAEEGVIALI--------------- 363 (397)
T ss_pred HHHHHHHHHHhcC----CCe---Ee-e-ecCceEEEEEEcCchh--hHHHHHHHHHHHCCeEEee---------------
Confidence 9999998873211 222 11 0 1245666665543100 1223444445556777642
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.++||+++.+..|.+||+.+++.|.++++.
T Consensus 364 -------------------------~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 364 -------------------------AGPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred -------------------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 12358999999999999999999999998764
No 277
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.15 E-value=1.5e-08 Score=108.49 Aligned_cols=161 Identities=11% Similarity=0.085 Sum_probs=105.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCcc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRL 252 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~ 252 (632)
.+.|+.|++++|.++. ..|++|+|+++++.++... +++|+ +++.. ++ .......++..|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~-~~I~i~~Gs~e~i~~l~~~--~~~g~-v~v~~--P~--y~~y~~~~~~~g~~~~~v~~~~--- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDA-AHVLPVAGSQAAIRALPAL--LPRGR-VGIAP--LA--YSEYAPAFARHGHRVVPLDEAA--- 124 (339)
T ss_pred HHHHHHHHHHhCCCCc-ccEEECcCHHHHHHHHHHh--cCCCe-EEEcC--CC--cHHHHHHHHHCCCEEEeecccc---
Confidence 5889999999999742 2799999999999988653 46676 44322 21 2233455678899998887642
Q ss_pred ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHH---HhhCCcEEEEeccccCCCCCCCC-CCCCCCCc
Q 006746 253 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRI---AQENDWHILIDACALGPKDMDSF-GLSLVRPD 327 (632)
Q Consensus 253 ~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~---a~~~g~~vlvDaaq~~g~~m~~l-dls~~~~D 327 (632)
+. +.+. ++++.++.-+|+||..++.+ +.++ +++++.++++|-+-.--....++ .+...+-=
T Consensus 125 ----~~----~~~~------~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~v 190 (339)
T PRK06959 125 ----DT----LPAA------LTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGL 190 (339)
T ss_pred ----hh----cccc------CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCE
Confidence 11 2222 35777888899999999988 6554 45678889999863321100111 11111112
Q ss_pred EEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
+++.||-|.||.+---+|+++..++.++.+.
T Consensus 191 i~l~SfSK~~gl~GlRiGy~v~~~~li~~l~ 221 (339)
T PRK06959 191 VVLRSVGKFFGLAGVRAGFVLAAPALLAALR 221 (339)
T ss_pred EEEecChhhcCCcchheEEEecCHHHHHHHH
Confidence 7888999999963233699888777665543
No 278
>PLN02672 methionine S-methyltransferase
Probab=99.14 E-value=4.8e-08 Score=116.77 Aligned_cols=177 Identities=11% Similarity=0.118 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHcCCCCC-CccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 170 GLESAMKKRIMDFLNISEN-DYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~-ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+..+.+++.+++..|.+.+ +..|++|+++++++.++..++ .++||+|++.. .|+. ....++..|++++.+|.
T Consensus 734 dlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL-l~pGD~VLVp~PtY~~-----Y~~~a~~~Ga~vv~Vpl 807 (1082)
T PLN02672 734 DPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC-VQEGGTLCFPAGSNGT-----YVSAAKFLKANFRRIPT 807 (1082)
T ss_pred HHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCChHH-----HHHHHHHcCCEEEEEec
Confidence 3457888889998888753 237999999999999999988 68999987654 3432 23446778999999998
Q ss_pred cC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccC-CCCccccchH----HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 248 SW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHS-RMTGARYPYL----WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 248 ~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~s-n~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
+. .+..++.++|++++.+.+ .+++.+...+ |+||..++.+ |+++|+++|+++++|-+-.. +....
T Consensus 808 ~~e~gf~lD~d~Le~al~~~~-----~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s 882 (1082)
T PLN02672 808 KSSDGFKLTAKTLASTLETVK-----KPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWG 882 (1082)
T ss_pred ccccCCCCCHHHHHHHhccCC-----CCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCc
Confidence 63 245678899999886422 1345555543 9999999866 46678999999999987531 21000
Q ss_pred CCCCC----CCC---C---cEEEEccccccCCCCCceEEEEEeCC-Ccccc
Q 006746 318 SFGLS----LVR---P---DFLICSFYQIFGENPSGFGCLFVKKS-TVPIL 357 (632)
Q Consensus 318 ~ldls----~~~---~---Df~~~S~hK~~G~~P~G~G~L~Vr~~-~~~~L 357 (632)
..++. .+. . =+++.|+-|.|+.+---+|+++..++ +++.+
T Consensus 883 ~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l 933 (1082)
T PLN02672 883 GWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAF 933 (1082)
T ss_pred ccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHH
Confidence 01110 111 1 14666899988853234588887544 44433
No 279
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.13 E-value=3.3e-08 Score=109.48 Aligned_cols=340 Identities=14% Similarity=0.171 Sum_probs=193.4
Q ss_pred CCCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHH
Q 006746 106 LSNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRI 179 (632)
Q Consensus 106 ~~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~i 179 (632)
.++..|||..+. |--.+.+++++.+.+... + ++ +.. ...+...+.-+++
T Consensus 72 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l----~-------~~----------~~~----~~~~~~~~lAe~L 126 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQ----P-------LH----------SQE----LLDPLRALLAKTL 126 (442)
T ss_pred CCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhC----C-------Cc----------ccc----cCCHHHHHHHHHH
Confidence 367889996544 555677888776544321 1 00 000 0123334566667
Q ss_pred HHHcCCCCCCccEEEeCCHHHHHHHHHhh---CCCCCCC-eEE-EeccccchhhHHHHHHHH----hcC-----CEEEEE
Q 006746 180 MDFLNISENDYGMVFTANRTSAFKLLAES---YPFMSVK-NLL-TVYDYESEAVEAMIRTSE----KRG-----ARVMSA 245 (632)
Q Consensus 180 a~~l~a~~~ey~vvft~naT~al~lv~~s---l~~~~gd-~il-t~~d~~s~~v~~~~~~a~----~~G-----~~v~~v 245 (632)
++++...- ..+.|+.++|+|...+.+- +--..|+ +|+ ....||......+ .... +.+ ..+..+
T Consensus 127 ~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~l-s~t~~~~~~~~~~p~~~~~~~~ 203 (442)
T TIGR03372 127 AALTPGKL--KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGAL-SATAKPAFRKPFMPLLPGFHHV 203 (442)
T ss_pred HHhCCCCc--CEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHh-hccCCcccCCCCCCCCCCCEEe
Confidence 77654321 2689999999998876543 2111344 355 4556886433222 1110 011 112333
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--CC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--MD 317 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m~ 317 (632)
|++ |.+.+++.|.........+..|++.-+...-|...| ++ +.++|+++|+++++|-+|.+ |.. +-
T Consensus 204 p~~------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~ 277 (442)
T TIGR03372 204 AFG------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMF 277 (442)
T ss_pred CCC------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccch
Confidence 331 456777777531111235777888878888899998 88 89999999999999998853 321 10
Q ss_pred CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhh
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE 397 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e 397 (632)
........||+++ +=|-+|..-.-+|+++.+++.++.+....+ . +
T Consensus 278 a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~~~i~~~~~~~~~--~----------~--------------------- 322 (442)
T TIGR03372 278 ACEHEGVQPDILC--LAKALGGGVMPIGATIATEAVFSVLFDNPF--L----------H--------------------- 322 (442)
T ss_pred hhhhcCCCCCeee--ehhhhcCCcccceEEEecHHHHHhhhccCc--c----------c---------------------
Confidence 1111234689877 568665200017888888877654421100 0 0
Q ss_pred hhccccCCCc-cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 398 KVAATNTFSG-PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 398 ~e~gt~~f~~-~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
.+ .|.+ +++. ..++ +.|+.+++. .+.+|.+.+.++
T Consensus 323 --~~--T~~gnp~~~------------Aaa~-------------------------a~L~~i~~~---~l~~~~~~~G~~ 358 (442)
T TIGR03372 323 --TT--TFGGNPLAC------------AAAL-------------------------ATINELLEK---NLPAQAAIKGDF 358 (442)
T ss_pred --cC--CCCCCHHHH------------HHHH-------------------------HHHHHHHhc---cHHHHHHHHHHH
Confidence 00 1110 1110 1111 567777654 466788888889
Q ss_pred HHHHHHccC--CCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 477 LVNALMKLQ--HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 477 L~~~L~~l~--h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
|++.|.++. |+. ....+ .-+|.++.+.+.+.+ ....+.+.+.++||.+...
T Consensus 359 l~~~L~~l~~~~~~----~i~~v------RG~Gl~~giel~~~~----~~~~i~~~l~~~Gvl~~~~------------- 411 (442)
T TIGR03372 359 LLDGFQQLAAEYPD----LIIEA------RGKGLLMAIEFRDNE----IGYAFAKELFQQNILVAGT------------- 411 (442)
T ss_pred HHHHHHHHHHhCCC----ceEEE------ecceEEEEEEeCChH----HHHHHHHHHHHCCcEEeec-------------
Confidence 988888773 321 11222 135777877775421 1234444444578887521
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
..+..++|+++.+..|.+||+++++.+.+.|
T Consensus 412 -------------------------~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 412 -------------------------LNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred -------------------------CCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 0123589999999999999999999988753
No 280
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.13 E-value=3.1e-08 Score=108.71 Aligned_cols=332 Identities=11% Similarity=0.119 Sum_probs=189.1
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+ .|.-.+.+++++.+.+.... . . ++. + ..+...+..++++
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--------~---~------~~~-----~---~~~~~~~la~~l~ 91 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFW--------H---T------GNG-----Y---TNEPVLRLAKKLI 91 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcc--------c---c------cCc-----c---CCHHHHHHHHHHH
Confidence 5678999866 56667778877665442210 0 0 000 0 1233457788888
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CC-CCeEE-EeccccchhhHHHHHHHHhcC---------CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MS-VKNLL-TVYDYESEAVEAMIRTSEKRG---------ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~-gd~il-t~~d~~s~~v~~~~~~a~~~G---------~~v~ 243 (632)
++++. + .+.|++++++|+..+..... + .+ ..+|+ ....||......+ ....... ..+.
T Consensus 92 ~~~~~--~--~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~ 166 (406)
T PRK12381 92 DATFA--D--RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTV-SAGGQPKYSQDFAPLPPDIR 166 (406)
T ss_pred hhCCC--C--eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHH-hhcCCcccccCCCCCCCCee
Confidence 88754 2 79999999999888766421 1 12 33455 4556776333221 1111000 0112
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc----chH-HHHHHhhCCcEEEEeccccC-CCC--
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY----PYL-WMRIAQENDWHILIDACALG-PKD-- 315 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~----pl~-i~~~a~~~g~~vlvDaaq~~-g~~-- 315 (632)
.++. .|.+++++.|.++ +++|++.-+....|... .++ +.++|+++|+++++|-++.. |..
T Consensus 167 ~~~~------~d~~~l~~~l~~~------~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~ 234 (406)
T PRK12381 167 HAAY------NDLNSASALIDDQ------TCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE 234 (406)
T ss_pred EeCC------CCHHHHHHhccCC------eeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc
Confidence 2221 2578888888643 47777776655556443 355 77899999999999998742 221
Q ss_pred CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhh
Q 006746 316 MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 316 m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
+.........||++ ++=|.+|. -.=+|++..+++.++.+.+...+.+ |
T Consensus 235 ~~~~~~~~v~pDi~--t~sK~l~g-G~~ig~~~~~~~~~~~~~~~~~~~t----------~------------------- 282 (406)
T PRK12381 235 LYAYMHYGVTPDVL--TTAKALGG-GFPIGAMLTTEKCASVMTVGTHGTT----------Y------------------- 282 (406)
T ss_pred hhhhHhhCCCCCEE--EehhhhhC-CCceEEEEEcHHHHhhcCCCCCCCC----------C-------------------
Confidence 11111223468875 55696651 1127888888777655533111100 0
Q ss_pred hhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHH
Q 006746 396 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~ 475 (632)
.+ .++ ...+. .++|+++.+ +.+.++.+.+.+
T Consensus 283 ----~~-----~pl-------------~~aaa------------------------~a~l~~l~~---~~~~~~~~~~~~ 313 (406)
T PRK12381 283 ----GG-----NPL-------------ASAVA------------------------GKVLELINT---PEMLNGVKQRHD 313 (406)
T ss_pred ----CC-----CHH-------------HHHHH------------------------HHHHHHHhh---ccHHHHHHHHHH
Confidence 00 000 01111 155666543 356788889999
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 555 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~ 555 (632)
+|.+.|.++... .+.+ +. ....|.++.+.+.+... -....+.+.+.++||.+...
T Consensus 314 ~l~~~L~~l~~~----~~~~---~~--vrg~Gl~~~~~l~~~~~--~~~~~~~~~l~~~Gv~v~~~-------------- 368 (406)
T PRK12381 314 WFVERLNTINAR----YGLF---SE--IRGLGLLIGCVLNAEYA--GKAKQISQEAAKAGVMVLIA-------------- 368 (406)
T ss_pred HHHHHHHHHHhh----CCCE---EE--EecCeEEEEEEecCchh--hHHHHHHHHHHHCCcEEeeC--------------
Confidence 999999887311 1222 11 01245566666543110 02244555666788887421
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+...||+++.+..|.+||+++++.|+++++.
T Consensus 369 --------------------------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 369 --------------------------GPNVVRFAPALNISEEEITTGLDRFARACER 399 (406)
T ss_pred --------------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 2258999999999999999999999998864
No 281
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.11 E-value=2.3e-08 Score=109.76 Aligned_cols=162 Identities=15% Similarity=0.130 Sum_probs=105.6
Q ss_pred HHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCE-----
Q 006746 174 AMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGAR----- 241 (632)
Q Consensus 174 ~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~----- 241 (632)
+.|+.|++++ +++++ .|++|+|+++|+.++.. + +.+||+|++. -.|+. ....++..|++
T Consensus 80 ~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~l~~-~-~~~gd~V~v~~P~Y~~-----~~~~~~~~g~~~~~~~ 150 (409)
T PRK07590 80 FLREKIAENDYQARGCDISAD--EIFISDGAKCDTGNILD-I-FGPDNTIAVTDPVYPV-----YVDTNVMAGRTGEANE 150 (409)
T ss_pred HHHHHHHHHHHHhcCCcCChh--hEEECCCHHHHHHHHHH-h-cCCCCEEEEeCCCCcc-----hHHHHHHcCCcccccc
Confidence 6788888875 56765 79999999999999764 4 4789997654 34442 23345667876
Q ss_pred ------EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc
Q 006746 242 ------VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL 311 (632)
Q Consensus 242 ------v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~ 311 (632)
++.++++. ++....+ + .. .+++++.++..+|+||..++.+ |+++|+++|+++++|-+..
T Consensus 151 ~~~~~~~~~v~~~~-~~~~~~d-~----~~-----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~ 219 (409)
T PRK07590 151 DGRYSGIVYLPCTA-ENNFVPE-L----PE-----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE 219 (409)
T ss_pred cccccceeEeeccc-ccCCccc-C----cc-----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch
Confidence 78888752 2112111 1 11 2458888888899999999976 4567889999999998632
Q ss_pred --CCCCCCCCCCCCC----CCcEEEEccccccCCCCCceEEEEEeCCCcc
Q 006746 312 --GPKDMDSFGLSLV----RPDFLICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 312 --~g~~m~~ldls~~----~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
......+..+... +.-+++.||-|.||.+-.-+|+++..++.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~ 269 (409)
T PRK07590 220 AFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKG 269 (409)
T ss_pred hhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhh
Confidence 1110001112111 1136788999999863334688887766654
No 282
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.10 E-value=6.5e-08 Score=107.76 Aligned_cols=341 Identities=15% Similarity=0.166 Sum_probs=196.3
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..+. |--.+.+++++.+.+... + .+ +.. ...+...+.-++++
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l----~-------~~----------~~~----~~~~~~~~lae~L~ 134 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQ----P-------LH----------SQE----LLDPLRAMLAKTLA 134 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhC----c-------cc----------ccc----cCCHHHHHHHHHHH
Confidence 57889997544 555677888876644321 1 00 000 01233445666777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhh---CCCCCCC-eEE-EeccccchhhHHHHHHHHhcCCE---------EEEEe
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAES---YPFMSVK-NLL-TVYDYESEAVEAMIRTSEKRGAR---------VMSAE 246 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~s---l~~~~gd-~il-t~~d~~s~~v~~~~~~a~~~G~~---------v~~v~ 246 (632)
+++.... ..+.|++++|+|...+.+- +.-++|+ +|+ +...||......+ ...-....+ +..+|
T Consensus 135 ~~~p~~~--~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK11522 135 ALTPGKL--KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGAL-SATAKSTFRKPFMPLLPGFRHVP 211 (459)
T ss_pred HhCCCCC--CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHh-hhcCCcccccCCCCCCCCCcccC
Confidence 7754322 2699999999998876653 3112233 355 4457776333222 111000000 11111
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--CCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--MDS 318 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m~~ 318 (632)
. -+.+++++.|.........+..|++.-+....|...| ++ +.++|+++|+++++|-+|.+ |.. +-.
T Consensus 212 ~------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a 285 (459)
T PRK11522 212 F------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFA 285 (459)
T ss_pred C------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhh
Confidence 1 1567888877642111235677888888888999998 88 88999999999999998853 210 101
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhh
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 398 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~ 398 (632)
.......||++++ =|.+|..-.-+|+++++++.++.+....+ ..
T Consensus 286 ~e~~gv~PDivt~--gK~lggG~~Pigav~~~~~i~~~~~~~~~-------------~~--------------------- 329 (459)
T PRK11522 286 CEHENVQPDILCL--AKALGGGVMPIGATIATEEVFSVLFDNPF-------------LH--------------------- 329 (459)
T ss_pred hhccCCCCCEEEe--chhhhCCCccceeEEEcHHHHHHhccCCc-------------cc---------------------
Confidence 1112236898744 68666200017999998876543321000 00
Q ss_pred hccccCCCc-cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHH
Q 006746 399 VAATNTFSG-PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWL 477 (632)
Q Consensus 399 e~gt~~f~~-~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L 477 (632)
.+ .|.+ +++. ..+ .+.|+.+.+ +.+.+|++.+.++|
T Consensus 330 -~~--T~~gnp~~~------------Aaa-------------------------la~L~~i~~---~~l~~~~~~~g~~l 366 (459)
T PRK11522 330 -TT--TFGGNPLAC------------AAA-------------------------LATINVLLE---QNLPAQAEQKGDYL 366 (459)
T ss_pred -CC--CCCCCHHHH------------HHH-------------------------HHHHHHHhc---chHHHHHHHHHHHH
Confidence 00 1100 1110 111 156776654 34678999999999
Q ss_pred HHHHHccC--CCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh
Q 006746 478 VNALMKLQ--HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 555 (632)
Q Consensus 478 ~~~L~~l~--h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~ 555 (632)
.+.|.++. |+. ....|- -+|.++.+.+.+.+ . ...+.+.+.++||.+...
T Consensus 367 ~~~L~~l~~~~~~----~i~~Vr------G~Gl~~giel~~~~---~-~~~i~~~l~~~Gvl~~~~-------------- 418 (459)
T PRK11522 367 LDGFRQLAREYPD----LVQEAR------GKGMLMAIEFVDNE---I-GYNFASEMFRQRVLVAGT-------------- 418 (459)
T ss_pred HHHHHHHHHhCCC----ceeeEE------eceeEEEEEecCch---H-HHHHHHHHHHCCeEEEec--------------
Confidence 99999883 321 011222 25778888776521 1 233444444578887521
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+..++|+++.+..|.+||+++++.+.+.|+.
T Consensus 419 ------------------------~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 419 ------------------------LNNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred ------------------------CCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 012359999999999999999999999988764
No 283
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.09 E-value=9.4e-08 Score=104.59 Aligned_cols=351 Identities=13% Similarity=0.127 Sum_probs=208.7
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+ .|--.+.+++++.+.+.... ..+....+ .+.+.+.-+++.
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~--------------------h~~~~~~~----~e~~v~~ae~L~ 109 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN--------------------HTHTRDLY----YEPYVELAEKLT 109 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhh--------------------cccCCccc----chhHHHHHHHHH
Confidence 6789999887 45667888888766443211 11112111 133445566666
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCe-EE-EeccccchhhHHHHHHH----HhcC-----CEEEEEeccC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKN-LL-TVYDYESEAVEAMIRTS----EKRG-----ARVMSAEFSW 249 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~-il-t~~d~~s~~v~~~~~~a----~~~G-----~~v~~v~~~~ 249 (632)
+++-.+ ....+.|++++|+|...+++--....|.. |+ +...||......|.-.. ++.| ..|..+|...
T Consensus 110 ~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~ 188 (447)
T COG0160 110 ALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPN 188 (447)
T ss_pred HhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCc
Confidence 666554 22369999999999999876654444544 55 56678864444332111 1111 2366666532
Q ss_pred Ccc-----------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HH----HHHhhCCcEEEEeccccC-
Q 006746 250 PRL-----------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WM----RIAQENDWHILIDACALG- 312 (632)
Q Consensus 250 ~~~-----------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~----~~a~~~g~~vlvDaaq~~- 312 (632)
+.. .-..+.+++.|.+.......+..+++--+....|...|-+ +. ++|+++|+++|+|-+|.+
T Consensus 189 ~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~ 268 (447)
T COG0160 189 PYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGF 268 (447)
T ss_pred cccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 111 1123445555554332344678888888999999998765 54 578899999999999987
Q ss_pred ---CCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 313 ---PKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 313 ---g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
|+ |-.+.-....||++++| |-+|. -.-+|+++.|++.+. +.+...+|+ |
T Consensus 269 GRTG~-~fa~E~~gv~PDivt~a--K~ig~-G~Pl~avv~r~ei~~-~~~g~~~~T----------f------------- 320 (447)
T COG0160 269 GRTGK-MFAFEHFGVEPDIVTLA--KSLGG-GLPLSAVVGRAEIMD-WPPGGHGGT----------F------------- 320 (447)
T ss_pred Ccccc-chhhhhcCCCCCEEEec--ccccC-CCceeEEeccHHhcc-cCCcccCCC----------C-------------
Confidence 32 22333333379998876 74442 223788898988765 433221111 1
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 469 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r 469 (632)
.|- +++ ...++ +.||.+.+ +++.+|
T Consensus 321 ----------~GN-----pva------------~Aaa~-------------------------AvL~vie~---e~L~~~ 345 (447)
T COG0160 321 ----------GGN-----PVA------------CAAAL-------------------------AVLDVIEE---ENLLER 345 (447)
T ss_pred ----------CcC-----HHH------------HHHHH-------------------------HHHHHHHH---ccHHHH
Confidence 000 000 01111 44554443 478899
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc-cCHH---HHHHHHHhCCcEEccCccCC
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-IEPV---LVQKLADRENISLSYGSLHH 545 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~-i~~~---~V~kla~~~gI~lr~G~~c~ 545 (632)
...+.++|+++|.+|+-.. | +.|+- .-+|-.+..-+.+..++. -+++ .|+..+.++|+.+.+
T Consensus 346 a~~~G~~l~~~L~~l~~~~----~---~IgdV--RG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~----- 411 (447)
T COG0160 346 AAELGEYLRDRLEELQEKH----P---LIGDV--RGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLT----- 411 (447)
T ss_pred HHHHHHHHHHHHHHHHhhc----C---ceecc--cccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEec-----
Confidence 9999999999999885322 3 23442 234566666655432221 1333 344455567876532
Q ss_pred hHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 546 IWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 546 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|+ ....+||+.+-+--+.|++|.+++.|.+.|..
T Consensus 412 --------------------~G-------------~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 412 --------------------CG-------------PHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred --------------------cC-------------CCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 11 12469999999999999999999999987653
No 284
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.08 E-value=4e-08 Score=107.70 Aligned_cols=164 Identities=11% Similarity=0.106 Sum_probs=111.3
Q ss_pred HHHHHHHHHcC------CCCCCccEE--EeCCHHHHHHHHHh---hCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCE
Q 006746 174 AMKKRIMDFLN------ISENDYGMV--FTANRTSAFKLLAE---SYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 174 ~~R~~ia~~l~------a~~~ey~vv--ft~naT~al~lv~~---sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~ 241 (632)
+.|+.|++++. ++++ +|+ .|.++++|+.++.. .+ .++||+|++.. .|+ .....++..|++
T Consensus 76 ~lR~aia~~~~~~~~~~~~~~--~v~~~~t~G~~~al~~~~~~l~~~-~~~Gd~Vlv~~P~y~-----~~~~~~~~~G~~ 147 (404)
T PTZ00376 76 SFIEAAQKLLFGEASYALAEK--RIATVQALSGTGALRLGFEFLKRF-LPAGTTVYVSNPTWP-----NHVNIFKSAGLN 147 (404)
T ss_pred HHHHHHHHHhcCCCccccccC--eEEEeeccCcchHHHHHHHHHHHh-cCCCCEEEEcCCCch-----hHHHHHHHcCCc
Confidence 67888888652 2444 576 48899999998875 44 58999977543 444 224456788999
Q ss_pred EEEEeccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEecccc--CCC
Q 006746 242 VMSAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACAL--GPK 314 (632)
Q Consensus 242 v~~v~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq~--~g~ 314 (632)
++.++... .+..++.+.+++.+...+ +++++++++..+|+||..++.+ + +++|+++|+++++|-+-. ...
T Consensus 148 ~~~v~l~~~~~~~~d~~~l~~~~~~~~---~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~ 224 (404)
T PTZ00376 148 VKEYRYYDPKTKGLDFDGMLEDLRTAP---NGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASG 224 (404)
T ss_pred eeeccccCcccCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCC
Confidence 99999832 346789999999886421 2347888999999999999876 4 667889999999998632 110
Q ss_pred C----CCC-CCCCCCC-CcEEEEccccccCCCCCceEEEE
Q 006746 315 D----MDS-FGLSLVR-PDFLICSFYQIFGENPSGFGCLF 348 (632)
Q Consensus 315 ~----m~~-ldls~~~-~Df~~~S~hK~~G~~P~G~G~L~ 348 (632)
. -.+ ..+.... -=+++.||-|.||.+---+|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~ 264 (404)
T PTZ00376 225 DLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALH 264 (404)
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEE
Confidence 0 000 1111111 12788999999995323467774
No 285
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.05 E-value=2.3e-09 Score=114.04 Aligned_cols=215 Identities=13% Similarity=0.118 Sum_probs=147.0
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
.+.|-.-+-|-++++...++++...++.. .|+ . +...+....++.+.....+.++.
T Consensus 26 ~G~v~~t~lG~s~~~~e~iea~~~~~~~~--------------------v~L-e---~~l~~g~~~~R~~~~~~~~~~~~ 81 (395)
T COG1921 26 IGTVLMTNLGRSLYSPEAIEAMKEAMRAP--------------------VEL-E---TDLKTGKRGARLTELAELLCGLT 81 (395)
T ss_pred hhhheeccCCCccCCHHHHHHHHHHhccc--------------------cee-e---eecccchhhHHHHHHHHHHhccc
Confidence 45566777888999999999876644321 122 0 11122344445554455555555
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccch-hhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESE-AVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~-~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
.. +.++.++|.+.|+-++..++. ++.+++..+.|.-+ ....+-+..+.-|++++.+.- ..+.+..+++.+|.+
T Consensus 82 ~a-ea~~ivnnn~aAVll~~~al~--~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~---tn~t~~~d~~~AIne 155 (395)
T COG1921 82 GA-EAAAIVNNNAAAVLLTLNALA--EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT---TNRTHLKDYELAINE 155 (395)
T ss_pred ch-hheeeECCcHHHHHHHHhhhc--cCCeEEEEccccccCCCCChhHHHHHcCCEEEEecc---cCcCCHHHHHHHhcc
Confidence 33 267788999999998888873 35565544432221 222344556677999887753 345788999999998
Q ss_pred cCcCCCceeEEEEeccCCCCccc--cchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC---CCCCcEEEEccccccCC
Q 006746 266 KGKKKKQRGLFVFPLHSRMTGAR--YPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS---LVRPDFLICSFYQIFGE 339 (632)
Q Consensus 266 ~~~~~~~~~Lv~~~~~sn~TG~~--~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls---~~~~Df~~~S~hK~~G~ 339 (632)
++ .+....|.+|. |.. .+.+ ++++||++|+++++|+++....+ ..-++. +.++|.+++|++|+||.
T Consensus 156 ~t------a~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaDLV~~SgdKllgG 227 (395)
T COG1921 156 NT------ALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGADLVSFSGDKLLGG 227 (395)
T ss_pred CC------eeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCCEEEEecchhcCC
Confidence 76 67777777765 554 6788 99999999999999999866532 123333 35899999999999886
Q ss_pred CCCceEEEEEeCCCccccCCCC
Q 006746 340 NPSGFGCLFVKKSTVPILVDNT 361 (632)
Q Consensus 340 ~P~G~G~L~Vr~~~~~~L~~~~ 361 (632)
|+ .|++.-||+.+++++...
T Consensus 228 -Pq-aGii~GkKelI~~lq~~~ 247 (395)
T COG1921 228 -PQ-AGIIVGKKELIEKLQSHP 247 (395)
T ss_pred -Cc-cceEechHHHHHHHHhhh
Confidence 76 899999999998887653
No 286
>PRK08354 putative aminotransferase; Provisional
Probab=99.05 E-value=1.5e-07 Score=99.41 Aligned_cols=148 Identities=16% Similarity=0.201 Sum_probs=104.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
...|+.+++++|. +|++|+|+++|+.+++..+ .+||+|++.. .|. .....++..|+++..++
T Consensus 43 ~~l~~~ia~~~~~-----~I~vt~G~~~al~~~~~~~--~~gd~vlv~~P~y~-----~~~~~~~~~g~~~~~~~----- 105 (311)
T PRK08354 43 EWLEEEFSKLFGE-----PIVITAGITEALYLIGILA--LRDRKVIIPRHTYG-----EYERVARFFAARIIKGP----- 105 (311)
T ss_pred HHHHHHHHHHHCC-----CEEECCCHHHHHHHHHHhh--CCCCeEEEeCCCcH-----HHHHHHHHcCCEEeecC-----
Confidence 4678999999983 5999999999999988654 4799977543 333 33556778899986553
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEeccccC-CCCCCCCCCCCCCC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACALG-PKDMDSFGLSLVRP 326 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq~~-g~~m~~ldls~~~~ 326 (632)
++++.+++.+.+ +++++++..+|+||..++.+ + ++.|+++|+++++|-+-.- ..+-..++ ..-
T Consensus 106 --~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~---~~~ 173 (311)
T PRK08354 106 --NDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPE---GEN 173 (311)
T ss_pred --CCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccC---CCc
Confidence 467788777652 25777888889999999866 4 5667889999999997422 11101111 233
Q ss_pred cEEEEccccccCCCCCceEEEEE
Q 006746 327 DFLICSFYQIFGENPSGFGCLFV 349 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~V 349 (632)
-+++.|+-|.||.+---+|+++.
T Consensus 174 vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 174 IIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred EEEEeccHhhcCCccceeeeeee
Confidence 58889999999963223588776
No 287
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.04 E-value=4.8e-08 Score=106.72 Aligned_cols=166 Identities=14% Similarity=0.113 Sum_probs=112.4
Q ss_pred HHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
+.|+.|++++. +++++..|+.|+|+++|+.+++..+. ..+||+|++.. .|+. ....++..|++++.+
T Consensus 73 ~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~-----~~~~~~~~g~~~v~v 147 (396)
T PRK09257 73 AYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPN-----HRAIFEAAGLEVKTY 147 (396)
T ss_pred HHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCccc-----HHHHHHHcCCcEEEE
Confidence 67777777752 23442224999999999999987764 47899987643 4442 234566789999999
Q ss_pred ec-cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc-CCCC----
Q 006746 246 EF-SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL-GPKD---- 315 (632)
Q Consensus 246 ~~-~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~-~g~~---- 315 (632)
+. +..+..++.+++++.+.... .+..+++++..+|+||..++.+ |+++|+++|++++.|-+-. ...+
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~~---~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~ 224 (396)
T PRK09257 148 PYYDAATKGLDFDAMLADLSQAP---AGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEED 224 (396)
T ss_pred eccccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHH
Confidence 87 32345689999998887421 2247888899999999999876 4667889999999998632 1110
Q ss_pred CCCC-CCCCC-CCcEEEEccccccCCCCCce--EEEEE
Q 006746 316 MDSF-GLSLV-RPDFLICSFYQIFGENPSGF--GCLFV 349 (632)
Q Consensus 316 m~~l-dls~~-~~Df~~~S~hK~~G~~P~G~--G~L~V 349 (632)
..++ .+... .-=+++.||-|.|| |+|+ |++++
T Consensus 225 ~~~~~~~~~~~~~vi~i~SfSK~~~--~~GlRiG~~~~ 260 (396)
T PRK09257 225 AYGLRAFAAAGLELLVASSFSKNFG--LYGERVGALSV 260 (396)
T ss_pred HHHHHHHHhcCCcEEEEEEcCCcCc--cccccceeEEE
Confidence 0010 01111 11377899999999 4454 77764
No 288
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.03 E-value=5.5e-08 Score=104.16 Aligned_cols=147 Identities=12% Similarity=0.144 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
.....+.++++-|+.. .++| +++..|+..+...+ ...|++|+. ..-|. ....-|.++..+.|+++..+..+
T Consensus 79 ~~~le~~iaal~ga~~---~l~f-sSGmaA~~~al~~L-~~~g~~iV~~~~~Y~-gT~~~l~~~~~~~gie~~~vd~~-- 150 (409)
T KOG0053|consen 79 RDVLESGIAALEGAAH---ALLF-SSGMAAITVALLHL-LPAGDHIVATGDVYG-GTLRILRKFLPKFGGEGDFVDVD-- 150 (409)
T ss_pred hHHHHHHHHHHhCCce---EEEe-cccHHHHHHHHHHh-cCCCCcEEEeCCCcc-cHHHHHHHHHHHhCceeeeechh--
Confidence 3456778899999862 3444 56666666666666 477899764 44444 35667788889999999888664
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEE
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFL 329 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~ 329 (632)
+.+++++.+.++ +++|.+-..+|++....||+ +.++||++|+.|+||.+=..|....+|.+ ++|.+
T Consensus 151 ----~~~~~~~~i~~~------t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~l---GADIV 217 (409)
T KOG0053|consen 151 ----DLKKILKAIKEN------TKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPL---GADIV 217 (409)
T ss_pred ----hHHHHHHhhccC------ceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhc---CCCEE
Confidence 567888888764 59999999999999999999 99999999999999998666643345554 78999
Q ss_pred EEccccccCC
Q 006746 330 ICSFYQIFGE 339 (632)
Q Consensus 330 ~~S~hK~~G~ 339 (632)
+-|.-|++|.
T Consensus 218 ~hSaTKyi~G 227 (409)
T KOG0053|consen 218 VHSATKYIGG 227 (409)
T ss_pred EEeeeeeecC
Confidence 9999998884
No 289
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.03 E-value=2.9e-07 Score=102.20 Aligned_cols=349 Identities=11% Similarity=0.099 Sum_probs=191.8
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..++ |--.+.+.+++.+.+..... .. .. +. ..+...+.-+++.
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~------~~-----------~~-----~~--~~~~~~~la~~L~ 94 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH------YT-----------PI-----YG--FPVEPLLLAEKLI 94 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccC------cc-----------cc-----cc--CcHHHHHHHHHHH
Confidence 67889997554 55567777776654432100 00 00 00 1122335555677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEE-eccccchhhHHHHHHH----Hhc--C--CEEEEEeccCC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLT-VYDYESEAVEAMIRTS----EKR--G--ARVMSAEFSWP 250 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt-~~d~~s~~v~~~~~~a----~~~--G--~~v~~v~~~~~ 250 (632)
+.+...- ..|.|+.++|+|...+++--. +....+|++ ...||......+.-.. .+. | ..+..+|....
T Consensus 95 ~~~p~~~--~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (443)
T PRK08360 95 EIAPGDN--PKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDC 172 (443)
T ss_pred HhCCCCC--CEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCcc
Confidence 7765431 269999999999887654321 222334654 4467763322221000 000 1 12344443210
Q ss_pred c----cc-------cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-C
Q 006746 251 R----LR-------INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-P 313 (632)
Q Consensus 251 ~----~~-------i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g 313 (632)
. .. -+.+.+++.|.... ...++..|.+.-+.+.+|...| ++ +.++|+++|+++++|-++.. |
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 251 (443)
T PRK08360 173 YRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLG 251 (443)
T ss_pred ccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 0 00 12344555664311 1235777777778899999887 66 78899999999999998763 3
Q ss_pred CC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 314 KD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 314 ~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
.. +.........||+++ +=|.+|. .--+|++..+++.++.+.....+.+ +
T Consensus 252 r~G~~~a~~~~~~~pDiit--lsK~l~~-G~pigav~~~~~i~~~~~~~~~~~T----------~--------------- 303 (443)
T PRK08360 252 RTGKWFAIEHFGVEPDIIT--LGKPLGG-GLPISATIGRAEIMDSLPPLAHAFT----------L--------------- 303 (443)
T ss_pred cCccchhhhhcCCCCCEEE--ecccccC-CceeEEEEEcHHHHhhhcCCCCCCC----------C---------------
Confidence 21 111111234689775 4797772 1127898888777665532111000 0
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGR 471 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~ 471 (632)
.+. ++ ....+ .++|+.+.+. .+.+|++
T Consensus 304 --------~~~-----p~------------~~aaa-------------------------~a~l~~l~~~---~l~~~~~ 330 (443)
T PRK08360 304 --------SGN-----PV------------ASAAA-------------------------LAVIEEIEEK---NLLKRAE 330 (443)
T ss_pred --------CcC-----HH------------HHHHH-------------------------HHHHHHHHHc---CHHHHHH
Confidence 000 00 00111 1566666543 4678888
Q ss_pred HHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc-cCH---HHHHHHHHhCCcEEccCccCChH
Q 006746 472 CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-IEP---VLVQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 472 ~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~-i~~---~~V~kla~~~gI~lr~G~~c~~~ 547 (632)
.+..+|++.|.++.... |.+ +. . ..+|-++.+.+.+..... -+. ..+.+.+.++||.++.
T Consensus 331 ~~g~~l~~~L~~l~~~~----~~v---~~-v-rg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~------- 394 (443)
T PRK08360 331 KLGNYTKKRLEEMKKKH----ELI---GD-V-RGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTF------- 394 (443)
T ss_pred HHHHHHHHHHHHHHHhC----CCe---ee-e-eccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEee-------
Confidence 99999999888773211 322 11 1 235667777665321111 011 2344444557777641
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+..++|+++.+..|.+||+.+++.+.+.|+.
T Consensus 395 ---------------------------------~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 395 ---------------------------------FSGNVLRIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred ---------------------------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 02258999999999999999999999998865
No 290
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.03 E-value=2.4e-08 Score=109.07 Aligned_cols=172 Identities=13% Similarity=0.084 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc---
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS--- 248 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~--- 248 (632)
+.+..+++++++|.+ .+++|+|+|.|++++. .+.+++||+| .+..|.. .... ..+..|+.+.-++.+
T Consensus 73 ~~~lE~~va~~~G~~----~av~v~sGT~Al~ll~-~l~l~pGDeV-psn~~f~-Tt~a---hIe~~Gav~vDi~~dea~ 142 (450)
T TIGR02618 73 FYHLERTVRELYGFK----YVVPTHQGRGAENLLS-QIAIKPGDYV-PGNMYFT-TTRY---HQEKNGATFVDIIIDEAH 142 (450)
T ss_pred HHHHHHHHHHHHCCC----eEEEcCCHHHHHHHHH-HhCCCCcCEE-CCceeHH-HHHH---HHHhCCeEEEeeeccccc
Confidence 347888999999986 4899999999999875 5558999987 4444433 1211 125578766555432
Q ss_pred ------CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-ccccc---hH-HHHHHhhCCcEEEEeccccCCCCC-
Q 006746 249 ------WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYP---YL-WMRIAQENDWHILIDACALGPKDM- 316 (632)
Q Consensus 249 ------~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~m- 316 (632)
..++.+|+++|+++|+++. ..++.++++....|.. |...| ++ +.++|+++|+.+++|+|++++...
T Consensus 143 ~~~~~~p~~GniD~~~Le~aI~~~~--~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~ 220 (450)
T TIGR02618 143 DAQLNIPFKGNVDLKKLQKLIDEVG--ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYF 220 (450)
T ss_pred ccccCCCCCCCcCHHHHHHHhcccc--CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhh
Confidence 2357899999999998642 2244577777767765 78765 56 788999999999999999885310
Q ss_pred ------CCCCCCC--------CCCcEEEEccccccCCCCCceEEEEEeC-CCcccc
Q 006746 317 ------DSFGLSL--------VRPDFLICSFYQIFGENPSGFGCLFVKK-STVPIL 357 (632)
Q Consensus 317 ------~~ldls~--------~~~Df~~~S~hK~~G~~P~G~G~L~Vr~-~~~~~L 357 (632)
.-.|.+. ...|.+.+|+||-++. |.| |+|..++ ++.+++
T Consensus 221 I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~-~~G-G~l~~~d~~l~~k~ 274 (450)
T TIGR02618 221 IKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLV-NIG-GFLCMNDDEMFQSA 274 (450)
T ss_pred hhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCC-CCc-eEEEeCCHHHHHHH
Confidence 0112111 1479999999997776 642 3333354 333433
No 291
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.01 E-value=3.1e-07 Score=101.94 Aligned_cols=306 Identities=11% Similarity=0.155 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHHH-----HhcC----
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRTS-----EKRG---- 239 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~a-----~~~G---- 239 (632)
...+.-++|.+.+..+. ...|.|+.++|+|...+.+.-..-.|+ +|++ ...||......|. .. .+.+
T Consensus 98 ~~~~lAe~L~~~~p~~~-~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls-~t~~~~~~~~~~~~~ 175 (441)
T PRK05769 98 PAVELAERLVEIAPGGF-EKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLS-LTASKPVQRKGFFPL 175 (441)
T ss_pred HHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHH-hcCCCcccccCCCCC
Confidence 33466667777664221 137999999999998766532222344 4664 4467763332221 11 0000
Q ss_pred -CEEEEEeccCCccc-------------cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhC
Q 006746 240 -ARVMSAEFSWPRLR-------------INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQEN 300 (632)
Q Consensus 240 -~~v~~v~~~~~~~~-------------i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~ 300 (632)
..+..++... ... -+.+.+++.+.+.......+..|++-.+....|...| ++ +.++|+++
T Consensus 176 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~ 254 (441)
T PRK05769 176 MPGVIHVPYPN-PYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY 254 (441)
T ss_pred CCCeEEeCCCc-cccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 1233343310 000 0123355523221001235788888888888999999 88 99999999
Q ss_pred CcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccccccc
Q 006746 301 DWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWL 377 (632)
Q Consensus 301 g~~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~ 377 (632)
|+++++|-++.+ |.. +.....-...||++++| |.+|. ...+|++..+++.+..+ +...+++ |
T Consensus 255 g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~--K~l~~-G~p~gav~~~~~i~~~~-~~~~~~T----------~- 319 (441)
T PRK05769 255 GILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLA--KAIAG-GLPLGAVIGRAELMFLP-PGSHANT----------F- 319 (441)
T ss_pred CCEEEEechhhCCCcccceehhhccCCCCCEEEEc--ccccC-CcccEEEEEehhhhhcC-CCCCCCC----------C-
Confidence 999999998763 321 10111112368998765 85552 22378888888775322 1110000 0
Q ss_pred ccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHH
Q 006746 378 TDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ 457 (632)
Q Consensus 378 ~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~ 457 (632)
.| .+++ ...+ .++|+.
T Consensus 320 ----------------------~g-----~p~~------------~aaa-------------------------~a~L~~ 335 (441)
T PRK05769 320 ----------------------GG-----NPVA------------AAAA-------------------------LATLEE 335 (441)
T ss_pred ----------------------Cc-----CHHH------------HHHH-------------------------HHHHHH
Confidence 00 0000 0111 156776
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCH---HHHHHHHHhC
Q 006746 458 VDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEP---VLVQKLADRE 534 (632)
Q Consensus 458 ~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~---~~V~kla~~~ 534 (632)
+.+ .+.++++.+.++|++.|.++... .|.+ +. -.-+|.++.+.+.+...+. +. ..+.+.+-++
T Consensus 336 l~~----~~~~~~~~~g~~l~~~L~~l~~~----~~~~---~~--vrg~G~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~ 401 (441)
T PRK05769 336 LEE----GLLENAQKLGEYLRKELKELKEK----YEFI---GD--VRGLGLMIGVELVKDRKEP-DPKLRDKVLYEAFKR 401 (441)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHHh----CCCe---ee--eecceEEEEEEeccCCccc-cHHHHHHHHHHHHhC
Confidence 654 56788999999999999887311 1322 11 1235677777664421111 11 2233344456
Q ss_pred CcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 535 NISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 535 gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
||.+.. .+..++|+++.+..|.+||+++++.+.+.|+.
T Consensus 402 Gil~~~----------------------------------------~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 402 GLLLLG----------------------------------------AGKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred CcEEec----------------------------------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 777631 12358999999999999999999999988753
No 292
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.98 E-value=3.1e-08 Score=108.59 Aligned_cols=166 Identities=11% Similarity=0.061 Sum_probs=113.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEec-----
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEF----- 247 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~----- 247 (632)
.+..+.+++++|.+ .+++|+|+|.|++++ ..+..++||+| ....|... ... . ....|+...-+..
T Consensus 81 ~~LE~~vAe~lG~e----~aV~v~sGTaAl~ll-~~l~v~pGd~V-p~n~~f~T-t~a--h-I~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 81 YHLEETVQEYYGFK----HVVPTHQGRGAENLL-SRIAIKPGQYV-PGNMYFTT-TRY--H-QELNGGIFVDIIIDEAHD 150 (460)
T ss_pred HHHHHHHHHHHCCC----eEEEeCCHHHHHHHH-HHhCCCCcCEE-CCccchHh-hHH--H-HHhCCcEEEeeecccccc
Confidence 47788999999986 489999999999986 44557899975 44445431 111 1 2456775444421
Q ss_pred ----cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-cccc---chH-HHHHHhhCCcEEEEeccccCCCCC-C
Q 006746 248 ----SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARY---PYL-WMRIAQENDWHILIDACALGPKDM-D 317 (632)
Q Consensus 248 ----~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~---pl~-i~~~a~~~g~~vlvDaaq~~g~~m-~ 317 (632)
++.++.+|+++|+++|++++ ..+++|+++....|.. |... +++ +.++|+++|+.|++|||++++... +
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI 228 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFI 228 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhh
Confidence 13467899999999998643 2456677777767777 5665 457 889999999999999999887210 0
Q ss_pred ------CCCCCC--------CCCcEEEEccccccCCCCCceEEEEEeCC
Q 006746 318 ------SFGLSL--------VRPDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 318 ------~ldls~--------~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
--+-+. ...|.+++|+||-++. |. =|++..+++
T Consensus 229 ~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~-~~-GG~i~t~D~ 275 (460)
T PRK13237 229 KEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLV-NI-GGFLAMNDE 275 (460)
T ss_pred cccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCC-CC-ceEEEECCH
Confidence 011110 2469999999996664 43 255556554
No 293
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.98 E-value=4.3e-07 Score=100.95 Aligned_cols=347 Identities=11% Similarity=0.075 Sum_probs=187.7
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+ .|--.+.+.+++.+.++.... .. +.....+...+.-++++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~------~~------------------~~~~~~~~~~~la~~l~ 109 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTH------TC------------------FMVTPYEGYVAVAEQLN 109 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccC------cc------------------ccccCCHHHHHHHHHHH
Confidence 6788999855 455567777776554332100 00 00001133345666677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHh---hCCCCCCCeEEE-eccccchhhHHHHHHH-----HhcCC-----EEEEEe
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAE---SYPFMSVKNLLT-VYDYESEAVEAMIRTS-----EKRGA-----RVMSAE 246 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~---sl~~~~gd~ilt-~~d~~s~~v~~~~~~a-----~~~G~-----~v~~v~ 246 (632)
+.+.... ...+.|+.++|+|...+.+ .+ ...++|++ ...||......| ... .+.+. .+..+|
T Consensus 110 ~~~p~~~-~~~v~f~~sGseA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~al-~~~~~~~~~~~~~~~~~~~~~~~~ 185 (443)
T PRK06058 110 RLTPGDH-EKRSALFNSGAEAVENAVKIARSY--TGRQAVVVFDHAYHGRTNLTM-ALTAKSMPYKSGFGPFAPEVYRAP 185 (443)
T ss_pred HhCCCCC-CCEEEEeCCcHHHHHHHHHHHHHh--hCCCeEEEECCCcCcChHHHH-hhcCCCcccccccCCCCCCceEcC
Confidence 7664221 1268999999999887665 44 33345664 456776332222 111 01111 122233
Q ss_pred ccCCccc-----cC-HHHHHH---HHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC
Q 006746 247 FSWPRLR-----IN-SEKLRK---MVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG 312 (632)
Q Consensus 247 ~~~~~~~-----i~-~~~l~~---~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~ 312 (632)
...+... .+ .+.+.+ .+.+.. ....+..|.+.-+....|...| ++ +.++|+++|+++++|-++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tG 264 (443)
T PRK06058 186 MSYPYRDPKGLATDGEEAAARAITVIEKQV-GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTG 264 (443)
T ss_pred CCcccccccccccchHHHHHHHHHHHHHhh-CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 2101000 00 011111 122110 0134677777777777788876 66 78899999999999998763
Q ss_pred -CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 313 -PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 313 -g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
|.. +-....-...||+++++ |.+|. --=+|+++.+++.++.+.+...+++ |
T Consensus 265 fgRtG~~fa~~~~gv~PDiv~~g--K~l~~-G~Pi~av~~~~~i~~~~~~~~~~~T----------~------------- 318 (443)
T PRK06058 265 FARTGAWFACEHEGIVPDLITTA--KGIAG-GLPLSAVTGRAEIMDAPHPGGLGGT----------Y------------- 318 (443)
T ss_pred CCcChhhhHHHhcCCCCCEEEEc--ccccC-CCccEEEEEcHHHHhhccCCCCCCC----------C-------------
Confidence 211 11112223478999887 95551 1117899998887665543211100 0
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 469 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r 469 (632)
. .|.....+. .+.|+.+.+ +.+.+|
T Consensus 319 ----------------~------------gnpl~~aaa------------------------~a~L~~~~~---~~l~~~ 343 (443)
T PRK06058 319 ----------------G------------GNPVACAAA------------------------LAAIETIEE---DDLVAR 343 (443)
T ss_pred ----------------C------------CCHHHHHHH------------------------HHHHHHHHH---cCHHHH
Confidence 0 000011111 156666554 356788
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC-CCccCHH---HHHHHHHhCCcEEccCccCC
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK-REKIEPV---LVQKLADRENISLSYGSLHH 545 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~-G~~i~~~---~V~kla~~~gI~lr~G~~c~ 545 (632)
.+.+.++|.++|.++.... +.+ +. -.-+|.++.+.+.+.. .+. +.+ .+.+.+.++||.+..+
T Consensus 344 ~~~~g~~l~~~L~~l~~~~----~~i---~~--vrg~G~~~~i~~~~~~~~~~-~~~~~~~l~~~~~~~Gv~~~~~---- 409 (443)
T PRK06058 344 ARQIEALMTDRLRALAAED----DRI---GD--VRGRGAMIAIELVKPGTTEP-DAELTKALAAAAHAAGVIVLTC---- 409 (443)
T ss_pred HHHHHHHHHHHHHHHHhhC----CcE---Ee--eeccceEEEEEEecCCCCCC-cHHHHHHHHHHHHHCCeEEecc----
Confidence 8888999999998873211 222 11 0235777777764421 111 222 2333334578877532
Q ss_pred hHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 546 IWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 546 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.. ...+||+.+.+..|.+||+.+++.|.++|.
T Consensus 410 ---------------------------------~~-~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~ 441 (443)
T PRK06058 410 ---------------------------------GT-YGNVIRLLPPLVIGDELLREGLDVLEAALA 441 (443)
T ss_pred ---------------------------------CC-CCCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 00 124899999999999999999999998875
No 294
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.98 E-value=3.4e-07 Score=97.49 Aligned_cols=370 Identities=14% Similarity=0.122 Sum_probs=213.2
Q ss_pred CCCchhHHHHHHhhccCcCCCCceEeecCCCCCCCH---HHHH-HHhcCCCCCCCCCCCCCCCCcccccccccccccccc
Q 006746 87 YFDTYQIDQIRAKEYYQLSLSNHTCLDYFGIGLFSY---NQLH-KQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL 162 (632)
Q Consensus 87 y~~~~~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~---~~~~-a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~ 162 (632)
..+.+.+.++|+- . .+|++|-.+.|.|.+.. +++. .+.. +|.+|- +|-.= ....
T Consensus 57 ~sE~e~l~~l~~i----a-~kN~~~~sfiG~GyY~~~~P~vI~rnile--------~pewyT-------aYTPY--QpEI 114 (450)
T COG0403 57 LSEYEALAELKEI----A-SKNKVFTSFIGAGYYDTYTPPVILRNILE--------NPEWYT-------AYTPY--QPEI 114 (450)
T ss_pred CCHHHHHHHHHHH----H-hcCchhhhhccCcccCCcCcHHHHHHhhc--------Cccccc-------cCCCC--chhh
Confidence 3444566666642 2 26778999999997763 4444 3222 132221 01000 0111
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCC--CCeEEEeccccchhhHHHHHHHHhcCC
Q 006746 163 LHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMS--VKNLLTVYDYESEAVEAMIRTSEKRGA 240 (632)
Q Consensus 163 ~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~--gd~ilt~~d~~s~~v~~~~~~a~~~G~ 240 (632)
..|. -+.+=+....|+++.|.+-.+ --.--.+|.+-+.+.-++...+ .++++++.+-|.+.+.-++..++-.|.
T Consensus 115 SQGr--LqaLfefQtlv~dLTGm~VAN--ASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~ 190 (450)
T COG0403 115 SQGR--LEALFEFQTLVADLTGLDVAN--ASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGI 190 (450)
T ss_pred hhHH--HHHHHHHHHHHHHHhCCCccc--chhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCce
Confidence 2232 244457889999999986432 2223467777777666665554 345777665555578888888888889
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCc-cccchH-HHHHHhhCCcEEEEec--cccCCCCC
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTG-ARYPYL-WMRIAQENDWHILIDA--CALGPKDM 316 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG-~~~pl~-i~~~a~~~g~~vlvDa--aq~~g~~m 316 (632)
+|..++.+ +.+++++. .+. .+--+.+.+. |..| ...++. +.+.+|+.|.+++|=+ -++.=.
T Consensus 191 ~i~~~~~~------d~~~l~~~-~~~-----~~~gv~vQyP-~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL-- 255 (450)
T COG0403 191 EIEVVDAD------DLDDLESA-DDG-----DVFGVLVQYP-NTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLL-- 255 (450)
T ss_pred EEEEeccc------hhhhhhhc-ccc-----CeEEEEEecC-CCCCccchhHHHHHHHHhhcCCEEEEEechhHhhcc--
Confidence 98887764 56677766 331 2344444444 4778 666699 9999999999888733 332211
Q ss_pred CCCCCCCCCCcEEEEccccc-----cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 317 DSFGLSLVRPDFLICSFYQI-----FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK~-----~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
-|- -+++.|+++++.+.+ ||. | ..|++-+|++...++.-...|=+++.
T Consensus 256 ~pP--Ge~GADIvvG~~QrfGvPmgfGG-P-hag~fA~~~~~~R~mPGRlVG~S~D~----------------------- 308 (450)
T COG0403 256 KPP--GEFGADIVVGSAQRFGVPMGFGG-P-HAGYFAVKDEFKRQMPGRLVGVSVDA----------------------- 308 (450)
T ss_pred CCc--cccCCceEEecCcccCCCcCCCC-c-ceeeeeEhHhHhhcCCCceeeeeecC-----------------------
Confidence 011 247889999999982 453 3 67899999987655544444411110
Q ss_pred chhhhhhhccccCCCccchhh---hhh-cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHH--HHHHhhCHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIE---MRQ-SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGL--DQVDSLGLTM 465 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~---~~~-~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aL--d~~~~~Gl~~ 465 (632)
.|.+.|.-.+..+ .|| --|.|+---++|- ...+++ -++-..|+.+
T Consensus 309 --------~G~~A~rLaLQTREQHIRReKATSNICTnQaLl---------------------A~~As~y~~~hGp~GLk~ 359 (450)
T COG0403 309 --------AGKRAFRLALQTREQHIRREKATSNICTNQALL---------------------ALAASMYAVYHGPQGLKE 359 (450)
T ss_pred --------CCCchhhhhHHHHHHHHhhhccchhhhHHHHHH---------------------HHHHHHHHHHhChHHHHH
Confidence 1222222111110 111 1345554434432 000221 2223358999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCC
Q 006746 466 ISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHH 545 (632)
Q Consensus 466 I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~ 545 (632)
|.+|+..++.+|.++|+++ + -++++.... .=-.+.+.+.. -....+.+.+...||-+|.
T Consensus 360 iA~r~~~~a~~la~~L~~~------~-~g~~~~~~~----fFdt~~v~~~~-----~~~~~l~~~~~~~G~~L~~----- 418 (450)
T COG0403 360 IAERIHRLAAYLAAGLKEI------G-AGVELVFDH----FFDTFTVRVPE-----EVAEALLAAAIAGGINLRR----- 418 (450)
T ss_pred HHHHHHHHHHHHHHHHhhc------C-CceEecccc----ceeeEEEecch-----hHHHHHHHHHHhcCCceee-----
Confidence 9999999999999999977 2 235555431 22233343331 0122333333345776652
Q ss_pred hHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 546 IWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 546 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
.....+=+|+---+|.+||+.||+.+...
T Consensus 419 -----------------------------------~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 419 -----------------------------------VDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred -----------------------------------ecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 01237778899999999999999987653
No 295
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.96 E-value=1.8e-07 Score=103.95 Aligned_cols=352 Identities=13% Similarity=0.110 Sum_probs=194.2
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..+. |--.+.+++++.+.+..... .+.+ . + ..+...+.-++++
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~--------~~~~-----------~--~---~~~~~~~la~~L~ 102 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDY--------APAF-----------Q--M---GHPLAFELAERLA 102 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccC--------cccc-----------c--c---CCHHHHHHHHHHH
Confidence 57889998544 66677788877654432100 0000 0 0 1133345666777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCC-CeEE-EeccccchhhHHHH-----HHHHhcC---CEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSV-KNLL-TVYDYESEAVEAMI-----RTSEKRG---ARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~g-d~il-t~~d~~s~~v~~~~-----~~a~~~G---~~v~~ 244 (632)
+++... -..|.|+.++|+|+..+.+--. + +++ .+|+ ....||....-.|. ...+..+ ..+..
T Consensus 103 ~~~p~~--~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~ 180 (445)
T PRK09221 103 ELAPGG--LDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDH 180 (445)
T ss_pred HhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeE
Confidence 776422 1279999999999887665321 1 122 3465 45577753322211 0000011 11333
Q ss_pred EeccC--Ccc----------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEe
Q 006746 245 AEFSW--PRL----------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILID 307 (632)
Q Consensus 245 v~~~~--~~~----------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvD 307 (632)
+|... +.. ....+++++.|.... ...+..|++--+....|.+.| ++ +.++|+++|+++++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D 258 (445)
T PRK09221 181 LPHTLDLPENAFSKGQPEHGAELADDLERLVALHD--ASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFD 258 (445)
T ss_pred eCCCccccccccCCChHHHHHHHHHHHHHHHHhcC--CCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 43320 000 001356777775321 135778888888888999999 88 999999999999999
Q ss_pred ccccC-CC--CCCCCCCCCCCCcEEEEccccccC--CCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccC
Q 006746 308 ACALG-PK--DMDSFGLSLVRPDFLICSFYQIFG--ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 308 aaq~~-g~--~m~~ldls~~~~Df~~~S~hK~~G--~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
-+|.+ |. .+...+.....||+++++ |.+| +.| +|++.++++.++.+..... .. ..++ +
T Consensus 259 EV~tG~GRtG~~~~~~~~gv~PDi~~~g--K~l~gG~~P--i~av~~~~~i~~~~~~~~~-~~-------~~~~--~--- 321 (445)
T PRK09221 259 EVITGFGRLGAAFAAERFGVTPDIITFA--KGLTNGAIP--MGAVIASDEIYDAFMQGPE-YA-------IEFF--H--- 321 (445)
T ss_pred ehhhCCCcCchhhHHHhcCCCCCEEEec--cccccCccc--ceeeEEcHHHHHhhccCcc-cc-------cccc--c---
Confidence 98753 32 111112222368977654 7443 213 7888888877655532100 00 0000 0
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
..|.. ..+++ ..+. .+.|+.+.+.
T Consensus 322 -----------------~~T~~-~~pl~-------------~aaa------------------------~a~L~~i~~~- 345 (445)
T PRK09221 322 -----------------GYTYS-AHPVA-------------CAAG------------------------LATLDIYREE- 345 (445)
T ss_pred -----------------ccCCC-cCHHH-------------HHHH------------------------HHHHHHHHhc-
Confidence 01100 01111 1111 1567777654
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc-cCHHHHHHHHHhCCcEEccC
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-IEPVLVQKLADRENISLSYG 541 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~-i~~~~V~kla~~~gI~lr~G 541 (632)
.+.+|++.+.++|++.|.++. +.|.| ++ . .-+|-++.+.+.+..+.. .....+.+.+.++||.++.+
T Consensus 346 --~l~~~~~~~g~~l~~~l~~l~-----~~~~v---~~-v-rg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~ 413 (445)
T PRK09221 346 --DLFERAAELAPYFEDAVHSLK-----GLPHV---ID-I-RNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT 413 (445)
T ss_pred --cHHHHHHHHHHHHHHHHHhhc-----cCCCE---EE-E-ecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec
Confidence 457899999999999998872 11322 11 1 124555555554321111 11234445555678877521
Q ss_pred ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 542 SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 542 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+||+++.+..|.+||+++++.|.+.|++
T Consensus 414 -----------------------------------------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 414 -----------------------------------------GDTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred -----------------------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 138999999999999999999999988753
No 296
>PRK08637 hypothetical protein; Provisional
Probab=98.96 E-value=2.8e-07 Score=100.45 Aligned_cols=171 Identities=11% Similarity=0.068 Sum_probs=107.8
Q ss_pred HHHHHHHHHHcC-----CCCCC-ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFLN-----ISEND-YGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l~-----a~~~e-y~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.+++++. .++++ ..|++|+|+++++.+++..+ .++||+|++.. .|+. ... .++...|++++.+
T Consensus 47 ~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~-~~~---~~~~~~g~~vv~v 121 (388)
T PRK08637 47 PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF-VDQGDTVLLPDHNWGN-YKL---TFNTRRGAEIVTY 121 (388)
T ss_pred HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh-cCCCCEEEEcCCCCcc-HHH---HHHHhcCCEEEEe
Confidence 367777777652 33221 25899999999999999998 58999977543 4432 211 1223479999999
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhh-----CCcEEEEecccc----C
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQE-----NDWHILIDACAL----G 312 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~-----~g~~vlvDaaq~----~ 312 (632)
+...++..++++++++.++... ++...+++++..+|+||..++.+ + +++|++ +++++++|-+-. .
T Consensus 122 ~~~~~~~~~d~~~l~~~~~~~~--~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~ 199 (388)
T PRK08637 122 PIFDEDGGFDTDALKEALQAAY--NKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYE 199 (388)
T ss_pred cccCCCCcCCHHHHHHHHHhhc--cCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccC
Confidence 9832344689999999887210 11346788888899999999876 5 445553 899999998632 1
Q ss_pred CCCCCCC--CCCCCCCcE---EEEccccccCCCCCceEEEEEe
Q 006746 313 PKDMDSF--GLSLVRPDF---LICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 313 g~~m~~l--dls~~~~Df---~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
+..+.++ .+....... .+.|+-|.|+.+---+|.+++.
T Consensus 200 ~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 200 DSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred CccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 2211111 111111122 2348999877532345877764
No 297
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.96 E-value=9.8e-08 Score=102.32 Aligned_cols=270 Identities=16% Similarity=0.168 Sum_probs=182.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC---CC-CC-C--eEEEeccccchhhHHHHHHHHhcCCE
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP---FM-SV-K--NLLTVYDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~---~~-~g-d--~ilt~~d~~s~~v~~~~~~a~~~G~~ 241 (632)
.++..++-..++.+||+++++....+ .+.|+++-+.-..+. .+ .| + ++++... +...+..+++..+++
T Consensus 119 ~~~e~~~Vnm~~~L~~~~~~~~g~~t-~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~----v~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 119 RKLEAECVNMIANLFNAPSDSCGCGT-VGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN----VHAAFEKAARYFEVE 193 (491)
T ss_pred HHHHHHHHHHHHHHhcCCccccCccc-cccchHHHHHHHHHHHHHHhccCCCCccccchHH----HHHHHHHHHhhEEEE
Confidence 46778899999999999977555544 466777444333331 11 11 1 1333332 233446677888999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh-CCcEEEEeccccC---C-C-
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE-NDWHILIDACALG---P-K- 314 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~-~g~~vlvDaaq~~---g-~- 314 (632)
++.+|++..+.++|+.++.+.++++| .+++.+..+.++|..=|++ +++++.+ .++.+.|||+... | .
T Consensus 194 l~~V~~~~~~~~~D~~k~~~~i~eNt------i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~ 267 (491)
T KOG1383|consen 194 LREVPLDEGDYRVDPGKVVRMIDENT------IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGY 267 (491)
T ss_pred EEeeeccccceEecHHHHHHHhccce------EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccc
Confidence 99999998888999999999999875 8999999999999999999 9999998 9999999997432 2 1
Q ss_pred -CCCCCCCCCCCCcEEEEcccc-ccCCCCCceEEEEEeCCCccccCCC------CCCCceeecccccccccccccCCCCC
Q 006746 315 -DMDSFGLSLVRPDFLICSFYQ-IFGENPSGFGCLFVKKSTVPILVDN------TSSGMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 315 -~m~~ldls~~~~Df~~~S~hK-~~G~~P~G~G~L~Vr~~~~~~L~~~------~~gG~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
.+.++|+..-++--+.++.|| -|- |.|+|..+-|.+-+ +... |.||...
T Consensus 268 ~~~~~fdFr~p~V~Sisa~~HKYGl~--~~G~~~vl~r~k~~--~~~q~~~~~~w~Gg~y~------------------- 324 (491)
T KOG1383|consen 268 LNEEEFDFRVPGVTSISADGHKYGLA--PAGSSWVLYRNKEL--LPHQLFFHTDWLGGIYA------------------- 324 (491)
T ss_pred cCccccccCCCCceeEeeccceeeee--ecCcEEEEEccccc--ccceEEEeccccCcccc-------------------
Confidence 124678888888889999999 455 88999887776542 2222 2222110
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 466 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I 466 (632)
.-|.+++ |+|..- +.++ ++|=.+-..|..+.
T Consensus 325 -------------s~TlngS--------R~g~~v---a~~w-------------------------a~~~~lG~eGY~~~ 355 (491)
T KOG1383|consen 325 -------------SPTLNGS--------RPGSQV---AAQW-------------------------AALMSLGEEGYREN 355 (491)
T ss_pred -------------CcccccC--------CcccHH---HHHH-------------------------HHHHHhhHHHHHHH
Confidence 1112221 122110 1122 23322333466677
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEE
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISL 538 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~l 538 (632)
.+++..-+..|+++++++ +.+.|||+ |.|+|..++.+. ++-..+..++.+.|=.+
T Consensus 356 ~~~ive~~~~l~egie~i--------~~i~i~gk-------p~vs~~~~~s~~--~~i~elsd~l~~~GW~l 410 (491)
T KOG1383|consen 356 TQNIVETARKLREGIENI--------KGIKIVGK-------PLVSFILFGSND--VNIFELSDLLRKKGWIL 410 (491)
T ss_pred HHHHHHHHHHHHHhhhcc--------ccceecCC-------CcEEEEEccCCc--cchhhhhHHHHhcCcCc
Confidence 777888888999999988 56899987 568888887654 66667777777766444
No 298
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.94 E-value=1.8e-07 Score=103.66 Aligned_cols=310 Identities=10% Similarity=0.058 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHHH---H-HhcC----
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIRT---S-EKRG---- 239 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~~---a-~~~G---- 239 (632)
+...+.-+++++++.- ....|.|++++++|...+++.-. +....+|+ ....||......|.-. . .+.+
T Consensus 86 ~~~~~la~~L~~~~~~--~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~ 163 (433)
T PRK08117 86 ESILKLAEELAEITPG--GLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPL 163 (433)
T ss_pred HHHHHHHHHHHHhCCC--CCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCC
Confidence 4445777888888732 22379999999999887665421 22223455 4456776333222100 0 0011
Q ss_pred -CEEEEEeccCCc----cc-------cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCc
Q 006746 240 -ARVMSAEFSWPR----LR-------INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDW 302 (632)
Q Consensus 240 -~~v~~v~~~~~~----~~-------i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~ 302 (632)
..+..+|..... +. .+.+++++.+.... ....+..|++--+....|.+.| ++ +.++|+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 242 (433)
T PRK08117 164 LGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGI 242 (433)
T ss_pred CCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 112334332100 00 13455666665311 1235778888888888999999 88 9999999999
Q ss_pred EEEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeeccccccccc
Q 006746 303 HILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWL 377 (632)
Q Consensus 303 ~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~ 377 (632)
++++|-++.+ |.. +....--...||+ .++=|.+| + | +|++..+++.++.+.....++
T Consensus 243 llI~DEv~tG~gr~G~~~~~~~~gv~pDi--~t~sK~lg--~-G~pigav~~~~~i~~~~~~~~~~~------------- 304 (433)
T PRK08117 243 LLIFDEVQTGFGRTGEWFAAQTFGVVPDI--MTIAKGIA--S-GLPLSAVVASKELMEQWPLGSHGT------------- 304 (433)
T ss_pred EEEEecchhccCccccchhHhhcCCCCCE--eehhhhcc--C-CCcceeEEEcHHHHhhccCCCCCC-------------
Confidence 9999998763 211 1001111235786 57779776 2 4 788888877665443211110
Q ss_pred ccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHH
Q 006746 378 TDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ 457 (632)
Q Consensus 378 ~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~ 457 (632)
| |.+ |.....+. .++|+.
T Consensus 305 ------------------------T--~~~------------np~~~aaa------------------------~a~L~~ 322 (433)
T PRK08117 305 ------------------------T--FGG------------NPVACAAA------------------------LATLEV 322 (433)
T ss_pred ------------------------C--CCc------------CHHHHHHH------------------------HHHHHH
Confidence 0 000 00001111 156665
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc--cCHHHHHHHHHhCC
Q 006746 458 VDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK--IEPVLVQKLADREN 535 (632)
Q Consensus 458 ~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~--i~~~~V~kla~~~g 535 (632)
+.+ +.+.++++.+.+++.+.|.++... .+.+ +. -..+|-++.+.+.+.+++. -....+.+.+.++|
T Consensus 323 l~~---~~l~~~~~~~g~~l~~~L~~l~~~----~~~~---~~--vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~G 390 (433)
T PRK08117 323 IKE---EKLLDNANEMGAYALERLEVLKEK----HPVI---GD--VRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKG 390 (433)
T ss_pred HHh---ccHHHHHHHHHHHHHHHHHHHHhc----CCce---ee--eecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCC
Confidence 543 356788888899999988887311 1211 10 1234556666665433221 11233445555678
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|.+... .....++|+++.+..|.+||+++++.|.+.++.
T Consensus 391 v~~~~~--------------------------------------g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 391 LLFYLC--------------------------------------GNAGNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred CEEeec--------------------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 876421 012358999999999999999999999988753
No 299
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.94 E-value=1.9e-07 Score=94.23 Aligned_cols=309 Identities=16% Similarity=0.188 Sum_probs=191.1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEeCC-HHHHHHHHHhhCC-CCCCCe---EEEeccccchhhHHHHHHHHhcCCEE
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFTAN-RTSAFKLLAESYP-FMSVKN---LLTVYDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft~n-aT~al~lv~~sl~-~~~gd~---ilt~~d~~s~~v~~~~~~a~~~G~~v 242 (632)
...+++++...+.+++|+| ++|.|+|.++ +|..+..+.-.+- ++.|+. |+|-. - | -.. .+-|++.|.--
T Consensus 50 f~kii~~tes~lreLlniP-dn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGs-W-S--~KA-~~EAkk~~~~~ 123 (370)
T KOG2790|consen 50 FAKIINDTESLLRELLNIP-DNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGS-W-S--AKA-AEEAKKYGTPN 123 (370)
T ss_pred HHHHHHHHHHHHHHHHcCC-CceeEEEEeCCCcccccccchhhhccccCCccceEEecc-c-c--HHH-HHHHHhhCCce
Confidence 4689999999999999998 5689999874 6666666655542 355543 44321 1 1 111 23356777653
Q ss_pred EEEe-ccC-Ccccc-CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCC
Q 006746 243 MSAE-FSW-PRLRI-NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSF 319 (632)
Q Consensus 243 ~~v~-~~~-~~~~i-~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~l 319 (632)
..++ ... .-+.+ +.+.++ +++ .-+.+-++....+-|+-+|-- ..---+|..++.|.++-.-. .++
T Consensus 124 ~V~~~~k~y~ygkvPd~~~w~--~~~------da~yvyyCaNETVHGVEf~~~--P~~~~~~~vlVaDmSSnflS--rpv 191 (370)
T KOG2790|consen 124 IVIPKLKSYTYGKVPDPSTWE--LNP------DASYVYYCANETVHGVEFDFI--PVNDPKGAVLVADMSSNFLS--RPV 191 (370)
T ss_pred EEeccccccccCcCCChhhcc--cCC------CccEEEEecCceeeceecCCC--CCCCCCCceEEEecccchhc--CCc
Confidence 3333 221 11123 333332 122 236899999999999887531 11134688899999765533 499
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
|++++ +.+....+|-.| |.|+-+.+||++++....+.... + .. |-...++ ..+
T Consensus 192 Dvsk~--gvi~aGAQKN~G--~aG~Tvvivr~dllg~~~~~tP~--v---~d---yk~~~~N-----------nSl---- 244 (370)
T KOG2790|consen 192 DVSKF--GVIFAGAQKNVG--PAGVTVVIVRKDLLGNALDITPS--V---LD---YKIMDKN-----------NSL---- 244 (370)
T ss_pred cchhc--ceEEeccccccC--ccccEEEEEehhhhcccccCCcc--c---cc---eeeeccc-----------ccc----
Confidence 99876 567788999999 99999999999998654432210 0 00 0000000 000
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLV 478 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~ 478 (632)
-.|+| +..|+.++ ..|+++.+- |+..+++-...-+..|+
T Consensus 245 yNTpP----------------~f~iy~~~------------------------Lv~~~il~~GGl~a~e~~n~~KskllY 284 (370)
T KOG2790|consen 245 YNTPP----------------CFGIYVMG------------------------LVFEWILEKGGLAAMEKLNQEKSKLLY 284 (370)
T ss_pred ccCCC----------------eeeeeehh------------------------hHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 12232 33344444 678877664 69999999999999999
Q ss_pred HHHHccCCCCCCCCCcEEEECCCCCCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhh
Q 006746 479 NALMKLQHPNTEGNALVKIYGPKIRFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 557 (632)
Q Consensus 479 ~~L~~l~h~~~~G~p~v~Iygp~~~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~ 557 (632)
+.+.+-+ |. -+.|-++..|+ =-|.|.+.+.. ++.+.+.+.++++=|++.
T Consensus 285 d~iD~s~-----gf----y~cpVe~~~RS~MNV~Fri~~d~---Le~eFLkeA~~~~mv~LK------------------ 334 (370)
T KOG2790|consen 285 DAIDNSN-----GF----YRCPVEPSVRSRMNVPFRIEKDE---LEAEFLKEAAKEHMVQLK------------------ 334 (370)
T ss_pred HHHHhcC-----Ce----EEcccchhhhhhcccceeecchH---HHHHHHHHHHHhhhhccc------------------
Confidence 9998752 22 12343334444 34667776421 455555555444333331
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+..|.+|+|+----+.|++++|++|+++|...
T Consensus 335 ---------------------GhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 335 ---------------------GHRSVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred ---------------------cccccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 3445789999998888999999999999999653
No 300
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=98.94 E-value=2.2e-07 Score=104.55 Aligned_cols=152 Identities=13% Similarity=0.111 Sum_probs=102.7
Q ss_pred ccEEEeCCHHHHHHHHHhhC----CCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCC-c-----cccCHHH
Q 006746 190 YGMVFTANRTSAFKLLAESY----PFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWP-R-----LRINSEK 258 (632)
Q Consensus 190 y~vvft~naT~al~lv~~sl----~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~-~-----~~i~~~~ 258 (632)
.+|+.|+|+++||..+..++ -..+||+|++.. .|+. +..+.+. ...|++++.++.+.. . ..++.++
T Consensus 156 ~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~--y~~~~~l-~~~g~~vv~i~~~~~~~~g~~~~~~d~~~ 232 (521)
T TIGR03801 156 FDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTP--YLEIPEL-PRYDFEVVRIKADEMTEDGTHTWQYPDKE 232 (521)
T ss_pred CeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHH--HHHHHHH-hcCCcEEEEeecccccccccccCCCCHHH
Confidence 37999999999999988873 268999987543 4432 2121221 235788888876522 1 5678899
Q ss_pred HHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhC--CcEEEEecccc--CCCCCCCCCCCCCC-CcEE
Q 006746 259 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQEN--DWHILIDACAL--GPKDMDSFGLSLVR-PDFL 329 (632)
Q Consensus 259 l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~--g~~vlvDaaq~--~g~~m~~ldls~~~-~Df~ 329 (632)
++++++++ ++++.+..-+|+||..++. + |+++|+++ ++++|.|-+-. .. +..++ ++... -=++
T Consensus 233 l~~~~~~~------~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~~~sl-~~~~~~~vI~ 304 (521)
T TIGR03801 233 LEKLRDPS------IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD-DFRSL-FAELPYNTIG 304 (521)
T ss_pred HHHhcCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc-cccch-hhhCCCCEEE
Confidence 98876553 4888888889999999994 4 56778875 89999998632 22 11121 11111 1378
Q ss_pred EEccccccCCCCCceEEEEEeCC
Q 006746 330 ICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 330 ~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
+.|+-|.||.+---+|+++..++
T Consensus 305 v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 305 VYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred EEcchhhccCchhhhhhhhcCch
Confidence 88999999964344688888764
No 301
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.93 E-value=7.3e-07 Score=95.38 Aligned_cols=295 Identities=12% Similarity=0.163 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CC--CC-CeEEE-eccccchhhHHHH---HHHHhcCCE
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FM--SV-KNLLT-VYDYESEAVEAMI---RTSEKRGAR 241 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~--~g-d~ilt-~~d~~s~~v~~~~---~~a~~~G~~ 241 (632)
+...+.-+++.+..+ ..+ .|.|++|+|||++.++.--. |. ++ .+|++ ...+|.-..-.+. +-..+++..
T Consensus 84 ~~~~~la~~L~~~s~-~~d--~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~ 160 (404)
T COG4992 84 EPQAELAEKLVELSP-FAD--RVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFG 160 (404)
T ss_pred hHHHHHHHHHHhhCc-ccc--EEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCC
Confidence 334466666777765 222 79999999999998765421 22 22 34664 4566642221110 000112221
Q ss_pred -----EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H----HHHHhhCCcEEEEecccc
Q 006746 242 -----VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W----MRIAQENDWHILIDACAL 311 (632)
Q Consensus 242 -----v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i----~~~a~~~g~~vlvDaaq~ 311 (632)
++.+|+. |+++++++|+++| ..|++--+.-..|++.|-+ . -++|+++|+++|+|-.|.
T Consensus 161 Pl~~g~~~vpfn------Di~al~~ai~~~t------aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt 228 (404)
T COG4992 161 PLLPGFRHVPFN------DIEALEAAIDEDT------AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT 228 (404)
T ss_pred CCCCCceecCCC------CHHHHHHHhccCe------EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc
Confidence 3344442 7899999999864 8889999999999998755 3 356889999999999998
Q ss_pred C-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 312 G-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 312 ~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
+ |.. |--..-....||.++.. |-+|. --=+|+++.++...+.+.|-..|.+
T Consensus 229 G~GRTGk~fA~e~~gV~PDI~tla--K~LgG-G~PigA~la~~~~~~~~~~G~HgST----------------------- 282 (404)
T COG4992 229 GLGRTGKLFAYEHYGVEPDILTLA--KALGG-GFPIGAMLATEEIASAFTPGDHGST----------------------- 282 (404)
T ss_pred CCCccchHHHHHHhCCCCCEEEee--ccccC-CccceeeEEchhhhhcCCCCcccCC-----------------------
Confidence 7 321 11111223478988765 84442 2337999998654544443211100
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
| +| .+++. + ...++|+.+.+ +.+-+
T Consensus 283 ------f----GG-----NpLac--------------A-----------------------v~~a~l~~l~~---e~ll~ 307 (404)
T COG4992 283 ------F----GG-----NPLAC--------------A-----------------------VALAVLEVLLE---EGLLE 307 (404)
T ss_pred ------C----Cc-----CHHHH--------------H-----------------------HHHHHHHHHcc---hhHHH
Confidence 0 11 01110 0 01256666654 56678
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
+++.+..+|++.|.++.++. |+|+ . . .-+|=++.+.+.+. .....+.+.+.++|+-+-.
T Consensus 308 ~v~~~g~~~~~~L~~l~~~~----~~v~---~-v-RG~GLmiGiel~~~----~~a~~~~~~~~~~gvL~~~-------- 366 (404)
T COG4992 308 NVREKGEYLLQRLRELKRRY----PLVK---E-V-RGRGLMIGIELKEP----YRARDIVRALREEGVLVLP-------- 366 (404)
T ss_pred HHHHHHHHHHHHHHHHhhcC----Ccee---e-e-ecceeEEEEEecCc----ccHHHHHHHHHHCCeEEec--------
Confidence 89999999999999996643 3331 0 1 12456666766652 1345566666667765531
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
.+..+||+.+.+.-+.|||+..++.+++.|...
T Consensus 367 --------------------------------a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 367 --------------------------------AGPNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred --------------------------------CCCCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 133499999999999999999999999988753
No 302
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.92 E-value=3.3e-07 Score=95.45 Aligned_cols=351 Identities=15% Similarity=0.152 Sum_probs=218.0
Q ss_pred CCCCCCCHHHHHHHhcCCCC-CCCCCCCCCCCCccccccccccccccccccccch--hHHHHHHHHHHHHHcCCCCCCcc
Q 006746 115 FGIGLFSYNQLHKQESSPSH-LRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE--SGLESAMKKRIMDFLNISENDYG 191 (632)
Q Consensus 115 ag~gl~~~~~~~a~~~~~~~-~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~--~~~~~~~R~~ia~~l~a~~~ey~ 191 (632)
++-.+.+.+|+|+.-..+.+ .++ +-|..++ ||+.+ .++.--++++.++.|+.+|+.+.
T Consensus 47 aSENFts~aVmeAlGS~ltNKYSE------------------GyPG~RY-YGGne~ID~iE~LCq~RALeaF~ldp~kWG 107 (477)
T KOG2467|consen 47 ASENFTSRAVMEALGSCLTNKYSE------------------GYPGARY-YGGNEYIDQIELLCQKRALEAFGLDPEKWG 107 (477)
T ss_pred ecccchHHHHHHHHhHHhhccccc------------------CCCcccc-cCcchHHHHHHHHHHHHHHHHhCCCHHHCc
Confidence 55667899999997665543 233 3344443 55543 34555578899999999998877
Q ss_pred EEEeC-CHHHHHHHHHhhCCCCCCCeEE---Eec-cccchhhHHHHHHHHhcCCEEEEE-------eccCCccccCHHHH
Q 006746 192 MVFTA-NRTSAFKLLAESYPFMSVKNLL---TVY-DYESEAVEAMIRTSEKRGARVMSA-------EFSWPRLRINSEKL 259 (632)
Q Consensus 192 vvft~-naT~al~lv~~sl~~~~gd~il---t~~-d~~s~~v~~~~~~a~~~G~~v~~v-------~~~~~~~~i~~~~l 259 (632)
|=.-+ +++-|.-.|-.++ .+|+++|. ++. .|-+ .-.+. ..+.+....+ .+++.+|-||-|.|
T Consensus 108 VNVQp~SGSPANfavYtal-l~Ph~RiMGLDLP~GGHLs--HGy~T---~~kkISa~SiyFeSmPYkv~~~TG~IDYD~L 181 (477)
T KOG2467|consen 108 VNVQPYSGSPANFAVYTAL-LKPHERIMGLDLPSGGHLS--HGYQT---PTKKISATSIYFESMPYKVDPSTGYIDYDKL 181 (477)
T ss_pred eeeccCCCCchhhHHHhhh-cCCCCeeeeccCCCCCccc--ccccc---CCceeeeeeeecccCceeeCCCCCceehHHH
Confidence 65444 6667766677777 78999975 222 3433 11111 1122222222 34556888999999
Q ss_pred HHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC-----CCCCCCCCCCCCcEEEEcc
Q 006746 260 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK-----DMDSFGLSLVRPDFLICSF 333 (632)
Q Consensus 260 ~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~-----~m~~ldls~~~~Df~~~S~ 333 (632)
++....- +++|++.-.. ..-..+|++ +-++|.+.|+++++|.|+.-|. -..|++ .+|++.+.-
T Consensus 182 e~~A~~f-----rPk~iiaG~S--aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe----y~DiVTTTT 250 (477)
T KOG2467|consen 182 EKTATLF-----RPKLIIAGTS--AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE----YCDIVTTTT 250 (477)
T ss_pred HHHHHhc-----CCcEEEeccc--cchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc----ccceeeccc
Confidence 8866543 2455543322 234567888 8899999999999998765432 112554 479999999
Q ss_pred cc-ccCCCCCceEEEEEeCCCccccCCCCCC-CceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchh
Q 006746 334 YQ-IFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSI 411 (632)
Q Consensus 334 hK-~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~ 411 (632)
|| +-| |+| |.++.|+.+.. .++.. | .+ .+ ++|.. .+|.-.-+
T Consensus 251 HKsLRG--PRg-~mIFyRkGvk~-~~~k~-g~~i---------~y--------dlE~k-------------INfaVFP~- 294 (477)
T KOG2467|consen 251 HKSLRG--PRG-AMIFYRKGVKS-IKPKQ-GKEI---------LY--------DLEDK-------------INFAVFPG- 294 (477)
T ss_pred cccccC--Ccc-eeEEEeccCCc-CCCCC-CCcc---------ee--------chhhh-------------hhhhcccc-
Confidence 99 677 864 77788886632 22211 1 11 01 12211 11111111
Q ss_pred hhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCC
Q 006746 412 EMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEG 491 (632)
Q Consensus 412 ~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G 491 (632)
..|.|+-..|.+++ .||++...-....-++++..-+.+|-++|.++ |
T Consensus 295 ---lQGGPHNhtIaalA------------------------vALkQa~tpefk~Yq~qV~~Nakala~~l~~~------G 341 (477)
T KOG2467|consen 295 ---LQGGPHNHTIAALA------------------------VALKQAMTPEFKEYQKQVLKNAKALASALISR------G 341 (477)
T ss_pred ---ccCCCCcchHHHHH------------------------HHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc------C
Confidence 24667777888887 89998887778888889999999999999988 6
Q ss_pred CCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccc
Q 006746 492 NALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKS 571 (632)
Q Consensus 492 ~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~ 571 (632)
..+|. |-.+ ...|-..+.. .| ++...|++.++.-+|.+- .-. |
T Consensus 342 y~lvt--gGTD----nHlvLvDLr~-~G--~dGarvE~vle~~~I~~N------KNt-----------------v----- 384 (477)
T KOG2467|consen 342 YKLVT--GGTD----NHLVLVDLRP-KG--VDGARVEKVLELCHIALN------KNT-----------------V----- 384 (477)
T ss_pred ceEec--CCcc----ceEEEEeccc-cC--CchHHHHHHHHHhhhhhc------CCc-----------------C-----
Confidence 44431 2211 1233333332 33 888999999998777642 100 0
Q ss_pred cccccccCCCCCcEEEEccCCCCC----HHHHHHHHHHHHHhh
Q 006746 572 DNNRKDKANLGITVVTASLGYLAN----FEDVYRLWAFVAQFL 610 (632)
Q Consensus 572 ~~~~~~~~~~~~~~VRvSlg~~~t----~eDV~rlv~~l~~~l 610 (632)
+. |+....+|.||+..--+|| ++|..+..+||.+-+
T Consensus 385 pG---D~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 385 PG---DKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred CC---CccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 00 0123456899999888886 788888888876643
No 303
>PRK06541 hypothetical protein; Provisional
Probab=98.92 E-value=6.3e-07 Score=100.02 Aligned_cols=352 Identities=13% Similarity=0.068 Sum_probs=193.8
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.+... + ++ .+. . + ..+...+.-+++.
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~----~-------~~------~~~--~--~---~~~~~~~la~~l~ 105 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTL----A-------FF------PLW--S--Y---AHPPAIELAERLA 105 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhC----c-------Cc------ccc--c--c---CCHHHHHHHHHHH
Confidence 57889997553 555677887766544321 0 00 000 0 0 1233345666677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCC-CeEE-EeccccchhhHHHHHHH----HhcC-----CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSV-KNLL-TVYDYESEAVEAMIRTS----EKRG-----ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~g-d~il-t~~d~~s~~v~~~~~~a----~~~G-----~~v~ 243 (632)
+++..+- ..|.|+.++|+|...+.+--. + +++ .+|+ ....||......+. .. .+.+ ..+.
T Consensus 106 ~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~g~~ 182 (460)
T PRK06541 106 ALAPGDL--NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALA-ITGLPAFKAPFEPLVPGGF 182 (460)
T ss_pred HhCCCCc--CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhc-CcCChhhccccCCCCCCcE
Confidence 7764322 279999999998887654211 1 112 3465 44567763322221 10 0111 1133
Q ss_pred EEeccCCccc-----cC--------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEE
Q 006746 244 SAEFSWPRLR-----IN--------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHIL 305 (632)
Q Consensus 244 ~v~~~~~~~~-----i~--------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vl 305 (632)
.+|.. .... -+ .+.+++.+.... ...+..|++.-+.+..|...| ++ +.++|+++|++++
T Consensus 183 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI 259 (460)
T PRK06541 183 RVPNT-NFYRAPELGDDPEAFGRWAADRIEEAIEFEG--PDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLV 259 (460)
T ss_pred EeCCC-ccccccccCCCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 33322 0000 01 256777775321 235678888888889999999 88 8999999999999
Q ss_pred Eecccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccC
Q 006746 306 IDACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 306 vDaaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
+|-++. +|.- +.....-...||+++ +=|.+|..-.-+|+++++++.++.+.+.. . . +.
T Consensus 260 ~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G~~pigav~~~~~i~~~~~~~~-~-~---------~~------ 320 (460)
T PRK06541 260 SDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSGYSPLGAMIASDRLFEPFLDGP-T-M---------FL------ 320 (460)
T ss_pred EechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCCccceeEEEEcHHHHHHhhcCC-C-c---------cc------
Confidence 999873 3421 111111223689876 56866620002799999888765443210 0 0 00
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
..+|.. ..+++. ..+ .+.|+.+.+
T Consensus 321 ----------------~~~T~~-gnp~~~------------aaa-------------------------la~l~~l~~-- 344 (460)
T PRK06541 321 ----------------HGYTFG-GHPVSA------------AVA-------------------------LANLDIFER-- 344 (460)
T ss_pred ----------------cCCCCC-CCHHHH------------HHH-------------------------HHHHHHHHh--
Confidence 001100 001110 011 145565544
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC--CccCH--------HHHHHHHH
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR--EKIEP--------VLVQKLAD 532 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G--~~i~~--------~~V~kla~ 532 (632)
+.+.++++.+.++|.+.|.++.- .|.+.-. ...|.++.+.+.+... +.+.. ..+.+.+-
T Consensus 345 -~~~~~~~~~~g~~l~~~L~~l~~-----~~~v~~v-----rg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 413 (460)
T PRK06541 345 -EGLLDHVRDNEPAFRATLEKLLD-----LPIVGDV-----RGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALF 413 (460)
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhc-----CCCeEEE-----EecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH
Confidence 34568889999999999988721 1322111 1346777777643211 11111 13444445
Q ss_pred hCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 533 RENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 533 ~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
++||.++.. ..+..+||+++.+..|.+||+++++.+.+.|..
T Consensus 414 ~~Gi~~~~~--------------------------------------~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 414 EAGLYCRAD--------------------------------------DRGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred hCCeEEEec--------------------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 678887531 112358999999999999999999999988753
No 304
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.92 E-value=7.8e-07 Score=96.25 Aligned_cols=201 Identities=12% Similarity=0.139 Sum_probs=120.6
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+ .|--.+.+++++.+.+... + .+ .+ . + ..+...+.-++++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~----~-------~~------~~---~--~---~~~~~~~la~~l~ 76 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKL----V-------VA------GP---M--F---EHEEKEEMLEELS 76 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhc----C-------Cc------cC---C--c---CCHHHHHHHHHHH
Confidence 5788999754 4555567778766544321 0 00 00 0 1 1234456777788
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC-CeEE-EeccccchhhHHHHHH---HHhcCC-----EEEEEeccCC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSV-KNLL-TVYDYESEAVEAMIRT---SEKRGA-----RVMSAEFSWP 250 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g-d~il-t~~d~~s~~v~~~~~~---a~~~G~-----~v~~v~~~~~ 250 (632)
++++.+ .++|++++|+|+..+.+.....+| ++|+ ....||......+.-. ..+.+. .+..+|+
T Consensus 77 ~~~~~~----~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~--- 149 (364)
T PRK04013 77 KWVNYE----YVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF--- 149 (364)
T ss_pred hhcCCC----EEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC---
Confidence 887543 699999999999988776543345 5665 4557776332222100 001121 1222222
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC---CCCCCCCCCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG---PKDMDSFGLS 322 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~---g~~m~~ldls 322 (632)
-+.+++++.|.++ ++.|++..+....|...| ++ +.++|+++|+++++|-+|.+ |. +.....-
T Consensus 150 ---~d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~-~~a~~~~ 219 (364)
T PRK04013 150 ---NDVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK-FLAIEHY 219 (364)
T ss_pred ---CCHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc-hhHHHhc
Confidence 1567888877643 477777777777777654 67 78899999999999998774 32 1222223
Q ss_pred CCCCcEEEEccccccCC-CCCceEEEEEeCCC
Q 006746 323 LVRPDFLICSFYQIFGE-NPSGFGCLFVKKST 353 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~-~P~G~G~L~Vr~~~ 353 (632)
...||++++ =|.+|. .| +|+++.+++.
T Consensus 220 gv~PDiv~~--gK~lggG~P--~~a~~~~~~~ 247 (364)
T PRK04013 220 KVEPDIVTM--GKGIGNGVP--VSLTLTNFDV 247 (364)
T ss_pred CCCCCEEEe--cccccCCce--eEEEEecccc
Confidence 457898887 474442 12 6777777654
No 305
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.91 E-value=4.2e-07 Score=100.24 Aligned_cols=213 Identities=15% Similarity=0.123 Sum_probs=123.6
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..++ |--++.+++++.+.+... + + |+. ......+.+++|+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~----~--------------------~--~~~-~~~~~~~lae~l~ 98 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG----T--------------------S--YGA-PTEAEILLAKEII 98 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhC----C--------------------c--CCC-CCHHHHHHHHHHH
Confidence 67889997543 456688888876544321 0 0 000 1233457899999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccC-------Cc
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSW-------PR 251 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~-------~~ 251 (632)
+++... ..|+||.++|+|+..++... .+..+++|++ ...||. ...++.... ..|......+... +.
T Consensus 99 ~~~~~~---~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 173 (423)
T TIGR00713 99 SRVPSV---EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHG-HHDALLVKA-GSGAATLGLPTSPGVPEDFAKL 173 (423)
T ss_pred HhCCcc---cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCC-Chhhhhccc-cCcccccCCCCCCCCCcccccc
Confidence 987643 26999999999999866532 1234456664 445665 222221100 0111110001000 00
Q ss_pred -c---ccCHHHHHHHHHhcCcCCCceeEEEE-eccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CC-CCCCC
Q 006746 252 -L---RINSEKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PK-DMDSF 319 (632)
Q Consensus 252 -~---~i~~~~l~~~i~~~~~~~~~~~Lv~~-~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~-~m~~l 319 (632)
. .-+++++++.+... ..+++.|++ |..+| +|...| ++ +.++|+++|+++++|-++.. .. .+...
T Consensus 174 ~~~~~~~d~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~ 249 (423)
T TIGR00713 174 TLVLPYNDLEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQ 249 (423)
T ss_pred eEEeCCCCHHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhH
Confidence 0 02688999888742 124566666 56666 899988 56 88999999999999998753 11 01111
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
......||++ ++=|.+|. -.-+|+++.+++.++.+.
T Consensus 250 ~~~~~~pDi~--t~sK~l~~-G~pig~v~~~~~i~~~~~ 285 (423)
T TIGR00713 250 EYFGVEPDLT--TLGKIIGG-GLPVGAFGGRREIMERLA 285 (423)
T ss_pred HHhCCCcchh--hhhhhhcC-CCceeeeeEHHHHHHhhC
Confidence 1122357854 67897772 112799998888776554
No 306
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.91 E-value=4.1e-07 Score=102.47 Aligned_cols=352 Identities=14% Similarity=0.178 Sum_probs=194.5
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++-|||..+ .|--.+.+++++.+.+... + ++ ... ++. ..+...+.-+++.
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~----~-------~~------~~~-----~~~-~~~~~~~lae~L~ 143 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKL----P-------FY------HSF-----WNR-TTKPSLDLAKELL 143 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhc----c-------ce------ecc-----ccc-CcHHHHHHHHHHH
Confidence 5788999654 4545567777766544321 1 00 000 000 1233345556666
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC------CCCC-CeEE-EeccccchhhHHHHHHH------HhcCC---EEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP------FMSV-KNLL-TVYDYESEAVEAMIRTS------EKRGA---RVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~------~~~g-d~il-t~~d~~s~~v~~~~~~a------~~~G~---~v~ 243 (632)
+++.-. +-..+.|++++++|...+++... -.++ .+|+ ....||......+. +. +..+. .+.
T Consensus 144 ~~~~~~-~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~s-lsg~~~~~~~~~~~~~~~~ 221 (504)
T PLN02760 144 EMFTAR-KMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISAS-LSGLPALHQKFDLPAPFVL 221 (504)
T ss_pred hhcCCC-CCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhh-ccCChhhccCCCCCCCCcE
Confidence 665321 11268999999999997766431 1123 3455 45578864332221 10 01111 122
Q ss_pred EEecc--C----Ccc------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEE
Q 006746 244 SAEFS--W----PRL------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILI 306 (632)
Q Consensus 244 ~v~~~--~----~~~------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlv 306 (632)
.++.+ + +.. ....++++++|.... ...+..|++--+....|...| ++ +.++|+++|+++|+
T Consensus 222 ~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~ 299 (504)
T PLN02760 222 HTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEG--PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIA 299 (504)
T ss_pred EeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEe
Confidence 22221 0 000 011245666665311 235677788777778899998 88 99999999999999
Q ss_pred ecccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCC-CceeecccccccccccccC
Q 006746 307 DACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 307 Daaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~ 382 (632)
|-+|. +|.- |...+.....||++++ =|.+|..---+|++.++++.++.+.+.... |...
T Consensus 300 DEV~TGfGRtG~~~a~e~~gv~PDivtl--gK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~--------------- 362 (504)
T PLN02760 300 DEVICAFGRLGTMFGCDKYNIKPDLVSL--AKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFA--------------- 362 (504)
T ss_pred cchhhCCcccchhhHHHhcCCCCcEEEe--cccccCCccccceEeecHHHHhhhhcccccccCcc---------------
Confidence 99884 3321 1111222236997665 586652100278899998887655432100 0000
Q ss_pred CCCCCccccchhhhhhhccccCCC-ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFS-GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL 461 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~-~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~ 461 (632)
..+| |. .+++. ..+ .+.|+.+.+.
T Consensus 363 ----------------h~~T--~~gnPl~~------------Aaa-------------------------la~Le~i~~~ 387 (504)
T PLN02760 363 ----------------HGFT--YSGHPVSC------------AVA-------------------------LEALKIYKER 387 (504)
T ss_pred ----------------cCCC--CCCCHHHH------------HHH-------------------------HHHHHHHHhC
Confidence 0111 11 01110 111 2567766653
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCC--CccC-----HHHHHHHHHh
Q 006746 462 GLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADR 533 (632)
Q Consensus 462 Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G--~~i~-----~~~V~kla~~ 533 (632)
.+.+|++.+.++|++.|.++.. .|.| .| .-+|.++.+.+.+..+ +... ...+.+.+.+
T Consensus 388 ---~l~~~~~~~g~~l~~~L~~l~~-----~~~v~~v------rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~ 453 (504)
T PLN02760 388 ---NIPEHVNKIAPRFQDGIKAFSG-----SPIIGEI------RGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKK 453 (504)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhc-----CCCeeeE------EeCceEEEEEEecCCcccccccchhHHHHHHHHHHHh
Confidence 5688999999999999988721 1322 12 1356777777755322 1111 2234444556
Q ss_pred CCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 534 ENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 534 ~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+||.++.. + .++|+++.+..|.+||+++++.+.+.|+.
T Consensus 454 ~Gvl~~~~----------------------------------------g-~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 454 RGMLVRVA----------------------------------------G-DNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred CCcEEEec----------------------------------------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 78776421 1 37899999999999999999999998865
No 307
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=98.91 E-value=4.2e-07 Score=95.49 Aligned_cols=292 Identities=12% Similarity=0.125 Sum_probs=177.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCH---HHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANR---TSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~na---T~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
.+..+.+|++-+-+. .++|++.- -+-|-+++.-+| |=+|..+..+|+..+.++ +..|+.-....-
T Consensus 219 v~LE~eLA~LHqK~a---ALlFsSCfVANDstLftLak~lp---gcei~SD~gNHASMI~GI----rns~v~K~IFrH-- 286 (570)
T KOG1360|consen 219 VRLEAELADLHQKEA---ALLFSSCFVANDSTLFTLAKKLP---GCEIFSDEGNHASMIQGI----RNSRVPKHIFRH-- 286 (570)
T ss_pred hhHHHHHHHHhcCcc---eeeeeeeeeccchHHHHHHHHCC---CcEEeccccchHHHHHHh----hhcCCcceeecc--
Confidence 356677888776543 57777532 223556667664 556667666665333333 334544433332
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC------CCCCCCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD------MDSFGLS 322 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~------m~~ldls 322 (632)
-|+++|+++|..-. +..+++|+|--+.+++|.+.|++ |+.+|+++|+++.||-++++|.. +..=|==
T Consensus 287 ----ND~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGv 360 (570)
T KOG1360|consen 287 ----NDLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGV 360 (570)
T ss_pred ----CCHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCc
Confidence 37789999887632 34689999999999999999999 99999999999999998887531 0111111
Q ss_pred CCCCcEEEEccccccCCCCCceEE-EEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 323 LVRPDFLICSFYQIFGENPSGFGC-LFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G~G~-L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
..++|++....=|.||. +|. +....++++.++..-. |-+- ...
T Consensus 361 m~kvDiIsGTLgKafGc----VGGYIAat~~LvDmiRSyAa-GFIF-------------------------------TTS 404 (570)
T KOG1360|consen 361 MHKVDIISGTLGKAFGC----VGGYIAATRKLVDMIRSYAA-GFIF-------------------------------TTS 404 (570)
T ss_pred chhhhhcccchhhhccc----ccceehhhhhHHHHHHHhcC-ceEE-------------------------------ecC
Confidence 34678899999998883 333 3333444333322111 1110 000
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHh-hCHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDS-LGLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~-~Gl~~I~~r~~~L~~~L~~~ 480 (632)
.|+. ...-+| .+.+++.. .|.... ...+.-..++++.
T Consensus 405 LPP~----------------vl~GAl-------------------------eaVr~lk~~eg~~lR-~~hqrnv~~~kq~ 442 (570)
T KOG1360|consen 405 LPPM----------------VLAGAL-------------------------EAVRILKSEEGRVLR-RQHQRNVKYVKQL 442 (570)
T ss_pred CChH----------------HHHhHH-------------------------HHHHHHhhhhhHHHH-HHHHHHHHHHHHH
Confidence 0000 001112 45555554 343322 2334456788888
Q ss_pred HHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
|.++ |.|.+ ..-+.||-..+-|.. .....-.-|+.++||.+..-. .+.
T Consensus 443 l~~~------GiPVi--------~~pSHIiPv~vgda~---l~~~~sd~Li~~h~iYvQaIN---yPT------------ 490 (570)
T KOG1360|consen 443 LMEL------GIPVI--------PNPSHIIPVRVGDAA---LAKQASDILISKHNIYVQAIN---YPT------------ 490 (570)
T ss_pred HHHc------CCccc--------CCCcceeeeeccCHH---HHHHHHHHHHHhcCeEEEecc---CCc------------
Confidence 8888 87865 123567777666632 233333457788999986321 100
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
-.++..-+|+.+-+..|++=++.|++.|...-
T Consensus 491 ------------------V~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw 522 (570)
T KOG1360|consen 491 ------------------VARGTERLRIAPTPHHTPQMMNILVNALLDVW 522 (570)
T ss_pred ------------------ccccceeeecCCCCCCCHHHHHHHHHHHHHHH
Confidence 13466789999999999999999999887643
No 308
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.91 E-value=7.2e-07 Score=99.04 Aligned_cols=351 Identities=15% Similarity=0.144 Sum_probs=193.5
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.++..... +.+ + ...+...+.-++++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~--------~~~---------------~-~~~~~~~~la~~l~ 99 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYA--------PAF---------------Q-MGHPKAFELANRIA 99 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCc--------ccC---------------C-cCCHHHHHHHHHHH
Confidence 67889998654 677778888776544321000 000 0 01233346677777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CC-----CCC-CeEE-EeccccchhhHHHH-----HHHHhcC---CEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PF-----MSV-KNLL-TVYDYESEAVEAMI-----RTSEKRG---ARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~-----~~g-d~il-t~~d~~s~~v~~~~-----~~a~~~G---~~v~~ 244 (632)
+++... -..|.|+.++|+|+..+.+-- .+ +++ .+|+ ....||......+. ...+..+ ..+..
T Consensus 100 ~~~p~~--~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~ 177 (442)
T PRK13360 100 EIAPGG--LNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDH 177 (442)
T ss_pred HhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEE
Confidence 776322 127999999999888765431 11 122 3465 45567763222210 0001011 12333
Q ss_pred EeccCCccc--c----------CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEe
Q 006746 245 AEFSWPRLR--I----------NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILID 307 (632)
Q Consensus 245 v~~~~~~~~--i----------~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvD 307 (632)
+|......+ + ..++++++|.... ...+..|++.-+....|.+.| ++ +.++|+++|+++++|
T Consensus 178 ~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~D 255 (442)
T PRK13360 178 LPHTLDLARNAFSKGQPEHGAELADELERLVTLHD--ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFD 255 (442)
T ss_pred eCCCchhhccccCCChHHHHHHHHHHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 443210000 0 1456777775321 235678888888888999999 88 999999999999999
Q ss_pred cccc-CCCC--CCCCCCCCCCCcEEEEccccccCC--CCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccC
Q 006746 308 ACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGE--NPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 308 aaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~--~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
-+|. +|.- +.........||++++ =|.+|. -| +|++.++++.++.+......+ ..++ +
T Consensus 256 Ev~tG~GrtG~~~a~~~~gv~PDivt~--gK~l~gG~~P--~gav~~~~~i~~~~~~~~~~~--------~~~~--~--- 318 (442)
T PRK13360 256 EVITGFGRLGAPFAAQYFGVTPDLLTC--AKGLTNGAIP--MGAVFVSSEIHDAFMQGPEAG--------IEFF--H--- 318 (442)
T ss_pred chhhCCCCCccchhhhhcCCCCceeee--eeccccCccc--eEEEEEcHHHHHHhhcCCccc--------cccc--c---
Confidence 9884 3321 1111222346898754 685552 13 788888887765443210000 0000 0
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
.+| |.+ |.....+. .+.|+.+.+.
T Consensus 319 -----------------~~T--~~g------------~pl~~aaa------------------------~a~L~~l~~~- 342 (442)
T PRK13360 319 -----------------GYT--YSG------------HPLACAAA------------------------LATLDLYERE- 342 (442)
T ss_pred -----------------CCC--CCC------------CHHHHHHH------------------------HHHHHHHHhC-
Confidence 011 110 11111222 2677777654
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc-cCHHHHHHHHHhCCcEEccC
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-IEPVLVQKLADRENISLSYG 541 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~-i~~~~V~kla~~~gI~lr~G 541 (632)
.+.+|.+.+.++|.+.|.++.. .|.| ++ . .-+|..+.+.+.+.++.. -....+.+.+.++||.++.+
T Consensus 343 --~l~~~~~~~g~~l~~~l~~l~~-----~~~v---~~-v-rG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~ 410 (442)
T PRK13360 343 --GLLTRAARLAPYWEDALHSLRD-----APHV---ID-I-RNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT 410 (442)
T ss_pred --CHHHHHHHHHHHHHHHHHHhhc-----CCCe---ee-e-eccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec
Confidence 3567888889999999987731 1322 11 0 123444555554322111 01223444444578876421
Q ss_pred ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 542 SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 542 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..++|+++.+..|.+||+++++.+.+.|.
T Consensus 411 -----------------------------------------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 439 (442)
T PRK13360 411 -----------------------------------------GDILALSPPLIIEEAQIDELFDILAQALK 439 (442)
T ss_pred -----------------------------------------CCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 14799999999999999999999998874
No 309
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=98.90 E-value=9e-07 Score=93.29 Aligned_cols=174 Identities=13% Similarity=0.122 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.++++.+..-.++--+-...+..|+|+++.--++.++++.| -++||.|++.. -|+. .....+..|-++...|+
T Consensus 63 ~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~-T~~gd~Vvi~tPvY~P-----F~~~i~~n~R~~i~~pL 136 (388)
T COG1168 63 DELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRAL-TKPGDGVVIQTPVYPP-----FYNAIKLNGRKVIENPL 136 (388)
T ss_pred HHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHh-CcCCCeeEecCCCchH-----HHHHHhhcCcEEEeccc
Confidence 45777888888887666544458999999999999999999 58999976432 2332 23445678899999988
Q ss_pred cCCccc--cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 248 SWPRLR--INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 248 ~~~~~~--i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
..++++ +|.++|++.+.+. +++|+.++...|+||.... +. |..+|+++|+.|+.|--++- |+.-.
T Consensus 137 ~~~~~~y~iD~~~LE~~~~~~-----~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~ 211 (388)
T COG1168 137 VEDDGRYEIDFDALEKAFVDE-----RVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHI 211 (388)
T ss_pred cccCCcEEecHHHHHHHHhcC-----CccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCcc
Confidence 655544 5999999999875 3699999999999999975 44 67889999999999985432 31111
Q ss_pred CC-CCCCC--CCcEEEEccccccCCCCCceEEEEEeCCC
Q 006746 318 SF-GLSLV--RPDFLICSFYQIFGENPSGFGCLFVKKST 353 (632)
Q Consensus 318 ~l-dls~~--~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~ 353 (632)
++ .++.. +--+.+.|.-|.|+.+....+.+++.++.
T Consensus 212 ~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~ 250 (388)
T COG1168 212 PFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRE 250 (388)
T ss_pred chhhcChhhhcceEEEeeccccccchhhhheeEEecCHH
Confidence 21 23333 23466677789888532233445555443
No 310
>PRK06062 hypothetical protein; Provisional
Probab=98.89 E-value=1.1e-06 Score=97.85 Aligned_cols=220 Identities=11% Similarity=0.076 Sum_probs=123.7
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.+..... .++ . + ..+...+.-+++.
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~------------------~~~--~--~---~~~~~~~lae~L~ 105 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT------------------VAP--A--H---ANDARSEAARLIA 105 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCC------------------cCC--c--c---CCHHHHHHHHHHH
Confidence 67889998654 55567788876654432100 000 0 0 1233345666677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHHHH---hcC-----CEEEEEeccCC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRTSE---KRG-----ARVMSAEFSWP 250 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~a~---~~G-----~~v~~v~~~~~ 250 (632)
+++...- ..|.|+.++|+|...+++--..-.|+ +|++ ...||......+. ... .+. ..+..++...+
T Consensus 106 ~~~p~~~--~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~~~~p~~ 182 (451)
T PRK06062 106 ERAPGDL--SKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAIN-LTGDPRRWPNDTGRAGVVHFFGPFL 182 (451)
T ss_pred HhCCCCC--CEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHh-hcCCcccccCCCCCCCCEEeCCCCc
Confidence 7654221 27999999999988776532211343 4664 4567763332221 110 000 01222322111
Q ss_pred c-cc----cC-------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-
Q 006746 251 R-LR----IN-------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG- 312 (632)
Q Consensus 251 ~-~~----i~-------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~- 312 (632)
. .. -+ .++++++|... ...++..|++--+....|.+.| ++ +.++|+++|+++++|-+|.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGf 260 (451)
T PRK06062 183 YRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGF 260 (451)
T ss_pred cccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCC
Confidence 0 00 01 56677777532 1235677777777778899999 88 88999999999999998774
Q ss_pred CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 313 PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 313 g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
|.. |-..+.-...||++++ =|.+|..-.=+|+++.++++++.+.
T Consensus 261 GRtG~~~a~~~~gv~PDi~t~--gK~lggG~~Pigav~~~~~i~~~~~ 306 (451)
T PRK06062 261 GRTGKWFAIEHFGVVPDLITF--AKGVNSGYVPLGGVAISEAIAATFA 306 (451)
T ss_pred CcCcHHHHHHhcCCCCCeeee--chhhhcCCcCcEEEEEcHHHHHHhc
Confidence 321 1011112347897765 5866520001788999988765553
No 311
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.89 E-value=6.7e-07 Score=99.47 Aligned_cols=167 Identities=16% Similarity=0.133 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
..+.++.+.+|+.||++. ....++|+|.|++.+..+. ..+||.||++-+.|-+....|. ..|+..+++....
T Consensus 70 G~i~eAqe~aA~~fgAd~---tyFvvNGTS~ank~vi~a~-~~~GD~VLvdRN~HKSi~~gli----laGa~Pvyl~p~~ 141 (557)
T COG1982 70 GPIKEAQELAARVFGADH---TYFVVNGTSTANKAVINAV-LTPGDKVLVDRNCHKSIHHGLI----LAGATPVYLEPSR 141 (557)
T ss_pred ccHHHHHHHHHHHhCCCc---eEEEECCccHHHHHHHHhh-cCCCCEEEecCCccHHHHHHHH----HcCCceEEecCCC
Confidence 456799999999999974 5677899999999999998 7999999988765543455543 3589888886542
Q ss_pred -C----ccccCHHHHHHHHHhcCcCCCce-eEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCC---CCCCCC
Q 006746 250 -P----RLRINSEKLRKMVVSKGKKKKQR-GLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGP---KDMDSF 319 (632)
Q Consensus 250 -~----~~~i~~~~l~~~i~~~~~~~~~~-~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g---~~m~~l 319 (632)
+ -+.|+.+.+.+.+.++. .. ++++++. .+.-|+.++++ |++.++..+++|++|-++-+. ..|.+.
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~----~~~k~~vitn-pTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~ 216 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHP----DAEKLAVITN-PTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPE 216 (557)
T ss_pred CccccccCCCCHHHHHHHHHhCh----hhheeEEEec-CccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcc
Confidence 2 14588999999887643 12 5555544 56799999999 999999999999999876553 222222
Q ss_pred CCCC-CCCcEEEEccccccCCCCCceEEEEEeC
Q 006746 320 GLSL-VRPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 320 dls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
... .+.||++-|.||.+|. -+=...|-|++
T Consensus 217 -~~~~~~~~~~tqS~HK~l~a-lSQaS~iHv~~ 247 (557)
T COG1982 217 -SALNGGADFVTQSTHKLLAA-LSQASMIHVKD 247 (557)
T ss_pred -hhhhcCceEEEechhhhhhh-hhhhHHHhhCC
Confidence 222 6889999999998884 33344455554
No 312
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.89 E-value=3e-07 Score=107.99 Aligned_cols=362 Identities=12% Similarity=0.089 Sum_probs=202.0
Q ss_pred CCCchhHHHHHHhhccCcCCCCceEeecCCCCCCCH---HHH-HHHhcCCCCCCCCCCCCCCCCcccccccccccccccc
Q 006746 87 YFDTYQIDQIRAKEYYQLSLSNHTCLDYFGIGLFSY---NQL-HKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL 162 (632)
Q Consensus 87 y~~~~~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~---~~~-~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~ 162 (632)
.++.+.++++|+ +..+|++|-.+.|.|.+.. +++ +.+... |.+|- +|..=-| ..
T Consensus 61 ~sE~e~~~~~~~-----~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~--------~~~yT-------aYTPYQp--Ei 118 (954)
T PRK12566 61 LDEQAALARLRG-----YAEQNQVWTSLIGMGYHGTVTPTVILRNVLEN--------PGWYT-------AYTPYQP--EI 118 (954)
T ss_pred CCHHHHHHHHHH-----HHhcCCCccccccccccCCcCcHHHHHHHHhC--------chhhh-------cCCCCCc--hh
Confidence 333444555543 4447888999999998876 666 444331 21110 1100001 11
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCC--CCeEEEeccccchhhHHHHHHHHhcCC
Q 006746 163 LHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMS--VKNLLTVYDYESEAVEAMIRTSEKRGA 240 (632)
Q Consensus 163 ~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~--gd~ilt~~d~~s~~v~~~~~~a~~~G~ 240 (632)
.+|. -+.+=+....|+++.|.+-.+ --+--.+|.+-+.+.-+....+ ..+++++..-|.+...-++..++..|+
T Consensus 119 sQG~--Lqal~e~Qtmi~~LtGm~vaN--ASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~ 194 (954)
T PRK12566 119 AQGR--LEALLNFQQMTIDLTGLDLAN--ASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGF 194 (954)
T ss_pred hhHH--HHHHHHHHHHHHHHhCchhhh--hhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCc
Confidence 2232 244557888999999876321 1111244443332222222222 345766554444466667777888888
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccC-CCCccccchH-HHHHHhhCCcEEEEec--cccCCCCC
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHS-RMTGARYPYL-WMRIAQENDWHILIDA--CALGPKDM 316 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~s-n~TG~~~pl~-i~~~a~~~g~~vlvDa--aq~~g~~m 316 (632)
+++. +++++.+++ .++++-.+. |..|.+.+++ |++++|++|.++++-+ -++...
T Consensus 195 ~i~~------------~~~~~~~~~--------~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll-- 252 (954)
T PRK12566 195 ELVV------------DAVDNLAAH--------AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACVAADLLSLLVL-- 252 (954)
T ss_pred EEEE------------cchhhcCCC--------CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCC--
Confidence 8875 233333332 244444433 8999999999 9999999999866422 233222
Q ss_pred CCCCCCCCCCcEEEEcccc-----ccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 317 DSFGLSLVRPDFLICSFYQ-----IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK-----~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
.+- -++++|+++.+.+- -||. | +.|++-+|++....+.-...|=+++. ..+.-| .--+.+.+
T Consensus 253 ~~P--ge~GADI~vG~~Q~fGvp~~~GG-P-~ag~~a~~~~~~R~~PGRivG~s~D~--~G~~a~------~l~LqtRE- 319 (954)
T PRK12566 253 TPP--GELGADVVLGSTQRFGVPMGYGG-P-HAAYFACRDDYKRAMPGRIIGVSRDA--RGNTAL------RMALQTRE- 319 (954)
T ss_pred CCh--hhcCCcEEeeCCCcCCCCCCCCC-C-CeeeeeehHHHHhhCCCCccceeecC--CCCeee------ehhhhHHH-
Confidence 111 45789999998874 3553 3 79999999987666655555422211 000000 00011110
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH--HHHhhCHHHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD--QVDSLGLTMISRR 469 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd--~~~~~Gl~~I~~r 469 (632)
++ -++|. .|.|+---++|- ++ .+++= ++=..||..|.+|
T Consensus 320 QH--IRReK----------------AtSNICT~qaL~--------------------A~-~a~~Y~~~~Gp~Gl~~ia~~ 360 (954)
T PRK12566 320 QH--IRREK----------------ANSNICTAQVLL--------------------AN-IAGFYAVYHGPEGLKRIAQR 360 (954)
T ss_pred HH--hhhcc----------------ccchhhHHHHHH--------------------HH-HHHHHHHHhChHHHHHHHHH
Confidence 01 01122 344444334332 00 02221 1223578999999
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHH
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~ 549 (632)
+..++.+|.++|.+. |.. +... ..=-.+.+++ + .....+.+.+.+.||-+|.-
T Consensus 361 ~~~~a~~l~~~l~~~------g~~---~~~~----~fF~~~~v~~-~-----~~~~~~~~~a~~~~~n~r~~-------- 413 (954)
T PRK12566 361 VHRLTAILAAGLEAK------GIK---RLNR----HFFDTLTLEV-G-----GAQAAIIESAEAARINLRIL-------- 413 (954)
T ss_pred HHHHHHHHHHHHHhc------CCc---cccC----CccceEEEEc-c-----CCHHHHHHHHHHCCCeeEEe--------
Confidence 999999999999986 432 2111 1112333433 1 13556667777788888721
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
..+.|.||+.--+|.+||..|+..+.
T Consensus 414 --------------------------------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 414 --------------------------------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred --------------------------------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 12479999999999999999999874
No 313
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.87 E-value=2.2e-06 Score=94.66 Aligned_cols=347 Identities=12% Similarity=0.107 Sum_probs=190.2
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.+...... . +.....+...+.-+++.
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~------~------------------~~~~~~~~~~~la~~l~ 93 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHT------A------------------YQIVPYASYVTLAERIN 93 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccc------c------------------ccccCChHHHHHHHHHH
Confidence 67889998554 566677777766544321000 0 00001122234456666
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHHHH-----hcCC-----EEEEEecc
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRTSE-----KRGA-----RVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~a~-----~~G~-----~v~~v~~~ 248 (632)
+++.... ...+.|+.++|+|...+++--....|+ +|+. ...||....-.+. ... +.+. .+..++.
T Consensus 94 ~~~p~~~-~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s-~t~~~~~~~~~~~~~~~~~~~~~~- 170 (421)
T PRK06777 94 ALAPIDG-PAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMA-LTGKVAPYKVGFGPFPGSIFHALY- 170 (421)
T ss_pred HhCCCCC-CceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHh-hcCCCcccccCCCCCCCCcEEcCC-
Confidence 7764321 127999999999988765532111344 4654 4567764333321 110 0110 1122222
Q ss_pred CCcc------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccc-cc---hH-HHHHHhhCCcEEEEeccccC-CCC-
Q 006746 249 WPRL------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YP---YL-WMRIAQENDWHILIDACALG-PKD- 315 (632)
Q Consensus 249 ~~~~------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~-~p---l~-i~~~a~~~g~~vlvDaaq~~-g~~- 315 (632)
|+. ..+.+.+++.|.... ....+..|++.-+....|.. .| ++ +.++|+++|+++++|-++.. +..
T Consensus 171 -p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g 248 (421)
T PRK06777 171 -PNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG 248 (421)
T ss_pred -CccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC
Confidence 111 012556777775311 12346777777777788865 55 66 78899999999999998663 221
Q ss_pred -CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchh
Q 006746 316 -MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKS 394 (632)
Q Consensus 316 -m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 394 (632)
+.....-...||++ ++=|.+|. -.-+|++..++++++.+.+...+++ |
T Consensus 249 ~~~~~~~~~~~pDiv--~~sK~l~~-G~pigav~~~~~i~~~~~~~~~~~T----------~------------------ 297 (421)
T PRK06777 249 KLFAMEYYDVKPDLI--TMAKSLGG-GMPISAVVGRAEVMDAPAPGGLGGT----------Y------------------ 297 (421)
T ss_pred chhhhhhcCCCCCEE--eeehhhcC-CCceEEEEEcHHHHhccCCCCCCCC----------C------------------
Confidence 11112123368966 56796651 1227888888877655543211100 0
Q ss_pred hhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHH
Q 006746 395 KQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLI 474 (632)
Q Consensus 395 ~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~ 474 (632)
.+ |.....+. .++|+.+++ +.+.++.+.+.
T Consensus 298 -----~~------------------~p~~~aaa------------------------~a~L~~~~~---~~l~~~~~~~g 327 (421)
T PRK06777 298 -----AG------------------NPLAVAAA------------------------LAVLDVIAE---EKLCQRALILG 327 (421)
T ss_pred -----Cc------------------CHHHHHHH------------------------HHHHHHHHh---ccHHHHHHHHH
Confidence 00 00001111 156666654 56778888999
Q ss_pred HHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccC-CCCccCHH---HHHHHHHhCCcEEccCccCChHHHh
Q 006746 475 NWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDW-KREKIEPV---LVQKLADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 475 ~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~-~G~~i~~~---~V~kla~~~gI~lr~G~~c~~~~~~ 550 (632)
++|.+.|.++.... |.+.-. ..+|.++.+.+.+. .+.. +.+ .+++.+.++||.+..+.
T Consensus 328 ~~l~~~L~~l~~~~----~~i~~v-----rg~G~~~~i~~~~~~~~~~-~~~~~~~l~~~~~~~Gv~i~~~~-------- 389 (421)
T PRK06777 328 AHLVEVLEKAKASC----PAIVDI-----RARGSMVAVEFNDPQTGKP-SPEFTRQYQRQALEEGLLLLSCG-------- 389 (421)
T ss_pred HHHHHHHHHHHHhC----CCeEEe-----cCceEEEEEEEecCccCCc-cHHHHHHHHHHHHhCCeEEeecC--------
Confidence 99999998873211 323211 23567776655432 1111 122 23333445788875320
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
. ...+||+++.+.-|.++|+..++.|.++|.
T Consensus 390 -----------------------------~-~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 390 -----------------------------V-HGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred -----------------------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 0 124899999999999999999999998874
No 314
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=98.87 E-value=6.7e-09 Score=108.74 Aligned_cols=177 Identities=15% Similarity=0.171 Sum_probs=121.4
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVM 243 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~ 243 (632)
||. ....++++++|+++||.+ ..+|++++|.|..+++..+. ++++.|+....-|-..... ...+.-.|+++.
T Consensus 25 Yg~--D~~~~~l~~~i~~l~g~e----~a~f~~sGT~An~~al~~~~-~~~~~vi~~~~aHi~~~E~-ga~~~~~G~~~~ 96 (290)
T PF01212_consen 25 YGE--DPTTARLEERIAELFGKE----AALFVPSGTMANQLALRAHL-RPGESVICADTAHIHFDET-GAIEELSGAKLI 96 (290)
T ss_dssp TTS--SHHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHHH-HTTEEEEEETTEHHHHSST-THHHHHTTCEEE
T ss_pred cCC--ChhHHHHHHHHHHHcCCC----EEEEeCCCChHHHHHHHHHH-hcCCceeccccceeeeecc-chhhHhcCcEEE
Confidence 554 367789999999999986 45799999999999999985 7888877553322111111 112244799998
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-ccccchH----HHHHHhhCCcEEEEeccccC------
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYPYL----WMRIAQENDWHILIDACALG------ 312 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~pl~----i~~~a~~~g~~vlvDaaq~~------ 312 (632)
.++.+ ..+.+++++|++.+.....-..++++|+++..++.. |+.++++ |.+.||++|+.+++|+|=++
T Consensus 97 ~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~ 175 (290)
T PF01212_consen 97 PLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAAL 175 (290)
T ss_dssp EEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHH
T ss_pred ECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcc
Confidence 88774 338999999999998743222468999999887764 8888776 45679999999999997332
Q ss_pred CCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCc
Q 006746 313 PKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTV 354 (632)
Q Consensus 313 g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~ 354 (632)
+. ..-++. -.+|.+.+|++|-+|. | +=++|..+++.+
T Consensus 176 ~~--~~~e~~-~~~D~v~~~~tK~~g~-~-~Gavl~~~~~~i 212 (290)
T PF01212_consen 176 GV--SLAEIA-AGADSVSFGGTKNGGA-P-GGAVLAGNKEFI 212 (290)
T ss_dssp HH--HHHHHH-TTSSEEEEETTSTT-S-S-SEEEEEESHHHH
T ss_pred cc--cHHHHh-hhCCEEEEEEEccccc-c-cceEEEechHHH
Confidence 22 111111 4689999999998885 4 567777777744
No 315
>PLN02368 alanine transaminase
Probab=98.86 E-value=5.4e-07 Score=99.00 Aligned_cols=169 Identities=12% Similarity=0.064 Sum_probs=115.1
Q ss_pred HHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ | ++++ +|++|+|+++|+.+++..+-..+||+|++. -.|+. + ...++..|++++.++
T Consensus 111 ~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~--y---~~~~~~~g~~~v~v~ 183 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSDPE--LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPL--Y---SATISLLGGTLVPYY 183 (407)
T ss_pred HHHHHHHHHHHHhcCCCCChh--hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCcc--H---HHHHHHcCCEEEEEe
Confidence 5677777776 6 4444 799999999999999998833689997754 35543 2 334567899999998
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEeccc--cC--CC-CC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACA--LG--PK-DM 316 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq--~~--g~-~m 316 (632)
++.. +..++.++|++.+++...+..+++++.++.-+|+||..++.+ + +++|+++|++++.|-+- +. +. ..
T Consensus 184 ~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~ 263 (407)
T PLN02368 184 LEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPF 263 (407)
T ss_pred cccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCc
Confidence 8632 346899999999874211112468888888899999999876 4 56789999999999852 11 21 00
Q ss_pred CCC-----CCC----CCCCcEEEEcccccc-CCCCCceEEEEE
Q 006746 317 DSF-----GLS----LVRPDFLICSFYQIF-GENPSGFGCLFV 349 (632)
Q Consensus 317 ~~l-----dls----~~~~Df~~~S~hK~~-G~~P~G~G~L~V 349 (632)
.++ ++. ....=+++.|+-|.| |.+---+|++++
T Consensus 264 ~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~ 306 (407)
T PLN02368 264 ISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEM 306 (407)
T ss_pred ccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEE
Confidence 110 110 011236778999976 753334587774
No 316
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.84 E-value=4.1e-07 Score=102.44 Aligned_cols=151 Identities=13% Similarity=0.157 Sum_probs=100.8
Q ss_pred CccEEEeCCHHHHHHHHHhhC----CCCCCCeEEEec-cccchhhHHHHHHHHhc--CCEEEEEeccC-CccccCHHHHH
Q 006746 189 DYGMVFTANRTSAFKLLAESY----PFMSVKNLLTVY-DYESEAVEAMIRTSEKR--GARVMSAEFSW-PRLRINSEKLR 260 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl----~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~--G~~v~~v~~~~-~~~~i~~~~l~ 260 (632)
+.+|+.|+|+++||..+..++ -..+||+|++.. .|+. + ...++.. |++++.++.+. .+..++.++|+
T Consensus 161 ~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~--Y---~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~ 235 (527)
T PRK09275 161 EFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTP--Y---LEIPELPRYDLEVVHINADEENEWQYPDSELE 235 (527)
T ss_pred cCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHH--H---HHHHHHcCCCeEEEEeecCcccCCCCCHHHHH
Confidence 347999999999999998873 268999987654 3332 2 2233334 45555555442 23568889998
Q ss_pred HHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhh--CCcEEEEeccc--cCCCCCCCCCCCCC-CCcEEEE
Q 006746 261 KMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQE--NDWHILIDACA--LGPKDMDSFGLSLV-RPDFLIC 331 (632)
Q Consensus 261 ~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~--~g~~vlvDaaq--~~g~~m~~ldls~~-~~Df~~~ 331 (632)
++++++ ++++.+..-+|+||..++ ++ |+++|++ +++++|.|-+- +.+.- .++ ++.. .--+++.
T Consensus 236 ~~~~~~------tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~-~s~-~~~~~~~~I~v~ 307 (527)
T PRK09275 236 KLRDPS------IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDF-RSL-FAVLPYNTILVY 307 (527)
T ss_pred hhcCCC------CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccc-cCH-HHhCCCCEEEEe
Confidence 877654 488888889999999999 44 5677854 59999999863 22210 111 1111 1247888
Q ss_pred ccccccCCCCCceEEEEEeCC
Q 006746 332 SFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 332 S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
|+-|.||++---+|+++..++
T Consensus 308 SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 308 SFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred ehhhhccCcHhHHhhhhcCch
Confidence 999999963233598888775
No 317
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.84 E-value=1.5e-06 Score=96.18 Aligned_cols=347 Identities=11% Similarity=0.105 Sum_probs=191.1
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..+. |--.+.+++++.+.++... . . .. +....+...+.-++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~--------~---~-------~~------~~~~~~~~~~la~~L~ 96 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS--------H---V-------MF------GGITHPPAIELCRKLV 96 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcC--------C---c-------cc------cccCCHHHHHHHHHHH
Confidence 67889998653 4556777777665443210 0 0 00 0001233345666677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C----CCC-CeEE-EeccccchhhHHHHHH----HHh--cC---CEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F----MSV-KNLL-TVYDYESEAVEAMIRT----SEK--RG---ARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~----~~g-d~il-t~~d~~s~~v~~~~~~----a~~--~G---~~v~~ 244 (632)
+++..+ -..+.|+.++|+|...+.+--. + ..| .+|+ ....||......+.-. ..+ .+ -.+..
T Consensus 97 ~~~p~~--~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~ 174 (428)
T PRK07986 97 AMTPQP--LECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLF 174 (428)
T ss_pred hhCCCC--cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEE
Confidence 766432 1379999999998887655321 1 123 3465 4456776333222100 000 00 11223
Q ss_pred EeccCCcc-----ccCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-
Q 006746 245 AEFSWPRL-----RINSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYP----YL-WMRIAQENDWHILIDACALG- 312 (632)
Q Consensus 245 v~~~~~~~-----~i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~- 312 (632)
++...... .-+.+++++.|... ...+..|++-- ++...|.+.| ++ +.++|+++|+++++|-+|.+
T Consensus 175 ~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~ 251 (428)
T PRK07986 175 APAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGF 251 (428)
T ss_pred ECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 33210000 12456777777532 23456677755 3666776543 66 78899999999999998753
Q ss_pred CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccc
Q 006746 313 PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 313 g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
|.. +-..+.....||+++ +=|.+|..---+|++.+++++++.+.+...+ . +.
T Consensus 252 GrtG~~fa~~~~gv~PDi~t--~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~-~---------~~-------------- 305 (428)
T PRK07986 252 GRTGKLFACEHAGIAPDILC--LGKALTGGTMTLSATLTTREVAETISNGEAG-C---------FM-------------- 305 (428)
T ss_pred ccCCCeeeecccCCCCCEEE--echhhhCCcccCcchhchHHHHHHhhcCCCC-c---------cc--------------
Confidence 221 111122334689886 5685442101257777777776555331000 0 00
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 470 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~ 470 (632)
..+| |.+ |.....+. .+.|+.+.+. .+.+|+
T Consensus 306 --------~~~T--~~g------------~p~~~aaa------------------------~a~L~~i~~~---~~~~~~ 336 (428)
T PRK07986 306 --------HGPT--FMG------------NPLACAVA------------------------NASLSLLESG---DWQQQV 336 (428)
T ss_pred --------cCCC--CCc------------CHHHHHHH------------------------HHHHHHHHhC---CHHHHH
Confidence 0111 110 10111111 2567777654 457888
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHh
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~ 550 (632)
+.+.++|.+.|.++.- .|.| +. . .-+|.++++.+.+. .....+.+.+.++||.++..
T Consensus 337 ~~~g~~l~~~l~~l~~-----~~~i---~~-v-Rg~Gl~~~ve~~~~----~~~~~~~~~l~~~Gl~~~~~--------- 393 (428)
T PRK07986 337 AAIEAQLREELAPLRD-----APMV---AD-V-RVLGAIGVVETTRP----VNMAALQRFFVEQGVWIRPF--------- 393 (428)
T ss_pred HHHHHHHHHHHHHHhc-----CCCE---Ee-E-eccceEEEEEeCCc----ccHHHHHHHHHHCCcEEEec---------
Confidence 8999999999988731 1333 11 1 23577888877653 13445666666778877521
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ .+||+++.+..|.|||+++++.|.+.|+.
T Consensus 394 -------------------------------g-~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 394 -------------------------------G-KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred -------------------------------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 38999999999999999999999987755
No 318
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.82 E-value=8.1e-07 Score=98.24 Aligned_cols=211 Identities=12% Similarity=0.137 Sum_probs=123.3
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |.-++.+++++.+.+... + . ++. ......+..++++
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~----~----------------~------~~~-~~~~~~~la~~L~ 100 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG----L----------------S------FGA-PTELEVELAELVI 100 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC----C----------------c------CCC-CCHHHHHHHHHHH
Confidence 56789998653 456677787766544321 0 0 000 1133346777777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCCCCeEE-EeccccchhhHHHHHHHH----h------cCCEE----EE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PFMSVKNLL-TVYDYESEAVEAMIRTSE----K------RGARV----MS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~gd~il-t~~d~~s~~v~~~~~~a~----~------~G~~v----~~ 244 (632)
+++.- .+ .|.||.++++|+..+.... .+..+++|+ ....||.. ..+...... . .+... ..
T Consensus 101 ~~~~~-~~--~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (426)
T PRK00062 101 ELVPS-IE--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGH-ADSLLVKAGSGAATLGLPDSPGVPEDFAKHT 176 (426)
T ss_pred HhCCC-CC--EEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCc-hhhhhhccCccccccCCCCCCCCCcccccce
Confidence 77631 22 6999999999999887753 223345565 45567752 222211100 0 01100 01
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccCC-C-CCC
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALGP-K-DMD 317 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~g-~-~m~ 317 (632)
..+ +. .+.+++++.+... ..++..|++..+...+|...| ++ +.++|+++|+++++|-++.+- . .+.
T Consensus 177 ~~~--~~--~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~ 249 (426)
T PRK00062 177 LTA--PY--NDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGG 249 (426)
T ss_pred EEc--CC--CCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCcc
Confidence 111 11 2678888888642 235678888877777999999 88 899999999999999987631 1 011
Q ss_pred CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
..+.-...||++ ++-|.+|. -.-+|++..++++++.+.
T Consensus 250 ~~~~~~~~pDi~--~~gK~l~~-G~p~ga~~~~~~i~~~~~ 287 (426)
T PRK00062 250 AQGYYGVTPDLT--TLGKIIGG-GLPVGAFGGRREIMEQLA 287 (426)
T ss_pred HHHHhCCCcchH--hhhhHhhC-CCcceeeeEHHHHHHhhc
Confidence 111112357864 55696662 112688888877766553
No 319
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.82 E-value=3.5e-06 Score=93.04 Aligned_cols=351 Identities=13% Similarity=0.088 Sum_probs=192.4
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..++ |--.+.+++++.+.+..... .. . +....+...+.-+++.
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~------~~------------~------~~~~~~~~~~la~~l~ 93 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTH------TA------------Y------QIVPYESYVTLAEKIN 93 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccC------cc------------c------CccCCHHHHHHHHHHH
Confidence 67889998654 56667777776654432100 00 0 0001122234455566
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEE-EeccccchhhHHHHHH----HHhcCC-----EEEEEeccC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLL-TVYDYESEAVEAMIRT----SEKRGA-----RVMSAEFSW 249 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~il-t~~d~~s~~v~~~~~~----a~~~G~-----~v~~v~~~~ 249 (632)
+++... ....+.|+.++|+|+..+.+--..-.|+ +|+ ....||......|.-. ..+.+. .+..+|+..
T Consensus 94 ~~~p~~-~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~ 172 (421)
T PRK09792 94 ALAPVS-GQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPS 172 (421)
T ss_pred HhCCCC-CCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCc
Confidence 665422 1237999999999888765432211344 465 4456776433332110 011111 133344421
Q ss_pred Ccccc----CHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc-c---hH-HHHHHhhCCcEEEEeccccC-CCC--CC
Q 006746 250 PRLRI----NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-P---YL-WMRIAQENDWHILIDACALG-PKD--MD 317 (632)
Q Consensus 250 ~~~~i----~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~-p---l~-i~~~a~~~g~~vlvDaaq~~-g~~--m~ 317 (632)
....+ +.+.+++.+.... ...++..|.+.-+.+.+|... | ++ +.++|+++|+++++|-++.. +.. +.
T Consensus 173 ~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~ 251 (421)
T PRK09792 173 DLHGISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLF 251 (421)
T ss_pred ccccccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh
Confidence 11111 2367777776310 123577888888889999876 6 66 78899999999999997663 221 11
Q ss_pred CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhh
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE 397 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e 397 (632)
.+.--...||+ .++-|.+|. ---+|+++.+++.++.+.+...++
T Consensus 252 a~~~~~~~pDi--~t~gK~l~~-G~pigav~~~~~i~~~~~~~~~~~--------------------------------- 295 (421)
T PRK09792 252 AMDHYADKPDL--MTMAKSLAG-GMPLSGVVGNANIMDAPAPGGLGG--------------------------------- 295 (421)
T ss_pred HHHhcCCCCcE--EEeehhhcC-CCceEEEEEcHHHHhccCCCCcCC---------------------------------
Confidence 11111236895 566795551 123788888887765553211110
Q ss_pred hhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHH
Q 006746 398 KVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWL 477 (632)
Q Consensus 398 ~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L 477 (632)
| |. | |.....+. .+.|+++.+ +.+.+|++.+.+++
T Consensus 296 ----T--~~----------g--npl~~aaa------------------------~a~l~~l~~---~~~~~~~~~~g~~l 330 (421)
T PRK09792 296 ----T--YA----------G--NPLAVAAA------------------------HAVLNIIDK---ESLCERANQLGQRL 330 (421)
T ss_pred ----C--CC----------C--CHHHHHHH------------------------HHHHHHHHh---hhHHHHHHHHHHHH
Confidence 0 00 0 00000111 145666654 35677888899999
Q ss_pred HHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC-CCc--cCHHHHHHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 478 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK-REK--IEPVLVQKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 478 ~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~-G~~--i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
.+.|.++.... |.+ ..+ .-+|.++.+.+.+.+ +.. .....+.+.+-++||.+...
T Consensus 331 ~~~l~~l~~~~----p~v--~~v---rG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~------------- 388 (421)
T PRK09792 331 KNTLIDAKESV----PAI--AAV---RGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC------------- 388 (421)
T ss_pred HHHHHHHHHhC----CCc--cee---cccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec-------------
Confidence 88888773211 322 111 234667777776421 111 11233444445578887410
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+....+||+.+.+..+.+||+++++.+.+.|.
T Consensus 389 -------------------------g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 389 -------------------------GAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred -------------------------CCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 01135899999999999999999999988763
No 320
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.80 E-value=6.4e-06 Score=91.11 Aligned_cols=351 Identities=10% Similarity=0.022 Sum_probs=189.5
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+.+++.+.+..... + .. +....+...+.-+++.
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-----------~------~~-------~~~~~~~~~~la~~l~ 93 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH-----------T------CH-------QVVPYENYVRLAERLN 93 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccC-----------c------cc-------CccCCHHHHHHHHHHH
Confidence 57889997554 66677788887654432100 0 00 0001233345566677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEE-eccccchhhHHHHH----HHHhcC-----CEEEEEeccC
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLT-VYDYESEAVEAMIR----TSEKRG-----ARVMSAEFSW 249 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt-~~d~~s~~v~~~~~----~a~~~G-----~~v~~v~~~~ 249 (632)
+++.-.. ...|.|++++|+|...+++--. +....+|++ ...||......+.- ...+.+ ..+..+|+..
T Consensus 94 ~~~p~~~-~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (425)
T PRK07495 94 ALVPGDF-AKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPV 172 (425)
T ss_pred HhCCCCC-CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCc
Confidence 7664221 1269999999998887654321 222334664 45677643333210 001111 1344555531
Q ss_pred CccccC----HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--CC
Q 006746 250 PRLRIN----SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--MD 317 (632)
Q Consensus 250 ~~~~i~----~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m~ 317 (632)
....++ .+++++.+.... ....+..|.+.-+...+|...| ++ +.++|+++|+++++|-++.. |.. +.
T Consensus 173 ~~~g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~ 251 (425)
T PRK07495 173 ELHGVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF 251 (425)
T ss_pred ccccccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce
Confidence 111122 344566664311 1234556655555545886643 44 67889999999999998663 221 11
Q ss_pred CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhh
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE 397 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e 397 (632)
..+.....||+++ +=|.+|. ..-+|++..+++.++.+.+...+++ |
T Consensus 252 a~~~~gv~pDi~t--lsK~l~~-G~pigav~~~~~i~~~~~~~~~~~T----------~--------------------- 297 (425)
T PRK07495 252 AMEHHEVAADLTT--MAKGLAG-GFPLAAVTGRAEIMDAPGPGGLGGT----------Y--------------------- 297 (425)
T ss_pred eecccCCCCCEEe--ehhhhcC-CccceEEEEcHHHHhccCCCCcCCC----------C---------------------
Confidence 1222224577654 4685551 1127888888877655543111100 0
Q ss_pred hhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHH
Q 006746 398 KVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWL 477 (632)
Q Consensus 398 ~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L 477 (632)
.+ |.....+. .++|+++.+ +.+.+|++.+.++|
T Consensus 298 --~~------------------~pl~~aaa------------------------~a~l~~l~~---~~l~~~~~~~g~~l 330 (425)
T PRK07495 298 --GG------------------NPLGIAAA------------------------HAVLDVIEE---EDLCERANQLGNRL 330 (425)
T ss_pred --CC------------------CHHHHHHH------------------------HHHHHHHHh---chHHHHHHHHHHHH
Confidence 00 00001111 156777754 35778888899999
Q ss_pred HHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCCCccC---HHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 478 VNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKIE---PVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 478 ~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G~~i~---~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
.+.|+++.... |.+ .|- .+|-.+.+.+.+.+...-+ ...+.+.+-++|+.++..
T Consensus 331 ~~~L~~l~~~~----~~i~~vr------G~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------------ 388 (425)
T PRK07495 331 KQRLASLRETV----PEIADIR------GPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC------------ 388 (425)
T ss_pred HHHHHHHHhhC----CCeeeee------cCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec------------
Confidence 99988874211 322 221 2366667766543210001 223445555678887531
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+....+||+.+-+..|.+||+.+++.|.+.|.+
T Consensus 389 --------------------------g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 389 --------------------------GVHGNVIRFLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred --------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 011258999999999999999999999987753
No 321
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.79 E-value=6.9e-06 Score=90.68 Aligned_cols=350 Identities=11% Similarity=0.048 Sum_probs=190.5
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..++ |--.+.+++++.+.+..... .. . .....+...+.-++++
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~------~~------------~------~~~~~~~~~~la~~l~ 86 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTH------TC------------F------MVTPYEGYVALAEKLN 86 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccC------cc------------c------cccCChHHHHHHHHHH
Confidence 57889997554 56667788876654432100 00 0 0001122235555676
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEE-EeccccchhhHHHHHHH-----HhcCC-----EEEEEecc
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLL-TVYDYESEAVEAMIRTS-----EKRGA-----RVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~il-t~~d~~s~~v~~~~~~a-----~~~G~-----~v~~v~~~ 248 (632)
+++... ....|.|+.++|+|...+.+--..-.|+ +|+ ....||......| ... .+.|. .+..++..
T Consensus 87 ~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (420)
T TIGR00700 87 RIAPGS-GPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTM-ALTAKVMPYKSGFGPFAPEVYRAPLP 164 (420)
T ss_pred HhCCCC-CCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHH-HhcCCCcccccCCCCCCCCcEEeCCC
Confidence 766321 1127999999999888765432111343 465 4457886433333 211 11121 23334331
Q ss_pred CCcc------cc----CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-
Q 006746 249 WPRL------RI----NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG- 312 (632)
Q Consensus 249 ~~~~------~i----~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~- 312 (632)
.+.. .. +.+.+++.|.... ....+..|++.-+...+|...| ++ +.++|+++|+++++|-++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~ 243 (420)
T TIGR00700 165 YPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGF 243 (420)
T ss_pred ccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 0000 01 1345666653211 1245788888888888999888 77 88999999999999997653
Q ss_pred CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccc
Q 006746 313 PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 313 g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
+.. +..++-....||+++ +=|.+|. ---+|++++++++++.+.+...+
T Consensus 244 gr~g~~~a~~~~~~~pDi~~--lsK~l~~-G~pig~v~~~~~i~~~~~~~~~~--------------------------- 293 (420)
T TIGR00700 244 ARTGAMFACEHEGPEPDLIT--TAKSLAD-GLPLSGVTGRAEIMDAPAPGGLG--------------------------- 293 (420)
T ss_pred cccchhHHHhhcCCCCCEEE--eeccccC-CcceEEEEecHHHHhhcCCCCcC---------------------------
Confidence 221 112222234689655 6795551 22378899888776555331111
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 470 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~ 470 (632)
+|... .+++ ...+ .++|+.+.+ +.+.+|.
T Consensus 294 ----------~T~~~-~pl~------------~aaa-------------------------~a~l~~l~~---~~~~~~~ 322 (420)
T TIGR00700 294 ----------GTYAG-NPLA------------CAAA-------------------------LAVLAIIES---EGLIERA 322 (420)
T ss_pred ----------CCCCc-CHHH------------HHHH-------------------------HHHHHHHHh---ccHHHHH
Confidence 00000 0000 0011 145666654 3466777
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCH---HHHHHHHHhCCcEEccCccCChH
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEP---VLVQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~---~~V~kla~~~gI~lr~G~~c~~~ 547 (632)
+.+.+.|.+.|.++.-. .|.+.-. ..+|.++.+.+.+.+...-+. ..+.+.+.++||.+..|.
T Consensus 323 ~~~g~~l~~~L~~l~~~----~~~~~~v-----rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~----- 388 (420)
T TIGR00700 323 RQIGRLVTDRLTTLKAV----DPRIGDV-----RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCG----- 388 (420)
T ss_pred HHHHHHHHHHHHHHHhh----CCCEEEe-----eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccC-----
Confidence 88888888888776211 1322111 124677777664321100011 223333356788875430
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
. -..+||+++.+..|.+||+..++.|.++|.
T Consensus 389 --------------------------------~-f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 389 --------------------------------M-FGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred --------------------------------C-CCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 0 125899999998899999999999998874
No 322
>PRK05965 hypothetical protein; Provisional
Probab=98.78 E-value=3.9e-06 Score=93.73 Aligned_cols=355 Identities=15% Similarity=0.091 Sum_probs=192.9
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.++.. + + -.+.| +. ..+...+.-+++.
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~----~--~-~~~~~---------------~~-~~~~~~~lae~L~ 100 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMREL----P--Y-ATGYF---------------HF-GSEPAIRLAAKLA 100 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhc----C--C-ccccc---------------cc-CCHHHHHHHHHHH
Confidence 67889998754 444677888776544321 1 0 00000 00 1233345666676
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEE-EeccccchhhHHHHH-----HHHhcCC---EEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLL-TVYDYESEAVEAMIR-----TSEKRGA---RVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~il-t~~d~~s~~v~~~~~-----~a~~~G~---~v~~ 244 (632)
+++..+ -..|.|+.++|+|...+++--. + ++++ +|+ ....||......+.- ..+..|. .+..
T Consensus 101 ~~~p~~--~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~ 178 (459)
T PRK05965 101 ERAPGS--LNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHK 178 (459)
T ss_pred hhCCCC--cCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEE
Confidence 765322 2269999999999987665321 1 1233 465 455677632211110 0011121 1233
Q ss_pred EeccCCcc---ccC--------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-----HHHHHhhCCcEEEEec
Q 006746 245 AEFSWPRL---RIN--------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-----WMRIAQENDWHILIDA 308 (632)
Q Consensus 245 v~~~~~~~---~i~--------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-----i~~~a~~~g~~vlvDa 308 (632)
++...+.. .-+ .+++++.|.... ...+..|.+.-+....|...|-+ +.++|+++|+++|+|-
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DE 256 (459)
T PRK05965 179 IPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG--ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADE 256 (459)
T ss_pred cCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 43321110 012 256777776421 13466777776777788877543 3567999999999999
Q ss_pred cccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCC-CCceeecccccccccccccCCC
Q 006746 309 CALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTS-SGMVSLLPAKKQLWLTDEFSSC 384 (632)
Q Consensus 309 aq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~-gG~v~~~~~~~~~~~~~~~~~~ 384 (632)
+|.+ |.. |-..+.-...||+++++ |-+|..-.=+|++.+++++++.+.+..- .|.+ +
T Consensus 257 V~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~---------~-------- 317 (459)
T PRK05965 257 VITGFGRTGPLFACEAEGVVPDLMTVA--KGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPV---------G-------- 317 (459)
T ss_pred hhccCccCchhhhHhhcCCCCCeEEec--hhhccCCcceeEEEEcHHHHHHHhccccccccc---------c--------
Confidence 8764 321 11111223479999885 8444210128999999888765432100 0000 0
Q ss_pred CCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHH
Q 006746 385 ETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLT 464 (632)
Q Consensus 385 ~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~ 464 (632)
..+|.. ..+++. ..+ .+.|+.+++ +
T Consensus 318 --------------h~~T~~-gnpl~~------------Aaa-------------------------~a~L~~l~~---~ 342 (459)
T PRK05965 318 --------------HGYTYS-AHPVSA------------AVG-------------------------LEVLRLYHE---G 342 (459)
T ss_pred --------------ccCCCC-CCHHHH------------HHH-------------------------HHHHHHHHh---c
Confidence 011100 001110 111 156666655 3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC--CccC-----HHHHHHHHHhCCcE
Q 006746 465 MISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADRENIS 537 (632)
Q Consensus 465 ~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G--~~i~-----~~~V~kla~~~gI~ 537 (632)
.+.+|++.+.++|.+.|.++. .. |.| +. -.-+|.++.+.+.+... +..+ ...+.+.+.++||.
T Consensus 343 ~l~~~~~~~g~~l~~~l~~l~-~~----~~v---~~--vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll 412 (459)
T PRK05965 343 GLLANGQKAGPRFAAGLDALR-AH----PLV---GD--VRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLV 412 (459)
T ss_pred cHHHHHHHHHHHHHHHHHhhc-cC----CCE---EE--EeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeE
Confidence 567788899999999998873 11 322 11 12356777777653211 1111 22344455567887
Q ss_pred EccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 538 LSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 538 lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
++. .+..+||+++.+..|.+||+++++.+.+.|+.
T Consensus 413 ~~~----------------------------------------~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 413 FRA----------------------------------------FGDGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred EEe----------------------------------------cCCcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 752 12347999999999999999999999998865
No 323
>PLN00144 acetylornithine transaminase
Probab=98.78 E-value=3e-06 Score=92.35 Aligned_cols=288 Identities=14% Similarity=0.126 Sum_probs=165.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CC-------C------CCeEE-EeccccchhhHHHHHHHHh
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FM-------S------VKNLL-TVYDYESEAVEAMIRTSEK 237 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~-------~------gd~il-t~~d~~s~~v~~~~~~a~~ 237 (632)
.+.-+++.+.... + .|.|++++|+|...+.+--. +. + ..+|+ ....||......+. ....
T Consensus 60 ~~la~~l~~~~~~--~--~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s-~~~~ 134 (382)
T PLN00144 60 VELAKRLVASSFA--D--RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALA-LTSK 134 (382)
T ss_pred HHHHHHHHhcCCC--C--eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHh-cCCC
Confidence 3455556665532 2 79999999998887654321 11 0 13465 45577763332221 1000
Q ss_pred cCC---------EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcE
Q 006746 238 RGA---------RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWH 303 (632)
Q Consensus 238 ~G~---------~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~ 303 (632)
... .+..+|. -|++.+++.+... .++.|.+.-+.+..|...| ++ +.++|+++|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~------~d~~~l~~~~~~~-----~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~l 203 (382)
T PLN00144 135 EQYRTPFEPLMPGVTFVEY------GNLEAARKLIQKG-----KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGAL 203 (382)
T ss_pred ccccccCCCCCCCeEEeCC------CCHHHHHHhcCCC-----CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 000 1222222 1578888877432 3556666656777665542 56 78899999999
Q ss_pred EEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccc
Q 006746 304 ILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDE 380 (632)
Q Consensus 304 vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~ 380 (632)
+++|-++.. +.. +...++....|| +.++=|.+|. -.-+|+++++++.++.+.+...+++ |
T Consensus 204 lI~DEv~tg~gr~g~~~~~~~~~~~PD--i~t~sK~l~~-G~pig~v~~~~~~~~~~~~~~~~~T----------~---- 266 (382)
T PLN00144 204 LVFDEVQCGLGRTGYLWAHEAYGVEPD--IMTLAKPLAG-GLPIGAVLVTEKVASAINPGDHGST----------F---- 266 (382)
T ss_pred EEEechhhCCCccchHhhhhhcCCCCC--EEEecccccC-CcceEEEEEcHHHHhccCCCCCCCC----------C----
Confidence 999998653 221 112234456789 5666795541 1237999998887765543211100 0
Q ss_pred cCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHh
Q 006746 381 FSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDS 460 (632)
Q Consensus 381 ~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~ 460 (632)
.+ .+++ ..+. .+.|+++.+
T Consensus 267 -------------------~~-----~pl~-------------~aaa------------------------~a~l~~i~~ 285 (382)
T PLN00144 267 -------------------AG-----GPLV-------------CNAA------------------------LAVLDKISK 285 (382)
T ss_pred -------------------CC-----CHHH-------------HHHH------------------------HHHHHHHhh
Confidence 00 0000 0111 256677754
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEc
Q 006746 461 LGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLS 539 (632)
Q Consensus 461 ~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr 539 (632)
..+.+|++.+.++|++.|.++-... |.+ .+- .+|..+.+.+ ++ +...+.+.+.++||.+.
T Consensus 286 ---~~~~~~~~~~g~~l~~~l~~~~~~~----~~~~~vr------g~G~~~~l~l-~~-----~~~~~~~~~~~~Gv~i~ 346 (382)
T PLN00144 286 ---PGFLASVAKKGEYLRELLRRKLGGN----PHVKEVR------GVGLLVGIQL-DV-----PAGPLVDACRDSGLLVL 346 (382)
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHhhC----CCceeee------cCceEEEEEe-cC-----ccHHHHHHHHHCCeEEe
Confidence 4566778888888877777652111 221 221 2566777666 32 23455566667899886
Q ss_pred cCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 540 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 540 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+ . ...+||+++.+..|.+||+..++.|.+.|..
T Consensus 347 ~~--------------------------------------~-~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 347 TA--------------------------------------G-KGDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred ec--------------------------------------C-CCCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 43 0 1258999999988899999999999988753
No 324
>PRK06105 aminotransferase; Provisional
Probab=98.77 E-value=4.8e-06 Score=92.96 Aligned_cols=353 Identities=12% Similarity=0.150 Sum_probs=194.7
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..+. |--.+.+++++.+.+... | ++ +..+.. ..+...+.-++|+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~----~-------~~-------~~~~~~-----~~~~~~~lae~L~ 102 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKL----P-------FY-------HTFSHK-----SHGPVIDLAEKLV 102 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhC----C-------Ce-------eccccc-----CCHHHHHHHHHHH
Confidence 67889998653 345677778776544321 1 00 000000 1233345667777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEEE-eccccchhhHHHHHHH------HhcC---CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLLT-VYDYESEAVEAMIRTS------EKRG---ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~ilt-~~d~~s~~v~~~~~~a------~~~G---~~v~ 243 (632)
+++..+ -..|.|++++|+|...+.+... + .+++ +|+. ...||......+ .+. +..| ..+.
T Consensus 103 ~~~p~~--~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~-s~t~~~~~~~~~~~~~~~~~ 179 (460)
T PRK06105 103 AMAPVP--MSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASA-SLTGLPNNHRSFDLPLDRIL 179 (460)
T ss_pred HhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhhe-eccCCcccccccCCCCCCCE
Confidence 776432 1269999999999988776521 0 1233 4654 456776433221 110 0111 1122
Q ss_pred EEeccCC-c----c-------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEE
Q 006746 244 SAEFSWP-R----L-------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILI 306 (632)
Q Consensus 244 ~v~~~~~-~----~-------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlv 306 (632)
.++.... . + ..+.+++++.|.... ..++..|++--+....|...| ++ +.++|+++|+++++
T Consensus 180 ~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~ 257 (460)
T PRK06105 180 HTGCPHYYRFGLPGESEEAFATRLANELEALILAEG--PDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVA 257 (460)
T ss_pred EcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcC--CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEE
Confidence 3322100 0 0 012356777775311 235677788777778899888 77 88899999999999
Q ss_pred ecccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCC-CceeecccccccccccccC
Q 006746 307 DACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 307 Daaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~ 382 (632)
|-+|. +|.- +-..+.....||+++++ |.+|..---+|++++++++++.+.+.... |... +
T Consensus 258 DEv~tG~GRtG~~f~~~~~~v~PDi~~~g--K~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~--------h------ 321 (460)
T PRK06105 258 DEVICGFGRTGNMFGCETFGIKPDILVMS--KQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFG--------H------ 321 (460)
T ss_pred eccccCCCcCchhhhHHhcCCCCCeeeee--cccccCcccceEEEEcHHHHHHHhcccccCcccc--------c------
Confidence 99885 3421 11122233479988664 85552100178888888776544331100 0000 0
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
.+|.. ..+++. ..+ .+.|+++++.
T Consensus 322 -----------------~~T~~-gnpl~~------------aaa-------------------------~a~L~~i~~~- 345 (460)
T PRK06105 322 -----------------GFTAS-GHPVAA------------AVA-------------------------LENLAIIEER- 345 (460)
T ss_pred -----------------CCCCC-CCHHHH------------HHH-------------------------HHHHHHHHhc-
Confidence 01100 001110 011 2567777653
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC--CccC-----HHHHHHHHHhCC
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADREN 535 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G--~~i~-----~~~V~kla~~~g 535 (632)
.+.++++.+.++|.+.|.++ ... |.| +. . .-+|-++.+.+.+..+ +..+ ...+.+.+.++|
T Consensus 346 --~l~~~v~~~g~~l~~~L~~l-~~~----~~v---~~-v-rG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~G 413 (460)
T PRK06105 346 --DLVGNAAERGARLQARLRAL-ADH----PLV---GE-V-RGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHG 413 (460)
T ss_pred --cHHHHHHHHHHHHHHHHHHh-hcC----CCe---EE-E-EecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCC
Confidence 56788899999999999887 222 322 11 0 1356777777643221 1111 123444455677
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|.++.. + .+||+++.+..|.+||+++++.+.+.|+.
T Consensus 414 vl~~~~----------------------------------------g-~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 414 VISRAM----------------------------------------G-DTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred eEEEec----------------------------------------C-CEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 776420 1 48999999999999999999999988764
No 325
>PRK07036 hypothetical protein; Provisional
Probab=98.76 E-value=2.2e-06 Score=95.87 Aligned_cols=362 Identities=11% Similarity=0.134 Sum_probs=195.0
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..+. |--.+.+.+++.+.+... + + ... ++....+...+.-+++.
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~----~--~------------~~~-----~~~~~~~~~~~lae~L~ 105 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRL----P--Y------------YTP-----FGDMTNAPAAELAAKLA 105 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhC----c--c------------ccc-----ccccCCHHHHHHHHHHH
Confidence 67889998655 555677777765543221 0 0 000 00001233345666666
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEEE-eccccchhhHHHHHHH----HhcC-----CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLLT-VYDYESEAVEAMIRTS----EKRG-----ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~ilt-~~d~~s~~v~~~~~~a----~~~G-----~~v~ 243 (632)
+++... -..|.|+.|+|+|+..+++--. + .+++ +|+. ...||....-.+ ... .+.+ ..+.
T Consensus 106 ~~~p~~--~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~-s~~~~~~~~~~~~~~~~~~~ 182 (466)
T PRK07036 106 ELAPGD--LNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTA-SLTGKAADRTEFDYASDLVH 182 (466)
T ss_pred HhCCCC--cCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhh-cccCCCcccccccCCCCCcE
Confidence 665322 2269999999998887655321 1 1233 4654 446776322111 110 0001 1233
Q ss_pred EEeccCC----ccc-------cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEe
Q 006746 244 SAEFSWP----RLR-------INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILID 307 (632)
Q Consensus 244 ~v~~~~~----~~~-------i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvD 307 (632)
.++.... .+. ...+.+++.|... ....+..|++.-+....|...| ++ +.++|+++|+++++|
T Consensus 183 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~D 260 (466)
T PRK07036 183 HLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISD 260 (466)
T ss_pred EecCCcccccccCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 4433211 110 0123455555431 1245778888888888899988 77 889999999999999
Q ss_pred ccccC-CCC--CCCCC-CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 308 ACALG-PKD--MDSFG-LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 308 aaq~~-g~~--m~~ld-ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
-+|.+ |.- |.-.. .-...||++++ =|.+|..-.-+|++.++++.++.+.+....|.. +. .
T Consensus 261 EV~tGfGRtG~~~~~~~~~gv~PDivt~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~---------~~-~---- 324 (466)
T PRK07036 261 EVVTGFGRLGHFFASEAVFGIQPDIITF--AKGLTSGYQPLGAVIISERLLDVISGPNAKGNV---------FT-H---- 324 (466)
T ss_pred echhCCCcCchhhhhhhhcCCCCCEEEE--ccccccCccccEEEEEcHHHHHHHhcccCcCcc---------cc-c----
Confidence 98753 321 11111 11346898876 485552100179999998887655431000000 00 0
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCH
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 463 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl 463 (632)
.+|.. ..+++ ..+. .+.|+.+.+
T Consensus 325 ----------------~~T~~-gnpl~-------------~aaa------------------------~a~Le~i~~--- 347 (466)
T PRK07036 325 ----------------GFTYS-GHPVA-------------CAAA------------------------LKNIEIMER--- 347 (466)
T ss_pred ----------------CCCCC-CCHHH-------------HHHH------------------------HHHHHHHHh---
Confidence 01100 00111 1111 155666654
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCC--CccC-----HHHHHHHHHhCC
Q 006746 464 TMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADREN 535 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G--~~i~-----~~~V~kla~~~g 535 (632)
+.+.++++.+.++|.+.|.++.. .|.| .+ .-+|.++.+.+.+..+ +... ...+.+.+.++|
T Consensus 348 ~~l~~~~~~~g~~l~~~L~~l~~-----~~~v~~v------rG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 416 (466)
T PRK07036 348 EGLCEHVREVGPYFEERLASLRE-----LPLVGDV------RGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERG 416 (466)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcc-----CCCEEEE------EeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCC
Confidence 35678888888888888887621 1322 12 2356777777643221 1111 123444455567
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh---
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA--- 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~--- 612 (632)
|.++. .+ .++|+++.+..|.+||+.+++.+.+.|+.
T Consensus 417 vl~~~----------------------------------------~~-~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 417 LLVRP----------------------------------------LE-HLCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred cEEee----------------------------------------cC-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 76641 11 47899999999999999999999877754
Q ss_pred cccccccce
Q 006746 613 DFVEKARWR 621 (632)
Q Consensus 613 ~f~~~~~~~ 621 (632)
.+..+..||
T Consensus 456 ~~~~~~~~~ 464 (466)
T PRK07036 456 ELAAHGLWR 464 (466)
T ss_pred HHHhccccC
Confidence 233455776
No 326
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.75 E-value=3.7e-09 Score=111.74 Aligned_cols=173 Identities=14% Similarity=0.151 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHH--HHHHHHhcCCEEEEEec
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEA--MIRTSEKRGARVMSAEF 247 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~--~~~~a~~~G~~v~~v~~ 247 (632)
.-+..+.+.++.+.||. ..+.++|...|+-+++..+ -+|.+|+++..+--+.-.. +-+..+..|++++.|-.
T Consensus 47 ~R~~~v~~ll~~ltgAe----aA~VvNnnaAAv~L~l~~l--a~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGt 120 (367)
T PF03841_consen 47 SRYAHVEELLCELTGAE----AALVVNNNAAAVLLALNTL--AKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGT 120 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccc----ccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc
Confidence 33456778889999995 2455788888888888887 4577776554433221111 22444567999888764
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC--cc--ccchH-HHHHHhhCCcEEEEecccc---------CC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT--GA--RYPYL-WMRIAQENDWHILIDACAL---------GP 313 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T--G~--~~pl~-i~~~a~~~g~~vlvDaaq~---------~g 313 (632)
. .+...+|++++|+++| .++..-|.||+. |. ..|++ ++++||++|+++++|+++. .|
T Consensus 121 t---N~t~~~Dye~AI~e~T------a~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~ 191 (367)
T PF03841_consen 121 T---NRTHLSDYEKAITENT------AALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLP 191 (367)
T ss_dssp -------------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT---
T ss_pred c---cccccccccccccccc------cccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCc
Confidence 3 3467899999999876 788888888874 32 35788 9999999999999999871 22
Q ss_pred CCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 314 KDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 314 ~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
....--+.-+.++|.++||+-|++|. |. .|++.-|++.+++++.
T Consensus 192 ~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQ-aGiI~Gkk~lI~~lk~ 235 (367)
T PF03841_consen 192 DEPTVQEYLAAGADLVTFSGDKLLGG-PQ-AGIIVGKKELIEKLKK 235 (367)
T ss_dssp -------CCCCT-SEEEEETTSSSSS--S--EEEEEEHHHHHHHHH
T ss_pred cccHHHHHhhcCCCEEEEECCCcCCC-CC-eEEEEeCHHHHHHHhh
Confidence 21001122346899999999998886 86 6999999999987754
No 327
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.75 E-value=2.5e-06 Score=94.44 Aligned_cols=214 Identities=15% Similarity=0.195 Sum_probs=120.6
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|+|..+. |--.+.+.+++.+.+... + .+ + ...+...+.-+++.
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~----~-------~~---------------~-~~~~~~~~la~~L~ 103 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERG----T-------SY---------------G-LTSEQEILFAEELF 103 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhC----C-------CC---------------C-CCCHHHHHHHHHHH
Confidence 57889999654 555677777765543221 0 00 0 01223345666666
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHH-HHHHHHh-cCC-EE-EEEeccC--Cc-
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEA-MIRTSEK-RGA-RV-MSAEFSW--PR- 251 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~-~~~~a~~-~G~-~v-~~v~~~~--~~- 251 (632)
+.+... ...|.|+.++|+|...+.+--..-.|+ +|++ ...||. ...| +...+.. ... .. ....... +.
T Consensus 104 ~~~~~~--~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG-~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (433)
T PRK00615 104 SYLGLE--DHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHG-HADTLLQGISFSETSLDTLTHLVDTDLAHPLT 180 (433)
T ss_pred HhCCCC--cCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCC-CCcccCcccccCCCCcCcCCCCCCCCCCCCCe
Confidence 776432 137999999999988765533212354 4654 446775 2222 1111100 000 00 0000000 00
Q ss_pred c---ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch----H-HHHHHhhCCcEEEEeccccC---CCCCCCCC
Q 006746 252 L---RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY----L-WMRIAQENDWHILIDACALG---PKDMDSFG 320 (632)
Q Consensus 252 ~---~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl----~-i~~~a~~~g~~vlvDaaq~~---g~~m~~ld 320 (632)
. .-+.+++++.|.... ..+..|++.-+....|...|. + +.++|+++|+++++|-+|.+ |. +....
T Consensus 181 ~~~~~~d~~~l~~~l~~~~---~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~-~ga~~ 256 (433)
T PRK00615 181 LSLPYNDFQIFQTVMNSLG---HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQ-GGAAA 256 (433)
T ss_pred EeCCCCCHHHHHHHHHhcC---CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccH-hHHHH
Confidence 0 125788888886432 346788888888888998874 4 77899999999999998842 21 11111
Q ss_pred CCCCCCcEEEEccccccCC-CCCceEEEEEeCCCccccC
Q 006746 321 LSLVRPDFLICSFYQIFGE-NPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~-~P~G~G~L~Vr~~~~~~L~ 358 (632)
.-...||+++ +=|.+|. .| +|++..+++.++.+.
T Consensus 257 ~~gv~PDi~~--~gK~lggG~p--~~av~~~~~i~~~~~ 291 (433)
T PRK00615 257 IYHVKPDITV--YGKILGGGLP--AAAVVAHKSIMDHLA 291 (433)
T ss_pred hcCCCCCeEE--EcccccCCcc--eeeeeecHHHHhhhc
Confidence 1123789876 5686652 12 788888888776553
No 328
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.75 E-value=1.1e-06 Score=95.86 Aligned_cols=170 Identities=12% Similarity=0.075 Sum_probs=99.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC--CeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSV--KNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g--d~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
-+.+-+....|+++.|.+.. ..-+-.++|.+...+.-+.....+ ++|+++. -|+. ....+...++-.|++++.+
T Consensus 109 Lq~lfe~Qs~i~eLTGmdva--NaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~-~~~v~~t~a~~~g~~iv~~ 185 (429)
T PF02347_consen 109 LQALFEYQSMICELTGMDVA--NASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQ-TRAVLRTYAAPLGIEIVEV 185 (429)
T ss_dssp HHHHHHHHHHHHHHHTSSEE---SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CH-HHHHHHHHCCHCCEEEEEE
T ss_pred HHHHHHHHHHHHHhhCCCcc--CCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChh-hHHHHHHhhhhCCeEEEEe
Confidence 35666899999999998732 123344666665555444333333 4676655 4554 4555666777789999999
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecc---ccCCCCCCCCCC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDAC---ALGPKDMDSFGL 321 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaa---q~~g~~m~~ldl 321 (632)
+.+ +.+..+ ++ .+..|.++.. |..|..-+++ |++++|++|.++++ ++ ++++.. .|
T Consensus 186 ~~~-~~~~~d--------~~------~~a~v~vq~P-n~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~-~P--- 244 (429)
T PF02347_consen 186 PLD-EDGTTD--------DD------DTAAVMVQNP-NTFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLK-SP--- 244 (429)
T ss_dssp -BB-TTCSB---------ST------TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC---G---
T ss_pred ccc-ccCCcc--------cc------CeEEEEeecC-CCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcC-Ch---
Confidence 887 444444 22 3455666655 5799999999 99999999999887 44 333221 12
Q ss_pred CCCCCcEEEEccccccCC----CCCceEEEEEeCCCccccCCCCCC
Q 006746 322 SLVRPDFLICSFYQIFGE----NPSGFGCLFVKKSTVPILVDNTSS 363 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~----~P~G~G~L~Vr~~~~~~L~~~~~g 363 (632)
.++++|+++.. ||-||. ..+|+|++-+|++....+.-+..|
T Consensus 245 ge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG 289 (429)
T PF02347_consen 245 GEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVG 289 (429)
T ss_dssp GGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEE
T ss_pred hhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceec
Confidence 45789999666 775543 123789999999977666554443
No 329
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.75 E-value=6.2e-06 Score=91.72 Aligned_cols=309 Identities=11% Similarity=0.092 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEE-EeccccchhhHHHHHHHH-----hc--C--
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLL-TVYDYESEAVEAMIRTSE-----KR--G-- 239 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~il-t~~d~~s~~v~~~~~~a~-----~~--G-- 239 (632)
...+.-+++++++.... ...|.|++++|+|...+++--..-.|+ +|+ ....||......+ .... +. +
T Consensus 86 ~~~~lae~L~~~~p~~~-~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~al-s~s~~~~~~~~~~~~~ 163 (445)
T PRK08593 86 PLVRLAKKLCELAPGDF-EKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSL-SMSGISLNMRRKYGPL 163 (445)
T ss_pred HHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHH-hhcCCCcccccCCCCC
Confidence 33466677777764321 127999999999988766532111344 455 4456776333222 1110 01 1
Q ss_pred -CEEEEEeccCCc----cccC-------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCc
Q 006746 240 -ARVMSAEFSWPR----LRIN-------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDW 302 (632)
Q Consensus 240 -~~v~~v~~~~~~----~~i~-------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~ 302 (632)
..+..+|..... ...+ .+++++.+.... ....+..|++--+....|...| ++ +.++|+++|+
T Consensus 164 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~ 242 (445)
T PRK08593 164 LPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGI 242 (445)
T ss_pred CCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 123344432110 0011 133444443210 0235678888888888899888 77 8899999999
Q ss_pred EEEEecccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccccccccc
Q 006746 303 HILIDACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTD 379 (632)
Q Consensus 303 ~vlvDaaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~ 379 (632)
++++|-++. +|.. +...+.-...||+++ +=|.+|. -.-+|++..+++.++.+.+...+
T Consensus 243 llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t--~gK~l~~-G~p~gav~~~~~i~~~~~~~~~~---------------- 303 (445)
T PRK08593 243 LFAVDDIQQGLGRTGKWSSISHFNITPDLMS--FGKSLAG-GMPMSAIVGRKEIMESLEAPAHL---------------- 303 (445)
T ss_pred EEEEechhhCCCcCchHHHHHhcCCCCCEee--ecccccC-CcccEEEEEcHHHHhhhccCCCC----------------
Confidence 999999874 3321 101111123689775 4585542 11278888888876555321100
Q ss_pred ccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHH
Q 006746 380 EFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD 459 (632)
Q Consensus 380 ~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~ 459 (632)
.| | .|+| ....+. .+.|+.+.
T Consensus 304 ---------------------~T--~----------~~~p--l~~aaa------------------------~a~l~~l~ 324 (445)
T PRK08593 304 ---------------------FT--T----------GANP--VSCAAA------------------------LATIDMIE 324 (445)
T ss_pred ---------------------CC--C----------CCCH--HHHHHH------------------------HHHHHHHH
Confidence 00 0 0000 001111 15666665
Q ss_pred hhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCcc-CH---HHHHHHHHhCC
Q 006746 460 SLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKI-EP---VLVQKLADREN 535 (632)
Q Consensus 460 ~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i-~~---~~V~kla~~~g 535 (632)
+ +.+.+|++.+.++|.+.|.++.... |.| +.- .-+|.++.+.+.+...... +. ..+.+.+.++|
T Consensus 325 ~---~~l~~~~~~~g~~l~~~L~~l~~~~----~~v---~~v--rG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~G 392 (445)
T PRK08593 325 D---ESLLQRSAEKGEYARKRFDQWVSKY----NFV---GDV--RGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHG 392 (445)
T ss_pred h---ccHHHHHHHHHHHHHHHHHHHHhcC----CcE---EEE--eccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCC
Confidence 4 3567888889999999988773211 322 110 1245566665543111111 11 22333334567
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|.+.. .+..++|+++.+..|.+||+++++.+.+.++.
T Consensus 393 v~~~~----------------------------------------~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 393 VVIIA----------------------------------------VAGNVLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred eEEec----------------------------------------cCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 76631 02258999999999999999999999988764
No 330
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.74 E-value=4.5e-06 Score=91.80 Aligned_cols=333 Identities=13% Similarity=0.095 Sum_probs=182.5
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..++ |--.+.+.+++.+.+... + .. .+. + ..+...+.-+++.
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~----~----~~---------~~~-----~---~~~~~~~la~~L~ 92 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKL----W----HT---------SNV-----F---YSAPPLKLAEELV 92 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhc----c----cc---------ccc-----c---CCHHHHHHHHHHH
Confidence 67889998644 555667777766543321 0 00 000 0 0122234555555
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C--C----CCC-eEEE-eccccchhhHHHHHHH----HhcCC-----EE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F--M----SVK-NLLT-VYDYESEAVEAMIRTS----EKRGA-----RV 242 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~--~----~gd-~ilt-~~d~~s~~v~~~~~~a----~~~G~-----~v 242 (632)
+++.. ...+.|+.|+|+|...+++--. + . +++ +|++ ...||......+. .. .+.+. .+
T Consensus 93 ~~~~~---~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~ 168 (408)
T PRK04612 93 TASRF---AEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVT-ATAQPKYQEGYEPLPGGF 168 (408)
T ss_pred hhCCC---CCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHH-hcCCcccccCCCCCCCCc
Confidence 55432 1279999999999887664321 1 1 123 4654 4567764332221 10 01111 11
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKDM 316 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~m 316 (632)
..++. -+.+.+++.+..+ .+..|.+.-+....|...| ++ +.++|+++|+++++|-++.. |..
T Consensus 169 ~~~~~------~d~~~l~~~~~~~-----~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~- 236 (408)
T PRK04612 169 RYVDF------NDVEALEAAMAGG-----DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRT- 236 (408)
T ss_pred eEcCC------CCHHHHHHhhCCC-----CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-
Confidence 12221 1578888877532 3456655555444455543 55 78899999999999998753 221
Q ss_pred CC-CC--CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 317 DS-FG--LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 317 ~~-ld--ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
.. +- .....||++ ++=|.+|. ---+|+++.+++.++.+.....+
T Consensus 237 G~~~a~~~~~~~pdi~--t~~K~l~~-G~piga~~~~~~~~~~~~~~~~~------------------------------ 283 (408)
T PRK04612 237 GTLFAHWQEQVTPDIV--TLAKALGG-GFPIGAMLAGPKVAETMQFGAHG------------------------------ 283 (408)
T ss_pred CchhhhhhcCCCCCEE--EEcchhcC-CCceEEEEECHHHHhhhcCCCcC------------------------------
Confidence 11 11 112244554 55796662 11278888777655444321100
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.| |.+ |.....+. .+.|+.+.+ +.+.+|++.+
T Consensus 284 -------~t--~~~------------~p~~~aaa------------------------~a~L~~~~~---~~l~~~~~~~ 315 (408)
T PRK04612 284 -------TT--FGG------------NPLAAAVA------------------------RVALRKLAS---PQIAANVARQ 315 (408)
T ss_pred -------CC--CCC------------CHHHHHHH------------------------HHHHHHHHh---ccHHHHHHHH
Confidence 00 000 00001111 256776654 4567888999
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
.++|.+.|.++.-.. +.+ +.- ..+|.++.+.+.+... -....+.+.+.++||.+..
T Consensus 316 g~~l~~~l~~l~~~~----~~i---~~v--rg~Gl~~~i~~~~~~~--~~a~~i~~~l~~~Gvlv~~------------- 371 (408)
T PRK04612 316 SAALRAGLEALNAEF----GVF---AQV--RGRGLMLGAVLAPAHA--GQAGAILDLAAEHGLLLLQ------------- 371 (408)
T ss_pred HHHHHHHHHHHHhhC----CCe---eee--eccceEEEEEecCchh--hHHHHHHHHHHHCCeEEee-------------
Confidence 999999998873211 222 211 2356677776643111 0134455566677887741
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+..+||+.+++..|.+||+++++.+.+.|..
T Consensus 372 ---------------------------~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 372 ---------------------------AGPDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred ---------------------------CCCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 12358999999999999999999999988764
No 331
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=98.73 E-value=6.2e-07 Score=91.01 Aligned_cols=290 Identities=14% Similarity=0.166 Sum_probs=177.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
.++......+||+|-+-. +.|+-++.-.|.--+.+++ ..|.|-|+.+.-+|+..+.++ +++++++
T Consensus 111 q~iHk~LE~kiAqfh~rE----D~ilypscfdANag~feai-l~pedAvfSDeLNhASIIdGi-rLckry~--------- 175 (417)
T KOG1359|consen 111 QDIHKLLESKIAQFHGRE----DTILYPSCFDANAGAFEAI-LTPEDAVFSDELNHASIIDGI-RLCKRYR--------- 175 (417)
T ss_pred hHHHHHHHHHHHHHhCCC----ceEEeccccccchHHHHHh-cChhhhhhccccccchhhhhh-HHHhhhc---------
Confidence 356677888899887753 2444556666666666666 566666776654444477774 4566443
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCC--------CCCCCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGP--------KDMDSF 319 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g--------~~m~~l 319 (632)
.+|.-+|+..+.++. +.+.+||+...+-++-|-..|++ |+.+++++|.++++|-++.-| ++ ..+
T Consensus 176 ----h~dv~~l~~~l~~a~--k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~-E~~ 248 (417)
T KOG1359|consen 176 ----HVDVFDLEHCLISAC--KMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTA-EEF 248 (417)
T ss_pred ----cchhHHHHHHHHHhh--hheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChH-HHh
Confidence 245556666555432 45679999999999999999999 999999999999999876542 21 223
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
++ .-++|.+....-|.+|. ..-|+.-..+.+++.|+... ++|..++. +
T Consensus 249 ~v-m~~vdiinsTLgKAlGg--a~GGyttgp~~li~llrqr~-----------RpylFSns-----l------------- 296 (417)
T KOG1359|consen 249 GV-MGDVDIINSTLGKALGG--ASGGYTTGPKPLISLLRQRS-----------RPYLFSNS-----L------------- 296 (417)
T ss_pred CC-CCcceehhhhhhhhhcC--CCCCCccCChhHHHHHHhcC-----------CceeecCC-----C-------------
Confidence 33 23689999999997772 12244333444443332210 11111000 0
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
-|.+.+.. .+++|++- +-..+..+.+...+|+++
T Consensus 297 ---------------------ppavV~~a-----------------------~ka~dllm--~s~~~i~~~~a~~qrfr~ 330 (417)
T KOG1359|consen 297 ---------------------PPAVVGMA-----------------------AKAYDLLM--VSSKEIQSRQANTQRFRE 330 (417)
T ss_pred ---------------------Chhhhhhh-----------------------HHHHHHHH--hhHHHHHHHHHHHHHHHH
Confidence 01112221 26666663 345667788888889998
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHH---hCCcEEccCccCChHHHhHHHHhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLAD---RENISLSYGSLHHIWFSDKYQKEK 556 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~---~~gI~lr~G~~c~~~~~~~~~~~~ 556 (632)
.+..- ++.|-|.. -||....+-| ..+..++++ +.||.+- |+ . |
T Consensus 331 ~me~a---------GftIsg~~-----hPI~pv~lGd-------a~lA~~~ad~lLk~Gi~Vi-gf------s--~---- 376 (417)
T KOG1359|consen 331 FMEAA---------GFTISGAS-----HPICPVMLGD-------ARLASKMADELLKRGIYVI-GF------S--Y---- 376 (417)
T ss_pred HHHhc---------CceecCCC-----CCccceeccc-------HHHHHHHHHHHHhcCceEE-ee------c--C----
Confidence 88764 47776642 3455444443 233333333 3577773 11 0 0
Q ss_pred hhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 557 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 557 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+. -+.+.-.|||-+.-.+|+||||++++++.+..+.
T Consensus 377 ------------Pv--------VP~gkariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 377 ------------PV--------VPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred ------------Cc--------CCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 01 1223458999999999999999999998876553
No 332
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.73 E-value=3.9e-06 Score=92.91 Aligned_cols=308 Identities=10% Similarity=0.052 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEE-EeccccchhhHHHHH----HHHhc
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLL-TVYDYESEAVEAMIR----TSEKR 238 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~il-t~~d~~s~~v~~~~~----~a~~~ 238 (632)
...+.-+++.+.+... -..|.|+.++|+|+..+.+--. + ++++ +|+ ....||....-.|.- ...+.
T Consensus 88 ~~~~lae~L~~~~p~~--~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~ 165 (429)
T PRK06173 88 PAVELAQKLLEILPPS--LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHG 165 (429)
T ss_pred HHHHHHHHHHhhCCCC--cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhh
Confidence 3346666777766422 2379999999998887654321 1 1333 355 445677632221110 00011
Q ss_pred C-----CEEEEEeccCCc-----cccCHHHHHHHHHhcCcCCCceeEEEEecc-CCCCccccchH-----HHHHHhhCCc
Q 006746 239 G-----ARVMSAEFSWPR-----LRINSEKLRKMVVSKGKKKKQRGLFVFPLH-SRMTGARYPYL-----WMRIAQENDW 302 (632)
Q Consensus 239 G-----~~v~~v~~~~~~-----~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~-sn~TG~~~pl~-----i~~~a~~~g~ 302 (632)
+ ..+..+|..... ...+++.+++.|... ...+..|.+.-+ ....|...|-. +.++|+++|+
T Consensus 166 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~---~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~ 242 (429)
T PRK06173 166 LFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQK---GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV 242 (429)
T ss_pred cccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhC---CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC
Confidence 1 112333331000 011355677777632 235677777764 67778875432 4578999999
Q ss_pred EEEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccccccccc
Q 006746 303 HILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTD 379 (632)
Q Consensus 303 ~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~ 379 (632)
++++|-+|.+ |.. +...+.....||+++ +=|.+|..-.-++.++++++.++.+.+.. .+. +.
T Consensus 243 llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~~p~~a~~~~~~i~~~~~~~~-~~~---------~~--- 307 (429)
T PRK06173 243 LLIFDEIATGFGRTGKLFALEHAGVVPDIMC--IGKALTGGYLTLSATITTEAIAQTICSGE-AKC---------FM--- 307 (429)
T ss_pred eEEecchhcCCCcCCcchHHHhcCCCCCEEE--eehhhhCCccccceEEecHHHHHHHhcCC-CCc---------cc---
Confidence 9999998853 211 111111233689887 57854421012577888887665443210 000 00
Q ss_pred ccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHH
Q 006746 380 EFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD 459 (632)
Q Consensus 380 ~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~ 459 (632)
..+|... .+++ ..+. .++|+++.
T Consensus 308 -------------------~~~T~~g-~p~~-------------~aaa------------------------~a~l~~i~ 330 (429)
T PRK06173 308 -------------------HGPTFMA-NPLA-------------CAIA------------------------AESIRLLL 330 (429)
T ss_pred -------------------cCCCCCc-CHHH-------------HHHH------------------------HHHHHHHH
Confidence 0111000 0111 1111 26777776
Q ss_pred hhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEc
Q 006746 460 SLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLS 539 (632)
Q Consensus 460 ~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr 539 (632)
+. .+.++++.+.++|.+.|.++. +.|.| +. . ..+|.++++.+.+. .....+.+.+.++||.++
T Consensus 331 ~~---~~~~~~~~~g~~l~~~L~~~~-----~~~~v---~~-v-Rg~Gl~~~iel~~~----~~~~~i~~~l~e~Gi~v~ 393 (429)
T PRK06173 331 ES---PWQQNIQRIEAQLKQELAPAA-----EFDSV---AE-V-RVLGAIGVVEMKEP----VNMATLQPRFVEHGIWVR 393 (429)
T ss_pred hC---CHHHHHHHHHHHHHHHHHHhh-----cCCCe---ee-e-eccceEEEEEeCCc----ccHHHHHHHHHHCCeEEE
Confidence 54 347788888899999888662 12333 11 1 23678888888653 234566666667798875
Q ss_pred cCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 540 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 540 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
.. + .+||+.+.+..|.+||+.+++.|.+-|+.-
T Consensus 394 ~~----------------------------------------g-~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 394 PF----------------------------------------G-KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred ec----------------------------------------C-CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 21 2 389999999999999999999999988753
No 333
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.72 E-value=9.9e-06 Score=89.56 Aligned_cols=309 Identities=10% Similarity=0.098 Sum_probs=164.3
Q ss_pred HHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCCCCeEE-EeccccchhhHHHHHHHH----hcCC-----EE
Q 006746 174 AMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY-PFMSVKNLL-TVYDYESEAVEAMIRTSE----KRGA-----RV 242 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~gd~il-t~~d~~s~~v~~~~~~a~----~~G~-----~v 242 (632)
+.-+++.+..+.+-. ..++|+.++++|+....+-. -+..+.+|+ ....||......+..... +.|. .+
T Consensus 88 ~la~~l~~~~~~~~~-~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (425)
T PRK08088 88 ELCEKMNQKVPGDFA-KKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHV 166 (425)
T ss_pred HHHHHHHHhCCCCCC-CEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCc
Confidence 444445555543211 26889999888655443321 123334454 455677632222211000 0011 01
Q ss_pred EEEeccCCccccC----HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-
Q 006746 243 MSAEFSWPRLRIN----SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG- 312 (632)
Q Consensus 243 ~~v~~~~~~~~i~----~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~- 312 (632)
..+++..+...++ ++++++.+.+.. ....+..|.+.-+....|...| ++ +.++|+++|+++++|-++..
T Consensus 167 ~~~~~p~~~~~~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~ 245 (425)
T PRK08088 167 YRALYPCPLHGVSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGA 245 (425)
T ss_pred EEcCCCccccCccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 1111110000122 445777775311 1235677777777777788777 77 88999999999999997663
Q ss_pred CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccc
Q 006746 313 PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 313 g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
+.. +..++.....|| +.++-|.+|. -.-+|++..+++.++.+.....+.+ |
T Consensus 246 g~~g~~~~~~~~~~~pd--i~s~sK~l~~-G~rig~v~~~~~~~~~~~~~~~~~t----------~-------------- 298 (425)
T PRK08088 246 GRTGTLFAMEQMGVAAD--LTTFAKSIAG-GFPLAGVTGRAEVMDAIAPGGLGGT----------Y-------------- 298 (425)
T ss_pred CcCcchhHHhhcCCCCC--EEEEeccccC-CCcceeeEecHHHHhhcCCCCCCCC----------C--------------
Confidence 221 112222233566 5778897761 1236999988777665543211100 0
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 470 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~ 470 (632)
+.. ++ . . ..++..++....+.+.+++
T Consensus 299 ----------~~~----~~-------------~---~------------------------~a~~~~l~~~~~~~~~~~~ 324 (425)
T PRK08088 299 ----------AGN----PI-------------A---C------------------------AAALAVLKVFEQENLLQKA 324 (425)
T ss_pred ----------CcC----HH-------------H---H------------------------HHHHHHHHHHHhcCHHHHH
Confidence 000 00 0 0 1333444443345667777
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC----CccCHHHHHHHHHhCCcEEccCccCCh
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR----EKIEPVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G----~~i~~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
+.+.+++.+.|.++.... |.+.- . ...|..+.+.+.+... .......+.+.+.++||.+..+
T Consensus 325 ~~~~~~~~~~l~~l~~~~----~~~~~--v---~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~----- 390 (425)
T PRK08088 325 NALGEKLKDGLLAIAEKH----PEIGD--V---RGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSC----- 390 (425)
T ss_pred HHHHHHHHHHHHHHHHhC----CCeEE--E---eccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecC-----
Confidence 777888888777763211 32211 1 1237777777742110 0111334444455578776421
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....+||+++.+..+.+||+..++.|++.+.+
T Consensus 391 ---------------------------------~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 391 ---------------------------------GPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred ---------------------------------CCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 001258999999999999999999999988753
No 334
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.72 E-value=5.4e-06 Score=92.56 Aligned_cols=345 Identities=11% Similarity=0.118 Sum_probs=186.5
Q ss_pred CCceEeecCC-----CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG-----IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMD 181 (632)
Q Consensus 107 ~~~vyLD~ag-----~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~ 181 (632)
++.-|||.+| .|.-.+.+++++.+.+... + + .+ +.. ..+...+.-+++++
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~----~--------~------~~--~~~-----~~~~~~~lae~L~~ 124 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKL----P--------F------SP--RRF-----TNETAIECAEKLTE 124 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhC----C--------C------cc--Ccc-----CCHHHHHHHHHHHH
Confidence 5678999875 3556677787766544321 0 0 00 000 12444567777888
Q ss_pred HcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEE-eccccchhhHHHHHHHH----hcC-----CEEEEEeccC-
Q 006746 182 FLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLT-VYDYESEAVEAMIRTSE----KRG-----ARVMSAEFSW- 249 (632)
Q Consensus 182 ~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt-~~d~~s~~v~~~~~~a~----~~G-----~~v~~v~~~~- 249 (632)
++.... ..|.|++++++|...+..--. +....+|++ ...||......+. ... +.+ ..+..+|...
T Consensus 125 ~~p~~~--~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (459)
T PRK06082 125 IAGGEL--NRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAIS-VGGEACFRQGMGPLMAGVERIPPAVS 201 (459)
T ss_pred hCCCCC--CEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHh-hcCCcccccCCCCCCCCCEEeCCCcc
Confidence 875321 279999999999887654321 222345654 4456653333321 110 000 1122333210
Q ss_pred ---Ccccc------CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 250 ---PRLRI------NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 250 ---~~~~i------~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
+-... +.+.+++.|... ..+..|++--+....+...| ++ +.++|+++|+++++|-+|.+ |..
T Consensus 202 ~~~~~~~~~~~~~~~~~~l~~~i~~~----~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 277 (459)
T PRK06082 202 YRGAFPDADGSDVHYADYLEYVIEKE----GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRT 277 (459)
T ss_pred cccccCChhHHHHHHHHHHHHHHhcC----CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 00001 124566666531 24566777666555333455 66 78899999999999998764 321
Q ss_pred --CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 316 --MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 316 --m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
+-....-...||+++ +=|.+|..-.-+|++.++++....... .+.
T Consensus 278 G~~fa~e~~gv~PDiv~--~gKgl~gG~~P~~av~~~~~i~~~~~~-~~~------------------------------ 324 (459)
T PRK06082 278 GEWFTHQAYGIEPDILC--IGKGLGGGLVPIAAMITKDKYNTAAQI-SLG------------------------------ 324 (459)
T ss_pred chhhHhHhhCCCCCEEE--ecccccCCCCcceEEEEcHHHHhhccC-CCC------------------------------
Confidence 101111223699887 568555210016888888765422210 000
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.+| |. | |.....+. .+.|+.+.+. .+.+|++.+
T Consensus 325 ------~~T--~~----------g--npl~~aaa------------------------~a~L~~l~~~---~l~~~~~~~ 357 (459)
T PRK06082 325 ------HYT--HE----------K--SPLGCAAA------------------------LATIEVIEQE---GLLEKVKAD 357 (459)
T ss_pred ------CCC--CC----------c--CHHHHHHH------------------------HHHHHHHHhc---CHHHHHHHH
Confidence 000 00 0 00001111 1567766543 467889999
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCcc-C---HHHHHHHHHhCCcEEccCccCChHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKI-E---PVLVQKLADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i-~---~~~V~kla~~~gI~lr~G~~c~~~~~ 549 (632)
.++|.+.|.++.-.. |.+ +. -.-+|.++++.+.+.....- + ...+...+-++||.++.
T Consensus 358 g~~l~~~L~~l~~~~----~~i---~~--vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~--------- 419 (459)
T PRK06082 358 SQFMRERLLEMKAKY----PLI---GD--VRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKV--------- 419 (459)
T ss_pred HHHHHHHHHHHHhhC----CCe---ee--eeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEe---------
Confidence 999999998873111 222 11 02357777777753211110 1 12333444456776642
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+..+||+++.+..|.+||+.+++.+.+.|..
T Consensus 420 -------------------------------~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 420 -------------------------------SQGNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred -------------------------------cCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 02258999999999999999999999988765
No 335
>PRK07482 hypothetical protein; Provisional
Probab=98.71 E-value=1.3e-05 Score=89.64 Aligned_cols=356 Identities=13% Similarity=0.113 Sum_probs=190.6
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|+|..++ |--.+.+++++.+.+... + |+. +.. ....+...+.-++++
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~----~--~~~-----------~~~------~~~~~~~~~lAe~L~ 104 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKEL----A--YYH-----------TYV------GHGTEASITLSKRII 104 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhc----C--ccc-----------ccc------ccCCHHHHHHHHHHH
Confidence 67889998866 555677777766544321 0 000 000 001233445666677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEEE-eccccchhhHHHH-----HHHHhcC---CEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLLT-VYDYESEAVEAMI-----RTSEKRG---ARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~ilt-~~d~~s~~v~~~~-----~~a~~~G---~~v~~ 244 (632)
+++..+ -..|.|+.|+|+|+..+++--. + .+++ +|+. ...||....-.+. ......| ..+..
T Consensus 105 ~~~p~~--~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~ 182 (461)
T PRK07482 105 DRAPAG--MSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLH 182 (461)
T ss_pred HhCCCC--cCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEE
Confidence 766422 1268999999999997665421 1 1233 4664 4567763322211 0001111 11223
Q ss_pred EeccCC-c----c-------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-----HHHHHhhCCcEEEEe
Q 006746 245 AEFSWP-R----L-------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-----WMRIAQENDWHILID 307 (632)
Q Consensus 245 v~~~~~-~----~-------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-----i~~~a~~~g~~vlvD 307 (632)
++.... . + .-+.+.+++.|.... ...+..|++.-+....|.+.|-+ +.++|+++|+++|+|
T Consensus 183 ~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~D 260 (461)
T PRK07482 183 TEAPHYYRRADAGMSEEQFSAYCADELEELILAEG--PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIAD 260 (461)
T ss_pred cCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEe
Confidence 322100 0 0 013466777775321 23466677766777778886533 457899999999999
Q ss_pred ccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCC-CCceeecccccccccccccCC
Q 006746 308 ACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTS-SGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 308 aaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~-gG~v~~~~~~~~~~~~~~~~~ 383 (632)
-+|.+ |.. +.-.+.-...||+++++ |.+|..-.-+|+++++++..+.+..... .|.+ +
T Consensus 261 EV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~---------~------- 322 (461)
T PRK07482 261 EVVTGFGRLGSMFGSDHYGIEPDLITVA--KGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAI---------G------- 322 (461)
T ss_pred ccccCCCcCcchhhHHhcCCCCCEEEEc--cccccCccccceeeecHHHHHHHhcccccCCcc---------c-------
Confidence 98764 321 11112223479999974 8554210126888888876554432100 0000 0
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCH
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 463 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl 463 (632)
..+|-. -.+++ ..+. .+.|+.+.+
T Consensus 323 ---------------h~~T~~-gnpl~-------------~Aaa------------------------~a~L~~~~~--- 346 (461)
T PRK07482 323 ---------------HGWTYS-GHPIC-------------AAAA------------------------LANLDILER--- 346 (461)
T ss_pred ---------------cCCCCC-cCHHH-------------HHHH------------------------HHHHHHHHh---
Confidence 011100 00111 1111 156666654
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCC--CCccCH-----HHHHHHHHhCC
Q 006746 464 TMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWK--REKIEP-----VLVQKLADREN 535 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~--G~~i~~-----~~V~kla~~~g 535 (632)
+.+.++++.+.++|.+.|.++.-.. |.| .| .-+|.++.+.+.+.. .+..++ ..+.+.+.++|
T Consensus 347 ~~l~~~~~~~g~~l~~~L~~l~~~~----~~v~~v------rG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~G 416 (461)
T PRK07482 347 ENLVGNAAEVGAYFRARLRAAFGDH----PLVGEV------RGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERG 416 (461)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcC----CCEEEE------eeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCC
Confidence 3567788888888888887663211 322 12 235677777775311 111121 23444445577
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|.++.+ . ...+||+.+.+-.|.+||+++++.+.+.|+.
T Consensus 417 vl~~~~--------------------------------------~-~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 417 VIARAM--------------------------------------P-HGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred cEEecC--------------------------------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 776421 0 1248999999999999999999999988864
No 336
>PRK07678 aminotransferase; Validated
Probab=98.71 E-value=8e-06 Score=91.01 Aligned_cols=354 Identities=14% Similarity=0.131 Sum_probs=190.7
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..++ |--.+.+++++.+.+... + .+ . . . + ..+...+.-+++.
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~----~-------~~------~-~-~---~---~~~~~~~lae~l~ 99 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTL----S-------YF------P-L-T---Q---SHEPAIKLAEKLN 99 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhc----C-------cc------c-c-c---c---CCHHHHHHHHHHH
Confidence 67889998544 555677777766543321 0 01 0 0 0 0 1133346677777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEEE-eccccchhhHHHHHHHH----hc--C---CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLLT-VYDYESEAVEAMIRTSE----KR--G---ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~ilt-~~d~~s~~v~~~~~~a~----~~--G---~~v~ 243 (632)
+++... ..|.|++++|+|...+++--. + ++|+ +|+. ...||......|. ... +. + ..+.
T Consensus 100 ~~~~~~---~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~ 175 (451)
T PRK07678 100 EWLGGE---YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALA-ATGQAQRKYKYEPLAPGFL 175 (451)
T ss_pred HhCCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhh-cCCCcccccccCCCCCCCE
Confidence 777542 269999999998887654321 1 1233 4654 4567763322221 100 00 0 1122
Q ss_pred EEeccCCcccc---------C---HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEE
Q 006746 244 SAEFSWPRLRI---------N---SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILI 306 (632)
Q Consensus 244 ~v~~~~~~~~i---------~---~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlv 306 (632)
.++.. ..... + .+.+++.|.... ...+..|.+--+....|...| ++ +.++|+++|+++|+
T Consensus 176 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~ 252 (451)
T PRK07678 176 HVPPP-DCYRMPGIESEDIYDLECVKEIDRVMTWEL--SETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLIS 252 (451)
T ss_pred EeCCC-ccccccccCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 33321 00011 1 233556665221 235677777667667888877 55 67889999999999
Q ss_pred eccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 307 DACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 307 Daaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
|-+|.+ |.. |--..--...||++++ =|.+|..--=+|++.+++++++.+.+....+. ++
T Consensus 253 DEV~tGfGRtG~~~~~~~~gv~PDivt~--gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~---------~~------- 314 (451)
T PRK07678 253 DEVICGFGRTGKAFGFMNYGVKPDIITM--AKGITSAYLPLSATAVKKEIYEAFKGKGEYEH---------FR------- 314 (451)
T ss_pred eehhhcCCcCchhHHHHhcCCCCCEEEe--ecccccCCcceeEEEEcHHHHHHHhccCcccc---------cc-------
Confidence 998753 321 1011112236999877 58554210018999999988765543210000 00
Q ss_pred CCCCccccchhhhhhhccccCCCc-cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSG-PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~-~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
..+| |.+ +++. ..+ .+.|+.+.+.
T Consensus 315 ---------------h~~T--~~gnp~~~------------aaa-------------------------~a~l~~l~~~- 339 (451)
T PRK07678 315 ---------------HVNT--FGGNPAAC------------ALA-------------------------LKNLEIMENE- 339 (451)
T ss_pred ---------------cCCC--CCcCHHHH------------HHH-------------------------HHHHHHHHhC-
Confidence 0111 110 1110 111 2567766653
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCCC--ccCH---HHHHHHHHhCCc
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKRE--KIEP---VLVQKLADRENI 536 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G~--~i~~---~~V~kla~~~gI 536 (632)
.+.+|++.+..+|.+.|.++.... |.+ .+ .-+|.++.+.+.+.... ..+. ..+.+.+.++||
T Consensus 340 --~~~~~~~~~g~~l~~~l~~~~~~~----~~v~~v------rg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv 407 (451)
T PRK07678 340 --NLIERSAQLGELLLEQLKEELGEH----PLVGDI------RGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGL 407 (451)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhcC----CCEEEE------EeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCc
Confidence 467788888888888886542111 222 12 23577777777532111 1122 234444556788
Q ss_pred EEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 537 SLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 537 ~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+... .+. ...+..+||+++.+..|.+||+++++.+.+.|+
T Consensus 408 ~~~~~---g~~-------------------------------v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~ 448 (451)
T PRK07678 408 IIGKN---GDT-------------------------------VAGYNNVLTLSPPLVISSEEIAFIVGTLKTALE 448 (451)
T ss_pred EEeec---Ccc-------------------------------ccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 77521 000 001235899999999999999999999998875
No 337
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.69 E-value=8e-06 Score=91.09 Aligned_cols=307 Identities=13% Similarity=0.173 Sum_probs=170.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHHH-----HhcCC-----
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRTS-----EKRGA----- 240 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~a-----~~~G~----- 240 (632)
.+.-+++++.+... ...|.|+.++|+|...+.+--....|+ +|+. ...||......+ ... .+.+.
T Consensus 99 ~~lae~L~~~~p~~--~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~ 175 (457)
T PRK05639 99 IRVAEKLAEISPIE--NPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGAT-SVAAFQSSQKRGFSPLMP 175 (457)
T ss_pred HHHHHHHHhhCCCC--cCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHH-HHcCCCcccccCCCCCCC
Confidence 45666777776432 137999999999988766543222344 4654 456776433222 111 11111
Q ss_pred EEEEEeccCCcc-------ccCH--------HHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhC
Q 006746 241 RVMSAEFSWPRL-------RINS--------EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQEN 300 (632)
Q Consensus 241 ~v~~v~~~~~~~-------~i~~--------~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~ 300 (632)
.+..+|...+.. .-+. +.+++.|.........+..|.+--+....|.+.| ++ +.++|+++
T Consensus 176 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~ 255 (457)
T PRK05639 176 NVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH 255 (457)
T ss_pred CceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 244555431100 0012 2344444221111235777777777777888776 33 56789999
Q ss_pred CcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccccccc
Q 006746 301 DWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWL 377 (632)
Q Consensus 301 g~~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~ 377 (632)
|+++++|-+|.+ |.. +-..+.-...||+++ +=|.+|. -.++|++..+++.++ ... |..
T Consensus 256 g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g-G~pi~av~~~~~i~~-~~~----~~~----------- 316 (457)
T PRK05639 256 GILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVAS-GMGLSGVIGRKELMD-LTS----GSA----------- 316 (457)
T ss_pred CCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcC-CCcceeEEehHHHHh-hcC----CCc-----------
Confidence 999999998763 210 101111123799988 5685542 235899999888765 211 100
Q ss_pred ccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHH
Q 006746 378 TDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ 457 (632)
Q Consensus 378 ~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~ 457 (632)
.+|.. ..+++ ...+ .+.|+.
T Consensus 317 ----------------------~~T~~-g~p~~------------~aaa-------------------------~a~l~~ 336 (457)
T PRK05639 317 ----------------------LLTPA-ANPVI------------SAAA-------------------------EATLEI 336 (457)
T ss_pred ----------------------ccCCC-cCHHH------------HHHH-------------------------HHHHHH
Confidence 00000 00000 0111 156666
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCH---HHHHHHHHhC
Q 006746 458 VDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEP---VLVQKLADRE 534 (632)
Q Consensus 458 ~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~---~~V~kla~~~ 534 (632)
+.+ +.+.++.+.+.++|++.|.++.... |.+ +. -.-+|-++.+.+.+..+.. ++ ..+.+.+.++
T Consensus 337 l~~---~~l~~~~~~~g~~l~~~L~~l~~~~----~~~---~~--VrG~Gl~~gve~~~~~~~~-~~~~~~~~~~~~~~~ 403 (457)
T PRK05639 337 IEE---ENLLKNALKVGEFIKKRLLEMKESF----EVI---GD--VRGKGLMIGVEIVKENGKP-DPELTGKICWRAFEL 403 (457)
T ss_pred HHH---ccHHHHHHHHHHHHHHHHHHHHHhC----CCE---Ee--eccceeEEEEEEecCCCCC-CHHHHHHHHHHHHhC
Confidence 654 4566788888999999998863211 322 11 0235666676664322211 11 2344444557
Q ss_pred CcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 535 NISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 535 gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
||.++.. +....+||+++.+..|.+||+.+++.+.+.|+.
T Consensus 404 Gv~~~~~--------------------------------------g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 404 GLILPSY--------------------------------------GMFGNVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred CeEEeec--------------------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 8877521 112359999999999999999999999998865
No 338
>PRK12403 putative aminotransferase; Provisional
Probab=98.69 E-value=6.3e-06 Score=92.06 Aligned_cols=222 Identities=15% Similarity=0.164 Sum_probs=121.5
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+ .|.-.+.+++++.+.++.. + + .+. .++. ..+...+.-++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~----~--~------------~~~----~~~~-~~~~~~~lae~L~ 108 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQL----P--Y------------YNM----FFHT-THPAVIELSELLF 108 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhC----C--C------------eec----cccc-CCHHHHHHHHHHH
Confidence 5788999543 3455577777766544321 0 0 000 0011 1234456777788
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCCe-EEE-eccccchhhHHHHHHH-H-hc--C---CEEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVKN-LLT-VYDYESEAVEAMIRTS-E-KR--G---ARVMSA 245 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd~-ilt-~~d~~s~~v~~~~~~a-~-~~--G---~~v~~v 245 (632)
+++...-+ .+.|++++|+|...+.+... + ++++. |+. ...||......|.-.- . .+ + -.+..+
T Consensus 109 ~~~p~~~~--~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~ 186 (460)
T PRK12403 109 SLLPGHYS--HAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHI 186 (460)
T ss_pred HhCCCCcC--EEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEe
Confidence 88763322 69999999999998766542 1 22334 443 3456764333321100 0 00 0 012333
Q ss_pred eccCC--c-ccc--------CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecc
Q 006746 246 EFSWP--R-LRI--------NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 246 ~~~~~--~-~~i--------~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaa 309 (632)
|.... . ..+ +.+++++.+.+.. +..+..|++--+....|.+.| ++ +.++|+++|+++++|-+
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV 264 (460)
T PRK12403 187 DEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEV 264 (460)
T ss_pred CCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 32100 0 001 1245555554321 235667777777778899988 88 89999999999999998
Q ss_pred ccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 310 ALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 310 q~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
|.+ |.. |-..+.-...||+++ +=|.+|..-.-+|+++++++.++.+
T Consensus 265 ~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~~Piga~v~~~~i~~~~ 313 (460)
T PRK12403 265 IGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGYVPMGGLVLSKRIAEAL 313 (460)
T ss_pred ccCCCcCchhhhhhhcCCCCCeEE--EcccccccccceEEEEECHHHHHHH
Confidence 854 221 111111123689997 5685552101278888887766544
No 339
>PRK07480 putative aminotransferase; Validated
Probab=98.67 E-value=8.6e-06 Score=90.85 Aligned_cols=222 Identities=13% Similarity=0.135 Sum_probs=120.2
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.+... + .+ +.. ++ ...+...+.-++++
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~----~-------~~-------~~~----~~-~~~~~~~~lae~L~ 104 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMREL----P-------YY-------NTF----FK-TTHPPAIELAAKLA 104 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhc----C-------Cc-------ccc----cc-cCCHHHHHHHHHHH
Confidence 57889998654 555677787766544321 1 00 000 00 01244456677777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEEE-eccccchhhHHHHH-----HHHhcCC---EEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLLT-VYDYESEAVEAMIR-----TSEKRGA---RVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~ilt-~~d~~s~~v~~~~~-----~a~~~G~---~v~~ 244 (632)
+++...- ..|.|+.++|+|...+++.-. + ++++ +|+. ...||......+.- ..+..|. .+..
T Consensus 105 ~~~p~~~--~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~ 182 (456)
T PRK07480 105 EVAPPGF--NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVH 182 (456)
T ss_pred HhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCee
Confidence 7764321 279999999999887664321 1 1333 3654 44677643322110 0011111 1222
Q ss_pred EeccCCc---cccC--------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEec
Q 006746 245 AEFSWPR---LRIN--------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDA 308 (632)
Q Consensus 245 v~~~~~~---~~i~--------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDa 308 (632)
++..... ...+ .+.+++.+.... ...+..|++--+....|...| ++ +.++|+++|+++++|-
T Consensus 183 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DE 260 (456)
T PRK07480 183 IDQPYWFGEGGDMTPEEFGLAAARQLEAKILELG--ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADE 260 (456)
T ss_pred cCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 3221000 0001 245555554321 235677777777777899887 67 7889999999999999
Q ss_pred cccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 309 CALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 309 aq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
+|.+ |.. |-..+.-...||++++ =|.+|..-.-+|+++++++.++.+
T Consensus 261 V~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~Pi~av~~~~~i~~~~ 310 (456)
T PRK07480 261 VICGFGRTGEWFGSQHFGIKPDLMTI--AKGLTSGYIPMGAVGVGDRVAEVL 310 (456)
T ss_pred hhhCCCcCcchhhhhhcCCCCCeeee--ehhhccCCccceEEEEcHHHHHHH
Confidence 8753 321 1112222346898766 485542000179999998876544
No 340
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=2.3e-06 Score=91.50 Aligned_cols=298 Identities=14% Similarity=0.173 Sum_probs=185.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCC-HHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTAN-RTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~n-aT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+...++.+.+|+|+|.+. .+||..+ +|-++ .+.+| ..+|.-|+++.-.|+..+.+ |+--|+.++...-
T Consensus 181 ~~~hkelE~l~A~f~g~e~---a~vF~mGf~TNs~--~~p~l-~~~gsLIiSDelNHaSi~~G----aRLSgAtiRVfkH 250 (519)
T KOG1357|consen 181 TEEHKELEELVARFLGVED---AIVFSMGFATNSM--NIPSL-LGKGSLIISDELNHASLITG----ARLSGATTRVFRH 250 (519)
T ss_pred HHHHHHHHHHHHHhcCCcc---eEEEecccccccc--Cccee-ecCCcceeeccccchheecc----ccccCceEEEEec
Confidence 4667789999999999963 6999876 22221 22222 45676677776555434433 5567999998876
Q ss_pred cCCccccCHHHHHHHHHh-------cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC-
Q 006746 248 SWPRLRINSEKLRKMVVS-------KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS- 318 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~-------~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~- 318 (632)
+ +.++|++.|.+ +|...-+.-++++-.....-|.+..+. ++++.|++.+++.+|.|++.|. |.+
T Consensus 251 N------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA-~g~t 323 (519)
T KOG1357|consen 251 N------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGA-MGAT 323 (519)
T ss_pred C------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccc-cCCC
Confidence 4 45566666553 222122445778888888999999999 9999999999999999998864 222
Q ss_pred -------CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 319 -------FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 319 -------ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
.++....+|.+.+.|-|-||. +-|.+--++..++.+..... ++ ++.
T Consensus 324 Grgvce~~g~d~~dvDImMGtftKSfga---~GGyiagsk~lid~lrt~s~--~~--------~ya-------------- 376 (519)
T KOG1357|consen 324 GRGVCEYFGVDPEDVDIMMGTFTKSFGA---AGGYIAGSKELIDYLRTPSP--SA--------LYA-------------- 376 (519)
T ss_pred CcceeeccCCCchhheeecceehhhccc---ccceecCcHHHHhhhccCCC--ce--------eec--------------
Confidence 334556789999999999994 44666667776655433211 11 000
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHh----hCHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDS----LGLTMIS 467 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~----~Gl~~I~ 467 (632)
| ..+.++ .+.. ..+++++.- -+...+.
T Consensus 377 ----------t-~~sppv--------------aqq~------------------------~ssl~~i~G~dgt~~g~~k~ 407 (519)
T KOG1357|consen 377 ----------T-SLSPPV--------------AQQI------------------------LTSVKHIMGEDGTNRGRQKI 407 (519)
T ss_pred ----------c-cCChHH--------------HHHH------------------------HHHHHhhcCCCcccHHHHHH
Confidence 0 000010 0111 144554431 1135566
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEE-ccCccCCh
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISL-SYGSLHHI 546 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~l-r~G~~c~~ 546 (632)
+|++.-+++++..|+++ | +.+||.++ +|++-.-+.... .-+....+++. .||.+ ..|+-|-+
T Consensus 408 ~~l~~ns~yfr~~l~~~------g---fivyG~~d----SpVvplll~~~~---k~~~f~r~~l~-~nigvVvvgfPatp 470 (519)
T KOG1357|consen 408 ERLAENSRYFRWELQKM------G---FIVYGNND----SPVVPLLLYGPA---KIVAFSREMLE-RNIGVVVVGFPATP 470 (519)
T ss_pred HHHHhhhHHHHHhhhcC------c---EEEecCCC----CCcceeeecCcc---cccHHHHHHHh-cCceEEEEeCCCch
Confidence 77788888999998887 4 78899864 455544444321 12333344554 45544 44544443
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
-. .+.+|+-+.--+|.||+|++++.+.+.=
T Consensus 471 l~----------------------------------e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 471 LL----------------------------------ESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred HH----------------------------------HhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 11 1356777778899999999999987653
No 341
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.65 E-value=8e-06 Score=90.39 Aligned_cols=302 Identities=13% Similarity=0.119 Sum_probs=170.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC-CC-----CCCC-eEE-EeccccchhhHHHHHHHH-----h--
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY-PF-----MSVK-NLL-TVYDYESEAVEAMIRTSE-----K-- 237 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl-~~-----~~gd-~il-t~~d~~s~~v~~~~~~a~-----~-- 237 (632)
.+.-+++++++... -..|.|+.++|+|.....+.- .+ .+|. +|+ ....||......+. ... +
T Consensus 91 ~~la~~l~~~~~~~--~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s-~~~~~~~~~~~ 167 (427)
T TIGR00508 91 IELCQKLVKMTPNA--LDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMS-VCDPENSMHSL 167 (427)
T ss_pred HHHHHHHHhhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhc-ccCCccccccc
Confidence 45666666776432 137999999999988766532 11 1233 455 56678864332221 100 0
Q ss_pred cC-C--EEEEEeccCCccc-------cCHHHHHHHHHhcCcCCCceeEEEEecc-CCCCcccc----chH-HHHHHhhCC
Q 006746 238 RG-A--RVMSAEFSWPRLR-------INSEKLRKMVVSKGKKKKQRGLFVFPLH-SRMTGARY----PYL-WMRIAQEND 301 (632)
Q Consensus 238 ~G-~--~v~~v~~~~~~~~-------i~~~~l~~~i~~~~~~~~~~~Lv~~~~~-sn~TG~~~----pl~-i~~~a~~~g 301 (632)
.+ . .+..++. |... -+.+++++.|... .+.+..|++..+ +...|... +++ +.++|+++|
T Consensus 168 ~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~ 242 (427)
T TIGR00508 168 YKGYLPEQIFAPA--PQNRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYD 242 (427)
T ss_pred ccccCCCCeEcCC--CCccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 00 0 1112221 1111 1346677777642 134667777765 66666654 455 678999999
Q ss_pred cEEEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccc
Q 006746 302 WHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLT 378 (632)
Q Consensus 302 ~~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~ 378 (632)
+++++|-++.+ |.. +-..+.....||+++ +=|.+|..-.-++++.+++++++.+.....+ . +.
T Consensus 243 ~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~-~---------~~-- 308 (427)
T TIGR00508 243 ILLIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTGGYMTLSATVTTDKVAQTISSGEAG-C---------FM-- 308 (427)
T ss_pred CEEEEeccccCCCcCCccchhhhcCCCCCEEE--echhhhcCcccceEEEEcHHHHHHHhcCCCC-c---------cc--
Confidence 99999998743 221 101112234789887 4785542101257777777776555421000 0 00
Q ss_pred cccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHH
Q 006746 379 DEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQV 458 (632)
Q Consensus 379 ~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~ 458 (632)
. .+| |.+ |.....+. .++|+++
T Consensus 309 ~--------------------~~T--~~g------------~p~~~aaa------------------------~a~l~~l 330 (427)
T TIGR00508 309 H--------------------GPT--FMG------------NPLACAVA------------------------EASLAIL 330 (427)
T ss_pred c--------------------CCC--CCc------------CHHHHHHH------------------------HHHHHHH
Confidence 0 001 000 00111111 2677777
Q ss_pred HhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEE
Q 006746 459 DSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISL 538 (632)
Q Consensus 459 ~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~l 538 (632)
.+. .+.++++.+.++|.+.|+++.- .+.+ +. . .-+|.++.+.+.+. ..+..+.+.+.++||.+
T Consensus 331 ~~~---~~~~~~~~~~~~l~~~L~~l~~-----~~~i---~~-v-rg~G~~~~i~~~~~----~~~~~~~~~l~~~Gv~~ 393 (427)
T TIGR00508 331 LEG---EWQKQVSAIENQLKRELSPLRK-----NPVV---KD-V-RVLGAIGVVEMYKP----VNVEELQKKFVEQGVWI 393 (427)
T ss_pred HhC---CHHHHHHHHHHHHHHHHHHhhc-----CCCE---Ee-E-eccccEEEEEECCc----cCHHHHHHHHHHCCeEE
Confidence 654 3468999999999999988721 1222 11 1 23588888888642 23455666666678877
Q ss_pred ccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 539 SYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 539 r~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.. + .++|+++.+..|.+||+++++.+.+.|.+
T Consensus 394 ~~~----------------------------------------~-~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 394 RPF----------------------------------------G-KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred Eec----------------------------------------C-CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 420 1 37999999999999999999999998754
No 342
>PRK06149 hypothetical protein; Provisional
Probab=98.65 E-value=1.4e-05 Score=96.89 Aligned_cols=309 Identities=11% Similarity=0.079 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHh---hCCCCCCCeEE-EeccccchhhHHHHHHHH---hcCC---
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAE---SYPFMSVKNLL-TVYDYESEAVEAMIRTSE---KRGA--- 240 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~---sl~~~~gd~il-t~~d~~s~~v~~~~~~a~---~~G~--- 240 (632)
...+.-+++++++.-. -..+.|++++|+|...+++ .+ ....+|+ ....||......+.-... ..+.
T Consensus 625 ~~~elae~L~~~~p~~--~~~v~f~~SGsEA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~ 700 (972)
T PRK06149 625 AVAEFSERLAALAPDG--LDTVFLVNSGSEANDLAIRLAWAA--SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALET 700 (972)
T ss_pred HHHHHHHHHHHhCCCC--cCEEEEeCCchHHHHHHHHHHHHh--cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCC
Confidence 3446677777777321 1279999999999998766 44 2233455 455788543322110000 0000
Q ss_pred ---EEEEEeccCC-cccc---C-----HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcE
Q 006746 241 ---RVMSAEFSWP-RLRI---N-----SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWH 303 (632)
Q Consensus 241 ---~v~~v~~~~~-~~~i---~-----~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~ 303 (632)
-+..++.... .+.. + .+++++.+.........+..|++--+....|.+.| ++ +.++|+++|++
T Consensus 701 ~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~l 780 (972)
T PRK06149 701 RPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGV 780 (972)
T ss_pred CCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1222322100 0001 1 24444444321111235677777777777899998 88 88999999999
Q ss_pred EEEeccccC-CCCCCC-C-CC--CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCC-CCCCceeeccccccccc
Q 006746 304 ILIDACALG-PKDMDS-F-GL--SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDN-TSSGMVSLLPAKKQLWL 377 (632)
Q Consensus 304 vlvDaaq~~-g~~m~~-l-dl--s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~-~~gG~v~~~~~~~~~~~ 377 (632)
+|+|-+|.+ |. +.. + .. -...||++++ =|-+|. -.-+|++.+++++++.+.+. .++++ +
T Consensus 781 lI~DEV~tGfGR-tG~~~~a~e~~gv~PDivt~--gK~lg~-G~Pl~av~~~~~i~~~~~~~~~~~sT----------~- 845 (972)
T PRK06149 781 CIADEVQVGYGR-LGHYFWGFEQQGVVPDIITM--AKGMGN-GHPLGAVITRREIAEALEAEGYFFSS----------T- 845 (972)
T ss_pred EEEEeehhcCCc-cCccchhhhhcCCCCCEEEe--cccccC-CeeeEEEEEcHHHHhhhccCCcccCC----------C-
Confidence 999998843 32 122 1 11 1236898855 585542 12379999998887655431 00000 0
Q ss_pred ccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHH
Q 006746 378 TDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ 457 (632)
Q Consensus 378 ~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~ 457 (632)
.| .+++. ..+ .+.|+.
T Consensus 846 ----------------------~g-----nP~~~------------aaa-------------------------la~L~~ 861 (972)
T PRK06149 846 ----------------------GG-----SPVSC------------RIG-------------------------MAVLDV 861 (972)
T ss_pred ----------------------CC-----CHHHH------------HHH-------------------------HHHHHH
Confidence 00 01110 111 156666
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCcc-C---HHHHHHHHHh
Q 006746 458 VDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKI-E---PVLVQKLADR 533 (632)
Q Consensus 458 ~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i-~---~~~V~kla~~ 533 (632)
+++. .+.++.+.+.++|+++|.++.-.. |.|... .-+|-++.+.+.......- + ...+.+.+.+
T Consensus 862 i~~e---~l~~~~~~~G~~l~~~L~~l~~~~----~~i~~v-----rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~ 929 (972)
T PRK06149 862 LREE---KLQENARRVGDHLKARLEALADRH----PLIGAV-----HGMGLYLGVELVRDRQTLEPATEETAAICDRLLE 929 (972)
T ss_pred HHhc---CHHHHHHHHHHHHHHHHHHHHHhC----CCeEEE-----eecceEEEEEEecCcccCCCChHHHHHHHHHHHh
Confidence 6553 577888889999999998873111 323111 2356777777643111110 1 2234444455
Q ss_pred CCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 534 ENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 534 ~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+||.++.. +....+||+.+.+..|.+||+.+++.|.+.|..
T Consensus 930 ~Gvl~~~~--------------------------------------g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 930 LGVIMQPT--------------------------------------GDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCeEEeec--------------------------------------CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 78887531 112358999999999999999999999998864
No 343
>PRK07481 hypothetical protein; Provisional
Probab=98.64 E-value=1.3e-05 Score=89.35 Aligned_cols=314 Identities=15% Similarity=0.182 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEE-EeccccchhhHHHHHHHH----h
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLL-TVYDYESEAVEAMIRTSE----K 237 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~il-t~~d~~s~~v~~~~~~a~----~ 237 (632)
+...+.-+++.++++- ++-..|.|++++|+|...+.+--. + ++|+ +|+ ....||......| .... +
T Consensus 86 ~~~~~lae~L~~~~~~-~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~-s~~~~~~~~ 163 (449)
T PRK07481 86 PRAIELSYELIDMFAP-EGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGA-SVNGNTVFR 163 (449)
T ss_pred HHHHHHHHHHHHhcCC-CCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhh-ccCCCcccc
Confidence 3344667777777642 122369999999998887654321 1 1333 455 4556776332222 1100 0
Q ss_pred --cC---CEEEEEeccCCc----cccCHHH--------HHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHH
Q 006746 238 --RG---ARVMSAEFSWPR----LRINSEK--------LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMR 295 (632)
Q Consensus 238 --~G---~~v~~v~~~~~~----~~i~~~~--------l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~ 295 (632)
.+ ..+..++..... ...+.+. +++.|... .+..+..|++.-+....|.+.| ++ +.+
T Consensus 164 ~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~--~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~ 241 (449)
T PRK07481 164 RNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQ--GPDTIAAFIAEPVQGAGGVIVPPANFWPLVRE 241 (449)
T ss_pred cccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCcCCccCCHHHHHHHHH
Confidence 00 112223221000 0012333 34444311 1235777888888888898877 56 678
Q ss_pred HHhhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCC-CCceeeccc
Q 006746 296 IAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTS-SGMVSLLPA 371 (632)
Q Consensus 296 ~a~~~g~~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~-gG~v~~~~~ 371 (632)
+|+++|+++++|-+|.+ |.. |-....-...||+++++ |.+|..-.=+|++.++++.++.+.+... ++.
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~------ 313 (449)
T PRK07481 242 VCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYVPLGATMVNARIADAFEANADFGGA------ 313 (449)
T ss_pred HHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccCCCcCceEEEEcHHHHHHHhccCccccc------
Confidence 89999999999998764 321 11112223479998874 8554200017999999887765543110 000
Q ss_pred ccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhh
Q 006746 372 KKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIE 451 (632)
Q Consensus 372 ~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 451 (632)
++ ..+|.. ..+++. ..+
T Consensus 314 ---~~----------------------h~~T~~-gnpl~~------------aaa------------------------- 330 (449)
T PRK07481 314 ---IM----------------------HGYTYS-GHPVAC------------AAA------------------------- 330 (449)
T ss_pred ---cc----------------------cCCCCC-CCHHHH------------HHH-------------------------
Confidence 00 011100 001110 011
Q ss_pred hhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCC--CCccC-----
Q 006746 452 CRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWK--REKIE----- 523 (632)
Q Consensus 452 ~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~--G~~i~----- 523 (632)
.+.|+.+.+ +++.++++.+.++|.+.|.++.... |.+ .+ .-+|.++.+.+.+.. .+..+
T Consensus 331 ~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~----~~i~~v------rG~Glm~gi~l~~~~~~~~~~~~~~~~ 397 (449)
T PRK07481 331 LATLDIVVR---EDLPANAAKRGAYLLEGLQPLKERF----ELVGDV------RGKGLMLALDLVADKATREPIDPSKGY 397 (449)
T ss_pred HHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhcC----CCeEEE------eecceEEEEEecccccccCCCCchhHH
Confidence 145555543 5677888999999999998874211 322 11 235667777764321 11111
Q ss_pred HHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHH
Q 006746 524 PVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLW 603 (632)
Q Consensus 524 ~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv 603 (632)
...+.+.+.++||.++.. + .++|+++.+..|.+||+.++
T Consensus 398 ~~~~~~~~~~~Gvl~~~~----------------------------------------g-~~i~l~Ppl~it~~eid~~~ 436 (449)
T PRK07481 398 ANAVADVARENGVLVRPS----------------------------------------G-TKIILSPPLVIQREDVDRIV 436 (449)
T ss_pred HHHHHHHHHhCCeEEEec----------------------------------------C-CEEEEECCCCCCHHHHHHHH
Confidence 123444445577776421 1 36899999999999999999
Q ss_pred HHHHHhhhh
Q 006746 604 AFVAQFLDA 612 (632)
Q Consensus 604 ~~l~~~l~~ 612 (632)
+.+.+.|+.
T Consensus 437 ~~l~~~l~~ 445 (449)
T PRK07481 437 DALDAGLSA 445 (449)
T ss_pred HHHHHHHHh
Confidence 999988754
No 344
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.63 E-value=1.2e-05 Score=89.58 Aligned_cols=77 Identities=13% Similarity=0.247 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--C---CCCCCCCC
Q 006746 256 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--M---DSFGLSLV 324 (632)
Q Consensus 256 ~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m---~~ldls~~ 324 (632)
.+.++++|... ...+..|++.-+....|.+.| ++ +.++|+++|+++|+|-+|.+ |.. + ..+|+. .
T Consensus 238 l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~-~ 313 (464)
T TIGR00699 238 LEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLD-D 313 (464)
T ss_pred HHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCC-C
Confidence 45567777532 134677778778888899998 88 88999999999999998763 220 0 112332 3
Q ss_pred CCcEEEEccccccC
Q 006746 325 RPDFLICSFYQIFG 338 (632)
Q Consensus 325 ~~Df~~~S~hK~~G 338 (632)
.||++++ =|.+|
T Consensus 314 ~PDi~t~--gK~lg 325 (464)
T TIGR00699 314 PPDMVTF--SKKFQ 325 (464)
T ss_pred CCCEEEe--hhhhc
Confidence 4999766 58664
No 345
>PRK06148 hypothetical protein; Provisional
Probab=98.63 E-value=1.6e-05 Score=96.83 Aligned_cols=349 Identities=15% Similarity=0.145 Sum_probs=190.7
Q ss_pred CCceEeecCC----CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG----IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (632)
Q Consensus 107 ~~~vyLD~ag----~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~ 182 (632)
+++.|||..+ .|--.+.+++++.+.+... |.++. | ..+...+.-+++++.
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l---------------------~~~~~--~---~~~~~~~lAe~L~~~ 675 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARL---------------------NTNTR--Y---LHDAIVAYAERLTAT 675 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhc---------------------CCcCC--c---CCHHHHHHHHHHHHh
Confidence 5788999853 4455566777765543221 01111 1 123344566667776
Q ss_pred cCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEE-EeccccchhhHHHHH----HHHhcC----CEEEEEeccCC-c
Q 006746 183 LNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLL-TVYDYESEAVEAMIR----TSEKRG----ARVMSAEFSWP-R 251 (632)
Q Consensus 183 l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~il-t~~d~~s~~v~~~~~----~a~~~G----~~v~~v~~~~~-~ 251 (632)
+... -..+.|++++|+|...+++--..-.|. +|+ ....||......+.- .-+..+ ..+..++.... .
T Consensus 676 ~p~~--~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~ 753 (1013)
T PRK06148 676 LPDG--LTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYR 753 (1013)
T ss_pred CCCC--cCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccc
Confidence 6422 126899999999988766543222344 465 455677643322210 000011 11222221100 0
Q ss_pred ccc---C-------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 252 LRI---N-------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 252 ~~i---~-------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
... + .+++++.|..-......+..|++--+....|.+.| ++ +.++|+++|+++|+|-+|.+ |..
T Consensus 754 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRt 833 (1013)
T PRK06148 754 GPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRV 833 (1013)
T ss_pred cCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCC
Confidence 000 1 13455555421111234677777777777888887 66 77899999999999998864 320
Q ss_pred ---CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCC-CCCceeecccccccccccccCCCCCCcccc
Q 006746 316 ---MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNT-SSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 316 ---m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~-~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
+-........||++++ =|.+|. -.-+|++..+++.++.+.+.. ++++ |
T Consensus 834 G~~~~a~e~~gv~PDivt~--gK~lgg-G~Plgav~~~~ei~~~~~~g~~~~~T----------f--------------- 885 (1013)
T PRK06148 834 GSHWWAFETQGVVPDIVTM--GKPIGN-GHPMGAVVTTREIADSFDNGMEYFNT----------F--------------- 885 (1013)
T ss_pred CCcchhhhhcCCCcceeee--cccccC-CcceEEEEEcHHHHhhccCCCccccC----------C---------------
Confidence 1111112347999877 484442 123899999988776553210 0000 0
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGR 471 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~ 471 (632)
.|. +++. ..+ .+.|+.+.+ +.+.++++
T Consensus 886 --------~gn-----pla~------------aaa-------------------------~a~L~~i~~---e~l~~~~~ 912 (1013)
T PRK06148 886 --------GGN-----PVSC------------AIG-------------------------LAVLDIIED---EDLQRNAL 912 (1013)
T ss_pred --------CCC-----HHHH------------HHH-------------------------HHHHHHHhh---ccHHHHHH
Confidence 000 1110 111 155666654 45778888
Q ss_pred HHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCCCcc-C---HHHHHHHHHhCCcEEccCccCCh
Q 006746 472 CLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKI-E---PVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 472 ~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G~~i-~---~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
.+.++|+++|.++.... |.+ .| .-+|.++.+.+...+...- + ...+.+.+.++||.++..
T Consensus 913 ~~G~~l~~~L~~l~~~~----~~i~~V------rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----- 977 (1013)
T PRK06148 913 EIGNYLLAGLRELQDRF----DIIGDV------RGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE----- 977 (1013)
T ss_pred HHHHHHHHHHHHHHHhC----CCceEE------eeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc-----
Confidence 99999999998873211 222 12 1246666776643211111 1 123444444578887521
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+....+||+.+.+..|.+||+++++.+.+.|.+
T Consensus 978 ---------------------------------g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 978 ---------------------------------GPHDNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred ---------------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 012358999999999999999999999998864
No 346
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.62 E-value=3.2e-05 Score=86.19 Aligned_cols=351 Identities=13% Similarity=0.157 Sum_probs=185.9
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..++ |--.+.+.+++.+.++.... .. .+ . ...+...+.-+++.
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~------~~----------~~---~-----~~~~~~~~la~~L~ 107 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIH------TG----------FN---V-----MMYEPYIELAEKLA 107 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccC------cc----------cc---c-----cccHHHHHHHHHHH
Confidence 67889997544 55667778776654432100 00 00 0 01233446666777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEE-eccccchhhHHHHHHHH-----hc--C---CEEEEEecc
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLT-VYDYESEAVEAMIRTSE-----KR--G---ARVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt-~~d~~s~~v~~~~~~a~-----~~--G---~~v~~v~~~ 248 (632)
+++..... ..|.|+.++|+|...+++--. +....+|+. ...||......| .... +. + ..+..+|..
T Consensus 108 ~~~p~~~~-~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (451)
T PRK06918 108 ALAPGSFD-KKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTM-TMTSKVKPYKFGFGPFAPEVYKAPFP 185 (451)
T ss_pred HhCCCCCC-CEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhh-hhcCCCccccccCCCCCCCcEEcCCC
Confidence 77643211 279999999998887655321 222234654 456776433332 1110 00 1 113333331
Q ss_pred C----CccccC-------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC
Q 006746 249 W----PRLRIN-------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG 312 (632)
Q Consensus 249 ~----~~~~i~-------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~ 312 (632)
. +.+... .+.+++.+.... ....+..|++--+....|...| ++ +.++|+++|++++.|-++..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg 264 (451)
T PRK06918 186 YEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTG 264 (451)
T ss_pred ccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 0 111000 123344332110 1234666666666666787665 45 67889999999999997653
Q ss_pred -CCCCCCCCCCCC--CCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 313 -PKDMDSFGLSLV--RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 313 -g~~m~~ldls~~--~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
+..=..+-+..+ .||++ ++=|.+|. ---+|+++.+++.++.+.+...+++ |
T Consensus 265 ~gr~g~~~a~~~~~v~pDi~--t~sK~l~~-G~pig~v~~~~~i~~~~~~~~~~~T----------~------------- 318 (451)
T PRK06918 265 FARTGKYFAIEHFDVVPDLI--TVSKSLGA-GVPISGVIGRKEIMDESAPGELGGT----------Y------------- 318 (451)
T ss_pred cCccCceehhHhcCCCCCEE--eeehhhcC-CCccEEEEEcHHHHhccCCCCcCcC----------C-------------
Confidence 221001112222 48844 67896551 2236999988877655533111100 0
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 469 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r 469 (632)
.+ .+++ ...+ .+.|+.+.+ +.+.+|
T Consensus 319 ----------~g-----~~l~------------~aaa-------------------------~a~l~~i~~---~~~~~~ 343 (451)
T PRK06918 319 ----------AG-----SPLG------------CAAA-------------------------LAVLDIIEK---ENLNDR 343 (451)
T ss_pred ----------Cc-----CHHH------------HHHH-------------------------HHHHHHHHH---CCHHHH
Confidence 00 0000 0011 145666644 346778
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCCCcc-CH---HHHHHHHHhCCcEEccCccC
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKI-EP---VLVQKLADRENISLSYGSLH 544 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G~~i-~~---~~V~kla~~~gI~lr~G~~c 544 (632)
++.+.++|.+.|.++.... |.+ .+ ...|.+..+.+........ +. ..+.+.+.++||.+..+.
T Consensus 344 ~~~~g~~l~~~l~~l~~~~----~~~~~v------rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~-- 411 (451)
T PRK06918 344 AIELGKVVMNRFEEMKNKY----NCIGDV------RGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAG-- 411 (451)
T ss_pred HHHHHHHHHHHHHHHHhhC----CCceee------ccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecC--
Confidence 8888899988888873111 221 11 1246777666532111111 12 233334456888886430
Q ss_pred ChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 545 HIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
. ...+||+++.+..|.+||+.+++.|.++|..-
T Consensus 412 -----------------------------------~-~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 412 -----------------------------------T-YGNVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred -----------------------------------C-CCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 0 12589999999889999999999999998653
No 347
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.62 E-value=1.8e-05 Score=88.14 Aligned_cols=352 Identities=14% Similarity=0.106 Sum_probs=191.8
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|||..++ |--.+.+.+++.+.++.. + .. .+.. ...+...+.-++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~----~----~~---------~~~~-------~~~~~~~~lAe~L~ 107 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTL----E----HA---------MLAG-------CTHEPAIELAERLA 107 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhc----C----Cc---------cccc-------cCCHHHHHHHHHHH
Confidence 57889998644 667778888776544321 0 00 0000 01133345666677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CC-----CCC-CeEE-EeccccchhhHHHHHH---HHhcC-----CEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PF-----MSV-KNLL-TVYDYESEAVEAMIRT---SEKRG-----ARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~-----~~g-d~il-t~~d~~s~~v~~~~~~---a~~~G-----~~v~~ 244 (632)
+.++..- ..+.|+.++|+|...+.+-- .+ .+| .+|+ ....||....-.|.-. ..+.+ ..+..
T Consensus 108 ~~~p~~~--~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~ 185 (453)
T PRK06943 108 ALTGGTL--GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHV 185 (453)
T ss_pred HhCCCCC--CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEE
Confidence 7665321 26999999999888766542 11 123 3465 4457776432222100 00111 01233
Q ss_pred EeccCCcc----c-------cCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccch----H-HHHHHhhCCcEEEEe
Q 006746 245 AEFSWPRL----R-------INSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYPY----L-WMRIAQENDWHILID 307 (632)
Q Consensus 245 v~~~~~~~----~-------i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~pl----~-i~~~a~~~g~~vlvD 307 (632)
++.....+ . -+.+++++.|... ...+..|++.- +....|...|- + +-++|+++|+++++|
T Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~D 262 (453)
T PRK06943 186 VASPDARGARPGETAADVAARALADVRRLFAER---AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIAD 262 (453)
T ss_pred ECCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence 43321100 0 1246677777632 23466666665 46677887652 2 457899999999999
Q ss_pred ccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCC
Q 006746 308 ACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSC 384 (632)
Q Consensus 308 aaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~ 384 (632)
-+|.+ |.. |-..+.-...||+++++ |-+|..-.-+|++.+++++++.+.+....+. ++
T Consensus 263 EV~TG~GRtG~~fa~~~~gv~PDivt~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~---------~~-------- 323 (453)
T PRK06943 263 EIAVGCGRTGTFFACEQAGVWPDFLCLS--KGISGGYLPLSLVLSRDAIFAAFYDDDVTRG---------FL-------- 323 (453)
T ss_pred chhhCCCCCcchhHHHhCCCCCCeEeee--hhhccCcccceEEEEcHHHHHhhcccCccCC---------cc--------
Confidence 98764 321 11112223479999984 7433110128999999888765532100000 00
Q ss_pred CCCccccchhhhhhhccccCCC-ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCH
Q 006746 385 ETEPEQTSKSKQEKVAATNTFS-GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 463 (632)
Q Consensus 385 ~~e~~~~~~~~~e~e~gt~~f~-~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl 463 (632)
..+| |. .+++. ..+ .+.|+.+++.
T Consensus 324 --------------~~~T--~~gnpl~~------------aaa-------------------------~a~L~~i~~~-- 348 (453)
T PRK06943 324 --------------HSHS--YTGNPLAC------------RAA-------------------------LATLDLFAED-- 348 (453)
T ss_pred --------------CCCC--CCCCHHHH------------HHH-------------------------HHHHHHHHhc--
Confidence 0111 11 01110 111 1566666653
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCcc--CHHHHHHHHHhCCcEEccC
Q 006746 464 TMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKI--EPVLVQKLADRENISLSYG 541 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i--~~~~V~kla~~~gI~lr~G 541 (632)
.+.++++.+.++|.+.|.++.- .|.|. . . .-+|.++.+.+... .+.- -...+.+.+.++||.++.
T Consensus 349 -~l~~~~~~~G~~l~~~L~~l~~-----~~~v~---~-v-rG~Gl~~gvel~~~-~~~~~~~~~~i~~~~~~~Gll~~~- 415 (453)
T PRK06943 349 -DVLARNARKSARLRAALAPLAA-----HPQVR---H-L-RQRGTIFAFDVALD-GDAARTFSRRFFEAALERELLLRP- 415 (453)
T ss_pred -CHHHHHHHHHHHHHHHHHHHhc-----CCCEE---e-E-eccccEEEEEEccC-CCcchHHHHHHHHHHHHCCcEEEe-
Confidence 4567888888888888888731 13331 1 1 23677888877521 1110 022344445567777641
Q ss_pred ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhcc
Q 006746 542 SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADF 614 (632)
Q Consensus 542 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f 614 (632)
.+ .++|+++.+-.|.+||+++++.|.+.|+.-+
T Consensus 416 ---------------------------------------~g-~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 416 ---------------------------------------IG-TTVYLMPPYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred ---------------------------------------cC-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 01 3799999999999999999999999987643
No 348
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.60 E-value=1.6e-05 Score=84.95 Aligned_cols=318 Identities=13% Similarity=0.065 Sum_probs=190.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHH----HHHHhhCCCCCCC----eEEEec-cccchhhHHHHHHHHhcC
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAF----KLLAESYPFMSVK----NLLTVY-DYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al----~lv~~sl~~~~gd----~ilt~~-d~~s~~v~~~~~~a~~~G 239 (632)
.+++.+..+.+.++-|-+ .|.+.+|+-+.= -++++.|.-..|+ .+|++. -|-.| +. .|.--|
T Consensus 108 l~li~~Lq~~L~~ITG~D----avsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN--PA---SAam~G 178 (496)
T COG1003 108 LELIYELQEWLKEITGMD----AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN--PA---SAAMAG 178 (496)
T ss_pred HHHHHHHHHHHHHhcCCc----eeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC--hh---hHhhcC
Confidence 578888888899998886 578887754322 2455666433333 255554 34333 21 345579
Q ss_pred CEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccc-cchH-HHHHHhhCCcEEEEeccc---cCCC
Q 006746 240 ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYL-WMRIAQENDWHILIDACA---LGPK 314 (632)
Q Consensus 240 ~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~-~pl~-i~~~a~~~g~~vlvDaaq---~~g~ 314 (632)
.+|+.|+.+ .+|.||+++|++++.+++ ..+.++.-|+ -|.- -+|. |+++.|+.|..|..|+|- .+|.
T Consensus 179 ~~VV~V~~~-~~G~VDlddLk~k~~~~~------AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~ 250 (496)
T COG1003 179 FKVVVVKCD-ENGNVDLDDLRAKAEDNL------AALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL 250 (496)
T ss_pred ceEEEEecC-CCCCccHHHHHHHhccce------eEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc
Confidence 999999998 889999999999998654 5566666654 4554 5788 999999999999999974 3443
Q ss_pred CCCCCCCCCCCCcEEEEcccccc----CCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccc
Q 006746 315 DMDSFGLSLVRPDFLICSFYQIF----GENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 315 ~m~~ldls~~~~Df~~~S~hK~~----G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
. .| -+++.|++=++.||.| |...+|.|-+-||..+..-|..+. . .-....|.. +. +.
T Consensus 251 ~-rP---Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~-~-----~~~~~~y~~-~~--------~~ 311 (496)
T COG1003 251 A-RP---GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPV-V-----YHDVGEYRL-DY--------DG 311 (496)
T ss_pred c-cc---cccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCc-c-----cCCCccccc-cC--------CC
Confidence 1 23 3468899999999954 111348888999977655443211 0 000000000 00 00
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC---HHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG---LTMIS 467 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G---l~~I~ 467 (632)
. ... +-..+| .|...|.-.+.-++..+| +....
T Consensus 312 ~-~s~----g~~~a~---------------------------------------~Gs~~il~~a~~YI~~mG~~GL~~as 347 (496)
T COG1003 312 K-KSI----GVSAAP---------------------------------------YGSASILPIAWAYIRMMGADGLKQAS 347 (496)
T ss_pred C-ccc----eeeccc---------------------------------------cCcchHHHHHHHHHHHHhHHHHHHHH
Confidence 0 000 000011 122223336777777664 66777
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEE-EccCCCCccCHHHHHHHHHhCCcEEccCccCCh
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN-VFDWKREKIEPVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFn-v~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
+..---+||+..+|+.- .++ .|.+...-.+--|++.. +....| |....|.|.+-++|++-=|=+|=
T Consensus 348 e~AvLNANYia~rL~~~-------y~~--~y~~~~~~~HE~ild~r~l~~~~G--v~~~DvAKrLlD~GfHaPT~~FP-- 414 (496)
T COG1003 348 EVAVLNANYIARRLKGY-------YPV--PYTGENRVAHECILDARPLKKETG--VRALDVAKRLLDYGFHAPTMYFP-- 414 (496)
T ss_pred HHHHHhHHHHHHHhhhc-------Ccc--ccCCCCcceeEEEeechHhHhhcC--CcHHHHHHHHHhcCCCCCcccCc--
Confidence 77777789999999863 121 35554211223344433 222233 78888887766677654322110
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
-.-.+.+=|=+----+.+++|||++++.++..+
T Consensus 415 ---------------------------------liV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 415 ---------------------------------LIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred ---------------------------------cccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 001234455555667899999999999987665
No 349
>PLN02397 aspartate transaminase
Probab=98.59 E-value=1.7e-05 Score=87.72 Aligned_cols=167 Identities=12% Similarity=0.088 Sum_probs=99.8
Q ss_pred HHHHHHHHHcCCCC----CCccE--EEeCCHHHHHHHHHhhCC-CCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDFLNISE----NDYGM--VFTANRTSAFKLLAESYP-FMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~l~a~~----~ey~v--vft~naT~al~lv~~sl~-~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
+.|+.|++++.-.. .+..| +.+.+++.+..++...+- +.+||+|++.. .|+. ....++..|++++.+
T Consensus 95 ~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~-----y~~~~~~~g~~~~~v 169 (423)
T PLN02397 95 EFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGN-----HHNIFRDAGVPVRTY 169 (423)
T ss_pred HHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchh-----HHHHHHHcCCeEEEe
Confidence 67888888663221 01123 223344444433322211 35899977543 4432 234456789999999
Q ss_pred ecc-CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEeccc--cC--CC--
Q 006746 246 EFS-WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACA--LG--PK-- 314 (632)
Q Consensus 246 ~~~-~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq--~~--g~-- 314 (632)
+.. ..+..+|.+.+++.+.+.+ +++++++++..+|+||..++.+ | +++|+++|+++++|-+- +. +.
T Consensus 170 ~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~ 246 (423)
T PLN02397 170 RYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDA 246 (423)
T ss_pred ecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhh
Confidence 873 2235689998888876421 2468899999999999999877 5 56788999999999762 21 10
Q ss_pred CCCCC-CCCCCCC-cEEEEccccccCCCCCceEEEE
Q 006746 315 DMDSF-GLSLVRP-DFLICSFYQIFGENPSGFGCLF 348 (632)
Q Consensus 315 ~m~~l-dls~~~~-Df~~~S~hK~~G~~P~G~G~L~ 348 (632)
...++ .+...+. =+++.||-|.||.+---+|+++
T Consensus 247 ~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 247 DAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred hhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 00011 1111111 2667799999994222347775
No 350
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.58 E-value=1.3e-05 Score=88.62 Aligned_cols=343 Identities=13% Similarity=0.124 Sum_probs=186.9
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..+ .|--.+.+.+++.+.+..... .. ++....+...+.-++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~------~~------------------~~~~~~~~~~~lae~L~ 93 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSH------VM------------------FGGLTHEPAIKLTRKLL 93 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCC------cc------------------cCCcCCHHHHHHHHHHH
Confidence 6788999764 355567777776654432100 00 00001233446667777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCC-CeEE-EeccccchhhHHHHHHH----Hhc--C---CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSV-KNLL-TVYDYESEAVEAMIRTS----EKR--G---ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~g-d~il-t~~d~~s~~v~~~~~~a----~~~--G---~~v~ 243 (632)
+++... -..|.|+.++|+|+..+.+--. + +++ .+|+ ....||......+.-.- .+. + ..+.
T Consensus 94 ~~~p~~--~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 171 (422)
T PRK05630 94 NLTDNG--LDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQI 171 (422)
T ss_pred hhCCCC--cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCe
Confidence 775422 1279999999998886654311 1 123 3465 45577763322221000 000 0 1223
Q ss_pred EEeccCCccccCH-------HHHHHHHHhcCcCCCceeEEEEecc-CCCCccccc----hH-HHHHHhhCCcEEEEeccc
Q 006746 244 SAEFSWPRLRINS-------EKLRKMVVSKGKKKKQRGLFVFPLH-SRMTGARYP----YL-WMRIAQENDWHILIDACA 310 (632)
Q Consensus 244 ~v~~~~~~~~i~~-------~~l~~~i~~~~~~~~~~~Lv~~~~~-sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq 310 (632)
.+|.. +....+. +.+++.|.+ .+..|++.-+ ....|...| ++ +.++|+++|+++++|-+|
T Consensus 172 ~~p~~-~~~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~ 244 (422)
T PRK05630 172 FAPAP-PVRGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA 244 (422)
T ss_pred EcCCC-cccCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce
Confidence 33332 1101111 233343432 3456666653 666787654 33 567899999999999987
Q ss_pred cC-CCC--CCCCCCCCCCCcEEEEccccccCC-CCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCC
Q 006746 311 LG-PKD--MDSFGLSLVRPDFLICSFYQIFGE-NPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 311 ~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~-~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
.+ |.. +-........||++++ =|.+|. .+ -+|++.+++++.+.+......|. ++.
T Consensus 245 tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~gG~~-p~~av~~~~~i~~~~~~~~~~~~---------~~h--------- 303 (422)
T PRK05630 245 TGFGRTGELFATLAAGVTPDIMCV--GKALTGGFM-SFAATLCTDKVAQLISTPNGGGA---------LMH--------- 303 (422)
T ss_pred eCCCcCchhhHHHhcCCCCCeeee--echhhcCcc-ccceeeccHHHHHHHhccCCCCc---------ccc---------
Confidence 54 321 1111223457899855 585531 11 26888888887665532110000 000
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 466 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I 466 (632)
.+| |.+ |.....+. .++|+.+.+. ..
T Consensus 304 -------------~~T--~~g------------~Pla~aaa------------------------~aaL~~l~~~---~~ 329 (422)
T PRK05630 304 -------------GPT--FMA------------NPLACAVA------------------------HASLEIIETG---MW 329 (422)
T ss_pred -------------CCC--CcC------------CHHHHHHH------------------------HHHHHHHHhC---cH
Confidence 111 110 00111111 2667777654 34
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCCh
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
.++++.+.++|.+.|..+.. .|.| +. . .-+|.++++.+.+. .....+.+.+.++||.++..
T Consensus 330 ~~~~~~~g~~l~~~L~~l~~-----~~~v---~~-v-Rg~Gl~~~ie~~~~----~~~~~~~~~~~~~Gl~~~~~----- 390 (422)
T PRK05630 330 RKQVKRIEAELIAGLSPLAH-----LPGV---AD-V-RVLGAIGVVEMEQP----VDMEEATQAAVDHGVWLRPF----- 390 (422)
T ss_pred HHHHHHHHHHHHHHHHHhhc-----CCCe---ee-e-eccccEEEEEECCc----ccHHHHHHHHHHCCeEEEec-----
Confidence 56888888888888876621 1322 11 1 23688888888653 23445666666788887521
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ .+||+.+.+-.|.+||+.+++.|.+.|++
T Consensus 391 -----------------------------------g-~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 391 -----------------------------------G-RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred -----------------------------------C-CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 2 48999999999999999999999988764
No 351
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.56 E-value=3.6e-06 Score=90.34 Aligned_cols=270 Identities=16% Similarity=0.118 Sum_probs=164.1
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.+-|| ++ ...+.--|++.+.++.+ .+..+..+.|+++|.++..+.--+=.++.+.-++.+-..=+++ +..+|++
T Consensus 189 Dqahs-sv---eka~~i~~VklR~l~td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~ 263 (511)
T KOG0628|consen 189 DQAHS-SV---EKACLIAGVKLRALPTD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCRE 263 (511)
T ss_pred Ccccc-hH---HHhHhhcceeEEEeecc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhh
Confidence 44554 34 34455678999999998 4778999999999987643221233344444544444445788 9999999
Q ss_pred CCcEEEEeccccCCC--------CCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccc
Q 006746 300 NDWHILIDACALGPK--------DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPA 371 (632)
Q Consensus 300 ~g~~vlvDaaq~~g~--------~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~ 371 (632)
+|+++.||||-++.. -|.-+ -.+|-+.+..|||+-. =--+..||||++.. +...+ .|+
T Consensus 264 ~glWLHVDAAYAGsa~iCpE~r~l~rGi----e~aDSfn~n~hK~~~v-nfDCs~lWvkd~~~--~~~~~---~vd---- 329 (511)
T KOG0628|consen 264 EGLWLHVDAAYAGSAFICPEFRYLMRGI----EYADSFNFNPHKWLLV-NFDCSPLWVKDGTK--LSRAF---NVD---- 329 (511)
T ss_pred cCEEEEeehhhccccccCHHHHHHhhcc----hhhccccCChhheeEE-eeeeecceeecCce--eeeee---ecC----
Confidence 999999999744311 01112 2468999999996543 23578899998742 21111 000
Q ss_pred ccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhh
Q 006746 372 KKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIE 451 (632)
Q Consensus 372 ~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 451 (632)
+.+..++ . ....++|-- ..+|.-..+
T Consensus 330 --p~yL~h~--------------~---~~~~~Dyrh-----------wqipl~rRf------------------------ 355 (511)
T KOG0628|consen 330 --PLYLKHA--------------Y---QGSAPDYRH-----------WQIPLGRRF------------------------ 355 (511)
T ss_pred --hHhhcch--------------h---hccCCCccc-----------cccccccch------------------------
Confidence 0000000 0 000000000 001111111
Q ss_pred hhHHHHHH---hhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHH
Q 006746 452 CRGLDQVD---SLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQ 528 (632)
Q Consensus 452 ~~aLd~~~---~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~ 528 (632)
++|+.+- ..|.+++++|+|.=.+. -+...++-+.. +.++|..+. .-+.|+|.+.+.+- +...+.+
T Consensus 356 -RSLKlWfv~R~~Gve~lq~~iR~h~~L-a~~fe~lv~~d----~~FE~~~~~----~lgLvcFRlk~~N~--~ne~Ll~ 423 (511)
T KOG0628|consen 356 -RSLKLWFVLRSYGVENLQNYIREHVRL-AKEFETLVRAD----PRFEIVNKR----ILGLVCFRLKGDNE--INEALLN 423 (511)
T ss_pred -hhHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHhhcC----Ccceeeccc----ccceeEEeecCCcH--HHHHHHH
Confidence 5677553 36999999988765542 33344444433 778887664 46899999998643 5666777
Q ss_pred HHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHH
Q 006746 529 KLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVA 607 (632)
Q Consensus 529 kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~ 607 (632)
++-...+|.+.... -.+.-++|... ...+|.+||+.-|..|.
T Consensus 424 ~in~~g~i~l~~~~-------------------------------------l~gk~vlRf~V~s~~t~~~di~~a~~~I~ 466 (511)
T KOG0628|consen 424 RLNSSGRIHLVPAS-------------------------------------LHGKFVLRFAVCSPLTNESDIDEAWKIIF 466 (511)
T ss_pred HHHhcCcEEEEEee-------------------------------------ecceEEEEEEecCCCCcHHHHHHHHHHHH
Confidence 77777777775221 11334889886 67899999999999998
Q ss_pred Hhhhh
Q 006746 608 QFLDA 612 (632)
Q Consensus 608 ~~l~~ 612 (632)
+..+.
T Consensus 467 ~~a~~ 471 (511)
T KOG0628|consen 467 EAADE 471 (511)
T ss_pred HHHHH
Confidence 77655
No 352
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.55 E-value=6.9e-05 Score=83.39 Aligned_cols=351 Identities=14% Similarity=0.172 Sum_probs=182.0
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..++ |--.+.+++++.+.+.... . .+.. ....+...+.-++++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~---~-----------------~~~~----~~~~~~~~~lae~L~ 92 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGL---P-----------------LHTL----DLTTPLKDAFIEALL 92 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhcc---C-----------------cccc----ccCcHHHHHHHHHHH
Confidence 57889998544 5666778887765443210 0 0000 001233345566777
Q ss_pred HHcCCCCCCccEEE-eCCHHHHHHHHHhhC-CCCCCCeEE-EeccccchhhHHHHHHHH----hcCC-----EEEEEecc
Q 006746 181 DFLNISENDYGMVF-TANRTSAFKLLAESY-PFMSVKNLL-TVYDYESEAVEAMIRTSE----KRGA-----RVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~~ey~vvf-t~naT~al~lv~~sl-~~~~gd~il-t~~d~~s~~v~~~~~~a~----~~G~-----~v~~v~~~ 248 (632)
+++.-....+.++| ++++|+|...+++-- .+....+|+ +...||......+. ... +.+. .+..++..
T Consensus 93 ~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s-~t~~~~~~~~~~~~~~~~~~~~~~ 171 (442)
T TIGR00709 93 NIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALA-VTGNLFAKNAVGMLMPGVQFMPYP 171 (442)
T ss_pred HhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHh-hcCChhhhccCCCCCCCcEEeCCC
Confidence 77642111135555 589999988765432 122233465 45577763333321 111 1111 13333331
Q ss_pred CCcccc--------CH----HHHHHHHHhcCcCCCceeEEEEeccCCCCcccc-chH----HHHHHhhCCcEEEEecccc
Q 006746 249 WPRLRI--------NS----EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-PYL----WMRIAQENDWHILIDACAL 311 (632)
Q Consensus 249 ~~~~~i--------~~----~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~-pl~----i~~~a~~~g~~vlvDaaq~ 311 (632)
..... +. +.+++.+.........+..|++--+....|... |-+ +.++|+++|+++++|-+|.
T Consensus 172 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t 250 (442)
T TIGR00709 172 -HEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA 250 (442)
T ss_pred -ccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 11111 11 123334432100112345555555666667664 433 5678999999999999876
Q ss_pred C-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 312 G-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 312 ~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
+ |.. +-...--...||.+++ =|.+|. -.-+|++.++++ +..+.+...+
T Consensus 251 GfGRtG~~~a~~~~gv~PDiv~~--gK~l~~-G~Pigav~~~~~-~~~~~~~~~~------------------------- 301 (442)
T TIGR00709 251 GFGRSGTMFAFEHAGIEPDFVVM--SKAVGG-GLPLAVLLIAPE-FDAWQPAGHT------------------------- 301 (442)
T ss_pred CCCCCCchhHHHHcCCCCcEEEE--cccccC-CcccEEEEEchH-HhccCCCcCC-------------------------
Confidence 4 321 1111112347898884 684442 112788888876 3333211100
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
+| |.+ |.....+. .+.|+.+++. .+.+
T Consensus 302 ------------~T--~~g------------npla~aaa------------------------~a~L~~i~~~---~l~~ 328 (442)
T TIGR00709 302 ------------GT--FRG------------NQLAMVTG------------------------TEALNYWKDD---NLAQ 328 (442)
T ss_pred ------------CC--CCc------------CHHHHHHH------------------------HHHHHHHHhc---CHHH
Confidence 00 000 00001111 1566666543 4567
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc-----c--C---HHHHHHHHHhCCcEE
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-----I--E---PVLVQKLADRENISL 538 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~-----i--~---~~~V~kla~~~gI~l 538 (632)
+.+.+.++|.+.|.++.... |.| +. . .-+|.++++.+.+..... . + ...+.+.+-++||.+
T Consensus 329 ~~~~~g~~l~~~L~~l~~~~----~~v---~~-v-rG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~ 399 (442)
T TIGR00709 329 NAQERGERITSFLDDMIKEH----PCI---GN-V-RGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLL 399 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCe---ee-e-eccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEE
Confidence 88888999999998873211 322 11 1 235777777775421100 0 1 223444445678776
Q ss_pred ccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 539 SYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 539 r~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+ .....+||+.+.+..|.+||+.+++.+.+.|..
T Consensus 400 ~~~--------------------------------------~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 400 ETG--------------------------------------GREGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred eec--------------------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 521 112359999999999999999999999998865
No 353
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.54 E-value=5.5e-05 Score=84.64 Aligned_cols=354 Identities=15% Similarity=0.175 Sum_probs=186.3
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.+.... + ++ .. . + ..+...+.-+++.
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~---~-------~~-------~~--~--~---~~~~~~~la~~L~ 116 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADEL---P-------LH-------TL--D--L---TTPVKDQFVQDLF 116 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhh---c-------cc-------cc--c--c---CCHHHHHHHHHHH
Confidence 67889997443 5556778887765442110 0 00 00 0 0 1122223444555
Q ss_pred HHcCCCC-CCccEEEe-CCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHHHH----hc--C---CEEEEEec
Q 006746 181 DFLNISE-NDYGMVFT-ANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRTSE----KR--G---ARVMSAEF 247 (632)
Q Consensus 181 ~~l~a~~-~ey~vvft-~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~a~----~~--G---~~v~~v~~ 247 (632)
+++.-.- ....++|+ +++|+|...+++--.-.+|+ +|++ ...||......+ .... +. + -.+..+|+
T Consensus 117 ~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~al-s~t~~~~~~~~~~~~~~~~~~~~~ 195 (464)
T PRK06938 117 ASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGAL-SLMGNLGPKKPLGALLPGVQFLPY 195 (464)
T ss_pred HhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHH-hhcCCccccccCCCCCCCcEEeCC
Confidence 5543210 01246676 68999888765532111344 4664 456776333222 1110 00 0 12344554
Q ss_pred cCCc----c-------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc
Q 006746 248 SWPR----L-------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL 311 (632)
Q Consensus 248 ~~~~----~-------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~ 311 (632)
.... + ..+.+.+++.|.+.......+..|++--+....|.+.| ++ +-++|+++|+++|+|-+|.
T Consensus 196 p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t 275 (464)
T PRK06938 196 PYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS 275 (464)
T ss_pred CccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 2110 0 01246677777542111124666777667667788766 33 4578999999999999876
Q ss_pred C-CCC--CCCCCCCCCCCcEEEEccccccC-CCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCC
Q 006746 312 G-PKD--MDSFGLSLVRPDFLICSFYQIFG-ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETE 387 (632)
Q Consensus 312 ~-g~~--m~~ldls~~~~Df~~~S~hK~~G-~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e 387 (632)
+ |.. |-..+.-...||+++++ |.+| ..| +|+++.+++. +.+.+...+++ |
T Consensus 276 GfGRtG~~~a~e~~gv~PDiv~~g--KglggG~P--lsAv~~~~~~-~~~~~~~~~~T----------~----------- 329 (464)
T PRK06938 276 GFGRTGKMFAFEHAGIIPDVVVLS--KAIGGSLP--LAVVVYREWL-DTWQPGAHAGT----------F----------- 329 (464)
T ss_pred CCCcCcHHHHHHhcCCCCCEEEee--ccccCCCc--eEEEeehhHh-hccCCCCCCCC----------C-----------
Confidence 4 321 11111123479999985 7333 223 7888888763 33322111100 0
Q ss_pred ccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHH
Q 006746 388 PEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMIS 467 (632)
Q Consensus 388 ~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~ 467 (632)
.| .+++. ..+ .+.|+.+.+ +.+.
T Consensus 330 ------------~g-----npla~------------Aaa-------------------------~a~L~~l~~---~~l~ 352 (464)
T PRK06938 330 ------------RG-----NQMAM------------AAG-------------------------SATLRYIKE---HRLA 352 (464)
T ss_pred ------------Cc-----CHHHH------------HHH-------------------------HHHHHHHHH---hHHH
Confidence 00 01110 111 145555544 4567
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc-------cC---HHHHHHHHHhCCcE
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-------IE---PVLVQKLADRENIS 537 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~-------i~---~~~V~kla~~~gI~ 537 (632)
+|++.+.++|.+.|.+|.-.. |.| +. -.-+|-++.+.+.+..+.. .+ ...+.+.+-++||.
T Consensus 353 ~~~~~~G~~l~~~L~~l~~~~----~~i---~~--VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll 423 (464)
T PRK06938 353 EHAAAMGERLREHLRQLQRDY----PQL---GD--VRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLI 423 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCe---ee--eeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeE
Confidence 899999999999998873111 322 11 0235667777765322210 01 12233334457777
Q ss_pred EccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhcccc
Q 006746 538 LSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVE 616 (632)
Q Consensus 538 lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f~~ 616 (632)
++.+ +....+||+.+.+..|.+||+.+++.+.+.|.. +|.
T Consensus 424 ~~~~--------------------------------------g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~-~~~ 463 (464)
T PRK06938 424 LELG--------------------------------------GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA-AVA 463 (464)
T ss_pred Eeec--------------------------------------CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH-Hhc
Confidence 6521 001258999999999999999999999998864 443
No 354
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=98.54 E-value=1.1e-05 Score=85.61 Aligned_cols=174 Identities=16% Similarity=0.172 Sum_probs=119.5
Q ss_pred HHHHHHHHHcC--------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDFLN--------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~l~--------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
..|+.+|+|+. .+|+ .||.|+++|.|+++++-.+ -.||+.+|+++-|... |-+.+.-+.|++++.+
T Consensus 125 ~frqa~A~Fm~~~r~~~v~fdP~--~~Vv~~G~T~ane~l~fcL-adpgdafLvPtPyY~g---fdrdl~~rTgveivpv 198 (471)
T KOG0256|consen 125 SFRQAVAEFMERARGNRVKFDPE--RVVVTNGATSANETLMFCL-ADPGDAFLVPTPYYPG---FDRDLRWRTGVEIVPV 198 (471)
T ss_pred HHHHHHHHHHHHHhCCCCccCcc--ceEEecccchhhHHHHHHh-cCCCceeeecCCCCCc---ccccceeccCceEEEE
Confidence 45666666653 2455 6999999999999999988 4799997766544331 2234445679999888
Q ss_pred eccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HH---HHHhhCCcEEEEeccccC---CC-C-
Q 006746 246 EFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WM---RIAQENDWHILIDACALG---PK-D- 315 (632)
Q Consensus 246 ~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~---~~a~~~g~~vlvDaaq~~---g~-~- 315 (632)
.... .+.+++.+.|+.++.+..+...+++=+.++-.||+-|+.++-+ +. ..|+++++++++|-.-++ +. .
T Consensus 199 ~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F 278 (471)
T KOG0256|consen 199 HCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEF 278 (471)
T ss_pred EeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCc
Confidence 7653 3457899999999887654456778889999999999999866 54 567889999999974222 11 0
Q ss_pred --CCC-CCCCCCCCc--EEEEccccccCCCCCceEEEEEeCCC
Q 006746 316 --MDS-FGLSLVRPD--FLICSFYQIFGENPSGFGCLFVKKST 353 (632)
Q Consensus 316 --m~~-ldls~~~~D--f~~~S~hK~~G~~P~G~G~L~Vr~~~ 353 (632)
+.. ...-...+| -++.|.-|=||.|.--+|++|-.++-
T Consensus 279 ~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~ 321 (471)
T KOG0256|consen 279 RSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNED 321 (471)
T ss_pred eEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChH
Confidence 000 000001233 57889999999743345888876653
No 355
>PRK07483 hypothetical protein; Provisional
Probab=98.53 E-value=5.8e-05 Score=83.99 Aligned_cols=358 Identities=11% Similarity=0.104 Sum_probs=190.3
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++.|||..+ .|--.+.+++++.+.++... |... .. + ..+...+.-++++
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~------~~~~---------~~------~---~~~~~~~lae~L~ 83 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLA------YAHT---------SF------F---TTEPAEALADRLV 83 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhcc------Cccc---------cc------c---CCHHHHHHHHHHH
Confidence 6788999865 45666777877765443210 0000 00 0 1233345666777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEEE-eccccchhhHHHHHHH------HhcC---CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLLT-VYDYESEAVEAMIRTS------EKRG---ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~ilt-~~d~~s~~v~~~~~~a------~~~G---~~v~ 243 (632)
+++... -..|.|++++|+|...+++--. + ++++ +|++ ...||......+. .. +..+ ..+.
T Consensus 84 ~~~p~~--~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s-~s~~~~~~~~~~p~~~~~~ 160 (443)
T PRK07483 84 AAAPAG--LEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALA-IGGNAWRREPFAPLLIEAH 160 (443)
T ss_pred HhCCCC--CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhh-hcCCcccccccCCCCCCCE
Confidence 765322 1279999999998887654321 1 1333 4664 5577764332221 10 0001 1122
Q ss_pred EEeccCCcccc------------CHHHHHHHHHhcCcCCCceeEEEEeccCC-CCccccc----hH-HHHHHhhCCcEEE
Q 006746 244 SAEFSWPRLRI------------NSEKLRKMVVSKGKKKKQRGLFVFPLHSR-MTGARYP----YL-WMRIAQENDWHIL 305 (632)
Q Consensus 244 ~v~~~~~~~~i------------~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn-~TG~~~p----l~-i~~~a~~~g~~vl 305 (632)
.++........ ..+++++.+.... ...+..|++--+.- ..|...| ++ +.++|+++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI 238 (443)
T PRK07483 161 HVSPCYAYREQRAGESDEAYGQRLADELEAKILELG--PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLI 238 (443)
T ss_pred EeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC--CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEE
Confidence 33321100000 1245666564211 13456666665553 4577776 55 6788999999999
Q ss_pred EeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccC
Q 006746 306 IDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 306 vDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
+|-+|.+ |.. +-....-...||+++++ |-+|..-.-+|++.+++++++.+.+.. +. +. +
T Consensus 239 ~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~--~~----------~~-h--- 300 (443)
T PRK07483 239 LDEVMCGMGRTGTLFACEEDGVAPDLVTIA--KGLGAGYQPIGAVLASDRIYDAIADGS--GF----------FQ-H--- 300 (443)
T ss_pred EecceeCcccCcHHHHHhhcCCCCCeeeeh--hhhccCccccEEEEEcHHHHHHHhcCC--Cc----------cc-c---
Confidence 9998774 321 11111123479988884 744421002899999988766553210 00 00 0
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
.+|.. -.+++. ..+ .+.|+.+++
T Consensus 301 -----------------~~T~~-gnpl~~------------aaa-------------------------~a~l~~i~~-- 323 (443)
T PRK07483 301 -----------------GHTYL-GHATAC------------AAA-------------------------LAVQRVIAE-- 323 (443)
T ss_pred -----------------CCCCC-CCHHHH------------HHH-------------------------HHHHHHHHh--
Confidence 01100 001110 111 256666655
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCC--CccC-----HHHHHHHHHhC
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADRE 534 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G--~~i~-----~~~V~kla~~~ 534 (632)
+.+.+|++.+.++|.+.|+++.... |.| .| .-+|.++.+.+.+..+ +..+ ...+.+.+-++
T Consensus 324 -~~l~~~~~~~g~~l~~~L~~l~~~~----~~i~~v------RG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (443)
T PRK07483 324 -DGLLANVRARGEQLRARLRERLGQH----PHVGDI------RGRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR 392 (443)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHhcC----CCeeeE------eecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC
Confidence 4567888888888888887652111 322 11 1356777777653221 1111 13445555568
Q ss_pred CcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 535 NISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 535 gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
||.++....+ . ......+||+.+-+..|.+||+.+++.|.+.|..
T Consensus 393 Gll~~~~~~~---------------------------~------~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 393 GLMVYPMGGT---------------------------I------DGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred CcEEEecCcc---------------------------c------cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 8887531000 0 0111258999999999999999999999998864
No 356
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.52 E-value=2.7e-05 Score=87.06 Aligned_cols=351 Identities=10% Similarity=0.105 Sum_probs=190.7
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..+. |--.+.+.+++.+.+.... .. .+. +. ..+...+.-++|+
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~--------~~---------~~~------~~-~~~~~~~lae~L~ 109 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIA--------HS---------TLL------GL-ANVPSILLAEKLI 109 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCC--------Cc---------ccc------cc-CCHHHHHHHHHHH
Confidence 67889997653 6667778887765443210 00 000 00 1233346677777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCC-eEE-EeccccchhhHHHHHHHHh----c--C---CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVK-NLL-TVYDYESEAVEAMIRTSEK----R--G---ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd-~il-t~~d~~s~~v~~~~~~a~~----~--G---~~v~ 243 (632)
+++... -..+.|++++|+|...+++--. + .+|+ +|+ ....||......| .+... . + ..+.
T Consensus 110 ~~~p~~--~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~al-s~s~~~~~~~~~~~~~~~~~ 186 (460)
T PRK06916 110 EVVPEG--LKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAV-SVGAIDLFHQVYSSLLFEAI 186 (460)
T ss_pred HhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhH-hccCCcccccccCCCCCCCE
Confidence 776432 1379999999998887655321 1 2333 465 4456776433222 11100 0 0 1123
Q ss_pred EEeccC----Ccc-c------cCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccc-hH----HHHHHhhCCcEEEE
Q 006746 244 SAEFSW----PRL-R------INSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYP-YL----WMRIAQENDWHILI 306 (632)
Q Consensus 244 ~v~~~~----~~~-~------i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~p-l~----i~~~a~~~g~~vlv 306 (632)
.+|... +.+ . .+.+.+++.|... ...+..|.+-- +....|...| -+ +.++|+++|+++++
T Consensus 187 ~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~ 263 (460)
T PRK06916 187 KMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK---HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFIT 263 (460)
T ss_pred EeCCCcccccccCCChHHHHHHHHHHHHHHHHhC---CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEe
Confidence 333210 000 0 1245566667532 23456666655 4666787764 22 45679999999999
Q ss_pred eccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 307 DACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 307 Daaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
|-+|.+ |.. +--.+.-...||++++ =|-+|..-.-+|++.+++++++.+.+.... . ..++
T Consensus 264 DEV~TG~GRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~-~-------~~~~------- 326 (460)
T PRK06916 264 DEVATGFGRTGKMFACEHENVTPDIMTA--GKGLTGGYLPIAITVTTDEIYNAFYGDYEE-Q-------KTFF------- 326 (460)
T ss_pred echhhCCCcCchhhHHHhcCCCCCeeee--ehhhhcCccccceeeecHHHHHHhhccccc-c-------Cccc-------
Confidence 998764 321 1111122347998876 584442101289999998876544321100 0 0000
Q ss_pred CCCCccccchhhhhhhccccCCC-ccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 384 CETEPEQTSKSKQEKVAATNTFS-GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~-~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
..+| |. .+++ ...+ .+.|+.+.+.
T Consensus 327 ---------------~~~T--~~gnpl~------------~aaa-------------------------~a~l~~l~~~- 351 (460)
T PRK06916 327 ---------------HGHS--YTGNPLG------------CAVA-------------------------LANLELYEKT- 351 (460)
T ss_pred ---------------cCCC--CCCCHHH------------HHHH-------------------------HHHHHHHHhc-
Confidence 0111 11 0111 0111 2566666653
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC--CccC-----HHHHHHHHHhCC
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADREN 535 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G--~~i~-----~~~V~kla~~~g 535 (632)
.+.+|++.+.++|.+.|.+|.- . |.| +. -.-+|.++.+.+.+... +... ...+.+.+.++|
T Consensus 352 --~l~~~~~~~g~~l~~~l~~l~~-~----~~v---~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~G 419 (460)
T PRK06916 352 --NLIEQVARKTEYVATQLEDLFA-L----KHV---GD--IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELG 419 (460)
T ss_pred --cHHHHHHHHHHHHHHHHHHhhc-C----CCe---EE--eecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCC
Confidence 4668899999999999988731 1 322 11 12356777776653211 1111 124445555677
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|.++. .+ .++|+.+.+..|.+||+.+++.+.+.|+.
T Consensus 420 vl~~~----------------------------------------~g-~~l~~~Ppl~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 420 MLTRP----------------------------------------LG-NTIVFMPPLASTIDELDEMLRILYKAISD 455 (460)
T ss_pred eEEEe----------------------------------------cC-CEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 77641 01 48999999999999999999999998864
No 357
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.52 E-value=3.6e-05 Score=86.17 Aligned_cols=207 Identities=15% Similarity=0.191 Sum_probs=118.4
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|+|+.+. |--.+.+.+++.+.+.... .| +.+ .+...+.-++|.
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~-----------~~------~~~----------~~~~~~lAe~l~ 149 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT-----------SF------GAP----------CLLENVLAEMVI 149 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC-----------CC------CCC----------CHHHHHHHHHHH
Confidence 57889998653 3445777877665443210 01 111 123334555666
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHHHH----------hcCC------EE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRTSE----------KRGA------RV 242 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~a~----------~~G~------~v 242 (632)
+.+.. -..|.|++++|+|...+.+--.--.|+ +|+. ...||. ...++..... ..|. .+
T Consensus 150 ~~~p~---~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 225 (474)
T PLN02482 150 DAVPS---VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHG-HADSFLVKAGSGVATLGLPDSPGVPKAATSAT 225 (474)
T ss_pred HhCCC---CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCC-CcchhhhhcCCCccccCCCCCCCCCCCCCCCe
Confidence 66532 127999999999988765432211344 4664 446775 2222211100 0010 11
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch----H-HHHHHhhCCcEEEEeccccCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY----L-WMRIAQENDWHILIDACALGPKDMD 317 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl----~-i~~~a~~~g~~vlvDaaq~~g~~m~ 317 (632)
..+|. -|++.+++.|... ...+..|++..+....|.+.|. + +.++|+++|+++++|-++.+ .-..
T Consensus 226 ~~~~~------nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tG-fR~g 295 (474)
T PLN02482 226 LTAPY------NDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTG-FRIA 295 (474)
T ss_pred EEecC------CChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC-eecC
Confidence 11111 1578888888643 2356788888888888988874 3 67889999999999998753 1001
Q ss_pred CCC---CCCCCCcEEEEccccccCC-CCCceEEEEEeCCCccccC
Q 006746 318 SFG---LSLVRPDFLICSFYQIFGE-NPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 318 ~ld---ls~~~~Df~~~S~hK~~G~-~P~G~G~L~Vr~~~~~~L~ 358 (632)
... .-...||++++ =|.+|. .| +|++..+++.++.+.
T Consensus 296 ~~ga~~~~gv~PDi~t~--gK~lggG~P--igav~g~~ei~~~~~ 336 (474)
T PLN02482 296 YGGAQEYFGITPDLTTL--GKVIGGGLP--VGAYGGRREIMEMVA 336 (474)
T ss_pred cchHhHHhCCCCCEEEe--cchhhCCCc--eEEEEEcHHHHHhhc
Confidence 111 11236898654 685542 13 788888888876554
No 358
>PRK06917 hypothetical protein; Provisional
Probab=98.50 E-value=0.00016 Score=80.50 Aligned_cols=358 Identities=12% Similarity=0.103 Sum_probs=188.5
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||+.+. |--.+.+.+++.+.+... + + ... +. ...+...+.-++++
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~----~--~------------~~~-~~-----~~~~~~~~lae~L~ 84 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEV----S--F------------VYR-SQ-----FTSEPAEKLAKKLS 84 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhC----c--C------------ccc-cc-----cCCHHHHHHHHHHH
Confidence 67889998644 555677888776544321 0 0 000 00 01234456777777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC------CCCCCC-eEEE-eccccchhhHHHHHHHHhcCC---------EEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY------PFMSVK-NLLT-VYDYESEAVEAMIRTSEKRGA---------RVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl------~~~~gd-~ilt-~~d~~s~~v~~~~~~a~~~G~---------~v~ 243 (632)
+++... ...+.|+.++|+|...+++-- .-.+|+ +|+. ...||......|. .....+. .+.
T Consensus 85 ~~~p~~--~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~ 161 (447)
T PRK06917 85 DLSPGD--LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALS-MSGHPLRRQRFVSLLEDYP 161 (447)
T ss_pred HhCCCC--CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHH-hcCCccccccCCCCCCCCe
Confidence 776432 236899999999888766532 111333 4654 4567764333332 1110000 112
Q ss_pred EEeccCCc----cc-------cCHHHHHHHHHhcCcCCCceeEEEEeccCC-CCccccc----hH-HHHHHhhCCcEEEE
Q 006746 244 SAEFSWPR----LR-------INSEKLRKMVVSKGKKKKQRGLFVFPLHSR-MTGARYP----YL-WMRIAQENDWHILI 306 (632)
Q Consensus 244 ~v~~~~~~----~~-------i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn-~TG~~~p----l~-i~~~a~~~g~~vlv 306 (632)
.++..... +. -+.+.+++.|+... ...+..|++.-+.. .-|...| ++ +.++|+++|+++++
T Consensus 162 ~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~ 239 (447)
T PRK06917 162 TISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIA 239 (447)
T ss_pred EeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEE
Confidence 22211000 00 02355666665321 12456666655544 4456665 33 45779999999999
Q ss_pred eccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 307 DACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 307 Daaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
|-++.+ |.. +-....-...||++++ =|.+|..-.-+|++.++++.++.+.+.. +. ++
T Consensus 240 DEv~tGfGRtG~~~a~~~~gv~PDi~~~--gK~l~~G~~Pi~a~~~~~~i~~~~~~~~--~~---------~~------- 299 (447)
T PRK06917 240 DEVMTGLGRTGAMFAMEHWGVEPDIMTL--GKGLGAGYTPIAATVVSDRVMEPILRGS--RS---------IM------- 299 (447)
T ss_pred echhhCcCcccchhhHHhcCCCCCEEEe--eehhccCCcceEEEEEcHHHHHHHhccC--cc---------cc-------
Confidence 998763 210 1011112336898766 5855521001788888888765443210 00 00
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCH
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 463 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl 463 (632)
..+|..- .+++ ..+. .+.|+.+++.
T Consensus 300 ---------------~~~T~~g-npl~-------------~aaa------------------------~a~l~~l~~~-- 324 (447)
T PRK06917 300 ---------------SGHTLSA-NPLS-------------AATA------------------------LAVLEYMEKH-- 324 (447)
T ss_pred ---------------cccCCCC-CHHH-------------HHHH------------------------HHHHHHHHHC--
Confidence 0111000 0111 1111 2566666543
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCC--CCccC-----HHHHHHHHHhCC
Q 006746 464 TMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWK--REKIE-----PVLVQKLADREN 535 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~--G~~i~-----~~~V~kla~~~g 535 (632)
.+.+|++.+.++|++.|.++.-.. |.+ .+ .-+|.++.+.+.+.. .+... ...+.+.+.++|
T Consensus 325 -~l~~~~~~~g~~l~~~L~~l~~~~----~~i~~v------rG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 393 (447)
T PRK06917 325 -NLPEKAAEKGEYLIKGLQKVQQQS----TIIGDV------RGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNG 393 (447)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHhcC----CCEEEE------eecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCC
Confidence 467888889999999988874211 322 11 235677777764311 11111 223444455678
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|.++..... . ......+||+++.+..|.+||+.+++.+.+.|+.
T Consensus 394 vl~~~~~~~---------------------------~------~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 394 LLLYPAVAG---------------------------Q------DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred cEEEecccc---------------------------c------CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 887532000 0 0112358999999999999999999999998865
No 359
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=98.50 E-value=2.2e-06 Score=91.21 Aligned_cols=171 Identities=12% Similarity=0.129 Sum_probs=123.6
Q ss_pred hHHHHHHHHHHHHHcCC--CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 169 SGLESAMKKRIMDFLNI--SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a--~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.++.+..+++++++.|. .++ .+|..|.++.++|-....++ +.+||+|++..-+.-...+ +. +-.|..++.++
T Consensus 72 p~L~~aL~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l-~~~GDeVii~eP~fd~Y~~-~~---~maG~tpv~v~ 145 (420)
T KOG0257|consen 72 PQLRKALAKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGL-LNPGDEVIVFEPFFDCYIP-QV---VMAGGTPVFVP 145 (420)
T ss_pred hHHHHHHHHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHH-cCCCCEEEEecCcchhhhh-HH---hhcCCcceeec
Confidence 36777888888888775 333 37999999999999888888 7899997654322221332 23 34688999998
Q ss_pred cc-------CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEecc-ccC--
Q 006746 247 FS-------WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDAC-ALG-- 312 (632)
Q Consensus 247 ~~-------~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaa-q~~-- 312 (632)
.. .++..+|.++++.+++++| +++++.--+|+||..++ |+ |+++|+++|++++.|-+ ...
T Consensus 146 ~~~~~g~~~s~~~~~D~~~le~~~t~kT------k~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~ 219 (420)
T KOG0257|consen 146 LKPKEGNVSSSDWTLDPEELESKITEKT------KAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVY 219 (420)
T ss_pred cccccccccCccccCChHHHHhhccCCc------cEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhh
Confidence 76 4567789999999999865 99999999999999997 66 88999999999999975 222
Q ss_pred -CCCCCCC-C-CCCCCCcEEEEccccccCCCCCceEEEEEeC
Q 006746 313 -PKDMDSF-G-LSLVRPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 313 -g~~m~~l-d-ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
|.++..+ . -..+..-.-+.|+-|.||+..--+|-++..+
T Consensus 220 d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~ 261 (420)
T KOG0257|consen 220 DGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK 261 (420)
T ss_pred CCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH
Confidence 3211221 0 1224456778999999995423357766633
No 360
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.47 E-value=0.0001 Score=81.82 Aligned_cols=76 Identities=12% Similarity=0.057 Sum_probs=50.7
Q ss_pred HHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc----chH-HHHHHhhCCcEEEEecccc-CCCC--CCCCCCCCCCCc
Q 006746 256 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY----PYL-WMRIAQENDWHILIDACAL-GPKD--MDSFGLSLVRPD 327 (632)
Q Consensus 256 ~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~----pl~-i~~~a~~~g~~vlvDaaq~-~g~~--m~~ldls~~~~D 327 (632)
.+++++.+... ..++..|++..+....|.+. .++ +.++|+++|+++++|-+|. +|.. +-..+.....||
T Consensus 205 l~~~~~~~~~~---~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PD 281 (431)
T TIGR03251 205 LRQARAAFAER---PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPD 281 (431)
T ss_pred HHHHHHHHHhC---CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCC
Confidence 34455566532 24678888888888889886 355 6788999999999999987 3431 101122234799
Q ss_pred EEEEccc
Q 006746 328 FLICSFY 334 (632)
Q Consensus 328 f~~~S~h 334 (632)
+++++=.
T Consensus 282 i~~~gK~ 288 (431)
T TIGR03251 282 IVAFGKK 288 (431)
T ss_pred EEEeccc
Confidence 9986533
No 361
>PRK07046 aminotransferase; Validated
Probab=98.45 E-value=6.6e-05 Score=83.75 Aligned_cols=166 Identities=11% Similarity=0.092 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEEE-eccccchhhHHHHHHHH-----hc---CC
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLLT-VYDYESEAVEAMIRTSE-----KR---GA 240 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~ilt-~~d~~s~~v~~~~~~a~-----~~---G~ 240 (632)
...+.-++|.+.+++ + .|.|++++|+|...+.+--.--.|+ +|+. ...||......+..... +. |.
T Consensus 116 ~~~~lAe~l~~~~~~--~--~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 116 DAAWVGEELARRFGL--P--YWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred HHHHHHHHHHHHhCC--C--EEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 334566677777753 2 6999999999888765432211344 4664 44577522112211100 00 11
Q ss_pred ------EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecc
Q 006746 241 ------RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 241 ------~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaa 309 (632)
.+..++. -|.+.+++.+.. ..+..|++--+....|...| ++ +.++|+++|+++++|-+
T Consensus 192 ~~~~~~~~~~~~~------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV 260 (453)
T PRK07046 192 VHDLTATTRVVEF------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDET 260 (453)
T ss_pred CccccCceEeeCC------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 1111111 167888888842 24677777777777788877 56 77899999999999998
Q ss_pred cc----CCCCCCCCCCCCCCCcEEEEccccccC-CCCCceEEEEEeCCCccccC
Q 006746 310 AL----GPKDMDSFGLSLVRPDFLICSFYQIFG-ENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 310 q~----~g~~m~~ldls~~~~Df~~~S~hK~~G-~~P~G~G~L~Vr~~~~~~L~ 358 (632)
+. .|.-....+ ..||++++ =|.+| ..| +|++..+++.++.+.
T Consensus 261 ~tfr~g~Gg~~~~~g---v~PDi~t~--gK~lggG~P--i~av~g~~~i~~~~~ 307 (453)
T PRK07046 261 HTISSGPGGYTRAHG---LEPDFLVV--GKPIAGGVP--CAVYGFSAELAERAQ 307 (453)
T ss_pred ccCccCCcchhHHhC---CCccceee--hhhhcCCCc--ceeeeehHHHHHHHh
Confidence 75 221111233 36898875 58443 223 788899988876554
No 362
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.44 E-value=0.0001 Score=81.72 Aligned_cols=169 Identities=15% Similarity=0.130 Sum_probs=101.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHHHHHh----------cCC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIRTSEK----------RGA 240 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~~a~~----------~G~ 240 (632)
.+.-+++.+.+. .-..+.|+.++|+|...+.+--. +....+|+ ....||.. ..+....... .|.
T Consensus 96 ~~la~~l~~~~p---~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~-t~~~~~~~~~~~~~~~~~~~~~~ 171 (428)
T PRK12389 96 IEFAKMLKEAIP---SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGH-SDLVLVAAGSGPSTLGTPDSAGV 171 (428)
T ss_pred HHHHHHHHHhCC---CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCC-hHHHHHhcCCcccccCCCCCCCC
Confidence 456666666653 12379999999999887665321 22233465 44567763 2222111100 010
Q ss_pred ------EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecc
Q 006746 241 ------RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 241 ------~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaa 309 (632)
.+..+|. -|.+.+++.|.... ..+..|++.-+....|.+.| ++ +.++|+++|+++++|-+
T Consensus 172 ~~~~~~~~~~~~~------~d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV 242 (428)
T PRK12389 172 PKSIAQEVITVPF------NDIEALKEALDKWG---DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEV 242 (428)
T ss_pred CCcccCceEEcCC------CCHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 1111111 15788888886432 34677888778888899998 88 89999999999999998
Q ss_pred ccCC-CC-CCCCCCCCCCCcEEEEccccccCC-CCCceEEEEEeCCCccccC
Q 006746 310 ALGP-KD-MDSFGLSLVRPDFLICSFYQIFGE-NPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 310 q~~g-~~-m~~ldls~~~~Df~~~S~hK~~G~-~P~G~G~L~Vr~~~~~~L~ 358 (632)
|.+- .. +.....-...||++++ =|.+|. .| +|++..+++.++.+.
T Consensus 243 ~tG~Rt~~~~a~~~~gv~PDivt~--gK~lggG~P--i~av~~~~~i~~~~~ 290 (428)
T PRK12389 243 ITAFRFMYGGAQDLLGVEPDLTAL--GKIIGGGLP--IGAYGGRKDIMEQVA 290 (428)
T ss_pred ccccccCcchhhHHhCCCCCeeee--chhhcCCCc--eeEEeEHHHHHhhhc
Confidence 8742 10 0000111236898654 584441 12 788888888776553
No 363
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.41 E-value=9.8e-05 Score=82.64 Aligned_cols=351 Identities=15% Similarity=0.141 Sum_probs=189.6
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+.+++.+.+... + + .+.. + ...+...+.-+++.
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l----~--~------------~~~~-----~-~~~~~~~~lae~L~ 100 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQL----E--H------------VILA-----G-FSHEPVIELSERLV 100 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhc----C--C------------cccc-----c-cCCHHHHHHHHHHH
Confidence 67889998644 555677777766544321 0 0 0000 0 01233445666777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CC-----CCCC-eEE-EeccccchhhHHHHHHHH----hc--C---CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PF-----MSVK-NLL-TVYDYESEAVEAMIRTSE----KR--G---ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~-----~~gd-~il-t~~d~~s~~v~~~~~~a~----~~--G---~~v~ 243 (632)
+++... -..|.|++++|+|...+.+-- .+ .+++ +|+ ....||......+. ... +. + ..+.
T Consensus 101 ~~~p~~--~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s-~~~~~~~~~~~~p~~~~~~ 177 (466)
T PRK07030 101 KITPPG--LSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMS-VGDVALFTETYKPLLLDTI 177 (466)
T ss_pred HhCCCC--cCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHh-ccCCccccccCCccCCCCE
Confidence 766422 227999999999888765432 11 1233 465 45567763332221 100 00 0 1123
Q ss_pred EEeccCC----cc-------ccCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccc----hH-HHHHHhhCCcEEEE
Q 006746 244 SAEFSWP----RL-------RINSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYP----YL-WMRIAQENDWHILI 306 (632)
Q Consensus 244 ~v~~~~~----~~-------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~p----l~-i~~~a~~~g~~vlv 306 (632)
.+|.... .+ .-+.+++++.|... ...+..|++-- +....|.+.| ++ +.++|+++|+++++
T Consensus 178 ~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~---~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~ 254 (466)
T PRK07030 178 KVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH---HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIH 254 (466)
T ss_pred EcCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3332210 00 01245567777632 23466666666 5666788776 33 56789999999999
Q ss_pred eccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCC-CCceeecccccccccccccC
Q 006746 307 DACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTS-SGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 307 Daaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~-gG~v~~~~~~~~~~~~~~~~ 382 (632)
|-+|.+ |.. |-..+.-...||+++++ |.+|..-.=+|++.+++++++.+.+... .|. ++
T Consensus 255 DEV~TGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~---------~~------ 317 (466)
T PRK07030 255 DEIAVGFGRTGTMFACEQAGIRPDFLCLS--KALTGGYLPLAAVLTTDTVYQAFYDDYPTLRA---------FL------ 317 (466)
T ss_pred eehhhCcCccccchHHHhcCCCCCEEeee--hhccCCcccceEEEecHHHHHHHhcccccccc---------cc------
Confidence 998764 321 11112223479999984 7443210027999999887654422100 000 00
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
..+| |.+ |.....+. .+.|+.+.+.
T Consensus 318 ----------------h~~T--~~g------------npla~aaa------------------------~a~L~~i~~~- 342 (466)
T PRK07030 318 ----------------HSHS--YTG------------NPLACAAA------------------------LATLDIFEQD- 342 (466)
T ss_pred ----------------cCCC--CCC------------CHHHHHHH------------------------HHHHHHHHhc-
Confidence 0111 110 11111111 1567777653
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC--cc--C---HHHHHHHHHhCC
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE--KI--E---PVLVQKLADREN 535 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~--~i--~---~~~V~kla~~~g 535 (632)
.+.+|.+.+.++|.+.|.++.. . |.|. . -.-+|.++.+.+.+.... .. + ...+.+.+.++|
T Consensus 343 --~l~~~~~~~G~~l~~~L~~l~~-~----~~v~---~--vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~G 410 (466)
T PRK07030 343 --NVIENNRALARRMAEATAHLAD-H----PHVA---E--VRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERG 410 (466)
T ss_pred --CHHHHHHHHHHHHHHHHHHHhc-C----CCEE---E--eEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCC
Confidence 4678899999999999988731 1 3221 1 023567777776532111 00 1 123434444567
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.++. .+ .+||+.+.+-.|.+||+.+++.+.+.|+.
T Consensus 411 vl~~~----------------------------------------~g-~~i~~~Ppl~it~~eid~~~~~l~~al~~ 446 (466)
T PRK07030 411 ALLRP----------------------------------------LG-SVVYFLPPYVITPEQIDFLAEVASEGIDI 446 (466)
T ss_pred eEEEe----------------------------------------cC-CEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 76641 12 48999999999999999999999998876
No 364
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.36 E-value=0.00016 Score=80.72 Aligned_cols=350 Identities=16% Similarity=0.195 Sum_probs=181.7
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||..+. |--.+.+++++.+.+... .+ ++ +.. ...+...+.-+++.
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~---~~-------~~-----~~~---------~~~~~~~~lAe~L~ 111 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSG---LP-------LH-----TLD---------LTTPLKDAFSEYLL 111 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhh---cc-------cc-----ccc---------cCCHHHHHHHHHHH
Confidence 67889998554 556677787766543210 00 00 000 01233345666666
Q ss_pred HHcCCCCCCccEEE-eCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHHHH----Hhc-----CCEEEEEecc
Q 006746 181 DFLNISENDYGMVF-TANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIRTS----EKR-----GARVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~~ey~vvf-t~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~~a----~~~-----G~~v~~v~~~ 248 (632)
+.+......+.++| ++++|+|...+++--. +...++|+ ....||......|. .. .+. ...+..+|..
T Consensus 112 ~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als-~t~~~~~~~~~~~~~~~~~~~~~~ 190 (459)
T PRK06931 112 SLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALA-VTGNLSPKNAVNGLMPGVQFMPYP 190 (459)
T ss_pred HhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHh-hcCCcccccCCCCCCCCcEEeCCC
Confidence 76643211123544 5899998887655321 22233465 44578864333331 11 000 1123444432
Q ss_pred CCc----c---ccCHHHH----HHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC
Q 006746 249 WPR----L---RINSEKL----RKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG 312 (632)
Q Consensus 249 ~~~----~---~i~~~~l----~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~ 312 (632)
... . .-+.+.+ ++.+........++..|++--+....|...| ++ +-++|+++|+++++|-+|.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tG 270 (459)
T PRK06931 191 HEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAG 270 (459)
T ss_pred ccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhc
Confidence 100 0 0112333 2333221011234666667556666788776 34 56789999999999998764
Q ss_pred -CCC--CCCCCCCCCCCcEEEEccccccC-CCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 313 -PKD--MDSFGLSLVRPDFLICSFYQIFG-ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 313 -g~~--m~~ldls~~~~Df~~~S~hK~~G-~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
|.. |-....-...||+++++ |.+| ..| +|++..++.. +.+.+...+
T Consensus 271 fGRtG~~~a~~~~gv~PDivt~g--K~l~gG~P--i~av~~~~~~-~~~~~~~~~------------------------- 320 (459)
T PRK06931 271 FARTGKMFAFEHAGIEPDIIVMS--KAVGGGLP--LAVLGIKKEF-DAWQPGGHT------------------------- 320 (459)
T ss_pred CCcCchHHHhhhcCCCCCEEEec--ccccCCcc--eeeeeeHHHH-hhccCCCCC-------------------------
Confidence 310 11111223479998884 7333 224 6777776553 333221111
Q ss_pred cccchhhhhhhccccCCCc-cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSG-PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMIS 467 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~-~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~ 467 (632)
+| |.+ +++. ..+ .+.|+.+.+. .+.
T Consensus 321 ------------~T--~~gnpla~------------aaa-------------------------la~L~~l~~~---~l~ 346 (459)
T PRK06931 321 ------------GT--FRGNQLAM------------ATG-------------------------LTTLKILKEE---NLA 346 (459)
T ss_pred ------------CC--CCCCHHHH------------HHH-------------------------HHHHHHHHhC---CHH
Confidence 11 000 1110 111 1556666543 467
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC-------ccCH---HHHHHHHHhCCcE
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE-------KIEP---VLVQKLADRENIS 537 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~-------~i~~---~~V~kla~~~gI~ 537 (632)
+|++.+.++|.+.|.++.-.. |.| +. -.-+|.++.+.+.+.... ..+. ..+.+.+-++||.
T Consensus 347 ~~~~~~G~~l~~~L~~l~~~~----~~i---~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl 417 (459)
T PRK06931 347 QNAAERGEWLKAQLAELQKRY----PCI---GN--VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLL 417 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCe---Ee--EecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcE
Confidence 888889999999998873111 322 11 023567777777432110 0011 2333444457777
Q ss_pred EccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 538 LSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 538 lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
++.+ +....++|+.+.+..|.+||+.+++.+.+.|..
T Consensus 418 ~~~~--------------------------------------~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 418 LERG--------------------------------------GRNGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred Eeec--------------------------------------CCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 6521 012358999999999999999999999998865
No 365
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.35 E-value=0.00012 Score=81.94 Aligned_cols=180 Identities=9% Similarity=0.069 Sum_probs=97.2
Q ss_pred HHHHHHHHHHcCCC---CCCccEEEeCCHHHHHHHHHhhCC-C-----CCC-CeEE-EeccccchhhHHHHHH---HHhc
Q 006746 173 SAMKKRIMDFLNIS---ENDYGMVFTANRTSAFKLLAESYP-F-----MSV-KNLL-TVYDYESEAVEAMIRT---SEKR 238 (632)
Q Consensus 173 ~~~R~~ia~~l~a~---~~ey~vvft~naT~al~lv~~sl~-~-----~~g-d~il-t~~d~~s~~v~~~~~~---a~~~ 238 (632)
.+.-+++.+++... ++-..|.|+.++|+|...+.+.-. + +++ .+|+ ....||......|.-. ..+.
T Consensus 110 ~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~ 189 (472)
T PRK08742 110 VQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRR 189 (472)
T ss_pred HHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCccccc
Confidence 35556666666321 011269999999998887655321 1 123 3465 4457776433222110 0000
Q ss_pred C-----CEEEEEeccCCc----c-------ccCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccchH-----HHHH
Q 006746 239 G-----ARVMSAEFSWPR----L-------RINSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYPYL-----WMRI 296 (632)
Q Consensus 239 G-----~~v~~v~~~~~~----~-------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~pl~-----i~~~ 296 (632)
+ ..+..+|..... + ..+.+.+++.|... ...+..|++-- +....|...|-+ +.++
T Consensus 190 ~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~l 266 (472)
T PRK08742 190 VYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQS---PGEICALILEPRLQCAGGMRMHHPAYLRRAREL 266 (472)
T ss_pred ccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEccccccCCCcccCCHHHHHHHHHH
Confidence 0 012333331000 0 01245666667532 23566666765 566778876533 4567
Q ss_pred HhhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 297 AQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 297 a~~~g~~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
|+++|+++++|-+|.+ |.. |-..+.....||+++++ |.+|..-.-+|++++++++++.+
T Consensus 267 c~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~g--Kgl~gG~~Plaav~~~~ei~~~~ 328 (472)
T PRK08742 267 CDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLS--KGLTGGFLPLSAVLATQQLYDAF 328 (472)
T ss_pred HHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEc--ccccCCCCCcceeeccHHHHHHh
Confidence 9999999999998774 321 11122223479999984 85542100179999998876544
No 366
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.33 E-value=0.00012 Score=81.39 Aligned_cols=102 Identities=15% Similarity=0.082 Sum_probs=67.3
Q ss_pred hHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE--EEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHH
Q 006746 453 RGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV--KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKL 530 (632)
Q Consensus 453 ~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v--~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kl 530 (632)
+.|+.+.+ +.+.+|++.+.++|.+.|.++.-.. |.+ .+ ..+|.++.+.+.+.. ....+.+.
T Consensus 337 a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~----~~~~~~v------rg~G~~~~i~~~~~~----~~~~~~~~ 399 (443)
T PRK08297 337 RILEVIEE---DGLVENAARQGEYLLARLEELAAEF----PAVVSNV------RGRGLMCAFDLPTTA----DRDEVIRR 399 (443)
T ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHC----CCcceee------eccceEEEEEecCHH----HHHHHHHH
Confidence 45555544 4567888888888888888763111 212 22 135778888875411 12334444
Q ss_pred HHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 531 ADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 531 a~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+.++||.+..+ +..++|+++.+..|.+||+.+++.|.+.|
T Consensus 400 l~~~Gvl~~~~----------------------------------------~~~~lr~~P~l~~t~~eid~~l~~l~~~l 439 (443)
T PRK08297 400 LWEEGVLVLPC----------------------------------------GERSIRFRPALTVTTEEIDAAIDALRRAL 439 (443)
T ss_pred HHHCCEEEecC----------------------------------------CCCeEEEECCccCCHHHHHHHHHHHHHHH
Confidence 44678877421 22479999999999999999999999887
Q ss_pred h
Q 006746 611 D 611 (632)
Q Consensus 611 ~ 611 (632)
+
T Consensus 440 ~ 440 (443)
T PRK08297 440 P 440 (443)
T ss_pred H
Confidence 5
No 367
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.33 E-value=8.9e-05 Score=78.80 Aligned_cols=168 Identities=15% Similarity=0.299 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHH--HHHHhh---------CCCCCCCe--EEEe---ccccchhhHHHHHHH
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAF--KLLAES---------YPFMSVKN--LLTV---YDYESEAVEAMIRTS 235 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al--~lv~~s---------l~~~~gd~--ilt~---~d~~s~~v~~~~~~a 235 (632)
+-++|+..++++|++++ .||...|.+-.| .++..+ -||...++ +|.+ ||-| -.++
T Consensus 71 ipe~r~l~a~llgv~~~--~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRH-------Fai~ 141 (425)
T PF12897_consen 71 IPEARELFAELLGVPPE--NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRH-------FAIT 141 (425)
T ss_dssp -HHHHHHHHHHHTS-GG--GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHH-------HHHH
T ss_pred hHHHHHHHHHHhCCCHH--HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHH-------HHHH
Confidence 35899999999999987 566666655432 233333 26755554 4432 4432 2356
Q ss_pred HhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHh----hCCcEEEEeccc
Q 006746 236 EKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQ----ENDWHILIDACA 310 (632)
Q Consensus 236 ~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~----~~g~~vlvDaaq 310 (632)
+..|++...||.. ++| .|.+.+++++.++. .-.++.++|--||+||+.|+-+ .-++|. +.+-.++.|-|-
T Consensus 142 E~~Giemi~VpM~-~dG-PDmD~Ve~LV~~D~---svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY 216 (425)
T PF12897_consen 142 EHFGIEMIPVPMT-EDG-PDMDMVEELVAEDP---SVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAY 216 (425)
T ss_dssp HHCT-EEEEEEEE-TTE-E-HHHHHHHTHTST---TEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TT
T ss_pred HhhCcEEEecCCC-CCC-CCHHHHHHHHhcCC---ccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCc
Confidence 8899999999997 454 79999999886432 2358999999999999999988 556653 468889999764
Q ss_pred cCCCCCC--C----CCC-----CCCCCc--EEEEcccc-ccCCCCCceEEEEEeCCCcc
Q 006746 311 LGPKDMD--S----FGL-----SLVRPD--FLICSFYQ-IFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 311 ~~g~~m~--~----ldl-----s~~~~D--f~~~S~hK-~~G~~P~G~G~L~Vr~~~~~ 355 (632)
.+-+-.. + +|+ ..-+|| |+.+|.-| .|- ..|++++-.++.-++
T Consensus 217 ~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~--GaGva~~aaS~~Nl~ 273 (425)
T PF12897_consen 217 AVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFP--GAGVAFFAASEANLA 273 (425)
T ss_dssp TT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-T--TSS-EEEEE-HHHHH
T ss_pred eEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccC--CcceeeeecCHHHHH
Confidence 4422000 1 122 122445 77888899 454 347777776665443
No 368
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=98.22 E-value=1.5e-05 Score=83.94 Aligned_cols=124 Identities=14% Similarity=0.115 Sum_probs=100.0
Q ss_pred HHHHHHHHHcCCCC----CCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 174 AMKKRIMDFLNISE----NDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 174 ~~R~~ia~~l~a~~----~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
.+|++||++++-+. +..+|++|++.++|+++++.++- ++|.+||++. .|+ +.-..|+-.|.+|+...+=
T Consensus 107 ~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA-~p~aNILlPrPGfp-----~Y~~~a~~~~lEVR~ydlL 180 (447)
T KOG0259|consen 107 PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA-NPGANILLPRPGFP-----LYDTRAIYSGLEVRYYDLL 180 (447)
T ss_pred HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-CCCCceecCCCCCc-----hHHHhhhhcCceeEeeccc
Confidence 79999999987543 12379999999999999999994 8999988764 444 3333467789999999773
Q ss_pred -CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecc
Q 006746 249 -WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDAC 309 (632)
Q Consensus 249 -~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaa 309 (632)
..+.++|++.++.+++++| ..+++---+|++|-.+..+ |++.|++.|+.|+-|-.
T Consensus 181 Pe~~weIDL~~veal~DENT------~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEV 240 (447)
T KOG0259|consen 181 PEKDWEIDLDGVEALADENT------VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEV 240 (447)
T ss_pred CcccceechHHHHHhhccCe------eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhh
Confidence 2456899999999999986 6677778899999999755 56778999999999974
No 369
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=98.13 E-value=0.0018 Score=69.70 Aligned_cols=133 Identities=17% Similarity=0.271 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHHHcCCCC-CCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 169 SGLESAMKKRIMDFLNISE-NDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~-~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.+++..+++-....+++++ .+..|+.|++.|.|+..+.+-+ ..+||.|++. +.+.+ ++.. .+..|+++..|+
T Consensus 103 peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~-~N~gd~vlie~~ty~~-AL~s----~~a~gv~~ipv~ 176 (472)
T KOG0634|consen 103 PELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTL-INRGDHVLIEEYTYPS-ALQS----MEALGVKIIPVK 176 (472)
T ss_pred HHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHh-hcCCCceEEecccchH-HHHh----ccccCceEEecc
Confidence 3566666665554566654 4458999999999999999988 7889998765 45554 3433 466787776666
Q ss_pred ccCCccccCHHHHHHHHHhcCcC----CCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecc
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKK----KKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDAC 309 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~----~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaa 309 (632)
.+ ...+++|.|++.+.+.+.. .+..-|.++|--.|+||..++++ |.++||+++.+++.|-.
T Consensus 177 md--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 177 MD--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred cc--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 65 3348999999988764322 23556889999999999999987 67899999999999864
No 370
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.09 E-value=0.00019 Score=78.51 Aligned_cols=204 Identities=14% Similarity=0.105 Sum_probs=125.0
Q ss_pred CCceEeec---CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc
Q 006746 107 SNHTCLDY---FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL 183 (632)
Q Consensus 107 ~~~vyLD~---ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l 183 (632)
++.||.|- ++++.++..|++++.. - |- .||+ ..-+.+..+.++++|
T Consensus 39 s~dV~IDLrSDTgT~apS~~m~aAM~~-G------------DD----------------~Y~g--dpSv~~Lee~vael~ 87 (467)
T TIGR02617 39 SEDVFIDLLTDSGTGAVTQSMQAAMMR-G------------DE----------------AYSG--SRSYYALAESVKNIF 87 (467)
T ss_pred CCCeEEECccCCCCCCCCHHHHHHHHc-C------------Cc----------------cccc--CchHHHHHHHHHHHh
Confidence 45667665 4455689999999764 1 10 0121 122347788999999
Q ss_pred CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEecc-----ccchhhHHHHHHHHhcCCEEEEEecc--------C-
Q 006746 184 NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYD-----YESEAVEAMIRTSEKRGARVMSAEFS--------W- 249 (632)
Q Consensus 184 ~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d-----~~s~~v~~~~~~a~~~G~~v~~v~~~--------~- 249 (632)
|-. .+++|..++.+-+++...+.-.+|+++..... |+. ....-...+.-.|+.++.++.+ .
T Consensus 88 G~E----~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~-~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~ 162 (467)
T TIGR02617 88 GYQ----YTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNY-FFDTTQGHSQINGCTARNVYTKEAFDTGVRYD 162 (467)
T ss_pred CCc----eEEECCCCchHHHHHHHhhcccccccccccccccccceEE-EEecchHHHHHcCceeecccchhhcccccCCC
Confidence 985 47899999999998888774336776552221 111 1111122345578887776321 1
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCC-CccccchH-H---HHHHhhCCcEEEEeccccC-----------C
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRM-TGARYPYL-W---MRIAQENDWHILIDACALG-----------P 313 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~-TG~~~pl~-i---~~~a~~~g~~vlvDaaq~~-----------g 313 (632)
..|.+|+++|+++|.+... .++..+..+..+|. -|...|++ + .++|+++|+.+++|||=.+ +
T Consensus 163 fkG~~dl~~le~~I~~~g~--~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~ 240 (467)
T TIGR02617 163 FKGNFDLEGLERGIEEVGP--NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAE 240 (467)
T ss_pred CCCCcCHHHHHHHHhhcCC--CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchh
Confidence 3578999999999985311 12233333333343 57778887 4 4679999999999995322 1
Q ss_pred CCCCCCCCCC------CCCcEEEEccccccCCCCCceEEEEEeCC
Q 006746 314 KDMDSFGLSL------VRPDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 314 ~~m~~ldls~------~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
. ....+++ -.+|-+.+|+-|-+|. |-| |+|..+++
T Consensus 241 a--~~~si~eI~rE~~~~aDsvt~slsKglgA-pvG-g~Lag~d~ 281 (467)
T TIGR02617 241 Y--KNWSIEQITRETYKYADMLAMSAKKDAMV-PMG-GLLCFKDD 281 (467)
T ss_pred h--cCCCHHHHHHHhhccCCEEEEEcCCCCCC-ccc-ceEEecch
Confidence 1 1122221 3689999999998886 643 45555555
No 371
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.07 E-value=0.0013 Score=72.88 Aligned_cols=207 Identities=13% Similarity=0.093 Sum_probs=107.5
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..+ .|--.+.+++++.+.++.. + .| .++ .....+.-+++.
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~----~-------~~------~~~----------~~~~~~la~~l~ 98 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDG----C-------NF------TRP----------SAIELDAAESFL 98 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhC----c-------CC------CCC----------CHHHHHHHHHHH
Confidence 6788999854 3555667777766543321 0 01 111 122224566677
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCe-EEEe--ccccchhhHHHHHH-HHhcCCE----EEEEeccCCcc
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKN-LLTV--YDYESEAVEAMIRT-SEKRGAR----VMSAEFSWPRL 252 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~-ilt~--~d~~s~~v~~~~~~-a~~~G~~----v~~v~~~~~~~ 252 (632)
+++... ..|.|+.++|+|...+.+.-..-.|+. |+.. ..+|+ ...|.... ....|.. .....+.
T Consensus 99 ~~~p~~---~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~-~~~~~~g~~~~~~~~~~~~~~~~~~~~---- 170 (431)
T PRK06209 99 ELIDGA---DMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFS-TDDWFIGTTPMSAGIPASVSALTVTFR---- 170 (431)
T ss_pred HhCCcc---ceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCcccc-ccccccccCCCCCCCChhHhccccccC----
Confidence 776321 269999999999887665321113444 5543 23332 01111000 0000100 0011111
Q ss_pred ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC---CCCCcE
Q 006746 253 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS---LVRPDF 328 (632)
Q Consensus 253 ~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls---~~~~Df 328 (632)
.-|+++++++|.... ..+..|++..+....+-.-+++ +.++|+++|+++++|-++.+ ......... ...||+
T Consensus 171 ~~d~~~l~~~l~~~~---~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG-~~~~~~g~~~~~gv~PDi 246 (431)
T PRK06209 171 YNDIASLEALFEDHP---GRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITG-FRWHMRGAQKLYGIVPDL 246 (431)
T ss_pred CCCHHHHHHHHHhCC---CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccccc-CCcCcchhhHHhCCCcce
Confidence 126788998886421 2455666644433322233377 88999999999999998743 211111111 236887
Q ss_pred EEEccccccCCCCCceEEEEEeCCCcc
Q 006746 329 LICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 329 ~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
++ +=|.+|. -.-+|++..+++.++
T Consensus 247 ~t--~gK~lgg-G~p~~av~~~~~i~~ 270 (431)
T PRK06209 247 SC--FGKALGN-GFAVSALAGKREYME 270 (431)
T ss_pred ee--ehhhhcC-CcccEEEEEHHHHHh
Confidence 55 4686552 112677777776654
No 372
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.06 E-value=0.00011 Score=79.02 Aligned_cols=183 Identities=10% Similarity=0.119 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC------CCCCC-eEEE-eccccchhhHHHH-----HHHH
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP------FMSVK-NLLT-VYDYESEAVEAMI-----RTSE 236 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~------~~~gd-~ilt-~~d~~s~~v~~~~-----~~a~ 236 (632)
+...+.-+++.+.++- .-..|.|+.++|+|+..+++-.. ..++. +|+. ...||......+. ...+
T Consensus 59 ~~~~~la~~L~~~~p~--~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~ 136 (339)
T PF00202_consen 59 PEAAELAEKLAELFPG--GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRK 136 (339)
T ss_dssp HHHHHHHHHHHHHSST--TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHT
T ss_pred cchhhhhhhhhhcccc--ccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccc
Confidence 4556777888888833 23479999999999998776543 23344 4654 4577753332221 0111
Q ss_pred hcC---CEEEEEeccCCcc----ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEE
Q 006746 237 KRG---ARVMSAEFSWPRL----RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHI 304 (632)
Q Consensus 237 ~~G---~~v~~v~~~~~~~----~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~v 304 (632)
..+ ..+..+|.+.+.. ....+++++.+.+.. .+.+..|++--+....|...| ++ +.++|+++|+++
T Consensus 137 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gill 214 (339)
T PF00202_consen 137 GFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALN--ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILL 214 (339)
T ss_dssp TTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EE
T ss_pred cccccccccccccCCccchhhhHHHHHHHHHHHHHhhc--CCcEEEEEEeccccccCccccccchhhehcccccccccce
Confidence 111 2456677642211 001222333333211 234677777777777788765 33 567899999999
Q ss_pred EEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 305 LIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 305 lvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
++|-+|.+ |.. +-..+.....||+++++ |.+|. -.-+|+++++++..+.+.+
T Consensus 215 I~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~g-G~p~sav~~~~~i~~~~~~ 269 (339)
T PF00202_consen 215 IADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGG-GLPISAVLGSEEIMEAFQP 269 (339)
T ss_dssp EEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGT-TSSEEEEEEEHHHHTTSCT
T ss_pred ecccccccccccCCccceecccccCcccccc--cchhh-hhhcccccccchhhccccc
Confidence 99998775 221 11112233579999998 95443 2458999999988766644
No 373
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.05 E-value=0.00012 Score=77.73 Aligned_cols=203 Identities=13% Similarity=0.102 Sum_probs=124.6
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHH-HcCCC-
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMD-FLNIS- 186 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~-~l~a~- 186 (632)
-+|-|-.|-.+.-++|.++......... +..|- ... |. ...++.+++ +||.+
T Consensus 34 GvY~de~Gk~pvl~aV~~Ae~~l~~~~~---~k~Yl------------~i~-----G~------~~f~~~~~~llFG~d~ 87 (396)
T COG1448 34 GVYKDEDGKTPVLRAVKKAEKRLLEQEK---TKNYL------------PIE-----GL------PEFLEAVQKLLFGADS 87 (396)
T ss_pred eeeeCCCCCcchhHHHHHHHHHhhcccc---ccccC------------CcC-----Cc------HHHHHHHHHHhcCCCc
Confidence 5799999999999999888665443210 11111 010 11 123333333 45643
Q ss_pred ----CCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEe---ccccchhhHHHHHHHHhcCCEEEEEec-cCCccccCHH
Q 006746 187 ----ENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTV---YDYESEAVEAMIRTSEKRGARVMSAEF-SWPRLRINSE 257 (632)
Q Consensus 187 ----~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~---~d~~s~~v~~~~~~a~~~G~~v~~v~~-~~~~~~i~~~ 257 (632)
++-..-+=|.++|.||++.++-+. +.+...|-++ ...|. .+-+..|.+|..-|. +.++..+|.+
T Consensus 88 ~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~-------~If~~aGl~v~~Y~Yyd~~~~~~df~ 160 (396)
T COG1448 88 PALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHK-------AIFEAAGLEVETYPYYDAETKGLDFD 160 (396)
T ss_pred HHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHH-------HHHHhcCCceeeeeccccccccccHH
Confidence 122223457799999999998874 2333344322 23332 123567999987775 4455568988
Q ss_pred HHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHH---HhhCCcEEEEecc-ccCCCCCCCCCC---------CC
Q 006746 258 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRI---AQENDWHILIDAC-ALGPKDMDSFGL---------SL 323 (632)
Q Consensus 258 ~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~---a~~~g~~vlvDaa-q~~g~~m~~ldl---------s~ 323 (632)
.+...|.... .+.-++--.-+.|+||.-...+ |.++ .+++|++.++|-| |..+. -|+- +.
T Consensus 161 ~mla~L~~a~---~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~---GleeDa~~lR~~a~~ 234 (396)
T COG1448 161 GMLADLKTAP---EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD---GLEEDAYALRLFAEV 234 (396)
T ss_pred HHHHHHHhCC---CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc---chHHHHHHHHHHHHh
Confidence 8888887543 1222333344779999999988 8654 5789999999987 65553 1222 12
Q ss_pred CCCcEEEEccccccCCCCCceEEEEEe
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
...=|++.||-|-||.+-.-+|++.+-
T Consensus 235 ~~~~lva~S~SKnfgLYgERVGa~~vv 261 (396)
T COG1448 235 GPELLVASSFSKNFGLYGERVGALSVV 261 (396)
T ss_pred CCcEEEEehhhhhhhhhhhccceeEEE
Confidence 233577778889888766678888775
No 374
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.02 E-value=0.0016 Score=70.75 Aligned_cols=202 Identities=16% Similarity=0.212 Sum_probs=121.8
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
+++-|.||+.. |--++.+.+++.+.+.. + .+||..+ +..-+.-+.|.
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~---G-----------------------~~fg~Pt-e~Ei~~Aell~ 103 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER---G-----------------------LSFGAPT-ELEVELAELLI 103 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHh---c-----------------------CCCCCCC-HHHHHHHHHHH
Confidence 57889999864 33456688887654421 1 1123222 23334557777
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHH---HhhCCCCCCCeEE-EeccccchhhHH-HHHHHHhcCC---------------
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLL---AESYPFMSVKNLL-TVYDYESEAVEA-MIRTSEKRGA--------------- 240 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv---~~sl~~~~gd~il-t~~d~~s~~v~~-~~~~a~~~G~--------------- 240 (632)
+.+..=+ -|=|++|+|+|.-.+ +++| ...++|+ ..-.||. ...+ +... ..|+
T Consensus 104 ~~~p~~e---~vrfvnSGTEAtmsAiRlARa~--TgR~kIikF~G~YHG-~~D~~lv~a--gsg~~t~g~p~s~Gvp~~~ 175 (432)
T COG0001 104 ERVPSIE---KVRFVNSGTEATMSAIRLARAY--TGRDKIIKFEGCYHG-HSDSLLVKA--GSGAATLGSPSSPGVPADV 175 (432)
T ss_pred HhcCccc---EEEEecchhHHHHHHHHHHHHh--hCCCeEEEEcCCCCC-CccHHHhhc--CcCcccCCCCCCCCCChhh
Confidence 7777632 589999999997764 4555 4455665 4445665 3443 3221 1121
Q ss_pred --EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-----HHHHHhhCCcEEEEeccccC-
Q 006746 241 --RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-----WMRIAQENDWHILIDACALG- 312 (632)
Q Consensus 241 --~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-----i~~~a~~~g~~vlvDaaq~~- 312 (632)
.+..+|+ -|++.+++++.+.. ..+.-|.+--+-..-|.+.|-+ +-++|+++|+++|+|-+-.+
T Consensus 176 a~~ti~~~y------ND~~al~~~~~~~g---~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGF 246 (432)
T COG0001 176 AKHTLVLPY------NDLEALEEAFEEYG---DDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGF 246 (432)
T ss_pred hccEEEecC------CCHHHHHHHHHHcC---CcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhc
Confidence 1222333 27889999998642 3466666766666788888854 45789999999999975432
Q ss_pred -----CCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 313 -----PKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 313 -----g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
|.. .-.+ ..||+.++ =|+.|. --=+|++--|++.++.+.|
T Consensus 247 R~~~gGaq-~~~g---i~PDlttl--GKiIGG-GlP~ga~gGr~eiM~~~~p 291 (432)
T COG0001 247 RVALGGAQ-GYYG---VEPDLTTL--GKIIGG-GLPIGAFGGRAEIMEQLAP 291 (432)
T ss_pred ccCCcccc-cccC---cCcchhhh--hhhhcC-CcceeeeccHHHHHhhhCC
Confidence 221 1223 35787654 496553 2236888888888875544
No 375
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.99 E-value=0.001 Score=73.08 Aligned_cols=309 Identities=16% Similarity=0.219 Sum_probs=172.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--C----CCCCe-EEE-eccccchhhHHH-----HHHHHh-c
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--F----MSVKN-LLT-VYDYESEAVEAM-----IRTSEK-R 238 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--~----~~gd~-ilt-~~d~~s~~v~~~-----~~~a~~-~ 238 (632)
.+.-++++++..-. +=..|.||.|+++|++.+++..- | ++.++ +++ ...||.+.+..| ...-+. .
T Consensus 90 ~~LA~~L~~~aP~~-~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~ 168 (449)
T COG0161 90 IELAEKLAELAPEG-GLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFY 168 (449)
T ss_pred HHHHHHHHHhCCCC-CccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhc
Confidence 35666777776622 12379999999999998775421 2 23333 654 457886555443 111101 1
Q ss_pred C---CEEEEEeccC--Cc-----cc----cCHHHHHHHHHhcCcCCCceeEEEE-eccCCCCccccchH-----HHHHHh
Q 006746 239 G---ARVMSAEFSW--PR-----LR----INSEKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARYPYL-----WMRIAQ 298 (632)
Q Consensus 239 G---~~v~~v~~~~--~~-----~~----i~~~~l~~~i~~~~~~~~~~~Lv~~-~~~sn~TG~~~pl~-----i~~~a~ 298 (632)
+ ..+..++... .. .. -..++|+++|.... ..++.-|++ |.+....|++.|-. +-++|+
T Consensus 169 ~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g--~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ 246 (449)
T COG0161 169 DPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHG--PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICD 246 (449)
T ss_pred cccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcC--cccEEEEEecccccccCCcccCChHHHHHHHHHHH
Confidence 1 1222333221 00 11 12456677776532 123444444 44555588887754 346799
Q ss_pred hCCcEEEEeccccC-CCCCC-CCCCC--CCCCcEEEEcccc-ccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccc
Q 006746 299 ENDWHILIDACALG-PKDMD-SFGLS--LVRPDFLICSFYQ-IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKK 373 (632)
Q Consensus 299 ~~g~~vlvDaaq~~-g~~m~-~ldls--~~~~Df~~~S~hK-~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~ 373 (632)
++|+++|+|-+..+ |.. . -+-++ ...||+++++ | +-|. --=+|++++++++.+.+.... +|.
T Consensus 247 ky~ILlI~DEV~tGFGRT-G~~FA~e~~gi~PDi~~~a--KGLT~G-Y~Pl~a~l~~~~I~~~~~~~~-~~~-------- 313 (449)
T COG0161 247 KYGILLIADEVATGFGRT-GKMFACEHAGIVPDILCLA--KGLTGG-YLPLSAVLTSDRIYEAFSDGD-AGA-------- 313 (449)
T ss_pred HcCcEEEeecceeCCCcC-chhhhhhhcCCCCCeeeec--cccccc-chhhHhHhhhHHHHHHHhccc-CCe--------
Confidence 99999999975333 210 1 12222 2478999876 7 3222 223777888887765443321 111
Q ss_pred ccccccccCCCCCCccccchhhhhhhccccCCCc-cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhh
Q 006746 374 QLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG-PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIEC 452 (632)
Q Consensus 374 ~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~-~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (632)
| ..| ..|++ +++- -.+|
T Consensus 314 ---------------------f---~HG-~TYsghPlac------------AaAl------------------------- 331 (449)
T COG0161 314 ---------------------F---MHG-HTYSGNPLAC------------AAAL------------------------- 331 (449)
T ss_pred ---------------------e---ccC-CccccCHHHH------------HHHH-------------------------
Confidence 0 011 12221 1110 1112
Q ss_pred hHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-cCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCcc-----CHHH
Q 006746 453 RGLDQVDSLGLTMISRRGRCLINWLVNALMK-LQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKI-----EPVL 526 (632)
Q Consensus 453 ~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~-l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i-----~~~~ 526 (632)
+.|+.+.+ +.+.+|++.+..+|.++|.+ +. +.|.| |.- ...|-+.++-+...++.+. -...
T Consensus 332 a~L~i~e~---e~l~~~~~~~~~~l~~~L~~~l~-----~~p~V---gdV--R~~Gli~~iElv~d~~t~~~f~~~~~~~ 398 (449)
T COG0161 332 ANLDILEE---EDLLERVAEIGAYLQAGLQAALA-----DHPLV---GDV--RGLGLIGAIELVADKATKTPFEARVGAR 398 (449)
T ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHHhcc-----cCCcE---EEe--eccceEEEEEEecccccccchhhhHHHH
Confidence 45666665 45678888999999999987 32 11333 221 2346666776654433221 1335
Q ss_pred HHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHH
Q 006746 527 VQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 606 (632)
Q Consensus 527 V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l 606 (632)
+.+.+-++|+.+|.. + .+|=+++-+..|.|||+++++.+
T Consensus 399 ~~~~~~e~Gl~iRp~----------------------------------------g-~~i~~~PPliit~~eid~l~~~l 437 (449)
T COG0161 399 VRAAALERGLLIRPL----------------------------------------G-DVIYLMPPLIITREEIDELVDAL 437 (449)
T ss_pred HHHHHHHCCeEEeec----------------------------------------C-CEEEEcCCccCCHHHHHHHHHHH
Confidence 556666788888732 1 27889999999999999999999
Q ss_pred HHhhhhc
Q 006746 607 AQFLDAD 613 (632)
Q Consensus 607 ~~~l~~~ 613 (632)
++-|+..
T Consensus 438 ~~al~~~ 444 (449)
T COG0161 438 REALDET 444 (449)
T ss_pred HHHHHHH
Confidence 9988753
No 376
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.98 E-value=3.3e-05 Score=82.73 Aligned_cols=200 Identities=14% Similarity=0.102 Sum_probs=115.4
Q ss_pred EeecCCCC-----CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccc--cccc-hhHHHHHHHHHHHHH
Q 006746 111 CLDYFGIG-----LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLL--HGGQ-ESGLESAMKKRIMDF 182 (632)
Q Consensus 111 yLD~ag~g-----l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~--~g~~-~~~~~~~~R~~ia~~ 182 (632)
++|++|.| .++.-|.+.+..+..-.- .++|+...-+ -|.. ...+-...-..+.+.
T Consensus 6 ~~~~~g~gere~rv~s~lv~~r~~~~~Hgig-----------------rsg~~~~~qPKa~Gss~~~~ltn~l~~d~~~~ 68 (389)
T PF05889_consen 6 FPDNVGVGEREGRVASSLVARRHYGFAHGIG-----------------RSGDLAAAQPKAAGSSLLAKLTNSLVLDALRL 68 (389)
T ss_dssp -TT-EE-SS-S---SSHHHHHHTTTHCSTBS-----------------BTTBTTS-BTTBCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhHHHhhccccccccCcC-----------------CCCCccccCCCccCcHHHHHHHHHHHHHHHHH
Confidence 67788887 788877777655432110 1233322111 0111 123333444455667
Q ss_pred cCCCCCCccEEEeCCHHH-HHHHHHhhCCCCC-CCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec--cCCccccCHH
Q 006746 183 LNISENDYGMVFTANRTS-AFKLLAESYPFMS-VKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF--SWPRLRINSE 257 (632)
Q Consensus 183 l~a~~~ey~vvft~naT~-al~lv~~sl~~~~-gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~--~~~~~~i~~~ 257 (632)
+|+..-. ..+.++-+|. ++-+...++.-++ ++.|+. ..||-| .+-. +...|.+++.|+. ..+....+.+
T Consensus 69 ~G~~~~~-~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkS-c~ka----i~~AGl~~~vV~~~~~~d~l~td~~ 142 (389)
T PF05889_consen 69 AGLRSVK-SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKS-CFKA----IERAGLEPVVVENVLEGDELITDLE 142 (389)
T ss_dssp TTHTTHC-EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHH-HHHH----HHHTT-EEEEE-EEEETTEEEEHHH
T ss_pred cCCcccc-ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccc-hHHH----HHhcCCeEEEeeccCCCCeeeccHH
Confidence 7887432 4556665554 3444444443223 344554 468876 3433 3556999999974 2344455788
Q ss_pred HHHHHHHhcCcCCCceeEEEEeccCCCCccccc-hH-HHHHHhhCCcEEEEeccccC---------------CCCCCCCC
Q 006746 258 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP-YL-WMRIAQENDWHILIDACALG---------------PKDMDSFG 320 (632)
Q Consensus 258 ~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p-l~-i~~~a~~~g~~vlvDaaq~~---------------g~~m~~ld 320 (632)
.+++.+++.. ....|.++++.|-+.|...| ++ |+++|+++|+..+|-.|-.+ |. .+.+
T Consensus 143 ~ie~~i~~~G---~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GR--vda~ 217 (389)
T PF05889_consen 143 AIEAKIEELG---ADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGR--VDAF 217 (389)
T ss_dssp HHHHHHHHHC---GGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHST--CSEE
T ss_pred HHHHHHHHhC---CCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCC--ccee
Confidence 8888886532 34589999999999999999 99 99999999999999999888 76 4566
Q ss_pred CCCCCCcEEEEcccc-ccC
Q 006746 321 LSLVRPDFLICSFYQ-IFG 338 (632)
Q Consensus 321 ls~~~~Df~~~S~hK-~~G 338 (632)
++..+.||++-++|| +.+
T Consensus 218 vqS~dkNF~VPvGgai~As 236 (389)
T PF05889_consen 218 VQSTDKNFMVPVGGAIMAS 236 (389)
T ss_dssp EEEHHHHHCEESSHEEEEE
T ss_pred eeecCCCEEecCCCcEEEe
Confidence 666666777777777 444
No 377
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.87 E-value=0.0011 Score=69.07 Aligned_cols=173 Identities=12% Similarity=0.158 Sum_probs=103.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHH-----hhCCCC--CCCe--EEEe-ccccchhhHHHH-----H
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLA-----ESYPFM--SVKN--LLTV-YDYESEAVEAMI-----R 233 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~-----~sl~~~--~gd~--ilt~-~d~~s~~v~~~~-----~ 233 (632)
.+...+.-+.+.++|+-+ .|.=++.+.+|.+.+. .++..+ |.++ |+.. ..+|.-....+- .
T Consensus 100 nd~~~~f~~~vt~lf~~~----kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~d 175 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYD----KVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPD 175 (427)
T ss_pred hhhHHHHHHHHHHhcCcc----eeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcc
Confidence 355567778888888875 3444555556555443 233322 3333 4543 344431111000 0
Q ss_pred HHHhcCC----EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-----HHHHHhhCCcEE
Q 006746 234 TSEKRGA----RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-----WMRIAQENDWHI 304 (632)
Q Consensus 234 ~a~~~G~----~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-----i~~~a~~~g~~v 304 (632)
.-+..|- .+..+|. -+.++|+.+|.+. ++.-|.+--.+-..|++.|-. .-++|.++++++
T Consensus 176 s~~~fgp~~P~~~~~v~Y------~d~eale~~l~~~-----~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~ 244 (427)
T KOG1402|consen 176 SWDGFGPFLPGVVDKVPY------GDAEALEVALKSP-----NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLL 244 (427)
T ss_pred hhhccCCCCCCcceeecc------CCHHHHHHHhcCC-----CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEE
Confidence 0011110 1222322 1678999998863 578889999999999999854 456788999999
Q ss_pred EEeccccC----CCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 305 LIDACALG----PKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 305 lvDaaq~~----g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
++|-.|.+ |+ |...|-+...||.+++. |.++..-.-+.+.+..++++-.++|
T Consensus 245 I~DEvQTGl~RTGk-~la~d~env~PDivilg--KalSGG~~Pvsavl~~~~im~~~~p 300 (427)
T KOG1402|consen 245 IADEVQTGLARTGK-LLACDYENVRPDIVILG--KALSGGVYPVSAVLADDDIMLNIKP 300 (427)
T ss_pred EehhhhhcccccCc-EEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecHHHHhccCC
Confidence 99999887 33 45667788899999875 7443112225666667776655554
No 378
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=97.87 E-value=0.00078 Score=71.52 Aligned_cols=302 Identities=13% Similarity=0.130 Sum_probs=166.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-eEE-EeccccchhhHHHHH--HHHhcC----C--EE
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK-NLL-TVYDYESEAVEAMIR--TSEKRG----A--RV 242 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-~il-t~~d~~s~~v~~~~~--~a~~~G----~--~v 242 (632)
.+.-+++++.|-.+-. .+.|++++++|..+.......-.|. +|+ ....||.++...|-- ..-++. . -+
T Consensus 95 ~~~Ae~L~s~~P~~l~--~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~ 172 (442)
T KOG1404|consen 95 HDLAEALVSKLPGDLK--VVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGV 172 (442)
T ss_pred HHHHHHHHHhCCCCce--EEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcc
Confidence 3555666666655544 6899999999999876543222222 344 566777654433210 000110 0 01
Q ss_pred EE-Eecc-----CCccc--cCH----HHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-----HHHHHhhCCcEEE
Q 006746 243 MS-AEFS-----WPRLR--INS----EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-----WMRIAQENDWHIL 305 (632)
Q Consensus 243 ~~-v~~~-----~~~~~--i~~----~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-----i~~~a~~~g~~vl 305 (632)
.. ...+ |++.. --. +++++.|...+ ...+.-|+.-.++-+-|+..+.. .-+.|+++|.+++
T Consensus 173 ~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~--~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~I 250 (442)
T KOG1404|consen 173 HHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDG--PETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFI 250 (442)
T ss_pred cccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcC--CCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEE
Confidence 11 1111 11110 012 33444444332 23466666677778889887644 4467889999999
Q ss_pred EeccccC----CCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccccccccccc
Q 006746 306 IDACALG----PKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEF 381 (632)
Q Consensus 306 vDaaq~~----g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~ 381 (632)
.|-+|.+ |+ |-.++-...-||.+. .-|.+|. -.-+|+.+..++..+.+...... +.
T Consensus 251 aDEVqtGfGRtG~-~wgfe~h~v~PDIvT--mAKgiGn-G~Pl~AVvtt~EIa~v~~~~~~~-----------fn----- 310 (442)
T KOG1404|consen 251 ADEVQTGFGRTGH-MWGFESHGVVPDIVT--MAKGIGN-GFPLGAVVTTPEIADVLNQKSSH-----------FN----- 310 (442)
T ss_pred ehhhhhccccccc-cccccccCCCccHHH--HHhhccC-CCcceeeecCHHHHHHHHhcccc-----------cc-----
Confidence 9999876 32 333444444567664 4486653 34578888888877666443210 00
Q ss_pred CCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh
Q 006746 382 SSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL 461 (632)
Q Consensus 382 ~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~ 461 (632)
.+ .| .|.... .++ +.|+.++
T Consensus 311 ------------Ty----gg-nP~a~a----------------vg~-------------------------aVL~Vik-- 330 (442)
T KOG1404|consen 311 ------------TY----GG-NPVACA----------------VGL-------------------------AVLKVIK-- 330 (442)
T ss_pred ------------cc----CC-CchhHH----------------HHH-------------------------HHHHHHH--
Confidence 00 00 111100 111 4455554
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHH--HH---HHHHHhCCc
Q 006746 462 GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPV--LV---QKLADRENI 536 (632)
Q Consensus 462 Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~--~V---~kla~~~gI 536 (632)
-++++++......||.+.|.+++..+ | |.|+- .-||=++-..+-+.+-+.-+|+ .. -+-..+.|+
T Consensus 331 -ee~LqE~aa~vG~yl~~~l~~l~d~h----~---iIGdV--RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gv 400 (442)
T KOG1404|consen 331 -EENLQENAAEVGSYLLEKLAALKDKH----P---IIGDV--RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGV 400 (442)
T ss_pred -HHhHHHHHHHHHHHHHHHHHHHhhcC----C---ceeec--ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCe
Confidence 48999999999999999999996433 3 33542 2345555555544331222222 11 122233455
Q ss_pred EEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHH
Q 006746 537 SLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 606 (632)
Q Consensus 537 ~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l 606 (632)
-++-| .....++|+++.+.-|.|||+.+++..
T Consensus 401 lvg~g--------------------------------------~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 401 LVGKG--------------------------------------GIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eeecc--------------------------------------cccceEEEecCCeeccHHHHHHHHHHH
Confidence 55322 122239999999999999997777654
No 379
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.74 E-value=0.00022 Score=76.18 Aligned_cols=174 Identities=12% Similarity=0.134 Sum_probs=116.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHH-HHH---Hhh-CCC--CCCC-----eEE-EeccccchhhHHHHHHHHhcC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAF-KLL---AES-YPF--MSVK-----NLL-TVYDYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al-~lv---~~s-l~~--~~gd-----~il-t~~d~~s~~v~~~~~~a~~~G 239 (632)
.++-.++.++.|-+++- +=||+++++-+. ..+ -.. +|- ..|- -|+ |+.+.|- .+...|.-.|
T Consensus 144 ~~vl~km~~ivGw~~~~-DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHY----Si~kaAa~lg 218 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGG-DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHY----SIKKAAAFLG 218 (510)
T ss_pred HHHHHHHHHHhCCCCCC-CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchh----hHHHHHHHhc
Confidence 35555666677777642 346787665442 222 211 231 1222 244 4444332 2233344455
Q ss_pred ---CEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC
Q 006746 240 ---ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD 315 (632)
Q Consensus 240 ---~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~ 315 (632)
-.++.|+.+ ..|.+.+++|++.|-..+.+.-.+-+|..++-+++-|+.=|++ |+++|++++.++.||||=.+|.-
T Consensus 219 ~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglL 297 (510)
T KOG0629|consen 219 LGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLL 297 (510)
T ss_pred cCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccc
Confidence 467778877 7899999999999987543223468899999999999999999 99999999999999998655542
Q ss_pred CCCC---CCC-CCCCcEEEEccccccCCCCCceEEEEEeCCC
Q 006746 316 MDSF---GLS-LVRPDFLICSFYQIFGENPSGFGCLFVKKST 353 (632)
Q Consensus 316 m~~l---dls-~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~ 353 (632)
|..- -|+ --++|-+..+.||+.|. |.-.+++..|.+-
T Consensus 298 mS~k~R~kl~Giera~SvtwnpHK~~ga-plqCsa~l~r~~g 338 (510)
T KOG0629|consen 298 MSRKHRHKLTGIERANSVTWNPHKLMGA-PLQCSAFLTREEG 338 (510)
T ss_pred cChhhHhhccCccccCceeecHHHhhcC-cchhhHHHHHHHH
Confidence 2211 111 12679999999999998 8888888888765
No 380
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00032 Score=78.14 Aligned_cols=361 Identities=15% Similarity=0.145 Sum_probs=189.0
Q ss_pred CCCchhHHHHHHhhccCcCCCCceEeecCCCCCC----CHHHHHHHhcCCCCCCCCCCCCCCCC-ccccccccccccccc
Q 006746 87 YFDTYQIDQIRAKEYYQLSLSNHTCLDYFGIGLF----SYNQLHKQESSPSHLRPSLPSQNLDI-PFFSVSYKTGNLKTQ 161 (632)
Q Consensus 87 y~~~~~~d~iR~~ef~~L~~~~~vyLD~ag~gl~----~~~~~~a~~~~~~~~~~~~P~~~~~~-p~f~~~~~~~n~~s~ 161 (632)
|.+.+.+.++++ +..++++|=.|.|.|.+ |...++.+.. +|.+|.+. | | ...
T Consensus 100 ~~E~eml~~l~~-----ia~kNk~~ksfIGmGYyn~~vP~~I~RNile--------np~W~TqYTP-----Y-----Q~E 156 (1001)
T KOG2040|consen 100 LCESEMLQHLED-----IASKNKIWKSFIGMGYYNTHVPAVILRNILE--------NPGWYTQYTP-----Y-----QAE 156 (1001)
T ss_pred cCHHHHHHHHHH-----HHhhhhHHHHhhccccccccCcHHHHHHhhh--------CCcceeccCC-----C-----chh
Confidence 334444555543 22378899999998865 3333333322 24333221 1 0 111
Q ss_pred cccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCE
Q 006746 162 LLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 162 ~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~ 241 (632)
...|+-+ -+-.-...|+++-|.+-.+ --+---+|.|-+.++-++...+++++++....|.+...-++.-++-.|++
T Consensus 157 IsQGRLE--sllNyQTmi~dlTGL~~aN--ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~ 232 (1001)
T KOG2040|consen 157 ISQGRLE--SLLNYQTMITDLTGLPMAN--ASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIK 232 (1001)
T ss_pred hhhhhHH--HHhhhHHhhhhccCCcccc--hhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhcccccccee
Confidence 2223332 2225677888988887542 22334566666666666656677777766544444555555444555555
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG 320 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld 320 (632)
+...++. +. -...+ +-.--||-+| ..-|.++|.. +++.++++|.++++ |+-++...+.. .
T Consensus 233 v~~~~~~---------~~---~~s~~--~v~gvlvQYP---~t~G~i~d~~el~~~a~~~~s~vv~-atDLLaLtiLr-p 293 (1001)
T KOG2040|consen 233 VVVSDIK---------EA---DYSSK--DVSGVLVQYP---DTEGSVLDFDELVELAHANGSLVVM-ATDLLALTILR-P 293 (1001)
T ss_pred EEecCHH---------Hh---hcccc--ceeEEEEEcC---CCCCcccCHHHHHHHhhccCceEEE-eehhhHHHccC-C
Confidence 4433221 11 11111 0011222232 4579999999 99999999988765 22222111000 0
Q ss_pred CCCCCCcEEEEccccccCCCCC-----ceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhh
Q 006746 321 LSLVRPDFLICSFYQIFGENPS-----GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~-----G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
--++++|+++.|.+. ||. |- ..|++.|+++....+.-...| ... .. .. ..+.++
T Consensus 294 PgefGaDIavGSsQR-FGV-PlGYGGPHAaFfAv~~~l~R~mPGRiiG-vtk---D~-------------~g--k~a~RL 352 (1001)
T KOG2040|consen 294 PGEFGADIAVGSSQR-FGV-PLGYGGPHAAFFAVSESLVRMMPGRIIG-VTK---DA-------------LG--KEAYRL 352 (1001)
T ss_pred hhhcCceeeeccccc-cCc-cccCCCchHHHHHHHHHHHhhCCCceEe-eee---cc-------------cc--cHHHHH
Confidence 135789999999998 333 43 456677776544333322222 111 00 00 000000
Q ss_pred hhhhccccCCCccchhhhh-----h-cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH-HHHhhCHHHHHH
Q 006746 396 QEKVAATNTFSGPMSIEMR-----Q-SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD-QVDSLGLTMISR 468 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~-----~-~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd-~~~~~Gl~~I~~ 468 (632)
++.+| | -.|.|+--.++|- +-+.+-.. +.-..|++.|.+
T Consensus 353 --------------ALQTREQHIrRDKATSNICTAQALL--------------------ANmaAmyaiYHGp~gL~~IAr 398 (1001)
T KOG2040|consen 353 --------------ALQTREQHIRRDKATSNICTAQALL--------------------ANMAAMYAIYHGPHGLKEIAR 398 (1001)
T ss_pred --------------HHHHHHHHhhhhccchhhhHHHHHH--------------------HHHHHHHhhhcCcHHHHHHHH
Confidence 01111 1 1244444444442 00000000 111247999999
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
|+..++..|..+|+...| .++ -. .---++.+.+.+ +.+.|...|.+..|-+|.
T Consensus 399 rvh~~T~~l~~~l~~agh------el~---~k----~fFDTLkI~~~~------s~~~~l~rA~~~~iNlr~-------- 451 (1001)
T KOG2040|consen 399 RVHNLTLILAEGLKNAGH------ELQ---HK----PFFDTLKIRCGC------SAEEVLDRAAKRQINLRL-------- 451 (1001)
T ss_pred HHHHHHHHHHHHHhhcch------hhc---cc----cccceEEEEecC------cHHHHHHHHHhhcCceEE--------
Confidence 999999999999998743 222 11 111233343333 456666666666677762
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
...+.|-+||---.+.+||+.|+..+.
T Consensus 452 --------------------------------~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 452 --------------------------------VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred --------------------------------eecCceEEeecccccHHHHHHHHHHHc
Confidence 134688999999999999999987654
No 381
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=97.63 E-value=0.004 Score=62.92 Aligned_cols=138 Identities=12% Similarity=0.157 Sum_probs=94.2
Q ss_pred cEEEeCCHHHHHHHHHhhCCCCCCC-eEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcC
Q 006746 191 GMVFTANRTSAFKLLAESYPFMSVK-NLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 269 (632)
Q Consensus 191 ~vvft~naT~al~lv~~sl~~~~gd-~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~ 269 (632)
.|...-++-+.+.++++.. ..||+ +|+.+--..|-.+ -.|.-.+++|+.+|.+ |+..++.+.+.+.+....
T Consensus 88 nic~GvGsDE~ID~iiR~~-c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~-pdF~lnvdai~evl~~ds-- 159 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCV-CDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLN-PDFSLNVDAIAEVLELDS-- 159 (375)
T ss_pred ceEEecCcHHHHHHHHhhe-ecCCccceeecCCcceeEE----EEeecCCceEEEecCC-CCccccHHHHHHHHhccc--
Confidence 5777889999999999987 56784 4764321111111 1235579999999998 788899999999887642
Q ss_pred CCceeEEEEeccCCCCccccchH-HHHHHhh-CCcEEEEeccc--cCCCCCCCCCCCCCCCcE-EEEccccccCC
Q 006746 270 KKQRGLFVFPLHSRMTGARYPYL-WMRIAQE-NDWHILIDACA--LGPKDMDSFGLSLVRPDF-LICSFYQIFGE 339 (632)
Q Consensus 270 ~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~-~g~~vlvDaaq--~~g~~m~~ldls~~~~Df-~~~S~hK~~G~ 339 (632)
..+++.++...|+||.++..+ |-++.+- -+.+|+||-|- +-| ++..+.+=.--+.. +.-.+-|-||.
T Consensus 160 --~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg-~~S~~~lV~kYpNLivlqTlSKsfGL 231 (375)
T KOG0633|consen 160 --KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSG-VESRMKLVKKYPNLIVLQTLSKSFGL 231 (375)
T ss_pred --cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeecc-ccccchHhHhCCceeehhhhhhhcCc
Confidence 579999999999999999999 7777654 26789999762 223 12333332223333 33355677774
No 382
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=97.60 E-value=0.013 Score=60.57 Aligned_cols=186 Identities=16% Similarity=0.138 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--CCCCCe--EEEec--cccchhhHHHHH-HHHhcCCEE
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--FMSVKN--LLTVY--DYESEAVEAMIR-TSEKRGARV 242 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--~~~gd~--ilt~~--d~~s~~v~~~~~-~a~~~G~~v 242 (632)
.+++..-+.+.+-+|-.-++..|.+|++...++--++.-|- ...|++ ||++. ||-.=+-..+.+ .--...-++
T Consensus 78 ~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~i 157 (417)
T COG3977 78 VLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNI 157 (417)
T ss_pred HHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCc
Confidence 45556666666666655555689999999998877776653 334554 66543 332100000000 000000011
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKDMDS 318 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~m~~ 318 (632)
..++-..=...+|.+++. +.+ .++.++++-..|+||-.+-=+ +-++|+++|+.+++|-|-.+|. -.
T Consensus 158 el~~~g~FKY~vDF~~l~--i~e------~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PF--P~ 227 (417)
T COG3977 158 ELLPAGQFKYHVDFEHLH--IGE------STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPF--PG 227 (417)
T ss_pred ccccccceeeccCHHHcc--ccc------ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCC--Cc
Confidence 111100011234555543 223 469999999999999987543 4567899999999999988775 23
Q ss_pred CCCCC----CCCc-EEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceee
Q 006746 319 FGLSL----VRPD-FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSL 368 (632)
Q Consensus 319 ldls~----~~~D-f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~ 368 (632)
+-+++ |+.. .+++|.-| .|.|..-+|+++.+++++..+.... |.+++
T Consensus 228 iifsd~~~~w~~NiilC~SLSK-~GLPG~R~GIiIane~viqaitnmn--~iisL 279 (417)
T COG3977 228 IIFSDATPLWNENIILCMSLSK-LGLPGSRCGIIIANEKVIQAITNMN--GIISL 279 (417)
T ss_pred eecccccccCCCCEEEEeehhh-cCCCCcceeEEEccHHHHHHHHhcc--ceeee
Confidence 33332 5555 45667777 5553346799888888876664422 45544
No 383
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.58 E-value=0.0015 Score=69.31 Aligned_cols=166 Identities=16% Similarity=0.191 Sum_probs=96.1
Q ss_pred HHHHHHHHHcCCCCCCccEEEe--CCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHH-------HHHhcCCEEEE
Q 006746 174 AMKKRIMDFLNISENDYGMVFT--ANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIR-------TSEKRGARVMS 244 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft--~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~-------~a~~~G~~v~~ 244 (632)
...+..|+.||+.. .+|=. -|+|.|+.+.+.++ ++|||+++....-|-..+..++. ..+..|++...
T Consensus 58 ~le~iyA~vfgaE~---ALVRpq~vSGTHAi~~~Lfg~-LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~ 133 (403)
T PF06838_consen 58 KLERIYADVFGAED---ALVRPQFVSGTHAIALALFGV-LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYRE 133 (403)
T ss_dssp HHHHHHHHHCT-SE---EEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE
T ss_pred HHHHHHHHHhCchh---hhhcccccchHHHHHHHHHhc-CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEE
Confidence 34455688999852 34432 28999999999998 89999987543333222222221 23678999999
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccc----cc---hH-HHHHHhh--CCcEEEEeccccCCC
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR----YP---YL-WMRIAQE--NDWHILIDACALGPK 314 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~----~p---l~-i~~~a~~--~g~~vlvDaaq~~g~ 314 (632)
+++. +++.+|.+.++++|++++ +++.+.- ..|.- +. ++ +++.+|+ -++.++||-|-.-=.
T Consensus 134 v~L~-~dg~~D~~~i~~~~~~~t------k~v~IQR---SrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFv 203 (403)
T PF06838_consen 134 VPLT-EDGTIDWEAIKKALKPNT------KMVLIQR---SRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFV 203 (403)
T ss_dssp --B--TTSSB-HHHHHHHHHTTE------EEEEEE----S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTT
T ss_pred Eeec-CCCCcCHHHHHHhhccCc------eEEEEec---CCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceec
Confidence 9998 788999999999999754 8877653 33432 23 34 4555555 489999999832211
Q ss_pred CCCCCCCCCCCCcEEEEccccccC--CCCCceEEEEEeCCCccc
Q 006746 315 DMDSFGLSLVRPDFLICSFYQIFG--ENPSGFGCLFVKKSTVPI 356 (632)
Q Consensus 315 ~m~~ldls~~~~Df~~~S~hK~~G--~~P~G~G~L~Vr~~~~~~ 356 (632)
....-...++|.++.|.-|-.| ..| .=|.+.-|+++++.
T Consensus 204 --E~~EP~~vGADl~aGSLIKNpGGgiAp-tGGYIaGr~~lVe~ 244 (403)
T PF06838_consen 204 --ETQEPTEVGADLMAGSLIKNPGGGIAP-TGGYIAGRKDLVER 244 (403)
T ss_dssp --SSS-GGGGT-SEEEEETTSGGGTTT-S-S-EEEEESHHHHHH
T ss_pred --cccCccccchhheeccceeCCCCCccC-cCCEEechHHHHHH
Confidence 1222234588999999999433 323 33677777777654
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.45 E-value=0.03 Score=63.00 Aligned_cols=171 Identities=15% Similarity=0.144 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHH----HHHHHhhCCCCCCCe---E-EEec-cccchhhHHHHHHHHhcC
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSA----FKLLAESYPFMSVKN---L-LTVY-DYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~a----l~lv~~sl~~~~gd~---i-lt~~-d~~s~~v~~~~~~a~~~G 239 (632)
.++..+..+.+.++-|-+ .+.|-+|...+ =-.++++|.-.+|+. | |++. -|-.| +. .|...|
T Consensus 581 ~~lf~~Le~~Lc~iTG~D----~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN--PA---SA~Mag 651 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITGFD----SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN--PA---SAAMAG 651 (1001)
T ss_pred HHHHHHHHHHhheeeccc----ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC--hh---hHHhcC
Confidence 467777777778777775 57788775433 224566665455542 4 3443 34332 22 345569
Q ss_pred CEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccc-cchH-HHHHHhhCCcEEEEecccc---CCC
Q 006746 240 ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYL-WMRIAQENDWHILIDACAL---GPK 314 (632)
Q Consensus 240 ~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~-~pl~-i~~~a~~~g~~vlvDaaq~---~g~ 314 (632)
.+|+.|..+ ..|.+|..+|+.+.++.. .+...+.++..|+ .|+- -.++ ++.+.|++|-.|.+|+|-. +|.
T Consensus 652 mkvvpV~~~-~~G~id~~dLk~kaekh~---~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGl 726 (1001)
T KOG2040|consen 652 MKVVPVGCD-ANGNIDMVDLKAKAEKHK---DNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGL 726 (1001)
T ss_pred CEEEEeecc-CCCCccHHHHHHHHHHhh---hhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecc
Confidence 999999888 788999999999887653 3455666677665 4554 4688 9999999999999999632 232
Q ss_pred CCCCCCCCCCCCcEEEEcccccc----CCCCCceEEEEEeCCCcccc
Q 006746 315 DMDSFGLSLVRPDFLICSFYQIF----GENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 315 ~m~~ldls~~~~Df~~~S~hK~~----G~~P~G~G~L~Vr~~~~~~L 357 (632)
- .|= +++.|+.-...||.| |...+|.|-+-||+-+..-|
T Consensus 727 c-~pG---d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfL 769 (1001)
T KOG2040|consen 727 C-RPG---DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 769 (1001)
T ss_pred c-CCc---cccccceeecccceeeecCCCCCCCCCccchhhhccccC
Confidence 1 222 357899999999944 21134889999998776554
No 385
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.35 E-value=0.0081 Score=71.44 Aligned_cols=230 Identities=13% Similarity=0.093 Sum_probs=131.4
Q ss_pred HHHHHHHHhcC--cCCCceeEEEEec-cCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CC--CCCCCCCCCCC
Q 006746 257 EKLRKMVVSKG--KKKKQRGLFVFPL-HSRMTGARYP----YL-WMRIAQENDWHILIDACALG-PK--DMDSFGLSLVR 325 (632)
Q Consensus 257 ~~l~~~i~~~~--~~~~~~~Lv~~~~-~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~--~m~~ldls~~~ 325 (632)
+.+++.|.... ....++..|++-- +....|...| ++ +.++|+++|+++|+|-++.+ |. .|-..+.-...
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~ 646 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCK 646 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCC
Confidence 45666665310 0123455555555 4566788875 33 56789999999999998765 21 01222222346
Q ss_pred CcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCC
Q 006746 326 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 405 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f 405 (632)
||+++++ |.+|..--=+|++++++++.+.+......+ .+. ..+ .|
T Consensus 647 PDIi~~g--KgLtgG~~Plaa~l~~~~I~~~f~~~~~~~---------~~~----------------------hg~--Ty 691 (817)
T PLN02974 647 PDIACYA--KLLTGGLVPLAATLATEEVFEAFRGPSKLD---------ALL----------------------HGH--SY 691 (817)
T ss_pred CCEEeec--ccccCCCCccEEEEEcHHHHHhhccccccC---------Ccc----------------------cCC--CC
Confidence 9999876 855421012799999988766543110000 000 011 11
Q ss_pred Cc-cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC-HHHHHHHHHHHHHHHHHHH-H
Q 006746 406 SG-PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG-LTMISRRGRCLINWLVNAL-M 482 (632)
Q Consensus 406 ~~-~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G-l~~I~~r~~~L~~~L~~~L-~ 482 (632)
++ +++. ..+ .+.|+.+++.+ ++++.++.+.|..+|.+.| .
T Consensus 692 ~gnpl~c------------Aaa-------------------------la~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~ 734 (817)
T PLN02974 692 TAHPMGC------------AAA-------------------------AKALQWYKDPSTNPNLIPPGSRLRELWDEELVR 734 (817)
T ss_pred CcCHHHH------------HHH-------------------------HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111 111 26777777654 3577777888888777777 3
Q ss_pred ccC-CCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC-ccC---HHHHHHHHH-hCCcEEccCccCChHHHhHHHHhh
Q 006746 483 KLQ-HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE-KIE---PVLVQKLAD-RENISLSYGSLHHIWFSDKYQKEK 556 (632)
Q Consensus 483 ~l~-h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~-~i~---~~~V~kla~-~~gI~lr~G~~c~~~~~~~~~~~~ 556 (632)
.+. | |.| +. -.-+|-++++.+.+.++. ... ...+++.+. ++||.+|..
T Consensus 735 ~l~~~------p~V---~~--VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~--------------- 788 (817)
T PLN02974 735 AISSL------PNV---ER--VVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL--------------- 788 (817)
T ss_pred HHhhC------CCe---eE--EEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec---------------
Confidence 332 2 322 11 023577888887653221 111 123444444 688887621
Q ss_pred hhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 557 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 557 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+ .+||+.+.++++.||++++++.|.+-|
T Consensus 789 -------------------------G-nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 789 -------------------------G-NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred -------------------------C-CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 1 489999999999999999999988754
No 386
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=96.96 E-value=0.34 Score=52.31 Aligned_cols=175 Identities=14% Similarity=0.138 Sum_probs=102.2
Q ss_pred HHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC-CC---C-CCC--eEE-EeccccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY-PF---M-SVK--NLL-TVYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl-~~---~-~gd--~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
++-+.+.+.++-..-+ .|.|..|+|+|...++..- .+ + +-+ +++ ....||......|.- .+..-...
T Consensus 102 ~l~~~l~~~~~~~~~~-rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~----~~~s~y~~ 176 (433)
T KOG1401|consen 102 ELEEVLSAVLGKGSAE-RVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSV----TGNSKYGL 176 (433)
T ss_pred HHHHHHHhcccCCCcc-EEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHh----hcccccCC
Confidence 4556666666322111 6999999999998876532 11 1 112 255 556788755555431 12222223
Q ss_pred eccC--Cc----cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc-h---H-HHHHHhhCCcEEEEeccccC-C
Q 006746 246 EFSW--PR----LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP-Y---L-WMRIAQENDWHILIDACALG-P 313 (632)
Q Consensus 246 ~~~~--~~----~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p-l---~-i~~~a~~~g~~vlvDaaq~~-g 313 (632)
|+++ |+ ..-|.+++++.+..++ ..+..|++-.+.-..|...+ - . +.++|+++|+++|.|-.|.+ +
T Consensus 177 ~~~p~~p~v~~~~ynd~t~l~k~~~~h~---~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~g 253 (433)
T KOG1401|consen 177 PFDPIAPDVVTAEYNDSTALEKLFESHK---GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLG 253 (433)
T ss_pred CCCCCCCceeecccCCHHHHHHHHHhCC---CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCcc
Confidence 3321 11 0126889999998754 23566666666655555532 2 2 45789999999999998875 3
Q ss_pred CCCCCCCCC---CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCC
Q 006746 314 KDMDSFGLS---LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDN 360 (632)
Q Consensus 314 ~~m~~ldls---~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~ 360 (632)
.. ..+-.. ...||.++.. |.+|. .-=+|+..|++++++.+.+.
T Consensus 254 R~-g~~~a~e~~~~~PDI~t~a--K~L~g-GlPigA~~v~~kV~~~i~~~ 299 (433)
T KOG1401|consen 254 RL-GYGWAQEYFGVTPDITTVA--KPLGG-GLPIGATGVRDKVAEMISPG 299 (433)
T ss_pred cc-chHHHHHHhCcCCcceeeh--hhccC-CceeEEEeehHHHHhhcCCC
Confidence 20 111111 1367876654 75543 23489999999998877653
No 387
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=96.94 E-value=0.055 Score=56.23 Aligned_cols=142 Identities=18% Similarity=0.178 Sum_probs=88.6
Q ss_pred eCCHHHHHHHHHhhCCCCCCCe-EEEe---ccccchhhHHHHHHHHhcC-CEEEEEec-cCCccccCHHHHHHHHHhcCc
Q 006746 195 TANRTSAFKLLAESYPFMSVKN-LLTV---YDYESEAVEAMIRTSEKRG-ARVMSAEF-SWPRLRINSEKLRKMVVSKGK 268 (632)
Q Consensus 195 t~naT~al~lv~~sl~~~~gd~-ilt~---~d~~s~~v~~~~~~a~~~G-~~v~~v~~-~~~~~~i~~~~l~~~i~~~~~ 268 (632)
+-++|.|+.+.++-+.---+++ |.++ .+.| ..+.++.| ..|..-+. +...-.+|.+.+..-|....
T Consensus 105 slsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH-------~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~AP- 176 (410)
T KOG1412|consen 105 SLSGTGALRIAADFLATFYNKNTVYVSNPTWENH-------HAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAP- 176 (410)
T ss_pred eccccchhhhhHHHHHHhcccceeEecCCchhHH-------HHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCC-
Confidence 3478999999887663112344 3222 1222 11336678 34444443 22445678888888887654
Q ss_pred CCCceeEEEEecc-CCCCccccchH-HHHHH---hhCCcEEEEecc-ccCCCCCCCCCCCCC--------CC-cEEEEcc
Q 006746 269 KKKQRGLFVFPLH-SRMTGARYPYL-WMRIA---QENDWHILIDAC-ALGPKDMDSFGLSLV--------RP-DFLICSF 333 (632)
Q Consensus 269 ~~~~~~Lv~~~~~-sn~TG~~~pl~-i~~~a---~~~g~~vlvDaa-q~~g~~m~~ldls~~--------~~-Df~~~S~ 333 (632)
...++++.++ .|+||.-.--+ |..++ +..+.+.+.|.| |.... .++|-+.| +. =|++=||
T Consensus 177 ---e~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfAS--GD~~~DawAiR~fV~~g~e~fv~QSF 251 (410)
T KOG1412|consen 177 ---EGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFAS--GDLDADAWAIRYFVEQGFELFVCQSF 251 (410)
T ss_pred ---CCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhccccc--CCccccHHHHHHHHhcCCeEEEEhhh
Confidence 3356666665 89999987666 76655 567899999986 55443 35555444 32 3666788
Q ss_pred ccccCCCCCceEEEEE
Q 006746 334 YQIFGENPSGFGCLFV 349 (632)
Q Consensus 334 hK~~G~~P~G~G~L~V 349 (632)
-|-||.+-.-+|+|-|
T Consensus 252 aKNfGlYneRvGnltv 267 (410)
T KOG1412|consen 252 AKNFGLYNERVGNLTV 267 (410)
T ss_pred hhhcccccccccceEE
Confidence 9977766667888865
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.85 E-value=0.015 Score=59.93 Aligned_cols=148 Identities=11% Similarity=0.111 Sum_probs=97.2
Q ss_pred HHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhH---HHH----HHHHhcCCEEEEEecc
Q 006746 176 KKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVE---AMI----RTSEKRGARVMSAEFS 248 (632)
Q Consensus 176 R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~---~~~----~~a~~~G~~v~~v~~~ 248 (632)
.+-.|+.||+...-...-|. |+|.|+..++.++ ++|||++++....|-..+. .|+ ...+..|+..+.+|+.
T Consensus 71 e~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~-LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt 148 (416)
T COG4100 71 ERVYAQVFGAEAALVRPQII-SGTHAIACALFGI-LRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLT 148 (416)
T ss_pred HHHHHHHhccccceeeeeee-cchhHHHHHHHhc-cCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccc
Confidence 34467889986432233333 8899999999998 8999997643322211121 221 2356778999999997
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcc-------ccchH-HHHHHhhC--CcEEEEeccccC-CCCCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA-------RYPYL-WMRIAQEN--DWHILIDACALG-PKDMD 317 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~-------~~pl~-i~~~a~~~--g~~vlvDaaq~~-g~~m~ 317 (632)
+++.+|.+.+++.+.++| +|+.+.- ..|. +-.++ +++..|+. ++.+.||-|-.- -....
T Consensus 149 -~~gkiD~~~v~~~i~~~t------kli~IQR---S~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~E 218 (416)
T COG4100 149 -ADGKIDIQAVKTAISDRT------KLIGIQR---SKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKE 218 (416)
T ss_pred -cCCcccHHHHHHhcCccc------eEEEEEe---ccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccC
Confidence 789999999999998765 7876643 3332 22344 45555653 789999987322 11113
Q ss_pred CCCCCCCCCcEEEEccccccC
Q 006746 318 SFGLSLVRPDFLICSFYQIFG 338 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G 338 (632)
|.+ .++|.++.|.-|--|
T Consensus 219 Pt~---vGaDliAGSLIKNpG 236 (416)
T COG4100 219 PTH---VGADLIAGSLIKNPG 236 (416)
T ss_pred ccc---cchhhhccceeeCCC
Confidence 433 478999999999443
No 389
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.76 E-value=0.2 Score=53.74 Aligned_cols=149 Identities=13% Similarity=0.217 Sum_probs=91.1
Q ss_pred HHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEecc-ccchhhHHHHHHHHhcCCEEEEEeccCCcc
Q 006746 174 AMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYD-YESEAVEAMIRTSEKRGARVMSAEFSWPRL 252 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d-~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~ 252 (632)
+..++|++|+|+.. .|++..+-+ ++..++.+| -++||-+..+.. +++ ...++ ++.+ -.+.+...
T Consensus 143 dlE~~iakF~G~E~---aivYs~gF~-ti~S~ipaf-sKrGDIi~~de~~nfa-Iq~Gl-qlSR---S~i~~Fkh----- 207 (467)
T KOG1358|consen 143 DLEKRIAKFMGTED---AIVYSYGFS-TIESAIPAF-SKRGDIIFVDEAVNFA-IQKGL-QLSR---STISYFKH----- 207 (467)
T ss_pred ccHHHHHHhhCCcc---eeeeccccc-hhhhcchhh-hccCcEEEEehhhhHH-HHHHH-hhhh---heeEEecC-----
Confidence 56788999999964 577765443 344444555 356776544332 111 22221 1222 23334332
Q ss_pred ccCHHHHHHHHHhcC----cCCC---ceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC-------CC
Q 006746 253 RINSEKLRKMVVSKG----KKKK---QRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-------MD 317 (632)
Q Consensus 253 ~i~~~~l~~~i~~~~----~~~~---~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-------m~ 317 (632)
.|.++++..+.+.+ +.++ ..+.+++-.....||.+.|+. |+++..++...+++|-+-+.|.- -.
T Consensus 208 -ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvte 286 (467)
T KOG1358|consen 208 -NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTE 286 (467)
T ss_pred -CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccc
Confidence 36677776654432 1111 256678888999999999999 99999999999999986444320 01
Q ss_pred CCCCCCCCCcEEEEccccccC
Q 006746 318 SFGLSLVRPDFLICSFYQIFG 338 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G 338 (632)
-.+++.-.+|.+++|.--.++
T Consensus 287 H~~v~~~~iDiv~~sm~~ala 307 (467)
T KOG1358|consen 287 HFGVPITDIDIVTASMETALA 307 (467)
T ss_pred cCCCCccceeeeeeccccccc
Confidence 233344567999999877555
No 390
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=96.57 E-value=0.016 Score=61.70 Aligned_cols=130 Identities=14% Similarity=0.144 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEE
Q 006746 172 ESAMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 172 ~~~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
+.-+|+.+|+|+- ++|+ +|.+|.+++.|++.+..-+--.+.+-|+++. .|+ .+. +.++ ..|...+-
T Consensus 115 v~~vR~~VA~~I~rRDG~p~~p~--dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYP--LYs--Ati~-l~~~~~v~ 187 (475)
T KOG0258|consen 115 VPGVRKHVAEFIERRDGIPADPE--DIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYP--LYS--ATIS-LLGGTQVP 187 (475)
T ss_pred ChhHHHHHHHHHHhccCCCCCHH--HeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCc--hhH--HHHH-HhCCcccc
Confidence 3468888888875 3344 7999999999999999877444555577653 555 222 2222 34554433
Q ss_pred EeccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEecc
Q 006746 245 AEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 245 v~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaa 309 (632)
.-++. ....+|.++|++.+++.. +.-++++.++-..-|+||..+. ++ |++.|++.|+.++-|-+
T Consensus 188 YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEV 256 (475)
T KOG0258|consen 188 YYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEV 256 (475)
T ss_pred eeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHH
Confidence 33432 345689999999998865 3346788888888999999985 56 77889999999999986
No 391
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.34 E-value=0.24 Score=52.58 Aligned_cols=203 Identities=15% Similarity=0.097 Sum_probs=121.7
Q ss_pred CCceEee---cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc
Q 006746 107 SNHTCLD---YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL 183 (632)
Q Consensus 107 ~~~vyLD---~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l 183 (632)
+..||.| -.|+|-++..|+.++..= |- + |++. .-+...+..+.+.|
T Consensus 44 Sedv~IDLLTDSGTgams~~qwaamm~G-------------DE-----A-----------Yags--rs~~~L~~avkdif 92 (471)
T COG3033 44 SEDVFIDLLTDSGTGAMTDKQWAAMMRG-------------DE-----A-----------YAGS--RSYYALADAVKDIF 92 (471)
T ss_pred ccceEEEeeccCCcccccHHHHHHHhcc-------------ch-----h-----------hccc--ccHHHHHHHHHHhc
Confidence 4566655 478999999999997541 11 0 1111 11235667778888
Q ss_pred CCCCCCccEEEeCCHHHHHHHHHhhC----CCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCC--------
Q 006746 184 NISENDYGMVFTANRTSAFKLLAESY----PFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWP-------- 250 (632)
Q Consensus 184 ~a~~~ey~vvft~naT~al~lv~~sl----~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~-------- 250 (632)
|-. -++-|.-+-.|=+++...+ ...+|++.+ .+.-|+- .. +.-.+..|+.++-++++..
T Consensus 93 Gfq----~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~Fd-TT---r~h~~~ng~~~~n~~~~ea~d~~~~~p 164 (471)
T COG3033 93 GFQ----YTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFD-TT---RGHIQINGATPRNVYVDEAFDTEVKYP 164 (471)
T ss_pred Cce----eeeeccCCccHHHHHHHHHhhhccccCCccccccccceec-ch---hHHHHhcCCccccccccccccccccCC
Confidence 863 3566777777777766554 134565533 3444442 12 2233668888887766421
Q ss_pred -ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-ccccchH----HHHHHhhCCcEEEEeccccCCC----CCCCCC
Q 006746 251 -RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYPYL----WMRIAQENDWHILIDACALGPK----DMDSFG 320 (632)
Q Consensus 251 -~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~pl~----i~~~a~~~g~~vlvDaaq~~g~----~m~~ld 320 (632)
.|.+|++.|++.|++-. ..++-.++.+.-+|.. |...+++ ..++|+++++.|+.|+|-.+-. .+..-+
T Consensus 165 FKGd~D~~kLe~lidevG--~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~g 242 (471)
T COG3033 165 FKGNFDLEKLERLIDEVG--ADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPG 242 (471)
T ss_pred CCCccCHHHHHHHHHHhC--cccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcc
Confidence 36789999999998743 2234445555444444 4434443 3578999999999999765521 012222
Q ss_pred CCCC-----------CCcEEEEcccc-ccCCCCCceEEEEEeCCC
Q 006746 321 LSLV-----------RPDFLICSFYQ-IFGENPSGFGCLFVKKST 353 (632)
Q Consensus 321 ls~~-----------~~Df~~~S~hK-~~G~~P~G~G~L~Vr~~~ 353 (632)
-..| -+|.++.|.-| .+- +- -|+|..|++.
T Consensus 243 Yrd~sI~~IarEm~sYaD~~~mS~KKD~lv--nm-GGfl~~~D~~ 284 (471)
T COG3033 243 YRDWSIEEIAREMYSYADGCTMSAKKDGLV--NM-GGFLCFKDDS 284 (471)
T ss_pred cccccHHHHHHHHHhhhhhheeecccccee--cc-ccEEEecCcc
Confidence 3322 45999999999 333 22 2677777764
No 392
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=92.82 E-value=5.3 Score=41.77 Aligned_cols=350 Identities=14% Similarity=0.139 Sum_probs=180.5
Q ss_pred cCCCCceEeecC----CCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHH
Q 006746 104 LSLSNHTCLDYF----GIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRI 179 (632)
Q Consensus 104 L~~~~~vyLD~a----g~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~i 179 (632)
+++++.-|||-. -.|---+.|+++....+.+.+ ..++.+ ..++++-+|...
T Consensus 42 fDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~---------------------tN~RFl----hd~lv~cA~~l~ 96 (452)
T KOG1403|consen 42 FDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATIS---------------------TNNRFL----HDELVQCARTLT 96 (452)
T ss_pred eccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhc---------------------ccchhh----HHHHHHHHHHHh
Confidence 555566677643 345566677777655443221 122222 246777777777
Q ss_pred HHHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCC-CCeEEEeccccchhhHHHHHHH---HhcCC---E---EEEEecc
Q 006746 180 MDFLNISENDYGMVFTANRTSAFKLLAESY-PFMS-VKNLLTVYDYESEAVEAMIRTS---EKRGA---R---VMSAEFS 248 (632)
Q Consensus 180 a~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~-gd~ilt~~d~~s~~v~~~~~~a---~~~G~---~---v~~v~~~ 248 (632)
..+=+.+ .+.|++++++|..++++-- .|.. .|.|++..-||.. +....+.. -.+|. + |+.+|..
T Consensus 97 stlPeLs----vc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGH-l~s~mE~SPYKF~~g~~v~kpd~VHVAPcP 171 (452)
T KOG1403|consen 97 STLPELS----VCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGH-LQSVMEVSPYKFNQGGGVAKPDYVHVAPCP 171 (452)
T ss_pred hcCCCce----EEEEecCCchhhHHHHHHHHhhcccCceEEEechhccc-eeeeeeccceeccCCCCcCCCceeEecCCc
Confidence 7665543 6899999999999876532 2333 3445566555542 22212221 01121 1 2222321
Q ss_pred C-Cc-------------cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H----HHHHhhCCcEEEEecc
Q 006746 249 W-PR-------------LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W----MRIAQENDWHILIDAC 309 (632)
Q Consensus 249 ~-~~-------------~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i----~~~a~~~g~~vlvDaa 309 (632)
. -. +..-.+++++.+.+...+...+..|.--.-.+.-|.++|-+ . ....|..|-..+.|-+
T Consensus 172 DvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEV 251 (452)
T KOG1403|consen 172 DVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEV 251 (452)
T ss_pred cccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehh
Confidence 0 00 11223556666654322122222233333445788888865 3 3455778999999998
Q ss_pred ccC-CC---CCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCC
Q 006746 310 ALG-PK---DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCE 385 (632)
Q Consensus 310 q~~-g~---~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~ 385 (632)
|.+ |. ..=.+.+-.+-||.+... |-.|- ..-++++..+++..+.+... |. . |+.
T Consensus 252 QvGFGRvG~hyWafq~y~fiPDIVtmg--KpmGN-GhPVa~VattkeIA~Af~at---gv-~-------YFN-------- 309 (452)
T KOG1403|consen 252 QVGFGRVGSHYWAFQTYNFIPDIVTMG--KPMGN-GHPVAAVATTKEIAQAFHAT---GV-E-------YFN-------- 309 (452)
T ss_pred hhcccccchhhhhhhhhccccchheec--ccCCC-CCeeeEEeccHHHHHHhccc---cc-e-------ehh--------
Confidence 875 21 000111222345655443 52221 12256666666655433321 11 0 110
Q ss_pred CCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHH
Q 006746 386 TEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTM 465 (632)
Q Consensus 386 ~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~ 465 (632)
. .+|. |.+ . ..+|..++.+--++
T Consensus 310 --------T----yGGn-PVs------------------C--------------------------Av~laVm~v~e~E~ 332 (452)
T KOG1403|consen 310 --------T----YGGN-PVS------------------C--------------------------AVGLAVMRVCEDEN 332 (452)
T ss_pred --------c----cCCC-chh------------------H--------------------------HHHHHHHHHHhhhh
Confidence 0 0111 110 0 13444555555678
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEE---EccCCCC----ccCHHHHHHHHHhCCcEE
Q 006746 466 ISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN---VFDWKRE----KIEPVLVQKLADRENISL 538 (632)
Q Consensus 466 I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFn---v~~~~G~----~i~~~~V~kla~~~gI~l 538 (632)
+++|.+...++|...|.+++-.+ ++.|+ -||-=+-+- +.|.+-. ......|.+|-+.++|-+
T Consensus 333 Lq~ha~~vG~~L~~lL~~~k~kh-------~~IGD----vRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLl 401 (452)
T KOG1403|consen 333 LQEHAQQVGEKLEVLLRRLKQKH-------ECIGD----VRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLL 401 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhc-------cceec----cccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEE
Confidence 89999999999999998875322 33454 244222111 1222111 111223445555556665
Q ss_pred ccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 539 SYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 539 r~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
++ ++....++.+-+...-|+|+++.++..|.+.|.
T Consensus 402 sa--------------------------------------DGPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 402 SA--------------------------------------DGPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred ec--------------------------------------CCCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 42 223446888888999999999999999988875
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=92.74 E-value=5.4 Score=42.66 Aligned_cols=77 Identities=17% Similarity=0.260 Sum_probs=48.9
Q ss_pred CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccCCCCC------CCCCCCC
Q 006746 255 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALGPKDM------DSFGLSL 323 (632)
Q Consensus 255 ~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~g~~m------~~ldls~ 323 (632)
++++++++|.+..+++..+.-+++--+...-|--+- .. +-++++++|+.++||-+|.+|..- .-.+|+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~- 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD- 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC-
Confidence 356677778765444434444445444455665442 33 667899999999999999885310 234443
Q ss_pred CCCcEEEEc
Q 006746 324 VRPDFLICS 332 (632)
Q Consensus 324 ~~~Df~~~S 332 (632)
.+||++.||
T Consensus 333 ~PpD~vTFS 341 (484)
T KOG1405|consen 333 SPPDVVTFS 341 (484)
T ss_pred CCccceehh
Confidence 478988876
No 394
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=85.01 E-value=2.2 Score=40.52 Aligned_cols=45 Identities=13% Similarity=0.114 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcC----CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe
Q 006746 173 SAMKKRIMDFLN----ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV 220 (632)
Q Consensus 173 ~~~R~~ia~~l~----a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~ 220 (632)
+.+.+.+.+.+| ++++ .|++|++++.|+.+++..+ ..+||.|++.
T Consensus 99 ~AiA~~l~~~~g~~v~~~pd--~Ivvt~Ga~~al~~l~~~l-~dpGD~VlVp 147 (153)
T PLN02994 99 KAIANFMAEARGGRVKFDAD--MIVLSAGATAANEIIMFCI-ADPGDAFLVP 147 (153)
T ss_pred HHHHHHHHHHhCCCCccchh--heEEcCCHHHHHHHHHHHH-cCCCCEEEEe
Confidence 333344444435 3444 7999999999999999999 7899997754
No 395
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=73.69 E-value=66 Score=34.68 Aligned_cols=147 Identities=13% Similarity=0.136 Sum_probs=86.8
Q ss_pred cEEEeC--CHHHHHHHHHhhCC-CCCCCeEEEe---ccccchhhHHHHHHHHhcCCEEEEEec-cCCccccCHHHHHHHH
Q 006746 191 GMVFTA--NRTSAFKLLAESYP-FMSVKNLLTV---YDYESEAVEAMIRTSEKRGARVMSAEF-SWPRLRINSEKLRKMV 263 (632)
Q Consensus 191 ~vvft~--naT~al~lv~~sl~-~~~gd~ilt~---~d~~s~~v~~~~~~a~~~G~~v~~v~~-~~~~~~i~~~~l~~~i 263 (632)
.|++++ ++|.|+++.++-+. |-++..|.++ ..+|.+.. +..|+.+....- +..+..+|.+.+.+-|
T Consensus 120 Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if-------~~ag~~~~~yrYyd~~t~gld~~g~ledl 192 (427)
T KOG1411|consen 120 RIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIF-------KDAGLPVKFYRYYDPKTRGLDFKGMLEDL 192 (427)
T ss_pred ceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccc-------cccCcceeeeeeccccccccchHHHHHHH
Confidence 566655 79999999887653 4456665432 23333222 345777766643 2345567776666656
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEecc-ccCCCCCCCCCCCCC--------CCc-EE
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDAC-ALGPKDMDSFGLSLV--------RPD-FL 329 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaa-q~~g~~m~~ldls~~--------~~D-f~ 329 (632)
.+.. ...-++.-....|+||+---.+ | .+..++.+.+-++|.+ |.... .++|-+.+ +.+ ++
T Consensus 193 ~~~p---~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaS--G~~d~DA~avR~F~~~g~~~~l 267 (427)
T KOG1411|consen 193 GEAP---EGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFAS--GDLDKDAQAVRLFVEDGHEILL 267 (427)
T ss_pred hcCC---CCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhccccc--CCchhhHHHHHHHHHcCCceEe
Confidence 5432 1122233333678999876666 5 4566788999999987 44432 45655431 334 44
Q ss_pred EEccccccCCCCCceEEEEE
Q 006746 330 ICSFYQIFGENPSGFGCLFV 349 (632)
Q Consensus 330 ~~S~hK~~G~~P~G~G~L~V 349 (632)
+=|+-|-+|.+..-+|+|-|
T Consensus 268 aQSyAKNMGLYgERvGa~sv 287 (427)
T KOG1411|consen 268 AQSYAKNMGLYGERVGALSV 287 (427)
T ss_pred ehhhhhhcchhhhccceeEE
Confidence 55666866655567788754
No 396
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=66.25 E-value=35 Score=36.71 Aligned_cols=163 Identities=14% Similarity=0.126 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCC--CCC---eEEEeccccchhhHHHHHHHHhcCCEEE
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFM--SVK---NLLTVYDYESEAVEAMIRTSEKRGARVM 243 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~--~gd---~ilt~~d~~s~~v~~~~~~a~~~G~~v~ 243 (632)
.++.+.+|+.=.-.=||-.+++.|||..+.|+.++.+..++.-. +.. +|+...-|-+ +.....++.+... .+
T Consensus 46 ~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~-~Y~~qt~~f~s~~--y~ 122 (363)
T PF04864_consen 46 PELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYS-SYPEQTDFFDSRL--YK 122 (363)
T ss_dssp HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--C-HHHHHCCCT-BTT--EE
T ss_pred HHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCcc-chHHHHHhccccC--cc
Confidence 45555555544444457667889999999999999999988422 222 3565444443 2333222222111 11
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCCC
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSL 323 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~ 323 (632)
+.. + .. .+. .+. +...-+=.++..+|+.|.+.- .+++..+..+|-|-|-+.|+- -++. +.
T Consensus 123 w~G-d-a~------~~~---~~~---~~~~~IElVTSPNNPDG~lr~----~V~~g~~~k~I~D~AYYWPhy-TpI~-~~ 182 (363)
T PF04864_consen 123 WAG-D-AS------NFK---NSD---NPSPYIELVTSPNNPDGQLRE----AVLNGSSGKVIHDLAYYWPHY-TPIT-AP 182 (363)
T ss_dssp EEE-E-CC------CGT---T-S----CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTT-S----S-
T ss_pred ccc-c-HH------hhc---cCC---CCCCeEEEEeCCCCCcccccc----hhcCCCCcceeeeeeeecccc-cccC-CC
Confidence 211 1 00 000 110 112345577888899998642 124666778899999999873 4554 23
Q ss_pred CCCcEEEEccccccCCCCCceEEEEEeCCCc
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLFVKKSTV 354 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~ 354 (632)
.+=|.+.|+.-|+-|....-+|-.+||++..
T Consensus 183 aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~V 213 (363)
T PF04864_consen 183 ADHDIMLFTLSKLTGHAGSRFGWALVKDEEV 213 (363)
T ss_dssp B--SEEEEEHHHHCS-GGG-EEEEEES-HHH
T ss_pred CCCceEEEEEecccCccccccceeeecCHHH
Confidence 4559999999998774455689999998653
No 397
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=60.85 E-value=70 Score=28.14 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=53.8
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.+.|.-....+..+.++.|.+|..+..+ ++.+++.+.+.+. ++.++.++.. .+....... +++.+|+
T Consensus 10 ~~~~~lGl~~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~~-----~pd~V~iS~~--~~~~~~~~~~l~~~~k~ 77 (121)
T PF02310_consen 10 GEVHPLGLLYLAAYLRKAGHEVDILDAN-----VPPEELVEALRAE-----RPDVVGISVS--MTPNLPEAKRLARAIKE 77 (121)
T ss_dssp TSSTSHHHHHHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHHT-----TCSEEEEEES--SSTHHHHHHHHHHHHHT
T ss_pred CcchhHHHHHHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhcC-----CCcEEEEEcc--CcCcHHHHHHHHHHHHh
Confidence 4555545556677788899999988764 4558888877754 3578888664 344444555 8888877
Q ss_pred C--CcEEEEeccc
Q 006746 300 N--DWHILIDACA 310 (632)
Q Consensus 300 ~--g~~vlvDaaq 310 (632)
. ++.+++=+.+
T Consensus 78 ~~p~~~iv~GG~~ 90 (121)
T PF02310_consen 78 RNPNIPIVVGGPH 90 (121)
T ss_dssp TCTTSEEEEEESS
T ss_pred cCCCCEEEEECCc
Confidence 6 7899987754
No 398
>PF10518 TAT_signal: TAT (twin-arginine translocation) pathway signal sequence; InterPro: IPR019546 The twin-arginine translocation (Tat) pathway serves the role of transporting folded proteins across energy-transducing membranes []. Homologues of the genes that encode the transport apparatus occur in archaea, bacteria, chloroplasts, and plant mitochondria []. In bacteria, the Tat pathway catalyses the export of proteins from the cytoplasm across the inner/cytoplasmic membrane. In chloroplasts, the Tat components are found in the thylakoid membrane and direct the import of proteins from the stroma. The Tat pathway acts separately from the general secretory (Sec) pathway, which transports proteins in an unfolded state []. It is generally accepted that the primary role of the Tat system is to translocate fully folded proteins across membranes. An example of proteins that need to be exported in their 3D conformation are redox proteins that have acquired complex multi-atom cofactors in the bacterial cytoplasm (or the chloroplast stroma or mitochondrial matrix). They include hydrogenases, formate dehydrogenases, nitrate reductases, trimethylamine N-oxide (TMAO) reductases and dimethyl sulphoxide (DMSO) reductases [, ]. The Tat system can also export whole heteroligomeric complexes in which some proteins have no Tat signal. This is the case of the DMSO reductase or formate dehydrogenase complexes. But there are also other cases where the physiological rationale for targeting a protein to the Tat signal is less obvious. Indeed, there are examples of homologous proteins that are in some cases targeted to the Tat pathway and in other cases to the Sec apparatus. Some examples are: copper nitrite reductases, flavin domains of flavocytochrome c and N-acetylmuramoyl-L-alanine amidases []. In halophilic archaea such as Halobacterium almost all secreted proteins appear to be Tat targeted. It has been proposed to be a response to the difficulties these organisms would otherwise face in successfully folding proteins extracellularly at high ionic strength []. The Tat signal peptide consists of three motifs: the positively charged N-terminal motif, the hydrophobic region and the C-terminal region that generally ends with a consensus short motif (A-x-A) specifying cleavage by signal peptidase. Sequence analysis revealed that signal peptides capable of targeting the Tat protein contain the consensus sequence [ST]-R-R-x-F-L-K. The nearly invariant twin-arginine gave rise to the pathway's name. In addition the h-region of Tat signal peptides is typically less hydrophobic than that of Sec-specific signal peptides [, ].
Probab=59.41 E-value=4.4 Score=26.53 Aligned_cols=12 Identities=33% Similarity=0.304 Sum_probs=9.6
Q ss_pred hhhhhHHHHhhc
Q 006746 45 DCRRDFAAVTAS 56 (632)
Q Consensus 45 ~~~~~f~~~~~~ 56 (632)
-+||+|||+++.
T Consensus 2 ~sRR~fLk~~~a 13 (26)
T PF10518_consen 2 LSRRQFLKGGAA 13 (26)
T ss_pred CcHHHHHHHHHH
Confidence 379999997664
No 399
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=43.67 E-value=1.3e+02 Score=26.53 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=57.2
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.|.|.--..-+..+.+..|.+|..+.. .+..+++.+.+.+. +..++.++.. .+-....+. +++.+|+
T Consensus 9 ~e~H~lG~~~~~~~l~~~G~~V~~lg~-----~~~~~~l~~~~~~~-----~pdvV~iS~~--~~~~~~~~~~~i~~l~~ 76 (119)
T cd02067 9 GDGHDIGKNIVARALRDAGFEVIDLGV-----DVPPEEIVEAAKEE-----DADAIGLSGL--LTTHMTLMKEVIEELKE 76 (119)
T ss_pred CchhhHHHHHHHHHHHHCCCEEEECCC-----CCCHHHHHHHHHHc-----CCCEEEEecc--ccccHHHHHHHHHHHHH
Confidence 466643334446677889999976643 26778888887754 3567777654 223334555 7787777
Q ss_pred C---CcEEEEeccccCCCCCCCCCCCCCCCcEEEEc
Q 006746 300 N---DWHILIDACALGPKDMDSFGLSLVRPDFLICS 332 (632)
Q Consensus 300 ~---g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S 332 (632)
. ++.+++=+.+.... +--+...++|.++..
T Consensus 77 ~~~~~~~i~vGG~~~~~~---~~~~~~~G~D~~~~~ 109 (119)
T cd02067 77 AGLDDIPVLVGGAIVTRD---FKFLKEIGVDAYFGP 109 (119)
T ss_pred cCCCCCeEEEECCCCChh---HHHHHHcCCeEEECC
Confidence 5 46666655433221 112344566776643
No 400
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=41.39 E-value=3.4e+02 Score=28.85 Aligned_cols=77 Identities=12% Similarity=0.026 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCe--EEEeccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKN--LLTVYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~--ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
-+.+++++++|++.--.--.+-.+|.|.+-+.++..++..- ...|.+ |+.....|..--.-|....++.|+++..++
T Consensus 99 i~~~~~a~~~ia~~~a~~i~dg~~IlTh~~S~~v~~~l~~A-~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~ 177 (301)
T COG1184 99 IDRVEKAKERIAEIGAERIHDGDVILTHSFSKTVLEVLKTA-ADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV 177 (301)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCEEEEecCcHHHHHHHHHh-hhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe
Confidence 34556677777654332222346888887776666555544 244553 444445554444456666678898887774
No 401
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=38.62 E-value=2.5e+02 Score=27.55 Aligned_cols=96 Identities=9% Similarity=0.069 Sum_probs=59.8
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
-|.|.--..-+..+.+..|.+|..+..+ +..+++.+.+.+. ++.++.++..... ....+. +++..|+
T Consensus 92 gd~H~lG~~~v~~~l~~~G~~vi~lG~~-----~p~~~l~~~~~~~-----~~d~v~lS~~~~~--~~~~~~~~i~~lr~ 159 (201)
T cd02070 92 GDIHDIGKNLVATMLEANGFEVIDLGRD-----VPPEEFVEAVKEH-----KPDILGLSALMTT--TMGGMKEVIEALKE 159 (201)
T ss_pred CccchHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc-----CCCEEEEeccccc--cHHHHHHHHHHHHH
Confidence 3666533344456678899999877644 6778998888764 3578888776433 345566 7777777
Q ss_pred C----CcEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 006746 300 N----DWHILIDACALGPKDMDSFGLSLVRPDFLICSF 333 (632)
Q Consensus 300 ~----g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~ 333 (632)
. ++.+++=+...-. .+ ....++|+++-+.
T Consensus 160 ~~~~~~~~i~vGG~~~~~----~~-~~~~GaD~~~~da 192 (201)
T cd02070 160 AGLRDKVKVMVGGAPVNQ----EF-ADEIGADGYAEDA 192 (201)
T ss_pred CCCCcCCeEEEECCcCCH----HH-HHHcCCcEEECCH
Confidence 5 4677776543221 11 2345667766543
No 402
>PRK00955 hypothetical protein; Provisional
Probab=38.05 E-value=1.9e+02 Score=33.88 Aligned_cols=89 Identities=21% Similarity=0.244 Sum_probs=56.0
Q ss_pred CCCCCCCeEEEe----ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEE-e----
Q 006746 209 YPFMSVKNLLTV----YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVF-P---- 279 (632)
Q Consensus 209 l~~~~gd~ilt~----~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~-~---- 279 (632)
..|..=|-|+++ .||++-.+..+.+..+..|.+|-.+.- |+.. +.++++++-.+ +|+.+ +
T Consensus 9 ~gw~~~d~i~v~gdayvdhp~fg~a~i~r~L~~~G~~v~ii~q--p~~~-~~~~~~~~g~P--------~l~~~vs~g~~ 77 (620)
T PRK00955 9 RGWDELDFILVTGDAYVDHPSFGTAIIGRVLEAEGFRVGIIAQ--PNWR-DLEDFKKLGKP--------RLFFLVSAGNM 77 (620)
T ss_pred cCCCccCEEEEeCcccccCCccHHHHHHHHHHHCCCEEEEecC--CCcC-ChHHHHhhCCC--------cEEEEeccccH
Confidence 335555554432 389986677778888999999988842 4444 67777765543 56654 2
Q ss_pred --ccCCCCccc-----------------cchH---HHHHHhhC--CcEEEEec
Q 006746 280 --LHSRMTGAR-----------------YPYL---WMRIAQEN--DWHILIDA 308 (632)
Q Consensus 280 --~~sn~TG~~-----------------~pl~---i~~~a~~~--g~~vlvDa 308 (632)
.+++.|..+ -+-+ .++++|+. ++.+++=+
T Consensus 78 dsmv~~yt~~~~~r~~d~ytpgg~~~~rpdra~i~y~~~ik~~~p~~~IvlGG 130 (620)
T PRK00955 78 DSMVNHYTASKKLRSKDAYSPGGKMGLRPDRATIVYCNKIKEAYPDVPIIIGG 130 (620)
T ss_pred HHHHhhcchhhhcccccccCCCCccCCCcchHHHHHHHHHHHHCCCCcEEeCC
Confidence 244555543 3333 35777764 88888866
No 403
>PF10399 UCR_Fe-S_N: Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; InterPro: IPR019470 This entry represents the TAT-signal region found in the iron-sulphur subunit of Ubiquinol-cytochrome C reductase (also known as the cytochrome bc1 complex). This enzymex is an oligomeric membrane protein complex that is a component of respiratory and photosynthetic electron transfer chains. It couples the transfer of electrons from ubiquinol to cytochrome c with the generation of a protein gradient across the membrane []. This entry is associated with IPR017941 from INTERPRO, IPR004192 from INTERPRO and IPR015248 from INTERPRO. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0055114 oxidation-reduction process; PDB: 1ZRT_R 2QJY_R 2FYN_L 2QJK_O 2QJP_I 2YIU_F.
Probab=36.60 E-value=12 Score=27.38 Aligned_cols=18 Identities=28% Similarity=0.551 Sum_probs=9.8
Q ss_pred cCchhhhhhHHHHhhccc
Q 006746 41 NTSADCRRDFAAVTASSI 58 (632)
Q Consensus 41 ~~~~~~~~~f~~~~~~~~ 58 (632)
......||+||..+++++
T Consensus 5 ~~~~~~RRdFL~~at~~~ 22 (41)
T PF10399_consen 5 EPVDPTRRDFLTIATSAV 22 (41)
T ss_dssp -----HHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHH
Confidence 345568999997665544
No 404
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=34.83 E-value=2.1e+02 Score=25.21 Aligned_cols=65 Identities=20% Similarity=0.253 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+.-+.|++-||++. .+. .=+|-.|+-+.+++-.|| +||+.. +.+ -+.-+..+|+++|+.|...+-
T Consensus 23 ~~v~~i~~~~gI~d--iN~-IKPGIgEaTRvLLRRvP~----~vLVr~~~~p--d~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 23 AEVERIAERYGISD--INL-IKPGIGEATRVLLRRVPW----KVLVRDPDDP--DLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHhCCCC--ccc-ccCChhHHHHHHHhcCCC----EEEECCCCCc--cHHHHHHHHHHcCCcEEEeCC
Confidence 56678899999973 233 358999999999998886 766543 444 466788899999999988763
No 405
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=32.53 E-value=3e+02 Score=25.49 Aligned_cols=77 Identities=9% Similarity=0.063 Sum_probs=49.6
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.|.|.-...-+..+.+..|.+|.++..+ +.++++.+.+.+. ++.+++++.... .....+. +++..++
T Consensus 13 gD~H~lG~~iv~~~lr~~G~eVi~LG~~-----vp~e~i~~~a~~~-----~~d~V~lS~~~~--~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 13 ADCHAVGNKILDRALTEAGFEVINLGVM-----TSQEEFIDAAIET-----DADAILVSSLYG--HGEIDCRGLREKCIE 80 (137)
T ss_pred CChhHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc-----CCCEEEEcCccc--cCHHHHHHHHHHHHh
Confidence 3666433444456678899999988664 6678888887654 357888876644 2333445 7777776
Q ss_pred C---CcEEEEecc
Q 006746 300 N---DWHILIDAC 309 (632)
Q Consensus 300 ~---g~~vlvDaa 309 (632)
. ++.+++=++
T Consensus 81 ~~~~~~~i~vGG~ 93 (137)
T PRK02261 81 AGLGDILLYVGGN 93 (137)
T ss_pred cCCCCCeEEEECC
Confidence 5 556666544
No 406
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=30.61 E-value=4.6e+02 Score=25.73 Aligned_cols=96 Identities=8% Similarity=0.035 Sum_probs=60.7
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
-|.|.--..-+..+.+..|.+|.++-.+ +..+++.+.+.+. ++.++.++.....+ ...+. +++.+++
T Consensus 94 gd~H~lG~~~v~~~l~~~G~~vi~LG~~-----vp~e~~v~~~~~~-----~pd~v~lS~~~~~~--~~~~~~~i~~l~~ 161 (197)
T TIGR02370 94 GDVHDIGKNIVVTMLRANGFDVIDLGRD-----VPIDTVVEKVKKE-----KPLMLTGSALMTTT--MYGQKDINDKLKE 161 (197)
T ss_pred CchhHHHHHHHHHHHHhCCcEEEECCCC-----CCHHHHHHHHHHc-----CCCEEEEccccccC--HHHHHHHHHHHHH
Confidence 3666422333355678899999988654 6778998888764 35788887754333 33456 7888877
Q ss_pred CC----cEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 006746 300 ND----WHILIDACALGPKDMDSFGLSLVRPDFLICSF 333 (632)
Q Consensus 300 ~g----~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~ 333 (632)
.| +.++|=+...-+ .+ ....++|+++-+.
T Consensus 162 ~~~~~~v~i~vGG~~~~~----~~-~~~~gad~~~~da 194 (197)
T TIGR02370 162 EGYRDSVKFMVGGAPVTQ----DW-ADKIGADVYGENA 194 (197)
T ss_pred cCCCCCCEEEEEChhcCH----HH-HHHhCCcEEeCCh
Confidence 63 678886654421 11 2345677776543
No 407
>TIGR01409 TAT_signal_seq Tat (twin-arginine translocation) pathway signal sequence. Members with small amino acid side chains at the -1 and -3 positions from the C-terminus of the model should be predicted to be cleaved as are Sec pathway signal sequences. Members are almost exclusively bacterial, although archaeal sequences are also found. A large fraction of the members of this family may have bound redox-active cofactors.
Probab=27.30 E-value=30 Score=23.15 Aligned_cols=11 Identities=45% Similarity=0.619 Sum_probs=8.5
Q ss_pred hhhhHHHHhhc
Q 006746 46 CRRDFAAVTAS 56 (632)
Q Consensus 46 ~~~~f~~~~~~ 56 (632)
+||+|||..+.
T Consensus 2 sRR~Flk~~~~ 12 (29)
T TIGR01409 2 SRRDFLKGAAA 12 (29)
T ss_pred chhhhHHHHHH
Confidence 69999996543
No 408
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=26.04 E-value=3.6e+02 Score=25.01 Aligned_cols=77 Identities=8% Similarity=0.032 Sum_probs=49.7
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.|-|.--.+-+....+..|.+|..+..+ +.++++.++..+. ...++.+|.-. |.....+. +++.+++
T Consensus 11 ~D~HdiGk~iv~~~l~~~GfeVi~LG~~-----v~~e~~v~aa~~~-----~adiVglS~l~--~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 11 SDCHAVGNKILDHAFTNAGFNVVNLGVL-----SPQEEFIKAAIET-----KADAILVSSLY--GHGEIDCKGLRQKCDE 78 (134)
T ss_pred CChhhHhHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc-----CCCEEEEeccc--ccCHHHHHHHHHHHHH
Confidence 3555434445566778899999988775 5677877776653 24677776653 33344566 7888888
Q ss_pred CC---cEEEEecc
Q 006746 300 ND---WHILIDAC 309 (632)
Q Consensus 300 ~g---~~vlvDaa 309 (632)
.| ..+++=++
T Consensus 79 ~gl~~~~vivGG~ 91 (134)
T TIGR01501 79 AGLEGILLYVGGN 91 (134)
T ss_pred CCCCCCEEEecCC
Confidence 75 45555444
No 409
>TIGR02811 formate_TAT formate dehydrogenase region TAT target. Members of this uncharacterized protein family are all small, extending 70 or fewer residues from their respective likely start codons. All have the twin-arginine-dependent tranport (TAT) signal sequence at the N-terminus and a conserved 20-residue C-terminal region that includes the motif Y-[HRK]-X-[TS]-X-H-[IV]-X-X-[YF]-Y. The TAT signal sequence suggests a bound cofactor. All members are encoded near genes for subunits of formate dehydrogenase, and may themselves be a subunit or accessory protein.
Probab=24.75 E-value=33 Score=27.85 Aligned_cols=11 Identities=27% Similarity=0.274 Sum_probs=8.5
Q ss_pred hhhhhhHHHHh
Q 006746 44 ADCRRDFAAVT 54 (632)
Q Consensus 44 ~~~~~~f~~~~ 54 (632)
..+||+|||+.
T Consensus 8 ~~sRR~Flk~l 18 (66)
T TIGR02811 8 DPSRRDLLKGL 18 (66)
T ss_pred CccHHHHHHHH
Confidence 34899999943
No 410
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=24.03 E-value=5.1e+02 Score=25.84 Aligned_cols=101 Identities=10% Similarity=-0.020 Sum_probs=60.2
Q ss_pred cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC
Q 006746 222 DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN 300 (632)
Q Consensus 222 d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~ 300 (632)
|.|.--..-+..+.+..|.+|.++..+ +..+++.+.+.+. +..+++++.... -....+. +++..++.
T Consensus 99 d~HdiG~~iv~~~l~~~G~~Vi~LG~~-----vp~e~~v~~~~~~-----~~~~V~lS~~~~--~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 99 DVHDIGKNLVGVILSNNGYEVIDLGVM-----VPIEKILEAAKEH-----KADIIGLSGLLV--PSLDEMVEVAEEMNRR 166 (213)
T ss_pred chhHHHHHHHHHHHHhCCCEEEECCCC-----CCHHHHHHHHHHc-----CCCEEEEccchh--ccHHHHHHHHHHHHhc
Confidence 666422333355668899999988765 6778998888764 357888877643 3344566 77777765
Q ss_pred --CcEEEEeccccCCCCCCCCC-CCCCCCcEEEEccc
Q 006746 301 --DWHILIDACALGPKDMDSFG-LSLVRPDFLICSFY 334 (632)
Q Consensus 301 --g~~vlvDaaq~~g~~m~~ld-ls~~~~Df~~~S~h 334 (632)
++.++|=++..-..--..+. .+..++|+++-...
T Consensus 167 ~~~~~i~vGG~~~~~~~~~~~~~~~~~gad~y~~da~ 203 (213)
T cd02069 167 GIKIPLLIGGAATSRKHTAVKIAPEYDGPVVYVKDAS 203 (213)
T ss_pred CCCCeEEEEChhcCHHHHhhhhccccCCCceEecCHH
Confidence 56777765422110000000 12357788776543
No 411
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.31 E-value=8.8e+02 Score=26.19 Aligned_cols=106 Identities=14% Similarity=0.148 Sum_probs=62.7
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEE--eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCcee
Q 006746 197 NRTSAFKLLAESYPFMSVKNLLT--VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRG 274 (632)
Q Consensus 197 naT~al~lv~~sl~~~~gd~ilt--~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~ 274 (632)
+-|.-+--++.-| .+.|.+|++ ...+-+.++..|..++++.|+.|..-+-......+-.+.++.+..++ ..
T Consensus 151 GKTTTIaKLA~~l-~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~------~D 223 (340)
T COG0552 151 GKTTTIAKLAKYL-KQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARG------ID 223 (340)
T ss_pred chHhHHHHHHHHH-HHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcC------CC
Confidence 4455566666656 367888654 34566778888999999999998764311000112334555554433 45
Q ss_pred EEEEecc---CCCCccccchH-HHHHHhhCC------cEEEEecc
Q 006746 275 LFVFPLH---SRMTGARYPYL-WMRIAQEND------WHILIDAC 309 (632)
Q Consensus 275 Lv~~~~~---sn~TG~~~pl~-i~~~a~~~g------~~vlvDaa 309 (632)
++.+.-. .|-+..+-.++ |.+.++..- +++++||+
T Consensus 224 vvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAt 268 (340)
T COG0552 224 VVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDAT 268 (340)
T ss_pred EEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcc
Confidence 6666543 23344444566 666666543 77888996
No 412
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=23.12 E-value=2.3e+02 Score=31.27 Aligned_cols=91 Identities=20% Similarity=0.243 Sum_probs=59.3
Q ss_pred CCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-
Q 006746 214 VKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL- 292 (632)
Q Consensus 214 gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~- 292 (632)
|.+++.--.|....|.-..+.+-++|+.|..+ || .--|..+++.++..-+ ..+.-+--..|..+.=.+.++
T Consensus 86 GQNlvGYrhyaDDvVe~Fv~ka~~nGidvfRi-FD---AlND~RNl~~ai~a~k----k~G~h~q~~i~YT~sPvHt~e~ 157 (472)
T COG5016 86 GQNLVGYRHYADDVVEKFVEKAAENGIDVFRI-FD---ALNDVRNLKTAIKAAK----KHGAHVQGTISYTTSPVHTLEY 157 (472)
T ss_pred cCccccccCCchHHHHHHHHHHHhcCCcEEEe-ch---hccchhHHHHHHHHHH----hcCceeEEEEEeccCCcccHHH
Confidence 55665444556667777777788899988655 22 1236777887776432 123344444555666688999
Q ss_pred HHHHHhhC-----CcEEEEeccccC
Q 006746 293 WMRIAQEN-----DWHILIDACALG 312 (632)
Q Consensus 293 i~~~a~~~-----g~~vlvDaaq~~ 312 (632)
|++++++. ++..+=|++...
T Consensus 158 yv~~akel~~~g~DSIciKDmaGll 182 (472)
T COG5016 158 YVELAKELLEMGVDSICIKDMAGLL 182 (472)
T ss_pred HHHHHHHHHHcCCCEEEeecccccC
Confidence 99999873 455666988766
No 413
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=23.00 E-value=3.1e+02 Score=26.95 Aligned_cols=60 Identities=15% Similarity=0.180 Sum_probs=34.9
Q ss_pred HHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEE
Q 006746 235 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILI 306 (632)
Q Consensus 235 a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlv 306 (632)
.+..|++++.++.+ +.+.|.+++..-. .+|++....+......-..+++.|++.|+..+|
T Consensus 40 l~~~g~~vv~~d~~------~~~~l~~al~g~d------~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 40 LQALGAEVVEADYD------DPESLVAALKGVD------AVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHTTTEEEES-TT-------HHHHHHHHTTCS------EEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred hhcccceEeecccC------CHHHHHHHHcCCc------eEEeecCcchhhhhhhhhhHHHhhhccccceEE
Confidence 45679988755443 6789999998533 455554443322222222278888888875555
No 414
>smart00857 Resolvase Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.
Probab=22.71 E-value=4e+02 Score=24.12 Aligned_cols=77 Identities=10% Similarity=0.104 Sum_probs=47.4
Q ss_pred hHHHHHHHHhcCCEEEEEeccC-Cccc-cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEE
Q 006746 228 VEAMIRTSEKRGARVMSAEFSW-PRLR-INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHI 304 (632)
Q Consensus 228 v~~~~~~a~~~G~~v~~v~~~~-~~~~-i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~v 304 (632)
...+.++|+++|..+..+-.+. .++. .+-..+.++|..-. ......+++...++.+=....+. +.+.++++|+.+
T Consensus 21 ~~~~~~~a~~~g~~i~~~~~d~~~Sg~~~~Rp~l~~ll~~~~--~g~~~~ivv~~~~Rl~R~~~~~~~~~~~l~~~gi~l 98 (148)
T smart00857 21 LEALRAYAKANGWEVVRIYEDEGVSGKKADRPGLQRLLADLR--AGDIDVLVVYKLDRLGRSLRDLLALLELLEKKGVRL 98 (148)
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCcCCCCCCHHHHHHHHHHH--cCCCCEEEEeccchhhCcHHHHHHHHHHHHHCCCEE
Confidence 3456778888898875543332 1222 22334555554321 12346888888888877656666 778888999877
Q ss_pred EE
Q 006746 305 LI 306 (632)
Q Consensus 305 lv 306 (632)
++
T Consensus 99 ~~ 100 (148)
T smart00857 99 VS 100 (148)
T ss_pred EE
Confidence 65
No 415
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=22.43 E-value=4.7e+02 Score=27.73 Aligned_cols=55 Identities=9% Similarity=0.068 Sum_probs=29.1
Q ss_pred cEEEeCCHH-HHHHHHHhhCCCCCCCe--EEEeccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 191 GMVFTANRT-SAFKLLAESYPFMSVKN--LLTVYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 191 ~vvft~naT-~al~lv~~sl~~~~gd~--ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+|+|-+-| .++..+..+. +.|.+ |+.....|.+.-.-|+....+.|+.+..++-
T Consensus 122 ~~ILT~~~S~tv~~~l~~A~--~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D 179 (310)
T PRK08535 122 DVIMTHCNSSAALSVIKTAH--EQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVD 179 (310)
T ss_pred CEEEEeCCcHHHHHHHHHHH--HCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh
Confidence 467776644 4444444443 34444 4444444432222344455678999988863
No 416
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=21.97 E-value=4.4e+02 Score=27.83 Aligned_cols=72 Identities=13% Similarity=0.150 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHcC--CCCCCccEEEeCCHH-HHHHHHHhhCCCCCCCe--EEEeccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 172 ESAMKKRIMDFLN--ISENDYGMVFTANRT-SAFKLLAESYPFMSVKN--LLTVYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 172 ~~~~R~~ia~~l~--a~~~ey~vvft~naT-~al~lv~~sl~~~~gd~--ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
..+++++|+++-- .... .+|+|-+-+ .++..+..+. +.|.+ |+.....|...-.-|.....+.|+.+..++
T Consensus 98 ~~~a~~~I~~~a~~~i~~g--~~ILT~~~S~tv~~~l~~a~--~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~ 173 (301)
T TIGR00511 98 SDKAQERIGEIGAKRIRDG--DVVMTHCNSEAALSVIKTAF--EQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIV 173 (301)
T ss_pred HHHHHHHHHHHHHHHcCCC--CEEEEECCcHHHHHHHHHHH--HcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEe
Confidence 3455555544321 1122 467776544 4444444443 23443 444433443222334555567899988885
Q ss_pred c
Q 006746 247 F 247 (632)
Q Consensus 247 ~ 247 (632)
-
T Consensus 174 D 174 (301)
T TIGR00511 174 D 174 (301)
T ss_pred h
Confidence 3
No 417
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=21.40 E-value=71 Score=32.63 Aligned_cols=62 Identities=6% Similarity=0.002 Sum_probs=43.2
Q ss_pred HHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecc
Q 006746 233 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 233 ~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaa 309 (632)
...++.|+..+++..-.+.. .........-+..+...-|..-+++ +++.||++|+.|++|.+
T Consensus 11 dyl~~lGv~~I~l~Pi~~~~---------------~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 11 DYLKDLGVNAIWLSPIFESP---------------NGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp HHHHHHTESEEEESS-EESS---------------SSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHcCCCceecccccccc---------------cccccccceeeeccccccchhhhhhhhhhccccccceEEEeee
Confidence 34567899888885421110 0112234445556777889999999 99999999999999986
No 418
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=21.13 E-value=4.8e+02 Score=29.11 Aligned_cols=128 Identities=17% Similarity=0.238 Sum_probs=71.6
Q ss_pred eEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCC--------CCcc
Q 006746 216 NLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSR--------MTGA 287 (632)
Q Consensus 216 ~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn--------~TG~ 287 (632)
++|+.....| ...++-.|+|.|+....+-+- + +.+.++|.+.+.+. ++.++++..+++ ..|.
T Consensus 122 ~vLYVsGEES--~~QiklRA~RL~~~~~~l~l~-a--Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~SapGs 191 (456)
T COG1066 122 KVLYVSGEES--LQQIKLRADRLGLPTNNLYLL-A--ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITSAPGS 191 (456)
T ss_pred cEEEEeCCcC--HHHHHHHHHHhCCCccceEEe-h--hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccCCCCc
Confidence 6776665554 445555678888643333222 1 24788999988864 357777765543 3463
Q ss_pred ----ccchH-HHHHHhhCCcEEEE------eccccCCCCCC-CCCCC-----CCCCcEEEEcccc-ccCCCCCceEEEEE
Q 006746 288 ----RYPYL-WMRIAQENDWHILI------DACALGPKDMD-SFGLS-----LVRPDFLICSFYQ-IFGENPSGFGCLFV 349 (632)
Q Consensus 288 ----~~pl~-i~~~a~~~g~~vlv------Daaq~~g~~m~-~ldls-----~~~~Df~~~S~hK-~~G~~P~G~G~L~V 349 (632)
+.--. ++++||++|+.+++ |++=++|.-+. -+|.. +-+-.|=..-.+| =||. -.-+|+.-+
T Consensus 192 VsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvLEHmVDtVlyFEGd~~~~~RiLR~vKNRFG~-t~EiGvFeM 270 (456)
T COG1066 192 VSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTVLYFEGDRHSRYRILRSVKNRFGA-TNELGVFEM 270 (456)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchheeeeeeEEEEEeccCCCceeeeehhcccCCc-ccceeEEEE
Confidence 33333 78899999987766 55555554211 01110 0122344445567 6773 345677776
Q ss_pred eCCCc
Q 006746 350 KKSTV 354 (632)
Q Consensus 350 r~~~~ 354 (632)
+.+=+
T Consensus 271 ~~~GL 275 (456)
T COG1066 271 TENGL 275 (456)
T ss_pred ecCCe
Confidence 65543
No 419
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=21.09 E-value=5.5e+02 Score=22.28 Aligned_cols=80 Identities=9% Similarity=0.055 Sum_probs=48.3
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.+.|.....-+....++.|.++..+..+ ...+++.+.+... ++.++.++..... ....++ +.++.++
T Consensus 9 ~~~h~lg~~~~~~~l~~~G~~v~~l~~~-----~~~~~~~~~i~~~-----~pdiV~iS~~~~~--~~~~~~~~~~~~~~ 76 (125)
T cd02065 9 GDVHDIGKNIVAIALRDNGFEVIDLGVD-----VPPEEIVEAAKEE-----DADVVGLSALSTT--HMEAMKLVIEALKE 76 (125)
T ss_pred CchhhHHHHHHHHHHHHCCCEEEEcCCC-----CCHHHHHHHHHHc-----CCCEEEEecchHh--HHHHHHHHHHHHHh
Confidence 3555434444566678899999888543 4556777777653 3678888754321 222344 4444455
Q ss_pred C--CcEEEEeccccC
Q 006746 300 N--DWHILIDACALG 312 (632)
Q Consensus 300 ~--g~~vlvDaaq~~ 312 (632)
. ++.+++=+.+..
T Consensus 77 ~p~~~~ivvGG~~~t 91 (125)
T cd02065 77 LGIDIPVVVGGAHPT 91 (125)
T ss_pred cCCCCeEEEeCCcCC
Confidence 5 588888775443
No 420
>smart00642 Aamy Alpha-amylase domain.
Probab=20.95 E-value=77 Score=30.37 Aligned_cols=35 Identities=9% Similarity=0.142 Sum_probs=28.2
Q ss_pred EEEEeccCCCCccccchH-HHHHHhhCCcEEEEecc
Q 006746 275 LFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 275 Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaa 309 (632)
..-+..+...-|..-+++ +++.||++|+.|++|.+
T Consensus 56 ~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 56 ISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 344444555678889999 99999999999999986
No 421
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=20.75 E-value=3.2e+02 Score=29.08 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=49.4
Q ss_pred ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 190 YGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 190 y~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
+.-.++-|-..|+.++-.-..|++||-|+= ..-.|..-...+++|+..|++...+--+ +-++|++++.|..
T Consensus 137 ~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQ-NganS~VG~~ViQlaka~GiktinvVRd----R~~ieel~~~Lk~ 207 (354)
T KOG0025|consen 137 SAATLSVNPCTAYRMLKDFVQLNKGDSVIQ-NGANSGVGQAVIQLAKALGIKTINVVRD----RPNIEELKKQLKS 207 (354)
T ss_pred hhheeccCchHHHHHHHHHHhcCCCCeeee-cCcccHHHHHHHHHHHHhCcceEEEeec----CccHHHHHHHHHH
Confidence 355677899999999999989999996553 2233322345678999999987666444 3456777776653
Done!