Query 006746
Match_columns 632
No_of_seqs 248 out of 1721
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 07:51:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006746.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006746hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qm2_A Phosphoserine aminotran 100.0 1.5E-41 5.1E-46 367.1 20.6 348 108-612 26-384 (386)
2 3e77_A Phosphoserine aminotran 100.0 2.5E-41 8.5E-46 363.9 21.7 353 109-612 13-374 (377)
3 3m5u_A Phosphoserine aminotran 100.0 5.1E-39 1.8E-43 344.2 23.4 347 108-612 4-359 (361)
4 1kmj_A Selenocysteine lyase; p 100.0 2E-35 6.9E-40 316.4 36.0 387 92-611 4-403 (406)
5 3cai_A Possible aminotransfera 100.0 2.5E-35 8.4E-40 317.1 33.2 373 92-609 12-405 (406)
6 1t3i_A Probable cysteine desul 100.0 3.8E-34 1.3E-38 308.2 37.6 390 91-612 8-412 (420)
7 4hvk_A Probable cysteine desul 100.0 1.2E-34 3.9E-39 307.1 31.3 367 109-612 1-372 (382)
8 3e9k_A Kynureninase; kynurenin 100.0 7.8E-35 2.7E-39 320.6 29.5 393 93-612 39-460 (465)
9 4eb5_A Probable cysteine desul 100.0 2.9E-33 9.8E-38 297.5 30.6 367 109-612 1-372 (382)
10 1elu_A L-cysteine/L-cystine C- 100.0 2.5E-32 8.7E-37 291.1 35.4 376 92-609 3-388 (390)
11 3a9z_A Selenocysteine lyase; P 100.0 1.1E-32 3.7E-37 299.5 29.9 385 96-611 8-426 (432)
12 3lvm_A Cysteine desulfurase; s 100.0 2.1E-31 7.1E-36 288.1 39.1 372 107-612 21-398 (423)
13 1qz9_A Kynureninase; kynurenin 100.0 7E-32 2.4E-36 291.1 29.5 394 76-630 5-414 (416)
14 3vax_A Putative uncharacterize 100.0 1.3E-32 4.4E-37 295.0 23.6 368 107-611 19-398 (400)
15 2z9v_A Aspartate aminotransfer 100.0 3.2E-31 1.1E-35 283.4 31.8 363 100-612 2-370 (392)
16 1eg5_A Aminotransferase; PLP-d 100.0 6.3E-31 2.2E-35 279.3 33.8 366 110-612 3-375 (384)
17 2dr1_A PH1308 protein, 386AA l 100.0 1.9E-30 6.6E-35 276.1 34.5 366 95-612 9-378 (386)
18 3zrp_A Serine-pyruvate aminotr 100.0 3.5E-29 1.2E-33 265.9 33.3 356 111-612 4-362 (384)
19 2huf_A Alanine glyoxylate amin 100.0 4.5E-29 1.5E-33 266.8 33.5 371 94-612 6-382 (393)
20 3ffr_A Phosphoserine aminotran 100.0 6.4E-30 2.2E-34 269.4 26.0 354 109-610 4-361 (362)
21 1vjo_A Alanine--glyoxylate ami 100.0 1.8E-29 6.1E-34 270.2 29.4 365 91-611 18-393 (393)
22 2c0r_A PSAT, phosphoserine ami 100.0 1.2E-29 4.1E-34 269.1 27.3 348 107-611 2-359 (362)
23 3ke3_A Putative serine-pyruvat 100.0 1.5E-29 5E-34 271.4 24.9 329 165-612 30-375 (379)
24 3nnk_A Ureidoglycine-glyoxylat 100.0 2.7E-28 9.1E-33 262.1 32.8 370 101-612 6-389 (411)
25 1iug_A Putative aspartate amin 100.0 2.2E-28 7.4E-33 257.0 31.1 340 111-612 3-347 (352)
26 2yrr_A Aminotransferase, class 100.0 2.9E-28 1E-32 255.4 31.3 345 111-611 2-351 (353)
27 2ch1_A 3-hydroxykynurenine tra 100.0 3.2E-28 1.1E-32 260.4 31.9 366 100-612 10-382 (396)
28 2bkw_A Alanine-glyoxylate amin 100.0 1.2E-27 4.1E-32 254.4 31.6 357 108-611 4-382 (385)
29 3isl_A Purine catabolism prote 100.0 1.7E-27 5.7E-32 256.2 32.4 327 169-612 43-389 (416)
30 3f0h_A Aminotransferase; RER07 100.0 7.7E-28 2.6E-32 255.7 29.2 352 109-613 19-374 (376)
31 1m32_A 2-aminoethylphosphonate 100.0 4.3E-27 1.5E-31 247.8 33.8 323 170-611 37-363 (366)
32 2z67_A O-phosphoseryl-tRNA(SEC 100.0 4.1E-29 1.4E-33 275.2 18.3 392 73-610 45-455 (456)
33 3kgw_A Alanine-glyoxylate amin 100.0 4.7E-27 1.6E-31 250.2 31.6 362 108-612 22-387 (393)
34 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 9.9E-27 3.4E-31 246.4 25.6 351 107-611 7-368 (371)
35 1w23_A Phosphoserine aminotran 99.9 6.5E-27 2.2E-31 247.1 21.1 348 109-611 3-358 (360)
36 2jis_A Cysteine sulfinic acid 99.9 3E-25 1E-29 248.0 31.5 372 108-611 108-513 (515)
37 1wyu_A Glycine dehydrogenase ( 99.9 3.4E-26 1.2E-30 250.1 22.5 319 169-610 107-437 (438)
38 2fyf_A PSAT, phosphoserine ami 99.9 3.2E-25 1.1E-29 238.7 27.6 351 107-611 38-396 (398)
39 3f9t_A TDC, L-tyrosine decarbo 99.9 3.8E-24 1.3E-28 227.5 35.5 334 109-611 32-396 (397)
40 2dgk_A GAD-beta, GADB, glutama 99.9 1.8E-24 6.2E-29 237.4 32.0 324 168-612 79-433 (452)
41 2qma_A Diaminobutyrate-pyruvat 99.9 1.6E-24 5.4E-29 240.9 31.5 385 85-612 74-495 (497)
42 3hbx_A GAD 1, glutamate decarb 99.9 1.5E-23 5.2E-28 233.7 36.8 352 109-611 57-442 (502)
43 2cb1_A O-acetyl homoserine sul 99.9 7.2E-24 2.5E-28 229.9 31.6 327 168-608 54-411 (412)
44 2okj_A Glutamate decarboxylase 99.9 1.1E-23 3.8E-28 234.5 33.8 365 108-612 92-501 (504)
45 1rv3_A Serine hydroxymethyltra 99.9 1.8E-25 6E-30 248.2 19.1 362 109-612 46-430 (483)
46 3ffh_A Histidinol-phosphate am 99.9 7.6E-23 2.6E-27 216.6 32.5 340 84-610 13-363 (363)
47 1svv_A Threonine aldolase; str 99.9 8.5E-24 2.9E-28 222.2 22.5 331 107-612 13-357 (359)
48 1qgn_A Protein (cystathionine 99.9 5.2E-23 1.8E-27 226.1 28.5 173 164-357 108-284 (445)
49 1pff_A Methionine gamma-lyase; 99.9 2.1E-24 7E-29 226.0 15.7 311 174-609 2-330 (331)
50 2fnu_A Aminotransferase; prote 99.9 7.6E-23 2.6E-27 216.8 26.6 352 117-612 8-371 (375)
51 1gc0_A Methionine gamma-lyase; 99.9 2.8E-23 9.4E-28 224.2 23.5 200 109-354 28-231 (398)
52 3frk_A QDTB; aminotransferase, 99.9 1.4E-23 4.9E-28 223.4 20.7 320 170-612 36-367 (373)
53 3ly1_A Putative histidinol-pho 99.9 5.7E-22 1.9E-26 208.9 31.6 326 107-613 16-352 (354)
54 2w8t_A SPT, serine palmitoyltr 99.9 1.1E-21 3.9E-26 213.3 33.8 339 108-612 63-414 (427)
55 1fc4_A 2-amino-3-ketobutyrate 99.9 2.7E-22 9.3E-27 215.2 28.0 340 107-612 43-396 (401)
56 3mc6_A Sphingosine-1-phosphate 99.9 7.9E-23 2.7E-27 226.7 24.6 311 169-612 106-436 (497)
57 1v2d_A Glutamine aminotransfer 99.9 1.1E-22 3.8E-27 217.0 24.4 294 173-612 64-370 (381)
58 2vi8_A Serine hydroxymethyltra 99.9 8.3E-23 2.8E-27 219.0 23.1 351 109-612 24-386 (405)
59 3vp6_A Glutamate decarboxylase 99.9 1.8E-21 6E-26 217.6 34.3 329 169-610 134-502 (511)
60 3get_A Histidinol-phosphate am 99.9 3.3E-22 1.1E-26 211.8 26.9 339 84-610 11-364 (365)
61 2fq6_A Cystathionine beta-lyas 99.9 3.1E-23 1.1E-27 226.0 19.2 171 164-357 76-253 (415)
62 3mad_A Sphingosine-1-phosphate 99.9 4.3E-22 1.5E-26 222.1 27.7 309 169-612 138-468 (514)
63 2rfv_A Methionine gamma-lyase; 99.9 5.1E-23 1.7E-27 221.8 19.4 202 108-355 26-231 (398)
64 3k40_A Aromatic-L-amino-acid d 99.9 4.5E-22 1.5E-26 220.4 27.1 324 168-612 111-470 (475)
65 1cs1_A CGS, protein (cystathio 99.9 1.2E-21 4E-26 210.2 29.4 172 164-357 46-222 (386)
66 1n8p_A Cystathionine gamma-lya 99.9 7.6E-24 2.6E-28 228.8 12.3 168 163-355 48-225 (393)
67 3euc_A Histidinol-phosphate am 99.9 1.1E-21 3.8E-26 207.9 28.8 287 172-611 69-366 (367)
68 3tqx_A 2-amino-3-ketobutyrate 99.9 5.8E-22 2E-26 211.8 26.5 342 108-612 42-395 (399)
69 3dzz_A Putative pyridoxal 5'-p 99.9 1.4E-21 4.6E-26 208.3 29.3 307 169-612 65-388 (391)
70 3a2b_A Serine palmitoyltransfe 99.9 1.1E-21 3.9E-26 210.4 27.8 298 169-612 87-391 (398)
71 2bwn_A 5-aminolevulinate synth 99.9 1.6E-22 5.5E-27 217.2 21.2 360 84-611 17-398 (401)
72 1js3_A DDC;, DOPA decarboxylas 99.9 2E-21 6.9E-26 215.0 30.3 324 168-612 111-473 (486)
73 1mdo_A ARNB aminotransferase; 99.9 8E-22 2.7E-26 210.7 25.9 337 170-612 39-385 (393)
74 3p1t_A Putative histidinol-pho 99.9 4.5E-21 1.6E-25 200.3 30.6 315 107-611 16-335 (337)
75 1bs0_A Protein (8-amino-7-oxon 99.9 1.1E-21 3.6E-26 209.4 25.8 338 107-609 37-383 (384)
76 4dq6_A Putative pyridoxal phos 99.9 3E-21 1E-25 205.7 28.0 347 93-611 22-391 (391)
77 3uwc_A Nucleotide-sugar aminot 99.9 9.3E-22 3.2E-26 208.8 23.7 319 170-612 38-370 (374)
78 4e1o_A HDC, histidine decarbox 99.9 2.8E-21 9.7E-26 214.2 27.7 325 168-612 116-477 (481)
79 3g0t_A Putative aminotransfera 99.9 2.4E-21 8.3E-26 210.2 24.8 317 173-611 85-435 (437)
80 3dr4_A Putative perosamine syn 99.9 2.1E-21 7.3E-26 207.9 23.9 324 170-610 56-390 (391)
81 1o69_A Aminotransferase; struc 99.9 3.4E-21 1.2E-25 207.3 25.5 331 170-613 32-387 (394)
82 1u08_A Hypothetical aminotrans 99.9 3.7E-21 1.3E-25 205.5 25.1 297 174-609 71-386 (386)
83 1gd9_A Aspartate aminotransfer 99.9 3E-21 1E-25 206.2 24.2 299 173-612 66-385 (389)
84 2ctz_A O-acetyl-L-homoserine s 99.9 1.2E-20 4E-25 205.6 29.1 165 164-350 52-221 (421)
85 3b8x_A WBDK, pyridoxamine 5-ph 99.9 7.4E-21 2.5E-25 203.8 26.8 335 170-606 34-389 (390)
86 1v72_A Aldolase; PLP-dependent 99.9 7.2E-21 2.5E-25 199.8 26.0 331 107-612 7-352 (356)
87 3cog_A Cystathionine gamma-lya 99.9 1.3E-21 4.5E-26 212.0 20.7 165 170-357 67-237 (403)
88 3kax_A Aminotransferase, class 99.9 7.3E-21 2.5E-25 202.1 26.0 304 169-610 62-382 (383)
89 3fdb_A Beta C-S lyase, putativ 99.9 5.1E-21 1.7E-25 203.1 24.0 294 174-612 62-375 (377)
90 2c81_A Glutamine-2-deoxy-scyll 99.9 9.1E-21 3.1E-25 205.2 26.1 348 170-612 42-413 (418)
91 2o0r_A RV0858C (N-succinyldiam 99.9 3.4E-21 1.2E-25 207.9 22.7 317 174-621 66-403 (411)
92 1b9h_A AHBA synthase, protein 99.9 8.9E-21 3.1E-25 202.7 25.4 334 170-611 38-386 (388)
93 3dyd_A Tyrosine aminotransfera 99.9 5E-21 1.7E-25 208.3 23.7 303 173-612 99-423 (427)
94 2z61_A Probable aspartate amin 99.9 3.8E-21 1.3E-25 204.3 21.6 325 107-611 29-369 (370)
95 1yiz_A Kynurenine aminotransfe 99.9 1.8E-20 6.3E-25 203.1 27.0 306 174-612 81-428 (429)
96 3qhx_A Cystathionine gamma-syn 99.9 1.4E-20 4.7E-25 203.1 25.8 168 161-351 57-229 (392)
97 2vyc_A Biodegradative arginine 99.9 5.3E-21 1.8E-25 222.8 23.9 320 170-611 205-603 (755)
98 3ftb_A Histidinol-phosphate am 99.9 4.8E-20 1.6E-24 194.4 28.6 285 173-611 64-359 (361)
99 1j32_A Aspartate aminotransfer 99.9 1.5E-20 5.2E-25 200.7 25.0 295 174-612 71-386 (388)
100 1wyu_B Glycine dehydrogenase s 99.9 2.2E-20 7.4E-25 206.5 26.9 314 169-612 106-440 (474)
101 3acz_A Methionine gamma-lyase; 99.9 3.5E-20 1.2E-24 199.5 27.7 168 169-358 58-230 (389)
102 1vef_A Acetylornithine/acetyl- 99.9 9.9E-21 3.4E-25 202.8 23.3 324 107-610 43-394 (395)
103 2dkj_A Serine hydroxymethyltra 99.9 5.4E-21 1.8E-25 205.0 21.2 349 111-612 26-387 (407)
104 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2E-21 6.8E-26 213.4 18.0 285 170-612 57-352 (446)
105 2oga_A Transaminase; PLP-depen 99.9 1.7E-20 5.7E-25 202.0 24.8 323 170-612 63-395 (399)
106 3hdo_A Histidinol-phosphate am 99.9 1.5E-20 5.3E-25 199.0 23.8 282 173-612 68-354 (360)
107 1o4s_A Aspartate aminotransfer 99.9 9.2E-21 3.1E-25 203.2 22.2 289 173-611 81-387 (389)
108 3kki_A CAI-1 autoinducer synth 99.9 1.2E-19 4E-24 195.7 30.6 294 171-622 105-408 (409)
109 1lc5_A COBD, L-threonine-O-3-p 99.9 1.5E-20 5.3E-25 199.3 22.9 285 173-611 62-358 (364)
110 1xi9_A Putative transaminase; 99.9 1.5E-20 5.1E-25 202.5 23.1 296 173-612 81-402 (406)
111 2a7v_A Serine hydroxymethyltra 99.9 2.6E-20 9E-25 206.7 25.3 364 115-612 61-440 (490)
112 1bw0_A TAT, protein (tyrosine 99.9 4.2E-20 1.4E-24 199.3 26.3 302 173-612 78-412 (416)
113 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2.5E-20 8.5E-25 203.4 24.7 351 170-614 62-437 (437)
114 1e5e_A MGL, methionine gamma-l 99.9 9.7E-20 3.3E-24 197.2 28.6 169 169-359 61-235 (404)
115 3cq5_A Histidinol-phosphate am 99.9 1.7E-19 5.7E-24 191.8 30.0 283 173-612 72-367 (369)
116 1fg7_A Histidinol phosphate am 99.9 4E-20 1.4E-24 196.2 24.9 283 173-609 61-354 (356)
117 3nra_A Aspartate aminotransfer 99.9 2E-20 7E-25 200.5 22.2 305 169-612 81-404 (407)
118 2zyj_A Alpha-aminodipate amino 99.9 1.2E-20 4.1E-25 202.5 20.0 301 173-612 77-392 (397)
119 1c4k_A Protein (ornithine deca 99.9 1.7E-20 5.7E-25 217.2 22.3 318 170-611 173-564 (730)
120 1d2f_A MALY protein; aminotran 99.9 3E-19 1E-23 190.9 30.4 295 175-611 69-387 (390)
121 2eh6_A Acoat, acetylornithine 99.8 5.7E-20 1.9E-24 195.1 23.0 320 107-610 26-375 (375)
122 3h14_A Aminotransferase, class 99.8 7.5E-20 2.6E-24 195.7 24.1 296 173-612 71-381 (391)
123 1c7n_A Cystalysin; transferase 99.8 2.1E-19 7.4E-24 192.5 27.7 298 173-612 69-392 (399)
124 3l8a_A METC, putative aminotra 99.8 9.4E-20 3.2E-24 197.6 25.0 305 169-611 99-420 (421)
125 3ele_A Amino transferase; RER0 99.8 1.4E-19 4.8E-24 193.9 25.9 296 174-612 80-395 (398)
126 1ibj_A CBL, cystathionine beta 99.8 9.4E-21 3.2E-25 209.2 17.1 165 170-357 133-302 (464)
127 2zc0_A Alanine glyoxylate tran 99.8 8.1E-20 2.8E-24 196.3 23.7 303 173-612 78-403 (407)
128 3n0l_A Serine hydroxymethyltra 99.8 8.1E-20 2.8E-24 196.5 22.6 346 115-612 32-388 (417)
129 2gb3_A Aspartate aminotransfer 99.8 9.3E-20 3.2E-24 196.7 23.1 297 173-612 82-401 (409)
130 2x5d_A Probable aminotransfera 99.8 6.3E-20 2.2E-24 198.0 21.7 297 173-612 78-397 (412)
131 2po3_A 4-dehydrase; external a 99.8 2.9E-19 9.8E-24 193.9 26.9 327 170-612 52-385 (424)
132 3nyt_A Aminotransferase WBPE; 99.8 5.6E-20 1.9E-24 195.5 20.8 317 170-609 35-360 (367)
133 2o1b_A Aminotransferase, class 99.8 7.1E-20 2.4E-24 197.6 21.5 297 173-612 88-402 (404)
134 2dou_A Probable N-succinyldiam 99.8 1.1E-19 3.8E-24 193.4 21.7 296 171-611 64-376 (376)
135 3gbx_A Serine hydroxymethyltra 99.8 1.1E-19 3.8E-24 195.3 21.1 346 114-612 36-395 (420)
136 3ruy_A Ornithine aminotransfer 99.8 9.1E-19 3.1E-23 187.3 27.5 323 107-610 34-391 (392)
137 3fvs_A Kynurenine--oxoglutarat 99.8 8.2E-20 2.8E-24 197.2 19.4 304 174-611 71-420 (422)
138 1b5p_A Protein (aspartate amin 99.8 3.1E-19 1.1E-23 191.0 23.3 294 174-611 72-383 (385)
139 1vp4_A Aminotransferase, putat 99.8 1.6E-19 5.6E-24 195.9 21.4 310 173-612 88-417 (425)
140 3op7_A Aminotransferase class 99.8 6.6E-19 2.3E-23 187.1 25.5 293 173-612 66-370 (375)
141 3ecd_A Serine hydroxymethyltra 99.8 2.3E-19 7.7E-24 193.3 22.0 351 113-613 37-397 (425)
142 1jg8_A L-ALLO-threonine aldola 99.8 1.9E-19 6.5E-24 189.0 20.5 209 108-355 4-221 (347)
143 1iay_A ACC synthase 2, 1-amino 99.8 1.7E-19 5.9E-24 195.6 20.7 306 173-612 86-426 (428)
144 2x5f_A Aspartate_tyrosine_phen 99.8 7.3E-19 2.5E-23 190.8 24.7 299 173-612 91-428 (430)
145 1s0a_A Adenosylmethionine-8-am 99.8 1.2E-18 4.3E-23 189.0 26.4 345 107-612 41-423 (429)
146 3aow_A Putative uncharacterize 99.8 1.2E-18 4E-23 191.2 25.8 302 173-613 121-445 (448)
147 3ju7_A Putative PLP-dependent 99.8 3.5E-19 1.2E-23 191.3 21.0 325 170-612 36-374 (377)
148 3e2y_A Kynurenine-oxoglutarate 99.8 2.2E-19 7.4E-24 192.9 18.4 342 107-609 23-409 (410)
149 3piu_A 1-aminocyclopropane-1-c 99.8 8.9E-19 3E-23 190.5 22.0 304 173-612 89-431 (435)
150 2ord_A Acoat, acetylornithine 99.8 2E-18 7E-23 185.1 24.1 325 107-611 38-395 (397)
151 1uu1_A Histidinol-phosphate am 99.8 1.3E-18 4.4E-23 182.5 21.7 306 108-609 20-334 (335)
152 3fkd_A L-threonine-O-3-phospha 99.8 5.1E-18 1.7E-22 178.7 26.1 280 173-613 53-342 (350)
153 3if2_A Aminotransferase; YP_26 99.8 4.2E-19 1.4E-23 193.3 18.2 315 172-613 85-440 (444)
154 3ezs_A Aminotransferase ASPB; 99.8 2E-18 6.8E-23 183.2 22.6 291 174-612 63-374 (376)
155 2ez2_A Beta-tyrosinase, tyrosi 99.8 2.6E-17 9E-22 179.8 31.1 351 107-612 40-430 (456)
156 3asa_A LL-diaminopimelate amin 99.8 1.7E-18 5.8E-23 186.2 21.3 340 107-612 33-392 (400)
157 3jtx_A Aminotransferase; NP_28 99.8 1.1E-17 3.6E-22 178.9 27.2 302 171-610 71-395 (396)
158 3qgu_A LL-diaminopimelate amin 99.8 4.9E-18 1.7E-22 185.3 24.8 297 173-612 114-439 (449)
159 3b46_A Aminotransferase BNA3; 99.8 1.7E-18 5.8E-23 189.5 21.1 303 174-609 99-443 (447)
160 1sff_A 4-aminobutyrate aminotr 99.8 1.2E-17 4E-22 180.5 26.4 342 107-611 39-422 (426)
161 3ndn_A O-succinylhomoserine su 99.8 1.7E-17 5.7E-22 180.6 27.7 168 164-354 75-247 (414)
162 3h7f_A Serine hydroxymethyltra 99.8 4.4E-18 1.5E-22 186.5 22.9 353 114-612 51-413 (447)
163 2r2n_A Kynurenine/alpha-aminoa 99.8 3.1E-17 1.1E-21 178.0 29.0 313 170-613 82-424 (425)
164 3ez1_A Aminotransferase MOCR f 99.8 1.5E-17 5E-22 179.9 25.0 300 173-612 73-414 (423)
165 3g7q_A Valine-pyruvate aminotr 99.8 9.2E-18 3.1E-22 180.6 20.8 307 172-612 77-412 (417)
166 3ppl_A Aspartate aminotransfer 99.8 2E-17 6.9E-22 179.4 23.3 307 173-613 81-420 (427)
167 3a8u_X Omega-amino acid--pyruv 99.8 3.6E-17 1.2E-21 178.7 23.8 353 107-612 48-446 (449)
168 3tcm_A Alanine aminotransferas 99.8 5.8E-17 2E-21 180.4 25.1 315 174-612 138-493 (500)
169 2eo5_A 419AA long hypothetical 99.8 3.6E-16 1.2E-20 169.5 30.2 334 107-612 40-417 (419)
170 3ri6_A O-acetylhomoserine sulf 99.8 4.1E-17 1.4E-21 178.5 22.5 166 164-350 76-243 (430)
171 1ax4_A Tryptophanase; tryptoph 99.8 1.3E-17 4.3E-22 182.8 18.5 171 171-356 77-287 (467)
172 1yaa_A Aspartate aminotransfer 99.8 3.5E-18 1.2E-22 184.1 13.8 204 107-348 35-267 (412)
173 3nx3_A Acoat, acetylornithine 99.8 2.8E-16 9.5E-21 168.3 28.2 330 107-611 34-393 (395)
174 2pb2_A Acetylornithine/succiny 99.7 9.2E-17 3.1E-21 174.4 24.3 333 107-612 55-417 (420)
175 3d6k_A Putative aminotransfera 99.7 2.9E-16 9.8E-21 170.3 27.8 169 173-357 79-279 (422)
176 2oat_A Ornithine aminotransfer 99.7 4E-16 1.4E-20 170.7 29.0 330 107-611 74-437 (439)
177 2oqx_A Tryptophanase; lyase, p 99.7 1.5E-17 5.1E-22 182.2 17.5 167 171-352 75-281 (467)
178 1z7d_A Ornithine aminotransfer 99.7 6.3E-16 2.1E-20 168.7 30.2 330 107-612 63-428 (433)
179 3ei9_A LL-diaminopimelate amin 99.7 9.5E-17 3.3E-21 174.2 21.6 297 173-609 101-424 (432)
180 2cjg_A L-lysine-epsilon aminot 99.7 1.1E-16 3.8E-21 175.5 21.8 304 170-612 101-447 (449)
181 7aat_A Aspartate aminotransfer 99.7 8.5E-17 2.9E-21 172.5 19.4 206 107-350 34-265 (401)
182 3meb_A Aspartate aminotransfer 99.7 5.3E-17 1.8E-21 177.9 18.0 202 107-347 55-289 (448)
183 4adb_A Succinylornithine trans 99.7 1.4E-16 4.8E-21 170.8 20.3 331 107-612 37-399 (406)
184 2aeu_A Hypothetical protein MJ 99.7 3.7E-17 1.3E-21 175.0 15.0 191 109-358 29-229 (374)
185 3rq1_A Aminotransferase class 99.7 1E-15 3.5E-20 165.1 25.5 216 107-357 44-287 (418)
186 1ajs_A Aspartate aminotransfer 99.7 7.1E-17 2.4E-21 173.7 15.9 335 107-612 36-410 (412)
187 2ay1_A Aroat, aromatic amino a 99.7 4.7E-17 1.6E-21 173.9 13.6 165 173-349 72-257 (394)
188 3bwn_A AT1G70560, L-tryptophan 99.7 6.6E-17 2.3E-21 174.0 14.2 285 173-612 71-386 (391)
189 3nmy_A Xometc, cystathionine g 99.7 1.8E-15 6.3E-20 163.7 25.4 165 163-349 60-228 (400)
190 3n75_A LDC, lysine decarboxyla 99.7 1.5E-15 5.1E-20 174.8 25.6 312 169-611 194-558 (715)
191 2q7w_A Aspartate aminotransfer 99.7 3.8E-17 1.3E-21 174.6 11.4 205 107-349 32-260 (396)
192 3fsl_A Aromatic-amino-acid ami 99.7 1.2E-15 4.3E-20 162.8 22.8 208 107-350 32-262 (397)
193 3jzl_A Putative cystathionine 99.7 9.1E-16 3.1E-20 166.7 21.3 214 99-358 18-251 (409)
194 3t18_A Aminotransferase class 99.7 5E-15 1.7E-19 159.5 26.5 214 107-357 43-286 (413)
195 4f4e_A Aromatic-amino-acid ami 99.7 1.7E-15 6E-20 163.9 21.5 207 107-349 55-283 (420)
196 1zod_A DGD, 2,2-dialkylglycine 99.7 1.1E-15 3.9E-20 165.7 19.6 351 107-611 41-430 (433)
197 3ihj_A Alanine aminotransferas 99.7 8.8E-15 3E-19 162.8 24.7 316 174-612 133-492 (498)
198 3hvy_A Cystathionine beta-lyas 99.6 1.1E-14 3.7E-19 159.0 23.6 220 94-359 29-269 (427)
199 3f6t_A Aspartate aminotransfer 99.6 6.3E-15 2.2E-19 165.3 22.3 165 174-352 142-330 (533)
200 3i16_A Aluminum resistance pro 99.6 1.1E-14 3.9E-19 158.8 23.5 173 172-359 75-269 (427)
201 3n5m_A Adenosylmethionine-8-am 99.6 7.1E-14 2.4E-18 152.8 29.8 356 107-611 47-450 (452)
202 3pj0_A LMO0305 protein; struct 99.6 2.5E-15 8.5E-20 158.3 16.8 170 170-357 48-228 (359)
203 3i4j_A Aminotransferase, class 99.6 1.9E-14 6.5E-19 156.1 24.2 358 107-612 27-427 (430)
204 3gju_A Putative aminotransfera 99.6 6.9E-14 2.4E-18 153.5 28.5 222 107-358 49-313 (460)
205 1ohv_A 4-aminobutyrate aminotr 99.6 6.1E-14 2.1E-18 154.9 28.0 340 107-611 61-469 (472)
206 3dxv_A Alpha-amino-epsilon-cap 99.6 4.1E-14 1.4E-18 153.8 26.0 345 107-612 41-424 (439)
207 4a6r_A Omega transaminase; tra 99.6 3.8E-14 1.3E-18 155.5 25.9 222 107-358 48-311 (459)
208 3lws_A Aromatic amino acid bet 99.6 6.4E-15 2.2E-19 155.2 18.6 167 170-357 47-226 (357)
209 3tfu_A Adenosylmethionine-8-am 99.6 3.3E-14 1.1E-18 156.4 22.1 346 107-612 71-452 (457)
210 2hox_A ALLIIN lyase 1; cystein 99.6 5.9E-15 2E-19 160.9 15.4 155 173-357 103-274 (427)
211 3b1d_A Betac-S lyase; HET: PLP 99.4 7.9E-17 2.7E-21 172.5 0.0 173 173-358 69-262 (392)
212 3ht4_A Aluminum resistance pro 99.6 2.8E-14 9.4E-19 156.0 19.9 176 171-359 66-258 (431)
213 3hmu_A Aminotransferase, class 99.6 2E-13 6.9E-18 150.8 26.6 348 107-612 53-451 (472)
214 3dod_A Adenosylmethionine-8-am 99.6 7.6E-13 2.6E-17 144.6 30.3 220 107-359 42-304 (448)
215 3i5t_A Aminotransferase; pyrid 99.6 3E-13 1E-17 149.5 26.3 352 107-612 52-453 (476)
216 3l44_A Glutamate-1-semialdehyd 99.6 1.6E-13 5.4E-18 149.0 23.1 206 107-359 53-293 (434)
217 4ffc_A 4-aminobutyrate aminotr 99.6 2.6E-13 8.8E-18 148.9 23.8 347 107-612 62-448 (453)
218 3fq8_A Glutamate-1-semialdehyd 99.5 9.3E-14 3.2E-18 150.5 18.5 210 107-359 50-290 (427)
219 3oks_A 4-aminobutyrate transam 99.5 1.3E-12 4.3E-17 143.2 27.3 350 107-611 59-449 (451)
220 4eu1_A Mitochondrial aspartate 99.5 3.6E-13 1.2E-17 144.9 22.1 166 173-351 82-276 (409)
221 4e77_A Glutamate-1-semialdehyd 99.5 1.2E-12 4E-17 142.0 25.7 208 107-359 51-291 (429)
222 2epj_A Glutamate-1-semialdehyd 99.5 4.6E-13 1.6E-17 145.4 21.7 210 107-359 54-294 (434)
223 2cy8_A D-phgat, D-phenylglycin 99.5 1.2E-12 4.1E-17 143.0 23.2 210 107-359 55-292 (453)
224 3k28_A Glutamate-1-semialdehyd 99.5 6.2E-13 2.1E-17 144.3 20.6 207 107-359 51-291 (429)
225 3bc8_A O-phosphoseryl-tRNA(SEC 99.4 2.8E-12 9.6E-17 139.9 20.1 175 169-351 97-281 (450)
226 2e7u_A Glutamate-1-semialdehyd 99.4 4.4E-12 1.5E-16 137.3 19.5 209 107-359 50-289 (424)
227 2zy4_A L-aspartate beta-decarb 99.4 8.3E-12 2.8E-16 140.4 18.6 156 190-357 166-338 (546)
228 3ou5_A Serine hydroxymethyltra 99.3 1.8E-10 6E-15 124.4 25.3 357 115-611 61-439 (490)
229 2yky_A Beta-transaminase; tran 98.7 6E-12 2E-16 138.7 0.0 173 170-359 140-323 (465)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.1 5E-09 1.7E-13 113.6 20.0 255 68-352 23-300 (501)
231 4ao9_A Beta-phenylalanine amin 99.0 4.5E-09 1.5E-13 115.3 18.3 170 173-359 130-310 (454)
232 4atq_A 4-aminobutyrate transam 99.0 3.4E-08 1.1E-12 108.5 23.3 312 173-612 110-454 (456)
233 3k7y_A Aspartate aminotransfer 99.0 3.5E-08 1.2E-12 106.7 21.1 166 174-349 76-263 (405)
234 4e3q_A Pyruvate transaminase; 98.8 6.9E-07 2.4E-11 98.5 25.6 313 173-614 114-469 (473)
235 4h51_A Aspartate aminotransfer 98.7 1.8E-06 6.2E-11 93.7 22.5 227 95-355 38-285 (420)
236 4a0g_A Adenosylmethionine-8-am 98.0 4.6E-05 1.6E-09 89.5 14.9 101 257-359 577-688 (831)
237 2pq4_B Periplasmic nitrate red 54.2 2.2 7.4E-05 29.2 -0.5 12 45-56 3-14 (35)
238 2yxb_A Coenzyme B12-dependent 35.8 1.2E+02 0.004 27.5 8.1 76 221-308 28-107 (161)
239 1ccw_A Protein (glutamate muta 30.8 1.1E+02 0.0039 26.7 7.0 81 221-313 13-97 (137)
240 1y80_A Predicted cobalamin bin 27.4 2.7E+02 0.0092 25.9 9.5 77 222-310 99-180 (210)
241 4gqr_A Pancreatic alpha-amylas 22.4 41 0.0014 35.6 2.8 29 281-309 69-98 (496)
242 3ezx_A MMCP 1, monomethylamine 22.0 4.5E+02 0.015 24.7 10.0 80 221-310 102-186 (215)
243 3qr3_A Endoglucanase EG-II; TI 21.7 1.2E+02 0.0041 31.0 6.1 62 228-311 45-107 (340)
244 4hfl_A Putative cytoplasmic pr 21.6 1E+02 0.0035 28.7 4.9 42 468-518 93-136 (176)
No 1
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=100.00 E-value=1.5e-41 Score=367.06 Aligned_cols=348 Identities=10% Similarity=0.073 Sum_probs=253.8
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccccc---ccccchhHHHHHHHHHHHHHcC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL---LHGGQESGLESAMKKRIMDFLN 184 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~---~~g~~~~~~~~~~R~~ia~~l~ 184 (632)
.++|||++|.+++|+.|++++..++... .+|+++.+ ..+....++++++|++|+++||
T Consensus 26 ~~~yl~~agpt~~p~~V~~a~~~~~~~~-------------------~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~ 86 (386)
T 3qm2_A 26 AQVFNFSSGPAMLPAEVLKLAQQELCDW-------------------HGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN 86 (386)
T ss_dssp -CCEECCSSSCCCCHHHHHHHTCC------------------------------------------CCHHHHHHHHHHHT
T ss_pred ccCccccCCCCCCCHHHHHHHHHHHHhc-------------------cccCccccccCCCCHHHHHHHHHHHHHHHHHhC
Confidence 3689999999999999999998765421 14444421 1233446889999999999999
Q ss_pred CCCCCccEEE-eCCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEecc-CCccc-cCHHHHH
Q 006746 185 ISENDYGMVF-TANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFS-WPRLR-INSEKLR 260 (632)
Q Consensus 185 a~~~ey~vvf-t~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~-~~~~~-i~~~~l~ 260 (632)
++ ++++|+| |+|+|+++++++.++ +++||+++ +..++++ .+|+ ..+++.| +|.+++++ .+.+. +++++++
T Consensus 87 ~~-~~~evif~t~~~T~a~n~ai~~l-~~~gd~v~~~~~~~~~--~~~~-~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~ 160 (386)
T 3qm2_A 87 IP-SNYKVLFCHGGGRGQFAGVPLNL-LGDKTTADYVDAGYWA--ASAI-KEAKKYC-APQIIDAKITVDGKRAVKPMRE 160 (386)
T ss_dssp CC-TTEEEEEEESCTTHHHHHHHHHH-CTTCCEEEEEESSHHH--HHHH-HHHTTTS-EEEEEECEEEETTEEEECCGGG
T ss_pred CC-CCceEEEEcCCchHHHHHHHHhc-cCCCCeEEEEeCCHHH--HHHH-HHHHHhC-CeEEEecCcccCCCCCCchHHH
Confidence 95 4468999 699999999999998 68899964 5566765 3664 5578889 99999986 12333 5666666
Q ss_pred HHHHhcCcCCCceeEEEEeccCCCCccc-cchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccC
Q 006746 261 KMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFG 338 (632)
Q Consensus 261 ~~i~~~~~~~~~~~Lv~~~~~sn~TG~~-~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G 338 (632)
.+|+++ ++||+++|++|.||++ .|++ |. +|++++|||+|++|+ .++|+++++ ++++|+||++|
T Consensus 161 ~~l~~~------t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~--~pidv~~~~--~~~~s~hK~lG 225 (386)
T 3qm2_A 161 WQLSDN------AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILS--APLDVSRYG--VIYAGAQKNIG 225 (386)
T ss_dssp CCCCTT------CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTS--SCCCGGGCS--EEEEETTTTTC
T ss_pred hhcCCC------CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCC--CCCCccccC--EEEEecccccC
Confidence 655543 5899999999999997 8998 75 799999999999998 699999875 67799999999
Q ss_pred CCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCC
Q 006746 339 ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGK 418 (632)
Q Consensus 339 ~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt 418 (632)
|.|+|+||+|+++++.+++.... .. + |. ... +.+ .+.||
T Consensus 226 --P~G~g~l~v~~~~~~~~~~~~p~-~~-------~-~~----------------~~~--~~~------------~~~gT 264 (386)
T 3qm2_A 226 --PAGLTLVIVREDLLGKAHESCPS-IL-------D-YT----------------VLN--DND------------SMFNT 264 (386)
T ss_dssp --CTTEEEEEEEGGGCSCCCTTSCG-GG-------C-HH----------------HHH--HC------------------
T ss_pred --CCccEEEEECHHHHhhhcccCCc-HH-------H-HH----------------HHh--hcC------------CCCCC
Confidence 99999999999998877653210 00 0 10 000 111 14678
Q ss_pred cccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEE
Q 006746 419 LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKI 497 (632)
Q Consensus 419 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~I 497 (632)
+|++.|++|. +||+++.++ |+++|.+|.+.|+++|+++|.++ | .+..
T Consensus 265 p~v~~i~~l~------------------------~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~------~--~~~~ 312 (386)
T 3qm2_A 265 PPTFAWYLSG------------------------LVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS------D--FYRN 312 (386)
T ss_dssp -CCSHHHHHH------------------------HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC------S--SEEC
T ss_pred CcHHHHHHHH------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC------C--Cccc
Confidence 9999999998 999999999 89999999999999999999987 3 2332
Q ss_pred ECCCCCCCCC-cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccc
Q 006746 498 YGPKIRFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRK 576 (632)
Q Consensus 498 ygp~~~~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 576 (632)
+++ +..|+ ++++|++++. .++...+++ ++++||.++.|..|
T Consensus 313 ~~~--~~~rs~~iv~f~~~~~---~~~~~~~~~-L~~~gI~~~~g~~~-------------------------------- 354 (386)
T 3qm2_A 313 DVA--QANRSRMNVPFQLADN---TLDKVFLEE-SFAAGLHALKGHRV-------------------------------- 354 (386)
T ss_dssp CBC--GGGBCSSEEEEEESSG---GGHHHHHHH-HHHTTEECCBCCTT--------------------------------
T ss_pred CCC--HHHcCceEEEEECCCc---cccHHHHHH-HHHCCCEEeCCCCC--------------------------------
Confidence 222 23454 6999999852 255444544 67789998876322
Q ss_pred ccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 577 DKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 577 ~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.||+|++.+||.|||++|+++|++|...
T Consensus 355 ------~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 355 ------VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp ------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ------cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 245999999999999999999999998754
No 2
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=363.86 Aligned_cols=353 Identities=12% Similarity=0.101 Sum_probs=266.4
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccccc---ccccchhHHHHHHHHHHHHHcCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL---LHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~---~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
.--||.+++++.|+.|++++..++... .+|+.+.+ ..+....++++++|++++++||+
T Consensus 13 ~~~~n~at~~~~p~~Vl~a~~~~~~~~-------------------~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~ 73 (377)
T 3e77_A 13 LGTENLYFQSMLPHSVLLEIQKELLDY-------------------KGVGISVLEMSHRSSDFAKIINNTENLVRELLAV 73 (377)
T ss_dssp --CCCEECSCCCCHHHHHHHHHTSSSG-------------------GGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccccccCCCCHHHHHHHHHHHHhc-------------------ccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 346999999999999999998866421 14544431 12344578999999999999999
Q ss_pred CCCCccEEE-eCCHHHHHHHHHhhCCC-CCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHH
Q 006746 186 SENDYGMVF-TANRTSAFKLLAESYPF-MSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKM 262 (632)
Q Consensus 186 ~~~ey~vvf-t~naT~al~lv~~sl~~-~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~ 262 (632)
++ +++|+| |+|+|+++++++.++.. ++||+++ +..++++ ..| .+.+++.|+.++.+++++.. .+++++++..
T Consensus 74 ~~-~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~--~~~-~~~a~~~G~~~~~~~~~~~~-~~~~~~~~~~ 148 (377)
T 3e77_A 74 PD-NYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWS--AKA-AEEAKKFGTINIVHPKLGSY-TKIPDPSTWN 148 (377)
T ss_dssp CT-TEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHH--HHH-HHHHTTTSEEEECSCCCSSS-CSCCCGGGCC
T ss_pred CC-CCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHH--HHH-HHHHHHhCCceEEeccCCCc-CCCCChHHhc
Confidence 63 468999 58999999999999843 3489965 5567775 366 46778899988888887443 3455555444
Q ss_pred HHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCC
Q 006746 263 VVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPS 342 (632)
Q Consensus 263 i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~ 342 (632)
+++ +++||+++|++|.||+++|+ +++++|++++||++|++|+ .++|+++++ ++++|+||++| |.
T Consensus 149 i~~------~t~lV~~~h~et~tG~~~pi----i~~~~~~~~~vD~~q~~g~--~~id~~~~~--~~~~s~~K~~g--p~ 212 (377)
T 3e77_A 149 LNP------DASYVYYCANETVHGVEFDF----IPDVKGAVLVCDMSSNFLS--KPVDVSKFG--VIFAGAQKNVG--SA 212 (377)
T ss_dssp CCT------TCSCEEEESEETTTTEECSS----CCCCTTCCEEEECTTTTTS--SCCCGGGCS--EEEEEGGGTTS--CT
T ss_pred cCC------CccEEEEeCccCchheEchh----hhccCCCEEEEEcccccCC--CCCchhhcC--EEEEecccccC--CC
Confidence 443 45899999999999999998 4788999999999999998 699998876 68999999998 99
Q ss_pred ceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccc
Q 006746 343 GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 422 (632)
Q Consensus 343 G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~ 422 (632)
|+|+||+|+++++.++|...+ +. .|. ... +.+ .+.|||+++
T Consensus 213 G~g~l~~~~~~l~~~~~~~p~-~~--------~~~----------------~~~--~~~------------~~~~Tp~v~ 253 (377)
T 3e77_A 213 GVTVVIVRDDLLGFALRECPS-VL--------EYK----------------VQA--GNS------------SLYNTPPCF 253 (377)
T ss_dssp TCEEEEEETTSCSCCCTTSCG-GG--------CHH----------------HHH--TTT------------TCSSCCCHH
T ss_pred ccEEEEEcHHHHhhccCCCCc-hh--------hHH----------------HHh--hcC------------CCCCCchHH
Confidence 999999999998877653211 10 010 000 111 136889999
Q ss_pred hhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCC
Q 006746 423 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 501 (632)
Q Consensus 423 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~ 501 (632)
.|++|. +||+++.++ |+++|.+|.+.|+++|+++|.++ |.+.+ ++.
T Consensus 254 ~i~~l~------------------------~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~--------~g~~~-~~~ 300 (377)
T 3e77_A 254 SIYVMG------------------------LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNS--------QGFYV-CPV 300 (377)
T ss_dssp HHHHHH------------------------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS--------TTSEE-CCS
T ss_pred HHHHHH------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhc--------CCcee-cCC
Confidence 999998 999999999 79999999999999999999988 55665 343
Q ss_pred CCCCCCc-EEEEEEccCCC-CccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccC
Q 006746 502 IRFDRGP-ALAFNVFDWKR-EKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKA 579 (632)
Q Consensus 502 ~~~~rg~-ivaFnv~~~~G-~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 579 (632)
.+..|++ +++|++.+.++ +-++...+.+ +.++||.++.|.
T Consensus 301 ~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~-l~~~Gi~~~~g~------------------------------------- 342 (377)
T 3e77_A 301 EPQNRSKMNIPFRIGNAKGDDALEKRFLDK-ALELNMLSLKGH------------------------------------- 342 (377)
T ss_dssp CGGGBCSSEEEEEESSTTCCHHHHHHHHHH-HHHTTEESCBCC-------------------------------------
T ss_pred CHHHcCCcEEEEEcCCCCCchhHHHHHHHH-HHHCCcEEeCCC-------------------------------------
Confidence 3345665 69999998432 1122233333 446899987662
Q ss_pred CCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 580 NLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 580 ~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.||+|++.+||.|||++|+++|++|+..
T Consensus 343 -~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 343 -RSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp -TTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -CcCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12356999999999999999999999998764
No 3
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=5.1e-39 Score=344.25 Aligned_cols=347 Identities=14% Similarity=0.132 Sum_probs=262.5
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccc---cccchhHHHHHHHHHHHHHcC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLL---HGGQESGLESAMKKRIMDFLN 184 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~---~g~~~~~~~~~~R~~ia~~l~ 184 (632)
..+|+=++|.+++|+.|++++..++... .+|+.+.+. .+....++++++|+.++++||
T Consensus 4 ~~~~~f~pgpt~~~~~V~~a~~~~~~~~-------------------~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~ 64 (361)
T 3m5u_A 4 MRKINFSAGPSTLPLEILEQAQKELCDY-------------------QGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE 64 (361)
T ss_dssp CCCEECCSSSCCCCHHHHHHHHHTSSSG-------------------GGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT
T ss_pred cceEeecCCCCCCcHHHHHHHHHHHHhc-------------------ccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC
Confidence 4678888999999999999998765321 145555321 133457899999999999999
Q ss_pred CCCCCccEEE-eCCHHHHHHHHHhhCCCCCCCeE-EEeccccchhhHHHHHHHHhcCCEEEEEeccCCccc-cCHHHHHH
Q 006746 185 ISENDYGMVF-TANRTSAFKLLAESYPFMSVKNL-LTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLR-INSEKLRK 261 (632)
Q Consensus 185 a~~~ey~vvf-t~naT~al~lv~~sl~~~~gd~i-lt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~-i~~~~l~~ 261 (632)
+++ +++|+| |+|+|+++++++.++. +|+++ .+...+++ ..|+ ..++++|++|+++++++.... +++++ +
T Consensus 65 ~~~-~~~v~f~t~~~T~a~n~~~~~~~--~~~~~~~i~~~~~~--~~~~-~~a~~~G~~v~~~~~~~~g~~~~~~~~--~ 136 (361)
T 3m5u_A 65 LND-DYEVLFLQGGASLQFAMIPMNLA--LNGVCEYANTGVWT--KKAI-KEAQILGVNVKTVASSEESNFDHIPRV--E 136 (361)
T ss_dssp CCT-TEEEEEESSHHHHHHHHHHHHHC--CSSCEEEEECSHHH--HHHH-HHHHHTTCCEEEEEECTTTTSCSCCCC--C
T ss_pred CCC-CceEEEEcCcHHHHHHHHHHhcC--CCCeEEEEeCCHHH--HHHH-HHHHHcCCceEEEecccCcCCCcCChh--h
Confidence 973 468999 9999999999999984 67764 23333443 2564 456889999999999854321 34444 3
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCC
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
|+++ ++||+++|++|.||+++|. +++. |++++||++|++|+ .++|++. +||+++|+||++| |
T Consensus 137 -l~~~------t~lv~~~~~e~~tG~~~~~----i~~~-~~~~~vD~~q~~g~--~~id~~~--~d~~~~s~~K~~g--p 198 (361)
T 3m5u_A 137 -FSDN------ADYAYICSNNTIYGTQYQN----YPKT-KTPLIVDASSDFFS--RKVDFSN--IALFYGGVQKNAG--I 198 (361)
T ss_dssp -CCTT------SSEEEEESEETTTTEECSS----CCCC-SSCEEEECGGGTTS--SCCCCTT--EEEEEEETTTTSS--C
T ss_pred -cCCC------CCEEEEeCCCCCcceeCCc----cccc-CCEEEEEcccccCC--CCCCccc--CCEEEEechhccC--C
Confidence 5544 5899999999999999883 3444 99999999999998 6999985 6999999999998 9
Q ss_pred CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCccc
Q 006746 342 SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQ 421 (632)
Q Consensus 342 ~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~ 421 (632)
.|+|+||+|+++++.++|.+..++.+ |. ... +.+ .+.||||+
T Consensus 199 ~G~g~l~~~~~~~~~~~~~~~p~~~~--------~~----------------~~~--~~~------------~~~~Tp~v 240 (361)
T 3m5u_A 199 SGLSCIFIRKDMLERSKNKQIPSMLN--------YL----------------THA--ENQ------------SLFNTPPT 240 (361)
T ss_dssp TTCEEEEEEHHHHHHHHTCCCCGGGC--------HH----------------HHH--HTT------------TCSSCCCH
T ss_pred CccEEEEEcHHHHhhhcCCCCCceee--------hH----------------HHh--hcC------------CCCCCccH
Confidence 99999999999987776532111100 10 000 111 13688999
Q ss_pred chhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCC-cEEEEC
Q 006746 422 GEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNA-LVKIYG 499 (632)
Q Consensus 422 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p-~v~Iyg 499 (632)
+.|++|. +||+++.++ |+++|.+|.+.|+++|+++|.++ + .+++++
T Consensus 241 ~~i~~l~------------------------~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~--------~g~~~~~~ 288 (361)
T 3m5u_A 241 FAIYMFN------------------------LEMDWLLNQGGLDKVHEKNSQKATMLYECIDLS--------NGFYKGHA 288 (361)
T ss_dssp HHHHHHH------------------------HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTS--------TTSEEESS
T ss_pred HHHHHHH------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC--------CCeeeccC
Confidence 9999998 999999999 89999999999999999999998 4 346666
Q ss_pred CCCCCCC-CcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccccc
Q 006746 500 PKIRFDR-GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 578 (632)
Q Consensus 500 p~~~~~r-g~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 578 (632)
+. ..| .++++|++++.. .++. .+.+.++++||.++.|..
T Consensus 289 ~~--~~rs~~ivsf~~~~~~--~~~~-~~~~~L~~~gI~~~~g~~----------------------------------- 328 (361)
T 3m5u_A 289 DK--KDRSLMNVSFNIAKNK--DLEP-LFVKEAEEAGMIGLKGHR----------------------------------- 328 (361)
T ss_dssp CG--GGBCSSEEEEEESSCT--THHH-HHHHHHHHTTEECCBCCT-----------------------------------
T ss_pred CH--HHcCCeEEEEECCCch--hhhH-HHHHHHHHCCCEEecCCC-----------------------------------
Confidence 53 234 569999998621 1453 455667788999887621
Q ss_pred CCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 579 ANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 579 ~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||+|++.|||.|||++|+++|++|+..
T Consensus 329 ---~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 329 ---ILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp ---TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ---ccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 1246999999999999999999999998754
No 4
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=2e-35 Score=316.36 Aligned_cols=387 Identities=20% Similarity=0.285 Sum_probs=293.6
Q ss_pred hHHHHHHhhccCcCC----CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccc-ccccc
Q 006746 92 QIDQIRAKEYYQLSL----SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGG 166 (632)
Q Consensus 92 ~~d~iR~~ef~~L~~----~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~-~~~g~ 166 (632)
++..+|+ +||.++. ++.+|||+++.++.|+.+++++.+.+... .+|++.. +.++.
T Consensus 4 ~~~~~r~-~f~~~~~~~~g~~~i~l~~~~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~ 63 (406)
T 1kmj_A 4 SVDKVRA-DFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHG-------------------YAAVHRGIHTLSA 63 (406)
T ss_dssp CHHHHHH-TCGGGGCEETTEECEECCTTTCCCCCHHHHHHHHHHHHHT-------------------CCCCSSCSSHHHH
T ss_pred CHHHHHH-hCcccccccCCCceEEecCCccCCCCHHHHHHHHHHHHhh-------------------cCCCCCCcchHHH
Confidence 4677886 6998841 13799999999999999999877654321 0233221 11121
Q ss_pred chhHHHHHHHHHHHHHcCC-CCCCccEEEeCCHHHHHHHHHhhCC---CCCCCeEEE-eccccchhhHHHHHHHHhcCCE
Q 006746 167 QESGLESAMKKRIMDFLNI-SENDYGMVFTANRTSAFKLLAESYP---FMSVKNLLT-VYDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 167 ~~~~~~~~~R~~ia~~l~a-~~~ey~vvft~naT~al~lv~~sl~---~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~ 241 (632)
.....+.+.|+.+++++|+ +++ .|+||+|+|+|+.+++.++. +++||+|++ ...|++. ...+...++..|++
T Consensus 64 ~~~~~~~~l~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~-~~~~~~~~~~~g~~ 140 (406)
T 1kmj_A 64 QATEKMENVRKRASLFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHAN-IVPWQMLCARVGAE 140 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCGG--GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGG-THHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCC--eEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHH-HHHHHHHHHhCCCE
Confidence 2346778999999999999 443 79999999999999999985 789999765 4578763 33335566778999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG 320 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld 320 (632)
++.++.+ +++.+++++|+++|+++ ++++++++.+|+||..+|++ |.++|+++|+++++|+++..|. .+++
T Consensus 141 ~~~~~~~-~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~--~~~~ 211 (406)
T 1kmj_A 141 LRVIPLN-PDGTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMH--HPVD 211 (406)
T ss_dssp EEEECBC-TTSCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTT--SCCC
T ss_pred EEEEecC-CCCCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCC--CCCc
Confidence 9999987 56778999999988653 58999999999999999999 9999999999999999999886 4667
Q ss_pred CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCC-Cceeecccc-cccccccccCCCCCCccccchhhhhh
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAK-KQLWLTDEFSSCETEPEQTSKSKQEK 398 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~e~ 398 (632)
+..+++|++++|+||.|| |.|+|+++++++.++.+.+...| +.+...... ...|. . .+..+
T Consensus 212 ~~~~~~d~~~~s~~K~~g--~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~--- 274 (406)
T 1kmj_A 212 VQALDCDFYVFSGHKLYG--PTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWT--K----------APWRF--- 274 (406)
T ss_dssp HHHHTCSEEEEEGGGTTS--CTTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEEC--C----------TTGGG---
T ss_pred ccccCCCEEEEEchhccC--CCCcEEEEEeHHHHhhcCCcccCCCceeecccccccccC--C----------Cchhc---
Confidence 777789999999999988 77899999999888778766554 222211000 00000 0 00001
Q ss_pred hccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHH
Q 006746 399 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLV 478 (632)
Q Consensus 399 e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~ 478 (632)
+.|++++..+.++. .+++++.+.+++.+.++.+.+.+++.
T Consensus 275 ----------------~~~~~~~~~~~a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~ 314 (406)
T 1kmj_A 275 ----------------EAGTPNTGGIIGLG------------------------AALEYVSALGLNNIAEYEQNLMHYAL 314 (406)
T ss_dssp ----------------CCSSCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ----------------cCCCCCHHHHHHHH------------------------HHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 23455555666665 78888877799999999999999999
Q ss_pred HHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhh
Q 006746 479 NALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 558 (632)
Q Consensus 479 ~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~ 558 (632)
+.|.++ |.+++++|. .+++++.|.+.+ ++...+.+.+.++||.++.|..|.......+
T Consensus 315 ~~L~~~--------~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~------ 372 (406)
T 1kmj_A 315 SQLESV--------PDLTLYGPQ---NRLGVIAFNLGK-----HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYY------ 372 (406)
T ss_dssp HHHTTS--------TTEEEESCT---TCCSEEEEEETT-----CCHHHHHHHHHHTTEECEEECTTCHHHHHHT------
T ss_pred HHHhcC--------CCeEEecCC---CcCCEEEEEECC-----CCHHHHHHHHhhCCcEEEeccccchHHHHhc------
Confidence 999887 568888764 368999998754 4677777888889999999988886432111
Q ss_pred hhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 559 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 559 ~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+ ..+.||+|++.++|.+|++++++.|+++++
T Consensus 373 ---------------------g-~~~~iRis~~~~~t~~~i~~~~~~l~~~~~ 403 (406)
T 1kmj_A 373 ---------------------N-VPAMCRASLAMYNTHEEVDRLVTGLQRIHR 403 (406)
T ss_dssp ---------------------T-CSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ---------------------C-CCCeEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 0 136999999999999999999999999875
No 5
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-35 Score=317.14 Aligned_cols=373 Identities=16% Similarity=0.156 Sum_probs=283.7
Q ss_pred hHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHH
Q 006746 92 QIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGL 171 (632)
Q Consensus 92 ~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~ 171 (632)
+++.+|+ +||.++ ++.+|||+++.++.|+.+++++.+.+... .+|+++.+.+|......
T Consensus 12 ~~~~~r~-~fp~~~-~~~~~ld~~~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 70 (406)
T 3cai_A 12 DVARVRG-LHPSLG-DGWVHFDAPAGMLIPDSVATTVSTAFRRS-------------------GASTVGAHPSARRSAAV 70 (406)
T ss_dssp CHHHHHH-TCTTTT-SSCEECBGGGCCCCCHHHHHHHHHHHHHC-------------------CSSSCSSSHHHHHHHHH
T ss_pred cHHHHHH-hhhhcC-CCeEEEeCCCcCCCCHHHHHHHHHHHHhc-------------------CCCCCCccHHHHHHHHH
Confidence 6778886 699994 35899999999999999999977644211 13444333344334577
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC--CCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY--PFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl--~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
++++|+.+++++|++++ .|+||+|+|+++.+++.++ .+++||+|++. .+|++ ....+..++++.|++++.++++
T Consensus 71 ~~~l~~~la~~~g~~~~--~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~-~~~~~~~~~~~~g~~v~~v~~~ 147 (406)
T 3cai_A 71 LDAAREAVADLVNADPG--GVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEA-NIAPWLRAAHRYGAKVKWAEVD 147 (406)
T ss_dssp HHHHHHHHHHHHTCCGG--GEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGG-GTHHHHHHHHHHBCEEEEECCC
T ss_pred HHHHHHHHHHHhCCCCC--eEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHH-HHHHHHHHHHhcCCeEEEEecC
Confidence 88999999999999754 7999999999999999988 57889997654 57776 3444455556679999999987
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
..++.+++++|+++|+++ +++|++++.+|+||..+|++ |.++|+++|+++++|++|..|. .++++..+++|
T Consensus 148 ~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~--~~~~~~~~~~d 219 (406)
T 3cai_A 148 IETGELPTWQWESLISKS------TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPY--RLLDIRETDAD 219 (406)
T ss_dssp TTTCCCCGGGHHHHCCTT------EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTT--CCCCHHHHCCS
T ss_pred cccCCcCHHHHHHHhCCC------ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCC--CCCCchhcCCC
Confidence 456778999999988653 58999999999999999999 9999999999999999999876 46777777899
Q ss_pred EEEEccccccCCCCCceE-EEEEeCCCccccCCCC--CCCceeecccccccccccccCCCCCCccccchhhhhhhccccC
Q 006746 328 FLICSFYQIFGENPSGFG-CLFVKKSTVPILVDNT--SSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 404 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G-~L~Vr~~~~~~L~~~~--~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~ 404 (632)
++++|+||++| |. +| +++++++.++.+++.. +|+.. +..+
T Consensus 220 ~~~~s~~K~~g--~~-~G~~~~~~~~~~~~l~~~~~~~~~~~-------------------------~~~~--------- 262 (406)
T 3cai_A 220 VVTVNAHAWGG--PP-IGAMVFRDPSVMNSFGSVSTNPYATG-------------------------PARL--------- 262 (406)
T ss_dssp EEEEEGGGGTS--CS-CEEEEESCHHHHHTSCCCCSCTTCCG-------------------------GGGG---------
T ss_pred EEEeehhhhcC--CC-cCeEEEEehHHHhhcCCcccCCCCCc-------------------------cccc---------
Confidence 99999999998 75 88 9999988776665532 11100 0001
Q ss_pred CCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC--------------HHHHHHHH
Q 006746 405 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG--------------LTMISRRG 470 (632)
Q Consensus 405 f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G--------------l~~I~~r~ 470 (632)
+.|+++.+.+.++. .+++.+.++| ++.+.++.
T Consensus 263 ----------~~~t~~~~~~~a~~------------------------~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 308 (406)
T 3cai_A 263 ----------EIGVHQFGLLAGVV------------------------ASIEYLAALDESARGSRRERLAVSMQSADAYL 308 (406)
T ss_dssp ----------CCSCCCHHHHHHHH------------------------HHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHH
T ss_pred ----------cCCCccHHHHHHHH------------------------HHHHHHHHhccccccchhhhhhhhHHHHHHHH
Confidence 13445555566665 7888887766 78999999
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHh
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~ 550 (632)
+.+.+++.+.|.++ |.+++++|. ..+++++.|.+.+ ++...+.+.+.++||.++.|. +.. ...
T Consensus 309 ~~~~~~l~~~L~~~--------~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~L~~~gi~v~~g~-~~~-~~~ 371 (406)
T 3cai_A 309 NRVFDYLMVSLRSL--------PLVMLIGRP--EAQIPVVSFAVHK-----VPADRVVQRLADNGILAIANT-GSR-VLD 371 (406)
T ss_dssp HHHHHHHHHHHHTC--------TTEEECCCC--SSBCSEEEEEETT-----BCHHHHHHHHHHTTEECEECC-SCH-HHH
T ss_pred HHHHHHHHHHHhcC--------CCeEEcCCc--cccCCEEEEEECC-----cCHHHHHHHHHHCCcEEecCC-hHH-HHH
Confidence 99999999999987 668888774 2467789998875 566777776677899999886 111 100
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
.+ + ...+.+.||+|++.+++.|||+++++.|+++
T Consensus 372 ~~----------g---------------~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 372 VL----------G---------------VNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HH----------T---------------TTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred Hc----------C---------------CCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 00 0 0012468999999999999999999998753
No 6
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.8e-34 Score=308.17 Aligned_cols=390 Identities=18% Similarity=0.252 Sum_probs=292.2
Q ss_pred hhHHHHHHhhccCcCCCC------ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc-ccc
Q 006746 91 YQIDQIRAKEYYQLSLSN------HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLL 163 (632)
Q Consensus 91 ~~~d~iR~~ef~~L~~~~------~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s-~~~ 163 (632)
..+..+|+ +||.+ ++ .+|||++..++.|+.+++++.+.+... .+|++. ...
T Consensus 8 ~~~~~~r~-~f~~~--~~~~~g~~~i~l~~~~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~ 65 (420)
T 1t3i_A 8 SLAATVRQ-DFPIL--NQEINGHPLVYLDNAATSQKPRAVLEKLMHYYEND-------------------NANVHRGAHQ 65 (420)
T ss_dssp CHHHHHGG-GCGGG--SCEETTEECEECBTTTCCCCCHHHHHHHHHHHHHT-------------------CCCC--CCSH
T ss_pred HHHHHHHH-hCCcc--ccccCCCceEEecCCccCCCCHHHHHHHHHHHHhc-------------------cCCCCcccch
Confidence 35567775 69988 44 799999999999999999876644211 123331 222
Q ss_pred cccchhHHHHHHHHHHHHHcCC-CCCCccEEEeCCHHHHHHHHHhhCC---CCCCCeEEEe-ccccchhhHHHHHHHHhc
Q 006746 164 HGGQESGLESAMKKRIMDFLNI-SENDYGMVFTANRTSAFKLLAESYP---FMSVKNLLTV-YDYESEAVEAMIRTSEKR 238 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a-~~~ey~vvft~naT~al~lv~~sl~---~~~gd~ilt~-~d~~s~~v~~~~~~a~~~ 238 (632)
|+......+.+.|+.+++++|. +++ .|+||+|+|+|+.+++.++. +++||+|++. ..|++. ...+...++..
T Consensus 66 y~~~~~~~~~~l~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~-~~~~~~~~~~~ 142 (420)
T 1t3i_A 66 LSVRATDAYEAVRNKVAKFINARSPR--EIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSN-LVPWQMVAAKT 142 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCGG--GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGG-THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCC--eEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHH-HHHHHHHHHhc
Confidence 4432346678999999999999 543 79999999999999999983 7889997654 577763 33334566778
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCC
Q 006746 239 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMD 317 (632)
Q Consensus 239 G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~ 317 (632)
|++++.++.+ .++.+++++|+++|+++ +++|++++.+|+||..+|++ |.++|+++|+++++|+++..+. .
T Consensus 143 g~~~~~v~~~-~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~ 213 (420)
T 1t3i_A 143 GAVLKFVQLD-EQESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPH--Y 213 (420)
T ss_dssp CCEEEEECBC-TTSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTT--S
T ss_pred CcEEEEeccC-CCCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCC--c
Confidence 9999999987 66779999999988653 58999999999999999999 9999999999999999999886 3
Q ss_pred CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCC-CceeecccccccccccccCCCCCCccccchhhh
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
++++..+++|++++|+||++| |.|+|+++++++.++.+.+...+ +...........|. . . +..+
T Consensus 214 ~~~~~~~~~di~~~s~sK~~~--~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~-----~~~~- 278 (420)
T 1t3i_A 214 PLDVQLIDCDWLVASGHKMCA--PTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTG--E-----L-----PHKF- 278 (420)
T ss_dssp CCCHHHHTCSEEEEEGGGTTS--CTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEEC--C-----T-----TGGG-
T ss_pred cCchhhcCCCEEEEehhhhcC--CCceEEEEEchHHHhhcCceecCCCccccccccccCCC--C-----c-----hhhc-
Confidence 567777789999999999988 77899999999887777665443 22221100000000 0 0 0001
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
..|++++..+.++. .+|+++.+.|++.+.++.+.+.++
T Consensus 279 ------------------~~~~~~~~~~~a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~ 316 (420)
T 1t3i_A 279 ------------------EAGTPAIAEAIALG------------------------AAVDYLTDLGMENIHNYEVELTHY 316 (420)
T ss_dssp ------------------CCSSCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ------------------cCCCccHHHHHHHH------------------------HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 12344455555554 578888878999999999999999
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCC-CCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRF-DRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 555 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~-~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~ 555 (632)
+.+.|.++ |.++++.|.... .+++++.|.+.+ ++...+.+.+.++||.++.|..|.......+
T Consensus 317 l~~~L~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~--- 380 (420)
T 1t3i_A 317 LWQGLGQI--------PQLRLYGPNPKHGDRAALASFNVAG-----LHASDVATMVDQDGIAIRSGHHCTQPLHRLF--- 380 (420)
T ss_dssp HHHHHHTC--------TTEEEESCCGGGSCBCSEEEEEETT-----BCHHHHHHHHHTTTEECBCSCTTCHHHHHHT---
T ss_pred HHHHHHhC--------CCeEEeCCCccccccCCEEEEEECC-----CCHHHHHHHHHHCCeEEeeccccchHHHHhc---
Confidence 99999987 568888874211 358999998764 4667777888889999999988876432111
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ ..+.||+|++.+++.+||+++++.|+++++.
T Consensus 381 ------------------------g-~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 381 ------------------------D-ASGSARASLYFYNTKEEIDLFLQSLQATIRF 412 (420)
T ss_dssp ------------------------T-CCCCEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------C-CCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 1468999999999999999999999998764
No 7
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=1.2e-34 Score=307.14 Aligned_cols=367 Identities=17% Similarity=0.141 Sum_probs=272.4
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
.||||+++.++.|+.+++++.+.+... .+|+++.+.++....+.++++|+.+++++|++++
T Consensus 1 ~iyld~~~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 61 (382)
T 4hvk_A 1 MAYFDYTSAKPVDERILEAMLPYMTES-------------------FGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG 61 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHHHHHTS-------------------CCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred CEeecCCCcCCCCHHHHHHHHHHHHhh-------------------cCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 379999999999999999987654321 1344443333334467889999999999999864
Q ss_pred CccEEEeCCHHHHHHHHHhhCCC---CCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 189 DYGMVFTANRTSAFKLLAESYPF---MSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~~---~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
.|+||+|+|+|+.+++.++.+ ++||+|++. .+|++ .. .....+++.|++++.++++ +++.+|+++|+++++
T Consensus 62 --~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~-~~-~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~ 136 (382)
T 4hvk_A 62 --TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMS-VI-NPAKFLQKQGFEVEYIPVG-KYGEVDVSFIDQKLR 136 (382)
T ss_dssp --EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHH-HH-HHHHHHHHTTCEEEEECBC-TTSCBCHHHHHHHCC
T ss_pred --eEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHH-HH-HHHHHHHhcCCEEEEeccC-CCCCcCHHHHHHHhc
Confidence 799999999999999999854 889997754 57775 22 2233456789999999998 677899999999987
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG 343 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G 343 (632)
++ ++++++++.+|+||...|++ |.++|+++|+ +++|+++..|. .++++..+++|++++|+||++| |.|
T Consensus 137 ~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~g--~~g 205 (382)
T 4hvk_A 137 DD------TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQ--IEVDVEKIGADMLTISSNDIYG--PKG 205 (382)
T ss_dssp TT------EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTT--BCCCHHHHTCSEEEEESGGGTS--CTT
T ss_pred cC------ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCC--CCCCchhcCCCEEEEeHHHhcC--CCc
Confidence 54 48999999999999999999 9999999999 99999998886 4677777789999999999988 889
Q ss_pred eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 344 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 344 ~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
+|+++++++. .+.+...+|... ..+ +.++++.+.
T Consensus 206 ~g~~~~~~~~--~~~~~~~~~~~~-------------------------~~~-------------------~~~~~~~~~ 239 (382)
T 4hvk_A 206 VGALWIRKEA--KLQPVILGGGQE-------------------------NGL-------------------RSGSENVPS 239 (382)
T ss_dssp CEEEEEETTC--CCCCSSCSSCTG-------------------------GGT-------------------SCSCCCHHH
T ss_pred eEEEEEcCcc--CcCcccccCCCc-------------------------Ccc-------------------ccCCcCHHH
Confidence 9999999876 455444331100 000 134445555
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 503 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~ 503 (632)
+.++. .++++.. .+++.+.++.+.+.+++.+.|.++ |.++++++..
T Consensus 240 ~~~~~------------------------~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~~~- 285 (382)
T 4hvk_A 240 IVGFG------------------------KAAEITA-MEWREEAERLRRLRDRIIDNVLKI--------EESYLNGHPE- 285 (382)
T ss_dssp HHHHH------------------------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTS--------TTEEECSCSS-
T ss_pred HHHHH------------------------HHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcC--------CCeEEeCCcc-
Confidence 56665 7777665 378999999999999999999876 6788888752
Q ss_pred CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCC
Q 006746 504 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 583 (632)
Q Consensus 504 ~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 583 (632)
...+.++.|.+.+ ++...+.+.+.++||.++.|..|........ ..+... +. . .....
T Consensus 286 ~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~-----~~~~~~---g~----~-----~~~~~ 343 (382)
T 4hvk_A 286 KRLPNNVNVRFSY-----IEGESIVLSLDMAGIQASTGSACSSKTLQPS-----HVLMAC---GL----K-----HEEAH 343 (382)
T ss_dssp SBCTTEEEEEETT-----CCHHHHHHHHHHTTCBCBCC--------CCC-----HHHHHT---TC----C-----HHHHH
T ss_pred ccCCCEEEEEECC-----CCHHHHHHHHHHCCEEEeeCCccCCCCCcch-----HHHHHc---CC----C-----hhhcC
Confidence 2234689998876 5677777777788999999988876532110 001000 00 0 00114
Q ss_pred cEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 584 TVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 584 ~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.||+|++.++|.|||+++++.|++++..
T Consensus 344 ~~iRl~~~~~~t~e~i~~~~~~l~~~~~~ 372 (382)
T 4hvk_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999998865
No 8
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=100.00 E-value=7.8e-35 Score=320.64 Aligned_cols=393 Identities=12% Similarity=0.104 Sum_probs=281.1
Q ss_pred HHHHHHhhccCcC--------------CCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccc
Q 006746 93 IDQIRAKEYYQLS--------------LSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNL 158 (632)
Q Consensus 93 ~d~iR~~ef~~L~--------------~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~ 158 (632)
+..+|+ +|+... .++.+|||+++.|+.|+.+.+++...+..+ .. ...+.
T Consensus 39 l~~~r~-~f~~~~~~~~~~~~~~~~~~~~~~iyld~~~~g~~p~~v~~~i~~~l~~~---------~~-------~~~~~ 101 (465)
T 3e9k_A 39 LRHFRE-CFYIPKIQDLPPVDLSLVNKDENAIYFLGNSLGLQPKMVKTYLEEELDKW---------AK-------IAAYG 101 (465)
T ss_dssp TGGGGG-GEECCBGGGSTTCCGGGSCTTCBCEECBTTTSCCEETTHHHHHHHHHHHH---------HH-------HGGGG
T ss_pred HHHHHH-hcCCCCcccccccccccccCCCCeEEecCCccCCChHHHHHHHHHHHHHH---------Hh-------hCCcc
Confidence 445665 587653 126799999999999999977765543211 00 00000
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC--CCCCCCeEEE-eccccchhhHHHHHHH
Q 006746 159 KTQLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY--PFMSVKNLLT-VYDYESEAVEAMIRTS 235 (632)
Q Consensus 159 ~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl--~~~~gd~ilt-~~d~~s~~v~~~~~~a 235 (632)
+... +. ...++.+++|+++++++|++++ +|+||+|+|+++++++.++ |..++++|++ ...|++....+ ...+
T Consensus 102 ~~~~-~~-~~~~~~~~l~~~la~~~g~~~~--~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~-~~~~ 176 (465)
T 3e9k_A 102 HEVG-KR-PWITGDESIVGLMKDIVGANEK--EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAI-ESQL 176 (465)
T ss_dssp GTSS-SS-CGGGTTHHHHGGGHHHHTCCGG--GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHH-HHHH
T ss_pred cccC-Cc-cHHHhHHHHHHHHHHHcCCCcC--CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHH-HHHH
Confidence 0000 00 1124556789999999999865 7999999999999999998 4445666765 45787643434 4456
Q ss_pred HhcCCEE-----EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecc
Q 006746 236 EKRGARV-----MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 236 ~~~G~~v-----~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaa 309 (632)
+..|+++ ..++.+ .++.++.++|+++|++.+ +++++|++++++|.||..+|++ |.++|+++|+++++|++
T Consensus 177 ~~~G~~~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~---~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a 252 (465)
T 3e9k_A 177 QLHGLNIEESMRMIKPRE-GEETLRIEDILEVIEKEG---DSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLA 252 (465)
T ss_dssp HHTTCCHHHHEEEECCCT-TCSSCCHHHHHHHHHHHG---GGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHcCCcceeeeEEEecCC-CCCccCHHHHHHHHHhcC---CCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhh
Confidence 7789875 333544 567789999999997431 2469999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEcccccc-CCCCCceEEEEEeCCCccccCCCCCC--CceeecccccccccccccCCCCC
Q 006746 310 ALGPKDMDSFGLSLVRPDFLICSFYQIF-GENPSGFGCLFVKKSTVPILVDNTSS--GMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 310 q~~g~~m~~ldls~~~~Df~~~S~hK~~-G~~P~G~G~L~Vr~~~~~~L~~~~~g--G~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
|++|. .++++..+++||+++|+||++ |. |.|+|+++++++.++.+.+...| |.-.. ..+. ... .+
T Consensus 253 ~~~g~--~~~~~~~~~~D~~~~s~~K~l~~g-p~~~g~l~~~~~~~~~~~~~~~g~~~~~~~----~~~~-~~~----~~ 320 (465)
T 3e9k_A 253 HAVGN--VELYLHDWGVDFACWCSYKYLNAG-AGGIAGAFIHEKHAHTIKPALVGWFGHELS----TRFK-MDN----KL 320 (465)
T ss_dssp TTTTT--SCCCHHHHTCCEEEECSSSTTCCC-TTCCCEEEECGGGTTTSCCSSCCGGGBCHH----HHTT-CCS----CC
T ss_pred hhcCC--cCCchhhcCCCEEEECcccccccC-CCceEEEEEcHHHHhhcCCcccCccCCCCC----cccc-cCC----Cc
Confidence 99997 688998999999999999977 33 88999999999998877766444 11000 0000 000 00
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 466 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I 466 (632)
... .++ .-.+.||+++..+.++. ++++.+...|++.+
T Consensus 321 ~~~----------------~~~---~~~~~gt~~~~~~~a~~------------------------aal~~~~~~~~~~~ 357 (465)
T 3e9k_A 321 QLI----------------PGV---CGFRISNPPILLVCSLH------------------------ASLEIFKQATMKAL 357 (465)
T ss_dssp CBC----------------SSG---GGGCCSCCCHHHHHHHH------------------------HHHHHHHHHCHHHH
T ss_pred CcC----------------CCh---HHhccCCccHHHHHHHH------------------------HHHHHHHHcCHHHH
Confidence 000 000 01246778888888887 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCC--CCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccC
Q 006746 467 SRRGRCLINWLVNALMKLQHP--NTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLH 544 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~--~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c 544 (632)
.+|.+.+.+++.+.|.++... ...+.+.+++++|.+...++++++|.+.. +...+.+.+.++||.++.+
T Consensus 358 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~------~~~~l~~~L~~~Gi~v~~~--- 428 (465)
T 3e9k_A 358 RKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV------PNKDVFQELEKRGVVCDKR--- 428 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC------TTCCHHHHHHTTTEECEEE---
T ss_pred HHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC------CHHHHHHHHHHCCEEEecC---
Confidence 999999999999999986210 00012568999987555679999998862 2234555555679987511
Q ss_pred ChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 545 HIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..++||+|+ ++++|++||+++++.|++.++.
T Consensus 429 -------------------------------------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 429 -------------------------------------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp -------------------------------------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred -------------------------------------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 246999999 8999999999999999998875
No 9
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=2.9e-33 Score=297.55 Aligned_cols=367 Identities=17% Similarity=0.133 Sum_probs=269.7
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
.+|||+++.++.|+.+++++.+.+... .+|+++.+.++....+.++++|+.+++++|++++
T Consensus 1 ~~yld~~~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~ 61 (382)
T 4eb5_A 1 MAYFDYTSAKPVDERILEAMLPYMTES-------------------FGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG 61 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHHHHHTS-------------------CCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred CeeeccCCCCCCCHHHHHHHHHHHHhc-------------------cCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 379999999999999999987654321 1344432222323457888999999999999764
Q ss_pred CccEEEeCCHHHHHHHHHhhCC---CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 189 DYGMVFTANRTSAFKLLAESYP---FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~---~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
.|+||+|+|+|+.+++.++. .++||+|++. ..|++ .... ...++..|++++.++++ +++.+|+++|+++|+
T Consensus 62 --~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~ 136 (382)
T 4eb5_A 62 --TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMS-VINP-AKFLQKQGFEVEYIPVG-KYGEVDVSFIDQKLR 136 (382)
T ss_dssp --EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHH-HHHH-HHHHTTTTCEEEEECBC-TTSCBCHHHHHHHCC
T ss_pred --eEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchH-HHHH-HHHHHhCCcEEEEeccC-CCCccCHHHHHHHhc
Confidence 79999999999999999984 2789997754 56765 2232 33445689999999997 567899999999886
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG 343 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G 343 (632)
++ ++++++++.+|+||..+|++ |+++|+++|++ ++|+++..|. .++++..+++|++++|+||++| |.|
T Consensus 137 ~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~--~~~~~~~~~~di~~~s~sK~~g--~~g 205 (382)
T 4eb5_A 137 DD------TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQ--IEVDVEKIGADMLTISSNDIYG--PKG 205 (382)
T ss_dssp TT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTT--BCCCHHHHTCSEEEEETGGGTC--CSS
T ss_pred CC------CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCC--cccCccccCCCEEEeehHHhcC--CCc
Confidence 53 58999999999999999999 99999999999 9999998876 4667766789999999999988 889
Q ss_pred eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 344 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 344 ~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
+|+++++++. .+.+...+|... . .+ ..|+++.+.
T Consensus 206 ~G~~~~~~~~--~l~~~~~~~~~~------------~-------------~~-------------------~~~~~~~~~ 239 (382)
T 4eb5_A 206 VGALWIRKEA--KLQPVILGGGQE------------N-------------GL-------------------RSGSENVPS 239 (382)
T ss_dssp CEEEEEETTC--CCCCSSCSSCTG------------G-------------GT-------------------SCSCCCHHH
T ss_pred eEEEEEcccc--ccCceecCCCcc------------c-------------cc-------------------cCCCccHHH
Confidence 9999999874 244333221100 0 00 123344444
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 503 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~ 503 (632)
+.++. .+|+.+.+ +++.+.++.+.+.+++.+.|.++ |.+++++|..
T Consensus 240 ~~~~~------------------------~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~~~- 285 (382)
T 4eb5_A 240 IVGFG------------------------KAAEITAM-EWREEAERLRRLRDRIIDNVLKI--------EESYLNGHPE- 285 (382)
T ss_dssp HHHHH------------------------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTS--------TTEEECSCSS-
T ss_pred HHHHH------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhC--------CCeEEeCCcc-
Confidence 45554 78887765 68999999999999999999886 6688887642
Q ss_pred CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCC
Q 006746 504 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 583 (632)
Q Consensus 504 ~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 583 (632)
...++++.|.+.+ ++...+.+.+.++||.++.|..|.+...... .++... +. . ...+.
T Consensus 286 ~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~-----~~~~~~---g~---~------~~~~~ 343 (382)
T 4eb5_A 286 KRLPNNVNVRFSY-----IEGESIVLSLDMAGIQASTGSACSSKTLQPS-----HVLMAC---GL---K------HEEAH 343 (382)
T ss_dssp SBCTTEEEEEETT-----SCHHHHHHHHHHHTCBCBCCCGGGTSSCCCC-----HHHHHT---TC---C------HHHHT
T ss_pred cCCCCEEEEEeCC-----cCHHHHHHHHHHCCEEEeccccccCCCCccc-----HHHHHc---CC---C------hhccC
Confidence 2247788898864 4666676666678999999987765321100 011100 00 0 00124
Q ss_pred cEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 584 TVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 584 ~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.||+|++.++|.+||+++++.|+++++.
T Consensus 344 ~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (382)
T 4eb5_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999998764
No 10
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=2.5e-32 Score=291.06 Aligned_cols=376 Identities=13% Similarity=0.126 Sum_probs=275.4
Q ss_pred hHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHH
Q 006746 92 QIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGL 171 (632)
Q Consensus 92 ~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~ 171 (632)
.++++|+ +|+.+ ++.+|||+++.++.|+.+++++.+.+... ...++.++..|.. ....
T Consensus 3 ~~~~~r~-~f~~~--~~~i~l~~~~~~~~~~~v~~a~~~~~~~~------------------~~~~~~~~~~y~~-~~~~ 60 (390)
T 1elu_A 3 MITPSLH-QFPGL--ANKTYFNFGGQGILPTVALEAITAMYGYL------------------QENGPFSIAANQH-IQQL 60 (390)
T ss_dssp --------CCGGG--TTSEECCTTTCCCCCHHHHHHHHHHHHHH------------------HHHCSSSHHHHHH-HHHH
T ss_pred chHHHHH-hcCCC--CCeEEecCCccCCCCHHHHHHHHHHHHHH------------------hccCCcchhhHHH-HHHH
Confidence 4677885 69977 67999999999999999999876643210 0012211111211 1356
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC-
Q 006746 172 ESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW- 249 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~- 249 (632)
+.+.|+.|++++|++++ .|+||+|+|+|+.+++.++.+++||+|++. ..|++ ....+...++..|++++.++.+.
T Consensus 61 ~~~l~~~la~~~g~~~~--~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~ 137 (390)
T 1elu_A 61 IAQLRQALAETFNVDPN--TITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPG-IIAIVQAIAARFGITYRFFPVAAT 137 (390)
T ss_dssp HHHHHHHHHHHTTSCGG--GEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHH-HHHHHHHHHHHHCCEEEEECCGGG
T ss_pred HHHHHHHHHHHcCCCHH--HEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccH-HHHHHHHHHHHhCcEEEEEcCCCC
Confidence 78999999999999765 799999999999999999988899997754 56765 33333455677899999998863
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHh----hCCcEEEEeccccCCCCCCCCCCCCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQ----ENDWHILIDACALGPKDMDSFGLSLV 324 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~----~~g~~vlvDaaq~~g~~m~~ldls~~ 324 (632)
.++.+++++|++.|++ +++++++++.+|+||..+|++ |.++|+ ++|+++++|.++..|. .++++..+
T Consensus 138 ~~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~--~~~~~~~~ 209 (390)
T 1elu_A 138 LNQGDAAAVLANHLGP------KTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGS--LPLDFSRL 209 (390)
T ss_dssp SSSSCHHHHHHTTCCT------TEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTT--BCCCTTTS
T ss_pred CCccchHHHHHHhcCC------CceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCC--cCCChhhc
Confidence 3556888999887764 358999999999999999999 999999 9999999999998886 47778788
Q ss_pred CCcEEEEcccc-ccCCCCCceEEEEEeCCCccccCCCCCC-CceeecccccccccccccCCCCCCccccchhhhhhhccc
Q 006746 325 RPDFLICSFYQ-IFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 402 (632)
Q Consensus 325 ~~Df~~~S~hK-~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt 402 (632)
++|++++|+|| ++| |.|+|+++++++.++.+.+...| +.+....... .|...+ ....+
T Consensus 210 ~~d~~~~s~~K~~~~--~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~----------~~~~~------- 269 (390)
T 1elu_A 210 EVDYYAFTGHKWFAG--PAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGE-PTGWAE----------GGKRF------- 269 (390)
T ss_dssp CCSEEEEESSSTTCC--CTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSC-EEEECS----------GGGGG-------
T ss_pred CCCEEEccccccccC--CCceEEEEECHHhHhhcCCccccCCcccccccCc-cccccc----------chHhh-------
Confidence 99999999999 666 77999999999998888776555 3322110000 000000 00000
Q ss_pred cCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC-HHHHHHHHHHHHHHHHHHH
Q 006746 403 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG-LTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 403 ~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G-l~~I~~r~~~L~~~L~~~L 481 (632)
..|+++.+.+.++. .+|+.+...| ++.+.++.+.+.+++.+.|
T Consensus 270 ------------~~~~~~~~~~~a~~------------------------~al~~l~~~~~~~~~~~~~~~~~~~l~~~L 313 (390)
T 1elu_A 270 ------------EVATSAYPQYAGLL------------------------AALQLHQRQGTAEERYQAICQRSEFLWRGL 313 (390)
T ss_dssp ------------CCSCCCHHHHHHHH------------------------HHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------CCCCCCHHHHHHHH------------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 13445555555554 7888887777 9999999999999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 561 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~ 561 (632)
.++ |.+++++|. ..+++++.|.+.+ | ++...+.+.+.++||.++.|.
T Consensus 314 ~~~--------~g~~~~~~~--~~~~~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~~~------------------- 360 (390)
T 1elu_A 314 NQL--------PHVHCLATS--APQAGLVSFTVDS--P--LGHRAIVQKLEEQRIYLRTIA------------------- 360 (390)
T ss_dssp HHS--------TTEEESCSS--CCSSSEEEEEECS--S--SCHHHHHHHHHHTTEECEEET-------------------
T ss_pred Hhc--------CCcEEecCc--cccccEEEEEcCC--C--CCHHHHHHHHHHCCEEEEecC-------------------
Confidence 987 568888763 3468899998752 1 456666665667899987551
Q ss_pred hhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 562 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
..+.||+|+++++|.+|++++++.|+++
T Consensus 361 --------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 361 --------------------DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp --------------------TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred --------------------CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 1258999999999999999999998764
No 11
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=1.1e-32 Score=299.54 Aligned_cols=385 Identities=15% Similarity=0.144 Sum_probs=267.9
Q ss_pred HHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHH
Q 006746 96 IRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAM 175 (632)
Q Consensus 96 iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~ 175 (632)
.|..+|+++ .+.+|||+++.++.|+.+++++.+.+... .+||++.+.++....+.++++
T Consensus 8 ~~~~~~~~~--~~~~~Ld~~~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~l 66 (432)
T 3a9z_A 8 ARGSVESPP--NRKVYMDYNATTPLEPEVIQAVTEAMKEA-------------------WGNPSSSYVAGRKAKDIINTA 66 (432)
T ss_dssp ------------CCEECBTTTCCCCCHHHHHHHHHHHHHC-------------------CSCTTCSSHHHHHHHHHHHHH
T ss_pred ccccccCCC--CCcEEeeCCccCCCCHHHHHHHHHHHHHh-------------------cCCCccCcHHHHHHHHHHHHH
Confidence 456689988 78999999999999999999977643211 133433332333345778899
Q ss_pred HHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--C-----CCCC-------------eEE-EeccccchhhHHHHHH
Q 006746 176 KKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--F-----MSVK-------------NLL-TVYDYESEAVEAMIRT 234 (632)
Q Consensus 176 R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--~-----~~gd-------------~il-t~~d~~s~~v~~~~~~ 234 (632)
|+.+++++|++++ .|+||+|+|+|+.+++.++. | ++|| +|+ +..+|++ ....+..+
T Consensus 67 ~~~la~~~g~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s-~~~~~~~~ 143 (432)
T 3a9z_A 67 RASLAKMIGGKPQ--DIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDS-IRLPLEHL 143 (432)
T ss_dssp HHHHHHHHTCCGG--GEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHH-HHHHHHHH
T ss_pred HHHHHHHcCCCcC--eEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchh-HHHHHHHH
Confidence 9999999999765 79999999999999998873 1 3674 444 3456766 33444566
Q ss_pred HHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCC----------cE
Q 006746 235 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEND----------WH 303 (632)
Q Consensus 235 a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g----------~~ 303 (632)
++..|++++.+++++.++.+++++|+++|+++ ++++++++.+|+||..+|++ |.++|+++| ++
T Consensus 144 ~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 217 (432)
T 3a9z_A 144 VEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVL 217 (432)
T ss_dssp HHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCE
T ss_pred HHhcCcEEEEEecCcccCCcCHHHHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceE
Confidence 67789999999987446789999999888653 58999999999999999999 999999999 99
Q ss_pred EEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCC-ccccCCCCCCCceeecccccccccccccC
Q 006746 304 ILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKST-VPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 304 vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~-~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
+++|+++..+. .++++..+++|++++|+||++| |. +|+++++++. ...+.+.++||...
T Consensus 218 livDea~~~~~--~~~~~~~~~~d~~~~s~~K~~g--~~-~G~~~~~~~~~~~~~~~~~~~~~~~--------------- 277 (432)
T 3a9z_A 218 VHTDAAQALGK--RRVDVEDLGVDFLTIVGHKFYG--PR-IGALYVRGVGKLTPLYPMLFGGGQE--------------- 277 (432)
T ss_dssp EEEECTTTTTT--SCCCHHHHCCSEEEEEGGGTTC--CS-CEEEEETTBTTTBCCCCSCCSSCGG---------------
T ss_pred EEEEchhhhCC--cccChhhcCCCEEEEehhHhcC--Cc-ceEEEEccccccCCcCceeecCCcc---------------
Confidence 99999998876 4677766789999999999998 86 9999999876 44455544432100
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
..+ +.|+++.+.+.++. ++|+++.+ +
T Consensus 278 ----------~~~-------------------~~~~~~~~~~~a~~------------------------aal~~~~~-~ 303 (432)
T 3a9z_A 278 ----------RNF-------------------RPGTENTPMIAGLG------------------------KAADLVSE-N 303 (432)
T ss_dssp ----------GGT-------------------SCSCCCHHHHHHHH------------------------HHHHHHHH-H
T ss_pred ----------ccc-------------------cCCCcCHHHHHHHH------------------------HHHHHHHh-h
Confidence 000 13445555566665 78887765 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC-CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccC
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR-FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYG 541 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~-~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G 541 (632)
++.+.++.+.+.++|.+.|.++. | ..+.+++|... ...+.+++|.+.+.. ++...+.+.+ .+|.++.|
T Consensus 304 ~~~~~~~~~~~~~~l~~~L~~~~-----g-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l--~~i~~~~G 372 (432)
T 3a9z_A 304 CETYEAHMRDIRDYLEERLEAEF-----G-KRIHLNSRFPGVERLPNTCNFSIQGSQ---LRGYMVLAQC--QTLLASVG 372 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----G-GGEEESSCCTTCCBCTTEEEEEECSTT---CCHHHHHHHC--SSEECBSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-----C-CcEEEeCCCCcccCCCCEEEEEeCCCC---CcHHHHHHHh--cCeEEecc
Confidence 89999999999999999999851 2 23556676321 223568999987621 2344443322 48999999
Q ss_pred ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 542 SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 542 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..|.++.+... ...+..... . .....++||+|++.++|.|||+++++.|++++.
T Consensus 373 ~~~~~~~~~~~----~~~l~~~g~--~----------~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 373 ASCHSDHEDRP----SPVLLSCGI--P----------VDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp CGGGGGGTTSC----CHHHHHTTC--C----------HHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCc----cHHHHhcCC--C----------ccccCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 98876421100 011111000 0 001236999999999999999999999999875
No 12
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=2.1e-31 Score=288.06 Aligned_cols=372 Identities=17% Similarity=0.138 Sum_probs=276.2
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc-ccccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s-~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
++.+|||+++.++.|+.+++++.+.+.... ..+|+++ .+.++....+.++++|+.+++++|+
T Consensus 21 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~ 83 (423)
T 3lvm_A 21 KLPIYLDYSATTPVDPRVAEKMMQFMTMDG-----------------TFGNPASRSHRFGWQAEEAVDIARNQIADLVGA 83 (423)
T ss_dssp CSSEECBTTTCCCCCHHHHHHHTTSSSTTS-----------------CCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEeecCCCcCCCCHHHHHHHHHHHhhcc-----------------cccCCCccccchhHHHHHHHHHHHHHHHHHcCC
Confidence 679999999999999999999887654110 0134443 2223333457888999999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCC---CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYP---FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~---~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
+++ .|+||+|+|+|+.+++.++. -++||+|++. ..|++ ....+ ..++..|++++.++.+ +++.+|+++|++
T Consensus 84 ~~~--~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~-~~~~~-~~~~~~g~~~~~v~~~-~~~~~d~~~l~~ 158 (423)
T 3lvm_A 84 DPR--EIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKA-VLDTC-RQLEREGFEVTYLAPQ-RNGIIDLKELEA 158 (423)
T ss_dssp CGG--GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHH-HHHHH-HHHHHTTCEEEEECCC-TTSCCCHHHHHH
T ss_pred CCC--eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchH-HHHHH-HHHHHcCCEEEEeccC-CCCccCHHHHHH
Confidence 865 79999999999999998873 1369997755 56765 33332 3336789999999998 577889999999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCC
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGEN 340 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~ 340 (632)
+|+++ ++++++++.+|+||..+|++ |.++|+++|+++++|.++..+. .++++..+++|++++|+||++|
T Consensus 159 ~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~--~~~~~~~~~~di~~~s~sK~~g-- 228 (423)
T 3lvm_A 159 AMRDD------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGK--LPIDLSQLKVDLMSFSGHKIYG-- 228 (423)
T ss_dssp HCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTT--SCCCTTTSCCSEEEEESTTTTS--
T ss_pred hcCCC------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCC--CCcChhhcCCCEEEechHHhcC--
Confidence 98754 58999999999999999999 9999999999999999998876 4788888899999999999988
Q ss_pred CCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcc
Q 006746 341 PSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLE 420 (632)
Q Consensus 341 P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~ 420 (632)
|.|+|+++++++....+.+...+|... . .+ ..++++
T Consensus 229 ~~g~G~~~~~~~~~~~~~~~~~~~~~~------------~-------------~~-------------------~~~~~~ 264 (423)
T 3lvm_A 229 PKGIGALYVRRKPRVRIEAQMHGGGHE------------R-------------GM-------------------RSGTLP 264 (423)
T ss_dssp CSSCEEEEECBTTBCCCCCSSCSSCTT------------T-------------TT-------------------CCSCCC
T ss_pred CCCeEEEEEeccccCCCCccccCCccc------------c-------------cc-------------------cCCCCC
Confidence 779999999998877776654431100 0 00 123444
Q ss_pred cchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECC
Q 006746 421 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGP 500 (632)
Q Consensus 421 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp 500 (632)
.+.+.++. .+++.+... ++.+.++.+.+.++|.+.|.++ |.++++++
T Consensus 265 ~~~~~a~~------------------------~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~ 311 (423)
T 3lvm_A 265 VHQIVGMG------------------------EAYRIAKEE-MATEMERLRGLRNRLWNGIKDI--------EEVYLNGD 311 (423)
T ss_dssp HHHHHHHH------------------------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTS--------TTEEEESC
T ss_pred HHHHHHHH------------------------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcC--------CCEEEeCC
Confidence 55555554 777777654 8999999999999999999876 67899887
Q ss_pred CCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCC
Q 006746 501 KIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 580 (632)
Q Consensus 501 ~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 580 (632)
.. ...++++.|.+.+ ++...+.+.+.+ |.++.|.+|.++..... .++.... .. ..
T Consensus 312 ~~-~~~~~~~~~~~~~-----~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~-----~~~~~~g--~~----------~~ 366 (423)
T 3lvm_A 312 LE-HGAPNILNVSFNY-----VEGESLIMALKD--LAVSSGSACTSASLEPS-----YVLRALG--LN----------DE 366 (423)
T ss_dssp ST-TBCTTEEEEEETT-----SCHHHHHHHTTT--EECBCCCC-----CCCC-----HHHHHHT--CC----------HH
T ss_pred cc-ccCCCeEEEEeCC-----CCHHHHHHHHhh--heeccCccccCCCcccc-----HHHHHhC--CC----------cc
Confidence 53 2346788898855 567777776655 99999999987432110 0010000 00 01
Q ss_pred CCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 581 LGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 581 ~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.||+|++..+|.|||+++++.|+++++.
T Consensus 367 ~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~ 398 (423)
T 3lvm_A 367 LAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp HHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12469999999999999999999999998865
No 13
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=100.00 E-value=7e-32 Score=291.13 Aligned_cols=394 Identities=12% Similarity=0.158 Sum_probs=272.5
Q ss_pred HHHHHHHhCCCCCCchhHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccc
Q 006746 76 SLTEFTKAYPQYFDTYQIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKT 155 (632)
Q Consensus 76 a~~~F~~~~p~y~~~~~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~ 155 (632)
.|+..+... ..++++|+ +||.+ ++.+|||+++.++.|..+++++.+.+... |
T Consensus 5 ~~~~~~~~~------~~~~~~r~-~f~~~--~~~~yld~~~~~~~~~~v~~a~~~~l~~~--------~----------- 56 (416)
T 1qz9_A 5 NDCLALDAQ------DSLAPLRQ-QFALP--EGVIYLDGNSLGARPVAALARAQAVIAEE--------W----------- 56 (416)
T ss_dssp HHHHHHHHT------CTTGGGGG-GBCCC--TTCEECCTTTSCCCBTTHHHHHHHHHHTC--------C-----------
T ss_pred hHHHhcccc------chhHHHHH-hCCCC--CCeEeecCCCcCCCcHHHHHHHHHHHHHH--------H-----------
Confidence 355666644 35667886 79977 78999999999999999999877644210 0
Q ss_pred cccccccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC-CC----CCCCe-EEEec-cccchhh
Q 006746 156 GNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY-PF----MSVKN-LLTVY-DYESEAV 228 (632)
Q Consensus 156 ~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl-~~----~~gd~-ilt~~-d~~s~~v 228 (632)
+++.....+.....+.++++|+.+++++|++++ .|+||+|+|+++.+++.++ .+ ++||+ |++.. .|++ ..
T Consensus 57 ~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~--~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~-~~ 133 (416)
T 1qz9_A 57 GNGLIRSWNSAGWRDLSERLGNRLATLIGARDG--EVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPT-DL 133 (416)
T ss_dssp CCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTT--SEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHH-HH
T ss_pred hccCccccchhhHHHHHHHHHHHHHHHcCCCcc--cEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCc-hH
Confidence 222111011111236778999999999999765 6999999999999888776 45 78987 55544 5554 23
Q ss_pred HHHHHHHHhc--CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEE
Q 006746 229 EAMIRTSEKR--GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHIL 305 (632)
Q Consensus 229 ~~~~~~a~~~--G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vl 305 (632)
..+..+++.. |++++.++. +++|+++|++ ++++|++++.+|+||...|++ |.++|+++|++++
T Consensus 134 ~~~~~~~~~~~~g~~~~~v~~--------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 199 (416)
T 1qz9_A 134 YIAEGLADMLQQGYTLRLVDS--------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAI 199 (416)
T ss_dssp HHHHHHHHHHCSSCEEEEESS--------GGGHHHHCST------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhcCCceEEEeCc--------HHHHHHHhCC------CceEEEEeccccCcccccCHHHHHHHHHHcCCEEE
Confidence 3333444445 999988875 4677777754 358999999999999999999 9999999999999
Q ss_pred EeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCce-EEEEEeCCCccccCCCCCC--CceeecccccccccccccC
Q 006746 306 IDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGF-GCLFVKKSTVPILVDNTSS--GMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 306 vDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~-G~L~Vr~~~~~~L~~~~~g--G~v~~~~~~~~~~~~~~~~ 382 (632)
+|+++..|. .++++..+++|++++|+||+++. +.|+ |+++++++.++.+.+...| |... .|....
T Consensus 200 ~D~a~~~g~--~~~~~~~~~~d~~~~s~~K~l~~-g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~-------~~~~~~-- 267 (416)
T 1qz9_A 200 WDLAHSAGA--VPVDLHQAGADYAIGCTYKYLNG-GPGSQAFVWVSPQLCDLVPQPLSGWFGHSR-------QFAMEP-- 267 (416)
T ss_dssp EECTTTTTT--SCCCHHHHTCSEEEECSSSTTCC-CTTCCCEEEECTTTTTTSCCSCCCGGGBCT-------TSCCCS--
T ss_pred EEccccccC--cCCChhhcCCCEEEecCcccCCC-CCCCeEEEEECHHHHhccCCCccccCcccc-------ccCCCC--
Confidence 999999876 46677667899999999997543 4466 9999999988777764433 2210 000000
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
.+........ .+.|+++++.+.++. .+|+.+.+.|
T Consensus 268 --~~~~~~~~~~-------------------~~~~~~~~~~~~a~~------------------------~al~~~~~~~ 302 (416)
T 1qz9_A 268 --RYEPSNGIAR-------------------YLCGTQPITSLAMVE------------------------CGLDVFAQTD 302 (416)
T ss_dssp --SCCBCSSGGG-------------------GCCSCCCHHHHHHHH------------------------HHHHHHTTSC
T ss_pred --ccCCCcchHH-------------------hcCCCCCHHHHHHHH------------------------HHHHHHHhcC
Confidence 0000000000 124566666677665 7888887678
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCC--cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEcc
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNA--LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSY 540 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p--~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~ 540 (632)
++.+.++.+.+.++|.+.|.++ .| .+++++|.....+++++.|.+.+ ...+.+.+.++||.++.
T Consensus 303 ~~~~~~~~~~~~~~l~~~L~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~gi~~~~ 368 (416)
T 1qz9_A 303 MASLRRKSLALTDLFIELVEQR-------CAAHELTLVTPREHAKRGSHVSFEHPE-------GYAVIQALIDRGVIGDY 368 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-------HTTSCCEECSCSSGGGBCSEEEEECTT-------HHHHHHHHHTTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-------ccCCCeEEeCCCCHHHcCCEEEEecCC-------HHHHHHHHHhCCcEecc
Confidence 9999999999999999999885 13 57787774322357888887653 34555555567887531
Q ss_pred CccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccC-CCCCHHHHHHHHHHHHHhhhhccccccc
Q 006746 541 GSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLG-YLANFEDVYRLWAFVAQFLDADFVEKAR 619 (632)
Q Consensus 541 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg-~~~t~eDV~rlv~~l~~~l~~~f~~~~~ 619 (632)
...+.||+|++ +++|.+||+++++.|++++.. ..
T Consensus 369 ----------------------------------------~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~-----~~ 403 (416)
T 1qz9_A 369 ----------------------------------------REPRIMRFGFTPLYTTFTEVWDAVQILGEILDR-----KT 403 (416)
T ss_dssp ----------------------------------------ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH-----TT
T ss_pred ----------------------------------------CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc-----cc
Confidence 12358999998 699999999999999998654 58
Q ss_pred ceeeecccccc
Q 006746 620 WRYTALDQKTI 630 (632)
Q Consensus 620 ~~~~~~~~~~~ 630 (632)
|+.-..|+++.
T Consensus 404 ~~~~~~~~~~~ 414 (416)
T 1qz9_A 404 WAQAQFQVRHS 414 (416)
T ss_dssp TC---------
T ss_pred cccccccccCC
Confidence 99988888864
No 14
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=1.3e-32 Score=295.00 Aligned_cols=368 Identities=15% Similarity=0.071 Sum_probs=253.1
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
++.+|||+++.++.|+.+++++.+.+.. ..+|+++.+.++....+.++++|+.+++++|++
T Consensus 19 ~~~iyld~~~~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~ 79 (400)
T 3vax_A 19 SHMTYLDAAATTRVDQRVADIVLHWMTA-------------------EFGNAGSRHEYGIRAKRGVERAREYLASTVSAE 79 (400)
T ss_dssp ---CCCCCCCCSSSCHHHHHHHHHHHHH-------------------HHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHHh-------------------ccCCCcccchhHHHHHHHHHHHHHHHHHHcCCC
Confidence 6789999999999999999997764421 113444433333334577889999999999998
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCC-C--CCCC-eEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYP-F--MSVK-NLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~-~--~~gd-~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
++ .|+||+|+|+|+.+++.++- + ++|| +|++. .+|++ ....+. ..++.|++++.++++ +++.+|+++|++
T Consensus 80 ~~--~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~-~~~~~~-~~~~~g~~~~~v~~~-~~~~~d~~~l~~ 154 (400)
T 3vax_A 80 PD--ELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKA-VLEPLE-HLAGRGFEVDFLTPG-PSGRISVEGVME 154 (400)
T ss_dssp GG--GEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHH-HHHHHH-HHHTTTCEEEEECCC-TTCCCCHHHHHT
T ss_pred CC--cEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHh-HHHHHH-HHHhcCCeEEEEccC-CCCCcCHHHHHH
Confidence 65 79999999999999999982 1 6899 87754 56775 333323 345689999999998 577899999998
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCC
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGEN 340 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~ 340 (632)
+|+++ ++++++++.+|+||..+|++ |.++|+++|+++++|+++..+. .++++..+ +|++++|+||++|
T Consensus 155 ~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~-~d~~~~s~~K~~g-- 223 (400)
T 3vax_A 155 RLRPD------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGK--VPGDLTTP-IDMISISGHKIGA-- 223 (400)
T ss_dssp TCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTT--SGGGGGSC-CSEEEEETGGGTS--
T ss_pred hcCCC------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCC--CCcChhhc-CcEEEEeHHHhCC--
Confidence 88653 58999999999999999999 9999999999999999999886 47777777 9999999999888
Q ss_pred CCceEEEE-EeCCCcc----ccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhh
Q 006746 341 PSGFGCLF-VKKSTVP----ILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQ 415 (632)
Q Consensus 341 P~G~G~L~-Vr~~~~~----~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~ 415 (632)
|.|+|+++ ++++.+. .+.+...++... .. .+
T Consensus 224 ~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~-------------------~~ 259 (400)
T 3vax_A 224 PKGVGALVTRRREEMDDERVPLEPIMFGGGQE-------------------------RK-------------------LR 259 (400)
T ss_dssp CSSCEEEEECBCSSSTTCBCCCCCSSCSSCTG-------------------------GG-------------------TS
T ss_pred CCceEEEEEecchhccccccccCceecCCCce-------------------------ee-------------------ee
Confidence 88999999 9884332 233322221100 00 01
Q ss_pred cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE
Q 006746 416 SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV 495 (632)
Q Consensus 416 ~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v 495 (632)
.|+++++.+.++. .+++.+.+ +++.+.++.+.+.+++.+.|. + +.+
T Consensus 260 ~~~~~~~~~~a~~------------------------~al~~~~~-~~~~~~~~~~~~~~~l~~~L~-~--------~~~ 305 (400)
T 3vax_A 260 PGTLPVPLIMGLA------------------------EAAKIFEA-EHAQWQVAAQDLRSRLLAGLA-S--------TSF 305 (400)
T ss_dssp CSCCCHHHHHHHH------------------------HHHHHHHH-SHHHHHHHHHHHHHHHHHHHT-T--------TTC
T ss_pred cCCCCHHHHHHHH------------------------HHHHHHHh-hHHHHHHHHHHHHHHHHHhhC-C--------CCE
Confidence 3445555566665 78887765 789999999999999999998 5 557
Q ss_pred EEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccc
Q 006746 496 KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNR 575 (632)
Q Consensus 496 ~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 575 (632)
+++++.. ...++++.|.+.+ ++...+.+.+. +||.++.|..|........ .++.... . .
T Consensus 306 ~~~~~~~-~~~~~~~~~~~~~-----~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~-----~~~~~~g--~----~--- 364 (400)
T 3vax_A 306 QVNGDQD-HVVPHILNLSFED-----VDAEAFLVTLK-DLVAVATGSASTSASFTPS-----HVLRAMG--L----P--- 364 (400)
T ss_dssp EECSCTT-SBCTTEEEEECTT-----CCHHHHHHHHH-HHHHHTTTTEEEEEEECCH-----HHHHTTT--C----C---
T ss_pred EEeCCcc-cCCCCEEEEEeCC-----CCHHHHHHHHh-cCcEEEecccccCCCCCcc-----HHHHHcC--C----C---
Confidence 8887753 2345688898875 56677777677 8999999988876421110 0010000 0 0
Q ss_pred cccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhh
Q 006746 576 KDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 576 ~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~ 611 (632)
+....+.||+|+ +.++|.|||+++++.|+++++
T Consensus 365 ---~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 365 ---EEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp ---HHHHTSEEEEEEEEC-------------------
T ss_pred ---ccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 001147999999 999999999999999998865
No 15
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=3.2e-31 Score=283.41 Aligned_cols=363 Identities=10% Similarity=0.006 Sum_probs=268.9
Q ss_pred hccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHH
Q 006746 100 EYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRI 179 (632)
Q Consensus 100 ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~i 179 (632)
+||.+ .+.+|||+++.++.|+.+++++.+.+.. + ++......+++.|+.+
T Consensus 2 ~fp~~--~~~~yl~~~~~~~~~~~v~~a~~~~~~~--------------------------~--~~~~~~~~~~~l~~~l 51 (392)
T 2z9v_A 2 RYPEH--ADPVITLTAGPVNAYPEVLRGLGRTVLY--------------------------D--YDPAFQLLYEKVVDKA 51 (392)
T ss_dssp CCCTT--SCCSEECSSSCCCCCHHHHHHTTSCCCC--------------------------T--TSHHHHHHHHHHHHHH
T ss_pred CcccC--CCcceeecCCCcCCCHHHHHHHhccccc--------------------------c--ccHHHHHHHHHHHHHH
Confidence 59999 6789999999999999999997654321 0 0111246778999999
Q ss_pred HHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHH
Q 006746 180 MDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEK 258 (632)
Q Consensus 180 a~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~ 258 (632)
++++|++++ .|+||+|+|+|+.+++.++ +++||+|++ ...|++. .+ ...++..|++++.++++ +++.+++++
T Consensus 52 a~~~g~~~~--~v~~t~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~ 124 (392)
T 2z9v_A 52 QKAMRLSNK--PVILHGEPVLGLEAAAASL-ISPDDVVLNLASGVYGK--GF-GYWAKRYSPHLLEIEVP-YNEAIDPQA 124 (392)
T ss_dssp HHHTTCSSC--CEEESSCTHHHHHHHHHHH-CCTTCCEEEEESSHHHH--HH-HHHHHHHCSCEEEEECC-TTSCCCHHH
T ss_pred HHHhCCCCC--EEEEeCCchHHHHHHHHHh-cCCCCEEEEecCCcccH--HH-HHHHHHcCCceEEeeCC-CCCCCCHHH
Confidence 999999754 7999999999999999998 789999765 4567752 33 45567789999999997 456799999
Q ss_pred HHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccc-
Q 006746 259 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQI- 336 (632)
Q Consensus 259 l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~- 336 (632)
|+++|.+. ++++++++++.+|+||..+|++ |.++|+++|+++++|+++..|. .++++..+++|++++|+||+
T Consensus 125 l~~~l~~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~--~~~~~~~~~~d~~~~s~sK~~ 198 (392)
T 2z9v_A 125 VADMLKAH----PEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGG--MKTHPEDCKADIYVTGPNKCL 198 (392)
T ss_dssp HHHHHHHC----TTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTT--BSCCGGGGTCSEEEECSSSTT
T ss_pred HHHHHhcC----CCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCC--cccccccccceEEEecCcccc
Confidence 99999641 1358999999999999999999 9999999999999999998876 46777778899999999994
Q ss_pred cCCCCCceEEEEEeCCCccccCCCCCC-CceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhh
Q 006746 337 FGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQ 415 (632)
Q Consensus 337 ~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~ 415 (632)
+| |.|+|+++++++.++.+++...| |.. .......+. .+. ..+ ..
T Consensus 199 ~~--~~g~G~l~~~~~~~~~l~~~~~g~~~~--~~~~~~~~~-------~~~-----------~~~------------~~ 244 (392)
T 2z9v_A 199 GA--PPGLTMMGVSERAWAKMKANPLAPRAS--MLSIVDWEN-------AWS-----------RDK------------PF 244 (392)
T ss_dssp CC--CSCCEEEEECHHHHHHHHTCTTSCCSS--TTCSGGGTT-------TTS-----------TTS------------CC
T ss_pred cC--CCceeEEEECHHHHHHhhhccCCCCce--eccHHHHHh-------hhc-----------ccC------------CC
Confidence 55 78999999999877666542211 100 000000000 000 000 02
Q ss_pred cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE
Q 006746 416 SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV 495 (632)
Q Consensus 416 ~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v 495 (632)
.|+++++.+.++. .+|+.+.+.|++.+.++.+.+.+++++.|.++ | +
T Consensus 245 ~~~~~~~~~~a~~------------------------~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~------g---~ 291 (392)
T 2z9v_A 245 PFTPSVSEINGLD------------------------VALDLYLNEGPEAVWARHALTAKAMRAGVTAM------G---L 291 (392)
T ss_dssp SSCCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT------T---C
T ss_pred CCCCCHHHHHHHH------------------------HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc------C---C
Confidence 3556666666665 78998888899999999999999999999987 3 3
Q ss_pred EEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHh-CCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccc
Q 006746 496 KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADR-ENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNN 574 (632)
Q Consensus 496 ~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~-~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 574 (632)
+++.|......+.++.|.+.+ | ++...+.+.+.+ +||.++.|..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~--~--~~~~~l~~~L~~~~gi~v~~g~~~------------------------------ 337 (392)
T 2z9v_A 292 SVWAASDSIASPTTTAVRTPD--G--VDEKALRQAARARYGVVFSSGRGE------------------------------ 337 (392)
T ss_dssp CBSSSSGGGBCTTEEEEECCT--T--CCHHHHHHHHHHHHCEECEECCGG------------------------------
T ss_pred eeccCCccccCCceEEEECCC--C--CCHHHHHHHHHhcCCEEEecCCCC------------------------------
Confidence 455532112357788888752 1 455666554444 59999877421
Q ss_pred ccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 575 RKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 575 ~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.||+|+ ++++|.+||+++++.|+++++.
T Consensus 338 ------~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 338 ------TLGKLTRIGHMGPTAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp ------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ------CCCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence 0235899996 5599999999999999998764
No 16
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=6.3e-31 Score=279.30 Aligned_cols=366 Identities=18% Similarity=0.177 Sum_probs=259.5
Q ss_pred eEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCC
Q 006746 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEND 189 (632)
Q Consensus 110 vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~e 189 (632)
+|||+++.++.|+.+++++.+.+... .+|+++.+.++......+.+.|+.+++++|++++
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~- 62 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREK-------------------YGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS- 62 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTC-------------------CCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhc-------------------CCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-
Confidence 89999999999999999987654310 1233322222222356778999999999999865
Q ss_pred ccEEEeCCHHHHHHHHHhhCC---CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 190 YGMVFTANRTSAFKLLAESYP---FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 190 y~vvft~naT~al~lv~~sl~---~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
.|+||+|+|+|+.+++.++. +++||+|++. ..|++ .... ...++..|++++.++.+ +++.+++++|+++|++
T Consensus 63 -~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~ 138 (384)
T 1eg5_A 63 -EIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKA-VLET-MKYLSMKGFKVKYVPVD-SRGVVKLEELEKLVDE 138 (384)
T ss_dssp -GEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHH-HHHH-HHHHHHTTCEEEECCBC-TTSCBCHHHHHHHCCT
T ss_pred -eEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchH-HHHH-HHHHHhcCCEEEEEccC-CCCccCHHHHHHHhCC
Confidence 79999999999999999985 3789997765 46664 2222 33346689999999987 5677999999998865
Q ss_pred cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCC--cEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCC
Q 006746 266 KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEND--WHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPS 342 (632)
Q Consensus 266 ~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g--~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~ 342 (632)
+ ++++++++.+|+||..+|++ |.++|+++| +++++|.++..+. .++++..+++|++++|+||++| |.
T Consensus 139 ~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~--~~~~~~~~~~di~~~s~sK~~g--~~ 208 (384)
T 1eg5_A 139 D------TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGK--IPFSLEKLEVDYASFSAHKFHG--PK 208 (384)
T ss_dssp T------EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTT--SCCCCTTTCCSEEEEEGGGGTS--CT
T ss_pred C------CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCC--cccCchhcCCCEEEecHHHhcC--CC
Confidence 3 58999999999999999999 999999999 9999999988775 3667777789999999999999 77
Q ss_pred ceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccc
Q 006746 343 GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 422 (632)
Q Consensus 343 G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~ 422 (632)
|+|+++++++. .+.+.+.++.. .. .+ ..++.+.+
T Consensus 209 G~G~~~~~~~~--~~~~~~~~~~~------------~~-------------~~-------------------~~~~~~~~ 242 (384)
T 1eg5_A 209 GVGITYIRKGV--PIRPLIHGGGQ------------ER-------------GL-------------------RSGTQNVP 242 (384)
T ss_dssp TCEEEEECTTS--CCCCSBCSSCT------------TT-------------TT-------------------BCSCCCHH
T ss_pred ceEEEEEcCCC--ccccccccCcc------------cc-------------cc-------------------cCCCCChH
Confidence 89999999875 23332221000 00 00 02233444
Q ss_pred hhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCC
Q 006746 423 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI 502 (632)
Q Consensus 423 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~ 502 (632)
.+.++. .+|+...+ +++.+.++.+.+.+++.+.|.+. | +++++|..
T Consensus 243 ~~~a~~------------------------~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~~ 288 (384)
T 1eg5_A 243 GIVGAA------------------------RAMEIAVE-ELSEAAKHMEKLRSKLVSGLMNL------G---AHIITPLE 288 (384)
T ss_dssp HHHHHH------------------------HHHHHHHH-THHHHHHHHHHHHHHHHHHHHTT------T---CEECSCTT
T ss_pred HHHHHH------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHhCCC------C---eEEeCCcc
Confidence 444444 67777544 68899999999999999999874 3 56666532
Q ss_pred CCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCC
Q 006746 503 RFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLG 582 (632)
Q Consensus 503 ~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 582 (632)
...+.++.|.+.+ ++...+.+.+.++||.++.|..|........ .+++... .+ ....
T Consensus 289 -~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~-----~~~~~~g--~~----------~~~~ 345 (384)
T 1eg5_A 289 -ISLPNTLSVSFPN-----IRGSTLQNLLSGYGIYVSTSSACTSKDERLR-----HVLDAMG--VD----------RRIA 345 (384)
T ss_dssp -SBCTTEEEEECTT-----CCHHHHHHHHHHTTEECBC-----------------CHHHHTT--CC----------HHHH
T ss_pred -cCCCCEEEEEeCC-----CCHHHHHHHHhhCCeEEeccccccCCCCcch-----HHHHHcC--CC----------hhhc
Confidence 1245688888764 4666777777789999999987754321110 1111100 00 0012
Q ss_pred CcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 583 ITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 583 ~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.||+|++.++|.+||+++++.|+++++.
T Consensus 346 ~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 346 QGAIRISLCKYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp HHEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 369999999999999999999999999864
No 17
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.9e-30 Score=276.10 Aligned_cols=366 Identities=12% Similarity=0.106 Sum_probs=271.9
Q ss_pred HHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHH
Q 006746 95 QIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA 174 (632)
Q Consensus 95 ~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~ 174 (632)
++|+ +||.+ ++.+|||+.+.+..++.+++++.+.+.. .|+....+..++
T Consensus 9 ~~r~-~f~~~--~~~~~l~~~~~~~~~~~v~~a~~~~~~~----------------------------~~~~~~~~~~~~ 57 (386)
T 2dr1_A 9 AFKE-VYEMV--KPKYKLFTAGPVACFPEVLEIMKVQMFS----------------------------HRSKEYRKVHMD 57 (386)
T ss_dssp HHHH-HHHHH--SCCSEECCSSSCCCCHHHHHHTTSCCCC----------------------------TTSHHHHHHHHH
T ss_pred HHHH-HHhhc--CccceeecCCCcCCcHHHHHHHhccccc----------------------------ccCHHHHHHHHH
Confidence 5665 69988 5689999999999999999997653310 011112577889
Q ss_pred HHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccc
Q 006746 175 MKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLR 253 (632)
Q Consensus 175 ~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~ 253 (632)
+++.+++++|++ +...|+||+|+|+|+.+++.++ +++||+|++ ...|++. . +...++..|++++.++.+ +++.
T Consensus 58 ~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l-~~~gd~vl~~~~~~~~~--~-~~~~~~~~g~~~~~v~~~-~~~~ 131 (386)
T 2dr1_A 58 TVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNG-VSKGGKVLVTIIGAFGK--R-YKEVVESNGRKAVVLEYE-PGKA 131 (386)
T ss_dssp HHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHH-SCTTCEEEEEESSHHHH--H-HHHHHHHTTCEEEEEECC-TTCC
T ss_pred HHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHh-hcCCCeEEEEcCCchhH--H-HHHHHHHhCCceEEEecC-CCCC
Confidence 999999999997 2336999999999999999998 789999765 4566642 2 345667889999999997 5677
Q ss_pred cCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEc
Q 006746 254 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICS 332 (632)
Q Consensus 254 i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S 332 (632)
+++++|+++|.+. ++++++++++.+|+||...|++ |.++|+++|+++++|+++..+. .++++..+++|++++|
T Consensus 132 ~d~~~l~~~l~~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~di~~~s 205 (386)
T 2dr1_A 132 VKPEDLDDALRKN----PDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGG--ADIKFDKWGLDVVFSS 205 (386)
T ss_dssp CCHHHHHHHHHHC----TTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTT--BCCCTTTTTCSEEEEE
T ss_pred CCHHHHHHHHhcC----CCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccC--ccccccccCCcEEEEe
Confidence 9999999999641 1358999999999999999999 9999999999999999998876 3567777889999999
Q ss_pred cccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh-ccccCCCccchh
Q 006746 333 FYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV-AATNTFSGPMSI 411 (632)
Q Consensus 333 ~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e-~gt~~f~~~~~~ 411 (632)
+||++|. |.|+|+++++++.++.+.+....|. ++ + +. ....... .+.
T Consensus 206 ~sK~~~~-~~g~G~~~~~~~~~~~~~~~~~~~~---------~~--~------~~-----~~~~~~~~~~~--------- 253 (386)
T 2dr1_A 206 SQKAFGV-PPGLAIGAFSERFLEIAEKMPERGW---------YF--D------IP-----LYVKYLKEKES--------- 253 (386)
T ss_dssp TTSTTCC-CSSCEEEEECHHHHHHHTTCTTCCS---------TT--C------HH-----HHHHHHHHHSS---------
T ss_pred ccccccC-CCceEEEEECHHHHHHHhcCCCCce---------EE--e------HH-----HHHHhhccCCC---------
Confidence 9998875 7789999999887766654211110 00 0 00 0000000 000
Q ss_pred hhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCC
Q 006746 412 EMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTE 490 (632)
Q Consensus 412 ~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~ 490 (632)
..++++.+...++. .+|+.+.+. |++.+.++.+.+.+++.+.|.++
T Consensus 254 ---~~~~~~~~~~~a~~------------------------~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~------ 300 (386)
T 2dr1_A 254 ---TPSTPPMPQVFGIN------------------------VALRIIEKMGGKEKWLEMYEKRAKMVREGVREI------ 300 (386)
T ss_dssp ---CSSCCCHHHHHHHH------------------------HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred ---CCCCCCHHHHHHHH------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc------
Confidence 12344555555554 788888777 89999999999999999999987
Q ss_pred CCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccc
Q 006746 491 GNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSK 570 (632)
Q Consensus 491 G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 570 (632)
| ++++.|.. ...+.++.|.+.+ | ++...+.+.+.++||.++.|..+
T Consensus 301 g---~~~~~~~~-~~~~~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~~~~~-------------------------- 346 (386)
T 2dr1_A 301 G---LDILAEPG-HESPTITAVLTPP--G--IKGDEVYEAMRKRGFELAKGYGS-------------------------- 346 (386)
T ss_dssp T---CCBSSCTT-CBCSSEEEEECCT--T--CCHHHHHHHHHHTTEECEECCGG--------------------------
T ss_pred C---CeeCcCcc-ccCCceEEEEcCC--C--CCHHHHHHHHHHCCeEEecCccc--------------------------
Confidence 3 34455532 2357788888763 1 45666665555569999876410
Q ss_pred ccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 571 SDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 571 ~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.||+|++.++|.+||+++++.|+++++.
T Consensus 347 ----------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 347 ----------VKEKTFRIGHMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp ----------GTTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------cCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 02358999999999999999999999998764
No 18
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=3.5e-29 Score=265.88 Aligned_cols=356 Identities=13% Similarity=0.076 Sum_probs=263.8
Q ss_pred EeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCc
Q 006746 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDY 190 (632)
Q Consensus 111 yLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey 190 (632)
+|.+.|..++++.+++++.+.+... ++....+.++++|+.+++++|++++..
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~----------------------------~~~~~~~~~~~~~~~la~~~~~~~~~~ 55 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGF----------------------------TSKEFVEALAYSLKGLRYVMGASKNYQ 55 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCT----------------------------TSHHHHHHHHHHHHHHHHHHTCCTTSE
T ss_pred eeccCCCCCCCHHHHHHhhcccccc----------------------------ccHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 4566777788999999876533110 011124678899999999999986334
Q ss_pred cEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcC
Q 006746 191 GMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 269 (632)
Q Consensus 191 ~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~ 269 (632)
.|+||+|+|+|+. ++.++ +++||+|++ ...|++. . +...++..|++++.++++ +++.+|+++|+++|++.
T Consensus 56 ~v~~~~g~t~al~-~~~~~-~~~gd~vi~~~~~~~~~--~-~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~--- 126 (384)
T 3zrp_A 56 PLIIPGGGTSAME-SVTSL-LKPNDKILVVSNGVFGD--R-WEQIFKRYPVNVKVLRPS-PGDYVKPGEVEEEVRKS--- 126 (384)
T ss_dssp EEEEESCHHHHHH-HGGGG-CCTTCEEEEECSSHHHH--H-HHHHHTTSSCEEEEECCS-TTCCCCHHHHHHHHHHS---
T ss_pred EEEEcCCcHHHHH-HHHhh-cCCCCEEEEecCCcchH--H-HHHHHHHcCCcEEEecCC-CCCCCCHHHHHHHHHhC---
Confidence 7999999999999 88888 789999765 4567652 2 345667889999999998 56779999999999872
Q ss_pred CCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEE
Q 006746 270 KKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLF 348 (632)
Q Consensus 270 ~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~ 348 (632)
+++++++++.+|+||..+|++ |.++|+++|+++++|+++..+. .++++..+++|++++|+||+++. |.|+|+++
T Consensus 127 --~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~-~~g~g~~~ 201 (384)
T 3zrp_A 127 --EYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGA--EEVKAEEWNVDVYLTASQKALGS-AAGLGLLL 201 (384)
T ss_dssp --CEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTT--SCCCTTTTTCSEEEEETTSTTCC-CSSEEEEE
T ss_pred --CCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccC--ccccccccCCCEEEecCcccccC-CCceEEEE
Confidence 258999999999999999999 9999999999999999999887 57888888999999999996643 78999999
Q ss_pred EeCCCcccc-CCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHh
Q 006746 349 VKKSTVPIL-VDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEV 427 (632)
Q Consensus 349 Vr~~~~~~L-~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l 427 (632)
++++.++.+ ++....+ ++.... .+. .....++.|.. ...|+++++.+.++
T Consensus 202 ~~~~~~~~~~~~~~~~~----------~~~~~~----~~~-----~~~~~~~~~~~----------~~~g~~~~~~~~a~ 252 (384)
T 3zrp_A 202 LSPKALSILDSQNSIAG----------YYLDLR----NWL-----PVMRGAEEGKA----------AYFATPPVHVILQL 252 (384)
T ss_dssp ECHHHHHHHHHCCCSCC----------STTCHH----HHH-----HHHHHHHTTCC----------CCSSCCCHHHHHHH
T ss_pred ECHHHHHHhcCCCCCCc----------ccccHH----HHH-----HHHHhhcccCC----------CcCCCCCHHHHHHH
Confidence 999887766 4321100 010000 000 00000111000 01246667777777
Q ss_pred hhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCC
Q 006746 428 RRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRG 507 (632)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg 507 (632)
. .+++++...|++.+.++.+.+.+++.+.|.++ | ++++.+......+
T Consensus 253 ~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~~~~~~~ 299 (384)
T 3zrp_A 253 A------------------------EAFRLIEKEGIENRIKRHTMVASAIRAGLEAL------G---LEIVARRPESYSN 299 (384)
T ss_dssp H------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT------T---CCBSCSSGGGBCS
T ss_pred H------------------------HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC------C---CeEccCcccccCc
Confidence 5 88998888899999999999999999999987 3 3455553222346
Q ss_pred cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEE
Q 006746 508 PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVT 587 (632)
Q Consensus 508 ~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VR 587 (632)
.++.|.+.+ ++...+.+.+.++||.++.|.+|. .+.||
T Consensus 300 ~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~-------------------------------------~~~iR 337 (384)
T 3zrp_A 300 TVTGVILKV-----ADPQKVLAGTVNEGVEFAPGVHPA-------------------------------------FKYFR 337 (384)
T ss_dssp SEEEEECSS-----SCHHHHHHHHHTTTCCCEECCCTT-------------------------------------CCEEE
T ss_pred cEEEEECCC-----CCHHHHHHHHHHCCEEEecCCCCC-------------------------------------cCEEE
Confidence 777888775 466777766666799998764211 16999
Q ss_pred EccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 588 ASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 588 vSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+|++.++|.+||+++++.|+++++.
T Consensus 338 i~~~~~~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 338 IGHMGWVTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EeccccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998875
No 19
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.97 E-value=4.5e-29 Score=266.78 Aligned_cols=371 Identities=11% Similarity=0.048 Sum_probs=269.1
Q ss_pred HHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHH
Q 006746 94 DQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLES 173 (632)
Q Consensus 94 d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~ 173 (632)
+..|+ .||.|. ++.+|+|+.|....|+.+++++.+.+.. + |+......++
T Consensus 6 ~~~~~-~~~~~~-~~~~~~~~~g~~~~~~~v~~a~~~~~~~--------------------------~--~~~~~~~~~~ 55 (393)
T 2huf_A 6 TPPAV-LREPLV-TPNKLLMGPGPSNAPQRVLDAMSRPILG--------------------------H--LHPETLKIMD 55 (393)
T ss_dssp CCCGG-GGSCCC-CCCCEECSSSCCCCCHHHHHHTTSCCCC--------------------------T--TSHHHHHHHH
T ss_pred cchhh-hhcccC-CCCeEEecCCCCCCCHHHHHHHHhhhcc--------------------------C--CCHHHHHHHH
Confidence 33444 599886 6789999999999999999997653311 0 0001246778
Q ss_pred HHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCcc
Q 006746 174 AMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRL 252 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~ 252 (632)
++|+.+++++|++++ +.|+||+|+|+|+.+++.++ +++||+|++ ...|++. .+ ...++..|++++.++++ +++
T Consensus 56 ~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~~-~~~ 129 (393)
T 2huf_A 56 DIKEGVRYLFQTNNI-ATFCLSASGHGGMEATLCNL-LEDGDVILIGHTGHWGD--RS-ADMATRYGADVRVVKSK-VGQ 129 (393)
T ss_dssp HHHHHHHHHHTCCCS-EEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHHH--HH-HHHHHHTTCEEEEEECC-TTC
T ss_pred HHHHHHHHHhCCCCC-cEEEEcCcHHHHHHHHHHHH-hCCCCEEEEECCCcchH--HH-HHHHHHcCCeeEEEeCC-CCC
Confidence 999999999999753 37999999999999999998 789999765 4577752 33 44567789999999987 456
Q ss_pred ccCHHHHHHHHHh-cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEE
Q 006746 253 RINSEKLRKMVVS-KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLI 330 (632)
Q Consensus 253 ~i~~~~l~~~i~~-~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~ 330 (632)
.+++++|+++|++ + +++|++++.+|+||..+|++ |.++|+++|+++++|+++..+. .++++..+++|+++
T Consensus 130 ~~d~~~l~~~i~~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~ 201 (393)
T 2huf_A 130 SLSLDEIRDALLIHK------PSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGG--APMFMDRWEIDAMY 201 (393)
T ss_dssp CCCHHHHHHHHHHHC------CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTT--BCCCTTTTTCSEEE
T ss_pred CCCHHHHHHHHhccC------CcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCC--CCcchhhcCccEEE
Confidence 7999999999986 4 48999999999999999999 9999999999999999998876 46777778899999
Q ss_pred Eccccc-cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccc
Q 006746 331 CSFYQI-FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPM 409 (632)
Q Consensus 331 ~S~hK~-~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~ 409 (632)
+|+||+ +| |.|+|+++++++.++.+.+.... . .. |.... ........+... .
T Consensus 202 ~s~sK~l~g--~~G~G~~~~~~~~~~~~~~~~~~-~-------~~-~~~~~------------~~~~~~~~~~~~-~--- 254 (393)
T 2huf_A 202 TGSQKVLGA--PPGITPVSFSHRAVERYKRRNTK-V-------KV-YYWDM------------SLVGDYWGCFGR-P--- 254 (393)
T ss_dssp CCSSSTTCC--CSSCEEEEECHHHHHHHHTCSSC-C-------SC-GGGCH------------HHHHHHTTCSSS-C---
T ss_pred ECCCccccc--CCCeEEEEECHHHHHHHhhcCCC-C-------ce-EEEch------------HHHHhhhccccc-c---
Confidence 999996 55 78999999998877655432100 0 00 00000 000000000000 0
Q ss_pred hhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 006746 410 SIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNT 489 (632)
Q Consensus 410 ~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~ 489 (632)
..+.|+++++.+.++. .+|+.+.+.|++.+.++.+.+.+++.+.|.++
T Consensus 255 ---~~~~~~~~~~~~~a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----- 302 (393)
T 2huf_A 255 ---RIYHHTISSTLLYGLR------------------------EAIAMACEEGLPALIARHEDCAKRLYRGLQDA----- 302 (393)
T ss_dssp ---CCCSCCCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred ---CCCCCCCCHHHHHHHH------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 0023556666666665 78888877789999999999999999999987
Q ss_pred CCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccc
Q 006746 490 EGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAK 568 (632)
Q Consensus 490 ~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~ 568 (632)
| +++++|.. ...+.++.|.+.+ | ++...+.+ |++++||.++.|..|.
T Consensus 303 -g---~~~~~~~~-~~~~~~~~~~~~~--~--~~~~~~~~~L~~~~gi~v~~g~~~~----------------------- 350 (393)
T 2huf_A 303 -G---FELYADPK-DRLSTVTTIKVPQ--G--VDWLKAAQYAMKTYLVEISGGLGPT----------------------- 350 (393)
T ss_dssp -T---CCBSSCGG-GBCTTEEEEECCT--T--CCHHHHHHHHHHHHCEECBCCCGGG-----------------------
T ss_pred -C---CeeccCcc-ccCCcEEEEEcCC--C--CCHHHHHHHHHHhCCEEEecCcccc-----------------------
Confidence 3 34455531 1124488888752 1 45555654 5566799998774220
Q ss_pred ccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 569 SKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||+|+ ++.++.+||+++++.|+++++.
T Consensus 351 -------------~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 351 -------------AGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp -------------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred -------------cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 235899999 5556899999999999998764
No 20
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.97 E-value=6.4e-30 Score=269.38 Aligned_cols=354 Identities=11% Similarity=0.080 Sum_probs=260.0
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
..|+.+.|-..+|..+++++.+.+.. + .+.. .. .+....+.++++|+.+++++|+++
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~-----~-------~~~~----~~------~~~~~~~~~~~~~~~la~~~g~~~- 60 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDE-----K-------IGVI----SH------RSKKFEEVYKTASDNLKTLLELPS- 60 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHT-----T-------TTTS----CT------TSHHHHHHHHHHHHHHHHHTTCCT-
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcC-----C-------ccCc----CC------CCHHHHHHHHHHHHHHHHHhCCCC-
Confidence 46888889889999999765443211 0 0000 00 011124778899999999999963
Q ss_pred CccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCc
Q 006746 189 DYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGK 268 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~ 268 (632)
..+|+||+|+|+|+.+++.++. ++ +.+++...+++ ..+ ...++..|++++.++.+ +++.+|+++|+ +++
T Consensus 61 ~~~v~~~~g~t~al~~~~~~l~-~~-~~i~~~~~~~~--~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~--~~~--- 129 (362)
T 3ffr_A 61 NYEVLFLASATEIWERIIQNCV-EK-KSFHCVNGSFS--KRF-YEFAGELGREAYKEEAA-FGKGFYPADIT--VPA--- 129 (362)
T ss_dssp TEEEEEESCHHHHHHHHHHHHC-SS-EEEEEECSHHH--HHH-HHHHHHTTCEEEEEECC-TTCCCCGGGCC--CCT---
T ss_pred CcEEEEeCCchHHHHHHHHhcc-CC-cEEEEcCcHHH--HHH-HHHHHHhCCCeEEEecC-CCCCCCHHHHh--ccC---
Confidence 3489999999999999999984 44 44556666664 233 44667889999999987 55678888887 333
Q ss_pred CCCceeEEEEeccCCCCccccchH-HHHHHhhC-CcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEE
Q 006746 269 KKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN-DWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGC 346 (632)
Q Consensus 269 ~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~-g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~ 346 (632)
+++++++++.+|+||..+|++ |.++|+++ |+++++|+++..+. .++++.. +|++++|+||++|. |.|+|+
T Consensus 130 ---~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~--~~~~~~~--~d~~~~s~~K~~~~-~~G~g~ 201 (362)
T 3ffr_A 130 ---DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPY--PKFDWTK--IDSVFFSVQKCFGL-PAGLGV 201 (362)
T ss_dssp ---TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTS--SCCCTTS--CSEEEEETTSTTCC-CSCCEE
T ss_pred ---CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCC--cccChhH--CcEEEEecccccCC-CCceEE
Confidence 469999999999999999999 99999999 99999999998886 4666654 89999999998885 779999
Q ss_pred EEEeCCCccccCCCCCC-CceeecccccccccccccCCCCCCccccchhhhh-hhccccCCCccchhhhhhcCCcccchh
Q 006746 347 LFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE-KVAATNTFSGPMSIEMRQSGKLEQGEI 424 (632)
Q Consensus 347 L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e-~e~gt~~f~~~~~~~~~~~Gt~~~~~i 424 (632)
++++++.++.+.+...| |.... ++. + ..+.+ .+.+. ..++++.+.+
T Consensus 202 ~~~~~~~~~~~~~~~~gg~~~~~------~~~--------~------~~~~~~~~~~~------------~~~~~~~~~~ 249 (362)
T 3ffr_A 202 WILNDRVIEKSKALLAKRKSIGT------YHT--------I------PSMLEKARVNQ------------TPETPNAMNI 249 (362)
T ss_dssp EEEEHHHHHHHHHHHHTTCCCCS------TTS--------H------HHHHHHHTTTC------------CSSCCCHHHH
T ss_pred EEECHHHHHHhhhccccCCCCcc------ccc--------H------HHHHHHhhcCC------------CCCCchHHHH
Confidence 99999887766654333 22211 000 0 00000 01110 1355666666
Q ss_pred hHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCC
Q 006746 425 SEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRF 504 (632)
Q Consensus 425 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~ 504 (632)
.++. .+++.+...|++.+.++.+.+.+++.+.|.++ |.++++.|....
T Consensus 250 ~~~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--------~g~~~~~~~~~~ 297 (362)
T 3ffr_A 250 FLLG------------------------KVTGDMLQISADGIRKQTEEKAALINTYIESS--------KVFSFGVEDAKL 297 (362)
T ss_dssp HHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC--------SSEEESSSCGGG
T ss_pred HHHH------------------------HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc--------cCceeccCChhh
Confidence 6665 88888888899999999999999999999987 778888754333
Q ss_pred CCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCc
Q 006746 505 DRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGIT 584 (632)
Q Consensus 505 ~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 584 (632)
..+.++.|.+.+ +...+.+.+.++||.++.|..|. +.+
T Consensus 298 ~~~~~~~~~~~~------~~~~~~~~l~~~gi~~~~g~~~~------------------------------------~~~ 335 (362)
T 3ffr_A 298 RSMTTIVANTTM------LPGEINKILEPFDMAVGAGYGSK------------------------------------KET 335 (362)
T ss_dssp BCSSEEEEEESS------CHHHHHHHHGGGTEEEEECSGGG------------------------------------TTT
T ss_pred cCCceEEEecCC------CHHHHHHHHHHCCeEEecCcccc------------------------------------CCC
Confidence 457788888865 45566655555699999774221 236
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 585 VVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 585 ~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
.||+|++.+++.|||+++++.|++++
T Consensus 336 ~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 336 QIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999875
No 21
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.97 E-value=1.8e-29 Score=270.23 Aligned_cols=365 Identities=16% Similarity=0.086 Sum_probs=270.6
Q ss_pred hhHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhH
Q 006746 91 YQIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESG 170 (632)
Q Consensus 91 ~~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~ 170 (632)
...+++|+ +||.+. ...+|||+.+.+..++.+++++.+.+.. .|+....+
T Consensus 18 ~~~~~~r~-~~~~~~-~~~~~l~~~~~~~~~~~v~~a~~~~~~~----------------------------~~~~~~~~ 67 (393)
T 1vjo_A 18 SINDNQRL-QLEPLE-VPSRLLLGPGPSNAHPSVLQAMNVSPVG----------------------------HLDPAFLA 67 (393)
T ss_dssp CCCCTTCC-CCCSCC-CCCCEECSSSCCCCCHHHHHHHSSCCCC----------------------------TTSHHHHH
T ss_pred eecchhhh-cCCccC-CccceeccCCCCCCCHHHHHHHhccccc----------------------------ccCHHHHH
Confidence 35567775 699885 4578999999999999999998664321 02212346
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
..+++++.+++++|++++ +.|+||+|+|+|+.+++.++ +++||+|++ ...|+++ . +...++..|++++.++.+
T Consensus 68 ~~~~~~~~la~~~g~~~~-~~v~~t~g~t~al~~~~~~~-~~~gd~Vl~~~~~~~~~--~-~~~~~~~~g~~~~~v~~~- 141 (393)
T 1vjo_A 68 LMDEIQSLLRYVWQTENP-LTIAVSGTGTAAMEATIANA-VEPGDVVLIGVAGYFGN--R-LVDMAGRYGADVRTISKP- 141 (393)
T ss_dssp HHHHHHHHHHHHHTCCCS-CEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHHH--H-HHHHHHHTTCEEEEEECC-
T ss_pred HHHHHHHHHHHHhCCCCC-cEEEEeCchHHHHHHHHHhc-cCCCCEEEEEcCChhHH--H-HHHHHHHcCCceEEEecC-
Confidence 788999999999999643 36999999999999999998 789999764 4566642 1 345567889999999997
Q ss_pred CccccCHHHHHHHHHh-cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 250 PRLRINSEKLRKMVVS-KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~-~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
+++.+++++|+++|++ + ++++++++.+|+||..+|++ |.++|+++|+++++|.++..|. .++++..+++|
T Consensus 142 ~~~~~d~~~l~~~l~~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~--~~~~~~~~~~d 213 (393)
T 1vjo_A 142 WGEVFSLEELRTALETHR------PAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGG--VPIFLDAWGVD 213 (393)
T ss_dssp TTCCCCHHHHHHHHHHHC------CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTT--SCCCTTTTTCS
T ss_pred CCCCCCHHHHHHHHhhCC------ceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccC--cCCcccccCcc
Confidence 4667999999999986 4 37999999999999999999 9999999999999999998876 47788888999
Q ss_pred EEEEccccccCCCCCceEEEEEeCCCccccCCC------CCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDN------TSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~------~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
++++|+||++|. |.|+|+++++++.++.+... ++.+.. |.. .+. ..+
T Consensus 214 i~~~s~sK~l~~-~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---------------~~~--~~~ 266 (393)
T 1vjo_A 214 LAYSCSQKGLGC-SPGASPFTMSSRAIEKLQRRRTKVANWYLDMN---------LLG---------------KYW--GSE 266 (393)
T ss_dssp EEECCSSSTTCS-CSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH---------HHH---------------HHH--STT
T ss_pred EEEEcCcccccC-CCceEEEEECHHHHHHHhccCCCCCceecCcH---------hhh---------------hhh--ccC
Confidence 999999997765 77999999998876655321 100000 000 000 000
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
.. ..|+++.+.+.++. .+|+.+.+.|++.+.++.+.+.+++.+.|
T Consensus 267 ~~-----------~~g~~~~~~~~a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L 311 (393)
T 1vjo_A 267 RV-----------YHHTAPINLYYALR------------------------EALRLIAQEGLANCWQRHQKNVEYLWERL 311 (393)
T ss_dssp CC-----------CCSCCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CC-----------CCCCCCHHHHHHHH------------------------HHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 00 12245566666665 78888777789999999999999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHH-HhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLA-DRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla-~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
.++ | +++++|.. ...+.++.|.+.+ | ++...+.+.+ +++||.++.|..|.
T Consensus 312 ~~~------g---~~~~~~~~-~~~~~~~~~~~~~--~--~~~~~~~~~l~~~~gi~v~~g~~~~--------------- 362 (393)
T 1vjo_A 312 EDI------G---LSLHVEKE-YRLPTLTTVCIPD--G--VDGKAVARRLLNEHNIEVGGGLGEL--------------- 362 (393)
T ss_dssp HHT------T---CCBSSCGG-GBCSSEEEEECCT--T--CCHHHHHHHHHHHHCEECEECCGGG---------------
T ss_pred HHc------C---CcccCCcc-ccCCcEEEEEcCC--C--CCHHHHHHHHHhhCCEEEecCcccc---------------
Confidence 987 3 34555532 2235678887753 1 4555555544 44599998774211
Q ss_pred hhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|+ ++.++.+|++++++.|+++++
T Consensus 363 ---------------------~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 363 ---------------------AGKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp ---------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred ---------------------CCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 236899995 677788899999999998864
No 22
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=1.2e-29 Score=269.09 Aligned_cols=348 Identities=12% Similarity=0.109 Sum_probs=246.5
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccc---ccccccchhHHHHHHHHHHHHHc
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT---QLLHGGQESGLESAMKKRIMDFL 183 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s---~~~~g~~~~~~~~~~R~~ia~~l 183 (632)
+.++|||++|..++|+.+++++.+.+.... ++..+ ...++....++.+++|+++++++
T Consensus 2 ~~~~~l~~~~~~~~~~~v~~a~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 62 (362)
T 2c0r_A 2 SERAYNFNAGPAALPLEVLERAQAEFVDYQ-------------------HTGMSIMEMSHRGAVYEAVHNEAQARLLALL 62 (362)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSST-------------------TSSSCGGGSCTTSHHHHHHHHHHHHHHHHHT
T ss_pred CcceeeccCCCCCCCHHHHHHHHHHHhhhh-------------------hcCccccccCCCcHHHHHHHHHHHHHHHHHh
Confidence 457999999999999999999887654210 01011 00012223567889999999999
Q ss_pred CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC--Ccc-ccCHHHH
Q 006746 184 NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW--PRL-RINSEKL 259 (632)
Q Consensus 184 ~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~--~~~-~i~~~~l 259 (632)
|++++...|++|+|+|+|+++++.++ +++||+|++. ..+++ ..+ ...++..| +++.++++. ..+ .++.+++
T Consensus 63 g~~~~~~~i~~t~g~t~a~~~~~~~l-~~~gd~vl~~~~~~~~--~~~-~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~ 137 (362)
T 2c0r_A 63 GNPTGYKVLFIQGGASTQFAMIPMNF-LKEGQTANYVMTGSWA--SKA-LKEAKLIG-DTHVAASSEASNYMTLPKLQEI 137 (362)
T ss_dssp TCCSSEEEEEESSHHHHHHHHHHHHH-CCTTCEEEEEECSHHH--HHH-HHHHHHHS-CEEEEEECGGGTTCSCCCGGGC
T ss_pred CCCCCcEEEEECCCchHHHHHHHHhc-CCCCCeEEEEecCcHh--HHH-HHHHHHhC-CeEEEecccccccccCCCHHHc
Confidence 99753123578899999999999998 6899997643 44443 123 34556779 999998762 122 2455444
Q ss_pred HHHHHhcCcCCCceeEEEEeccCCCCccc-cchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccc
Q 006746 260 RKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIF 337 (632)
Q Consensus 260 ~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~-~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~ 337 (632)
+ |++ +++++++++.+|+||.. .|++ | +|+++++|++|..+. .++++.++ |++++|+||++
T Consensus 138 ~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~--~~~~~~~~--d~~~~s~~K~~ 199 (362)
T 2c0r_A 138 Q--LQD------NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILS--RPFDLNQF--GLVYAGAQKNL 199 (362)
T ss_dssp C--CCT------TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTS--SCCCGGGC--SEEEEETTTTT
T ss_pred c--cCC------CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccC--CccchhHC--cEEEEeccccc
Confidence 2 332 46999999999999996 6787 6 799999999999987 47777654 99999999999
Q ss_pred CCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcC
Q 006746 338 GENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSG 417 (632)
Q Consensus 338 G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~G 417 (632)
| |.|+|+++++++.++.+.+.... ..+ |. ... +.+. ..+
T Consensus 200 g--~~G~G~l~~~~~~~~~l~~~~~~-~~~--------~~----------------~~~--~~~~------------~~~ 238 (362)
T 2c0r_A 200 G--PSGVTVVIVREDLVAESPKHLPT-MLR--------YD----------------TYV--KNNS------------LYN 238 (362)
T ss_dssp C--CSSCEEEEEEGGGSSSCCTTSCG-GGC--------HH----------------HHH--HTTT------------CSS
T ss_pred c--CcCcEEEEEcHHHHhhccccCch-HHh--------HH----------------HHh--hccC------------cCC
Confidence 9 88999999999887766542100 000 00 000 0000 135
Q ss_pred CcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEE
Q 006746 418 KLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVK 496 (632)
Q Consensus 418 t~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~ 496 (632)
|++.+.+.++. .+|+.+.+. |++.+.+|.+.++++|++.|.++ | ..++
T Consensus 239 t~~~~~~~a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~-~~~~ 287 (362)
T 2c0r_A 239 TPPSFGIYMVN------------------------EVLKWIEERGGLEGVQQANRKKASLIYDAIDQS------G-GFYR 287 (362)
T ss_dssp CCCHHHHHHHH------------------------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS------T-TSSE
T ss_pred CchHHHHHHHH------------------------HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc------C-Cccc
Confidence 56666677776 899988877 79999999999999999999987 3 1225
Q ss_pred EECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccc
Q 006746 497 IYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRK 576 (632)
Q Consensus 497 Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 576 (632)
++++.. ...+++++|.+.+ | ++...+.+.+.++||.++.|..
T Consensus 288 ~~~~~~-~~~~~~~~~~~~~--~--~~~~~~~~~L~~~gi~~~~g~~--------------------------------- 329 (362)
T 2c0r_A 288 GCVDVD-SRSDMNITFRLAS--E--ELEKEFVKASEQEGFVGLKGHR--------------------------------- 329 (362)
T ss_dssp ESSCGG-GBCSSEEEEECSC--H--HHHHHHHHHHHHTTEESCBCCT---------------------------------
T ss_pred cCCChH-HcCCcEEEEEcCC--c--chHHHHHHHHHHCCCeeccCCC---------------------------------
Confidence 555421 2346788888753 1 3456666667778997765420
Q ss_pred ccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 577 DKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 577 ~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|++.++|.|||++|+++|++++.
T Consensus 330 -----~~~~iRis~~~~~~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 330 -----SVGGLRASIYNAVPYESCEALVQFMEHFKR 359 (362)
T ss_dssp -----TTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 124799999999999999999999998864
No 23
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.97 E-value=1.5e-29 Score=271.44 Aligned_cols=329 Identities=10% Similarity=0.068 Sum_probs=241.7
Q ss_pred ccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcC--CE
Q 006746 165 GGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRG--AR 241 (632)
Q Consensus 165 g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G--~~ 241 (632)
+....++++++|+++++++|++ ..|+||+|+|+|+++++..+ .+||+|+ ...+|++. .| ...++..| ++
T Consensus 30 ~~~~~~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~~--~~gd~vi~~~~~~~~~--~~-~~~~~~~g~~~~ 101 (379)
T 3ke3_A 30 SKAFQEVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQL--TIDEDCLIIRNGWFSY--RW-TQILEKGKFAKS 101 (379)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHHH--CTTCEEEEEECSHHHH--HH-HHHHHHHCCSSE
T ss_pred CHHHHHHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHhC--CCCCeEEEEeCCchhH--HH-HHHHHHhCCCCc
Confidence 3345689999999999999997 27999999999999998765 5899976 45677753 33 34556666 48
Q ss_pred EEEEeccCC--------ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEecc
Q 006746 242 VMSAEFSWP--------RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 242 v~~v~~~~~--------~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaa 309 (632)
++.++.++. .+.+++++++++|.+. +++++++++++|.||..+| ++ |.++|+++|+++++|++
T Consensus 102 ~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~ 176 (379)
T 3ke3_A 102 STVLTAERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCI 176 (379)
T ss_dssp EEEEECEESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred eEEEeccccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 888887421 1358999999999642 2488999999999999999 99 99999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 310 ALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 310 q~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
|. |. .++++..+++|++++|+||++|. |.|+|+++++++.++.+.+....+. .... ..|.
T Consensus 177 ~~-g~--~~~~~~~~~~d~~~~s~~K~l~~-~~g~g~~~~~~~~~~~l~~~~~~~~---~~~~-~~~~------------ 236 (379)
T 3ke3_A 177 AS-GC--VWLDMKELGIDVLISAPQKGWSS-TPCAGLVMLSAAAIKKVESTESNCF---SLDL-KQWL------------ 236 (379)
T ss_dssp TC-TT--CCCCHHHHTCSEEEECTTTTTCS-CCCEEEEEECHHHHHHHHTCCCSCS---TTCH-HHHH------------
T ss_pred cc-CC--ccccccccCCCEEEecchhhcCC-CCceEEEEECHHHHHhhhcCCCCce---eecH-HHHH------------
Confidence 98 75 58888888999999999997765 8899999999998776654211000 0000 0010
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 469 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r 469 (632)
.....++.|..+| .+|++++.+.++. ++|+++.+.|++.+.+|
T Consensus 237 ---~~~~~~~~g~~~~----------~~t~~~~~~~a~~------------------------aal~~~~~~g~~~~~~~ 279 (379)
T 3ke3_A 237 ---TIMRAYENGGHAY----------HATMPTDSLRQFR------------------------DAILEAKEIGFDILRDA 279 (379)
T ss_dssp ---HHHHHHHTTSCCC----------SSCCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHH
T ss_pred ---HHHHhhhccCCCC----------CCCCCHHHHHHHH------------------------HHHHHHHHhcHHHHHHH
Confidence 0000012332222 2467888888887 89999998999999999
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEE-EEEEccCCCCccCHHH-HHHHHHhCCcEEccCccCChH
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPAL-AFNVFDWKREKIEPVL-VQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~iv-aFnv~~~~G~~i~~~~-V~kla~~~gI~lr~G~~c~~~ 547 (632)
.+.|.++|++.|.++ | ++++++. ..+.+++ .|.+.+ +.. ..+.+.++||.++.|..|..+
T Consensus 280 ~~~l~~~l~~~l~~~------g---~~~~~~~--~~~~~~i~~~~~~~-------~~~~~~~~L~~~Gi~v~~g~~~~~~ 341 (379)
T 3ke3_A 280 QWELGNRVRKVLTDK------G---IESVAAE--GFEAPGVVVSYTER-------DDMHKGSAFAEAGLQIAAGVPLKVG 341 (379)
T ss_dssp HHHHHHHHHHHHHHT------T---CCBSBCT--TCBCSSEEEEECSC-------HHHHSSHHHHHTTCCCEECCCCSSC
T ss_pred HHHHHHHHHHHHHHc------C---CEecCCc--cccCceEEEEccCC-------cchHHHHHHHHCCeEEeCCcccccc
Confidence 999999999999988 4 3455553 2456544 444432 222 245566789999888655421
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....+.||+|++.++|.+||+++++.|+++++.
T Consensus 342 -------------------------------~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 342 -------------------------------EPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp -------------------------------CCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred -------------------------------ccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence 0113469999999999999999999999988764
No 24
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=2.7e-28 Score=262.08 Aligned_cols=370 Identities=12% Similarity=0.041 Sum_probs=271.0
Q ss_pred ccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 101 YYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 101 f~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
|+.+. ....||...+-..++..+++++.+.... ++ +....+.++++|+.++
T Consensus 6 ~~~~~-~~~~~~~~pgp~~~~~~v~~a~~~~~~~--------~~--------------------~~~~~~~~~~~~~~la 56 (411)
T 3nnk_A 6 FSQLN-PPSRLLMGPGPINADPRVLRAMSSQLIG--------QY--------------------DPAMTHYMNEVMALYR 56 (411)
T ss_dssp SCSCC-CCCCEEESSSCCCCCHHHHHHHTSCCCC--------TT--------------------CHHHHHHHHHHHHHHH
T ss_pred ccccC-CccceeecCCCCCCCHHHHHHhhccccc--------cc--------------------cHHHHHHHHHHHHHHH
Confidence 45554 4567899889889999999997652200 00 0112367789999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHH
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKL 259 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l 259 (632)
+++|++++ ..|+||+|+|+|+.+++.++ +++||+|++ ...|+++. +...++..|++++.++++ .++.+|+++|
T Consensus 57 ~~~~~~~~-~~v~~~~sgt~al~~~~~~~-~~~gd~Vl~~~~~~~~~~---~~~~~~~~g~~~~~v~~~-~~~~~d~~~l 130 (411)
T 3nnk_A 57 GVFRTENR-WTMLVDGTSRAGIEAILVSA-IRPGDKVLVPVFGRFGHL---LCEIARRCRAEVHTIEVP-WGEVFTPDQV 130 (411)
T ss_dssp HHHTCCCS-EEEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHH---HHHHHHHTTCEEEEEECC-TTCCCCHHHH
T ss_pred HHhCCCCC-cEEEECCCcHHHHHHHHHHh-cCCCCEEEEecCCchHHH---HHHHHHHcCCeEEEEecC-CCCCCCHHHH
Confidence 99999854 35899999999999999999 889999764 55676532 345677889999999997 5677899999
Q ss_pred HHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccc-c
Q 006746 260 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQI-F 337 (632)
Q Consensus 260 ~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~-~ 337 (632)
+++|++. ++++|++++.+|+||...|++ |.++|+++|+++++|+++..+. .++++..+++|++++|+||+ +
T Consensus 131 ~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~--~~~~~~~~~~d~~~~s~~K~l~ 203 (411)
T 3nnk_A 131 EDAVKRI-----RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGG--NPLETDVWGLDAVSAGMQKCLG 203 (411)
T ss_dssp HHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTT--BCCCTTTTTCSEEECCSTTTTC
T ss_pred HHHHhhC-----CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCC--cccchhccCCcEEEecCccccC
Confidence 9999862 248999999999999999999 9999999999999999998876 57888888999999999995 6
Q ss_pred CCCCCceEEEEEeCCCccccCC------CCCCCceee---cccccccccccccCCCCCCccccchhhhhhhccccCCCcc
Q 006746 338 GENPSGFGCLFVKKSTVPILVD------NTSSGMVSL---LPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGP 408 (632)
Q Consensus 338 G~~P~G~G~L~Vr~~~~~~L~~------~~~gG~v~~---~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~ 408 (632)
| |.|+|+++++++.++.+.+ .+.||.... ......++. + ....... +...
T Consensus 204 ~--~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~--------~------~~~~~~~-~~~~---- 262 (411)
T 3nnk_A 204 G--PSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFD--------L------GMVMDYW-GPER---- 262 (411)
T ss_dssp C--CSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTC--------H------HHHHHHH-STTC----
T ss_pred C--CCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccc--------h------HHHHhhh-cccc----
Confidence 6 7899999999987665443 233321100 000000000 0 0000000 0000
Q ss_pred chhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCC
Q 006746 409 MSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPN 488 (632)
Q Consensus 409 ~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~ 488 (632)
...|+++++.+.++. .+++.+.+.|++.+.++.+.+.+++.+.|.++
T Consensus 263 -----~~~~~~~~~~~~a~~------------------------~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---- 309 (411)
T 3nnk_A 263 -----LNHHTEATTALFGAR------------------------ECARLILQEGLDYGIARHKLHGDALVKGIQAM---- 309 (411)
T ss_dssp -----CCCSCCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred -----CCCCCCCHHHHHHHH------------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----
Confidence 124667777777776 88998888899999999999999999999987
Q ss_pred CCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccc
Q 006746 489 TEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREA 567 (632)
Q Consensus 489 ~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 567 (632)
| ++++.+.. ...+.++.|.+.+ | ++...+.+ |++++||.++.|..
T Consensus 310 --g---~~~~~~~~-~~~~~~~~~~~~~--~--~~~~~l~~~l~~~~gi~v~~g~~------------------------ 355 (411)
T 3nnk_A 310 --G---LETFGDLK-HKMNNVLGVVIPQ--G--INGDQARKLMLEDFGIEIGTSFG------------------------ 355 (411)
T ss_dssp --T---CCBCSCGG-GBCSSEEEEECCT--T--CCHHHHHHHHHHHHSEEEEECCG------------------------
T ss_pred --C---CEeCCCcc-cccccEEEEECCC--C--CCHHHHHHHHHHhcCeEEeCccC------------------------
Confidence 3 34555532 2357788888753 1 45666655 55667999987620
Q ss_pred cccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 568 KSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+.||+|+ ++.+|.+||+++++.|+++++.
T Consensus 356 ------------~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 356 ------------PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp ------------GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ------------CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence 01235999998 8888999999999999998875
No 25
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.97 E-value=2.2e-28 Score=256.99 Aligned_cols=340 Identities=14% Similarity=0.050 Sum_probs=255.1
Q ss_pred EeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCc
Q 006746 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDY 190 (632)
Q Consensus 111 yLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey 190 (632)
||.++|..+.|+.+++++.+.+... ++....+.+.+.|+.+++++|++++
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~----------------------------~~~~~~~~~~~l~~~la~~~g~~~~-- 52 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHH----------------------------RTEAAREVFLKARGLLREAFRTEGE-- 52 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCT----------------------------TSHHHHHHHHHHHHHHHHHHTCSSE--
T ss_pred ccccCCCCCCCHHHHHHhccCCCCc----------------------------cCHHHHHHHHHHHHHHHHHhCCCCc--
Confidence 8999999999999999987643210 0111245678999999999999854
Q ss_pred cEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcC
Q 006746 191 GMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 269 (632)
Q Consensus 191 ~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~ 269 (632)
.|++|+|+|+|+.+++.++ +++||+|++ ..+|++. . +...++..|++++.++++ +++.+++++|++ +
T Consensus 53 ~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~--~-~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~---~---- 120 (352)
T 1iug_A 53 VLILTGSGTLAMEALVKNL-FAPGERVLVPVYGKFSE--R-FYEIALEAGLVVERLDYP-YGDTPRPEDVAK---E---- 120 (352)
T ss_dssp EEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHH--H-HHHHHHHTTCEEEEEECC-TTCCCCTTTSCC---S----
T ss_pred eEEEcCchHHHHHHHHHhc-cCCCCeEEEEeCCchhH--H-HHHHHHHcCCceEEEeCC-CCCCCCHHHHhc---c----
Confidence 7999999999999999998 789999765 4567762 2 345567789999999987 456678777755 2
Q ss_pred CCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccc-ccCCCCCceE
Q 006746 270 KKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQ-IFGENPSGFG 345 (632)
Q Consensus 270 ~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK-~~G~~P~G~G 345 (632)
+++++++++.+|+||..+|++ |.++|+++ |+++++|+++..+. .++++..+++|++++|+|| ++| |.|+|
T Consensus 121 --~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~--~~g~G 194 (352)
T 1iug_A 121 --GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLV--GEVALEAMGVDAAASGSQKGLMC--PPGLG 194 (352)
T ss_dssp --SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTT--BCCCSGGGTCSEEEEESSSTTCC--CSCEE
T ss_pred --CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccC--cceeccccCeeEEEecCcccccC--CCcee
Confidence 358999999999999999999 99999999 99999999998776 4677777789999999999 556 88999
Q ss_pred EEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhh
Q 006746 346 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 425 (632)
Q Consensus 346 ~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~ 425 (632)
+++++++.++.+.+ ++.. .....++ .. ...+ ...|+++.+.+.
T Consensus 195 ~~~~~~~~~~~~~~---~~~~---~~~~~~~-----------------~~--~~~~------------~~~~~~~~~~~~ 237 (352)
T 1iug_A 195 FVALSPRALERLKP---RGYY---LDLAREL-----------------KA--QKEG------------ESAWTPAINLVL 237 (352)
T ss_dssp EEEECHHHHHTCCC---CSST---TCHHHHH-----------------HH--HTTT------------CCSSCCCHHHHH
T ss_pred EEEECHHHHHHhhC---CCce---eeHHHHH-----------------hh--cccC------------CCCCCCCHHHHH
Confidence 99999887766654 1100 0000000 00 0000 013455666666
Q ss_pred HhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCC
Q 006746 426 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 505 (632)
Q Consensus 426 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~ 505 (632)
++. .+|+.+.+. ++.+.++.+.+.+++.+.|.++ | +++++|. .
T Consensus 238 a~~------------------------~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~---~ 280 (352)
T 1iug_A 238 AVA------------------------AVLEEVLPR-LEEHLALKAWQNALLYGVGEEG------G---LRPVPKR---F 280 (352)
T ss_dssp HHH------------------------HHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT------T---CEESCSS---B
T ss_pred HHH------------------------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC------C---Ccccccc---c
Confidence 665 788877665 8899999999999999999986 3 4566553 2
Q ss_pred CCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcE
Q 006746 506 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 585 (632)
Q Consensus 506 rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (632)
.+.++.|.+.+ | ++...+.+.+.++||.++.|..+ ...+.
T Consensus 281 ~~~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~~~~~------------------------------------~~~~~ 320 (352)
T 1iug_A 281 SPAVAAFYLPE--G--VPYARVKEAFAQRGAVIAGGQGP------------------------------------LKGKV 320 (352)
T ss_dssp CTTCEEEECCT--T--CCHHHHHHHHHTTTEECEECCGG------------------------------------GTTTE
T ss_pred CCeEEEEEcCC--C--CCHHHHHHHHHHCCEEEEeCCCc------------------------------------cCCCE
Confidence 56788888763 2 46666766666779999876410 12358
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 586 VTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 586 VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
||+|++.+++.+||+++++.|++++..
T Consensus 321 iRi~~~~~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 321 FRLSLMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp EEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEccccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998753
No 26
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.97 E-value=2.9e-28 Score=255.40 Aligned_cols=345 Identities=12% Similarity=0.072 Sum_probs=256.0
Q ss_pred EeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCc
Q 006746 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDY 190 (632)
Q Consensus 111 yLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey 190 (632)
+|.++|..+.|+.+++++.+.+.. + ++....+.++++|+.+++++|++.+..
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~------------------------~----~~~~~~~~~~~l~~~la~~~g~~~~~~ 53 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRG------------------------H----LDPEVLRVNRAIQERLAALFDPGEGAL 53 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCC------------------------T----TCHHHHHHHHHHHHHHHHHHCCCTTCE
T ss_pred ccCCCCCCCCCHHHHHHHhccccc------------------------c----cCHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 466788889999999987654321 0 111124667899999999999963334
Q ss_pred cEEEeCCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcC
Q 006746 191 GMVFTANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 269 (632)
Q Consensus 191 ~vvft~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~ 269 (632)
.|+||+|+|+|+.+++.++ .+ |+|+ ...+|++. .+ ...++..|++++.++.+ +++.+++++|++++++.
T Consensus 54 ~v~~t~g~t~a~~~~~~~~-~~--d~vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~l~~~--- 123 (353)
T 2yrr_A 54 VAALAGSGSLGMEAGLANL-DR--GPVLVLVNGAFSQ--RV-AEMAALHGLDPEVLDFP-PGEPVDPEAVARALKRR--- 123 (353)
T ss_dssp EEEESSCHHHHHHHHHHTC-SC--CCEEEEECSHHHH--HH-HHHHHHTTCCEEEEECC-TTSCCCHHHHHHHHHHS---
T ss_pred eEEEcCCcHHHHHHHHHHh-cC--CcEEEEcCCCchH--HH-HHHHHHcCCceEEEeCC-CCCCCCHHHHHHHHHhC---
Confidence 7999999999999999988 33 6765 45577762 33 45667889999999997 56779999999999861
Q ss_pred CCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEE
Q 006746 270 KKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLF 348 (632)
Q Consensus 270 ~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~ 348 (632)
+++++++++.+|+||..+|++ |.++|+++|+++++|+++..+. .++++..+++|++++|+||+++. |.|+|+++
T Consensus 124 --~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~-~~g~G~~~ 198 (353)
T 2yrr_A 124 --RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGM--LPFSMRAMGVDYAFTGSQKCLSA-PPGLAPIA 198 (353)
T ss_dssp --CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTT--SCCCHHHHTCSEEECCTTSTTCC-CSSCEEEE
T ss_pred --CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccc--ccccccccCceEEEecCcccccC-CCceEEEE
Confidence 248999999999999999999 9999999999999999998776 36677667899999999995443 77999999
Q ss_pred EeCCCccccCC--CCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhH
Q 006746 349 VKKSTVPILVD--NTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISE 426 (632)
Q Consensus 349 Vr~~~~~~L~~--~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~ 426 (632)
++++.++.++. .++... . .+ .... ... ...|+++.+.+.+
T Consensus 199 ~~~~~~~~l~~~~~~~~~~-------~-~~----------------~~~~--~~~------------~~~~~~~~~~~~a 240 (353)
T 2yrr_A 199 ASLEARKAFTGKRGWYLDL-------A-RV----------------AEHW--ERG------------GYHHTTPVLLHYA 240 (353)
T ss_dssp ECHHHHHHCCCCSCSTTCH-------H-HH----------------HHHH--TTC------------CCSSCCCHHHHHH
T ss_pred ECHHHHHHhccCCCccccH-------H-HH----------------hhhh--hcC------------CCCCCCCHHHHHH
Confidence 99988766652 111000 0 00 0000 000 0134455555666
Q ss_pred hhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCC
Q 006746 427 VRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR 506 (632)
Q Consensus 427 l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~r 506 (632)
+. .+|+.+.+.|++.+.++.+.+.+++.+.|.++ | ++++++. ...
T Consensus 241 ~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~--~~~ 285 (353)
T 2yrr_A 241 LL------------------------EALDLVLEEGVAARERRAREVYAWVLEELKAR------G---FRPYPKA--SPL 285 (353)
T ss_dssp HH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT------T---CEESCSS--SBC
T ss_pred HH------------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC------C---CccccCc--cCC
Confidence 65 78888877899999999999999999999886 3 4566642 124
Q ss_pred CcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEE
Q 006746 507 GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVV 586 (632)
Q Consensus 507 g~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~V 586 (632)
+.++.|.+.+ | ++...+.+.+.++||.++.|..|. ..+.|
T Consensus 286 ~~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~g~~~~------------------------------------~~~~i 325 (353)
T 2yrr_A 286 PTVLVVRPPE--G--VDADRLVRALYAEGVAVAGGIGPT------------------------------------RGQVL 325 (353)
T ss_dssp TTEEEEECCT--T--CCHHHHHHHHHHTTEECEECCGGG------------------------------------TTTCE
T ss_pred CeEEEEECCC--C--CCHHHHHHHHHHCCEEEeCCcccc------------------------------------CCCeE
Confidence 6677888752 1 466677766666799998774221 23589
Q ss_pred EEccCCCCCHHHHH-HHHHHHHHhhh
Q 006746 587 TASLGYLANFEDVY-RLWAFVAQFLD 611 (632)
Q Consensus 587 RvSlg~~~t~eDV~-rlv~~l~~~l~ 611 (632)
|+|++.+++.+|++ ++++.|+++++
T Consensus 326 Ri~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 326 RLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp EEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred EEecCccCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999 99999998875
No 27
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.97 E-value=3.2e-28 Score=260.45 Aligned_cols=366 Identities=15% Similarity=0.106 Sum_probs=264.4
Q ss_pred hccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHH
Q 006746 100 EYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRI 179 (632)
Q Consensus 100 ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~i 179 (632)
.||.|. ...+|+++.+-..+++.+++++.+.+.. + |+......+++.|+.+
T Consensus 10 ~~~~~~-~~~~~~~~~~p~~~~~~v~~a~~~~~~~--------------------------~--~~~~~~~~~~~l~~~l 60 (396)
T 2ch1_A 10 LRNPLI-IPEKIMMGPGPSNCSKRVLTAMTNTVLS--------------------------N--FHAELFRTMDEVKDGL 60 (396)
T ss_dssp GSSCCC-CCCCBCCSSSSCCCCHHHHHHTTSCCCC--------------------------T--TCHHHHHHHHHHHHHH
T ss_pred cCCCCC-CCcceeecCCCCCCCHHHHHHhcccccc--------------------------C--CChhHHHHHHHHHHHH
Confidence 388885 5778999999889999999987553210 0 1111235678999999
Q ss_pred HHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHH
Q 006746 180 MDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEK 258 (632)
Q Consensus 180 a~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~ 258 (632)
++++|++++ +.|++|+|+|+|+.+++.++ +++||+|++ ...|++ ..+ ...++..|++++.++.+ +++.+|+++
T Consensus 61 a~~~~~~~~-~~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~~~~~~--~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~ 134 (396)
T 2ch1_A 61 RYIFQTENR-ATMCVSGSAHAGMEAMLSNL-LEEGDRVLIAVNGIWA--ERA-VEMSERYGADVRTIEGP-PDRPFSLET 134 (396)
T ss_dssp HHHHTCCCS-CEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHH--HHH-HHHHHHTTCEEEEEECC-TTSCCCHHH
T ss_pred HHHhCCCCC-cEEEECCcHHHHHHHHHHHh-cCCCCeEEEEcCCccc--HHH-HHHHHHcCCceEEecCC-CCCCCCHHH
Confidence 999999754 36999999999999999998 789999764 456764 333 34567889999999987 567799999
Q ss_pred HHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccc
Q 006746 259 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIF 337 (632)
Q Consensus 259 l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~ 337 (632)
|+++|++. ++++|++++.+|+||..+|++ |.++|+++|+++++|+++..|. .++++..+++|++++|+||++
T Consensus 135 l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~--~~~~~~~~~~d~~~~s~~K~~ 207 (396)
T 2ch1_A 135 LARAIELH-----QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCG--VPFYMDKWEIDAVYTGAQKVL 207 (396)
T ss_dssp HHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTT--BCCCTTTTTCCEEECCCC-CC
T ss_pred HHHHHHhC-----CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccC--CccchhhcCcCEEEEcCCccc
Confidence 99999862 148999999999999999999 9999999999999999998876 477888889999999999965
Q ss_pred CCCCCceEEEEEeCCCccccCCCC--CCC-ceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhh
Q 006746 338 GENPSGFGCLFVKKSTVPILVDNT--SSG-MVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMR 414 (632)
Q Consensus 338 G~~P~G~G~L~Vr~~~~~~L~~~~--~gG-~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~ 414 (632)
+. |.|+|+++++++.++.+.... .+. ..+.. ....+|... .. .. .
T Consensus 208 ~~-~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------------------~~-~~---------~ 255 (396)
T 2ch1_A 208 GA-PPGITPISISPKALDVIRNRRTKSKVFYWDLL-LLGNYWGCY--------------------DE-PK---------R 255 (396)
T ss_dssp CC-CSSCEEEEECHHHHHHHHTCSSCCSCGGGCHH-HHHHHTTCS--------------------SS-CC---------C
T ss_pred cC-CCCeEEEEECHHHHHhhhhccCcccceEechH-HHHHhhhhh--------------------cc-cC---------C
Confidence 54 789999999987776554321 010 00000 000001000 00 00 0
Q ss_pred hcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCc
Q 006746 415 QSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNAL 494 (632)
Q Consensus 415 ~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~ 494 (632)
..|+++.+.+.++. .+|+.+.+.+++.+.++.+.+.+++.+.|.++ |
T Consensus 256 ~~~~~~~~~~~a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g--- 302 (396)
T 2ch1_A 256 YHHTVASNLIFALR------------------------EALAQIAEEGLENQIKRRIECAQILYEGLGKM------G--- 302 (396)
T ss_dssp CCCCCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH------T---
T ss_pred CCCCCcHHHHHHHH------------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC------C---
Confidence 13445555555554 78888766789999999999999999999987 4
Q ss_pred EEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccc
Q 006746 495 VKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDN 573 (632)
Q Consensus 495 v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 573 (632)
++++.|......+.++.|.+.+ | ++...+.+ |++++||.++.|..|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~L~~~~gi~v~~g~~~----------------------------- 349 (396)
T 2ch1_A 303 LDIFVKDPRHRLPTVTGIMIPK--G--VDWWKVSQYAMNNFSLEVQGGLGP----------------------------- 349 (396)
T ss_dssp CCBSSCSGGGBCTTEEEEECCT--T--CCHHHHHHHHHHHHCBCCBCCCGG-----------------------------
T ss_pred CeeccCCccccCCceEEEEcCC--C--CCHHHHHHHHHHhCCEEEecCccc-----------------------------
Confidence 3455553212234588888752 2 45666654 555679999876421
Q ss_pred cccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 574 NRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 574 ~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.||+|+ ++.++.||++++++.|+++++.
T Consensus 350 -------~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 350 -------TFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp -------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred -------cCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence 0235899999 6778999999999999998864
No 28
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=1.2e-27 Score=254.44 Aligned_cols=357 Identities=13% Similarity=0.104 Sum_probs=254.7
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE 187 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~ 187 (632)
...|+...|-..+++.+++++...... + .++. ....+.+.|+.++++++...
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~--------~------------~~~~--------~~~~~~~~~~~l~~~~~~~~ 55 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG--------H------------TSPE--------FVSIFQRVLKNTRAVFKSAA 55 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC--------T------------TSHH--------HHHHHHHHHHHHHHHTTCCG
T ss_pred ccceeecCCCcCchHHHHHHHhccccc--------c------------CCHH--------HHHHHHHHHHHHHHHhCCCC
Confidence 355788888888889888886543210 0 1221 12355678888888888741
Q ss_pred --CCccEEEeCCHHHHHHHHHhhCC--CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec-cCCccccCHHHHHH
Q 006746 188 --NDYGMVFTANRTSAFKLLAESYP--FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF-SWPRLRINSEKLRK 261 (632)
Q Consensus 188 --~ey~vvft~naT~al~lv~~sl~--~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~-~~~~~~i~~~~l~~ 261 (632)
+...|+||+|+|+|+.+++.++. +++||+|++. ..++...+ ...++..|++++.+++ + .++.+|+++|++
T Consensus 56 ~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~ 131 (385)
T 2bkw_A 56 ASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVVRPLK-IGESVPLELITE 131 (385)
T ss_dssp GGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEECCSS-TTSCCCHHHHHH
T ss_pred CCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEEecCC-CCCCCCHHHHHH
Confidence 11379999999999999999874 3789997654 44443222 2455778999999998 6 567799999999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccC
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFG 338 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G 338 (632)
+|++. ++++|++++.+|+||..+|++ |.++|+++ |+++++|+++..+. .++++..+++|++++|+||+++
T Consensus 132 ~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~ 204 (385)
T 2bkw_A 132 KLSQN-----SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGC--EEFEFDEWGVDFALTASQKAIG 204 (385)
T ss_dssp HHHHS-----CCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTT--SCCCTTTTTCSEEEEESSSTTC
T ss_pred HHhcC-----CCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCC--ccccccccCceEEEecCccccc
Confidence 99862 248999999999999999999 99999999 99999999998876 4677888899999999999554
Q ss_pred CCCCceEEEEEeCCCcc-ccCC------CCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchh
Q 006746 339 ENPSGFGCLFVKKSTVP-ILVD------NTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSI 411 (632)
Q Consensus 339 ~~P~G~G~L~Vr~~~~~-~L~~------~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~ 411 (632)
. |.|+|+++++++.++ .+++ ..+++... .|. +....++.++..
T Consensus 205 ~-~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~---------------~~~~~~~~~~~~------- 254 (385)
T 2bkw_A 205 A-PAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLR-------RWT---------------PIMENYEAGKGA------- 254 (385)
T ss_dssp C-CSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHH-------HHH---------------HHHHHHHTTCCC-------
T ss_pred c-CCcceEEEEcHHHHHHHHhhccCCCCCceeecHH-------HHh---------------hHHHhhhccCCC-------
Confidence 3 789999999988766 5531 11111100 000 000001111100
Q ss_pred hhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH-HccCCCCCC
Q 006746 412 EMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL-MKLQHPNTE 490 (632)
Q Consensus 412 ~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L-~~l~h~~~~ 490 (632)
+.++++++.+.++. .+|+.+.+.|++.+.++.+.+.++|.+.| .++
T Consensus 255 ---~~~~~~~~~~~a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------ 301 (385)
T 2bkw_A 255 ---YFATPPVQLINSLD------------------------VALKEILEEGLHKRWDLHREMSDWFKDSLVNGL------ 301 (385)
T ss_dssp ---CSSCCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT------
T ss_pred ---CCCCCCHHHHHHHH------------------------HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc------
Confidence 12456666666665 88988877799999999999999999999 776
Q ss_pred CCCcEEEECCCCCC-CCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccc
Q 006746 491 GNALVKIYGPKIRF-DRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKS 569 (632)
Q Consensus 491 G~p~v~Iygp~~~~-~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 569 (632)
| ++++.|.... ..+.++.|.+.+ ...+.+.+.++||.++.|..+.
T Consensus 302 g---~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~gi~v~~g~~~~------------------------ 347 (385)
T 2bkw_A 302 Q---LTSVSRYPSNMSAHGLTAVYVAD-------PPDVIAFLKSHGVVIAGGIHKD------------------------ 347 (385)
T ss_dssp C---CEESSCSSSTTBCSSCEEEECSC-------HHHHHHHHHHTTEECBCCCCTT------------------------
T ss_pred C---ceecccCcccccCCceEEEecCC-------HHHHHHHHHHCCeEEeCCCCcc------------------------
Confidence 3 5666543212 367888888753 3445555567899998774321
Q ss_pred cccccccccCCCCCcEEEEc-cC---CCCCHHHHHHHHHHHHHhhh
Q 006746 570 KSDNNRKDKANLGITVVTAS-LG---YLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 570 ~~~~~~~~~~~~~~~~VRvS-lg---~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+.||+| ++ +.+|.|||+++++.|+++++
T Consensus 348 -----------~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 348 -----------IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp -----------TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred -----------cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 123689999 76 35899999999999998865
No 29
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.96 E-value=1.7e-27 Score=256.24 Aligned_cols=327 Identities=13% Similarity=0.104 Sum_probs=245.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.++++|+.+++++|++++ ..+++|+|+|+|+.+++.++ +++||+|++ ...|+++. +...++..|++++.+++
T Consensus 43 ~~~~~~l~~~la~~~g~~~~-~~~~~~~s~t~al~~~~~~l-~~~gd~Vl~~~~~~~~~~---~~~~~~~~g~~~~~v~~ 117 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNR-WAYPIDGTSRAGIEAVLASV-IEPEDDVLIPIYGRFGYL---LTEIAERYGANVHMLEC 117 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCS-EEEEEESCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHH---HHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCC-cEEEecCcHHHHHHHHHHHh-cCCCCEEEEecCCcccHH---HHHHHHhcCCeeEEEec
Confidence 46788999999999999854 24459999999999999999 899999764 56776522 34567888999999999
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
+ +++.+|+++|+++|++. ++++|++++.+|+||...|++ |.++|+++|+++++|++|..+. .++++..+++
T Consensus 118 ~-~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~ 189 (416)
T 3isl_A 118 E-WGTVFDPEDIIREIKKV-----KPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGG--CEVKVDEWKI 189 (416)
T ss_dssp C-TTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTT--SCCCTTTTTC
T ss_pred C-CCCCCCHHHHHHHHhhC-----CCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccC--CCcchhhcCC
Confidence 8 56788999999999842 248999999999999999999 9999999999999999998886 5788888899
Q ss_pred cEEEEccccc-cCCCCCceEEEEEeCCCccccCCCC---------------CCCceeecccccccccccccCCCCCCccc
Q 006746 327 DFLICSFYQI-FGENPSGFGCLFVKKSTVPILVDNT---------------SSGMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 327 Df~~~S~hK~-~G~~P~G~G~L~Vr~~~~~~L~~~~---------------~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
|++++|+||+ +| |.|+|+++++++.++.+.+.. .||.. .. ..++ .
T Consensus 190 d~~~~s~~K~l~g--~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~-~~---~~~~----------~--- 250 (416)
T 3isl_A 190 DAAIGGTQKCLSV--PSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRP-IT---SNYF----------D--- 250 (416)
T ss_dssp SEEECCSSSTTCC--CSSEEEEEECHHHHHHHHTC------------------CCC-CS---CSTT----------C---
T ss_pred CEEEecCccccCC--CCCeEEEEECHHHHHHhhccccccccccccccchhccCCCC-CC---cccc----------c---
Confidence 9999999995 66 889999999998877665421 11110 00 0000 0
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 470 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~ 470 (632)
.+.+.. ...... ...|+++.+.+.++. .+++.+...|++.+.++.
T Consensus 251 -~~~~~~-~~~~~~---------~~~~~~~~~~~~a~~------------------------~al~~~~~~g~~~~~~~~ 295 (416)
T 3isl_A 251 -LSQLED-YWSERR---------LNHHTEATTMLYALR------------------------EGVRLVLEEGLETRFERH 295 (416)
T ss_dssp -HHHHHH-HTSTTC---------CCSSCCCHHHHHHHH------------------------HHHHHHHHHCHHHHHHHH
T ss_pred -hHHHHh-hhcccC---------CCCCCCCHHHHHHHH------------------------HHHHHHHHhhHHHHHHHH
Confidence 000000 000000 124667777777776 889988888999999999
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHH
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~ 549 (632)
+.+.+++.+.|.++ | +++++|.. ...+.++.|.+++. ++...+.+ |++++||.++.|..
T Consensus 296 ~~~~~~l~~~L~~~------g---~~~~~~~~-~~~~~~~~~~~~~~----~~~~~l~~~L~~~~gi~v~~g~~------ 355 (416)
T 3isl_A 296 RHHEAALAAGIKAM------G---LRLFGDDS-CKMPVVTCVEIPGG----IDGESVRDMLLAQFGIEIASSFG------ 355 (416)
T ss_dssp HHHHHHHHHHHHHT------T---CCBCSCGG-GBCTTEEEEECCTT----CCHHHHHHHHHHHHCEECBCCCS------
T ss_pred HHHHHHHHHHHHHc------C---CEeccCcc-ccCCcEEEEeCCCC----CCHHHHHHHHHHhCCEEEecCCC------
Confidence 99999999999986 3 44556542 23467888888531 45566655 44556999987630
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHH-HHHHHHHHHHhhhh
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFED-VYRLWAFVAQFLDA 612 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eD-V~rlv~~l~~~l~~ 612 (632)
....+.||+|++.+++.+| |+++++.|+++++.
T Consensus 356 ------------------------------~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 356 ------------------------------PLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp ------------------------------TTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 1134699999988887777 99999999998875
No 30
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.96 E-value=7.7e-28 Score=255.67 Aligned_cols=352 Identities=11% Similarity=0.069 Sum_probs=253.7
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
.+|+-+.|-.++|+.+++++.+.+..+ ++....+.++++++.+++++|++++
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~----------------------------~~~~~~~~~~~~~~~la~~~g~~~~ 70 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPYF----------------------------RTTEFSSTMLENEKFMLEYAKAPEG 70 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCCC----------------------------SSHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCCC----------------------------CCHHHHHHHHHHHHHHHHHhCCCCC
Confidence 556667778889999999976532100 0111246778999999999999754
Q ss_pred CccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcC
Q 006746 189 DYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKG 267 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~ 267 (632)
...+++|+|+|+|+++++.++ .++||+|++. ..+++ ..+ ...++..|+++..++.+ .++.+|+++|+++++++
T Consensus 71 ~~~i~~~~ggt~al~~~~~~~-~~~gd~vi~~~~~~~~--~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~~~~~- 144 (376)
T 3f0h_A 71 SKAVFMTCSSTGSMEAVVMNC-FTKKDKVLVIDGGSFG--HRF-VQLCEIHEIPYVALKLE-HGKKLTKEKLYEYDNQN- 144 (376)
T ss_dssp CEEEEESSCHHHHHHHHHHHH-CCTTCCEEEEESSHHH--HHH-HHHHHHTTCCEEEEECC-TTCCCCHHHHHTTTTSC-
T ss_pred ceEEEEcCChhHHHHHHHHhc-cCCCCeEEEEeCChhh--HHH-HHHHHHcCCceEEEeCC-CCCCCCHHHHHHhhccC-
Confidence 334445999999999999998 6899997654 34553 222 34567789999999987 55679999998876543
Q ss_pred cCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceEE
Q 006746 268 KKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGC 346 (632)
Q Consensus 268 ~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~ 346 (632)
++++++++.+|+||..+|++ |.++|+++|+++++|++|..+. .++++..+++|++++|+||++|. |.|+|+
T Consensus 145 -----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~--~~~~~~~~~~d~~~~s~~K~l~~-~~G~g~ 216 (376)
T 3f0h_A 145 -----FTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLA--DPFNMNECGADVMITGSQKVLAC-PPGISV 216 (376)
T ss_dssp -----CCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTT--SCCCHHHHTCSEEEEETTTTTCC-CSSCEE
T ss_pred -----ceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccC--ccccccccCccEEEecCcccccC-CCceEE
Confidence 58999999999999999999 9999999999999999998876 46777778899999999998875 779999
Q ss_pred EEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhH
Q 006746 347 LFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISE 426 (632)
Q Consensus 347 L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~ 426 (632)
++++++.++.+.+....+.. .....++ ... ...++ ..++++..+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~----------------~~~--~~~~~-------------~~~~~~~~~~a 262 (376)
T 3f0h_A 217 IVLAPRGVERVEKSKVRTMY---FDLKDAL----------------KNQ--ERGQT-------------PFTPAVGILLQ 262 (376)
T ss_dssp EEECHHHHHHHHTCCCCCST---TCHHHHH----------------HHH--TTTCC-------------SSCCCHHHHHH
T ss_pred EEECHHHHHHhhcCCCCcee---ecHHHHH----------------hhc--ccCCC-------------CCCCcHHHHHH
Confidence 99999887666542211100 0000000 000 00111 11223333355
Q ss_pred hhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCC
Q 006746 427 VRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 505 (632)
Q Consensus 427 l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~ 505 (632)
+. ++++.+.+. |++.+.++.+.+.+++.+.|.++ | ++++.+. .
T Consensus 263 ~~------------------------~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~---~~~~~~~---~ 306 (376)
T 3f0h_A 263 IN------------------------ERLKEIKKHGGADAEVARIASQAADFRAKIKDL------P---FELVSES---P 306 (376)
T ss_dssp HH------------------------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS------S---EEECCSS---B
T ss_pred HH------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc------C---CccCccc---c
Confidence 54 788888887 69999999999999999999887 3 5666542 3
Q ss_pred CCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCc
Q 006746 506 RGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGIT 584 (632)
Q Consensus 506 rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 584 (632)
...++.+...+ ++...+.+ |.++.||.++.|. + ....+
T Consensus 307 ~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~----~--------------------------------~~~~~ 345 (376)
T 3f0h_A 307 ANGVTSVHPTT-----ANAYDIFLKLKDEYGIWICPNG----G--------------------------------EMKDT 345 (376)
T ss_dssp BTTEEEEEESS-----SCHHHHHHHHHHHSSEECEECC----G--------------------------------GGTTT
T ss_pred CceEEEEeCCC-----CCHHHHHHHHHHhCCEEEecCc----c--------------------------------ccCCC
Confidence 45666666443 45566654 5555599998762 0 01236
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 585 VVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 585 ~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
+||+|++.++|.|||+++++.|+++++..
T Consensus 346 ~lRis~~~~~t~e~i~~~~~~l~~~l~~~ 374 (376)
T 3f0h_A 346 IFRVGHIGALTHEDNTTLVNAFKDLQKRN 374 (376)
T ss_dssp CEEEECCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999998754
No 31
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.96 E-value=4.3e-27 Score=247.77 Aligned_cols=323 Identities=11% Similarity=0.076 Sum_probs=235.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEE-EeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+++.|+++++++|.+.+...|+||+|+|+|+.+++.++ .++||+|+ ....+|.. .+...++..|++++.++++
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~-~~~gd~vi~~~~~~~~~---~~~~~~~~~g~~~~~v~~~ 112 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSA-LGPQDKVLIVSNGAYGA---RMVEMAGLMGIAHHAYDCG 112 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHS-CCTTCCEEEEESSHHHH---HHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHh-cCCCCeEEEEeCCCccH---HHHHHHHHhCCceEEEeCC
Confidence 4567899999999994322136999999999999999999 57899865 43333321 1234567789999999987
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
+.+.+|+++|+++|++++ +++++++++.+|+||..+|++ |.++|+++|+++++|+++..+. .++++..+++|
T Consensus 113 -~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~--~~~~~~~~~~d 185 (366)
T 1m32_A 113 -EVARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGG--IPMDIAALHID 185 (366)
T ss_dssp -TTSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTT--SCCCTTTTTCS
T ss_pred -CCCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccC--cCccccccCcc
Confidence 567799999999998632 358899999999999999999 9999999999999999998876 46777778899
Q ss_pred EEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCc
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 407 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~ 407 (632)
++++|+||+++. |.|+|+++++++.++.+.+...+ . .......|. .+. ...++
T Consensus 186 i~~~s~~K~~~~-~~g~G~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~----------------~~~-~~~~~----- 238 (366)
T 1m32_A 186 YLISSANKCIQG-VPGFAFVIAREQKLAACKGHSRS-L---SLDLYAQWR----------------CME-DNHGK----- 238 (366)
T ss_dssp EEEEESSSTTCC-CSSEEEEEEEHHHHTTCTTCCSC-S---TTCHHHHHH----------------HHH-HTTTC-----
T ss_pred EEEecCcccccC-CCceEEEEECHHHHHhhcCCCCC-c---cccHHHHHh----------------hhc-ccCCC-----
Confidence 999999996533 88999999999877666542110 0 000000000 000 00011
Q ss_pred cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHccCC
Q 006746 408 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG-LTMISRRGRCLINWLVNALMKLQH 486 (632)
Q Consensus 408 ~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G-l~~I~~r~~~L~~~L~~~L~~l~h 486 (632)
+.++++.+.+.++. ++|+.+.+.| ++.+.++.+.+.+++.+.|.++
T Consensus 239 -------~~~~~~~~~~~a~~------------------------~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-- 285 (366)
T 1m32_A 239 -------WRFTSPTHTVLAFA------------------------QALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-- 285 (366)
T ss_dssp -------CSSCCCHHHHHHHH------------------------HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred -------CCCCCCHHHHHHHH------------------------HHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC--
Confidence 12344555555555 8888888878 8999999999999999999987
Q ss_pred CCCCCCCcEEEECCCCCCCCCc-EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhc
Q 006746 487 PNTEGNALVKIYGPKIRFDRGP-ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 565 (632)
Q Consensus 487 ~~~~G~p~v~Iygp~~~~~rg~-ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~ 565 (632)
| ++++.|.. .+++ ++.|.+.+..+ ++...+.+.+.++||.++.|..|
T Consensus 286 ----~---~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~~~~--------------------- 333 (366)
T 1m32_A 286 ----G---FNTLLDDE--LHSPIITAFYSPEDPQ--YRFSEFYRRLKEQGFVIYPGKVS--------------------- 333 (366)
T ss_dssp ----T---CCBSSCGG--GBCSSEEEEECCCCTT--CCHHHHHHHHHHTTEECEECCCS---------------------
T ss_pred ----C---CeeccCch--hcCceEEEEEcCccCC--CCHHHHHHHHHHCCEEEECCcCC---------------------
Confidence 3 34445421 2444 88888763111 46666766666679999876433
Q ss_pred cccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 566 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|++.+++.+||+++++.|+++++
T Consensus 334 ----------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 334 ----------------QSDCFRIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp ----------------SSCEEEEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred ----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 235899999999999999999999998865
No 32
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.96 E-value=4.1e-29 Score=275.19 Aligned_cols=392 Identities=11% Similarity=-0.001 Sum_probs=249.5
Q ss_pred HHHHHHHHHHh--CCCCCCc-hhHHHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhc--CCCCCCCCCCCCCCCCc
Q 006746 73 LQQSLTEFTKA--YPQYFDT-YQIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQES--SPSHLRPSLPSQNLDIP 147 (632)
Q Consensus 73 l~~a~~~F~~~--~p~y~~~-~~~d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~--~~~~~~~~~P~~~~~~p 147 (632)
.++...+.+.. .|+.+.+ .++.++|+ +|+.+ +..+||||+++|++|..|++++.. +..... | .+
T Consensus 45 ~~~~~~~~~~~~~lp~~g~~~~~i~~~~~-~~~~~--~~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~---~-----~~ 113 (456)
T 2z67_A 45 YLKEIEDVFNHRKIPENGIDDEKIKLFLK-FLSMM--DTDKDPKSVRIGEREARTYSKIHEELSSGFCH---G-----IG 113 (456)
T ss_dssp HTHHHHHHHHHCSCCSSCCCHHHHHHHHH-HHHTT--BGGGCTTCEECSSCCCCCSCHHHHHHTTTCTT---C-----BS
T ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHH-HHHhc--cccccccccccccccccccccccCccccccCC---C-----cc
Confidence 33334444432 4655543 56888886 69988 568999999999999998887653 111000 0 00
Q ss_pred cccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHH-HHHHHHhhC-CCCCCCeEE-Eecccc
Q 006746 148 FFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTS-AFKLLAESY-PFMSVKNLL-TVYDYE 224 (632)
Q Consensus 148 ~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~-al~lv~~sl-~~~~gd~il-t~~d~~ 224 (632)
.. -.+...|+. ...+....++++++|+.+++++|++++ ++||+|+|+ ++-+++.++ .+.++++|+ +..+|+
T Consensus 114 ~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~g~~~~---~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~ 187 (456)
T 2z67_A 114 RS-GNLVDPQPK--ASGASIMYALTNKILESFFKQLGLNVH---AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHK 187 (456)
T ss_dssp BT-TBTTSCCTT--BHHHHHHHHHHHHHHHHHHHHTTCCCE---EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCH
T ss_pred HH-HHHHhhCcc--cccCcHHHHHHHHHHHHHHHHcCCCCC---EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 00 001112331 111112457889999999999999853 999999995 443233332 122566666 445666
Q ss_pred chhhHHHHHHHHhcCCEEEEEecc--CCccccCHHHHHHHH-HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC
Q 006746 225 SEAVEAMIRTSEKRGARVMSAEFS--WPRLRINSEKLRKMV-VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN 300 (632)
Q Consensus 225 s~~v~~~~~~a~~~G~~v~~v~~~--~~~~~i~~~~l~~~i-~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~ 300 (632)
+ + ...++..|++++.++.. ..++.+|+++|+++| ++.. +.++.+++++..+|.||...|++ |.++|+++
T Consensus 188 s--~---~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~--~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~ 260 (456)
T 2z67_A 188 S--P---IKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIE--LGNRPCVLSTLTFFPPRNSDDIVEIAKICENY 260 (456)
T ss_dssp H--H---HHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHH--TTCCEEEEEESSCCTTBCCCCHHHHHHHHHHH
T ss_pred H--H---HHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhh--CCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHc
Confidence 4 2 34556789999999873 256789999999999 4310 01357777888889999999999 99999999
Q ss_pred CcEEEEecc---ccCCCCCCCCCCCCC--CCcEEEEccccccCCCCCceEEEEEeC-CCccccCCCCCCCceeecccccc
Q 006746 301 DWHILIDAC---ALGPKDMDSFGLSLV--RPDFLICSFYQIFGENPSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQ 374 (632)
Q Consensus 301 g~~vlvDaa---q~~g~~m~~ldls~~--~~Df~~~S~hK~~G~~P~G~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~ 374 (632)
|++++||+| |..|. .+++++.+ ++|++++|+||+++. |.|+|+|++|+ +.+..+.+.+.|+.
T Consensus 261 g~~v~vD~A~~~~~~g~--~~~~~~~~~~~~D~~~~s~hK~~~~-p~g~G~l~~~~~~~~~~l~~~~~g~~--------- 328 (456)
T 2z67_A 261 DIPHIINGAYAIQNNYY--LEKLKKAFKYRVDAVVSSSDKNLLT-PIGGGLVYSTDAEFIKEISLSYPGRA--------- 328 (456)
T ss_dssp TCCEEEECTTTTTCHHH--HHHHHHHHTSCCSEEEEEHHHHHCC-CSSCEEEEESCHHHHHHHHTTSCSCB---------
T ss_pred CCcEEEECcchHHHHHh--hHHHHHhhCCCCCEEEEcCCCCcCC-CCCeEEEEEcCHHHHhhcCcCCCCCC---------
Confidence 999999965 44443 24444334 799999999997554 89999999964 55555554443310
Q ss_pred cccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhH
Q 006746 375 LWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRG 454 (632)
Q Consensus 375 ~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a 454 (632)
.++ + +.++. .+
T Consensus 329 -------------------------~~~-------------------~-~~~~~------------------------aa 339 (456)
T 2z67_A 329 -------------------------SAT-------------------P-VVNTL------------------------VS 339 (456)
T ss_dssp -------------------------CSH-------------------H-HHHHH------------------------HH
T ss_pred -------------------------CCC-------------------H-HHHHH------------------------HH
Confidence 000 0 11121 56
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhC
Q 006746 455 LDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRE 534 (632)
Q Consensus 455 Ld~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~ 534 (632)
+..+...|++.+.++.+.++++|.+.|.++.+.. .+.+++|. ++++|++... + . ...+.+.+.+.
T Consensus 340 l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-----g~~v~~~~------~~v~~~~~~~-~--~-~~~l~~~L~~~ 404 (456)
T 2z67_A 340 LLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKT-----GGKFLDVE------SPIASCISVN-S--D-PVEIAAKLYNL 404 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SCCBCCCC------CSSEEEEECS-S--C-HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----CCEecCCC------CeEEEEEecc-c--H-HHHHHHHHHHc
Confidence 6666667899999999999999999999872110 35555552 7788887311 1 1 34455545556
Q ss_pred CcE-EccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 535 NIS-LSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 535 gI~-lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
||. +|... ..+ .+ . +..|. ....+.||+|+++++|.|||+++++.|++++
T Consensus 405 gi~~~rv~~--~~g---~f--------~-G~~~~------------~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 405 RVTGPRGIK--KTD---HF--------G-NCYLG------------TYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp TEESCEEEC--TTC---HH--------H-HTCSS------------CCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred CCCcceEEe--ecC---cc--------c-ccccc------------ccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 651 22210 000 00 0 11111 1134699999999999999999999998764
No 33
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.96 E-value=4.7e-27 Score=250.20 Aligned_cols=362 Identities=14% Similarity=0.086 Sum_probs=261.3
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE 187 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~ 187 (632)
...||+..+-..++..+++++.+.... + +.....+.+++.|+.++++++.++
T Consensus 22 ~~~~~~~p~p~~~~~~v~~a~~~~~~~--------------------------~--~~~~~~~~~~~l~~~la~~~~~~~ 73 (393)
T 3kgw_A 22 PTRLLLGPGPSNLAPRVLAAGSLRMIG--------------------------H--MQKEMLQIMEEIKQGIQYVFQTRN 73 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTCCCCC--------------------------T--TSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ccceeccCCCCCCCHHHHHHhcccccC--------------------------c--ccHHHHHHHHHHHHHHHHHhCCCC
Confidence 355888888889999999997542210 0 000123667899999999999974
Q ss_pred CCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhc
Q 006746 188 NDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 266 (632)
Q Consensus 188 ~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~ 266 (632)
+..|+||+|+|+|+.+++.++ +++||+|++. +.|++. .+...++..|++++.++++ +++.+|+++|+++|++.
T Consensus 74 -~~~v~~~~gg~~al~~~~~~~-~~~gd~vl~~~~~~~~~---~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i~~~ 147 (393)
T 3kgw_A 74 -PLTLVVSGSGHCAMETALFNL-LEPGDSFLTGTNGIWGM---RAAEIADRIGARVHQMIKK-PGEHYTLQEVEEGLAQH 147 (393)
T ss_dssp -SEEEEESCCTTTHHHHHHHHH-CCTTCEEEEEESSHHHH---HHHHHHHHTTCEEEEEECC-TTCCCCHHHHHHHHHHH
T ss_pred -CcEEEEeCCcHHHHHHHHHhc-CCCCCEEEEEeCCchhH---HHHHHHHHcCCceEEEeCC-CCCCCCHHHHHHHHhhC
Confidence 346999999999999999999 8999997654 555432 2245667889999999987 55679999999999872
Q ss_pred CcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCceE
Q 006746 267 GKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFG 345 (632)
Q Consensus 267 ~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G 345 (632)
++++|++++.+|+||..+|++ |.++|+++|+++++|+++..|. .++++..+++|++++|+||+++. |.|+|
T Consensus 148 -----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~--~~~~~~~~~~d~~~~s~sK~~~~-~~g~g 219 (393)
T 3kgw_A 148 -----KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGG--VPIYMDQQGIDIMYSSSQKVLNA-PPGIS 219 (393)
T ss_dssp -----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTT--SCCCTTTTTCCEEEEESSSTTCC-CSSCE
T ss_pred -----CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccC--cccchhhcCCCEEEecCcccccC-CCcee
Confidence 248999999999999999999 9999999999999999998776 47788888999999999995543 78999
Q ss_pred EEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhh
Q 006746 346 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 425 (632)
Q Consensus 346 ~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~ 425 (632)
+++++++.++.+.+...+ ... ++.. + ........+.. .. ....+++++..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~-~~~-------~~~~-------~------~~~~~~~~~~~-~~------~~~~~~~~~~~~~ 271 (393)
T 3kgw_A 220 LISFNDKAKYKVYSRKTK-PVS-------FYTD-------I------TYLAKLWGCEG-ET------RVIHHTTPVTSLY 271 (393)
T ss_dssp EEEECHHHHHHHHTCSSC-CSC-------STTC-------H------HHHHHHTTCSS-SC------CCCCCCCCHHHHH
T ss_pred EEEECHHHHHHHhccCCC-CCc-------eeec-------H------HHHHHhhhhcc-cc------CCCCCCCCHHHHH
Confidence 999999887766543211 000 0000 0 00000000000 00 0024556666667
Q ss_pred HhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCC
Q 006746 426 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 505 (632)
Q Consensus 426 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~ 505 (632)
++. .+++.+.+.|++.+.++.+.+.+++.+.|.++ | ++++.+.....
T Consensus 272 a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~~~~~ 318 (393)
T 3kgw_A 272 CLR------------------------ESLALIAEQGLENCWRRHREATAHLHKHLQEM------G---LKFFVKDPEIR 318 (393)
T ss_dssp HHH------------------------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT------T---CCBSSSSGGGB
T ss_pred HHH------------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc------C---CeeccCChhhc
Confidence 665 78888888899999999999999999999987 3 34444432222
Q ss_pred CCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCc
Q 006746 506 RGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGIT 584 (632)
Q Consensus 506 rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 584 (632)
.+.++.|.+.+ + ++...+.+ |++++||.++.|..+ ...+
T Consensus 319 ~~~~~~~~~~~--~--~~~~~~~~~l~~~~gi~v~~g~~~------------------------------------~~~~ 358 (393)
T 3kgw_A 319 LPTITTVTVPA--G--YNWRDIVSYVLDHFSIEISGGLGP------------------------------------TEER 358 (393)
T ss_dssp CSSEEEEECCT--T--BCHHHHHHHHHHHHCEECBCCCGG------------------------------------GTTT
T ss_pred CCeEEEEeCCC--C--CCHHHHHHHHHHhCCEEEeCCccc------------------------------------CCCC
Confidence 34566677653 1 45666654 555559999877311 1235
Q ss_pred EEEEcc-CCCCCHHHHHHHHHHHHHhhhh
Q 006746 585 VVTASL-GYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 585 ~VRvSl-g~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.||+|+ ++.+|.+|++++++.|+++++.
T Consensus 359 ~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 359 VLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp EEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 999998 7777999999999999998864
No 34
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=9.9e-27 Score=246.40 Aligned_cols=351 Identities=13% Similarity=0.042 Sum_probs=245.4
Q ss_pred CCceEeec-CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHH-HHHHcC
Q 006746 107 SNHTCLDY-FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKR-IMDFLN 184 (632)
Q Consensus 107 ~~~vyLD~-ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~-ia~~l~ 184 (632)
++.+|||+ ++.++.++.+++++.+.+.... .. ..+|.+ . ++......+.+.|+. +++++|
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~--------~~-------~~~~~~-~--~~~~~~~~~~~l~~~~la~~~~ 68 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYS--------VC-------DFCTTG-R--LDEIKTPPIHDFIHNQLPKFLG 68 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC--------------------------------------CCHHHHHHTHHHHHTT
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcc--------cC-------Cccccc-c--chhhHHHHHHHHHHHHHHHHcC
Confidence 56899999 6688999999999887653210 00 001100 0 111123456789999 999999
Q ss_pred CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe--ccCCccccCHHHHHH
Q 006746 185 ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE--FSWPRLRINSEKLRK 261 (632)
Q Consensus 185 a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~--~~~~~~~i~~~~l~~ 261 (632)
++ .|+||+|+|+|+.+++.++ +++||+|++. ..|++ .. ..++..|++++.++ .+ +++.+|+++|++
T Consensus 69 ~~----~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~-~~----~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~ 137 (371)
T 2e7j_A 69 CD----VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYS-SY----VAAERAGLNIALVPKTDY-PDYAITPENFAQ 137 (371)
T ss_dssp SS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HH----HHHHHTTCEEEEECCCCT-TTCCCCHHHHHH
T ss_pred CC----EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchH-HH----HHHHHcCCeEEEeecccC-CCCCcCHHHHHH
Confidence 86 6999999999999999998 7899997755 56664 22 23567899999999 76 457799999999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCC
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGEN 340 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~ 340 (632)
+|++... .++++++++++.+|+||..+|++ |.++|+++|+++++|+++..+. .++++..+++|++++|+||+++.
T Consensus 138 ~l~~~~~-~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~di~~~s~sK~~~~- 213 (371)
T 2e7j_A 138 TIEETKK-RGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGR--MPVSLKEIGADFIVGSGHKSMAA- 213 (371)
T ss_dssp HHHHHTT-TSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTT--BCCCHHHHTCSEEEEEHHHHSSC-
T ss_pred HHHhhcc-cCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCC--CCCChhhcCCCEEEecCCcCCCC-
Confidence 9974311 12468999999999999999999 9999999999999999998876 35667677899999999996664
Q ss_pred CCceEEEEEeCCCccc-cCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCc
Q 006746 341 PSGFGCLFVKKSTVPI-LVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKL 419 (632)
Q Consensus 341 P~G~G~L~Vr~~~~~~-L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~ 419 (632)
|.|+|+++++++.++. +.+...++... ..+ + .|++
T Consensus 214 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~---~----------------~~~~ 249 (371)
T 2e7j_A 214 SGPIGVMGMKEEWAEIVLRRSEKYKNKE-------------------------VEL---L----------------GCTA 249 (371)
T ss_dssp CSSCEEEEECTTTTTTTTCBCSSCTTSB-------------------------GGG---T----------------TCCC
T ss_pred CCCcEEEEEechhhhhhccccccCcccc-------------------------ccc---c----------------cCCc
Confidence 7799999999988776 65533221100 000 1 2223
Q ss_pred ccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH--HHHHHHHHHHHHccCCCCCCCCCcEEE
Q 006746 420 EQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG--RCLINWLVNALMKLQHPNTEGNALVKI 497 (632)
Q Consensus 420 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~--~~L~~~L~~~L~~l~h~~~~G~p~v~I 497 (632)
+...+.++. .+++++.. .+.+|. +.+.+++.+.|.++ | +++
T Consensus 250 ~~~~~~a~~------------------------~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~------~---~~~ 292 (371)
T 2e7j_A 250 RGATIITLM------------------------ASFPHVRE----RIKRWDEEVEKARRFAAEMEKL------G---IKQ 292 (371)
T ss_dssp CSHHHHHHH------------------------HHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT------T---CEE
T ss_pred CHHHHHHHH------------------------HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc------C---cEE
Confidence 333344443 67776654 667888 89999999999886 3 566
Q ss_pred ECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccc
Q 006746 498 YGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKD 577 (632)
Q Consensus 498 ygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 577 (632)
++|.. .+++++.|.+. +...+.+.+.++||.++. . ... .. .
T Consensus 293 ~~~~~--~~~~~~~~~~~-------~~~~~~~~l~~~gi~~~~-~-------~~~-------~~-~-------------- 333 (371)
T 2e7j_A 293 LGDNP--HNHDLMFFHAE-------VLYEISKKAKGGRFFLYR-E-------LKS-------RK-I-------------- 333 (371)
T ss_dssp ESSSS--CCSSEEEEECH-------HHHHHHHHSSSGGGHHHH-H-------HHH-------TT-E--------------
T ss_pred ecCCC--ccCceEEEECC-------CHHHHHHHHHHCCEEEEe-c-------ccc-------cc-c--------------
Confidence 76632 25788888764 234455555567877642 0 000 00 0
Q ss_pred cCCCCCcEEE-EccCCC-CCHHHHHHHHHHHHHhhh
Q 006746 578 KANLGITVVT-ASLGYL-ANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 578 ~~~~~~~~VR-vSlg~~-~t~eDV~rlv~~l~~~l~ 611 (632)
.+...+.|| +|++.+ ++.+||+++++.|+++++
T Consensus 334 -~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~ 368 (371)
T 2e7j_A 334 -HGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIE 368 (371)
T ss_dssp -ECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred -cCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHH
Confidence 011246899 999999 999999999999999875
No 35
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.95 E-value=6.5e-27 Score=247.07 Aligned_cols=348 Identities=13% Similarity=0.124 Sum_probs=240.1
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
.+|+++.|..++|+.+++++.+.+... . +| . .+......++....+.++++|+.+++++|++ +
T Consensus 3 ~~~~~~~g~~~~p~~v~~a~~~~~~~~-~-~~----~----------~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~ 65 (360)
T 1w23_A 3 QVFNFNAGPSALPKPALERAQKELLNF-N-DT----Q----------MSVMELSHRSQSYEEVHEQAQNLLRELLQIP-N 65 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSS-T-TS----S----------SCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-T
T ss_pred ceEeecCCCcCCCHHHHHHHHHHhhhh-c-cc----c----------ccccccCCCCHHHHHHHHHHHHHHHHHhCCC-C
Confidence 589999999999999999988765421 0 01 0 0000000001113467889999999999996 2
Q ss_pred CccEEEeCCH-HHHHHHHHhhCCC--CCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH-HH
Q 006746 189 DYGMVFTANR-TSAFKLLAESYPF--MSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK-MV 263 (632)
Q Consensus 189 ey~vvft~na-T~al~lv~~sl~~--~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~-~i 263 (632)
.++|+||+|+ |+|+.+++.++-. ++|+.|++. +.|.+ ...++..| +++.++++.+++.+++++|++ ++
T Consensus 66 ~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~------~~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i 138 (360)
T 1w23_A 66 DYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA------LKEAKLLG-ETHIAASTKANSYQSIPDFSEFQL 138 (360)
T ss_dssp TEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH------HHHHHTTS-EEEEEEECGGGTSCSCCCGGGCCC
T ss_pred CceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH------HHHHHHhC-CeEEeecccccCcCCccchHhhcc
Confidence 3489999999 9999999988743 234455543 34432 22356789 999999873355678888877 66
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG 343 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G 343 (632)
++ +++++++++.+|+||..+| +| ++++|+++++|+++..+. .++++..+ |++++|+||+|| |.|
T Consensus 139 ~~------~~k~v~~~~~~nptG~~~~-~i---~~~~~~~li~D~a~~~~~--~~~~~~~~--di~~~s~sK~~~--~~G 202 (360)
T 1w23_A 139 NE------NDAYLHITSNNTIYGTQYQ-NF---PEINHAPLIADMSSDILS--RPLKVNQF--GMIYAGAQKNLG--PSG 202 (360)
T ss_dssp CT------TEEEEEEESEETTTTEECS-SC---CCCCSSCEEEECTTTTTS--SCCCGGGC--SEEEEETTTTTS--CTT
T ss_pred CC------CCCEEEEeCCCCCcceecc-cc---cccCCceEEEechhhcCC--CCcCcccC--CEEEEEcccccC--CCC
Confidence 43 3699999999999999998 43 347999999999999886 46677654 999999999999 779
Q ss_pred eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccch
Q 006746 344 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 423 (632)
Q Consensus 344 ~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~ 423 (632)
+|+++++++.++.+.+.. ++.++ + ... ...+. ..|+++++.
T Consensus 203 ~G~~~~~~~~~~~~~~~~-~~~~~--------~-----------------~~~-~~~~~------------~~~~~~~~~ 243 (360)
T 1w23_A 203 VTVVIVKKDLLNTKVEQV-PTMLQ--------Y-----------------ATH-IKSDS------------LYNTPPTFS 243 (360)
T ss_dssp CEEEEEEHHHHCSCCTTC-CGGGC--------H-----------------HHH-HHTTT------------CSSCCCHHH
T ss_pred cEEEEEcHHHHhhcccCC-cchhh--------h-----------------hhh-hhccC------------CCCCCCHHH
Confidence 999999998876665432 10000 0 000 00000 124455555
Q ss_pred hhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCC
Q 006746 424 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPK 501 (632)
Q Consensus 424 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~-Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~ 501 (632)
+.++. .+|+.+.+. |++.+.++.+.+.+++.+.|.++ +.+ .++.+.
T Consensus 244 ~~~~~------------------------~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~~~ 291 (360)
T 1w23_A 244 IYMLR------------------------NVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES--------NGFYVGHAEK 291 (360)
T ss_dssp HHHHH------------------------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT--------TTSSEESSCG
T ss_pred HHHHH------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc--------cCcccccCCc
Confidence 66665 788888776 68999999999999999999987 322 333211
Q ss_pred CCCCCCc-EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCC
Q 006746 502 IRFDRGP-ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 580 (632)
Q Consensus 502 ~~~~rg~-ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 580 (632)
..+++ ++.|.+.+. .+...+.+.+.++||.++.|..
T Consensus 292 --~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~~~~~~~------------------------------------- 328 (360)
T 1w23_A 292 --GSRSLMNVTFNLRNE----ELNQQFLAKAKEQGFVGLNGHR------------------------------------- 328 (360)
T ss_dssp --GGBCSSEEEEECSSH----HHHHHHHHHHHHTTEESCBCCT-------------------------------------
T ss_pred --hhccCcEEEEEcCCC----ccHHHHHHHHHHCCeeeecCCC-------------------------------------
Confidence 12445 888887541 2334444445668988765420
Q ss_pred CCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 581 LGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 581 ~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|++.+++.+||+++++.|++++.
T Consensus 329 -~~~~iRis~~~~~~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 329 -SVGGCRASIYNAVPIDACIALRELMIQFKE 358 (360)
T ss_dssp -TTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -CCCeEEEEecCCCCHHHHHHHHHHHHHHHh
Confidence 135899999999999999999999998864
No 36
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=3e-25 Score=248.02 Aligned_cols=372 Identities=10% Similarity=-0.013 Sum_probs=233.1
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccc-cccccchhHHHHHHHHHHHHHcCCC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~-~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
...||||..+++.|..++..+.... .|+... +..+....++++++++.+++++|++
T Consensus 108 ~p~~~~~~~~~~~~~~~~~~~l~~~-----------------------~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~ 164 (515)
T 2jis_A 108 HPRFFNQLFSGLDPHALAGRIITES-----------------------LNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS 164 (515)
T ss_dssp STTEESSSCCCCCHHHHHHHHHHHH-----------------------HCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCCeEEEeeCCCCHHHHHHHHHHHH-----------------------hccCCCchhhchHHHHHHHHHHHHHHHHhCCC
Confidence 4579999999999998887543210 111110 0011123577889999999999998
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCC------CC-CCC------eEEEe-ccccchhhHHHHHHHHhcCC---EEEEEeccC
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYP------FM-SVK------NLLTV-YDYESEAVEAMIRTSEKRGA---RVMSAEFSW 249 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~------~~-~gd------~ilt~-~d~~s~~v~~~~~~a~~~G~---~v~~v~~~~ 249 (632)
++ .++||+|+|+|+.+++.... ++ +|+ +|+++ ..|++ + ...++..|. +++.+|.+
T Consensus 165 ~~--~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s--~---~~~~~~~g~g~~~v~~v~~~- 236 (515)
T 2jis_A 165 SG--DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS--I---QKGAAFLGLGTDSVRVVKAD- 236 (515)
T ss_dssp SC--EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH--H---HHHHHHTTSCGGGEEEECBC-
T ss_pred CC--CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH--H---HHHHHHcCCCCCcEEEEecC-
Confidence 44 79999999999877766642 12 464 56654 45664 2 233445566 89999987
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC-----CCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG-----LSL 323 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld-----ls~ 323 (632)
+++.+++++|+++|++......++++|++++.+|.||...|++ |.++|+++|++++||+++.++. ...+ +..
T Consensus 237 ~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~--~~~~~~~~~~~g 314 (515)
T 2jis_A 237 ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSV--LLSQTHRHLLDG 314 (515)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGG--GGCTTTGGGGTT
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHH--HhChhhHhhcCC
Confidence 5788999999999986321122478999999999999999999 9999999999999999988765 2332 444
Q ss_pred C-CCcEEEEccccccCCCCCceEEEEEeCC--Ccccc---CCCCC-CCceeecccccccccccccCCCCCCccccchhhh
Q 006746 324 V-RPDFLICSFYQIFGENPSGFGCLFVKKS--TVPIL---VDNTS-SGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 324 ~-~~Df~~~S~hK~~G~~P~G~G~L~Vr~~--~~~~L---~~~~~-gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
+ ++|++++++||++|. |.|+|++++|++ .+..+ .+.+. ++.... ...|
T Consensus 315 ~~~aD~v~~s~hK~l~~-p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~----~~~~-------------------- 369 (515)
T 2jis_A 315 IQRADSVAWNPHKLLAA-GLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFY----DVAL-------------------- 369 (515)
T ss_dssp GGGCSEEEECTTSTTCC-CSCCEEEEESCCSCHHHHHHCC---------CCS----CGGG--------------------
T ss_pred CccCCEEEECcccccCC-CCCeeEEEEeChHHHHHHHhcCCchhccCCcccc----cccC--------------------
Confidence 4 889999999998876 889999999987 43321 12221 211000 0000
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
+.++.++... ++.+ ..++- .++..+...|++.+.+|...++++
T Consensus 370 --~~~~~~~~~~-----rr~~------al~~~------------------------~~l~~lg~~g~~~~~~~~~~~a~~ 412 (515)
T 2jis_A 370 --DTGDKVVQCG-----RRVD------CLKLW------------------------LMWKAQGDQGLERRIDQAFVLARY 412 (515)
T ss_dssp --CCGGGCSCSS-----CCCC------HHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCC-----Cccc------HHHHH------------------------HHHHHHhHHHHHHHHHHHHHHHHH
Confidence 0111111100 0000 01111 345555556889999999999999
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccC--CCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDW--KREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~--~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
+.+.|.++ |.++++++. +.++|+|.+.+. +|. .+...+.+.+++. +..
T Consensus 413 l~~~L~~~--------~g~~~~~~~----~~~~v~f~~~p~~~~~~-~~~~~~~~~l~~~----------~~~------- 462 (515)
T 2jis_A 413 LVEEMKKR--------EGFELVMEP----EFVNVCFWFVPPSLRGK-QESPDYHERLSKV----------APV------- 462 (515)
T ss_dssp HHHHHHTS--------TTEEESSCC----SSSEEEEEECCGGGTTC-TTSTTHHHHHHTH----------HHH-------
T ss_pred HHHHHhcC--------CCEEEeCCC----CeeEEEEEEeCcccccc-ccchhHHHHHHHH----------HHH-------
Confidence 99999987 679998863 357788977431 110 0111111111100 000
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHHhhh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.+.+.+..|...... ....++||+|+ ++++|.+||+++++.|+++++
T Consensus 463 l~~~l~~~G~~~~~~~~~-------~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 463 LKERMVKEGSMMIGYQPH-------GTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp HHHHHHHHTSCEEEEEEE-------TTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCEEEEEEEE-------CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 001111112111100000 01236899999 899999999999999998764
No 37
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.94 E-value=3.4e-26 Score=250.07 Aligned_cols=319 Identities=14% Similarity=0.073 Sum_probs=216.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.++++++|+.+++++|++++ ++++|.|+|.+++.+..++.+++||+|+++ ..|++ ....+...++..|++++.++.
T Consensus 107 ~~~~~~~~~~la~~~g~~~~--~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s-~~~~~~~~a~~~G~~v~~v~~ 183 (438)
T 1wyu_A 107 LQATFEYQTMIAELAGLEIA--NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPE-YRAVLRAYLEAVGAKLLTLPL 183 (438)
T ss_dssp HHHHHHHHHHHHHHHTSSEE--CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHH-HHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCcc--ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHh-HHHHHHHHHHHCCCEEEEEcC
Confidence 47889999999999999865 588999999544444444345789997755 56665 444445667789999999987
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecc-ccCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDAC-ALGPKDMDSFGLSLVR 325 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaa-q~~g~~m~~ldls~~~ 325 (632)
+ ++.+++++ |++ +++++++++. |.||...|++ |+++||++|+++++|+. ++.|. ...+ ..++
T Consensus 184 ~--~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~--~~~~-~~~g 247 (438)
T 1wyu_A 184 E--GGRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGV--LKPP-GAYG 247 (438)
T ss_dssp B--TTBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGT--BCCH-HHHT
T ss_pred c--CCccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccC--cCCC-ccCC
Confidence 3 45666555 333 3699999998 9999999999 99999999999998765 54443 1222 4578
Q ss_pred CcEEEEcccc-----ccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 326 PDFLICSFYQ-----IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 326 ~Df~~~S~hK-----~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
+|++++|+|| ++|. | |+|+++++++.++.+.+...|+.++.. ....|.. .+.+.+ ...+++.
T Consensus 248 ~D~~~~s~kk~~~~~~~~G-p-~~G~l~~~~~~~~~l~~~~~g~~~~~~--~~~~~~~------~l~~~~---~~~r~~~ 314 (438)
T 1wyu_A 248 ADIAVGDGQSLGLPMGFGG-P-HFGFLATKKAFVRQLPGRLVSETVDVE--GRRGFIL------TLQARE---QYIRRAK 314 (438)
T ss_dssp CSEEEEECTTTTCCCGGGC-S-CCEEEEECGGGGGGCCSCCEEEEEBTT--SCEEEEE------CCGGGS---HHHHGGG
T ss_pred CCEEEECCcccCCCccCCC-C-CeeEEEEcHHHHHhCCCceeccccccC--CCcceee------eccccc---cccchhc
Confidence 9999999887 4443 7 999999999887777544433222110 0000100 000000 0001233
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhH--HHHHHhhCHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRG--LDQVDSLGLTMISRRGRCLINWLV 478 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a--Ld~~~~~Gl~~I~~r~~~L~~~L~ 478 (632)
+|.++... ..+.++. ++ +..+...|++.+.+|.+.+++++.
T Consensus 315 ~t~~~~~~-------------~~~~a~~------------------------aa~~l~~~~~~g~~~~~~~~~~~~~~l~ 357 (438)
T 1wyu_A 315 AKSNITTN-------------AQLTALM------------------------GAMYLAALGPEGLREVALKSVEMAHKLH 357 (438)
T ss_dssp SSCCCCSC-------------CHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccch-------------HHHHHHH------------------------HHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 44333111 2233332 34 666666789999999999999999
Q ss_pred HHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEE--ccCccCChHHHhHHHHhh
Q 006746 479 NALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISL--SYGSLHHIWFSDKYQKEK 556 (632)
Q Consensus 479 ~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~l--r~G~~c~~~~~~~~~~~~ 556 (632)
+.|.++ |.++++++. ..-.++.|.+. .+...+.+.+.++||.+ +.|.+|
T Consensus 358 ~~L~~~--------~g~~~~~~~---~~~~~~~~~~~------~~~~~~~~~L~~~gi~v~~~~~~~~------------ 408 (438)
T 1wyu_A 358 ALLLEV--------PGVRPFTPK---PFFNEFALALP------KDPEAVRRALAERGFHGATPVPREY------------ 408 (438)
T ss_dssp HHHTTS--------TTCEECSCS---SBCSEEEEECS------SCHHHHHHHHHHTTCCCCEECCTTS------------
T ss_pred HHHhcC--------CCeEECCCC---CeEEEEEEeCC------CCHHHHHHHHHHCCceecccccccc------------
Confidence 999987 568888763 23345555432 35666666555679988 334211
Q ss_pred hhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 557 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 557 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+.+.||+|++.++|.+||+++++.|++++
T Consensus 409 -------------------------~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 409 -------------------------GENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp -------------------------CSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred -------------------------CCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 24699999999999999999999998875
No 38
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.94 E-value=3.2e-25 Score=238.67 Aligned_cols=351 Identities=12% Similarity=0.079 Sum_probs=240.0
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
...+|+++.|..++|+.+++++.++.... . ... + ++....+.++++|+.+++++|++
T Consensus 38 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~-------------~------~~~--~--~~~~~~~~~~~~~~~la~~~g~~ 94 (398)
T 2fyf_A 38 KPRDGRFGSGPSKVRLEQLQTLTTTAAAL-------------F------GTS--H--RQAPVKNLVGRVRSGLAELFSLP 94 (398)
T ss_dssp SCSSCBCCSSSCCCCHHHHHGGGTTTTTT-------------T------TSC--T--TSHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCccccCCCCCCCHHHHHHHhhcCCCc-------------c------CcC--c--CCHHHHHHHHHHHHHHHHHhCCC
Confidence 34678999999999999999976531100 0 000 0 11112467889999999999997
Q ss_pred CCCccEEE-eCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhc--CCEEEEEeccCCccccCHHHHHHHH
Q 006746 187 ENDYGMVF-TANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKR--GARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 187 ~~ey~vvf-t~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~--G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
+ +++|+| |+|+|+|+++++.++ +++| .+++...+++. .+ ...+... |++++.++++ . +.+...+ +
T Consensus 95 ~-~~~i~~~t~g~t~al~~~~~~l-~~~g-v~~v~~~~~~~--~~-~~~~~~~~~g~~~~~v~~~-~-g~~~~~~----i 162 (398)
T 2fyf_A 95 D-GYEVILGNGGATAFWDAAAFGL-IDKR-SLHLTYGEFSA--KF-ASAVSKNPFVGEPIIITSD-P-GSAPEPQ----T 162 (398)
T ss_dssp T-TCEEEEEETCHHHHHHHHHHHT-CSSC-EEEEECSHHHH--HH-HHHHHHCTTSCCCEEEECC-T-TCCCCCC----C
T ss_pred C-CceEEEeCCchhHHHHHHHHHh-cCCC-eEEEeCCHHHH--HH-HHHHHHhCCCCceEEEecC-C-CCCCCcc----c
Confidence 3 347898 999999999999998 6666 22223333321 11 2234555 8899999886 2 2222111 2
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCC
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPS 342 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~ 342 (632)
+ .++++|++++.+|+||..+|++ |.++ +|+++++|+++..+. .++++. ++|++++|+||++|. |.
T Consensus 163 ~------~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~--~~~~~~--~~di~~~s~sK~~~~-~g 228 (398)
T 2fyf_A 163 D------PSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGG--LPVDIA--ETDAYYFAPQKNFAS-DG 228 (398)
T ss_dssp C------TTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTT--SCCCGG--GCSEEEECTTSTTCS-CS
T ss_pred c------CCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCC--cccCcc--cCcEEEEecCcccCC-CC
Confidence 2 2468999999999999999999 8776 899999999999886 466664 489999999999995 55
Q ss_pred ceEEEEEeCCCccccCCCC-CCCceeecccccccccccccCCCCCCccccchhhhh-hhccccCCCccchhhhhhcCCcc
Q 006746 343 GFGCLFVKKSTVPILVDNT-SSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE-KVAATNTFSGPMSIEMRQSGKLE 420 (632)
Q Consensus 343 G~G~L~Vr~~~~~~L~~~~-~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e-~e~gt~~f~~~~~~~~~~~Gt~~ 420 (632)
|+|+++++++.++.++... .+..+ ..+|... .... ...+. ..++++
T Consensus 229 g~g~l~~~~~~~~~l~~~~~~~~~~------~~~~~~~--------------~~~~~~~~~~------------~~~t~~ 276 (398)
T 2fyf_A 229 GLWLAIMSPAALSRIEAIAATGRWV------PDFLSLP--------------IAVENSLKNQ------------TYNTPA 276 (398)
T ss_dssp SEEEEEECHHHHHHHHHHHHTTCCC------CGGGCHH--------------HHHHHHTTTC------------CSSCCC
T ss_pred ceEEEEECHHHHHHhhcccccCCCC------CcEEehH--------------HHhhhcccCC------------CCCCCC
Confidence 7999999998776553210 00000 0011000 0000 00010 134556
Q ss_pred cchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEEC
Q 006746 421 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG-LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYG 499 (632)
Q Consensus 421 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G-l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iyg 499 (632)
++.+.++. .+|+.+.+.| ++.+.++.+.+.+++.+.|.++ |.++++.
T Consensus 277 ~~~~~a~~------------------------~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~--------~g~~~~~ 324 (398)
T 2fyf_A 277 IATLALLA------------------------EQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER--------PYTTPFV 324 (398)
T ss_dssp HHHHHHHH------------------------HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS--------TTEEESC
T ss_pred HHHHHHHH------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc--------CCceecc
Confidence 66666665 8898888777 9999999999999999999987 5688875
Q ss_pred CCCCCCCCc-EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccccc
Q 006746 500 PKIRFDRGP-ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 578 (632)
Q Consensus 500 p~~~~~rg~-ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 578 (632)
+. +..+++ ++.|.+.+ | ++...+.+.+.++||.++.|.
T Consensus 325 ~~-~~~~~~~~~~~~~~~--~--~~~~~l~~~L~~~gI~v~~g~------------------------------------ 363 (398)
T 2fyf_A 325 TD-PGLRSQVVGTIDFVD--D--VDAGTVAKILRANGIVDTEPY------------------------------------ 363 (398)
T ss_dssp CS-GGGBCSSEEEEEECT--T--SCHHHHHHHHHHTTCBCCSCC------------------------------------
T ss_pred CC-hhhcCCcEEEEECCC--C--CCHHHHHHHHHHCCcEEecCc------------------------------------
Confidence 31 112566 88998853 2 566677666666699998651
Q ss_pred CCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 579 ANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 579 ~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+.+.||+|++.++|.|||+++++.|+++++
T Consensus 364 ~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 364 RKLGRNQLRVAMFPAVEPDDVSALTECVDWVVE 396 (398)
T ss_dssp TTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 011236899999999999999999999998864
No 39
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=3.8e-24 Score=227.47 Aligned_cols=334 Identities=13% Similarity=-0.032 Sum_probs=237.6
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
..||.++...+. +.+++++.+.+... + .++.. |. ...+..+++++.+++++|++++
T Consensus 32 ~~~~~~~~~~~~-~~v~~a~~~~~~~~--------~-----------~~~~~---~~-~~~~~~~~l~~~la~~~~~~~~ 87 (397)
T 3f9t_A 32 GNIFGSMCSNVL-PITRKIVDIFLETN--------L-----------GDPGL---FK-GTKLLEEKAVALLGSLLNNKDA 87 (397)
T ss_dssp TCBCSCSCCCCC-THHHHHHHHHTTCC--------T-----------TSGGG---BH-HHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCeEEEecCCCc-HHHHHHHHHHHhhc--------C-----------CCccc---Ch-hHHHHHHHHHHHHHHHhCCCCC
Confidence 368988866554 46778776644321 0 12211 11 1357788999999999999865
Q ss_pred CccEEEeCCHHHHHHHHHhhCCCC------------CCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccC
Q 006746 189 DYGMVFTANRTSAFKLLAESYPFM------------SVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRIN 255 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~~~------------~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~ 255 (632)
.|+||+|+|+|+.+++.++... +||+|++.. .|++ ....++..|++++.++.+ +++.+|
T Consensus 88 --~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~-----~~~~~~~~g~~~~~v~~~-~~~~~d 159 (397)
T 3f9t_A 88 --YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFS-----FEKGREMMDLEYIYAPIK-EDYTID 159 (397)
T ss_dssp --EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTH-----HHHHHHHHTCEEEEECBC-TTSSBC
T ss_pred --CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhH-----HHHHHHHcCceeEEEeeC-CCCcCC
Confidence 7999999999999999887322 488877654 5554 234456679999999998 567899
Q ss_pred HHHHHHHHHh-cCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC---C---------CCCCCC
Q 006746 256 SEKLRKMVVS-KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK---D---------MDSFGL 321 (632)
Q Consensus 256 ~~~l~~~i~~-~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~---~---------m~~ldl 321 (632)
+++|+++|++ ++ +++++.+.+|+||...|++ |.++|+++|+++++|.++..+. . ..++++
T Consensus 160 ~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
T 3f9t_A 160 EKFVKDAVEDYDV------DGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDF 233 (397)
T ss_dssp HHHHHHHHHHSCC------CEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSG
T ss_pred HHHHHHHHhhcCC------eEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccc
Confidence 9999999987 44 8999999999999999999 9999999999999999987431 0 015566
Q ss_pred CCCCCcEEEEccccccCCCCCceEEEEEeCCCc-cccC---CCCCCCceeecccccccccccccCCCCCCccccchhhhh
Q 006746 322 SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTV-PILV---DNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE 397 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~-~~L~---~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e 397 (632)
.. ++|++++|+||+++. |.++|+++++++.+ +.+. +.+.++.. . .
T Consensus 234 ~~-~~~~~~~s~~K~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~------------------~--- 282 (397)
T 3f9t_A 234 SL-GVDSITIDPHKMGHC-PIPSGGILFKDIGYKRYLDVDAPYLTETRQ--------A------------------T--- 282 (397)
T ss_dssp GG-TCSEEECCTTTTTCC-CSSCEEEEESSGGGGGGTCEECTTSSSSEE--------C------------------S---
T ss_pred cc-cCCeEEEccccccCC-CCCceEEEEeCHHHHHhhccCCccccCCCc--------c------------------c---
Confidence 66 899999999997754 77999999987653 2221 11111000 0 0
Q ss_pred hhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHH
Q 006746 398 KVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWL 477 (632)
Q Consensus 398 ~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L 477 (632)
..++. ....+.++. .+++.+...+++.+.++.+.+.+++
T Consensus 283 -~~~~~----------------~~~~~~~~~------------------------a~~~~~~~~~~~~~~~~~~~~~~~l 321 (397)
T 3f9t_A 283 -ILGTR----------------VGFGGACTY------------------------AVLRYLGREGQRKIVNECMENTLYL 321 (397)
T ss_dssp -SCSSC----------------CSHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccccc----------------ccchHHHHH------------------------HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 01111 111122222 5677676778899999999999999
Q ss_pred HHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhh
Q 006746 478 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 557 (632)
Q Consensus 478 ~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~ 557 (632)
.+.|.++ |.+ ++.+ ..++++.|.+.+ ...+.+.+.++||.++.|.
T Consensus 322 ~~~L~~~------g~~---~~~~----~~~~~~~~~~~~-------~~~~~~~l~~~gi~v~~~~--------------- 366 (397)
T 3f9t_A 322 YKKLKEN------NFK---PVIE----PILNIVAIEDED-------YKEVCKKLRDRGIYVSVCN--------------- 366 (397)
T ss_dssp HHHHHHT------TCC---BSSC----CSSSEEEEECTT-------HHHHHHHHHHTTCBCEECS---------------
T ss_pred HHHHHHC------CCE---EEcC----CCccEEEEEeCC-------HHHHHHHHHhCCeEEeccC---------------
Confidence 9999987 322 2333 357788776643 3455555556699887541
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|++.++|.|||+++++.|+++++
T Consensus 367 ------------------------~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 367 ------------------------CVKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp ------------------------SSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred ------------------------CCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 136999999999999999999999998864
No 40
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.94 E-value=1.8e-24 Score=237.37 Aligned_cols=324 Identities=11% Similarity=0.008 Sum_probs=228.7
Q ss_pred hhHHHHHHHHHHHHHcCCCCCC---ccEEEeCCHHHHHHHHHhhCCC-------CCC-----CeEEEeccccchhhHHHH
Q 006746 168 ESGLESAMKKRIMDFLNISEND---YGMVFTANRTSAFKLLAESYPF-------MSV-----KNLLTVYDYESEAVEAMI 232 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~e---y~vvft~naT~al~lv~~sl~~-------~~g-----d~ilt~~d~~s~~v~~~~ 232 (632)
..++.+++++.+++++|+++++ ..++||+|+|+|+.+++.++.. ++| ++|+++. .|. .+.
T Consensus 79 ~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~----~~~ 153 (452)
T 2dgk_A 79 SAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQI----CWH 153 (452)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCH----HHH
T ss_pred HHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcH----HHH
Confidence 3577889999999999998652 2489999999999998766521 134 4777655 443 224
Q ss_pred HHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC------CcEEE
Q 006746 233 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN------DWHIL 305 (632)
Q Consensus 233 ~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~------g~~vl 305 (632)
..++..|++++.++.++.++.+|+++|+++|+++ +++|++++.+|.||...|++ |.++|+++ |++++
T Consensus 154 ~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~ 227 (452)
T 2dgk_A 154 KFARYWDVELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMH 227 (452)
T ss_dssp HHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEE
T ss_pred HHHHHcCceEEEEecCCCCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEE
Confidence 4567789999999987437889999999999764 48999999999999999999 99999995 99999
Q ss_pred EeccccCCCC-----CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCC-c-ccc--CCCCCCCceeecccccccc
Q 006746 306 IDACALGPKD-----MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKST-V-PIL--VDNTSSGMVSLLPAKKQLW 376 (632)
Q Consensus 306 vDaaq~~g~~-----m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~-~-~~L--~~~~~gG~v~~~~~~~~~~ 376 (632)
||+|+..+.. -.++++...++|++++++||+++. |.|+|+++++++. + ..+ .+.+.+|... .|
T Consensus 228 vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 299 (452)
T 2dgk_A 228 IDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLA-PLGCGWVIWRDEEALPQELVFNVDYLGGQIG-------TF 299 (452)
T ss_dssp EECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCC-CSSCEEEEESSGGGSCGGGCEEECCTTCCEE-------EC
T ss_pred EEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCC-CCCeEEEEEcCHHHHHHHhccCccccCCCCC-------Cc
Confidence 9999876420 013555556899999999996644 8899999998753 2 222 1222221100 00
Q ss_pred cccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH
Q 006746 377 LTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD 456 (632)
Q Consensus 377 ~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd 456 (632)
. ..++.++ ..+.++. .+|.
T Consensus 300 --------~-------------~~~~r~~----------------~~~~~~~------------------------aal~ 318 (452)
T 2dgk_A 300 --------A-------------INFSRPA----------------GQVIAQY------------------------YEFL 318 (452)
T ss_dssp --------C-------------SCCSCBC----------------HHHHHHH------------------------HHHH
T ss_pred --------c-------------cCCCChh----------------HHHHHHH------------------------HHHH
Confidence 0 0111111 1112222 5566
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCc
Q 006746 457 QVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENI 536 (632)
Q Consensus 457 ~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI 536 (632)
.+...|+..+.++...++++|.+.|.++ +.++++.|..+..+.++|+|.+.+..+..++...+.+.+.+.||
T Consensus 319 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~--------~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi 390 (452)
T 2dgk_A 319 RLGREGYTKVQNASYQVAAYLADEIAKL--------GPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGW 390 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT--------SSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCC
Confidence 6656688999999999999999999987 56888866322246789999987532222454566666666799
Q ss_pred EEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 537 SLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 537 ~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.++.. +.+. ...+.+++|+|++.++|.|||++|++.|++.+..
T Consensus 391 ~v~~~--~~~~-------------------------------~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~ 433 (452)
T 2dgk_A 391 QVPAF--TLGG-------------------------------EATDIVVMRIMCRRGFEMDFAELLLEDYKASLKY 433 (452)
T ss_dssp BCCEE--ECST-------------------------------TCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eeeee--eCCc-------------------------------ccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 87641 1110 0012459999999999999999999999988754
No 41
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.94 E-value=1.6e-24 Score=240.90 Aligned_cols=385 Identities=12% Similarity=0.025 Sum_probs=243.6
Q ss_pred CCCCCc--hhHHHHHHhhccCcC-CCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccc
Q 006746 85 PQYFDT--YQIDQIRAKEYYQLS-LSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ 161 (632)
Q Consensus 85 p~y~~~--~~~d~iR~~ef~~L~-~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~ 161 (632)
|+-+.. .-++.+++.-.+..- .....||||.++++.+..+++++..+.. |.+ .
T Consensus 74 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~-----------------------n~~-~ 129 (497)
T 2qma_A 74 DNKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAAL-----------------------NQS-M 129 (497)
T ss_dssp SSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHH-----------------------CCC-T
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhh-----------------------ccc-c
Confidence 554432 345667664344331 1456899999999999999998654221 110 0
Q ss_pred ccccc--chhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC---------C---CC------CC-eEEEe
Q 006746 162 LLHGG--QESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP---------F---MS------VK-NLLTV 220 (632)
Q Consensus 162 ~~~g~--~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~---------~---~~------gd-~ilt~ 220 (632)
..|+. ....+++++++.+++++|+++. ..++||+|+|+|+.+++.+.. + .+ |+ +|+++
T Consensus 130 ~~~~~~~~~~~le~~~~~~la~~~g~~~~-~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s 208 (497)
T 2qma_A 130 DSWDQASSATYVEQKVVNWLCDKYDLSEK-ADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCS 208 (497)
T ss_dssp TCGGGCHHHHHHHHHHHHHHHHHTTCCTT-CEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEE
T ss_pred cchhhChHHHHHHHHHHHHHHHHhCCCCC-CCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEEC
Confidence 11111 2356777889999999999752 379999999999998777631 1 12 45 56655
Q ss_pred -ccccchhhHHHHHHHHhcCC---EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHH
Q 006746 221 -YDYESEAVEAMIRTSEKRGA---RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMR 295 (632)
Q Consensus 221 -~d~~s~~v~~~~~~a~~~G~---~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~ 295 (632)
..|++ + ...++..|. +++.+|.+ +++.+|+++|+++|+++......+.+|++++.+|.||...|++ |.+
T Consensus 209 ~~~h~s--~---~~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~ 282 (497)
T 2qma_A 209 KKSHFT--V---QKSASWMGLGEKAVMTVDAN-ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIAD 282 (497)
T ss_dssp TTSCTH--H---HHHHHHTTSCGGGEEEECBC-TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHH
T ss_pred CCchHH--H---HHHHHHcCCCcccEEEEecC-CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHH
Confidence 46664 2 223344444 79999987 6788999999999986421111234889999999999999999 999
Q ss_pred HHhhCCcEEEEeccccCCCCCCCCC----CCCC-CCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecc
Q 006746 296 IAQENDWHILIDACALGPKDMDSFG----LSLV-RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLP 370 (632)
Q Consensus 296 ~a~~~g~~vlvDaaq~~g~~m~~ld----ls~~-~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~ 370 (632)
+|+++|++++||+++.++. .+.+ +..+ ++|++++|+||+++. |.|+|+++++++.. +++....+
T Consensus 283 l~~~~~~~l~vD~a~~~~~--~~~~~~~~~~gi~~~D~i~~s~hK~l~~-p~~~G~l~~~~~~~--~~~~~~~~------ 351 (497)
T 2qma_A 283 MAVKHDMWMHVDGAYGGAL--ILSSHKSRLKGVERAHSISVDFHKLFYQ-TISCGALLVNDKSN--FKFLLHHA------ 351 (497)
T ss_dssp HHHHHTCEEEEEETTGGGG--GGSTTGGGGTTGGGCSEEEEETTTTTCC-CSSCEEEEESCGGG--GGGGCC--------
T ss_pred HHHHcCCEEEEehhhhHHH--HhCcchHhhcCcccCCEEEEcchhccCC-CcceEEEEEeCHHH--HHHhcCCc------
Confidence 9999999999999988765 2333 3334 789999999997776 88999999997652 22111110
Q ss_pred cccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchh
Q 006746 371 AKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEI 450 (632)
Q Consensus 371 ~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 450 (632)
.|..... ..++++.+ +++ .++..... .++-
T Consensus 352 ---~yl~~~~-------------------~~~~~~~~-~~~----~~~r~~~a-l~~~---------------------- 381 (497)
T 2qma_A 352 ---DYLNREH-------------------DELPNLVD-KSI----ATTKRFDA-LKVF---------------------- 381 (497)
T ss_dssp ---------------------------------------------CCSCCCTH-HHHH----------------------
T ss_pred ---hhcCCcc-------------------ccCCCccc-cCC----CCCCchhH-HHHH----------------------
Confidence 0000000 00000000 000 00000000 1111
Q ss_pred hhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccC--HHHHH
Q 006746 451 ECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIE--PVLVQ 528 (632)
Q Consensus 451 ~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~--~~~V~ 528 (632)
.+++.+...|+..+.+|...+++++.+.|.++ |.++++++. ++++|+|.+.+... ..+ ...+.
T Consensus 382 --~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~--------~~~~~~~~~----~~~~v~f~~~~~~~-~~~~l~~~l~ 446 (497)
T 2qma_A 382 --MTMQNVGPKALGDMYDHLLAQTLEVADMIRTN--------DQFELLAEP----SLSTVLFRATHETA-DLDELNKALR 446 (497)
T ss_dssp --HHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTC--------TTEEECSCC----SSSEEEEEECCSSS-CHHHHHHHHH
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhC--------CCeEEEcCC----CceEEEEEEcCCcc-CHHHHHHHHH
Confidence 35555544567888999999999999999987 668888753 57899999865311 000 11222
Q ss_pred HHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHH
Q 006746 529 KLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVA 607 (632)
Q Consensus 529 kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~ 607 (632)
+.+.+.|+.+..+. ...+.++||+|+ ++++|.+||+++++.|+
T Consensus 447 ~~l~~~G~~~~~~~------------------------------------~~~g~~~lRis~~~~~~t~edi~~~~~~l~ 490 (497)
T 2qma_A 447 LEALTRGIAVLGET------------------------------------IVDGKTALKFTILNPCLTTSDFESLLSKIN 490 (497)
T ss_dssp HHHHHHTSCBCEEE------------------------------------EETTEEEEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEee------------------------------------EECCEEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 22333344432110 001236899998 99999999999999999
Q ss_pred Hhhhh
Q 006746 608 QFLDA 612 (632)
Q Consensus 608 ~~l~~ 612 (632)
++++.
T Consensus 491 ~~~~~ 495 (497)
T 2qma_A 491 MLAVE 495 (497)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88653
No 42
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.93 E-value=1.5e-23 Score=233.73 Aligned_cols=352 Identities=15% Similarity=0.016 Sum_probs=246.2
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC--
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS-- 186 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~-- 186 (632)
..+|....++.++..+.+++...+.... .++. .+. ...++.+++++.+++++|++
T Consensus 57 ~~~l~s~~t~~~~~~v~~~l~~~~~~~~-------------------~~~~---~~p-~~~~le~~~~~~la~l~g~~~~ 113 (502)
T 3hbx_A 57 RLNLASFVTTWMEPECDKLIMSSINKNY-------------------VDMD---EYP-VTTELQNRCVNMIAHLFNAPLE 113 (502)
T ss_dssp GGBTTCCSCCCCCHHHHHHHHHTTTCBT-------------------TCTT---TCH-HHHHHHHHHHHHHHHHTTCCCC
T ss_pred CceeccccCCCCCHHHHHHHHHHhccCC-------------------CChh---cCh-hHHHHHHHHHHHHHHHhCCCcc
Confidence 3344444456778888888776543210 1111 011 13578889999999999998
Q ss_pred CCCc-cEEEeCCHHHHHHHHHhhCCCC-------CCC-----eEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCcc
Q 006746 187 ENDY-GMVFTANRTSAFKLLAESYPFM-------SVK-----NLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRL 252 (632)
Q Consensus 187 ~~ey-~vvft~naT~al~lv~~sl~~~-------~gd-----~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~ 252 (632)
+++. .-+||+|+|+|+.+++.++... +|+ +|+++. .|.+ +...++..|++++.+++++.++
T Consensus 114 ~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s-----~~~~~~~~G~~~~~v~~~~~~~ 188 (502)
T 3hbx_A 114 EAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVC-----WEKFARYFEVELKEVKLSEGYY 188 (502)
T ss_dssp SSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHH-----HHHHHHHTTCEEEEECCBTTBC
T ss_pred cccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHH-----HHHHHHHcCceeEEEecCCCcC
Confidence 4322 2347999999999887765221 255 776654 4443 2456677899999999985558
Q ss_pred ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC------CcEEEEeccccC-------CCCCCC
Q 006746 253 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN------DWHILIDACALG-------PKDMDS 318 (632)
Q Consensus 253 ~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~------g~~vlvDaaq~~-------g~~m~~ 318 (632)
.+|+++|+++|+++ +++|++++.+|.||...|++ |.++|+++ |++++||+|+.. +. .+
T Consensus 189 ~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~--~~ 260 (502)
T 3hbx_A 189 VMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPE--LE 260 (502)
T ss_dssp SCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTT--CC
T ss_pred cCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcc--cc
Confidence 89999999999764 48999999999999999999 99999998 999999999873 32 35
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCC-ccc-c--CCCCCCCceeecccccccccccccCCCCCCccccchh
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKST-VPI-L--VDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKS 394 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~-~~~-L--~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 394 (632)
.++...++|++++++||+++. |.|+|++++++.. +.. + .+.+.++...
T Consensus 261 ~~~~~~~~D~v~~s~hK~l~~-p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~--------------------------- 312 (502)
T 3hbx_A 261 WDFRLPLVKSINVSGHKYGLV-YAGIGWVIWRNKEDLPEELIFHINYLGADQP--------------------------- 312 (502)
T ss_dssp CSTTSTTEEEEEEETTTTTCC-CSSCEEEEESSGGGSCGGGCEEECSSSSCEE---------------------------
T ss_pred cccCCCCceEEEECcccccCC-CCCeEEEEEeCHHHhhHHhccCcccccCCCC---------------------------
Confidence 666667899999999997754 8899999998653 211 1 1122221100
Q ss_pred hhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHH
Q 006746 395 KQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLI 474 (632)
Q Consensus 395 ~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~ 474 (632)
.-+.. ++.....+.++. .+|..+...|+..+.+|...++
T Consensus 313 -----~~~~~------------~sr~~~~~~a~~------------------------~al~~lg~~g~~~~~~~~~~~a 351 (502)
T 3hbx_A 313 -----TFTLN------------FSKGSSQVIAQY------------------------YQLIRLGHEGYRNVMENCRENM 351 (502)
T ss_dssp -----ECCSC------------CSCBSHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----Ccccc------------CCchHHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 111111223332 5677666678899999999999
Q ss_pred HHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 475 NWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 475 ~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
++|.+.|.++ +.++++.+. ...++|+|.+.+.. .++...+.+.+.++||.++... .+.
T Consensus 352 ~~l~~~L~~~--------~~~~~~~~~---~~~~~v~f~~~~~~--~~~~~~l~~~L~~~Gi~v~~~~--~p~------- 409 (502)
T 3hbx_A 352 IVLREGLEKT--------ERFNIVSKD---EGVPLVAFSLKDSS--CHTEFEISDMLRRYGWIVPAYT--MPP------- 409 (502)
T ss_dssp HHHHHHHHTT--------TCEEECSCS---SSSSEEEEEESSCS--SCCHHHHHHHHHTTTCBCCEEE--CCT-------
T ss_pred HHHHHHHHhC--------CCEEEEeCC---CCceEEEEEecCCC--cCCHHHHHHHHHhCCcEEeecc--CCc-------
Confidence 9999999987 568888762 36789999997632 2566667777777899875321 000
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+...+|++++..+|.|||++|++.|++.++
T Consensus 410 ------------------------~~~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 410 ------------------------NAQHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp ------------------------TCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------ccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 012346899999999999999999999998775
No 43
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.93 E-value=7.2e-24 Score=229.95 Aligned_cols=327 Identities=10% Similarity=0.033 Sum_probs=214.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 168 ESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
....++++|+++++++|++ .++||+|+|+|+++++.++ +++||+|++ ...|++ ....+...++..|++++.++
T Consensus 54 ~~~~~~~l~~~la~~~g~~----~~~~~~~gt~a~~~al~~l-~~~gd~vi~~~~~~~~-~~~~~~~~~~~~g~~~~~~~ 127 (412)
T 2cb1_A 54 KDPTAKALEERLKALEGAL----EAVVLASGQAATFAALLAL-LRPGDEVVAAKGLFGQ-TIGLFGQVLSLMGVTVRYVD 127 (412)
T ss_dssp CCHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEETTCCHH-HHHHHHHTTTTTTCEEEEEC
T ss_pred CChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEeCCCchh-HHHHHHHHHHHcCCEEEEEC
Confidence 3466789999999999985 5999999999999999998 789999765 457765 33333334567899999887
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCC-CCCCCCCCCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGP-KDMDSFGLSLV 324 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g-~~m~~ldls~~ 324 (632)
.+ +++|+++|+++ +++|++.+.+|+||...|++ |.++|+++|+++++|+++..+ ....++ .+
T Consensus 128 ~~-------~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~---~~ 191 (412)
T 2cb1_A 128 PE-------PEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPL---AW 191 (412)
T ss_dssp SS-------HHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGG---GG
T ss_pred CC-------HHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCcc---cc
Confidence 53 78888888653 58999999999999999999 999999999999999999887 321233 35
Q ss_pred CCcEEEEccccccCCCCCc-eEEEEEeCCCcc-----ccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhh
Q 006746 325 RPDFLICSFYQIFGENPSG-FGCLFVKKSTVP-----ILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 398 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G-~G~L~Vr~~~~~-----~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~ 398 (632)
++|++++|+||++|. |.+ +|++++.++... .+.++...|.... .. +... ......
T Consensus 192 ~~di~~~S~~K~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~----~~~~-------------~~~~~~ 252 (412)
T 2cb1_A 192 GAHVVVESLTKWASG-HGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW-EA----LRAR-------------CFPERV 252 (412)
T ss_dssp TCSEEEEETTTTTTC-SSCCCCEEEEECCCSGGGGSGGGGCC-------H-HH----HGGG-------------HHHHHH
T ss_pred CCeEEEECCcccccC-CCCcEEEEEEeccccccccccccccccccccchh-hc----cchH-------------HHHHHH
Confidence 799999999998875 666 899998874321 1222211111100 00 0000 000001
Q ss_pred hccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHH
Q 006746 399 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLV 478 (632)
Q Consensus 399 e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~ 478 (632)
+.++.+..+ . ...... .++....--.+....++...+..++.
T Consensus 253 r~~~~~~~g----------~-~~~~~~---------------------------a~~~~~~l~~l~~~~~~~~~~~~~l~ 294 (412)
T 2cb1_A 253 RTLGLSLCG----------M-ALSPFN---------------------------AYLLFQGLETVALRVARMSETARFLA 294 (412)
T ss_dssp HHHHTTTTC----------C-CCCHHH---------------------------HHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC----------C-CCChHH---------------------------hHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 111111111 0 000000 11111111123444555668889999
Q ss_pred HHHHccCCCCCCCCCcEE-EECCCCC------------CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccC----
Q 006746 479 NALMKLQHPNTEGNALVK-IYGPKIR------------FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYG---- 541 (632)
Q Consensus 479 ~~L~~l~h~~~~G~p~v~-Iygp~~~------------~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G---- 541 (632)
+.|.++ |.|. +++|... ..++++++|++ + +.+.+.+++++.||.+ +|
T Consensus 295 ~~L~~~--------~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~------~~~~~~~~l~~~~i~~-~~s~g~ 358 (412)
T 2cb1_A 295 ERLQGH--------PKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G------DLERASRFLGAIRLLK-AANLGD 358 (412)
T ss_dssp HHHHTC--------TTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S------SHHHHHHHHHHCSSEE-CSCCSC
T ss_pred HHHHcC--------CCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C------CHHHHHHHHHhCCeee-ecccCC
Confidence 999876 4455 6666432 14689999998 5 5678888999999999 88
Q ss_pred -----ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHH
Q 006746 542 -----SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQ 608 (632)
Q Consensus 542 -----~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~ 608 (632)
++|......... ...+++. +...+.||+|+|.+++.+||++|.++|++
T Consensus 359 ~~sl~~~~~~~~~~~~~---~~~~~~~----------------g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 359 ARTLLVHPWTTTHSRLK---EEARLQA----------------GVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp SSCEEECTTTTTTTTSC---HHHHHHT----------------TCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CcceeecCcccccccCC---HHHHHhc----------------CCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 467654322110 0111111 12357999999999999999999999864
No 44
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.93 E-value=1.1e-23 Score=234.54 Aligned_cols=365 Identities=12% Similarity=0.052 Sum_probs=234.1
Q ss_pred CceEeecCCCCCCCHHHHHHH-hcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQ-ESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~-~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
...||+|..+++.|..++..+ ..+.+. |..+ +..+.....+.+++++.+++++|++
T Consensus 92 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~----------------------~~~~-~~~~~~~~~le~~~~~~la~~~g~~ 148 (504)
T 2okj_A 92 HPRFFNQLSTGLDIIGLAGEWLTSTANT----------------------NMFT-YEIAPVFVLMEQITLKKMREIVGWS 148 (504)
T ss_dssp CTTEESSSSCCCCHHHHHHHHHHHHHCC----------------------BSSC-TTTCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEccCCCCHHHHHHHHHHHhhcc----------------------CCCc-hhhChHHHHHHHHHHHHHHHHhCCC
Confidence 456999999998888776543 222211 1100 0011113466778889999999998
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCC-------CCC-----C-eEEEe-ccccchhhHHHHHHHHhcCC---EEEEEeccC
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPF-------MSV-----K-NLLTV-YDYESEAVEAMIRTSEKRGA---RVMSAEFSW 249 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~-------~~g-----d-~ilt~-~d~~s~~v~~~~~~a~~~G~---~v~~v~~~~ 249 (632)
.+...++||+|+|+|+.+++.++.. ++| + +|+++ ..|++ + ...++..|. +++.+|.+
T Consensus 149 ~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s--~---~~~~~~~g~g~~~v~~v~~~- 222 (504)
T 2okj_A 149 SKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS--I---KKAGAALGFGTDNVILIKCN- 222 (504)
T ss_dssp SSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH--H---HHHHHHTTSCGGGEEEECBC-
T ss_pred CCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH--H---HHHHHHcCCCcccEEEEecC-
Confidence 4234799999999999988877631 245 5 56655 46664 2 223344455 89999987
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCC---CCCCCCC-C
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDM---DSFGLSL-V 324 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m---~~ldls~-~ 324 (632)
+++.+++++|+++|++......++++|++++.+|.||...|++ |+++|+++|++++||+++.++.-. ....+.. .
T Consensus 223 ~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~ 302 (504)
T 2okj_A 223 ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE 302 (504)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc
Confidence 6788999999999976321122478999999999999999999 999999999999999998776410 0123332 3
Q ss_pred CCcEEEEccccccCCCCCceEEEEEeCC-Cccc---cCCCCC-CCcee--ecccccccccccccCCCCCCccccchhhhh
Q 006746 325 RPDFLICSFYQIFGENPSGFGCLFVKKS-TVPI---LVDNTS-SGMVS--LLPAKKQLWLTDEFSSCETEPEQTSKSKQE 397 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G~G~L~Vr~~-~~~~---L~~~~~-gG~v~--~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e 397 (632)
++|++++++||++|. |.|+|++++|++ .+.. ..+.+. ++... ...... .| .++
T Consensus 303 ~~D~i~~~~hK~~~~-p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~--------~~~---------- 362 (504)
T 2okj_A 303 RANSVTWNPHKMMGV-LLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTG-DK--------AIQ---------- 362 (504)
T ss_dssp GCSEEEECTTSTTCC-CSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCG-GG--------SSC----------
T ss_pred cCCEEEECchhhcCC-CcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcc-cC--------CCC----------
Confidence 789999999999887 889999999985 4332 122222 21110 000000 00 000
Q ss_pred hhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHH
Q 006746 398 KVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWL 477 (632)
Q Consensus 398 ~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L 477 (632)
.+..+ + ..++. .++..+...|+..+.+|...++++|
T Consensus 363 ---~~rr~-----------~------~l~~~------------------------a~l~~lg~~g~~~~~~~~~~~a~~l 398 (504)
T 2okj_A 363 ---CGRHV-----------D------IFKFW------------------------LMWKAKGTVGFENQINKCLELAEYL 398 (504)
T ss_dssp ---SSCBC-----------C------HHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCc-----------c------HHHHH------------------------HHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 00000 0 01111 3344444567889999999999999
Q ss_pred HHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC--C----C-------ccCHHHHHHHHHhCCc-EEccCcc
Q 006746 478 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK--R----E-------KIEPVLVQKLADRENI-SLSYGSL 543 (632)
Q Consensus 478 ~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~--G----~-------~i~~~~V~kla~~~gI-~lr~G~~ 543 (632)
.+.|.++ |.++++++. ....++|+|.+.+.. + . .....+.++|.+ .|+ .++.+.
T Consensus 399 ~~~L~~~--------~~~~~~~~~--~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~G~~~~~~~~- 466 (504)
T 2okj_A 399 YAKIKNR--------EEFEMVFNG--EPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMME-SGTTMVGYQP- 466 (504)
T ss_dssp HHHHTTC--------TTEEESSSS--CCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHH-HTSCEEEEEE-
T ss_pred HHHHhcC--------CCEEEEecC--CCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHh-CCcEEEEeeE-
Confidence 9999886 678998752 146788999875421 0 0 001122333333 343 332110
Q ss_pred CChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccC-CCCCHHHHHHHHHHHHHhhhh
Q 006746 544 HHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLG-YLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 544 c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg-~~~t~eDV~rlv~~l~~~l~~ 612 (632)
. .+ ..++||+|++ +++|.+||+++++.|+++++.
T Consensus 467 ----------------------------~------~~-~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 467 ----------------------------Q------GD-KANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp ----------------------------E------TT-EEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred ----------------------------E------CC-ceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 00 1258999996 999999999999999988653
No 45
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.93 E-value=1.8e-25 Score=248.18 Aligned_cols=362 Identities=15% Similarity=0.107 Sum_probs=243.5
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccc--hhHHHHHHHHHHHHHcCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ--ESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~--~~~~~~~~R~~ia~~l~a~ 186 (632)
.+.| .++.++.|+.+++++.+.+... |..++|.+.+ |++. ..++++.+|+++++++|++
T Consensus 46 ~i~L-~a~e~~~~~~V~eA~~~~l~~~-----------------~~~g~p~~~~-y~~~~~~~~le~~~~~~~a~~~g~~ 106 (483)
T 1rv3_A 46 GLEL-IASENFASRAVLEALGSCLNNK-----------------YSLGYPGQRY-YGGTEHIDELETLCQKRALQAYGLD 106 (483)
T ss_dssp SEEC-CTTCCCCCHHHHHHHTSGGGTC-----------------CCCEETTEES-SSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CeEE-EcCCCCCCHHHHHHHHHHHhcc-----------------CcccCCCccc-cCcchhHHHHHHHHHHHHHHHhCCC
Confidence 4555 4667789999999987655321 1114554443 3322 2567789999999999998
Q ss_pred CCC--ccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHH---HHHhcC--CEEEEEeccCCccccCHHH
Q 006746 187 END--YGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIR---TSEKRG--ARVMSAEFSWPRLRINSEK 258 (632)
Q Consensus 187 ~~e--y~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~---~a~~~G--~~v~~v~~~~~~~~i~~~~ 258 (632)
+++ ..|++|+|+ +++..+..++ +++||+|++ ..+|.+....+... .++..| ++++.++++..++.+|.++
T Consensus 107 ~~~~~~~V~~~sGs-~an~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~ 184 (483)
T 1rv3_A 107 PQCWGVNVQPYSGS-PANFAVYTAL-VEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDR 184 (483)
T ss_dssp TTTEEEECCCSSHH-HHHHHHHHHH-TCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHH
T ss_pred cccCceEEEECCcH-HHHHHHHHHh-cCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHH
Confidence 654 247777766 7777778888 799999765 45666532222100 001123 4444444464567899999
Q ss_pred HHHHHH-hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCC---CCcEEEEcc
Q 006746 259 LRKMVV-SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLV---RPDFLICSF 333 (632)
Q Consensus 259 l~~~i~-~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~---~~Df~~~S~ 333 (632)
|+++++ .+ ++++++ +.+|.+ ...|++ |.++|+++|+++++|++|+.|. ...++..+ ++|++++|+
T Consensus 185 le~~i~~~~------tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~--~~~~~~~~p~~~~div~~s~ 254 (483)
T 1rv3_A 185 LEENARLFH------PKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGL--VVAGVVPSPFEHCHVVTTTT 254 (483)
T ss_dssp HHHHHHHHC------CSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHH--HHHTSSCCGGGTCSEEEEES
T ss_pred HHHHHhhcC------CcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcc--cccCCCCCCCCCCcEEEecC
Confidence 999998 43 488988 889988 899999 9999999999999999988654 23333333 689999999
Q ss_pred ccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhh
Q 006746 334 YQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEM 413 (632)
Q Consensus 334 hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~ 413 (632)
||+++. |.| |+++++++... ++ ..+|.... |. +. ..+. .. .+.+
T Consensus 255 ~K~l~G-prg-G~i~~~~~~~~-~~--~~~g~~~~-------y~--------~~-----~~~~---~~--~~~~------ 298 (483)
T 1rv3_A 255 HKTLRG-CRA-GMIFYRRGVRS-VD--PKTGKEIL-------YN--------LE-----SLIN---SA--VFPG------ 298 (483)
T ss_dssp SGGGCC-CSC-EEEEEECSBCC----------CCB-------CC--------HH-----HHHH---HH--HTTT------
T ss_pred cccCCC-CCc-eEEEEcchhhh-hc--cccCcchh-------hH--------HH-----HHhh---hh--cCCc------
Confidence 996643 989 99999988653 33 12222100 00 00 0000 00 0000
Q ss_pred hhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCC
Q 006746 414 RQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNA 493 (632)
Q Consensus 414 ~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p 493 (632)
..|+++.+.+.++. .|++.+...+++.+.++.+.++++|.+.|.++ |
T Consensus 299 -~~g~~~~~~iaal~------------------------~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g-- 345 (483)
T 1rv3_A 299 -LQGGPHNHAIAGVA------------------------VALKQAMTPEFKEYQRQVVANCRALSAALVEL------G-- 345 (483)
T ss_dssp -TCCSCCHHHHHHHH------------------------HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT------T--
T ss_pred -ccCCccHHHHHHHH------------------------HHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc------C--
Confidence 14677777788876 78888766678999999999999999999987 4
Q ss_pred cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEc----cCccCChHHHhHHHHhhhhhhhhhhccccc
Q 006746 494 LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLS----YGSLHHIWFSDKYQKEKDNVLEKTDREAKS 569 (632)
Q Consensus 494 ~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr----~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 569 (632)
++++++.. ....+.+.+.. .| ++...+.+++++.||.++ .|..|.
T Consensus 346 -~~~~~~~~---~~~~~~v~~~~-~g--~~~~~~~~~L~~~gI~v~~~~~pg~~~~------------------------ 394 (483)
T 1rv3_A 346 -YKIVTGGS---DNHLILVDLRS-KG--TDGGRAEKVLEACSIACNKNTCPGDKSA------------------------ 394 (483)
T ss_dssp -CEEGGGSC---SSSEEEEEGGG-GT--CCHHHHHHHHHHTTEECEEECCSSCSCT------------------------
T ss_pred -CEeccCCC---CCceEEEeccC-CC--CCHHHHHHHHHhCCcEEecCCCCCCCcC------------------------
Confidence 45665531 11233333332 12 577788888888999987 443221
Q ss_pred cccccccccCCCCCcEEEEccCCCCC----HHHHHHHHHHHHHhhhh
Q 006746 570 KSDNNRKDKANLGITVVTASLGYLAN----FEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 570 ~~~~~~~~~~~~~~~~VRvSlg~~~t----~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||+|++.+|| .+|+++++++|+++++.
T Consensus 395 -----------~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 395 -----------LRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp -----------TSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------CCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 134689999999999 99999999999998875
No 46
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.92 E-value=7.6e-23 Score=216.58 Aligned_cols=340 Identities=15% Similarity=0.116 Sum_probs=234.4
Q ss_pred CCCCCCchhHHHHHHhhccCcCCCCceEeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccccc
Q 006746 84 YPQYFDTYQIDQIRAKEYYQLSLSNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL 162 (632)
Q Consensus 84 ~p~y~~~~~~d~iR~~ef~~L~~~~~vyLD~ag~gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~ 162 (632)
.+.|.......++++ +|.. ++.+.|+.+-..+ .|+.+++++.+.+.... .++.
T Consensus 13 ~~~~~~~~~~~~~~~-~~~~---~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-------------------~y~~--- 66 (363)
T 3ffh_A 13 LSSYKPGKREEEVMA-ELGL---TKITKLSSNENPLGTSKKVAAIQANSSVETE-------------------IYPD--- 66 (363)
T ss_dssp CCC----CHHHHHHH-TTTC---SCCEECSSCSCTTCCCHHHHHHHHTCBSCCC-------------------BC-----
T ss_pred CCCCCCCCCHHHHHH-hcCC---CceEEccCCCCCCCCCHHHHHHHHHHHHHhh-------------------cCCC---
Confidence 455654456666665 4652 5678888775553 57888888776442110 1111
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCE
Q 006746 163 LHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 163 ~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~ 241 (632)
....+.|+++++++|++++ .|+||+|+|+|+++++.++ +++||+|++. ..|++ ....++..|++
T Consensus 67 -------~~~~~lr~~la~~~~~~~~--~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~-----~~~~~~~~g~~ 131 (363)
T 3ffh_A 67 -------GWASSLRKEVADFYQLEEE--ELIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQ-----YRQNALIEGAE 131 (363)
T ss_dssp ---------CHHHHHHHHHHHTCCGG--GEEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHH-----HHHHHHHHTCE
T ss_pred -------cchHHHHHHHHHHhCCChh--hEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHH-----HHHHHHHcCCE
Confidence 1235899999999999865 7999999999999999998 7899997654 45543 24456778999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC--CcEEEEeccccC---CCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWHILIDACALG---PKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~--g~~vlvDaaq~~---g~~ 315 (632)
++.++.+ +++.+|+++|+++++++ ++++++++.+|+||..+|++ |.++++.. |+++++|.++.. +..
T Consensus 132 ~~~v~~~-~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~ 204 (363)
T 3ffh_A 132 VREIPLL-QDGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQP 204 (363)
T ss_dssp EEEEECC-TTSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCC
T ss_pred EEEecCC-CCCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccc
Confidence 9999998 46789999999988653 58999999999999999999 99988877 999999999872 110
Q ss_pred CCCCCC-CCCCCcEEEEccccccCCCCCce--EEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 316 MDSFGL-SLVRPDFLICSFYQIFGENPSGF--GCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 316 m~~ldl-s~~~~Df~~~S~hK~~G~~P~G~--G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
...+.. ...+-++++.|+.|.+| +.|+ |+++++++.++.+.+... .|
T Consensus 205 ~~~~~~~~~~~~~i~~~s~sK~~g--~~G~r~G~~~~~~~~~~~l~~~~~------------~~---------------- 254 (363)
T 3ffh_A 205 EKHEKLVRTYKNLIITRTFSKIYG--LASARVGYGIADKEIIRQLNIVRP------------PF---------------- 254 (363)
T ss_dssp CCCGGGGGTCTTEEEEEESSSTTC--CSSCCCEEEEECHHHHHHHHHTCC------------SC----------------
T ss_pred cCHHHHhhcCCCEEEEeechhhhc--CchhceeeeecCHHHHHHHHHhCC------------CC----------------
Confidence 011111 12344688999999999 5576 999998776654433110 00
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRC 472 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~ 472 (632)
+.+.+...++. ++|+.. ..++.+.++.+.
T Consensus 255 -------------------------~~~~~~~~~~~------------------------~~l~~~--~~~~~~~~~~~~ 283 (363)
T 3ffh_A 255 -------------------------NTTSIGQKLAI------------------------EAIKDQ--AFIGECRTSNAN 283 (363)
T ss_dssp -------------------------CCBHHHHHHHH------------------------HHHHCH--HHHHHHHHHHHH
T ss_pred -------------------------CCCHHHHHHHH------------------------HHhcCH--HHHHHHHHHHHH
Confidence 00111112221 444422 246788899999
Q ss_pred HHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHH
Q 006746 473 LINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 473 L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
+.+++.+.|.++ +.++++.+ .+..+.+.+.. +...+.+.+.++||.++.|..+.
T Consensus 284 ~~~~l~~~l~~~--------~g~~~~~~-----~~~~~~~~~~~------~~~~~~~~l~~~gi~v~~g~~~~------- 337 (363)
T 3ffh_A 284 GIKQYEAFAKRF--------EKVKLYPA-----NGNFVLIDLGI------EAGTIFSYLEKNGYITRSGAALG------- 337 (363)
T ss_dssp HHHHHHHHHHHC--------TTCEECCC-----CSSEEEEECSS------CHHHHHHHHHHTTEECEETTTTT-------
T ss_pred HHHHHHHHHhhC--------CCceECCC-----CCeEEEEECCC------CHHHHHHHHHHCCeEEEeCccCC-------
Confidence 999999999984 33566533 46677777653 45666666667899998764211
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
..+.||+|++ |.+|++++++.|+++|
T Consensus 338 -----------------------------~~~~iRis~~---~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 338 -----------------------------FPTAVRITIG---KEEDNSAVIALLEKLL 363 (363)
T ss_dssp -----------------------------CTTEEEEECC---CHHHHHHHHHHHHHHC
T ss_pred -----------------------------CCCeEEEECC---CHHHHHHHHHHHHHhC
Confidence 1369999988 9999999999998764
No 47
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.92 E-value=8.5e-24 Score=222.24 Aligned_cols=331 Identities=10% Similarity=0.045 Sum_probs=227.2
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
+..+|||+++.+..++.+++++.+.+... ... +| ..+..+++++.+++++|++
T Consensus 13 p~~i~l~~~~~~~~~~~v~~a~~~~~~~~--------~~~-----------------~g--~~~~~~~~~~~l~~~~g~~ 65 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARDNMTQ--------HAG-----------------YG--QDSHCAKAARLIGELLERP 65 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHHTTCC--------CCS-----------------TT--CSHHHHHHHHHHHHHHTCT
T ss_pred CeeEEecCCCcCCCCHHHHHHHHHHHhhc--------ccc-----------------cc--ccHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999987654311 000 01 2367789999999999987
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHh
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 265 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~ 265 (632)
++ .|+||+|+|+|+.+++.++ .++||+|++. ..|++ .... ..++..|++++.++.+ ++.+|+++|++.+++
T Consensus 66 ~~--~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~-~~~~--~~~~~~g~~~~~v~~~--~~~~d~~~l~~~l~~ 137 (359)
T 1svv_A 66 DA--DVHFISGGTQTNLIACSLA-LRPWEAVIATQLGHIS-THET--GAIEATGHKVVTAPCP--DGKLRVADIESALHE 137 (359)
T ss_dssp TS--EEEEESCHHHHHHHHHHHH-CCTTEEEEEETTSHHH-HSST--THHHHTTCCEEEECCT--TSCCCHHHHHHHHHH
T ss_pred Cc--cEEEeCCchHHHHHHHHHH-hCCCCEEEEcccchHH-HHHH--HHHhcCCCeeEEEeCC--CCeecHHHHHHHHHH
Confidence 65 7999999999999999998 6789997754 46654 2221 1246689999999875 567999999999986
Q ss_pred cC-cCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccc---cCCCCCCCCCCCC----CCCcEEEEcc
Q 006746 266 KG-KKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACA---LGPKDMDSFGLSL----VRPDFLICSF 333 (632)
Q Consensus 266 ~~-~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq---~~g~~m~~ldls~----~~~Df~~~S~ 333 (632)
+. ....+++++++++. |.||..+| ++ |.++|+++|+++++|.++ ..+. .+++... ..+|++++++
T Consensus 138 ~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~d~~~~s~ 214 (359)
T 1svv_A 138 NRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSS--PVNDLTLADIARLTDMFYIGA 214 (359)
T ss_dssp SCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTS--TTCCCCHHHHHHHCSEEEEEC
T ss_pred HHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcC--CCcchhhhhhhhcCCEEEEec
Confidence 41 11124689999998 68999999 88 899999999999999998 4443 2344332 4689999999
Q ss_pred ccccCCCCCceEEEEEeCCCccccCCCCC-CCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhh
Q 006746 334 YQIFGENPSGFGCLFVKKSTVPILVDNTS-SGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIE 412 (632)
Q Consensus 334 hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~-gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~ 412 (632)
||++| |.|.|+++++++.++.+.+... +|.. +..
T Consensus 215 ~K~g~--~~~~g~l~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~----- 249 (359)
T 1svv_A 215 TKAGG--MFGEALIILNDALKPNARHLIKQRGAL--------------------------------------MAK----- 249 (359)
T ss_dssp TTTTC--SSCEEEEECSGGGCTTHHHHHHHTTCC--------------------------------------CTT-----
T ss_pred ccCCC--CCceEEEEEcccHHHHHHHHHhcCCcc--------------------------------------ccc-----
Confidence 99866 8899999998887665543210 0000 000
Q ss_pred hhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCC
Q 006746 413 MRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGN 492 (632)
Q Consensus 413 ~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~ 492 (632)
..+...++ ...+...+++.+.++.+.+.++|.+.| ++
T Consensus 250 -------~~~~~~~~---------------------------~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~-------- 286 (359)
T 1svv_A 250 -------GWLLGIQF---------------------------EVLMKDNLFFELGAHSNKMAAILKAGL-EA-------- 286 (359)
T ss_dssp -------THHHHHHH---------------------------HHHTSTTHHHHHHHHHHHHHHHHHHHH-HH--------
T ss_pred -------chhhHHHH---------------------------HHHHhhhhHHHHHHHHHHHHHHHHHHh-cc--------
Confidence 00000111 112223346778899999999999999 55
Q ss_pred CcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccc
Q 006746 493 ALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSD 572 (632)
Q Consensus 493 p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 572 (632)
+.+++++|. .+.++.+.+ +.+.++++++++||.+- |.
T Consensus 287 ~~~~~~~~~----~~~~~~~~~--------~~~~~~~l~~~~gi~v~-~~------------------------------ 323 (359)
T 1svv_A 287 CGIRLAWPS----ASNQLFPIL--------ENTMIAELNNDFDMYTV-EP------------------------------ 323 (359)
T ss_dssp TTCCBSSCC----SSSEECBEE--------EHHHHHHHTTTEECEEE-EE------------------------------
T ss_pred CCeEEccCC----ccceEEEEc--------CHHHHHHHHHhcCEEEE-ec------------------------------
Confidence 335565553 344444433 23455555554599881 10
Q ss_pred ccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 573 NNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 573 ~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.+.||+|+++.++.+||+++++.|+++++.
T Consensus 324 ------~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 324 ------LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp ------ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred ------ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 0012468999999999999999999999988653
No 48
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.91 E-value=5.2e-23 Score=226.10 Aligned_cols=173 Identities=12% Similarity=0.098 Sum_probs=137.6
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVM 243 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~ 243 (632)
|+......+++.|++|++++|++ ..|+|+ ++++|+++++.++ +++||+|++....+.....++...+++.|++++
T Consensus 108 y~r~~~~~~~~l~~~lA~l~g~~---~~v~~~-sG~~Ai~~al~~l-~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~ 182 (445)
T 1qgn_A 108 YGRYGNPTTVVLEEKISALEGAE---STLLMA-SGMCASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETILPKMGITAT 182 (445)
T ss_dssp BGGGCCHHHHHHHHHHHHHHTCS---EEEEES-CHHHHHHHHHHHH-SCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEE
T ss_pred ccCCCChHHHHHHHHHHHHhCCC---cEEEeC-CHHHHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEE
Confidence 44444577889999999999985 255555 5559999999987 688999876554443355555555678899999
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCC
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLS 322 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls 322 (632)
.++.+ |+++|+++|++++ +++|.+.+.+|+||...|++ |.++|+++|+++++|.++..|....++
T Consensus 183 ~v~~~------d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~--- 248 (445)
T 1qgn_A 183 VIDPA------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKAL--- 248 (445)
T ss_dssp EECSS------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTT---
T ss_pred EeCCC------CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc---
Confidence 98763 7899999998642 38999999999999999999 999999999999999999877521232
Q ss_pred CCCCcEEEEccccccCCCCCc---eEEEEEeCCCcccc
Q 006746 323 LVRPDFLICSFYQIFGENPSG---FGCLFVKKSTVPIL 357 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G---~G~L~Vr~~~~~~L 357 (632)
.+++|+++.|+||++| |.| .|+++.+++.++.+
T Consensus 249 ~~g~Div~~S~sK~~g--g~gd~~~G~l~~~~~l~~~l 284 (445)
T 1qgn_A 249 ALGADLVLHSATKFLG--GHNDVLAGCISGPLKLVSEI 284 (445)
T ss_dssp TTTCSEEEECTTTTTT--CSSSCCCEEEEECHHHHHHH
T ss_pred ccCCEEEEECCccccc--ccccceEEEEEECHHHHHHH
Confidence 4689999999999999 667 89999987665443
No 49
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.91 E-value=2.1e-24 Score=225.95 Aligned_cols=311 Identities=12% Similarity=0.067 Sum_probs=200.7
Q ss_pred HHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCcc
Q 006746 174 AMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRL 252 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~ 252 (632)
+.|+++++++|++ + .|+++ |+|+|+.+++.++ +++||+|++ ...|++ ....+...++..|++++.++.
T Consensus 2 ~l~~~la~~~g~~-~--~i~~~-sG~~a~~~~~~~~-~~~g~~v~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~----- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE-A--CAATA-SGMGAIAASVWTF-LKAGDHLISDDCLYGC-THALFEHQLRKFGVEVDFIDM----- 70 (331)
T ss_dssp HHHHHHHHHHTCS-E--EEEES-SHHHHHHHHHHHH-CCTTCEEEEESCCCHH-HHHHHHTHHHHTTCEEEEECT-----
T ss_pred hHHHHHHHHhCCC-e--EEEeC-ChHHHHHHHHHHh-cCCCCEEEEcCCCcch-HHHHHHHHHHhcCCEEEEeCC-----
Confidence 5789999999986 2 45555 5599999999988 688999765 456665 333334445678999998875
Q ss_pred ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh-CCcEEEEeccccCCCCCCCCCCCCCCCcEEE
Q 006746 253 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE-NDWHILIDACALGPKDMDSFGLSLVRPDFLI 330 (632)
Q Consensus 253 ~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~-~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~ 330 (632)
.|.++++++++++ ++++++++.+|+||..+|++ |.++|++ +|+++++|+++..|.. ..++ .+++|+++
T Consensus 71 -~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~--~~~~-~~~~d~~~ 140 (331)
T 1pff_A 71 -AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPIL--TNPL-DLGVDIVV 140 (331)
T ss_dssp -TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHH--CCGG-GGTCSEEE
T ss_pred -CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCccccc--CChh-hcCCcEEE
Confidence 3567888877643 58999999999999999999 9999999 9999999999987641 2233 46899999
Q ss_pred EccccccCCCCCc--eEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCc
Q 006746 331 CSFYQIFGENPSG--FGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 407 (632)
Q Consensus 331 ~S~hK~~G~~P~G--~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~ 407 (632)
+|+||+||. |.+ .|++++++ +.++.+.+...++ | .++
T Consensus 141 ~s~~K~~~~-~~~r~~G~~~~~~~~~~~~l~~~~~~~-----------~-----------------------~~~----- 180 (331)
T 1pff_A 141 HSATKYING-HTDVVAGLVCSRADIIAKVKSQGIKDI-----------T-----------------------GAI----- 180 (331)
T ss_dssp EETTTTTSS-SSSCCCEEEEECHHHHHHHHHTCCCCC-----------C-----------------------CCC-----
T ss_pred EECccccCC-CCCceEEEEEeCcHHHHHHHHHHHHhh-----------c-----------------------CCC-----
Confidence 999998875 766 79999988 7665554422110 0 000
Q ss_pred cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccC--
Q 006746 408 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ-- 485 (632)
Q Consensus 408 ~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~-- 485 (632)
.+......+. ++++.... -++...+....+.+++.+. ..++
T Consensus 181 -----------~~~~~~~~~~------------------------~~l~~~~~-~~~~~~~~~~~~~~~l~~~-~~l~~~ 223 (331)
T 1pff_A 181 -----------ISPHDAWLIT------------------------RGTLTLDM-RVKRAAENAQKVAEFLHEH-KAVKKV 223 (331)
T ss_dssp -----------CCHHHHHHHH------------------------HHHHHHHH-HHHHHHHHHHHHHHHHHHC-TTCCCE
T ss_pred -----------CCHHHHHHHH------------------------cCcchHHH-HHHHHHHHHHHHHHHHHcC-CCeeEE
Confidence 0000001111 34443321 1344445555555555432 1110
Q ss_pred -CCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccC---------ccCChHHHhHHHHh
Q 006746 486 -HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYG---------SLHHIWFSDKYQKE 555 (632)
Q Consensus 486 -h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G---------~~c~~~~~~~~~~~ 555 (632)
++.-...|.++++++.. ..++++++|.+. +.+.+.+++++.||.++.+ ++|.........
T Consensus 224 ~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~-- 293 (331)
T 1pff_A 224 YYPGLPDHPGHEIAKKQM-KMFGSMIAFDVD-------GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVP-- 293 (331)
T ss_dssp ECTTSTTSTTHHHHHHHC-SSCCSEEEEECS-------SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSC--
T ss_pred ECCCCCCCccHHHHHhhC-CCCceEEEEEEC-------CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccC--
Confidence 00000123344444322 236889999875 3567888899999987654 455543211110
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
...+.. .+...+.||+|+|.++|.+||++|+++|+++
T Consensus 294 -~~~~~~----------------~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 294 -KEEREA----------------AGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp -HHHHHH----------------TTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred -HHHHHh----------------cCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 000000 1123479999999999999999999998764
No 50
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.91 E-value=7.6e-23 Score=216.80 Aligned_cols=352 Identities=9% Similarity=0.017 Sum_probs=226.2
Q ss_pred CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeC
Q 006746 117 IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTA 196 (632)
Q Consensus 117 ~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~ 196 (632)
.+++|+.+++++.+.+... + .++ ...+.+.|+.|++++|++ .++||+
T Consensus 8 ~~~~~~~v~~a~~~~~~~~--------~-----------~~~----------~~~~~~l~~~la~~~~~~----~v~~~~ 54 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSK--------Q-----------LTQ----------GKRSLLFEEALCEFLGVK----HALVFN 54 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSS--------C-----------CSS----------SHHHHHHHHHHHHHHTCS----EEEEES
T ss_pred CCCCCHHHHHHHHHHHHcC--------c-----------ccC----------ChHHHHHHHHHHHHhCCC----eEEEeC
Confidence 5788999999987644210 0 111 245679999999999986 699999
Q ss_pred CHHHHHHHHHhhCC--CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCce
Q 006746 197 NRTSAFKLLAESYP--FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQR 273 (632)
Q Consensus 197 naT~al~lv~~sl~--~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~ 273 (632)
|+|+|+.+++.++. +++||+|++. ..|++ .. ..++..|++++.++++ +++.+|+++|+++++++ +
T Consensus 55 ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~-~~----~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i~~~------~ 122 (375)
T 2fnu_A 55 SATSALLTLYRNFSEFSADRNEIITTPISFVA-TA----NMLLESGYTPVFAGIK-NDGNIDELALEKLINER------T 122 (375)
T ss_dssp CHHHHHHHHHHHSSCCCTTSCEEEECSSSCTH-HH----HHHHHTTCEEEECCBC-TTSSBCGGGSGGGCCTT------E
T ss_pred CHHHHHHHHHHHhcccCCCCCEEEECCCccHh-HH----HHHHHCCCEEEEeccC-CCCCCCHHHHHhhcCcC------c
Confidence 99999999999997 7899997754 56665 22 2345689999999987 44578999988877643 5
Q ss_pred eEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCC--CCCCCCcEEEEc--cccccCCCCCceEEEE
Q 006746 274 GLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFG--LSLVRPDFLICS--FYQIFGENPSGFGCLF 348 (632)
Q Consensus 274 ~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ld--ls~~~~Df~~~S--~hK~~G~~P~G~G~L~ 348 (632)
+++++.+. ||...|++ |.++|+++|+++++|+++..+.. ..+ +..++ |++++| .||++| | |+|+++
T Consensus 123 ~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~~-~i~~~s~s~~K~~~--~-g~g~~~ 193 (375)
T 2fnu_A 123 KAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSE--YQNKKVGGFA-LASVFSFHAIKPIT--T-AEGGAV 193 (375)
T ss_dssp EEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCE--ETTEETTSSS-SEEEEECCTTSSSC--C-SSCEEE
T ss_pred eEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCe--ECCeeccccC-CeEEEeCCCCCCcc--c-cCceEE
Confidence 77777766 99999999 99999999999999999988752 222 32333 555555 559998 8 899999
Q ss_pred EeC--CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhH
Q 006746 349 VKK--STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISE 426 (632)
Q Consensus 349 Vr~--~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~ 426 (632)
+++ +.++.+.+...+|..+. ..| .+ +.++..+.. .+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~-----~~~-----------------~~---~~~~~~~~~---------------~~~~ 233 (375)
T 2fnu_A 194 VTNDSELHEKMKLFRSHGMLKK-----DFF-----------------EG---EVKSIGHNF---------------RLNE 233 (375)
T ss_dssp EESCHHHHHHHHHHTBTTEEES-----SSS-----------------CE---EESSCCCBC---------------CCCH
T ss_pred EeCCHHHHHHHHHHHhcCCccc-----ccc-----------------cc---ccccccccC---------------CCCH
Confidence 963 35455544322222110 001 00 111111110 0011
Q ss_pred hhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCC
Q 006746 427 VRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR 506 (632)
Q Consensus 427 l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~r 506 (632)
+. .++.+....+++.+.++.+.+.+++.+.|.++ |.++++++......
T Consensus 234 ~~------------------------~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~~~~~~~ 281 (375)
T 2fnu_A 234 IQ------------------------SALGLSQLKKAPFLMQKREEAALTYDRIFKDN--------PYFTPLHPLLKDKS 281 (375)
T ss_dssp HH------------------------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTC--------SSEEESGGGCSSCC
T ss_pred HH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------CCccccCCCCCCCc
Confidence 11 33333334578899999999999999999887 66888776311112
Q ss_pred -CcEEEEEEccCCCCcc-CHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCc
Q 006746 507 -GPALAFNVFDWKREKI-EPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGIT 584 (632)
Q Consensus 507 -g~ivaFnv~~~~G~~i-~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 584 (632)
+.++.+.+.+. | + +...+.+.+.++||.++.+ |.+.......+. . +.... +. + ......+
T Consensus 282 ~~~~~~~~~~~~-~--~~~~~~l~~~L~~~gi~v~~~--~~p~~~~~~~~~--~-~~~~~-~~-----~----~~~~~~~ 343 (375)
T 2fnu_A 282 SNHLYPILMHQK-F--FTCKKLILESLHKRGILAQVH--YKPIYQYQLYQQ--L-FNTAP-LK-----S----AEDFYHA 343 (375)
T ss_dssp CCSCEEEEECGG-G--GGGHHHHHHHHHHTTEECBCC--CCCGGGSHHHHH--H-HCCCC-CH-----H----HHHHHHH
T ss_pred ceEEEEEEeCcc-c--cchHHHHHHHHHHCCCCcccc--ccccccchhhhc--C-CCccC-Ch-----H----HHHHHhC
Confidence 23444555431 1 3 4566666667789999843 444321111000 0 00000 00 0 0001236
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 585 VVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 585 ~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.||+|++.++|.+||+++++.|+++++.
T Consensus 344 ~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 371 (375)
T 2fnu_A 344 EISLPCHANLNLESVQNIAHSVLKTFES 371 (375)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999998764
No 51
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.91 E-value=2.8e-23 Score=224.21 Aligned_cols=200 Identities=9% Similarity=0.010 Sum_probs=141.1
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~~ 188 (632)
..-.||.+.+.....+.+++..+ .|+.+.+.|+.......+++|+++++++|++
T Consensus 28 ~~~p~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~-- 81 (398)
T 1gc0_A 28 LVPPVYQTATFTFPTVEYGAACF------------------------AGEQAGHFYSRISNPTLNLLEARMASLEGGE-- 81 (398)
T ss_dssp SSCCBCCCSCBCCC---------------------------------------------CCHHHHHHHHHHHHHHTCS--
T ss_pred cCCCccCCCccccCCHHHHHHhh------------------------cCCcCCCcccCCCChHHHHHHHHHHHHhCCC--
Confidence 45678888887766665553211 2222333344434577889999999999985
Q ss_pred CccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcC
Q 006746 189 DYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKG 267 (632)
Q Consensus 189 ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~ 267 (632)
..+++.|+|+|+.+++.++ +++||+|++. ..|++ ....+...++..|++++.++.+ +.++|+++|+++
T Consensus 82 --~~i~~~sG~~a~~~~l~~~-~~~gd~vl~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~i~~~- 150 (398)
T 1gc0_A 82 --AGLALASGMGAITSTLWTL-LRPGDEVLLGNTLYGC-TFAFLHHGIGEFGVKLRHVDMA------DLQALEAAMTPA- 150 (398)
T ss_dssp --EEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCSH-HHHHHHHTGGGGTCEEEEECTT------CHHHHHHHCCTT-
T ss_pred --cEEEECCHHHHHHHHHHHH-hcCCCEEEEeCCCchh-HHHHHHHHHHHcCCEEEEECCC------CHHHHHHhcCCC-
Confidence 3455666789999999988 6889997754 56765 3444344457789999988753 788999888653
Q ss_pred cCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc--e
Q 006746 268 KKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--F 344 (632)
Q Consensus 268 ~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G--~ 344 (632)
+++|++...+|+||...|++ |.++|+++|+++++|.++..+..-.++ .+++|+++.|+||++|. |.+ .
T Consensus 151 -----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~---~~~~d~~~~S~sK~~~~-~~~~~~ 221 (398)
T 1gc0_A 151 -----TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL---ELGADLVVHSATKYLSG-HGDITA 221 (398)
T ss_dssp -----EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG---GGTCSEEEEETTTTTTC-SSSCCC
T ss_pred -----CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCch---hhCceEEEECCccccCC-CCCCeE
Confidence 58999999999999999999 999999999999999998876411133 35789999999998885 554 5
Q ss_pred EEEEEeCCCc
Q 006746 345 GCLFVKKSTV 354 (632)
Q Consensus 345 G~L~Vr~~~~ 354 (632)
|+++++++.+
T Consensus 222 G~l~~~~~~~ 231 (398)
T 1gc0_A 222 GIVVGSQALV 231 (398)
T ss_dssp EEEEECHHHH
T ss_pred EEEEEChHHH
Confidence 9998887654
No 52
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.91 E-value=1.4e-23 Score=223.43 Aligned_cols=320 Identities=13% Similarity=0.103 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+++.|+++++++|++ .++||+|+|+|+.+++.++.+++||+|++ ...|++ .. ..++..|++++.++.+
T Consensus 36 ~~~~~l~~~la~~~~~~----~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~-~~----~~~~~~g~~~~~~~~~ 106 (373)
T 3frk_A 36 DEDKKFEQEFADYCNVN----YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIA-TA----LAVSYTGAKPIFVEPD 106 (373)
T ss_dssp HHHHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTH-HH----HHHHHHSCEEEEECEE
T ss_pred chHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHH-HH----HHHHHcCCEEEEEecc
Confidence 56679999999999985 58999999999999999998889999765 457775 22 3356679999999988
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC--
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR-- 325 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~-- 325 (632)
..++.+|+++|+++|+++ +++++ .+|+||...|++ |.++|+++|+++++|++|+.|. .++...++
T Consensus 107 ~~~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~---~~~~~~~~~~ 174 (373)
T 3frk_A 107 IRTYNIDPSLIESAITEK------TKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGS---LYKGMKVGSL 174 (373)
T ss_dssp TTTTEECGGGTGGGCCTT------EEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTC---EETTEETTSS
T ss_pred ccccCcCHHHHHHhcCCC------CeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCC---EECCEecccc
Confidence 566788999998887653 46666 567999999999 9999999999999999999876 24444444
Q ss_pred CcEEEEccc--cccCCCCCc-eEEEEEeCC-CccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 326 PDFLICSFY--QIFGENPSG-FGCLFVKKS-TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 326 ~Df~~~S~h--K~~G~~P~G-~G~L~Vr~~-~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
+|++++||+ |++| |.| .|+++.++. ..+.+++...+|... .+. . ...|
T Consensus 175 ~d~~~~S~~~~K~l~--~~g~gg~~~~~~~~~~~~~~~~~~~g~~~------~~~-~-------------------~~~g 226 (373)
T 3frk_A 175 GDAAGFSFYPAKNLG--SLGDGGAVVTNDKDLAEKIKALSNYGSEK------KYH-H-------------------IYKG 226 (373)
T ss_dssp SSEEEEECCTTSSSC--CSSSCEEEEESCHHHHHHHHHHHBTTCSB------TTB-C-------------------CSCC
T ss_pred ccEEEEeCcCCCccC--ccceeEEEEeCCHHHHHHHHHHHhcCccc------CCc-c-------------------cccc
Confidence 799999965 9888 534 455555443 333343322222110 000 0 0011
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
. ++. +..+. .++......+++.+.+|.+.+.+++.+.|
T Consensus 227 ~-~~~-----------------~~~~~------------------------aa~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (373)
T 3frk_A 227 F-NSR-----------------LDELQ------------------------AGFLRVKLKYLDKWNEERRKIAQKYIAGI 264 (373)
T ss_dssp C-BCC-----------------CCHHH------------------------HHHHHHHHHTHHHHHHHHHHHHHHHHHHC
T ss_pred c-cCC-----------------CCHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 000 11122 45555555578899999999999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCc----cCChHHHhHHHHhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGS----LHHIWFSDKYQKEKD 557 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~----~c~~~~~~~~~~~~~ 557 (632)
.++ + +++..... ......+.|.+.. .+...+.+.+.++||.++.++ +|.+.+...
T Consensus 265 ~~~--------~-~~~~~~~~-~~~~~~~~~~~~~-----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~------ 323 (373)
T 3frk_A 265 NNP--------N-VIIPVEAD-YAKHVWYTFVIRS-----EKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDL------ 323 (373)
T ss_dssp CCT--------T-EECCCCCT-TEECCCSSEEEEE-----SSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGG------
T ss_pred ccC--------c-eEeccCCC-CCceeeEEEEEEe-----CCHHHHHHHHHHCCCCcccCcCCccccChHHHhc------
Confidence 877 4 55543321 1233444555554 256677777777899999664 343322110
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+ +....... ......+.||+|++.++|.+||+++++.|++..+.
T Consensus 324 -----~--~~~~~~~~----~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 324 -----G--FKTGNFPI----AEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp -----C--CCTTSSHH----HHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred -----C--CCCCCCHH----HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 0 00000000 00112369999999999999999999999887654
No 53
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=5.7e-22 Score=208.89 Aligned_cols=326 Identities=10% Similarity=0.069 Sum_probs=226.5
Q ss_pred CCceEeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
++.+.|+.+-..+ .|+.+++++.+.+... + .++ .....+.|+++++++|+
T Consensus 16 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--------~-----------~y~----------~~~~~~l~~~la~~~~~ 66 (354)
T 3ly1_A 16 DNPIRINFNENPLGMSPKAQAAARDAVVKA--------N-----------RYA----------KNEILMLGNKLAAHHQV 66 (354)
T ss_dssp SSCEECSSCCCSSCCCHHHHHHHHHTGGGT--------T-----------SCC----------HHHHHHHHHHHHHHTTS
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHhhC--------c-----------CCC----------CCchHHHHHHHHHHhCC
Confidence 4567777665443 6788888877644311 0 111 13456899999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
+++ .|+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.++.+ +++.+++++|+++|+
T Consensus 67 ~~~--~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~-----~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~l~ 137 (354)
T 3ly1_A 67 EAP--SILLTAGSSEGIRAAIEAY-ASLEAQLVIPELTYGD-----GEHFAKIAGMKVTKVKML-DNWAFDIEGLKAAVA 137 (354)
T ss_dssp CGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEESSSCTH-----HHHHHHHTTCEEEEECCC-TTSCCCHHHHHHHHH
T ss_pred ChH--HEEEeCChHHHHHHHHHHH-hCCCCeEEECCCCchH-----HHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhc
Confidence 765 7999999999999999998 6889997754 45553 234567789999999987 467899999999998
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEeccccCCCC----CCCCC-CCCC-CCcEEEEcccc
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACALGPKD----MDSFG-LSLV-RPDFLICSFYQ 335 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~g~~----m~~ld-ls~~-~~Df~~~S~hK 335 (632)
+. ++++++++++.+|+||..+|++ +.++++. +|+++++|.++..... ...+. +... +.++++.|++|
T Consensus 138 ~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 213 (354)
T 3ly1_A 138 AY----SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSK 213 (354)
T ss_dssp TC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSS
T ss_pred cC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChh
Confidence 31 1358999999999999999999 8888877 9999999999764210 00111 1223 56799999999
Q ss_pred ccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhh
Q 006746 336 IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQ 415 (632)
Q Consensus 336 ~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~ 415 (632)
.+|.+..++|+++++++.++.+...... |
T Consensus 214 ~~g~~G~r~G~~~~~~~~~~~~~~~~~~------------~--------------------------------------- 242 (354)
T 3ly1_A 214 IHAMAGMRVGYAVAHPTVIALMGRYVAG------------E--------------------------------------- 242 (354)
T ss_dssp TTCCGGGCCEEEECCHHHHHHHGGGTTC------------S---------------------------------------
T ss_pred hccChhhhheeeecCHHHHHHHHHhcCC------------C---------------------------------------
Confidence 9984233478888876655444321100 0
Q ss_pred cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE
Q 006746 416 SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV 495 (632)
Q Consensus 416 ~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v 495 (632)
+.+.+...++. ++|+.. ..++.+.++.+.+.++|.+.|.++ |.
T Consensus 243 --~~~~~~~~a~~------------------------~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~------~~--- 285 (354)
T 3ly1_A 243 --KINFSGVDAAL------------------------ASMNDS--AFITYSKKSNDVSRQILLKALEDL------KL--- 285 (354)
T ss_dssp --CCCHHHHHHHH------------------------HHTTCH--HHHHHHHHHHHHHHHHHHHHHHHH------TC---
T ss_pred --CCCHHHHHHHH------------------------HHhcCH--HHHHHHHHHHHHHHHHHHHHHHHC------CC---
Confidence 01111122221 344322 236788889999999999999887 32
Q ss_pred EEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccc
Q 006746 496 KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNR 575 (632)
Q Consensus 496 ~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 575 (632)
+++. ..+..+.+.+.+ +...+.+.+.++||.++ |.+|.
T Consensus 286 ~~~~-----~~~~~~~~~~~~------~~~~~~~~l~~~gi~v~-g~~~~------------------------------ 323 (354)
T 3ly1_A 286 PYLP-----SEGNFVFHQLVV------PLKDYQTHMADAGVLIG-RAFPP------------------------------ 323 (354)
T ss_dssp CBCC-----CCSSEEEEECSS------CHHHHHHHHHHTTEECC-CCCTT------------------------------
T ss_pred eECC-----CCceEEEEECCC------CHHHHHHHHHHCCEEEe-ecCCC------------------------------
Confidence 2322 246677776654 45666666667899998 75432
Q ss_pred cccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 576 KDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 576 ~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
..+.||+|++ |.+||+++++.|++++...
T Consensus 324 ------~~~~iRis~~---~~~~i~~~~~~l~~~l~~~ 352 (354)
T 3ly1_A 324 ------ADNWCRISLG---TPQEMQWVADTMREFRKKS 352 (354)
T ss_dssp ------CTTEEEEECC---CHHHHHHHHHHHHHHHHTT
T ss_pred ------CCCEEEEEcC---CHHHHHHHHHHHHHHHHhh
Confidence 2358999976 8999999999999988754
No 54
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.91 E-value=1.1e-21 Score=213.34 Aligned_cols=339 Identities=12% Similarity=0.094 Sum_probs=232.6
Q ss_pred CceEeecCCCCC----CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc
Q 006746 108 NHTCLDYFGIGL----FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL 183 (632)
Q Consensus 108 ~~vyLD~ag~gl----~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l 183 (632)
+.-|+|.++..+ .++.+++++.+.+.... .++..+...+|. .+...+.++.|++++
T Consensus 63 g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~------------------~~~~~~~~~~G~--~~~~~~l~~~la~~~ 122 (427)
T 2w8t_A 63 GKDTILLGTYNYMGMTFDPDVIAAGKEALEKFG------------------SGTCGSRMLNGT--FHDHMEVEQALRDFY 122 (427)
T ss_dssp TEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHC------------------SCCCSCTTTTCC--CHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccccCCCCHHHHHHHHHHHHHhC------------------CCCcccccccCC--cHHHHHHHHHHHHHh
Confidence 456788777642 55777777655332110 011112222232 256789999999999
Q ss_pred CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHH
Q 006746 184 NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 184 ~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
|++ .++++.|+|+|+..++.++ .++||.|++....|.... ..++..|++++.++. +|+++|+++|
T Consensus 123 g~~----~~i~~~sGs~a~~~al~~l-~~~gd~vl~~~~~h~~~~----~~~~~~g~~~~~~~~------~d~~~le~~l 187 (427)
T 2w8t_A 123 GTT----GAIVFSTGYMANLGIISTL-AGKGEYVILDADSHASIY----DGCQQGNAEIVRFRH------NSVEDLDKRL 187 (427)
T ss_dssp TCS----EEEEESCHHHHHHHHHHHH-SCTTCEEEEETTCCHHHH----HHHHHSCSEEEEECT------TCHHHHHHHH
T ss_pred CCC----ceEEecCcHHHHHHHHHHh-cCCCCEEEECCcccHHHH----HHHHHcCCeeEEeCC------CCHHHHHHHH
Confidence 985 3566778888999888887 688999876654443222 334567999887753 5889999999
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC--------CCCCCCCCcEEEEccc
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS--------FGLSLVRPDFLICSFY 334 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~--------ldls~~~~Df~~~S~h 334 (632)
.+.. ..++++|++.++.|+||...|++ |.++|+++|+++++|.++..+.- .. +++. .++|+++.|++
T Consensus 188 ~~~~--~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~-~~~g~~~~~~~~~~-~~~di~~~s~s 263 (427)
T 2w8t_A 188 GRLP--KEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFF-GPNGRGVYEAQGLE-GQIDFVVGTFS 263 (427)
T ss_dssp HTSC--SSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTS-STTSCCHHHHTTCT-TCCSEEEEESS
T ss_pred Hhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCchHhhcCCC-cCCcEEEecch
Confidence 7631 12468999999999999999999 99999999999999999987641 11 5553 37899999999
Q ss_pred cccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhh
Q 006746 335 QIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMR 414 (632)
Q Consensus 335 K~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~ 414 (632)
|++| +.| |+++.+++.++.+.+.. . .+. ..
T Consensus 264 K~~g--~~g-G~v~~~~~l~~~l~~~~-----------~--------------------~~~--~~-------------- 293 (427)
T 2w8t_A 264 KSVG--TVG-GFVVSNHPKFEAVRLAC-----------R--------------------PYI--FT-------------- 293 (427)
T ss_dssp STTC--SCC-EEEEECCTTGGGGGGTC-----------H--------------------HHH--SS--------------
T ss_pred hhhc--cCC-CEEEeCHHHHHHHHHhc-----------c--------------------ccc--cc--------------
Confidence 9999 557 99999988776554320 0 000 00
Q ss_pred hcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCc
Q 006746 415 QSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNAL 494 (632)
Q Consensus 415 ~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~ 494 (632)
++.+...+.++. ++|+.+.. ++.+.++.+.+.++|++.|.++ |
T Consensus 294 --~~~~~~~~aa~~------------------------~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~------g--- 336 (427)
T 2w8t_A 294 --ASLPPSVVATAT------------------------TSIRKLMT--AHEKRERLWSNARALHGGLKAM------G--- 336 (427)
T ss_dssp --CCCCHHHHHHHH------------------------HHHHHHTS--CHHHHHHHHHHHHHHHHHHHHH------T---
T ss_pred --CCCCHHHHHHHH------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc------C---
Confidence 011112222222 56666542 5788999999999999999987 4
Q ss_pred EEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccc
Q 006746 495 VKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNN 574 (632)
Q Consensus 495 v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 574 (632)
+.++++. ..++++.+.+.+. .....+.+.+.++||.++.|..+..
T Consensus 337 ~~~~~~~---~~~~~~~~~~~~~----~~~~~l~~~L~~~Gi~v~~~~~~~~---------------------------- 381 (427)
T 2w8t_A 337 FRLGTET---CDSAIVAVMLEDQ----EQAAMMWQALLDGGLYVNMARPPAT---------------------------- 381 (427)
T ss_dssp CEESCSS---CCSSEEEEEESSH----HHHHHHHHHHHHTTEECEEECTTTS----------------------------
T ss_pred CcccCCC---CCCCEEEEEECCH----HHHHHHHHHHHHCCeEEeeeCCCCC----------------------------
Confidence 3455442 2678888887641 2344455544456999987643221
Q ss_pred ccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 575 RKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 575 ~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.+.||+|++.++|.+||+++++.|+++++.
T Consensus 382 -----~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 382 -----PAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp -----CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 113468999999999999999999999998765
No 55
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.90 E-value=2.7e-22 Score=215.18 Aligned_cols=340 Identities=11% Similarity=0.077 Sum_probs=230.1
Q ss_pred CCceEeecCCCCCC----CHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIGLF----SYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (632)
Q Consensus 107 ~~~vyLD~ag~gl~----~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~ 182 (632)
++..|+|.++..++ ++.+++++.+.+... + . ....+.+.+| ......+.|++|+++
T Consensus 43 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~----~----~----------~~~~~~~~~g--~~~~~~~l~~~la~~ 102 (401)
T 1fc4_A 43 DGSHVINFCANNYLGLANHPDLIAAAKAGMDSH----G----F----------GMASVRFICG--TQDSHKELEQKLAAF 102 (401)
T ss_dssp TSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHH----C----S----------CCCSCHHHHC--CBHHHHHHHHHHHHH
T ss_pred CCccEEEeeccCcccccCCHHHHHHHHHHHHHh----C----C----------CCCCCCcccC--CcHHHHHHHHHHHHH
Confidence 45679998887654 678888766533211 0 0 0001111112 135678999999999
Q ss_pred cCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 183 LNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 183 l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
+|++ +.+++.|+|+|+.+++.++ .++||+|++.. .|.+ . ...++..|++++.++. ++.++|++
T Consensus 103 ~g~~----~~i~~~sGs~a~~~~~~~~-~~~gd~v~~~~~~~~~-~----~~~~~~~g~~~~~~~~------~d~~~l~~ 166 (401)
T 1fc4_A 103 LGME----DAILYSSCFDANGGLFETL-LGAEDAIISDALNHAS-I----IDGVRLCKAKRYRYAN------NDMQELEA 166 (401)
T ss_dssp HTCS----EEEEESCHHHHHHTTHHHH-CCTTCEEEEETTCCHH-H----HHHHHTSCSEEEEECT------TCHHHHHH
T ss_pred hCCC----cEEEeCChHHHHHHHHHHH-cCCCCEEEEcchhHHH-H----HHHHHHcCCceEEECC------CCHHHHHH
Confidence 9986 2456667789999988888 68899987655 4433 2 2345678999988763 47889999
Q ss_pred HHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC--------CCCCCCCCcEEEEc
Q 006746 262 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS--------FGLSLVRPDFLICS 332 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~--------ldls~~~~Df~~~S 332 (632)
+|++......++++|++++.+|+||..+|++ |.++|+++|+++++|.++..+.. .+ +++.. ++|+++.|
T Consensus 167 ~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~-~~~g~~~~~~~~~~~-~~di~~~s 244 (401)
T 1fc4_A 167 RLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV-GENGRGSHEYCDVMG-RVDIITGT 244 (401)
T ss_dssp HHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTS-STTSCCHHHHTTCTT-CCSEEEEE
T ss_pred HHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECccccccc-CCCCCccHHHcCCCc-CCcEEEec
Confidence 8875210001358999999999999999999 99999999999999999864431 11 55543 67999999
Q ss_pred cccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhh
Q 006746 333 FYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIE 412 (632)
Q Consensus 333 ~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~ 412 (632)
++|+++. +.| |+++++++.++.+.... . .| .+
T Consensus 245 ~sK~~~~-~~g-G~~~~~~~~~~~l~~~~-----------~-~~-----------------~~----------------- 276 (401)
T 1fc4_A 245 LGKALGG-ASG-GYTAARKEVVEWLRQRS-----------R-PY-----------------LF----------------- 276 (401)
T ss_dssp SSSTTCS-SSC-EEEEECHHHHHHHHHHC-----------H-HH-----------------HH-----------------
T ss_pred chhhccC-CCC-EEEEcCHHHHHHHHHhC-----------c-Cc-----------------ee-----------------
Confidence 9998832 557 99999877655443210 0 00 00
Q ss_pred hhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCC
Q 006746 413 MRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGN 492 (632)
Q Consensus 413 ~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~ 492 (632)
.++.+.....++. ++|+.+.. ++.+.++.+.+.+++.+.|.++ |.
T Consensus 277 ---~~~~~~~~~~a~~------------------------~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~------g~ 321 (401)
T 1fc4_A 277 ---SNSLAPAIVAASI------------------------KVLEMVEA--GSELRDRLWANARQFREQMSAA------GF 321 (401)
T ss_dssp ---SCCCCHHHHHHHH------------------------HHHHHHHT--CHHHHHHHHHHHHHHHHHHHHT------TC
T ss_pred ---CCCCCHHHHHHHH------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc------CC
Confidence 0111122222232 66776654 4788899999999999999987 43
Q ss_pred CcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccc
Q 006746 493 ALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSD 572 (632)
Q Consensus 493 p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 572 (632)
+++ | ..+.++.+.+.+. .+...+.+.+.++||.++.|..|..
T Consensus 322 ---~~~-~----~~~~~~~~~~~~~----~~~~~l~~~l~~~gi~v~~~~~~~~-------------------------- 363 (401)
T 1fc4_A 322 ---TLA-G----ADHAIIPVMLGDA----VVAQKFARELQKEGIYVTGFFYPVV-------------------------- 363 (401)
T ss_dssp ---CBC-C----SSSSEEEEEEECH----HHHHHHHHHHHHTTEECCEECTTSS--------------------------
T ss_pred ---ccc-C----CCCCEEEEEcCCh----HHHHHHHHHHHHCCcEEeeecCCCC--------------------------
Confidence 233 2 3678888887541 3445565555567999987754321
Q ss_pred ccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 573 NNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 573 ~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.+.||+|++.++|.+|++++++.|+++++.
T Consensus 364 -------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 364 -------PKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp -------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 112358999999999999999999999998764
No 56
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.90 E-value=7.9e-23 Score=226.72 Aligned_cols=311 Identities=10% Similarity=0.080 Sum_probs=228.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCC----CCC---CeEEEec-cccchhhHHHHHHHHhcCC
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPF----MSV---KNLLTVY-DYESEAVEAMIRTSEKRGA 240 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~----~~g---d~ilt~~-d~~s~~v~~~~~~a~~~G~ 240 (632)
.++.+++++.+++++|++.+...++||+|+|+|+.+++.++.- ++| ++|++.. .|++ ....++..|+
T Consensus 106 ~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~-----~~~~~~~~G~ 180 (497)
T 3mc6_A 106 RKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAG-----FDKAAYYFGM 180 (497)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHH-----HHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHH-----HHHHHHHcCC
Confidence 4677889999999999983334799999999999999988621 024 7777654 4443 2445667899
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC-----
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK----- 314 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~----- 314 (632)
+++.++++..++.+|+++|+++|+++ +++|++++.+|.||...|++ |.++|+++|+++++|+++.++.
T Consensus 181 ~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~ 254 (497)
T 3mc6_A 181 KLRHVELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFME 254 (497)
T ss_dssp EEEEECBCTTTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGT
T ss_pred eEEEEecCcccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhh
Confidence 99999998437789999999888653 58999999999999999999 9999999999999999976311
Q ss_pred -----CCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 315 -----DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 315 -----~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
.+.+++....++|++++++||+++. |.|+|+++++++.+........ ..|....
T Consensus 255 ~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~-~~~~g~~~~~~~~~~~~~~~~~-----------~~~~~~~--------- 313 (497)
T 3mc6_A 255 KAGYKNLPLLDFRVPGVTSISCDTHKYGFA-PKGSSVIMYRNSDLRMHQYYVN-----------PAWTGGL--------- 313 (497)
T ss_dssp TTTCCSCCCCSTTSTTCCEEEEETTTTTCC-CSSCEEEECSSHHHHTTTSCCB-----------TTCTTSC---------
T ss_pred hhcccCCccccccCCCCcEEEECchhhcCC-CCCceeEEecCHHHHhhhhccc-----------ccccCCC---------
Confidence 1124677778999999999997543 8899999999876533221100 0010000
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 469 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r 469 (632)
.+++.+ .|+.....+.++. .+++.+...|+..+.++
T Consensus 314 ----------~~~~~~----------~g~~~~~~~~a~~------------------------aal~~l~~~~~~~~~~~ 349 (497)
T 3mc6_A 314 ----------YGSPTL----------AGSRPGAIVVGCW------------------------ATMVNMGENGYIESCQE 349 (497)
T ss_dssp ----------BCCSSS----------CSSCBHHHHHHHH------------------------HHHHHHHHHHHHHHHHH
T ss_pred ----------cCCcCc----------ccCCcchhHHHHH------------------------HHHHHHhHHHHHHHHHH
Confidence 011111 1222222233343 67888877889999999
Q ss_pred HHHHHHHHHHHHHc-cCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 470 GRCLINWLVNALMK-LQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 470 ~~~L~~~L~~~L~~-l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
...+++++.+.|.+ + |.++++++ .++++++|...+ ++...+.+.+.++||.++.+.
T Consensus 350 ~~~~~~~l~~~L~~~~--------~g~~~~~~----~~~~~v~~~~~~-----~~~~~l~~~L~~~Gi~v~~~~------ 406 (497)
T 3mc6_A 350 IVGAAMKFKKYIQENI--------PDLDIMGN----PRYSVISFSSKT-----LNIHELSDRLSKKGWHFNALQ------ 406 (497)
T ss_dssp HHHHHHHHHHHHHHSC--------TTCEECSC----CCSSEEEEECTT-----TTHHHHHHHHHTTTCBCEECC------
T ss_pred HHHHHHHHHHHHHhcC--------CCEEEecC----CCeeEEEEeCCC-----CCHHHHHHHHHhCCEEEecCC------
Confidence 99999999999998 5 66788876 367899987654 567778777777899776331
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+|+++. .+|.+||+++++.|++.+..
T Consensus 407 ---------------------------------~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 407 ---------------------------------KPVALHMAFT-RLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp ---------------------------------SSCCEEEECC-TTTTCTHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCeEEEEEe-CCCHHHHHHHHHHHHHHHHH
Confidence 1236789888 78999999999999998865
No 57
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.90 E-value=1.1e-22 Score=216.95 Aligned_cols=294 Identities=14% Similarity=0.134 Sum_probs=212.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc--C
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS--W 249 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~--~ 249 (632)
.+.|+.|+++++++++ .|+||+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.++.+ .
T Consensus 64 ~~l~~~la~~~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~~~~ 135 (381)
T 1v2d_A 64 PALREALAEEFAVEPE--SVVVTSGATEALYVLLQSL-VGPGDEVVVLEPFFDV-Y----LPDAFLAGAKARLVRLDLTP 135 (381)
T ss_dssp HHHHHHHHHHHTSCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEECEEET
T ss_pred HHHHHHHHHhcCCChh--hEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEEeCCCCC
Confidence 4799999999999876 6999999999999999998 788999765 456664 2 23457789999999986 3
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCC-CCCCCCC--
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKD-MDSFGLS-- 322 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~-m~~ldls-- 322 (632)
+++.+++++|++++++ +++++++++.+|+||..+| ++ |+++|+++|+++++|.++..... ....++.
T Consensus 136 ~~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~ 209 (381)
T 1v2d_A 136 EGFRLDLSALEKALTP------RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF 209 (381)
T ss_dssp TEEECCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH
T ss_pred ccCCcCHHHHHHhcCc------CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh
Confidence 4567899999887754 3589999999999999998 67 88999999999999999875310 0122222
Q ss_pred CCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 323 LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
..+.|+++.|+||++| +.| +|+++++++.++.+.... .. ..
T Consensus 210 ~~~~~~~~~s~sK~~~--~~G~r~G~~~~~~~~~~~~~~~~--------------------------------~~---~~ 252 (381)
T 1v2d_A 210 APERTFTVGSAGKRLE--ATGYRVGWIVGPKEFMPRLAGMR--------------------------------QW---TS 252 (381)
T ss_dssp CTTTEEEEEEHHHHTT--CGGGCCEEEECCTTTHHHHHHHH--------------------------------HH---HT
T ss_pred cCCCEEEEeechhhcC--CcccceEEEEeCHHHHHHHHHHH--------------------------------hh---cc
Confidence 3578999999999999 558 899999877655442210 00 00
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHH-hhCHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD-SLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~-~~Gl~~I~~r~~~L~~~L~~ 479 (632)
.+.+.+...++. .+|+... ..+++.+.++.+.+.++|.+
T Consensus 253 ----------------~~~~~~~~~a~~------------------------~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (381)
T 1v2d_A 253 ----------------FSAPTPLQAGVA------------------------EALKLARREGFYEALREGYRRRRDLLAG 292 (381)
T ss_dssp ----------------SSCCHHHHHHHH------------------------HHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ----------------cCCCcHHHHHHH------------------------HHHhCcccHHHHHHHHHHHHHHHHHHHH
Confidence 011112222222 5666442 23578889999999999999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
.|.++ | ++++.|. .+..+.+.+.+. + +.+++.++||.++.|..|...
T Consensus 293 ~L~~~------g---~~~~~~~----~~~~~~~~~~~~-----~---~~~~l~~~gi~v~~g~~~~~~------------ 339 (381)
T 1v2d_A 293 GLRAM------G---LRVYVPE----GTYFLMAELPGW-----D---AFRLVEEARVALIPASAFYLE------------ 339 (381)
T ss_dssp HHHHT------T---CCEECCS----BSSEEEEECTTC-----C---HHHHHHHTCEECEEGGGGCSS------------
T ss_pred HHHHC------C---CEecCCC----cceEEEEecChH-----h---HHHHHHhCCEEEecchHhCCC------------
Confidence 99886 4 3455552 245666666541 2 778888899999877544320
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.+.||+|++. +.+||+++++.|+++++.
T Consensus 340 --------------------~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 340 --------------------DPPKDLFRFAFCK--TEEELHLALERLGRVVNS 370 (381)
T ss_dssp --------------------SCCTTEEEEECCS--CHHHHHHHHHHHHHHC--
T ss_pred --------------------CCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 1134699999987 999999999999998765
No 58
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.90 E-value=8.3e-23 Score=219.03 Aligned_cols=351 Identities=11% Similarity=0.054 Sum_probs=234.4
Q ss_pred ceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccc-hhHHHHHHHHHHHHHcCCCC
Q 006746 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ-ESGLESAMKKRIMDFLNISE 187 (632)
Q Consensus 109 ~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~-~~~~~~~~R~~ia~~l~a~~ 187 (632)
..++|+++.+++|+.+++++.+.+... +..+++.+....|.. ..++.+.+|+.+++++|+++
T Consensus 24 ~~~~~~~~~~~~~~~v~~a~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~ 86 (405)
T 2vi8_A 24 AKIELIASENFVSRAVMEAQGSVLTNK-----------------YAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEH 86 (405)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSGGGGC-----------------CCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred cceeeccCcccCCHHHHHHHHHHhhcc-----------------cccCCCCccccccchHHHHHHHHHHHHHHHHhCCCc
Confidence 457888999999999999987654210 001233332211222 23555568999999999974
Q ss_pred CCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhH-HHH-HHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 188 NDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVE-AMI-RTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 188 ~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~-~~~-~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
..+++.|+|+|+.+++.++ +++||+|++. ..|++ ... +.. .. ...++++..++++..++.+|+++|+++|+
T Consensus 87 ---~~i~~~sGt~a~~~a~~~~-~~~gd~Vl~~~~~~~~-~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~l~~~i~ 160 (405)
T 2vi8_A 87 ---ANVQPHSGAQANMAVYFTV-LEHGDTVLGMNLSHGG-HLTHGSPVNF-SGVQYNFVAYGVDPETHVIDYDDVREKAR 160 (405)
T ss_dssp ---EECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTC-CTTTTCTTSH-HHHHSEEEEECBCTTTCSBCHHHHHHHHH
T ss_pred ---eEEEecCcHHHHHHHHHHh-cCCCCEEEEecccccc-hhcccchhhh-ccceeEEEecccccccCCcCHHHHHHHHH
Confidence 3555556699999999998 7899997654 45554 221 110 11 11234777777653456789999999998
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC---CCCCCCCCCCCCcEEEEccccccCCC
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK---DMDSFGLSLVRPDFLICSFYQIFGEN 340 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~---~m~~ldls~~~~Df~~~S~hK~~G~~ 340 (632)
+. ++++++++. +..|...|++ |.++|+++|+++++|.++..+. ++....+ ..+|++++|+||++|.
T Consensus 161 ~~-----~~~~v~~~~--~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~--~~~di~~~s~sK~~~g- 230 (405)
T 2vi8_A 161 LH-----RPKLIVAAA--AAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV--PYAHFVTTTTHKTLRG- 230 (405)
T ss_dssp HH-----CCSEEEECC--SSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST--TTCSEEEEESSSTTCC-
T ss_pred hc-----CCeEEEEeC--CCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCcc--ccCCEEEEeccccCCC-
Confidence 62 136777632 3457888999 9999999999999999987532 1112111 2689999999998864
Q ss_pred CCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcc
Q 006746 341 PSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLE 420 (632)
Q Consensus 341 P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~ 420 (632)
|.| |++++++++++.+.+.... | ..|+++
T Consensus 231 ~~g-G~~~~~~~~~~~l~~~~~~------------~--------------------------------------~~~~~~ 259 (405)
T 2vi8_A 231 PRG-GMILCQEQFAKQIDKAIFP------------G--------------------------------------IQGGPL 259 (405)
T ss_dssp CSC-EEEEECHHHHHHHHHHHTT------------T--------------------------------------TCSSCC
T ss_pred CCC-eEEEEcHHHHHHHHhhhcc------------c--------------------------------------ccCCCC
Confidence 778 9999987665444321000 0 012223
Q ss_pred cchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECC
Q 006746 421 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGP 500 (632)
Q Consensus 421 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp 500 (632)
...+.++. .+|+.+...+++.+.++.+.+.++|.+.|.++ | +++++|
T Consensus 260 ~~~~aa~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~ 306 (405)
T 2vi8_A 260 MHVIAAKA------------------------VAFGEALQDDFKAYAKRVVDNAKRLASALQNE------G---FTLVSG 306 (405)
T ss_dssp HHHHHHHH------------------------HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT------T---CEEGGG
T ss_pred HHHHHHHH------------------------HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC------C---CeEecC
Confidence 33334443 67777765678999999999999999999987 3 456665
Q ss_pred CCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCC
Q 006746 501 KIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 580 (632)
Q Consensus 501 ~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 580 (632)
. ..+.++.+.+.+. | ++...+.+.+.++||.++.|..+... . ..
T Consensus 307 ~---~~~~~~~~~~~~~-~--~~~~~~~~~l~~~gi~v~~g~~~~~~----~--------------------------~~ 350 (405)
T 2vi8_A 307 G---TDNHLLLVDLRPQ-Q--LTGKTAEKVLDEVGITVNKNTIPYDP----E--------------------------SP 350 (405)
T ss_dssp S---CSSSEEEEECGGG-T--CCHHHHHHHHHHHTEECEEECCTTCS----S--------------------------CT
T ss_pred C---CCceEEEEEccCC-C--CCHHHHHHHHHHcCceeccCcCcccc----C--------------------------CC
Confidence 2 2467777777642 1 46677777777889999987543100 0 01
Q ss_pred CCCcEEEEccCCC----CCHHHHHHHHHHHHHhhhh
Q 006746 581 LGITVVTASLGYL----ANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 581 ~~~~~VRvSlg~~----~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.+|+|++.+ .+.+|++++++.|+++++.
T Consensus 351 ~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 351 FVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred CCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence 1235799999984 5799999999999998754
No 59
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.90 E-value=1.8e-21 Score=217.56 Aligned_cols=329 Identities=12% Similarity=0.051 Sum_probs=217.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-------------CCCCeEEEec-cccchhhHHHHHH
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPF-------------MSVKNLLTVY-DYESEAVEAMIRT 234 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~-------------~~gd~ilt~~-d~~s~~v~~~~~~ 234 (632)
.++.+++++.+++++|.+++...++||+|+|+|+..++.+... .+++.|+++. .|++ + ...
T Consensus 134 ~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s--~---~~~ 208 (511)
T 3vp6_A 134 VLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS--I---KKA 208 (511)
T ss_dssp HHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH--H---HHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH--H---HHH
Confidence 5777889999999999985444799999999998876554321 1345666554 5554 2 344
Q ss_pred HHhcCC---EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccc
Q 006746 235 SEKRGA---RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACA 310 (632)
Q Consensus 235 a~~~G~---~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq 310 (632)
++..|+ +++.++.+ +++.+|+++|+++|.++......++++++++.+|.||..-|++ |+++|+++|++++||+++
T Consensus 209 ~~~~g~g~~~~~~v~~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~ 287 (511)
T 3vp6_A 209 GAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAW 287 (511)
T ss_dssp HHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred HHHcCCCCCcEEEeecC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccc
Confidence 566777 89999998 6789999999999986532223478999999999999999999 999999999999999998
Q ss_pred cCCCCCC---CCCCC-CCCCcEEEEccccccCCCCCceEEEEEeCCC-cccc---CCCCCCCceeecccccccccccccC
Q 006746 311 LGPKDMD---SFGLS-LVRPDFLICSFYQIFGENPSGFGCLFVKKST-VPIL---VDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 311 ~~g~~m~---~ldls-~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~-~~~L---~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
.++.-.. ...+. ..++|++++++||++|. |.|+|+++++++. +..+ .+.+..+.-. .....+
T Consensus 288 ~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~---~~~~~~------ 357 (511)
T 3vp6_A 288 GGGLLMSRKHRHKLNGIERANSVTWNPHKMMGV-LLQCSAILVKEKGILQGCNQMHASYLFQQDK---HYDVSY------ 357 (511)
T ss_dssp GGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCC-CSCCEEEEESSTTHHHHHHCCCCTTTCCSSC---SSCGGG------
T ss_pred hhhHhhChhhhhhccCCccCCEEEECcccccCC-CcCeEEEEEeCHHHHHHHhccCCccccCccc---cccccc------
Confidence 7764100 11122 23679999999998876 8999999999864 2222 1222110000 000000
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
+. ..-+.. .|. .. .+.++- .+|..+...|
T Consensus 358 --~~------------~~~~~~-----------~~r-~~-~al~~~------------------------~al~~~g~~g 386 (511)
T 3vp6_A 358 --DT------------GDKAIQ-----------CGR-HV-DIFKFW------------------------LMWKAKGTVG 386 (511)
T ss_dssp --CC------------GGGSSC-----------SSC-CC-CHHHHH------------------------HHHHHHHHHH
T ss_pred --Cc------------cCCCCC-----------CCC-ch-HHHHHH------------------------HHHHHHhHHH
Confidence 00 000000 000 00 122222 5677666678
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC--CCcc-----------CHHHHHH
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK--REKI-----------EPVLVQK 529 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~--G~~i-----------~~~~V~k 529 (632)
++.+.+|...+++++.+.|.++ |.++++.+. ....++|+|.+.... +..- ..++.++
T Consensus 387 l~~~~~~~~~~a~~l~~~L~~~--------pg~~l~~~~--~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~ 456 (511)
T 3vp6_A 387 FENQINKCLELAEYLYAKIKNR--------EEFEMVFNG--EPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKAL 456 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSC--------TTEEESSSS--CCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--------CCEEEEecC--CCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 779998742 236788999875421 1000 0122333
Q ss_pred HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHH
Q 006746 530 LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQ 608 (632)
Q Consensus 530 la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~ 608 (632)
|.++..+.+..+ . ...+.+.+|+++ +..+|.+||+++++.|++
T Consensus 457 L~~~G~~~~~~~------------------------------~------~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~ 500 (511)
T 3vp6_A 457 MMESGTTMVGYQ------------------------------P------QGDKANFFRMVISNPAATQSDIDFLIEEIER 500 (511)
T ss_dssp HHHHTSCEEEEE------------------------------E------ETTEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred HHhcCCEEEEEE------------------------------E------eCCceEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 333322222210 0 011235799999 899999999999999987
Q ss_pred hh
Q 006746 609 FL 610 (632)
Q Consensus 609 ~l 610 (632)
+-
T Consensus 501 ~~ 502 (511)
T 3vp6_A 501 LG 502 (511)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 60
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.90 E-value=3.3e-22 Score=211.83 Aligned_cols=339 Identities=10% Similarity=0.066 Sum_probs=234.6
Q ss_pred CCCCCCchhHHHHHHhhccCcCCCCceEeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccccccccccc
Q 006746 84 YPQYFDTYQIDQIRAKEYYQLSLSNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL 162 (632)
Q Consensus 84 ~p~y~~~~~~d~iR~~ef~~L~~~~~vyLD~ag~gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~ 162 (632)
.++|........+++ +|.. ++.++|+.+-..+ .|+.+++++.+.+.... .++...
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~---~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-------------------~y~~~~- 66 (365)
T 3get_A 11 LSNYEPGKDIEVIAK-EYGV---KEVIKLASNENPFGTPPKAIECLRQNANKAH-------------------LYPDDS- 66 (365)
T ss_dssp SCCCCCCCCHHHHHH-HTTC---SCCEECSSCCCTTCSCHHHHHHHHHHGGGTT-------------------SCCCTT-
T ss_pred cCCCCCCCCHHHHHH-hcCC---CceEEecCCCCCCCCCHHHHHHHHHHHHhhc-------------------cCCCCC-
Confidence 455655455666665 3653 5678888765543 67888888765432110 111111
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCE
Q 006746 163 LHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 163 ~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~ 241 (632)
. .+.|++|++++|++++ .|+||+|+|+|+.+++.++ +++||+|++.. .|++ ....++..|++
T Consensus 67 ------~---~~lr~~la~~~~~~~~--~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~-----~~~~~~~~g~~ 129 (365)
T 3get_A 67 ------M---IELKSTLAQKYKVQNE--NIIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAM-----YEIYAKQCGAK 129 (365)
T ss_dssp ------C---HHHHHHHHHHHTCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTH-----HHHHHHHHTCE
T ss_pred ------h---HHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHH-----HHHHHHHcCCE
Confidence 1 3789999999999765 7999999999999999998 78999987653 4542 23456778999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHh--hCCcEEEEecccc------C
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQ--ENDWHILIDACAL------G 312 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~--~~g~~vlvDaaq~------~ 312 (632)
++.++++..++ +++++|+++++++ ++++++++.+|+||..+|++ +.++++ ++|+++++|.++. .
T Consensus 130 ~~~v~~~~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~ 202 (365)
T 3get_A 130 CYKTQSITHNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKD 202 (365)
T ss_dssp EEECSSSSCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHC
T ss_pred EEEEecCCCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccC
Confidence 99998832566 8999999988753 58999999999999999999 888887 6799999999987 4
Q ss_pred CCCCCCCCC----CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 313 PKDMDSFGL----SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 313 g~~m~~ldl----s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
+. ...+. ...+.++++.|++|.+|.+..++|+++++++.++.+..... .|
T Consensus 203 ~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~------------~~------------ 256 (365)
T 3get_A 203 SK--KHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRA------------PF------------ 256 (365)
T ss_dssp GG--GCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSC------------TT------------
T ss_pred Cc--ccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcC------------CC------------
Confidence 32 11221 22466899999999998433357999987665544422100 00
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
+++.+...++. ++|+.. ..++.+.+
T Consensus 257 -----------------------------~~~~~~~~~~~------------------------~~l~~~--~~~~~~~~ 281 (365)
T 3get_A 257 -----------------------------NVSNLALKAAV------------------------AAMDDD--EFTEKTLE 281 (365)
T ss_dssp -----------------------------CSCHHHHHHHH------------------------HHHTCH--HHHHHHHH
T ss_pred -----------------------------CcCHHHHHHHH------------------------HHhCCH--HHHHHHHH
Confidence 01111112222 444422 24678889
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
+.+.+.+++.+.|.++ | ++++.+ .+..+.+.+.+. +...+.+.+.++||.++.|..|.
T Consensus 282 ~~~~~~~~l~~~l~~~------g---~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~~~~--- 339 (365)
T 3get_A 282 NNFSQMELYKEFAKKH------N---IKIIDS-----YTNFITYFFDEK-----NSTDLSEKLLKKGIIIRNLKSYG--- 339 (365)
T ss_dssp HHHHHHHHHHHHHHHT------T---CEECCC-----SSSEEEEECSSS-----CHHHHHHHHHTTTEECEECGGGT---
T ss_pred HHHHHHHHHHHHHHhC------C---CEECCC-----CCeEEEEECCCC-----CHHHHHHHHHHCCEEEEECccCC---
Confidence 9999999999999887 3 445433 456677776542 56667666667899998763211
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
.+.||+|++ +.+|++++++.|++++
T Consensus 340 ----------------------------------~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 340 ----------------------------------LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp ----------------------------------CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 358999987 8999999999999876
No 61
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.90 E-value=3.1e-23 Score=225.97 Aligned_cols=171 Identities=11% Similarity=0.045 Sum_probs=133.9
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+.......+++|++|++++|++ .+++++|+|+|+++++.++ +++||+|++. .+|++ ....+...+++.|+++
T Consensus 76 y~r~~~p~~~~le~~lA~l~g~~----~~i~~ssGt~Ai~~al~~l-~~~Gd~Vi~~~~~y~~-~~~~~~~~l~~~G~~v 149 (415)
T 2fq6_A 76 YGRRGTLTHFSLQQAMCELEGGA----GCVLFPCGAAAVANSILAF-IEQGDHVLMTNTAYEP-SQDFCSKILSKLGVTT 149 (415)
T ss_dssp CTTTCCHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEETTSCHH-HHHHHHHTGGGGTCEE
T ss_pred ccCCCCchHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCCchH-HHHHHHHHHHHcCcEE
Confidence 33333466789999999999985 2455688899999999998 7899997754 56765 3434444557789999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh--CCcEEEEeccccCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE--NDWHILIDACALGPKDMDSF 319 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~g~~m~~l 319 (632)
+.++.+ |+++|+++|+++ ++||++.+.+|+||..+|++ |+++|++ +|+++++|+++..|....++
T Consensus 150 ~~v~~~------d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~ 217 (415)
T 2fq6_A 150 SWFDPL------IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL 217 (415)
T ss_dssp EEECTT------CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG
T ss_pred EEECCC------CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc
Confidence 998753 567888777653 59999999999999999999 9999999 99999999999866422344
Q ss_pred CCCCCCCcEEEEccccccCCCCCc---eEEEEEeCCCcccc
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSG---FGCLFVKKSTVPIL 357 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G---~G~L~Vr~~~~~~L 357 (632)
+ +++|++++|+||++| |.| .|+++.+++.++.+
T Consensus 218 ~---~g~Div~~S~sK~lg--~~g~~~~G~l~~~~~~~~~l 253 (415)
T 2fq6_A 218 D---FGIDVSIQAATKYLV--GHSDAMIGTAVCNARCWEQL 253 (415)
T ss_dssp G---GTCSEEEEETTTTTT--CSSSCCCEEEEECTTTHHHH
T ss_pred c---cCCeEEEEeCccccC--CCCCceEEEEEeCHHHHHHH
Confidence 3 588999999999999 555 69999887655433
No 62
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.90 E-value=4.3e-22 Score=222.11 Aligned_cols=309 Identities=12% Similarity=0.067 Sum_probs=223.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccE--EEeCCHHHHHHHHHhhCCCCCC--------CeEEEec-cccchhhHHHHHHHHh
Q 006746 169 SGLESAMKKRIMDFLNISENDYGM--VFTANRTSAFKLLAESYPFMSV--------KNLLTVY-DYESEAVEAMIRTSEK 237 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~v--vft~naT~al~lv~~sl~~~~g--------d~ilt~~-d~~s~~v~~~~~~a~~ 237 (632)
..+.+++++.+++++|++++...+ +||+|+|+|+.+++.++. .+| |+|++.. .|++ +...++.
T Consensus 138 ~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~-~~g~~~~g~~~d~Vi~~~~~~~~-----~~~~~~~ 211 (514)
T 3mad_A 138 AKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYR-DWARATKGITAPEAVVPVSAHAA-----FDKAAQY 211 (514)
T ss_dssp HHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHH-HHHHHHHCCSSCEEEEETTSCTH-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCccchH-----HHHHHHH
Confidence 466778889999999998521246 999999999999998872 333 7877654 5553 2345567
Q ss_pred cCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCC---
Q 006746 238 RGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGP--- 313 (632)
Q Consensus 238 ~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g--- 313 (632)
.|++++.++.+ +++.+|+++|+++|+++ +++|++++.+|.||...|++ |.++|+++|+++++|+++...
T Consensus 212 ~G~~v~~v~~~-~~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~ 284 (514)
T 3mad_A 212 FGIKLVRTPLD-ADYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILP 284 (514)
T ss_dssp HTCEEEEECBC-TTSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred cCCeeEEeeeC-CCCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccch
Confidence 79999999998 57889999999999754 58999999999999999999 999999999999999986643
Q ss_pred ------CCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCC
Q 006746 314 ------KDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETE 387 (632)
Q Consensus 314 ------~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e 387 (632)
....+++....++|++++|+||+++. |.|+|+++++++.+........ ..|....
T Consensus 285 ~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~-~~~~g~~~~~~~~~~~~~~~~~-----------~~~~~~~------- 345 (514)
T 3mad_A 285 WAERLGYPVPPFDFRLEGVTSVSADTHKYGYG-AKGTSVILYRRPDLLHYQYFIA-----------ADWPGGL------- 345 (514)
T ss_dssp HHHHTTCCCCCCSTTSTTCCEEEECTTTTTCC-CSSCEEEEESSHHHHTTTCEEE-----------SSCTTCS-------
T ss_pred hHHhcCCCCCcccccCCCCcEEEECchhccCC-CCCeEEEEEeCHHHhccccccc-----------cccCCCc-------
Confidence 21125677778999999999997443 8899999999876533221100 0110000
Q ss_pred ccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHH
Q 006746 388 PEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMIS 467 (632)
Q Consensus 388 ~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~ 467 (632)
+ .. .. ..|+.+...+.++. .+++.+...|++.+.
T Consensus 346 -------~---~~--~~----------~~gs~~~~~~~a~~------------------------aal~~l~~~~~~~~~ 379 (514)
T 3mad_A 346 -------Y---FS--PT----------FAGSRPGALSATAW------------------------AAMLSLGEEGYLDAT 379 (514)
T ss_dssp -------E---EE--SS----------SCSSCCHHHHHHHH------------------------HHHHHHHHHHHHHHH
T ss_pred -------c---cC--Cc----------cCCCCchHHHHHHH------------------------HHHHHHhHHHHHHHH
Confidence 0 00 00 01222223333343 678877777899999
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChH
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~ 547 (632)
++.+.+.+++.+.|.++ |.++++++. .+++.|...+ ++...+.+.+.++||.+ .|.
T Consensus 380 ~~~~~~~~~l~~~L~~~--------~g~~~~~~~-----~~~~~~~~~~-----~~~~~l~~~L~~~Gi~v-~g~----- 435 (514)
T 3mad_A 380 RRILQAADRLKAGVRAI--------PSLKILGDP-----LWVIAVASDE-----LNIYQVMEEMAGRGWRL-NGL----- 435 (514)
T ss_dssp HHHHHHHHHHHHHHHTS--------TTCEESSCC-----SSEEEEECSS-----SCHHHHHHHHHTTTCBC-EEE-----
T ss_pred HHHHHHHHHHHHHHhhC--------CCeEEeCCC-----eEEEEEeCCC-----CCHHHHHHHHHhcCCEe-ccC-----
Confidence 99999999999999987 567887663 4488887644 56667776666779876 221
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccC-CCCCHHHHHHHHHHHHHhhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLG-YLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg-~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....+|+++. +.++.+||+++++.|++.++.
T Consensus 436 ---------------------------------~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 436 ---------------------------------HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp ---------------------------------TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 01247999998 445679999999999998764
No 63
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.90 E-value=5.1e-23 Score=221.81 Aligned_cols=202 Identities=10% Similarity=0.042 Sum_probs=152.0
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE 187 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~ 187 (632)
...+.|+.+....-..+.+++..+. |..+.+.|+.......++.|+++++++|++
T Consensus 26 ~~~~~d~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~la~~~g~~- 80 (398)
T 2rfv_A 26 ALSTPIFQTSTFVFDSAEQGAARFA------------------------LEESGYIYTRLGNPTTDALEKKLAVLERGE- 80 (398)
T ss_dssp CSSCCCCCCSBCCCSSHHHHHHHC-----------------------------CCSBTTTCCHHHHHHHHHHHHHHTCS-
T ss_pred CcCCCCcCCCccccCCHHHHHHhhc------------------------CCCCCCceeCCCChHHHHHHHHHHHHhCCC-
Confidence 4678999999888877777755211 111222233323467789999999999985
Q ss_pred CCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhc
Q 006746 188 NDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 266 (632)
Q Consensus 188 ~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~ 266 (632)
.++++.++|+|+.+++.++ +++||+|++. ..|++ ....+...++..|++++.++.+ ++++|+++|+++
T Consensus 81 ---~~i~~~sG~~a~~~~l~~~-~~~gd~vi~~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~ 149 (398)
T 2rfv_A 81 ---AGLATASGISAITTTLLTL-CQQGDHIVSASAIYGC-THAFLSHSMPKFGINVRFVDAA------KPEEIRAAMRPE 149 (398)
T ss_dssp ---EEEEESSHHHHHHHHHHHH-CCTTCEEEEESSSCHH-HHHHHHTHHHHTTCEEEEECTT------SHHHHHHHCCTT
T ss_pred ---cEEEECCHHHHHHHHHHHH-hCCCCEEEEcCCCccc-HHHHHHHHHHHcCCEEEEeCCC------CHHHHHHhcCCC
Confidence 3566667889999999988 6889997754 56664 3433344457789999988763 788998888653
Q ss_pred CcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccccCCCCCc--
Q 006746 267 GKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG-- 343 (632)
Q Consensus 267 ~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G-- 343 (632)
+++|++++.+|+||..+|++ |.++|+++|+++++|.++..+..-.++ .+++|+++.|+||++|. |.+
T Consensus 150 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~---~~~~di~~~s~sK~~~~-~g~~~ 219 (398)
T 2rfv_A 150 ------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL---QLGADIVVHSVTKYING-HGDVI 219 (398)
T ss_dssp ------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG---GGTCSEEEEETTTTTTC-SSCCC
T ss_pred ------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch---hhCCcEEEEeCcccccC-CCCce
Confidence 58999999999999999999 999999999999999999876521232 35789999999998875 655
Q ss_pred eEEEEEeCCCcc
Q 006746 344 FGCLFVKKSTVP 355 (632)
Q Consensus 344 ~G~L~Vr~~~~~ 355 (632)
.|+++++++.++
T Consensus 220 ~G~~~~~~~~~~ 231 (398)
T 2rfv_A 220 GGIIVGKQEFID 231 (398)
T ss_dssp CEEEEECHHHHH
T ss_pred EEEEEECHHHHH
Confidence 599998876653
No 64
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.90 E-value=4.5e-22 Score=220.37 Aligned_cols=324 Identities=11% Similarity=0.012 Sum_probs=213.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCC-------ccEEEeCCHHHHHHHHHhhCCC------------------CCCCeEEEe-c
Q 006746 168 ESGLESAMKKRIMDFLNISEND-------YGMVFTANRTSAFKLLAESYPF------------------MSVKNLLTV-Y 221 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~e-------y~vvft~naT~al~lv~~sl~~------------------~~gd~ilt~-~ 221 (632)
..++.+++.+.+++++|.+++. ...+||+|+|+|+.+.+..... .+++.|+++ .
T Consensus 111 ~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~ 190 (475)
T 3k40_A 111 CTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQ 190 (475)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETT
T ss_pred HHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCC
Confidence 3578888999999999997531 2589999999997665444310 123456655 4
Q ss_pred cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC
Q 006746 222 DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN 300 (632)
Q Consensus 222 d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~ 300 (632)
.|++ + .+.++..|++++.+|.+ +++ +++++|+++|+++++....+.++++++.++.||...|++ |+++|+++
T Consensus 191 ~H~s--~---~~~~~~~g~~~~~v~~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~ 263 (475)
T 3k40_A 191 AHSS--V---ERAGLLGGVKLRSVQSE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKH 263 (475)
T ss_dssp SCHH--H---HHHHHHHTCEEEEECCB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT
T ss_pred chHH--H---HHHHHHcCCceEEEECC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHh
Confidence 5554 2 33455679999999998 677 999999999987542233467899999999999999999 99999999
Q ss_pred CcEEEEeccccCCCCCC-CCC--CCC-CCCcEEEEccccccCCCCCceEEEEEeCCCc-c-cc--CCCCCCCceeecccc
Q 006746 301 DWHILIDACALGPKDMD-SFG--LSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTV-P-IL--VDNTSSGMVSLLPAK 372 (632)
Q Consensus 301 g~~vlvDaaq~~g~~m~-~ld--ls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~-~-~L--~~~~~gG~v~~~~~~ 372 (632)
|++++||+|+.++.-.. ... +.. ..+|++++++||+++. |.|+|++++++... . .+ .+.+..+...
T Consensus 264 ~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~-p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~----- 337 (475)
T 3k40_A 264 NLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLV-NFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQ----- 337 (475)
T ss_dssp TCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESSGGGC---------------------
T ss_pred CCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCC-CCceEEEEEeCHHHHHHHhcCCccccCCCcC-----
Confidence 99999999987653100 110 111 2569999999997775 99999999998643 1 11 1111110000
Q ss_pred cccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhh
Q 006746 373 KQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIEC 452 (632)
Q Consensus 373 ~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (632)
...+ +.. ...+ +.+. +| ...++-
T Consensus 338 ~~~~--------~~~----~~~~---~~sr-~~-----------------~~l~l~------------------------ 360 (475)
T 3k40_A 338 GSAP--------DYR----HWQI---PLGR-RF-----------------RALKLW------------------------ 360 (475)
T ss_dssp --------------------------CCCG-GG-----------------THHHHH------------------------
T ss_pred CCCC--------Ccc----cccc---cCCC-cc-----------------cHHHHH------------------------
Confidence 0000 000 0000 0000 01 112222
Q ss_pred hHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHH
Q 006746 453 RGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLAD 532 (632)
Q Consensus 453 ~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~ 532 (632)
.+|..+...|++.+.+|...+++++.+.|.++ |.+++++|. ..++|+|.+.+.+ ....++.+++.+
T Consensus 361 ~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--------~g~~l~~~~----~~~iv~f~~~~~~--~~~~~l~~~L~~ 426 (475)
T 3k40_A 361 FVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD--------SRFELAAEI----NMGLVCFRLKGSN--ERNEALLKRING 426 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------TTEEESSCC----BTTEEEEEESSCH--HHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEecCC----ceEEEEEEeCCch--HHHHHHHHHHHh
Confidence 66777777789999999999999999999997 779998763 5789999987521 122334444544
Q ss_pred hCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccC-CCCCHHHHHHHHHHHHHhhh
Q 006746 533 RENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLG-YLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 533 ~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg-~~~t~eDV~rlv~~l~~~l~ 611 (632)
+..+.+..+ ...+...+|+++. +.+|.+||+++++.|+++++
T Consensus 427 ~g~~~~~~~-------------------------------------~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 469 (475)
T 3k40_A 427 RGHIHLVPA-------------------------------------KIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAAD 469 (475)
T ss_dssp HTSCBCEEE-------------------------------------EETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEee-------------------------------------EECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 433322211 0113469999964 67799999999999999875
Q ss_pred h
Q 006746 612 A 612 (632)
Q Consensus 612 ~ 612 (632)
.
T Consensus 470 ~ 470 (475)
T 3k40_A 470 E 470 (475)
T ss_dssp H
T ss_pred H
Confidence 4
No 65
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.90 E-value=1.2e-21 Score=210.17 Aligned_cols=172 Identities=15% Similarity=0.139 Sum_probs=136.5
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+........+.|++|+++++++ ..|+|+ |+|+|+.+++.++ +++||+|++. ..|++ ....+...++..|+++
T Consensus 46 ~~~~~~~~~~~l~~~la~~~~~~---~~i~~~-sGt~a~~~~~~~~-~~~g~~vl~~~~~~~~-~~~~~~~~~~~~g~~~ 119 (386)
T 1cs1_A 46 YSRRGNPTRDVVQRALAELEGGA---GAVLTN-TGMSAIHLVTTVF-LKPGDLLVAPHDCYGG-SYRLFDSLAKRGCYRV 119 (386)
T ss_dssp BTTTCCHHHHHHHHHHHHHHTCS---EEEEES-SHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HHHHHHHHHTTTSCEE
T ss_pred eeCCCCccHHHHHHHHHHHhCCC---cEEEeC-CHHHHHHHHHHHH-hCCCCEEEEecCCcHh-HHHHHHHHHHhcCCEE
Confidence 44434567789999999999986 256665 5599999999998 7889997654 56665 4555555667889999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
..++.+ |.++|+++|+++ +++|++++.+|+||...|++ |.++|+++|+++++|.++..+.. ...+
T Consensus 120 ~~~~~~------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~--~~~~ 185 (386)
T 1cs1_A 120 LFVDQG------DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPAL--QNPL 185 (386)
T ss_dssp EEECTT------CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT--CCGG
T ss_pred EEeCCC------CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc--CCcc
Confidence 988763 789999999864 48999999999999999999 99999999999999999988752 2223
Q ss_pred CCCCCcEEEEccccccCCCCCce--EEEEEeC-CCcccc
Q 006746 322 SLVRPDFLICSFYQIFGENPSGF--GCLFVKK-STVPIL 357 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G~--G~L~Vr~-~~~~~L 357 (632)
.+++|+++.|+||++|. |.+. |++++++ +.++.+
T Consensus 186 -~~~~di~~~s~sK~~~~-~~~~~~G~~~~~~~~l~~~l 222 (386)
T 1cs1_A 186 -ALGADLVLHSCTKYLNG-HSDVVAGVVIAKDPDVVTEL 222 (386)
T ss_dssp -GGTCSEEEEETTTTTTC-SSCCCCEEEEESSHHHHHHH
T ss_pred -ccCceEEEEcCcccccC-CCCceeEEEEeCcHHHHHHH
Confidence 36899999999998875 6664 9999987 554444
No 66
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=7.6e-24 Score=228.83 Aligned_cols=168 Identities=11% Similarity=0.114 Sum_probs=131.3
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCE
Q 006746 163 LHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 163 ~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~ 241 (632)
.|+......++++|++|++++|++ ..|+| .|+|+|+++++. + +++||+|++. ..|++ ...++...++..|++
T Consensus 48 ~~~~~~~~~~~~lr~~la~~~g~~---~~i~~-~sGt~a~~~al~-~-~~~gd~Vi~~~~~y~~-~~~~~~~~~~~~G~~ 120 (393)
T 1n8p_A 48 EYSRSQNPNRENLERAVAALENAQ---YGLAF-SSGSATTATILQ-S-LPQGSHAVSIGDVYGG-THRYFTKVANAHGVE 120 (393)
T ss_dssp CBTTTCCHHHHHHHHHHHHHTTCS---EEEEE-SCHHHHHHHHHH-T-SCSSCEEEEESSCCHH-HHHHHHHTSTTTCSC
T ss_pred ceecCCChhHHHHHHHHHHHhCCC---cEEEE-CChHHHHHHHHH-H-cCCCCEEEEeCCCchH-HHHHHHHHHHHcCcE
Confidence 355545577889999999999986 24555 556999999999 6 6899997755 45554 454544456778999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC----CcEEEEeccccCCCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN----DWHILIDACALGPKDM 316 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~----g~~vlvDaaq~~g~~m 316 (632)
++.++.+ | ++|+++|+++ +++|++++.+|+||..+|++ |.++|+++ |+++++|++|..+..
T Consensus 121 v~~v~~~------d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~- 186 (393)
T 1n8p_A 121 TSFTNDL------L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYI- 186 (393)
T ss_dssp CEEESSH------H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHH-
T ss_pred EEEeCCC------h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCcccccc-
Confidence 9998764 5 7888877643 59999999999999999999 99999999 999999999987651
Q ss_pred CCCCCCCCCCcEEEEccccccCCCCCc--e-EEEEEe-CCCcc
Q 006746 317 DSFGLSLVRPDFLICSFYQIFGENPSG--F-GCLFVK-KSTVP 355 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK~~G~~P~G--~-G~L~Vr-~~~~~ 355 (632)
.+...+++|+++.|+||++| |.| + |+++++ ++.++
T Consensus 187 --~~~~~~~~di~~~S~sK~~g--~~G~rigG~~~~~~~~~~~ 225 (393)
T 1n8p_A 187 --SNPLNFGADIVVHSATKYIN--GHSDVVLGVLATNNKPLYE 225 (393)
T ss_dssp --CCGGGGTCSEEEEETTTTTT--CSSCCCCEEEEESCHHHHH
T ss_pred --CCHHHcCCeEEEEECccccc--CCCCceeEEEEeCCHHHHH
Confidence 13334589999999999999 778 7 888876 34443
No 67
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.90 E-value=1.1e-21 Score=207.92 Aligned_cols=287 Identities=9% Similarity=0.065 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHcCC-CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 172 ESAMKKRIMDFLNI-SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 172 ~~~~R~~ia~~l~a-~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
..+.|+++++++|+ +++ .|+||+|+|+|+++++.++ +++||+|++ ...|++ .. ..++..|++++.++++
T Consensus 69 ~~~l~~~la~~~g~~~~~--~i~~~~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~~----~~~~~~g~~~~~v~~~- 139 (367)
T 3euc_A 69 SEALRAKLKEVMQVPAGM--EVLLGNGSDEIISMLALAA-ARPGAKVMAPVPGFVM-YA----MSAQFAGLEFVGVPLR- 139 (367)
T ss_dssp HHHHHHHHHHHHTCCTTC--EEEEEEHHHHHHHHHHHHT-CCTTCEEEEEESCSCC-SC----HHHHTTTCEEEEEECC-
T ss_pred HHHHHHHHHHHhCCCCcc--eEEEcCCHHHHHHHHHHHH-cCCCCEEEEcCCCHHH-HH----HHHHHcCCeEEEecCC-
Confidence 35899999999999 443 7999999999999999999 789999765 446654 22 2356789999999998
Q ss_pred CccccCHHHHHHHHHh-cCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhC--CcEEEEeccccCC--CCCCCCC
Q 006746 250 PRLRINSEKLRKMVVS-KGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQEN--DWHILIDACALGP--KDMDSFG 320 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~-~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~--g~~vlvDaaq~~g--~~m~~ld 320 (632)
+++.+|+++|++++++ + ++++++++.+|+||..+|. + |+++|+++ |+++++|.++..- .. ..-.
T Consensus 140 ~~~~~d~~~l~~~l~~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~-~~~~ 212 (367)
T 3euc_A 140 ADFTLDRGAMLAAMAEHQ------PAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES-WMSR 212 (367)
T ss_dssp TTSCCCHHHHHHHHHHHC------CSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC-SGGG
T ss_pred CCCCCCHHHHHHHhhccC------CCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc-hHHH
Confidence 5778999999999987 4 4899999999999999864 4 56778999 9999999987631 11 0112
Q ss_pred CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
+...+.++++.|++|. |.+..++|+++++++.++.+..... .|
T Consensus 213 ~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~------------~~------------------------ 255 (367)
T 3euc_A 213 LTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRP------------PY------------------------ 255 (367)
T ss_dssp GGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHGGGCC------------SS------------------------
T ss_pred HhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHHHhCC------------CC------------------------
Confidence 3345667999999998 7433457888887666544432110 00
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~ 480 (632)
+.+.+...++. .+|+. ...++.+.++.+.+.++|.+.
T Consensus 256 -----------------~~~~~~~~a~~------------------------~~l~~--~~~~~~~~~~~~~~~~~l~~~ 292 (367)
T 3euc_A 256 -----------------NVNVLTEATAL------------------------FALEH--VAVLDEQAAQLRAERSRVAEG 292 (367)
T ss_dssp -----------------CCCHHHHHHHH------------------------HHHTT--HHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------CCCHHHHHHHH------------------------HHhcC--HHHHHHHHHHHHHHHHHHHHH
Confidence 00111112221 44444 123678889999999999999
Q ss_pred HHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
|.++ |.++++.+ .+..+.+.+. +...+.+.+.++||.++.|..|..
T Consensus 293 l~~~--------~g~~~~~~-----~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~-------------- 338 (367)
T 3euc_A 293 MAAH--------GGVTVFPS-----AANFLLARVP-------DAAQTFDRLLARKVLIKNVSKMHP-------------- 338 (367)
T ss_dssp HHTS--------TTCEECCC-----SSSEEEEECS-------CHHHHHHHHHTTTEECEECGGGCG--------------
T ss_pred HHhC--------CCcEECCC-----CCeEEEEECC-------CHHHHHHHHHHCCeEEEECCccCC--------------
Confidence 9886 55665432 4566666654 455666667788999998755431
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+.||+|++ |.+|++++++.|+++++
T Consensus 339 --------------------~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 339 --------------------LLANCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp --------------------GGTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred --------------------CCCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 12469999977 99999999999998864
No 68
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.90 E-value=5.8e-22 Score=211.76 Aligned_cols=342 Identities=12% Similarity=0.076 Sum_probs=228.3
Q ss_pred CceEeecCCCCCC----CHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc
Q 006746 108 NHTCLDYFGIGLF----SYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL 183 (632)
Q Consensus 108 ~~vyLD~ag~gl~----~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l 183 (632)
+.-|+|.++..++ ++.+.+++.+.+..... ....+...+| ..+..++.|+.+++++
T Consensus 42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~------------------~~~~~~~~~g--~~~~~~~l~~~la~~~ 101 (399)
T 3tqx_A 42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQYGF------------------GMASVRFICG--TQTIHKELEKDISEFL 101 (399)
T ss_dssp TEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCS------------------CCCSCCCCCC--CBHHHHHHHHHHHHHH
T ss_pred CeeEEEeeccCcccccCCHHHHHHHHHHHHHhCC------------------CCCCcCcccc--CchHHHHHHHHHHHHH
Confidence 4568898887643 46777776543321100 1111122222 2366789999999999
Q ss_pred CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHH
Q 006746 184 NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 184 ~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
|++ ..+++.|+|+|+.+++.++ +++||+|++..-.|. .+...++..|++++.++. +++++|++++
T Consensus 102 ~~~----~~i~~~sGt~a~~~~l~~~-~~~gd~v~~~~~~~~----~~~~~~~~~g~~~~~~~~------~d~~~l~~~l 166 (399)
T 3tqx_A 102 GTD----DTILYSSCFDANGGLFETL-LGPEDAIISDELNHA----SIIDGIRLCKAQRYRYKN------NAMGDLEAKL 166 (399)
T ss_dssp TCS----EEEEESCHHHHHHTTHHHH-CCTTCEEEEETTCCH----HHHHHHHSCCSEEEEECT------TCTTHHHHHH
T ss_pred CCC----cEEEECchHHHHHHHHHHh-cCCCCEEEECCcccH----HHHHHHHHcCCceeEeCC------CCHHHHHHHH
Confidence 985 2444556788999988888 789999876653333 123345678999988875 3567888888
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC-----CCCCC--CCCcEEEEcccc
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS-----FGLSL--VRPDFLICSFYQ 335 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~-----ldls~--~~~Df~~~S~hK 335 (632)
++......+++++++++.+|+||..+|++ |.++|+++|+++++|.++..+.. .. ++... .++|+++.|+||
T Consensus 167 ~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~di~~~s~sK 245 (399)
T 3tqx_A 167 KEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFI-GENGRGTPEYCGVADRVDILTGTLGK 245 (399)
T ss_dssp HHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTS-STTSCCHHHHHTCTTCCSEEEEESSS
T ss_pred HhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCchHHhhCCCCCCcEEEecchH
Confidence 76321112469999999999999999999 99999999999999999865431 11 11111 267999999999
Q ss_pred ccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhh
Q 006746 336 IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQ 415 (632)
Q Consensus 336 ~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~ 415 (632)
++|. |.| |+++.+++.++.+.... . .|. .
T Consensus 246 ~~~g-~~g-G~~~~~~~~~~~~~~~~-----------~-~~~---------------------~---------------- 274 (399)
T 3tqx_A 246 ALGG-ASG-GYTSGHKEIIEWLRNRS-----------R-PYL---------------------F---------------- 274 (399)
T ss_dssp SSCS-SCC-EEEEECHHHHHHHHHHC-----------H-HHH---------------------S----------------
T ss_pred hccc-Cce-EEEEcCHHHHHHHHHhC-----------c-cee---------------------c----------------
Confidence 8873 667 99998887655443210 0 000 0
Q ss_pred cCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE
Q 006746 416 SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV 495 (632)
Q Consensus 416 ~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v 495 (632)
.++.+...+.++. .+++... .+++.+.++.+.+.+++.+.|.++ |.+
T Consensus 275 ~~~~~~~~~~~~~------------------------~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~------g~~-- 321 (399)
T 3tqx_A 275 SNTVAPVIVATSL------------------------KVLELLK-TEGPQLRKQLQENSRYFRAGMEKL------GFQ-- 321 (399)
T ss_dssp SCCCCHHHHHHHH------------------------HHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH------TCC--
T ss_pred cCCCcHHHHHHHH------------------------HHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc------CCC--
Confidence 0111222222232 5666664 468999999999999999999988 433
Q ss_pred EEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccc
Q 006746 496 KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNR 575 (632)
Q Consensus 496 ~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 575 (632)
++. ..++++.+.+.+. .+...+.+.+.++||.++.+.+..
T Consensus 322 -~~~-----~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~~~~~~------------------------------ 361 (399)
T 3tqx_A 322 -LVP-----GNHPIIPVMLGDA----QLATNMADHLLQEGIYVVGFSYPV------------------------------ 361 (399)
T ss_dssp -BCC-----CSSSEEEEEEECH----HHHHHHHHHHHHTTEECCEECTTT------------------------------
T ss_pred -cCC-----CCCCEEEEEeCCH----HHHHHHHHHHHHCCCEEeeeCCCC------------------------------
Confidence 222 3577888877641 234455555555799998543211
Q ss_pred cccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 576 KDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 576 ~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.+.||+|+++++|.+||+++++.|+++++.
T Consensus 362 ---~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 362 ---VPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp ---SCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 0123469999999999999999999999998764
No 69
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.90 E-value=1.4e-21 Score=208.34 Aligned_cols=307 Identities=13% Similarity=0.054 Sum_probs=210.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.++.+++++.+++.+|.+.+...|+||+|+|+|+.+++.++ +++||+|++.. .|++ ....++..|++++.++.
T Consensus 65 ~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~-----~~~~~~~~g~~~~~~~~ 138 (391)
T 3dzz_A 65 AEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQF-TSPGDQILVQEPVYNM-----FYSVIEGNGRRVISSDL 138 (391)
T ss_dssp HHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCHH-----HHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHh-CCCCCeEEECCCCcHH-----HHHHHHHcCCEEEEeee
Confidence 46677888888888884322338999999999999999998 78999987654 5553 23456778999999988
Q ss_pred cC--CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc---chH-HHHHHhhCCcEEEEeccccCCCC--CCCC
Q 006746 248 SW--PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY---PYL-WMRIAQENDWHILIDACALGPKD--MDSF 319 (632)
Q Consensus 248 ~~--~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~---pl~-i~~~a~~~g~~vlvDaaq~~g~~--m~~l 319 (632)
++ .+..+++++|+++|++. +++++++++.+|+||..+ +++ |+++|+++|+++++|.++..... ....
T Consensus 139 ~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 213 (391)
T 3dzz_A 139 IYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDIT 213 (391)
T ss_dssp EEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCC
T ss_pred eecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCce
Confidence 52 33348999999999731 368999999999999995 566 78889999999999999874210 0123
Q ss_pred CCCCCC---Cc--EEEEccccccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 320 GLSLVR---PD--FLICSFYQIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 320 dls~~~---~D--f~~~S~hK~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
.+..+. +| +++.|+||.+|.+..++|+++++ ++.++.+.....
T Consensus 214 ~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~------------------------------- 262 (391)
T 3dzz_A 214 PAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFF------------------------------- 262 (391)
T ss_dssp CGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHH-------------------------------
T ss_pred ehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHH-------------------------------
Confidence 333333 67 99999999888423358998887 544433321100
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
..+ ..+++.+...++. .+|+... ..++.+.++.+.+
T Consensus 263 -----~~~--------------~~~~~~~~~~a~~------------------------~~l~~~~-~~~~~~~~~~~~~ 298 (391)
T 3dzz_A 263 -----LAG--------------IGEPNLLAIPAAI------------------------AAYEEGH-DWLRELKQVLRDN 298 (391)
T ss_dssp -----HHT--------------CSSCCTTHHHHHH------------------------HHHHHCH-HHHHHHHHHHHHH
T ss_pred -----hhc--------------cCCCCHHHHHHHH------------------------HHHhccH-HHHHHHHHHHHHH
Confidence 000 0011222222222 4554422 2368888999999
Q ss_pred HHHHHHHHHc-cCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHH-HhCCcEEccCccCChHHHhH
Q 006746 474 INWLVNALMK-LQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLA-DRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 474 ~~~L~~~L~~-l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla-~~~gI~lr~G~~c~~~~~~~ 551 (632)
.+++.+.|.+ + |.++++.|. .+..+.+.+... | ++...+.+.+ +++||.++.|..|..
T Consensus 299 ~~~l~~~l~~~~--------~~~~~~~~~----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~----- 358 (391)
T 3dzz_A 299 FAYAREFLAKEV--------PEVKVLDSN----ASYLAWVDISAL-G--MNAEDFCKYLREKTGLIISAGNGYRG----- 358 (391)
T ss_dssp HHHHHHHHHHHC--------TTSEECCCC----BSSEEEEECGGG-C--SCHHHHHHHHHHHHCEECEESGGGCT-----
T ss_pred HHHHHHHHHhhC--------CCcEEeccC----ceEEEEEehhhc-C--CCHHHHHHHHHHhCCEEEeCchhhCC-----
Confidence 9999999998 5 567777653 233444555531 1 4556665544 688999998855442
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||+|++ ++.+||+++++.|+++++.
T Consensus 359 -----------------------------~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 359 -----------------------------NGHEFVRINLA--CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp -----------------------------TGGGEEEEECC--SCHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------CCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 12469999999 7999999999999998753
No 70
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.89 E-value=1.1e-21 Score=210.36 Aligned_cols=298 Identities=11% Similarity=0.106 Sum_probs=209.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
.+..+++++.+++++|++ .++||+|+|+|+.+++.++ .++||+|++..-.|. .+ ...++..|++++.++.
T Consensus 87 ~~~~~~l~~~la~~~g~~----~v~~~~ggt~a~~~~~~~~-~~~gd~V~~~~p~~~-~~---~~~~~~~g~~~~~v~~- 156 (398)
T 3a2b_A 87 LDIHVELEEKLSAYVGKE----AAILFSTGFQSNLGPLSCL-MGRNDYILLDERDHA-SI---IDGSRLSFSKVIKYGH- 156 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHS-SCTTCEEEEETTCCH-HH---HHHHHHSSSEEEEECT-
T ss_pred cHHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEECCccCH-HH---HHHHHHcCCceEEeCC-
Confidence 367789999999999973 6999999999999999999 789999876653333 12 3345678999988875
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC-CCCCCCC-CCC-
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK-DMDSFGL-SLV- 324 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~-~m~~ldl-s~~- 324 (632)
+|.++|++++++.. ..+++++++++.+|+||...|++ |.++|+++|+++++|.++..+. +-...++ +.+
T Consensus 157 -----~d~~~l~~~l~~~~--~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 229 (398)
T 3a2b_A 157 -----NNMEDLRAKLSRLP--EDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFG 229 (398)
T ss_dssp -----TCHHHHHHHHHTSC--SSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHT
T ss_pred -----CCHHHHHHHHHhhc--cCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcC
Confidence 57899999998632 11468999999999999999999 9999999999999999987542 1001222 111
Q ss_pred ---CCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 325 ---RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 325 ---~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
++|+++.|++|++| |.| |+++++++.++.+..... .|. ..+
T Consensus 230 ~~~~~di~~~s~sK~~~--~~G-G~~~~~~~~~~~l~~~~~------------~~~---------------------~~~ 273 (398)
T 3a2b_A 230 LNDDVDLIMGTFSKSLA--SLG-GFVAGDADVIDFLKHNAR------------SVM---------------------FSA 273 (398)
T ss_dssp CGGGCSEEEEESSSTTC--SSC-EEEEECHHHHHHHHHHCH------------HHH---------------------SSB
T ss_pred CCcCCeEEEeccccccc--CCC-cEEEeCHHHHHHHHHhcc------------cce---------------------ecC
Confidence 47999999999999 778 999998776554432100 000 000
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
+ ++.....++. .+|+..+. ++.+.++.+.+.+++.+.|
T Consensus 274 ~----------------~~~~~~a~~~------------------------~~l~~~~~--~~~~~~~~~~~~~~l~~~L 311 (398)
T 3a2b_A 274 S----------------MTPASVASTL------------------------KALEIIQN--EPEHIEKLWKNTDYAKAQL 311 (398)
T ss_dssp C----------------CCHHHHHHHH------------------------HHHHHHHH--CTHHHHHHHHHHHHHHHHH
T ss_pred C----------------CCHHHHHHHH------------------------HHHHHHhh--CHHHHHHHHHHHHHHHHHH
Confidence 0 0111111111 56665432 4677888999999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 561 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~ 561 (632)
.++ |.+ ++.| .+.++.+.+.+ + ++...+.+.+.++||.++.|..|..
T Consensus 312 ~~~------g~~---~~~~-----~g~~~~~~~~~--~--~~~~~l~~~l~~~gi~v~~~~~~~~--------------- 358 (398)
T 3a2b_A 312 LDH------GFD---LGAT-----ESPILPIFIRS--N--EKTFWVTKMLQDDGVFVNPVVSPAV--------------- 358 (398)
T ss_dssp HHT------TCC---BCSC-----CSSEEEEECCC--H--HHHHHHHHHHHHTTEECEEECTTTS---------------
T ss_pred Hhc------CCC---cCCC-----CCCEEEEEcCC--H--HHHHHHHHHHHHCCcEEEeeCCCCC---------------
Confidence 987 433 3333 36777777643 1 3344555444455999987754431
Q ss_pred hhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 562 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.+.||+|++.+++.+|++++++.|+++++.
T Consensus 359 ------------------~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 359 ------------------PAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp ------------------CGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 012468999999999999999999999998753
No 71
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.89 E-value=1.6e-22 Score=217.20 Aligned_cols=360 Identities=11% Similarity=0.075 Sum_probs=231.0
Q ss_pred CCCCCCchhHHHHHHhhccCcCC-----CCceEeecC---CCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCcccccccc
Q 006746 84 YPQYFDTYQIDQIRAKEYYQLSL-----SNHTCLDYF---GIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYK 154 (632)
Q Consensus 84 ~p~y~~~~~~d~iR~~ef~~L~~-----~~~vyLD~a---g~gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~ 154 (632)
...|.....++.+|+ +||.+.. ++.-|+||. ..++ .++.+++++.+.+....
T Consensus 17 ~~~~~~~~~~~~~~~-~fp~~~~~~~~~~g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~------------------ 77 (401)
T 2bwn_A 17 EGRYRTFIDIEREKG-AFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVG------------------ 77 (401)
T ss_dssp TTCCCCCCEEEECTT-STTEEEEECTTSCEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHC------------------
T ss_pred cCCceehhhhhcccc-cccceecccccCCCCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcC------------------
Confidence 334554445566776 6998841 123344444 3332 34568888765443210
Q ss_pred cccccc-ccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCCCCeEEEec-cccchhhHHH
Q 006746 155 TGNLKT-QLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY-PFMSVKNLLTVY-DYESEAVEAM 231 (632)
Q Consensus 155 ~~n~~s-~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~gd~ilt~~-d~~s~~v~~~ 231 (632)
.|++. ...|+ ..+.+++.|++|++++|++ ..|+||+|++ ++..+...+ .+.+||+|++.. .|++ ..
T Consensus 78 -~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~---~~i~~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~-~~--- 146 (401)
T 2bwn_A 78 -AGSGGTRNISG--TTAYHRRLEAEIAGLHQKE---AALVFSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHAS-MI--- 146 (401)
T ss_dssp -SCCCSBTTTBC--CBHHHHHHHHHHHHHTTCS---EEEEESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHH-HH---
T ss_pred -CCCCCcCcccC--ChHHHHHHHHHHHHHhCCC---cEEEECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHH-HH---
Confidence 11111 11122 2356789999999999974 3688877766 555554443 235799977654 6654 22
Q ss_pred HHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccc
Q 006746 232 IRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACA 310 (632)
Q Consensus 232 ~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq 310 (632)
..++..|++++.++.+ +.+++++++.... ..++++|++++.+|+||..+|++ |.++|+++|+++++|.++
T Consensus 147 -~~~~~~g~~~~~v~~~------d~~~le~~l~~~~--~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~ 217 (401)
T 2bwn_A 147 -EGIKRNAGPKRIFRHN------DVAHLRELIAADD--PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVH 217 (401)
T ss_dssp -HHHHHSCCCEEEECTT------CHHHHHHHHHHSC--TTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred -HHHHHcCCeEEEEcCC------CHHHHHHHHHhhc--cCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccc
Confidence 2345689999988864 6788988887421 12468999999999999999999 999999999999999999
Q ss_pred cCCCCCCC--------CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccC
Q 006746 311 LGPKDMDS--------FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 311 ~~g~~m~~--------ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
..|. ..+ .++. .++|+++.|+.|.||. .| |+++.+++.++.+... ...|
T Consensus 218 ~~g~-~~~~g~~~~~~~~~~-~~~~i~~~s~sK~~~~--~G-G~~~~~~~~~~~l~~~------------~~~~------ 274 (401)
T 2bwn_A 218 AVGM-YGPRGAGVAERDGLM-HRIDIFNGTLAKAYGV--FG-GYIAASARMVDAVRSY------------APGF------ 274 (401)
T ss_dssp TTTT-SSTTSCCHHHHHTCG-GGCSEEEEESSSTTCS--CC-EEEEECHHHHHHHHHH------------CHHH------
T ss_pred cccc-cCCCCceeeeccCcc-ccCcEEEeechhhccC--CC-CEEecCHHHHHHHHHh------------CcCc------
Confidence 8542 011 1110 1469999999999994 36 8777765443322110 0000
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
. +..+ +++ ..+.++. ++|+++...|
T Consensus 275 -----------~---~~~~----------------~~~-~~~~a~~------------------------~al~~~~~~~ 299 (401)
T 2bwn_A 275 -----------I---FSTS----------------LPP-AIAAGAQ------------------------ASIAFLKTAE 299 (401)
T ss_dssp -----------H---TSBC----------------CCH-HHHHHHH------------------------HHHHHHTSHH
T ss_pred -----------e---ecCC----------------CCH-HHHHHHH------------------------HHHHHHHhcc
Confidence 0 0111 111 2223333 7888887778
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccC
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYG 541 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G 541 (632)
++.+.++.+.+.+++.+.|.++ |. ++++| +++++.|.+.+ + ++...+.+ |++++||.++.|
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~------g~---~~~~~-----~~~~~~~~~~~--~--~~~~~~~~~L~~~~gi~v~~~ 361 (401)
T 2bwn_A 300 GQKLRDAQQMHAKVLKMRLKAL------GM---PIIDH-----GSHIVPVVIGD--P--VHTKAVSDMLLSDYGVYVQPI 361 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH------TC---CBCCC-----SSSCEEEECCC--H--HHHHHHHHHHHHHHCEECCEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHC------CC---cccCC-----CCCeEEEEeCC--h--HHHHHHHHHHHhcCCEEEeec
Confidence 8999999999999999999987 32 34443 35688888753 1 34455554 446789998754
Q ss_pred ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 542 SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 542 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.. ++ ...+.+.||+|++.++|.+||+++++.|+++++
T Consensus 362 ~~--~~-------------------------------~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~ 398 (401)
T 2bwn_A 362 NF--PT-------------------------------VPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWA 398 (401)
T ss_dssp CT--TT-------------------------------SCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC-
T ss_pred CC--CC-------------------------------CCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Confidence 21 00 011235899999999999999999999998864
No 72
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.89 E-value=2e-21 Score=215.04 Aligned_cols=324 Identities=11% Similarity=0.032 Sum_probs=214.7
Q ss_pred hhHHHHHHHHHHHHHcCCCCC-------CccEEEeCCHHHHHHHHHhhCCC--CC------CC--------e--EEEe-c
Q 006746 168 ESGLESAMKKRIMDFLNISEN-------DYGMVFTANRTSAFKLLAESYPF--MS------VK--------N--LLTV-Y 221 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~-------ey~vvft~naT~al~lv~~sl~~--~~------gd--------~--ilt~-~ 221 (632)
...+.+++++.+++++|++++ ...++||+|+|+|+.+++.+... .+ || + |+++ .
T Consensus 111 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~ 190 (486)
T 1js3_A 111 CTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQ 190 (486)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETT
T ss_pred HHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCC
Confidence 357778899999999999852 13589999999998887755411 01 32 4 4444 4
Q ss_pred cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC
Q 006746 222 DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN 300 (632)
Q Consensus 222 d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~ 300 (632)
.|++ + ...++..|++++.+|++ +++.+|+++|+++|+++++....+.+|++++.+|.||...|++ |+++|+++
T Consensus 191 ~h~s--~---~~~~~~~G~~v~~v~~d-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~ 264 (486)
T 1js3_A 191 AHSS--V---ERAGLIGGVKLKAIPSD-GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEE 264 (486)
T ss_dssp CCHH--H---HHHHHHHTCEEEEECCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT
T ss_pred CcHH--H---HHHHHhCCCceEEeecC-CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHc
Confidence 5653 2 34566779999999997 6889999999999987652222345899999999999999999 99999999
Q ss_pred CcEEEEeccccCCCCCCCC-CC-----CCCCCcEEEEccccccCCCCCceEEEEEeCCC--ccccC--CCCCC-Cceeec
Q 006746 301 DWHILIDACALGPKDMDSF-GL-----SLVRPDFLICSFYQIFGENPSGFGCLFVKKST--VPILV--DNTSS-GMVSLL 369 (632)
Q Consensus 301 g~~vlvDaaq~~g~~m~~l-dl-----s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~--~~~L~--~~~~g-G~v~~~ 369 (632)
|++++||+|+.++.- .. +. ...++|++++++||+++. |.|+|+++++++. .+.+. +.+.. +...
T Consensus 265 ~~~lhvD~a~g~~~~--~~~~~~~~~~g~~~adsi~~~~hK~~~~-p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~-- 339 (486)
T 1js3_A 265 DIWLHVDAAYAGSAF--ICPEFRHLLNGVEFADSFNFNPHKWLLV-NFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQG-- 339 (486)
T ss_dssp TCEEEEECTTGGGGG--GSTTTGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESCHHHHHGGGC--------------
T ss_pred CCEEEEehhhHHHHH--HCHHHHHHhcCccccCeeEEchhhhcCC-CcceEEEEEeCHHHHHHHhcCCchhhCCCccc--
Confidence 999999999876431 11 11 113689999999998886 8899999998763 23332 22211 1100
Q ss_pred ccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCch
Q 006746 370 PAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSE 449 (632)
Q Consensus 370 ~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 449 (632)
....+ .+. .-+.... ... ...++.
T Consensus 340 --~~~~~-----------------~~~---~~~~~~~------------rr~-~~~~~~--------------------- 363 (486)
T 1js3_A 340 --SGLIT-----------------DYR---HWQLPLG------------RRF-RSLKMW--------------------- 363 (486)
T ss_dssp --CCSCC-----------------CGG---GSSSCSC------------CCC-THHHHH---------------------
T ss_pred --ccCCC-----------------Ccc---ccCCCCC------------Cch-hHHHHH---------------------
Confidence 00000 000 0000000 000 011222
Q ss_pred hhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHH
Q 006746 450 IECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQK 529 (632)
Q Consensus 450 ~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~k 529 (632)
.++..+...|++.+.++...+++++.+.|.++ |.++++++. ..++++|.+.+.+ .+...+.++
T Consensus 364 ---~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--------~~~~~~~~~----~~~~v~f~~~~~~--~~~~~l~~~ 426 (486)
T 1js3_A 364 ---FVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD--------PRFEVCAEV----TLGLVCFRLKGSD--GLNEALLER 426 (486)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------TTEEECSCC----CSSEEEEEESSCH--HHHHHHHHH
T ss_pred ---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC--------CCeEEeCCC----ceeEEEEEecChH--HHHHHHHHH
Confidence 56665555688899999999999999999987 779998752 4789999886421 123333344
Q ss_pred HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEcc-CCCCCHHHHHHHHHHHHH
Q 006746 530 LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQ 608 (632)
Q Consensus 530 la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSl-g~~~t~eDV~rlv~~l~~ 608 (632)
|.+ .|+.+..+. ...+.+++|+|+ +.++|.+||+++++.|++
T Consensus 427 L~~-~g~~~~~~~------------------------------------~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 469 (486)
T 1js3_A 427 INS-ARKIHLVPC------------------------------------RLRGQFVLRFAICSRKVESGHVRLAWEHIRG 469 (486)
T ss_dssp HHH-HTSCBCEEE------------------------------------EETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHh-cCCEEEEEE------------------------------------EECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 443 454322110 001246999996 788999999999999999
Q ss_pred hhhh
Q 006746 609 FLDA 612 (632)
Q Consensus 609 ~l~~ 612 (632)
+++.
T Consensus 470 ~~~~ 473 (486)
T 1js3_A 470 LAAE 473 (486)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 73
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.89 E-value=8e-22 Score=210.74 Aligned_cols=337 Identities=11% Similarity=0.014 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
....+.|+.+++++|++ .+++|+|+|+|+.+++.++.+++||+|++. ..|++ . ...++..|++++.++++
T Consensus 39 ~~~~~l~~~la~~~~~~----~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~ 109 (393)
T 1mdo_A 39 PKNQELEAAFCRLTGNQ----YAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVS-T----LNMIVLLGANPVMVDVD 109 (393)
T ss_dssp HHHHHHHHHHHHHHCCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHH-H----HHHHHHTTCEEEEECBC
T ss_pred hHHHHHHHHHHHHhCCC----cEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHh-H----HHHHHHCCCEEEEEecc
Confidence 45678999999999985 589999999999999999977899997654 56664 2 23456789999999987
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC-C
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR-P 326 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~-~ 326 (632)
+.++.+++++|+++|+++ +++|+++ ++||...|++ |.++|+++|+++++|+++..|.. . +...++ +
T Consensus 110 ~~~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~--~-~~~~~~~~ 177 (393)
T 1mdo_A 110 RDTLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTS--Y-KGRHIGAR 177 (393)
T ss_dssp TTTCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCE--E-TTEETTSS
T ss_pred CCcCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCe--E-CCeecCCC
Confidence 444679999999988653 4777765 4799999999 99999999999999999987641 1 112234 8
Q ss_pred cEEEEccc--cccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcccc
Q 006746 327 DFLICSFY--QIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 403 (632)
Q Consensus 327 Df~~~S~h--K~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~ 403 (632)
|++++|+| |+++ |...|+++.+ ++.++.+.+...+|... .....++... +..+ +.++
T Consensus 178 d~~~~S~~k~K~l~--~~~~g~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~------------~~~~---~~~~- 237 (393)
T 1mdo_A 178 GTAIFSFHAIKNIT--CAEGGIVVTDNPQFADKLRSLKFHGLGV--DAWDRQSGGR------------APQA---EVLA- 237 (393)
T ss_dssp SEEEEECCTTSSSC--SSSCEEEEESCHHHHHHHHHHTBTTEEC--C-----------------------CC---EESS-
T ss_pred CeEEEeCCCCCccc--cccceEEEeCCHHHHHHHHHHHhcCCcc--cchhhhcccc------------cccc---cccc-
Confidence 99999999 8777 4356777775 45655554422222210 0000000000 0000 0011
Q ss_pred CCCccchhhhhhcCC-cccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Q 006746 404 TFSGPMSIEMRQSGK-LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 482 (632)
Q Consensus 404 ~f~~~~~~~~~~~Gt-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~ 482 (632)
.|+ ..++.+.+. .++..+ .+++.+.++.+.+.++|.+.|.
T Consensus 238 ------------~g~~~~~~~~~~a-------------------------~~~~~l--~~~~~~~~~~~~~~~~l~~~L~ 278 (393)
T 1mdo_A 238 ------------PGYKYNLPDLNAA-------------------------IALAQL--QKLDALNARRAAIAAQYHQAMA 278 (393)
T ss_dssp ------------CCCBCCCCHHHHH-------------------------HHHHHH--HTHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------cCccCCCCHHHHH-------------------------HHHHHH--HHHHHHHHHHHHHHHHHHHHHh
Confidence 111 111111111 223333 2578888899999999999999
Q ss_pred ccCCCCCCCCCcEEEECCCCCC--CCCcEEEEEEccC-CCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 483 KLQHPNTEGNALVKIYGPKIRF--DRGPALAFNVFDW-KREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 483 ~l~h~~~~G~p~v~Iygp~~~~--~rg~ivaFnv~~~-~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
++ + ++++++.... ..+.++.+.+.+. .| ++...+.+.+.++||.++.|..|.... .+... +
T Consensus 279 ~~--------~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~l~~~gi~v~~~~~~~~~~--~~~~~-~-- 342 (393)
T 1mdo_A 279 DL--------P-FQPLSLPSWEHIHAWHLFIIRVDEARCG--ITRDALMASLKTKGIGTGLHFRAAHTQ--KYYRE-R-- 342 (393)
T ss_dssp TS--------S-CEECCCCSSCEECCCSCEEEECCHHHHS--SCHHHHHHHHHHTTBCCBCCCCCGGGS--HHHHH-H--
T ss_pred cC--------C-cccccCCCCCCCceeEEEEEEecccccc--cCHHHHHHHHHhCCCCcccccCccccC--hhhhc-c--
Confidence 87 5 6776542111 2234677776520 01 466777777777899999998774321 11000 0
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..... +... .......||+|++.++|.+||+++++.|++++..
T Consensus 343 ~~~~~-~~~~---------~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 343 FPTLT-LPDT---------EWNSERICSLPLFPDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp STTCC-CHHH---------HHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred CCccC-ChhH---------HHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence 00000 0000 0012358999999999999999999999998764
No 74
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.89 E-value=4.5e-21 Score=200.34 Aligned_cols=315 Identities=14% Similarity=0.170 Sum_probs=216.2
Q ss_pred CCceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
++.++|+.+-.. ..|+.+++++....... ..|. ...+.+.|+.|++++|+
T Consensus 16 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~--------------------------~~y~---~~~~~~lr~~la~~~~~ 66 (337)
T 3p1t_A 16 AQAVCLAFNENPEAVEPRVQAAIAAAAARI--------------------------NRYP---FDAEPRVMRKLAEHFSC 66 (337)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHGGGT--------------------------TSCC---TTHHHHHHHHHHHHHTS
T ss_pred CCceEeeCCCCCCCCCHHHHHHHHHhhhhh--------------------------ccCC---CCchHHHHHHHHHHhCc
Confidence 457899988554 46777888766533211 0011 12356899999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
+++ .|+||+|+|+++++++.++ +||+|++. ..|++ ....++..|++++.++.+ +++.+++++|+++
T Consensus 67 ~~~--~i~~t~G~~~~l~~~~~~~---~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~-- 133 (337)
T 3p1t_A 67 PED--NLMLVRGIDECFDRISAEF---SSMRFVTAWPGFDG-----YRARIAVSGLRHFEIGLT-DDLLLDPNDLAQV-- 133 (337)
T ss_dssp CGG--GEEEESHHHHHHHHHHHHS---TTSEEEEESSSCSH-----HHHHHTTSCCEEEEECBC-TTSSBCHHHHTTC--
T ss_pred CHH--HEEEeCCHHHHHHHHHHhc---CCCeEEEeCCCcHH-----HHHHHHHcCCEEEEecCC-CCCCCCHHHHHhh--
Confidence 865 7999999999999999998 79997754 35543 234567889999999987 4567899988764
Q ss_pred hcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEecccc--CCCCCCCCCCCCCCCcEEEEccccccCCCC
Q 006746 265 SKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACAL--GPKDMDSFGLSLVRPDFLICSFYQIFGENP 341 (632)
Q Consensus 265 ~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~--~g~~m~~ldls~~~~Df~~~S~hK~~G~~P 341 (632)
. +++++++++.+|+||..+|++ +.++|+++++ +++|.++. .+. ....+...+.|+++.|++|++|.++
T Consensus 134 ~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~--~~~~~~~~~~~i~~~S~sK~~g~~G 204 (337)
T 3p1t_A 134 S------RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSF--RARGLAYGENELVFRSFSKSYGLAG 204 (337)
T ss_dssp C------TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSC--SSSCCCCBTTEEEEEESSSTTCCTT
T ss_pred c------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccc--cccccccCCCEEEEeeCchhccCcc
Confidence 1 248999999999999999999 9999999997 56698765 332 2333344567899999999998433
Q ss_pred CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCccc
Q 006746 342 SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQ 421 (632)
Q Consensus 342 ~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~ 421 (632)
.++|+++++++.++.+...... | +.+.
T Consensus 205 ~r~G~~~~~~~~~~~l~~~~~~------------~-----------------------------------------~~~~ 231 (337)
T 3p1t_A 205 LRLGALFGPSELIAAMKRKQWF------------C-----------------------------------------NVGT 231 (337)
T ss_dssp TCCEEEECCHHHHHHHHTTSCT------------T-----------------------------------------CSCH
T ss_pred hheEEEEeCHHHHHHHHhhcCC------------C-----------------------------------------CCCH
Confidence 4568888877665544321100 0 0111
Q ss_pred chhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCC
Q 006746 422 GEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 501 (632)
Q Consensus 422 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~ 501 (632)
+...++. .+|+... .++...++++...++|.+.|.++ |. +++.+
T Consensus 232 ~~~~a~~------------------------~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~------g~---~~~~~- 275 (337)
T 3p1t_A 232 LDLHALE------------------------AALDNDR--AREAHIAKTLAQRRRVADALRGL------GY---RVASS- 275 (337)
T ss_dssp HHHHHHH------------------------HHHTCHH--HHHHHHHHHHHHHHHHHHHHHHT------TC---CBCCC-
T ss_pred HHHHHHH------------------------HHhCCHH--HHHHHHHHHHHHHHHHHHHHHHC------cC---EECCC-
Confidence 1112121 3332211 24556667777788899999886 42 33332
Q ss_pred CCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCC
Q 006746 502 IRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 581 (632)
Q Consensus 502 ~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 581 (632)
.++.+.+...+ ...+.+++.++||.++.|..|.
T Consensus 276 ----~~~~~~~~~~~-------~~~~~~~l~~~gi~v~~g~~~~------------------------------------ 308 (337)
T 3p1t_A 276 ----EANFVLVENAA-------GERTLRFLRERGIQVKDAGQFG------------------------------------ 308 (337)
T ss_dssp ----SSSEEEEECTT-------THHHHHHHHHTTEECEEGGGGT------------------------------------
T ss_pred ----CCeEEEEEcCC-------HHHHHHHHHHCCeEEEECccCC------------------------------------
Confidence 45666665443 3466777788899998774331
Q ss_pred CCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 582 GITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 582 ~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|++ +.+|+++|+++|+++++
T Consensus 309 ~~~~iRis~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 309 LHHHIRISIG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp CCSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence 1359999987 89999999999998865
No 75
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.89 E-value=1.1e-21 Score=209.38 Aligned_cols=338 Identities=12% Similarity=0.138 Sum_probs=226.5
Q ss_pred CCceEeecCCC---C-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI---G-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (632)
Q Consensus 107 ~~~vyLD~ag~---g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~ 182 (632)
++..|+|.++. + ..++.+++++.+.+.... .++..+.+.+| ......+.|+.|+++
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~------------------~~~~~~~~~~g--~~~~~~~l~~~la~~ 96 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFG------------------IGSGGSGHVSG--YSVVHQALEEELAEW 96 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHC------------------SCCCSBTTTTC--CCHHHHHHHHHHHHH
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhC------------------CCCCCcCcccC--ChHHHHHHHHHHHHH
Confidence 35679998884 3 356778887665432110 01111222222 235678999999999
Q ss_pred cCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHH
Q 006746 183 LNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKM 262 (632)
Q Consensus 183 l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~ 262 (632)
+|++ +.+++.|+|+|+.+++.++ .++||.|++....|. .....++..|++++.+|. ++.++|+++
T Consensus 97 ~g~~----~~i~~~sGt~a~~~~~~~~-~~~gd~v~~~~~~~~----~~~~~~~~~g~~~~~~~~------~d~~~l~~~ 161 (384)
T 1bs0_A 97 LGYS----RALLFISGFAANQAVIAAM-MAKEDRIAADRLSHA----SLLEAASLSPSQLRRFAH------NDVTHLARL 161 (384)
T ss_dssp HTCS----EEEEESCHHHHHHHHHHHH-CCTTCEEEEETTCCH----HHHHHHHTSSSEEEEECT------TCHHHHHHH
T ss_pred hCCC----cEEEeCCcHHHHHHHHHHh-CCCCcEEEEcccccH----HHHHHHHHcCCCEEEeCC------CCHHHHHHH
Confidence 9985 3666777799999999988 678999876654443 122345668999988864 478899999
Q ss_pred HHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC-C--CCCC-CCCCCCCcEEEEcccccc
Q 006746 263 VVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK-D--MDSF-GLSLVRPDFLICSFYQIF 337 (632)
Q Consensus 263 i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~-~--m~~l-dls~~~~Df~~~S~hK~~ 337 (632)
|++.. ..+++++++..+|+||..+|++ |.++|+++|+++++|.++..+. . ...+ +.-..++|+++.|+||++
T Consensus 162 l~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~ 238 (384)
T 1bs0_A 162 LASPC---PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF 238 (384)
T ss_dssp HHSCC---SSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT
T ss_pred HHhcC---CCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh
Confidence 97642 1358999999999999999999 9999999999999999987653 0 0011 111135899999999999
Q ss_pred CCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcC
Q 006746 338 GENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSG 417 (632)
Q Consensus 338 G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~G 417 (632)
| |.| |+++++++.++.+.... ..| ..+ +
T Consensus 239 ~--~~G-G~~~~~~~~~~~l~~~~------------~~~----------------------~~~---------------~ 266 (384)
T 1bs0_A 239 G--VSG-AAVLCSSTVADYLLQFA------------RHL----------------------IYS---------------T 266 (384)
T ss_dssp S--SCC-EEEEECHHHHHHHHHHC------------HHH----------------------HSS---------------B
T ss_pred h--ccC-cEEEeCHHHHHHHHHhc------------hhh----------------------hcC---------------C
Confidence 9 778 99999877655443210 000 000 0
Q ss_pred CcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEE
Q 006746 418 KLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKI 497 (632)
Q Consensus 418 t~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~I 497 (632)
+.+.....++. ++|+.+.+..++.+.++.+.+.+++.+.|.++ | +++
T Consensus 267 ~~~~~~~~~~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~ 313 (384)
T 1bs0_A 267 SMPPAQAQALR------------------------ASLAVIRSDEGDARREKLAALITRFRAGVQDL------P---FTL 313 (384)
T ss_dssp CCCHHHHHHHH------------------------HHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS------S---CEE
T ss_pred CCCHHHHHHHH------------------------HHHHHHhccccHHHHHHHHHHHHHHHHHHHhc------C---Ccc
Confidence 01112222222 56776653245788899999999999999887 4 455
Q ss_pred ECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccc
Q 006746 498 YGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKD 577 (632)
Q Consensus 498 ygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 577 (632)
+. ..++++.+.+.+ + ++...+.+.+.++||.++.|....
T Consensus 314 ~~-----~~~~~~~~~~~~--~--~~~~~l~~~l~~~gi~v~~~~~~~-------------------------------- 352 (384)
T 1bs0_A 314 AD-----SCSAIQPLIVGD--N--SRALQLAEKLRQQGCWVTAIRPPT-------------------------------- 352 (384)
T ss_dssp CS-----CCSSBCCEEEES--H--HHHHHHHHHHHHTTEECCEECTTS--------------------------------
T ss_pred cC-----CCCCEEEEEeCC--H--HHHHHHHHHHHHCCcEEEeecCCC--------------------------------
Confidence 42 246677677653 1 344555555555699998663210
Q ss_pred cCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 578 KANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 578 ~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
...+.+.||+|++.+++.+||+++++.|+++
T Consensus 353 -~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 353 -VPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp -SCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred -CCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 0113468999999999999999999999864
No 76
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.89 E-value=3e-21 Score=205.70 Aligned_cols=347 Identities=9% Similarity=0.083 Sum_probs=229.9
Q ss_pred HHHHHHhhccCcCCCCceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHH
Q 006746 93 IDQIRAKEYYQLSLSNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGL 171 (632)
Q Consensus 93 ~d~iR~~ef~~L~~~~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~ 171 (632)
+|... ++|.. .+.+.|..+..+ +.|+.+++++.+.+... .+ .|+....++
T Consensus 22 ~d~~~-~~~~~---~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~------------~~-------------~y~~~~~~~ 72 (391)
T 4dq6_A 22 WSEME-KKYGT---NDLLPMWVADMDFKAAPCIIDSLKNRLEQE------------IY-------------GYTTRPDSY 72 (391)
T ss_dssp HHCHH-HHHSC---SCSEECCSSSCSSCCCHHHHHHHHHHHTTC------------CC-------------CCBCCCHHH
T ss_pred eeecc-cccCC---CCceeccccCCCCCCCHHHHHHHHHHHhCC------------CC-------------CCCCCCHHH
Confidence 34333 45741 457788776655 44678888876543210 00 011112467
Q ss_pred HHHHHHHHHHHcC--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 172 ESAMKKRIMDFLN--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 172 ~~~~R~~ia~~l~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
.+++++.+++++| ++++ .|+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.++++
T Consensus 73 ~~~l~~~l~~~~g~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~-----~~~~~~~~g~~~~~~~~~ 144 (391)
T 4dq6_A 73 NESIVNWLYRRHNWKIKSE--WLIYSPGVIPAISLLINEL-TKANDKIMIQEPVYSP-----FNSVVKNNNRELIISPLQ 144 (391)
T ss_dssp HHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCTH-----HHHHHHHTTCEEEECCCE
T ss_pred HHHHHHHHHHHhCCCCcHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCHH-----HHHHHHHcCCeEEeeeee
Confidence 7899999999999 5544 7999999999999999998 7889997754 45553 234557789999999887
Q ss_pred -CC--ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 249 -WP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 249 -~~--~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
+. +..+++++|++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++.. |. .
T Consensus 145 ~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~ 215 (391)
T 4dq6_A 145 KLENGNYIMDYEDIENKIKD-------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH--K 215 (391)
T ss_dssp ECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--C
T ss_pred ecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC--C
Confidence 33 335899999998865 489999999999999965 56 77889999999999999876 22 1
Q ss_pred CCCCCCCCCc-----EEEEccccccCCCCCceEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 318 SFGLSLVRPD-----FLICSFYQIFGENPSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 318 ~ldls~~~~D-----f~~~S~hK~~G~~P~G~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
...+..+.+| +++.|++|.+|.+..++|++++++ +.++.+....
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~------------------------------ 265 (391)
T 4dq6_A 216 HIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAF------------------------------ 265 (391)
T ss_dssp CCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHH------------------------------
T ss_pred ccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHH------------------------------
Confidence 2333333334 999999999883223468887765 4433332110
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGR 471 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~ 471 (632)
...+ .++++.+...++. .+|+...+ .++.+.++.+
T Consensus 266 -------~~~~-------------~~~~~~~~~~a~~------------------------~~l~~~~~-~~~~~~~~~~ 300 (391)
T 4dq6_A 266 -------TRID-------------IKRNNCFSLVATE------------------------ASYNNGES-WLESFLEYLE 300 (391)
T ss_dssp -------HHTT-------------CCCCCHHHHHHHH------------------------HHHHHCHH-HHHHHHHHHH
T ss_pred -------Hhhc-------------CCCCCHHHHHHHH------------------------HHHhchHH-HHHHHHHHHH
Confidence 0000 0112222222222 44443222 2678888999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEE-EEEccCCCCccCHHHHHHHH-HhCCcEEccCccCChHHH
Q 006746 472 CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALA-FNVFDWKREKIEPVLVQKLA-DRENISLSYGSLHHIWFS 549 (632)
Q Consensus 472 ~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~iva-Fnv~~~~G~~i~~~~V~kla-~~~gI~lr~G~~c~~~~~ 549 (632)
.+.+++.+.|.+. .|.++++.|. ++.+. +.+... + ++...+.+.+ +++||.++.|..|..
T Consensus 301 ~~~~~l~~~l~~~-------~~~~~~~~~~-----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~--- 362 (391)
T 4dq6_A 301 SNIDFAIKYINEN-------MPKLKVRKPE-----GTYLLWVDFSAL-G--LSDEELESILVQKGKVALNQGNSFGI--- 362 (391)
T ss_dssp HHHHHHHHHHHHH-------CTTSEECCCS-----BSSEEEEECGGG-C--CCHHHHHHHHHHTTCEECEEGGGGCT---
T ss_pred HHHHHHHHHHHhh-------CCCCEecCCC-----ccEEEEEEhhhc-C--CCHHHHHHHHHHhCCEEeeCchhhCC---
Confidence 9999999999873 1567777653 34443 566531 1 4566665544 445999988754432
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+.+.||+|++ ++.|||+++++.|++.++
T Consensus 363 -------------------------------~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 391 (391)
T 4dq6_A 363 -------------------------------GGSGYQRINLA--CPRSMLEEALIRIKNAIN 391 (391)
T ss_dssp -------------------------------TCTTEEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred -------------------------------CCCCeEEEEEc--CCHHHHHHHHHHHHHHhC
Confidence 13469999999 799999999999998763
No 77
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.89 E-value=9.3e-22 Score=208.80 Aligned_cols=319 Identities=12% Similarity=0.077 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
....+.|++++++++++ .++||+|+|+|+.+++.++.+++||+|++ ...|++ . ...++..|++++.++.+
T Consensus 38 ~~~~~l~~~la~~~~~~----~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~-~----~~~~~~~g~~~~~~~~~ 108 (374)
T 3uwc_A 38 AELEKFEKRFAALHNAP----HAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIA-S----VGAIVQAGATPVLVDSE 108 (374)
T ss_dssp HHHHHHHHHHHHHTTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHH-H----HHHHHHTTCEEEEECBC
T ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHH-H----HHHHHHcCCEEEEEecC
Confidence 45678999999999986 58999999999999999997889999765 456664 2 23457789999999998
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC--
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR-- 325 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~-- 325 (632)
.++.+|+++++++++++ +++++ .+|+||...|++ |.++|+++|+++++|.++..+. .++...++
T Consensus 109 -~~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~---~~~~~~~~~~ 175 (374)
T 3uwc_A 109 -NGYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILG---RINDKFVGSW 175 (374)
T ss_dssp -TTSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTC---EETTEETTSS
T ss_pred -CCCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCc---eeCCeecccc
Confidence 67778999998887653 46666 677999999999 9999999999999999998875 23333333
Q ss_pred CcEEEEccc--cccCCCCCc-eEEEEEeCC-CccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 326 PDFLICSFY--QIFGENPSG-FGCLFVKKS-TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 326 ~Df~~~S~h--K~~G~~P~G-~G~L~Vr~~-~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
+|++++|+| |++| |.| .|+++.++. ..+.+.+...+|... .++ .. ..
T Consensus 176 ~d~~~~s~~~~K~l~--~~g~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~--------------------~~ 226 (374)
T 3uwc_A 176 GQFACFSLHPLKNLN--VWSDAGVIITHSDEYAEKLRLYRNHGLIN------RDV-CV--------------------EY 226 (374)
T ss_dssp SSEEEEECSSSSSSC--CSSCCEEEEESCHHHHHHHHHHTBTTEEE------TTE-ES--------------------SC
T ss_pred ccEEEEeCCCCCcCC--ccceeEEEEeCCHHHHHHHHHHHhcCccc------cCc-cc--------------------cc
Confidence 699999999 9988 534 555555553 333333322112110 000 00 00
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
+.++ .+..+. .++......+++.+.+|.+.+.+++.+.|
T Consensus 227 ~~~~-----------------~~~~~~------------------------aa~~~~~~~~~~~~~~~~~~~~~~l~~~l 265 (374)
T 3uwc_A 227 GINC-----------------RMDTIQ------------------------AVIANRLMNQLETITEKRRGIAHLYDQSF 265 (374)
T ss_dssp CCBC-----------------BCCHHH------------------------HHHHHHHGGGHHHHHHHHHHHHHHHHHHT
T ss_pred cccC-----------------CCCHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0011 011122 45555555578889999999999999999
Q ss_pred HccCCCCCCCCCc-EEEECCCCCCCC-CcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCc----cCChHHHhHHHHh
Q 006746 482 MKLQHPNTEGNAL-VKIYGPKIRFDR-GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGS----LHHIWFSDKYQKE 555 (632)
Q Consensus 482 ~~l~h~~~~G~p~-v~Iygp~~~~~r-g~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~----~c~~~~~~~~~~~ 555 (632)
.++ +. +++..+. ..+ ...+.|.+.. .+...+.+.+.++||.++.|+ +|.+.+... +
T Consensus 266 ~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~--~- 327 (374)
T 3uwc_A 266 VDL--------SEFIDVPVRR--EGVYHVFHIYVLRV-----KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSL--G- 327 (374)
T ss_dssp GGG--------TTTEECCCCC--TTEECCCSSEEEEE-----TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGG--C-
T ss_pred ccC--------CCeEEeccCC--CCCceeeEEEEEEc-----CCHHHHHHHHHHCCCccccCCCCccccChhhhhc--C-
Confidence 887 44 5553322 122 2223454443 256677777777899999885 333321100 0
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.... +. . ........||+|++.++|.|||+++++.|+++++.
T Consensus 328 ----~~~~~-~~-----~----~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 328 ----YQQGD-FP-----M----AEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp ----CCTTS-CH-----H----HHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred ----CccCC-Cc-----c----HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 00000 00 0 00012369999999999999999999999998764
No 78
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.88 E-value=2.8e-21 Score=214.16 Aligned_cols=325 Identities=10% Similarity=0.020 Sum_probs=214.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCC--------ccEEEeCCHHHHHHHHHhhCCC------------------CCCCeEEEec
Q 006746 168 ESGLESAMKKRIMDFLNISEND--------YGMVFTANRTSAFKLLAESYPF------------------MSVKNLLTVY 221 (632)
Q Consensus 168 ~~~~~~~~R~~ia~~l~a~~~e--------y~vvft~naT~al~lv~~sl~~------------------~~gd~ilt~~ 221 (632)
..++.+++.+.+++++|.+.+. -..+||+++|+|+.+.+..... .+++.|+++.
T Consensus 116 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~ 195 (481)
T 4e1o_A 116 CTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASD 195 (481)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEET
T ss_pred HHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcC
Confidence 3577888889999999997531 1578999999998765544311 1355666554
Q ss_pred -cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 222 -DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 222 -d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.|.+ + .+.++..|++++.+|.+ +++.+|+++|+++|++++.....+.++++++.++.||..-|++ |+++|++
T Consensus 196 ~~H~s--~---~~~~~~~g~~~~~v~~~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~ 269 (481)
T 4e1o_A 196 QAHSS--V---EKAGLISLVKMKFLPVD-DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAR 269 (481)
T ss_dssp TSCHH--H---HHHHHHHTCEEEEECCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred cchHH--H---HHHHHhCCCceEEEEcC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHH
Confidence 5543 2 23345579999999997 6789999999999986532223467899999999999999999 9999999
Q ss_pred CCcEEEEeccccCCCCCC-CCC--CC-CCCCcEEEEccccccCCCCCceEEEEEeCCCc--ccc--CCCCCCCceeeccc
Q 006746 300 NDWHILIDACALGPKDMD-SFG--LS-LVRPDFLICSFYQIFGENPSGFGCLFVKKSTV--PIL--VDNTSSGMVSLLPA 371 (632)
Q Consensus 300 ~g~~vlvDaaq~~g~~m~-~ld--ls-~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~--~~L--~~~~~gG~v~~~~~ 371 (632)
+|++++||+|+.++.-.. ... +. ...+|++++++||+++. |.|+|+++++++.. ..+ .+.+..+.
T Consensus 270 ~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~g~g~l~~~~~~~l~~~~~~~~~yl~~~------ 342 (481)
T 4e1o_A 270 EGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMV-HFDCTGFWVKDKYKLQQTFSVNPIYLRHA------ 342 (481)
T ss_dssp HTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESBHHHHHTTTCCCCGGGCCT------
T ss_pred cCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCC-CCceEEEEEeCHHHHHHHhcCCchhccCc------
Confidence 999999999987652101 111 11 11459999999998876 99999999998643 111 11111100
Q ss_pred ccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhh
Q 006746 372 KKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIE 451 (632)
Q Consensus 372 ~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 451 (632)
..+. . +.+. .-+... +.. ....++-
T Consensus 343 -------~~~~---~------~~~~---~~~~~~------------~r~-~~~l~~~----------------------- 367 (481)
T 4e1o_A 343 -------NSGV---A------TDFM---HWQIPL------------SRR-FRSVKLW----------------------- 367 (481)
T ss_dssp -------TTTT---S------CCGG---GGSSSS------------CCC-CTHHHHH-----------------------
T ss_pred -------ccCC---C------CCcc---cccccC------------CCC-ccHHHHH-----------------------
Confidence 0000 0 0000 000000 000 1112222
Q ss_pred hhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHH
Q 006746 452 CRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLA 531 (632)
Q Consensus 452 ~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla 531 (632)
.+|..+...|++.+.+|...+++++.+.|.++ |.++++.+. ..++|+|.+.+.+ ....++.+++.
T Consensus 368 -~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--------~g~~~~~~~----~~~~v~f~~~~~~--~~~~~l~~~L~ 432 (481)
T 4e1o_A 368 -FVIRSFGVKNLQAHVRHGTEMAKYFESLVRND--------PSFEIPAKR----HLGLVVFRLKGPN--SLTENVLKEIA 432 (481)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------TTEECCSCC----CSSEEEEEESSCH--HHHHHHHHHHH
T ss_pred -HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCeEEecCC----ceeEEEEEeCCch--HHHHHHHHHHH
Confidence 56666666788999999999999999999987 778888763 5789999986521 12233444454
Q ss_pred HhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccC-CCCCHHHHHHHHHHHHHhh
Q 006746 532 DRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLG-YLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 532 ~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg-~~~t~eDV~rlv~~l~~~l 610 (632)
++..+.+..+ ...+...+|+++. +.+|.+||+++++.|++++
T Consensus 433 ~~g~~~~~~~-------------------------------------~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~ 475 (481)
T 4e1o_A 433 KAGRLFLIPA-------------------------------------TIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAA 475 (481)
T ss_dssp HHCSSBCEEE-------------------------------------EETTEEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hCCeEEEEee-------------------------------------EECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 4432332211 0113468999965 6679999999999999887
Q ss_pred hh
Q 006746 611 DA 612 (632)
Q Consensus 611 ~~ 612 (632)
+.
T Consensus 476 ~~ 477 (481)
T 4e1o_A 476 TL 477 (481)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 79
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.88 E-value=2.4e-21 Score=210.18 Aligned_cols=317 Identities=12% Similarity=-0.027 Sum_probs=211.5
Q ss_pred HHHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCC-CCCCC--eEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 173 SAMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYP-FMSVK--NLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 173 ~~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~-~~~gd--~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
.+.|+.|+++++ ++++ .|+||+|+|+|+.+++.++. +++|| +|++. ..|++ ....++..|+++
T Consensus 85 ~~lr~~la~~~~~~~g~~~~~~--~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~-----~~~~~~~~g~~~ 157 (437)
T 3g0t_A 85 PELKQEASRFAKLFVNIDIPAR--ACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNL-----NKLQCRILGQKF 157 (437)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHH-----HHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHhhCCCCCcc--cEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHh-----HHHHHHHcCCEE
Confidence 367888888877 4554 79999999999999999983 28899 87654 45553 234556789999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCC--CC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPK--DM 316 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~--~m 316 (632)
+.++++..+..+|+++|++++... +++++++++.+|+||..+| ++ |+++|+++|+++++|.++.... ..
T Consensus 158 ~~v~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~ 232 (437)
T 3g0t_A 158 ESFDLFEYRGEKLREKLESYLQTG-----QFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD 232 (437)
T ss_dssp EEEEGGGGCTTHHHHHHHHHHTTT-----CCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC
T ss_pred EEEeecCCCCccCHHHHHHHHhcC-----CceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC
Confidence 999997344468999999999321 3588999999999999998 55 6888999999999999986421 00
Q ss_pred CC--------CCCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCcc-ccCCC---CCCCceeecccccccccccccCC
Q 006746 317 DS--------FGLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVP-ILVDN---TSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 317 ~~--------ldls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~-~L~~~---~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
.+ .++.. .+.++++.|++|.+|.+..++|+++++++.++ .+... ..++... ..++ .
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~---- 301 (437)
T 3g0t_A 233 YSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFG-----EALS--S---- 301 (437)
T ss_dssp CCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHH-----HHHH--T----
T ss_pred cCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchh-----HHHH--H----
Confidence 12 23333 67789999999999932223899999877655 42211 1110000 0000 0
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC-
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG- 462 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G- 462 (632)
.. ...+ ..+.+.+...++. .+|+......
T Consensus 302 ----------~~---~~~~-------------~~~~~~~~~~a~~------------------------~~l~~~~~~~~ 331 (437)
T 3g0t_A 302 ----------SA---LYAL-------------SSGATHSAQWGMA------------------------AMLKACNDGEY 331 (437)
T ss_dssp ----------TH---HHHH-------------HSSSCHHHHHHHH------------------------HHHHHHHTTSC
T ss_pred ----------HH---Hhhh-------------cCCCCHHHHHHHH------------------------HHHhCcHhHHH
Confidence 00 0000 1112222223222 4555443211
Q ss_pred -HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCC---CCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEE
Q 006746 463 -LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI---RFDRGPALAFNVFDWKREKIEPVLVQKLADRENISL 538 (632)
Q Consensus 463 -l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~---~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~l 538 (632)
++.+.++.+.+.+++.+.|.++ | ++++.+.. +...+..+.+.+.+ ++...+.+.+.++||.+
T Consensus 332 ~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gi~v 397 (437)
T 3g0t_A 332 NFRDSVIEYGRKARIMKKMFLDN------G---FNIVYDKDGNEPLADGFYFTVGYKG-----MDSSKLIEKFVRYGMCA 397 (437)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT------T---EEESSCEETTEECCSSSEEEEEETT-----CCHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc------C---CEEeccccCCCCCceeEEEEEecCC-----CCHHHHHHHHHHcCeEE
Confidence 8899999999999999999987 3 56662110 01345667777763 56667766666779999
Q ss_pred ccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 539 SYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 539 r~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+.|..|.. ...+.||+|++.. |.+||+++++.|++++.
T Consensus 398 ~~~~~~~~----------------------------------~~~~~iRis~~~~-~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 398 ITLKTTGS----------------------------------KRNEAMRICTSLL-PESQFPDLEKRLQMLNA 435 (437)
T ss_dssp EESTTTTC----------------------------------CCTTCEEEECSSS-CGGGHHHHHHHHHHHHH
T ss_pred eeccccCC----------------------------------CCCCEEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 87754431 1225899999954 99999999999998865
No 80
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.88 E-value=2.1e-21 Score=207.90 Aligned_cols=324 Identities=12% Similarity=0.102 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
....+.|+.+++++|++ .++||+|+|+|+.+++.++.+++||+|++ ...|++ . ...++..|++++.++++
T Consensus 56 ~~~~~l~~~la~~~~~~----~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~~~~~ 126 (391)
T 3dr4_A 56 RFIVEFEKAFADYCGVK----HAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIA-S----ANSVTYCGATPVLVDND 126 (391)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECBC
T ss_pred hHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHH-H----HHHHHHCCCEEEEEecC
Confidence 45679999999999986 58999999999999999987889999765 457765 2 23456789999999998
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
..++.+++++|+++++++ +++++ .+|+||...|++ |.++|+++|+++++|++|..|.......+..+ .|
T Consensus 127 ~~~~~~d~~~l~~~~~~~------~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~-~d 196 (391)
T 3dr4_A 127 PRTFNLDAAKLEALITPR------TKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSL-GD 196 (391)
T ss_dssp TTTCSBCGGGSGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SS
T ss_pred ccccCcCHHHHHHhcCCC------ceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeeccc-CC
Confidence 556788999998887653 46666 357999999999 99999999999999999987652111112222 36
Q ss_pred EEEEc--cccccCCCCCceEEEEEeCC-CccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccC
Q 006746 328 FLICS--FYQIFGENPSGFGCLFVKKS-TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 404 (632)
Q Consensus 328 f~~~S--~hK~~G~~P~G~G~L~Vr~~-~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~ 404 (632)
+.++| .||+++ +...|+++.+++ ..+.+.+...+|... ...+|.. ..|. +
T Consensus 197 i~~~S~s~~K~l~--~g~gg~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~--------------------~~g~-~ 249 (391)
T 3dr4_A 197 CATFSFFGNAIIT--TGEGGMITTNDDDLAAKMRLLRGQGMDP----NRRYWFP--------------------IVGF-N 249 (391)
T ss_dssp EEEEECBTTSSSC--CBSCEEEEESCHHHHHHHHHHHBTTCCT----TSTTCCS--------------------SCCC-B
T ss_pred EEEEECCCCCcCC--cCCeEEEEECCHHHHHHHHHHHhcCCCC----CCccccc--------------------cccc-c
Confidence 77777 559887 433455555543 333343322112110 0011100 0110 0
Q ss_pred CCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcc
Q 006746 405 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 484 (632)
Q Consensus 405 f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l 484 (632)
+ .+..+. .++......+++.+.+|.+.+.+++.+.|.++
T Consensus 250 ~-----------------~~~~l~------------------------aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 288 (391)
T 3dr4_A 250 Y-----------------RMTNIQ------------------------AAIGLAQLERVDEHLAARERVVGWYEQKLARL 288 (391)
T ss_dssp C-----------------BCCHHH------------------------HHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG
T ss_pred c-----------------CCCHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 0 011122 45555555678999999999999999999987
Q ss_pred CCCCCCCCCcEEEECC--CCC-CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCc---cCChHHHhHHHHhhhh
Q 006746 485 QHPNTEGNALVKIYGP--KIR-FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGS---LHHIWFSDKYQKEKDN 558 (632)
Q Consensus 485 ~h~~~~G~p~v~Iygp--~~~-~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~---~c~~~~~~~~~~~~~~ 558 (632)
| ++++.+ ... .....++.+.+.+..| ++...+.+.+.++||.++.|. +|.+.+..... ..
T Consensus 289 ------g---~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~---~~ 354 (391)
T 3dr4_A 289 ------G---NRVTKPHVALTGRHVFWMYTVRLGEGLS--TTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLAT---DD 354 (391)
T ss_dssp ------T---TSEECCCCCTTSCCCCSSEEEEECSSCS--SCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCC---TT
T ss_pred ------C---ccccCcCCCCCCcceeEEEEEEECCccc--hhHHHHHHHHHHCCCceeecCCccccChhhhhcCc---CC
Confidence 3 234454 211 1223456666664222 567778777778899999886 66654322100 00
Q ss_pred hhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 559 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 559 ~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+... .......||++++.++|.|||+++++.|++++
T Consensus 355 -------~~~~---------~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 355 -------LKIA---------EACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp -------CHHH---------HHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred -------ChHH---------HHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 0000 01123589999999999999999999998875
No 81
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.88 E-value=3.4e-21 Score=207.27 Aligned_cols=331 Identities=12% Similarity=0.014 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+.+.|++|++++|++ .|+||+|+|+|+.+++.++.+++||+|++ ...|++ ... .++..|++++.++++
T Consensus 32 ~~~~~l~~~la~~~~~~----~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~-~~~----~~~~~g~~~~~v~~~ 102 (394)
T 1o69_A 32 EFVNRFEQSVKDYSKSE----NALALNSATAALHLALRVAGVKQDDIVLASSFTFIA-SVA----PICYLKAKPVFIDCD 102 (394)
T ss_dssp HHHHHHHHHHHHHHCCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGG-GTH----HHHHTTCEEEEECBC
T ss_pred hHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHH-HHH----HHHHcCCEEEEEEeC
Confidence 56679999999999983 69999999999999999987789999765 457775 222 234579999999998
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC---CCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL---SLV 324 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl---s~~ 324 (632)
.++.+|+++|+++|++.. .++++|++++ +||...|++ |.++|+++|+++++|+++..|.. ..+. +..
T Consensus 103 -~~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~--~~~~~~~~~~ 173 (394)
T 1o69_A 103 -ETYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSF--YKNKALGTFG 173 (394)
T ss_dssp -TTSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCE--ETTEETTSSS
T ss_pred -CCCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccce--eCCccccccc
Confidence 677899999999998621 1257888875 799999999 99999999999999999986541 1121 123
Q ss_pred CCcEEEEccccccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcccc
Q 006746 325 RPDFLICSFYQIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 403 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~ 403 (632)
++|++++|.+|.+| |.++|+++++ ++.++.+.+....|... .+ | +.. .+.|.
T Consensus 174 ~~~~~s~s~~K~l~--~~~~G~~~~~~~~l~~~l~~~~~~~~~~-~~-----~---------~~~---------~~~g~- 226 (394)
T 1o69_A 174 EFGVYSYNGNKIIT--TSGGGMLIGKNKEKIEKARFYSTQAREN-CL-----H---------YEH---------LDYGY- 226 (394)
T ss_dssp SEEEEECCTTSSSC--CSSCEEEEESCHHHHHHHHHHTBTCCCS-SS-----S---------CCC---------SSCCC-
T ss_pred CcEEEEEeCCccCC--CCCceEEEECCHHHHHHHHHHHHhcccc-Cc-----c---------ccc---------cccCc-
Confidence 57899999999888 7799999996 56555554321111100 00 0 000 00010
Q ss_pred CCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Q 006746 404 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK 483 (632)
Q Consensus 404 ~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~ 483 (632)
+.|++++....++. .++. ++.+.+|.+.+.+++.+.|.+
T Consensus 227 -----------~~~~~~~~aa~~l~-------------------------~l~~-----l~~~~~~~~~~~~~l~~~L~~ 265 (394)
T 1o69_A 227 -----------NYRLSNVLGAIGVA-------------------------QMEV-----LEQRVLKKREIYEWYKEFLGE 265 (394)
T ss_dssp -----------BCBCCHHHHHHHHH-------------------------HHTT-----HHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------ccCcCHHHHHHHHH-------------------------HHHH-----HHHHHHHHHHHHHHHHHHhcc
Confidence 12233333333321 2322 455778899999999999875
Q ss_pred cCCCCCCCCCcEEEECCCCCCCCC--cEEEEEEccCC---------------CC--ccCHHHHHHHHHhCCcEEccCccC
Q 006746 484 LQHPNTEGNALVKIYGPKIRFDRG--PALAFNVFDWK---------------RE--KIEPVLVQKLADRENISLSYGSLH 544 (632)
Q Consensus 484 l~h~~~~G~p~v~Iygp~~~~~rg--~ivaFnv~~~~---------------G~--~i~~~~V~kla~~~gI~lr~G~~c 544 (632)
+ ++++++.. ..++ .++.|.+.+.. |. .++...+.+.+.++||.++.|..|
T Consensus 266 ~----------~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~ 334 (394)
T 1o69_A 266 Y----------FSFLDELE-NSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKA 334 (394)
T ss_dssp T----------EECCCCCT-TEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCC
T ss_pred c----------ccccCCCC-CCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCc
Confidence 3 55555421 1122 26778776310 00 135667777777799999999655
Q ss_pred ChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 545 HIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
... ... +......+- .. ........+|+..+.++|.|||+++++.|++++..+
T Consensus 335 ~~~--~p~-------~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~~ 387 (394)
T 1o69_A 335 MHT--QEV-------FKGAKAYLN---GN----SELFFQKGICLPSGTAMSKDDVYEISKLILKSIKAG 387 (394)
T ss_dssp GGG--CGG-------GTTCEEEEC---SH----HHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred ccc--chh-------hhccCCCCC---hH----HHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 321 000 000000000 00 000011356666799999999999999999987654
No 82
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.88 E-value=3.7e-21 Score=205.46 Aligned_cols=297 Identities=12% Similarity=0.095 Sum_probs=202.2
Q ss_pred HHHHHHHHH----cCCCCCCc-cEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMDF----LNISENDY-GMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~~----l~a~~~ey-~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+.|+.++++ +|.+.+.. .|+||+|+|+|+.+++.++ .++||+|++ ...|++ . ...++..|++++.++.
T Consensus 71 ~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~v~~ 144 (386)
T 1u08_A 71 ALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITAL-VRNGDEVICFDPSYDS-Y----APAIALSGGIVKRMAL 144 (386)
T ss_dssp HHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHh-CCCCCEEEEeCCCchh-H----HHHHHHcCCEEEEeec
Confidence 556666665 47543333 6999999999999999998 688999765 456664 2 2345678999999998
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMDSF 319 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~~l 319 (632)
+..++.++.++|++++.+ +++++++++.+|+||..+| ++ |+++|+++|+++++|.++.. |....++
T Consensus 145 ~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~ 218 (386)
T 1u08_A 145 QPPHFRVDWQEFAALLSE------RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASV 218 (386)
T ss_dssp CTTTCCCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCG
T ss_pred CcccCcCCHHHHHHhhcc------cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcCh
Confidence 744567899999998864 3589999999999999997 46 78899999999999999875 2210122
Q ss_pred -CCC-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhh
Q 006746 320 -GLS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 320 -dls-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
.+. ..+.|+++.|++|+|| +.| +|+++++++.++.+..... .
T Consensus 219 ~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~--------------------------------~ 264 (386)
T 1u08_A 219 LAHPQLRERAVAVSSFGKTYH--MTGWKVGYCVAPAPISAEIRKVHQ--------------------------------Y 264 (386)
T ss_dssp GGSHHHHTTEEEEEEHHHHTT--CGGGCCEEEECCHHHHHHHHHHHH--------------------------------H
T ss_pred hcccCccCcEEEEecchhhcC--CcccceEEEEcCHHHHHHHHHHHH--------------------------------h
Confidence 221 3578999999999999 558 8999988766544432100 0
Q ss_pred hhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHH
Q 006746 396 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~ 475 (632)
. .+ +.+.+...++. .+|+.. ...++.+.++.+.+.+
T Consensus 265 ---~----~~------------~~~~~~~~a~~------------------------~~l~~~-~~~~~~~~~~~~~~~~ 300 (386)
T 1u08_A 265 ---L----TF------------SVNTPAQLALA------------------------DMLRAE-PEHYLALPDFYRQKRD 300 (386)
T ss_dssp ---H----TS------------SCCHHHHHHHH------------------------HHHHHC-THHHHTHHHHHHHHHH
T ss_pred ---h----cc------------CCChHHHHHHH------------------------HHHhCC-cHHHHHHHHHHHHHHH
Confidence 0 00 01111112221 455432 2246778889999999
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHH-HHHHhCCcEEccCccCChHHHhHHHH
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQ-KLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~-kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
+|.+.|.++ | ++++.|. .+..+.+.+.+.. .++...+. ++++++||.++.|..|..
T Consensus 301 ~l~~~L~~~------g---~~~~~~~----~g~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~-------- 357 (386)
T 1u08_A 301 ILVNALNES------R---LEILPCE----GTYFLLVDYSAVS--TLDDVEFCQWLTQEHGVAAIPLSVFCA-------- 357 (386)
T ss_dssp HHHHHTTSS------S---CEECCCC----BSSEEEEECTTTC--CSCHHHHHHHHHHHSCEECEEGGGGCS--------
T ss_pred HHHHHHHHC------C---CeecCCC----ceEEEEEecCCCC--CCCHHHHHHHHHHhCCEEEeCchHhCC--------
Confidence 999999876 3 4555542 3557777765421 03455554 566789999987632211
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
+..+.+.||+|++ ++.+||+++++.|++|
T Consensus 358 ------------------------~~~~~~~iRis~~--~~~~~i~~~~~~l~~~ 386 (386)
T 1u08_A 358 ------------------------DPFPHKLIRLCFA--KKESTLLAAAERLRQL 386 (386)
T ss_dssp ------------------------SCCCSCEEEEECC--SCHHHHHHHHHHHTTC
T ss_pred ------------------------CCCCCCEEEEEEc--CCHHHHHHHHHHHhhC
Confidence 0113468999998 4899999999988653
No 83
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.88 E-value=3e-21 Score=206.18 Aligned_cols=299 Identities=13% Similarity=0.119 Sum_probs=202.4
Q ss_pred HHHHHHHHHHc----CCCCCCcc-EEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 173 SAMKKRIMDFL----NISENDYG-MVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~ey~-vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.+.|+.+++++ |.+.+... |++|+|+|+|+.+++.++ .++||+|++ ...|++ . ...++..|++++.++
T Consensus 66 ~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~v~ 139 (389)
T 1gd9_A 66 LELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAF-LKDGEEVLIPTPAFVS-Y----APAVILAGGKPVEVP 139 (389)
T ss_dssp HHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTT-CCTTCEEEEEESCCTT-H----HHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHCCCEEEEec
Confidence 36677777777 84322226 999999999999999998 788999765 456764 2 234566899999999
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCCCC--CC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKDMD--SF 319 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~m~--~l 319 (632)
.++. ...+++++|+++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++..+..-. ..
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 213 (389)
T 1gd9_A 140 TYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHY 213 (389)
T ss_dssp CCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCC
T ss_pred cCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCC
Confidence 8732 3468999999988653 588999999999999996 77 8899999999999999987643100 11
Q ss_pred CCC----CCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 320 GLS----LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 320 dls----~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
++. ..+.|+++.|++|++| +.| +|+++++++.++.+.+...++ .|
T Consensus 214 ~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~~~----------~~----------------- 264 (389)
T 1gd9_A 214 SIASLDGMFERTITVNGFSKTFA--MTGWRLGFVAAPSWIIERMVKFQMYN----------AT----------------- 264 (389)
T ss_dssp CGGGSTTCGGGEEEEEESTTTTT--CGGGCCEEEECCHHHHHHHHHHHTTT----------TC-----------------
T ss_pred CHhhccCCCCCEEEEecChhhcC--CcccceEEEEECHHHHHHHHHHHhhh----------cc-----------------
Confidence 221 1467999999999999 557 699999876655443211000 00
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHh-hCHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDS-LGLTMISRRGRC 472 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~-~Gl~~I~~r~~~ 472 (632)
+.+.+...++. ++|+.... .+++.+.++.+.
T Consensus 265 ------------------------~~~~~~~~a~~------------------------~~l~~~~~~~~~~~~~~~~~~ 296 (389)
T 1gd9_A 265 ------------------------CPVTFIQYAAA------------------------KALKDERSWKAVEEMRKEYDR 296 (389)
T ss_dssp ------------------------SCCHHHHHHHH------------------------HHHTCHHHHHHHHHHHHHHHH
T ss_pred ------------------------CCCHHHHHHHH------------------------HHHhCCCcchHHHHHHHHHHH
Confidence 00111111111 34443221 146788889999
Q ss_pred HHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhH
Q 006746 473 LINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 473 L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~ 551 (632)
+.++|.+.|.++ |. +++.|. .+..+.+.+.+. | ++...+.+ |++++||.++.|..|..
T Consensus 297 ~~~~l~~~L~~~------g~---~~~~~~----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~----- 355 (389)
T 1gd9_A 297 RRKLVWKRLNEM------GL---PTVKPK----GAFYIFPRIRDT-G--LTSKKFSELMLKEARVAVVPGSAFGK----- 355 (389)
T ss_dssp HHHHHHHHHHHT------TC---CCCCCC----BTTEECCBCGGG-T--CCHHHHHHHHHHHTCEECEEGGGGCG-----
T ss_pred HHHHHHHHHHHc------CC---eecCCC----eeeEEEEeccCC-C--CCHHHHHHHHHHhCCEEEeCchhhCC-----
Confidence 999999999886 32 333332 233444455420 1 35555554 55589999987754331
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||+|++. +.+||+++++.|+++++.
T Consensus 356 -----------------------------~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 356 -----------------------------AGEGYVRISYAT--AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp -----------------------------GGTTBEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 023589999985 899999999999988764
No 84
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.88 E-value=1.2e-20 Score=205.61 Aligned_cols=165 Identities=12% Similarity=0.049 Sum_probs=129.8
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+......+++.|+++++++|++ +.| +++++|+|+.+++.++ +++||+|++ ...|++. ...+...++..|+++
T Consensus 52 y~~~~~~~~~~l~~~la~~~g~~---~~v-~~~sGt~A~~~~l~~~-~~~gd~vi~~~~~~~~~-~~~~~~~~~~~g~~~ 125 (421)
T 2ctz_A 52 YSRIMNPTVDVLEKRLAALEGGK---AAL-ATASGHAAQFLALTTL-AQAGDNIVSTPNLYGGT-FNQFKVTLKRLGIEV 125 (421)
T ss_dssp CBTTBCHHHHHHHHHHHHHHTCS---EEE-EESSHHHHHHHHHHHH-CCTTCEEEECSCCCHHH-HHHHHTHHHHTTCEE
T ss_pred ccCCCChHHHHHHHHHHHHhCCC---ceE-EecCHHHHHHHHHHHH-hCCCCEEEEeCCCchHH-HHHHHHHHHHcCCEE
Confidence 33334467789999999999986 245 4556799999999988 789999765 4677763 333334457789999
Q ss_pred EEE-eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccc-cCCCCCCCC
Q 006746 243 MSA-EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACA-LGPKDMDSF 319 (632)
Q Consensus 243 ~~v-~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq-~~g~~m~~l 319 (632)
+.+ +.+ ++++|+++|+++ +++|++++.+|+||...|++ |.++|+++|+++++|++| ..|....++
T Consensus 126 ~~~~~~~------d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~ 193 (421)
T 2ctz_A 126 RFTSREE------RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPL 193 (421)
T ss_dssp EECCTTC------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGG
T ss_pred EEECCCC------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCcc
Confidence 888 653 788999888753 58999999999999999999 999999999999999999 777522233
Q ss_pred CCCCCCCcEEEEccccccCCCCC-ceEEEEEe
Q 006746 320 GLSLVRPDFLICSFYQIFGENPS-GFGCLFVK 350 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~-G~G~L~Vr 350 (632)
.+++|++++|+||++|. |. ++|++++.
T Consensus 194 ---~~~~Di~~~s~~K~l~~-~g~~~G~~~~~ 221 (421)
T 2ctz_A 194 ---AWGAALVTHSLTKWVGG-HGAVIAGAIVD 221 (421)
T ss_dssp ---GGTCSEEEEETTTTTTC-SSCCCCEEEEE
T ss_pred ---ccCCeEEEECCcccccC-CCCcEEEEEEe
Confidence 35799999999998885 54 37888886
No 85
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.88 E-value=7.4e-21 Score=203.80 Aligned_cols=335 Identities=13% Similarity=0.103 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC------CCCCCCeEEE-eccccchhhHHHHHHHHhcCCEE
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY------PFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl------~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v 242 (632)
..+++.|+.+++++|++ .++|++|+|+|+.+++.++ .+++|++|++ ..+|++. . ..++..|+++
T Consensus 34 ~~~~~l~~~la~~~~~~----~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~-~----~~~~~~g~~~ 104 (390)
T 3b8x_A 34 EYVKQYETQFAKTFGSK----YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTT-Y----YPLQQYGLRV 104 (390)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHH-H----HHHHHTTCEE
T ss_pred hHHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHH-H----HHHHHcCCEE
Confidence 56679999999999986 4789999999999999998 5788999765 5677752 2 2345689999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.+++++.++.+|+++|+++|+++ +++|++++ .+|...|++ |.++|+++|+++++|++|+.|.. . +.
T Consensus 105 ~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~--~-~~ 172 (390)
T 3b8x_A 105 KFVDIDINTLNIDIESLKEAVTDS------TKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGAT--F-NN 172 (390)
T ss_dssp EEECBCTTTCSBCHHHHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCE--E-TT
T ss_pred EEEecCccccCcCHHHHHHHhCcC------CeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCE--E-CC
Confidence 999998545789999999988753 47888863 689999999 99999999999999999998752 2 33
Q ss_pred CCCCC--cEEEEcc---ccccCCCCCceEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhh
Q 006746 322 SLVRP--DFLICSF---YQIFGENPSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 322 s~~~~--Df~~~S~---hK~~G~~P~G~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
..++. |+.++|+ ||+.+ |.| |++++++ ...+.+++...+|............. .. ....+. .+..+
T Consensus 173 ~~~g~~~~~~~~s~~~~k~~~~--g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~-~~-~~~~~~---~~~~~ 244 (390)
T 3b8x_A 173 KCAGTFGLMGTFSSFYSNHIAT--MEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTG-VK-SDDQFE---ESFKF 244 (390)
T ss_dssp EETTSSSSEEEEECCTTSSSCS--SSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTE-EC-CSCTTT---SSSCB
T ss_pred cccccccceEEEEccCCCCCcc--CCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccccc-cc-cccccc---cccce
Confidence 33343 7777664 55544 556 8888887 44444443222221000000000000 00 000000 00000
Q ss_pred hhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHH
Q 006746 396 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~ 475 (632)
. ..|. +.++.++..+.++ .+|+ .++.+.+|.+.+.+
T Consensus 245 ~--~~g~------------~~~~~~~~aa~~l-------------------------~~l~-----~l~~~~~~~~~~~~ 280 (390)
T 3b8x_A 245 V--LPGY------------NVRPLEMSGAIGI-------------------------EQLK-----KLPRFISVRRKNAE 280 (390)
T ss_dssp C--SCCC------------BCCCCHHHHHHHH-------------------------HHHH-----HHHHHHHHHHHHHH
T ss_pred e--cccc------------ccCcCHHHHHHHH-------------------------HHHH-----HHHHHHHHHHHHHH
Confidence 0 0110 1123344434433 2233 24678889999999
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEE--EEccCCCCccCHHHHHHHHHhCCcEEcc---CccCCh-HHH
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAF--NVFDWKREKIEPVLVQKLADRENISLSY---GSLHHI-WFS 549 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaF--nv~~~~G~~i~~~~V~kla~~~gI~lr~---G~~c~~-~~~ 549 (632)
++.+.|.++ |.++++++. .+.+.+.| .+.+..| ++...+.+.+.++||.++. |.+|.. +..
T Consensus 281 ~l~~~L~~~--------~~~~~~~~~---~~~~~~~~~i~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~ 347 (390)
T 3b8x_A 281 YFLDKFKDH--------PYLDVQQET---GESSWFGFSFIIKKDSG--VIRKQLVENLNSAGIECRPIVTGNFLKNTDVL 347 (390)
T ss_dssp HHHHHHTTC--------SSEEECCCC---SBCCCCEEEEEECTTSC--CCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHH
T ss_pred HHHHHhcCC--------CCcccCCCC---CCcccEEEEEEecCcCc--ccHHHHHHHHHHCCCCeeeecCCchhhcchhh
Confidence 999999876 668887653 23444334 4442112 5677787777789999998 677765 432
Q ss_pred hHHHHhhhhh-hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHH
Q 006746 550 DKYQKEKDNV-LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 606 (632)
Q Consensus 550 ~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l 606 (632)
... ... +.+ |... .....+.||+|++.++|.|||+++++.|
T Consensus 348 ~~~----~~~~~~~---~~~~---------~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 348 KYF----DYTVHNN---VDNA---------EYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp TTC----EEEESSC---CHHH---------HHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred hcC----CCCCcCC---ChHH---------HHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 210 000 000 0000 0112358999999999999999999876
No 86
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.88 E-value=7.2e-21 Score=199.85 Aligned_cols=331 Identities=14% Similarity=0.060 Sum_probs=220.0
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
+..+||++...+..++.+++++.+.+... ...|+ .....+++++.+++++| +
T Consensus 7 ~~~id~~~~~~~~~~~~v~~a~~~~~~~~-------------------------~~~~~--~~~~~~~l~~~la~~~g-~ 58 (356)
T 1v72_A 7 PPALGFSSDNIAGASPEVAQALVKHSSGQ-------------------------AGPYG--TDELTAQVKRKFCEIFE-R 58 (356)
T ss_dssp CCCCBCSCGGGCCCCHHHHHHHHHTTSSC-------------------------CCSTT--CSHHHHHHHHHHHHHHT-S
T ss_pred CceEeeccCCccCCCHHHHHHHHhhccCc-------------------------ccccc--cchHHHHHHHHHHHHhC-C
Confidence 45678888877888899999987643110 00122 13567899999999999 4
Q ss_pred CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhc--CCEEEEEeccCCccccCHHHHHH-H
Q 006746 187 ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKR--GARVMSAEFSWPRLRINSEKLRK-M 262 (632)
Q Consensus 187 ~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~--G~~v~~v~~~~~~~~i~~~~l~~-~ 262 (632)
+..|+||+|+|+|+.+++.++ .++||+|++.. .|.+ .... ..++.. |++++.++.+ ++.+++++|++ +
T Consensus 59 --~~~v~~~~~gt~a~~~al~~~-~~~gd~vi~~~~~~~~-~~~~--~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~~ 130 (356)
T 1v72_A 59 --DVEVFLVPTGTAANALCLSAM-TPPWGNIYCHPASHIN-NDEC--GAPEFFSNGAKLMTVDGP--AAKLDIVRLRERT 130 (356)
T ss_dssp --CCEEEEESCHHHHHHHHHHTS-CCTTEEEEECTTSHHH-HSST--THHHHHTTSCEEEECCCG--GGCCCHHHHHHHT
T ss_pred --CCcEEEeCCccHHHHHHHHHh-cCCCCEEEEcCccchh-hhhc--hHHHHHhCCcEEEEecCC--CCeEcHHHHHHHh
Confidence 336999999999999999987 67899987654 4443 1211 012344 9999888875 46789999998 8
Q ss_pred HHhcC-cCCCceeEEEEeccCCCCcccc---chH-HHHHHhhCCcEEEEeccccC------CCCCCCCCCCCCCCcEEEE
Q 006746 263 VVSKG-KKKKQRGLFVFPLHSRMTGARY---PYL-WMRIAQENDWHILIDACALG------PKDMDSFGLSLVRPDFLIC 331 (632)
Q Consensus 263 i~~~~-~~~~~~~Lv~~~~~sn~TG~~~---pl~-i~~~a~~~g~~vlvDaaq~~------g~~m~~ldls~~~~Df~~~ 331 (632)
|++.. ....++++|++.+.+| ||..+ +++ |.++|+++|+++++|+++.. +.....+++ ..++|++++
T Consensus 131 i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~ 208 (356)
T 1v72_A 131 REKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTW-KAGVDALSF 208 (356)
T ss_dssp TSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTG-GGTCCEEEE
T ss_pred hhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhh-hhcCCEEEE
Confidence 86410 0112468999998766 99954 567 88999999999999998753 221111111 136899999
Q ss_pred ccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchh
Q 006746 332 SFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSI 411 (632)
Q Consensus 332 S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~ 411 (632)
|+||+ |. |.|.|+++.+++.++.+..... ..|+..-
T Consensus 209 s~sK~-g~-~~G~g~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~------ 244 (356)
T 1v72_A 209 GATKN-GV-LAAEAIVLFNTSLATEMSYRRK------------------------------------RAGHLSS------ 244 (356)
T ss_dssp CCGGG-TC-SSCEEEEESSGGGHHHHHHHHH------------------------------------HTTCCCS------
T ss_pred ecccC-CC-cCccEEEEECHHHHhhHHHHhh------------------------------------ccCchhh------
Confidence 99999 65 8899999988776544321100 0010000
Q ss_pred hhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCC
Q 006746 412 EMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEG 491 (632)
Q Consensus 412 ~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G 491 (632)
+...+.. .+++.+.+-.+..+.++.+.+.++|.+.|.++
T Consensus 245 ----------~~~~~~~------------------------~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~------- 283 (356)
T 1v72_A 245 ----------KMRFLSA------------------------QIDAYLTDDLWLRNARKANAAAQRLAQGLEGL------- 283 (356)
T ss_dssp ----------STHHHHH------------------------HHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTC-------
T ss_pred ----------hHHHHHH------------------------HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhC-------
Confidence 0001110 23333333224556778889999999999876
Q ss_pred CCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccc
Q 006746 492 NALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKS 571 (632)
Q Consensus 492 ~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~ 571 (632)
+.++++.|. .+.++.+.+. .+.+++| .++||.++.|.+
T Consensus 284 -~g~~~~~~~----~~~~~~~~~~--------~~~~~~l-~~~gi~v~~g~~---------------------------- 321 (356)
T 1v72_A 284 -GGVEVLGGT----EANILFCRLD--------SAMIDAL-LKAGFGFYHDRW---------------------------- 321 (356)
T ss_dssp -TTEEEESCC----CSSEEEEEEC--------HHHHHHH-HHTTCBCBCSSS----------------------------
T ss_pred -CCcEEccCC----CccEEEEEcC--------HHHHHHH-HhcCeEEecccc----------------------------
Confidence 568887652 4566666543 2344444 567998876520
Q ss_pred cccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 572 DNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 572 ~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+.||+|+++.+|.+|++++++.|+++++.
T Consensus 322 ----------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 322 ----------GPNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp ----------STTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred ----------CCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 1358999999999999999999999998754
No 87
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.88 E-value=1.3e-21 Score=212.04 Aligned_cols=165 Identities=12% Similarity=0.137 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...++.|++|++++|++ ..|+|+ ++++|+.+++. + +++||+|++. ..|++ ....+...++..|++++.++.+
T Consensus 67 p~~~~l~~~la~~~g~~---~~i~~~-sG~~ai~~~~~-l-~~~gd~Vl~~~~~y~~-~~~~~~~~~~~~G~~v~~v~~~ 139 (403)
T 3cog_A 67 PTRNCLEKAVAALDGAK---YCLAFA-SGLAATVTITH-L-LKAGDQIICMDDVYGG-TNRYFRQVASEFGLKISFVDCS 139 (403)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEES-CHHHHHHHHHT-T-SCTTCEEEEESSCCHH-HHHHHHHTGGGGTCEEEEECTT
T ss_pred chHHHHHHHHHHHhCCC---cEEEEC-CHHHHHHHHHH-H-hCCCCEEEEeCCCcch-HHHHHHHHHHHcCCEEEEECCC
Confidence 34568999999999986 256666 55799999998 7 7899997755 56664 3443455567889999998764
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCC-cEEEEeccccCCCCCCCCCCCCCCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEND-WHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g-~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
+.++|+++|+++ ++++.+.+.+|+||..+|++ |+++|+++| +++++|.++..+....+++ +++
T Consensus 140 ------d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~---~~~ 204 (403)
T 3cog_A 140 ------KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLA---LGA 204 (403)
T ss_dssp ------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTT---TTC
T ss_pred ------CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccc---cCC
Confidence 678898888653 58999999999999999999 999999999 9999999998874213554 578
Q ss_pred cEEEEccccccCCCCCce--EEEEEeC-CCcccc
Q 006746 327 DFLICSFYQIFGENPSGF--GCLFVKK-STVPIL 357 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~--G~L~Vr~-~~~~~L 357 (632)
|+++.|++|++|. |.|+ |++++++ +.++.+
T Consensus 205 div~~S~sK~~~g-~~~~~~G~v~~~~~~l~~~l 237 (403)
T 3cog_A 205 DISMYSATKYMNG-HSDVVMGLVSVNCESLHNRL 237 (403)
T ss_dssp SEEEEETTTTTTC-SSCCCCEEEEECCHHHHHHH
T ss_pred eEEEEcChhhccC-CCCCeEEEEEECcHHHHHHH
Confidence 9999999998875 7774 9998864 444433
No 88
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.88 E-value=7.3e-21 Score=202.09 Aligned_cols=304 Identities=9% Similarity=0.035 Sum_probs=204.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.++.+++++.+++.+|.+.+...|+||+|+|+|+++++.++ +++||+|++.. .|++ ....++..|++++.+++
T Consensus 62 ~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~-----~~~~~~~~g~~~~~~~~ 135 (383)
T 3kax_A 62 ENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAF-TKENESVLVQPPIYPP-----FFEMVTTNNRQLCVSPL 135 (383)
T ss_dssp TTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH-CCTTCEEEECSSCCHH-----HHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh-CCCCCEEEEcCCCcHH-----HHHHHHHcCCEEEeccc
Confidence 36677888999999893322337999999999999999998 78999987654 4543 23456778999999988
Q ss_pred cCC--ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEeccccCCCC--CCCC
Q 006746 248 SWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACALGPKD--MDSF 319 (632)
Q Consensus 248 ~~~--~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq~~g~~--m~~l 319 (632)
++. +..+++++|+++|+++ ++++++++.+|+||..+|.+ + +++|+++|+++++|.++..... ....
T Consensus 136 ~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 209 (383)
T 3kax_A 136 QKQNDTYAIDFEHLEKQFQQG------VKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHT 209 (383)
T ss_dssp EEETTEEECCHHHHHHHHTTT------CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCC
T ss_pred eecCCcEEEcHHHHHHHhCcC------CeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCce
Confidence 632 2348999999999543 48899999999999999866 5 4559999999999999875210 0122
Q ss_pred CCCCC-----CCcEEEEccccccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 320 GLSLV-----RPDFLICSFYQIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 320 dls~~-----~~Df~~~S~hK~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
.+..+ +.++++.|++|.+|.+..++|++++. ++.++.+.....
T Consensus 210 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~------------------------------- 258 (383)
T 3kax_A 210 PFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQY------------------------------- 258 (383)
T ss_dssp CGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHH-------------------------------
T ss_pred eHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHh-------------------------------
Confidence 22222 45599999999988322236777763 444333321100
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
..+ .++++.+...++. .+|+...+ .++.+.++.+.+
T Consensus 259 -----~~~--------------~~~~~~~~~~a~~------------------------~~l~~~~~-~~~~~~~~~~~~ 294 (383)
T 3kax_A 259 -----RQG--------------FHGLNIFAYTAMQ------------------------SAYTECND-WLNEIRFYIEDN 294 (383)
T ss_dssp -----HTT--------------CCCCCHHHHHHHH------------------------HHTTTCHH-HHHHHHHHHHHH
T ss_pred -----hcc--------------cCCCCHHHHHHHH------------------------HHHHhhHH-HHHHHHHHHHHH
Confidence 000 0112222222222 34433211 267788899999
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEE-EEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALA-FNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~iva-Fnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~ 551 (632)
.+++.+.|.++ .|.++++.|. ++.+. +.+... | ++...+.+ |++++||.++.|..|..
T Consensus 295 ~~~l~~~l~~~-------~~~~~~~~~~-----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~----- 354 (383)
T 3kax_A 295 AKFACEYIKDH-------IPTLSVMKPE-----GSFLLWIDCSAL-N--LSQDERTKLLEEKGKIIVEPGEKYGL----- 354 (383)
T ss_dssp HHHHHHHHHHH-------CTTCEECCCS-----BSSEEEEECGGG-C--CCHHHHHHHHHHTSCEECEESGGGCT-----
T ss_pred HHHHHHHHHhh-------CCCceEecCC-----ceEEEEEEcccc-C--CCHHHHHHHHHhhCCEEeECchhhcC-----
Confidence 99999999883 1567777653 34443 555531 1 45556655 54589999998854432
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
.+.+.||+|++ ++.+||+++++.|++++
T Consensus 355 -----------------------------~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 355 -----------------------------GGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp -----------------------------TCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 13469999988 59999999999998876
No 89
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.87 E-value=5.1e-21 Score=203.10 Aligned_cols=294 Identities=8% Similarity=-0.010 Sum_probs=201.7
Q ss_pred HHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.++++++ ++++ .|+||+|+|+|+++++.++ .++||+|++ ...|++ ....++..|++++.++
T Consensus 62 ~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~-----~~~~~~~~g~~~~~~~ 133 (377)
T 3fdb_A 62 LLSQATAEFYADRYGYQARPE--WIFPIPDVVRGLYIAIDHF-TPAQSKVIVPTPAYPP-----FFHLLSATQREGIFID 133 (377)
T ss_dssp CHHHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SCTTCCEEEEESCCTH-----HHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCHH--HEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCcHh-----HHHHHHHcCCEEEEcc
Confidence 56777777766 6554 7999999999999999998 688999765 446654 1344567899999999
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC----C-CCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----P-KDMD 317 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~----g-~~m~ 317 (632)
.+. + +++++|++++++++ +++++++.+|+||..+|.+ |+++|+++|+++++|.++.. | . .
T Consensus 134 ~~~-~--~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~--~ 202 (377)
T 3fdb_A 134 ATG-G--INLHDVEKGFQAGA------RSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQH--T 202 (377)
T ss_dssp CTT-S--CCHHHHHHHHHTTC------CEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCC--C
T ss_pred CCC-C--CCHHHHHHHhccCC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCC--C
Confidence 973 3 99999999998754 7999999999999999754 55669999999999999875 2 1 1
Q ss_pred CCCCC---CCCCcEEEEccccccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 318 SFGLS---LVRPDFLICSFYQIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 318 ~ldls---~~~~Df~~~S~hK~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
..++. ..+.++++.|++|.+|.+...+|++++. ++.++.+..... +
T Consensus 203 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-------------~----------------- 252 (377)
T 3fdb_A 203 VAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSP-------------V----------------- 252 (377)
T ss_dssp CGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCH-------------H-----------------
T ss_pred cccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHH-------------h-----------------
Confidence 22222 2344599999999998422236777763 344333321100 0
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.. ++.+.+...++. ++|+... ..++.+.++.+.+
T Consensus 253 -----~~----------------~~~~~~~~~a~~------------------------~~l~~~~-~~~~~~~~~~~~~ 286 (377)
T 3fdb_A 253 -----IK----------------DGASTLGLIAAE------------------------AAYRYGT-DFLNQEVAYLKNN 286 (377)
T ss_dssp -----HH----------------CCCCHHHHHHHH------------------------HHHHHCH-HHHHHHHHHHHHH
T ss_pred -----hc----------------CCCCHHHHHHHH------------------------HHHhccH-HHHHHHHHHHHHH
Confidence 00 011111222221 4444322 2367888899999
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
.++|.+.|.++ .|.++++.|. .+.++.+.+.+. + ++.+.++++++++||.++.|..|...
T Consensus 287 ~~~l~~~L~~~-------~~~~~~~~~~----~~~~~~~~~~~~-~--~~~~~~~~l~~~~gi~v~~g~~~~~~------ 346 (377)
T 3fdb_A 287 HDFLLHEIPKR-------IPGAKITPMQ----ATYLMWIDFRDT-T--IEGSPSEFFIEKAKVAMNDGAWFGED------ 346 (377)
T ss_dssp HHHHHHHHHHH-------STTCEECCCS----BCSEEEEECTTS-C--CCSCHHHHHHHHHCEECEEGGGGCGG------
T ss_pred HHHHHHHHHhh-------CCCceEecCC----eeEEEEEECccc-C--CCHHHHHHHHHhCCEEecCChhccCC------
Confidence 99999999883 2667777653 233445666542 1 34456778888889999988655431
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+.||+|++ ++.|||+++++.|+++++.
T Consensus 347 ----------------------------~~~~~Ris~~--~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 347 ----------------------------GTGFCRLNFA--TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp ----------------------------GTTEEEEECC--SCHHHHHHHHHHHHHHHTT
T ss_pred ----------------------------CCCEEEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence 2469999998 4899999999999988753
No 90
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.87 E-value=9.1e-21 Score=205.19 Aligned_cols=348 Identities=12% Similarity=0.026 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
++.+++++.+++++|++ .++|++|+|+|+.+++.++.+++||+|++ ...|++ . ...++..|++++.++++
T Consensus 42 ~l~~~l~~~la~~~g~~----~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~~~~~ 112 (418)
T 2c81_A 42 SMERKFAKAFADFNGVP----YCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIA-T----ATAVLNVNALPVFVDVE 112 (418)
T ss_dssp CHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHh-H----HHHHHHcCCEEEEEecC
Confidence 56789999999999986 47889999999999999997789999765 457765 2 23456789999999987
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
..++.+|+++|+++|+++ +++|++ +|+||...|++ |.++|+++|+++++|+++..+.....-.+..+ .|
T Consensus 113 ~~~~~~d~~~l~~~i~~~------~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~ 182 (418)
T 2c81_A 113 ADTYCIDPQLIKSAITDK------TKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTI-GD 182 (418)
T ss_dssp TTTCSBCHHHHGGGCCTT------EEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SS
T ss_pred CCCCCcCHHHHHHhhCCC------CeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccc-cc
Confidence 446789999998888653 477765 45899999999 99999999999999999988751010011112 36
Q ss_pred EEEEcc--ccccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh--ccc
Q 006746 328 FLICSF--YQIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV--AAT 402 (632)
Q Consensus 328 f~~~S~--hK~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e--~gt 402 (632)
+.+.|+ ||++| +...|+++.+ ++.++.+.+...+|.... .. .+... ..+ + .++
T Consensus 183 ~~~~s~s~~K~~~--~g~~g~~~~~~~~l~~~~~~~~~~~~~~~--~~--~~~~~-------------~~~---~~~~~~ 240 (418)
T 2c81_A 183 IGAFSCQQGKVLT--AGEGGIIVTKNPRLFELIQQLRADSRVYC--DD--SSELM-------------HGD---MQLVKK 240 (418)
T ss_dssp EEEEECCTTSSSC--SSSCEEEEESCHHHHHHHHHHHBTTEEEC--SC--GGGCC-------------TTC---BSEEEC
T ss_pred eEEEeccCCcccC--CCCeEEEEECCHHHHHHHHHHHHhCcccc--cc--ccccc-------------cch---hhcccc
Confidence 666766 99999 5345666664 355555543222222110 00 00000 000 0 111
Q ss_pred cCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Q 006746 403 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 482 (632)
Q Consensus 403 ~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~ 482 (632)
..+.+.- ... ..+ ..++......+++.+.+|.+.+.++|.+.|.
T Consensus 241 ~~~~g~~---------~~~---~~~------------------------~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~ 284 (418)
T 2c81_A 241 GDIQGSN---------YCL---SEF------------------------QSAILLDQLQELDDKNAIREKNAMFLNDALS 284 (418)
T ss_dssp CSSCCCB---------CCC---CHH------------------------HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCcC---------CCc---CHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111100 000 001 1333333333678889999999999999998
Q ss_pred ccCCCCCCCCCcEEEECCCCC-CCCC-cEEEEEEccCCCCccCHHHHHHHHHhC-CcE---EccCccCChHHHhHHHHh-
Q 006746 483 KLQHPNTEGNALVKIYGPKIR-FDRG-PALAFNVFDWKREKIEPVLVQKLADRE-NIS---LSYGSLHHIWFSDKYQKE- 555 (632)
Q Consensus 483 ~l~h~~~~G~p~v~Iygp~~~-~~rg-~ivaFnv~~~~G~~i~~~~V~kla~~~-gI~---lr~G~~c~~~~~~~~~~~- 555 (632)
++ |.++++++... .... .+++|.+.+.....++...+.+.+.++ ||. ++.|+.|.... ..+...
T Consensus 285 ~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~-~~~~~~~ 355 (418)
T 2c81_A 285 KI--------DGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKN-PLFCPWT 355 (418)
T ss_dssp TS--------TTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGC-TTCCGGG
T ss_pred cC--------CCcccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccC-chhcccc
Confidence 76 67888865321 1123 477787763100115666676666566 999 99887442110 000000
Q ss_pred hhh-------hhhhh--hccccccccccccccCCCCCcEEEEccCCCC-CHHHHHHHHHHHHHhhhh
Q 006746 556 KDN-------VLEKT--DREAKSKSDNNRKDKANLGITVVTASLGYLA-NFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 556 ~~~-------~l~~~--~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~-t~eDV~rlv~~l~~~l~~ 612 (632)
... .++.. ..+... .....++||+|++.++ |.|||+++++.|++++..
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 356 KNRYLKSVRKTEAYWRGLHYPVS---------ERASGQSIVIHHAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp CTTSCHHHHCCHHHHHTCCCHHH---------HHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccCCChHH---------HHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence 000 00000 000000 0011369999999999 999999999999998753
No 91
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.87 E-value=3.4e-21 Score=207.93 Aligned_cols=317 Identities=11% Similarity=0.048 Sum_probs=205.7
Q ss_pred HHHHHHHHHc----CCCCCCc-cEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMDFL----NISENDY-GMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey-~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+.|+.+++++ |.+.+.. .|+||+|+|+|+.+++.++ .++||+|++ ...|++ . ...++..|++++.++.
T Consensus 66 ~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~-~~~gd~Vl~~~~~y~~-~----~~~~~~~g~~~~~v~~ 139 (411)
T 2o0r_A 66 PLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGL-VEPGSEVLLIEPFYDS-Y----SPVVAMAGAHRVTVPL 139 (411)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCcHh-H----HHHHHHcCCEEEEeec
Confidence 4566666655 7543333 6999999999999999998 688999765 456764 2 2345678999999998
Q ss_pred cCC--ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccCCC----CCC
Q 006746 248 SWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALGPK----DMD 317 (632)
Q Consensus 248 ~~~--~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~g~----~m~ 317 (632)
+.. ++.+++++|+++|+++ ++++++++.+|+||..+|. + |+++|+++|+++++|.++.... ...
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 213 (411)
T 2o0r_A 140 VPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHL 213 (411)
T ss_dssp EEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCC
T ss_pred cccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCc
Confidence 632 3568999999988643 5899999999999999985 6 8899999999999999987532 001
Q ss_pred CC-CCC-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 318 SF-GLS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 318 ~l-dls-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
++ .+. ..+.|+++.|++|.+| +.| +|+++++++.++.+....
T Consensus 214 ~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~-------------------------------- 259 (411)
T 2o0r_A 214 PLAGFDGMAERTITISSAAKMFN--CTGWKIGWACGPAELIAGVRAAK-------------------------------- 259 (411)
T ss_dssp CGGGSTTTGGGEEEEEEHHHHTT--CTTTCEEEEECCHHHHHHHHHHH--------------------------------
T ss_pred ChhhccCCCCCEEEEeechhhcC--CccceEEEEeeCHHHHHHHHHHH--------------------------------
Confidence 11 121 2578999999999999 558 899998876654332210
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.. ...+ .+.+...++. .+|+.. ...++.+.++.+.+
T Consensus 260 ~~---~~~~----------------~~~~~~~a~~------------------------~~l~~~-~~~~~~~~~~~~~~ 295 (411)
T 2o0r_A 260 QY---LSYV----------------GGAPFQPAVA------------------------LALDTE-DAWVAALRNSLRAR 295 (411)
T ss_dssp HH---HTSC----------------CCTTHHHHHH------------------------HHHHHC-HHHHHHHHHHHHHH
T ss_pred hh---ccCC----------------CChHHHHHHH------------------------HHHhCC-hHHHHHHHHHHHHH
Confidence 00 0000 0111112222 455433 22467888999999
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHH-HHHHHhCCcEEccCccCChHHHhHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLV-QKLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V-~kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
.++|.+.|.++ | ++++.|. .+..+.+.+.+..+ ++...+ +++++++||.++.|..|........
T Consensus 296 ~~~l~~~L~~~------g---~~~~~~~----~g~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~ 360 (411)
T 2o0r_A 296 RDRLAAGLTEI------G---FAVHDSY----GTYFLCADPRPLGY--DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQA 360 (411)
T ss_dssp HHHHHHHHHHH------T---CEECCCC----BSSEEEEECGGGTC--CCHHHHHHHHHHHHSEECEEGGGGSCCC----
T ss_pred HHHHHHHHHHc------C---CEecCCC----eeEEEEEecCCCCC--CCHHHHHHHHHHhCCEEEcChhhhCCCccccc
Confidence 99999999887 3 4555542 34577777765211 344444 4566778999988765532100000
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhcccccccce
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVEKARWR 621 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f~~~~~~~ 621 (632)
..+ ...+.+.||+|++ ++.+||+++++.|+++++.. -.+-+|-
T Consensus 361 -----~~~------------------~~~~~~~iRis~~--~~~e~i~~~~~~l~~~~~~~-~~~~~~~ 403 (411)
T 2o0r_A 361 -----SQQ------------------ADVWNHLVRFTFC--KRDDTLDEAIRRLSVLAERP-ATGVPRG 403 (411)
T ss_dssp ---------------------------CCGGGCEEEECC--SCHHHHHHHHHHHGGGGC----------
T ss_pred -----ccc------------------ccCCCCeEEEEec--CCHHHHHHHHHHHHHHHhcc-CcCCCcc
Confidence 000 0113468999987 48999999999999987653 3344553
No 92
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.87 E-value=8.9e-21 Score=202.66 Aligned_cols=334 Identities=11% Similarity=0.052 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+.+.|++|++++|++ +.|++| |+|+|+++++.++..++||+|++ ...|++ . ...++..|++++.++++
T Consensus 38 ~~~~~l~~~la~~~~~~---~~i~~~-sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~-~----~~~~~~~g~~~~~v~~~ 108 (388)
T 1b9h_A 38 DEVNSFEREFAAHHGAA---HALAVT-NGTHALELALQVMGVGPGTEVIVPAFTFIS-S----SQAAQRLGAVTVPVDVD 108 (388)
T ss_dssp SHHHHHHHHHHHHTTCS---EEEEES-CHHHHHHHHHHHTTCCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeC-CHHHHHHHHHHHcCCCCcCEEEECCCccHH-H----HHHHHHcCCEEEEEecC
Confidence 45678999999999986 256555 55999999999987788999765 567775 2 23456789999999998
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC-C
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR-P 326 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~-~ 326 (632)
..++.+|+++|+++|+++ +++|+ .+|.||...|++ |.++|+++|+++++|++|+.|......++..++ +
T Consensus 109 ~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i 179 (388)
T 1b9h_A 109 AATYNLDPEAVAAAVTPR------TKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELDSI 179 (388)
T ss_dssp TTTCCBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSSSC
T ss_pred CCcCCCCHHHHHHhcCcC------ceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeecccccce
Confidence 545779999999988653 46666 678899999999 999999999999999999876521113344444 5
Q ss_pred cEEEEccccccCCCCCceEEEEEeCCCc---cccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcccc
Q 006746 327 DFLICSFYQIFGENPSGFGCLFVKKSTV---PILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 403 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G~G~L~Vr~~~~---~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~ 403 (632)
++..+|.||+++. + ..|+++.+++.+ +.+.....+|... . .| .++ ....|+.
T Consensus 180 ~~~S~s~~K~l~g-~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~--------~~~---------~~~~g~~ 234 (388)
T 1b9h_A 180 ATFSFQNGKLMTA-G-EGGAVVFPDGETEKYETAFLRHSCGRPR-----D-DR--------RYF---------HKIAGSN 234 (388)
T ss_dssp EEEECCTTSSSCS-S-SCEEEEECTTCHHHHHHHHHHTBTTCCT-----T-CS--------SCC---------CCSCCCB
T ss_pred EEEEccCCCcccC-C-CeEEEEECCHHHHHHHHHHHHHhCCCCc-----c-Cc--------cce---------eeccccc
Confidence 5566666787762 4 458888777633 3332111111100 0 00 000 0001221
Q ss_pred CCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Q 006746 404 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK 483 (632)
Q Consensus 404 ~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~ 483 (632)
.-. +...+..+. .+++ -++...++.+.+.+++.+.|.+
T Consensus 235 ~~~-------------~~~~~a~~~------------------------~~~~-----~l~~~~~~~~~~~~~l~~~L~~ 272 (388)
T 1b9h_A 235 MRL-------------NEFSASVLR------------------------AQLA-----RLDEQIAVRDERWTLLSRLLGA 272 (388)
T ss_dssp CBC-------------BHHHHHHHH------------------------HHHT-----THHHHHHHHHHHHHHHHHHHHT
T ss_pred CCc-------------CHHHHHHHH------------------------HHHH-----HHHHHHHHHHHHHHHHHHHhcc
Confidence 000 000011111 2222 2455667788889999999988
Q ss_pred cCCCCCCCCCcEEEECCCCC--CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh------
Q 006746 484 LQHPNTEGNALVKIYGPKIR--FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE------ 555 (632)
Q Consensus 484 l~h~~~~G~p~v~Iygp~~~--~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~------ 555 (632)
+ |.++++++... ...+.++.|.+.+..+ .+...+.+.+.++||.++.|+..... ...+...
T Consensus 273 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~-~~~~~~~~~~~~~ 341 (388)
T 1b9h_A 273 I--------DGVVPQGGDVRADRNSHYMAMFRIPGLTE--ERRNALVDRLVEAGLPAFAAFRAIYR-TDAFWELGAPDES 341 (388)
T ss_dssp S--------TTCEECCCCTTCCBCCCSEEEEECTTCCH--HHHHHHHHHHHHTTCCEEECCCCGGG-SHHHHHSSCCSSC
T ss_pred C--------CCccccCCCcCCCccceEEEEEEeCCcCc--ccHHHHHHHHHHCCCCcccccCcccc-ChHhHhcCCCccc
Confidence 6 55778775321 1235788888765210 13455655556689999987532110 0001000
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCC-CHHHHHHHHHHHHHhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLA-NFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~-t~eDV~rlv~~l~~~l~ 611 (632)
...... .|... .....+.||+|++..+ |.|||+++++.|+++++
T Consensus 342 ~~~~~~---~~~~~---------~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 342 VDAIAR---RCPNT---------DAISSDCVWLHHRVLLAGEPELHATAEIIADAVA 386 (388)
T ss_dssp HHHHHH---TCHHH---------HHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred cccccc---CCHHH---------HHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHh
Confidence 000000 00000 0012358999999999 99999999999999875
No 93
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.87 E-value=5e-21 Score=208.28 Aligned_cols=303 Identities=10% Similarity=0.038 Sum_probs=205.6
Q ss_pred HHHHHHHHHHcC-----CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 173 SAMKKRIMDFLN-----ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 173 ~~~R~~ia~~l~-----a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.+.|+.++++++ ++++ .|+||+|+|+|+.+++..+ .++||+|++. ..|++ ....++..|++++.++
T Consensus 99 ~~lr~~la~~~~~~~~~~~~~--~v~~t~g~t~al~~~~~~l-~~~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~~~ 170 (427)
T 3dyd_A 99 LSSREEIASYYHCPEAPLEAK--DVILTSGCSQAIDLCLAVL-ANPGQNILVPRPGFSL-----YKTLAESMGIEVKLYN 170 (427)
T ss_dssp HHHHHHHHHHHCBTTBCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTH-----HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhhcCCCCChH--HEEEecCcHHHHHHHHHHh-cCCCCEEEEcCCCchh-----HHHHHHHcCCEEEEEe
Confidence 478999999999 6654 7999999999999999998 5789997654 45542 2345677899999998
Q ss_pred ccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCCCC
Q 006746 247 FSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMD 317 (632)
Q Consensus 247 ~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~m~ 317 (632)
.+. .+..+++++|++.++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++.. +. .
T Consensus 171 ~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~--~ 242 (427)
T 3dyd_A 171 LLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDC--K 242 (427)
T ss_dssp EEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSC--C
T ss_pred cccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCC--c
Confidence 863 24468999998887653 588999999999999999 88 89999999999999998765 22 1
Q ss_pred CCCCCCCCCc---EEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 318 SFGLSLVRPD---FLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 318 ~ldls~~~~D---f~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
...+..+..| +++.|++|.||. .| +|++++++... .+.+....
T Consensus 243 ~~~~~~~~~~~~vi~~~S~sK~~~~--~G~riG~~~~~~~~~-~~~~~i~~----------------------------- 290 (427)
T 3dyd_A 243 YEPLATLSTDVPILSCGGLAKRWLV--PGWRLGWILIHDRRD-IFGNEIRD----------------------------- 290 (427)
T ss_dssp CCCGGGGCSSCCEEEEEESTTTSSC--GGGCCEEEEEECSTT-SSHHHHHH-----------------------------
T ss_pred CccHHHhCCCCcEEEEeeccccCCC--cCcceEEEEecCcch-hhHHHHHH-----------------------------
Confidence 2233333333 677899999884 36 79999886421 11100000
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRC 472 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~ 472 (632)
.+...... ..+++.....++. ++|+......++.+.++++.
T Consensus 291 -~l~~~~~~--------------~~~~~~~~~~a~~------------------------~~L~~~~~~~~~~~~~~~~~ 331 (427)
T 3dyd_A 291 -GLVKLSQR--------------ILGPCTIVQGALK------------------------SILCRTPGEFYHNTLSFLKS 331 (427)
T ss_dssp -HHHHHHHH--------------HCCSCHHHHHHHH------------------------HHHHHSCHHHHHHHHHHHHH
T ss_pred -HHHHHHhc--------------cCCCCHHHHHHHH------------------------HHHHhcCHHHHHHHHHHHHH
Confidence 00000000 0111222222222 44443223346778888999
Q ss_pred HHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccC-CCCccC-HHHHHHHHHhCCcEEccCccCChHHHh
Q 006746 473 LINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDW-KREKIE-PVLVQKLADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 473 L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~-~G~~i~-~~~V~kla~~~gI~lr~G~~c~~~~~~ 550 (632)
+.++|++.|.++ |.++++.|. .+..+.+.+... -....+ .+.++++++++||.++.|..|.
T Consensus 332 ~~~~l~~~L~~~--------~g~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~----- 394 (427)
T 3dyd_A 332 NADLCYGALAAI--------PGLRPVRPS----GAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE----- 394 (427)
T ss_dssp HHHHHHHHHHHS--------TTEEEECCS----BTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT-----
T ss_pred HHHHHHHHHhcC--------CCceecCCC----eeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC-----
Confidence 999999999987 668877663 344555555421 000123 3455677778899998764322
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.+|+|++ ++.++|+++++.|++++..
T Consensus 395 -------------------------------~~~~iRis~~--~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 395 -------------------------------YPNFIRVVIT--VPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp -------------------------------CTTEEEEESC--SCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCeEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence 1359999987 7999999999999998754
No 94
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.87 E-value=3.8e-21 Score=204.26 Aligned_cols=325 Identities=12% Similarity=0.084 Sum_probs=215.0
Q ss_pred CCceEeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcC-
Q 006746 107 SNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLN- 184 (632)
Q Consensus 107 ~~~vyLD~ag~gl-~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~- 184 (632)
++.++|+.+...+ .|+.+.+++.+.+.... ..|+.. .-..+.|+.|+++++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-------------------------~~y~~~--~~~~~l~~~la~~~~~ 81 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-------------------------THYTDS--RGILELREKISELYKD 81 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTC-------------------------CSCCCT--TCCHHHHHHHHHHHHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCc-------------------------cCCCCC--CCCHHHHHHHHHHHHH
Confidence 4567888776654 47778887655332100 001100 112367777777764
Q ss_pred -----CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHH
Q 006746 185 -----ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEK 258 (632)
Q Consensus 185 -----a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~ 258 (632)
++++ .|++|+|+|+|+.+++.++ +++||+|++. ..|++ + ...++..|++++.++ +|.++
T Consensus 82 ~~g~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~--~---~~~~~~~g~~~~~v~-------~d~~~ 146 (370)
T 2z61_A 82 KYKADIIPD--NIIITGGSSLGLFFALSSI-IDDGDEVLIQNPCYPC--Y---KNFIRFLGAKPVFCD-------FTVES 146 (370)
T ss_dssp HSSCCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCTH--H---HHHHHHTTCEEEEEC-------SSHHH
T ss_pred HhCCCCChh--hEEECCChHHHHHHHHHHh-cCCCCEEEEeCCCchh--H---HHHHHHcCCEEEEeC-------CCHHH
Confidence 4443 7999999999999999998 7889997654 56664 2 334567899998876 57889
Q ss_pred HHHHHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCC-CCCCCC----CCCCcEEEEcc
Q 006746 259 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDM-DSFGLS----LVRPDFLICSF 333 (632)
Q Consensus 259 l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m-~~ldls----~~~~Df~~~S~ 333 (632)
|+++++++ ++++++++.+|+||..+|++|.++|+++|+++++|.++..+..- .+.++. ..+.|+++.|+
T Consensus 147 l~~~l~~~------~~~v~~~~p~nptG~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~ 220 (370)
T 2z61_A 147 LEEALSDK------TKAIIINSPSNPLGEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGF 220 (370)
T ss_dssp HHHHCCSS------EEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEES
T ss_pred HHHhcccC------ceEEEEcCCCCCcCcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecC
Confidence 98888643 58899999999999999999889999999999999998764310 012222 34679999999
Q ss_pred ccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchh
Q 006746 334 YQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSI 411 (632)
Q Consensus 334 hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~ 411 (632)
+|++| +.| +|+++++++.++.+.....+ | .
T Consensus 221 sK~~~--~~G~r~G~~~~~~~~~~~~~~~~~~------------~-----------------------~----------- 252 (370)
T 2z61_A 221 SKLYA--MTGWRIGYVISNDEIIEAILKLQQN------------L-----------------------F----------- 252 (370)
T ss_dssp TTTTT--CGGGCCEEEECCHHHHHHHHHHHHH------------H-----------------------T-----------
T ss_pred hhccC--CccceEEEEEECHHHHHHHHHHHhh------------c-----------------------c-----------
Confidence 99999 558 89999888665444321000 0 0
Q ss_pred hhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCC
Q 006746 412 EMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEG 491 (632)
Q Consensus 412 ~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G 491 (632)
++.+.+...++. ++|+.+....++.+.++.+.+.+++.+.|.++ |
T Consensus 253 -----~~~~~~~~~a~~------------------------~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g 297 (370)
T 2z61_A 253 -----ISAPTISQYAAL------------------------KAFEKETEREINSMIKEFDRRRRLVLKYVKDF------G 297 (370)
T ss_dssp -----SSSCHHHHHHHG------------------------GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT------T
T ss_pred -----cCCCHHHHHHHH------------------------HHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc------C
Confidence 011111122222 44543112346778888999999999999886 3
Q ss_pred CCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHH-HHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccc
Q 006746 492 NALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLV-QKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSK 570 (632)
Q Consensus 492 ~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V-~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 570 (632)
++++.|. .+..+.+.+.+ +...+ +++++++||.++.|..|..
T Consensus 298 ---~~~~~~~----~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~f~~------------------------ 340 (370)
T 2z61_A 298 ---WEVNNPI----GAYYVFPNIGE------DGREFAYKLLKEKFVALTPGIGFGS------------------------ 340 (370)
T ss_dssp ---CBCCCCC----BTTEECCBCSS------CHHHHHHHHHHHHCEECEEGGGGCG------------------------
T ss_pred ---CeecCCC----cceEEEEecCC------CHHHHHHHHHHhCCEEEeCchhhCC------------------------
Confidence 2333332 23333334432 34444 4555578999987744321
Q ss_pred ccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 571 SDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 571 ~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+.+.||+|++ ++.+||+++++.|+++++
T Consensus 341 ----------~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 341 ----------KGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp ----------GGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred ----------CCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 02358999999 799999999999998864
No 95
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.87 E-value=1.8e-20 Score=203.14 Aligned_cols=306 Identities=9% Similarity=0.036 Sum_probs=206.0
Q ss_pred HHHHHHHHHc----CCCCCCc-cEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMDFL----NISENDY-GMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey-~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+.|+.+++++ |.+.+.. .|+||+|+|+|+.+++.++ .++||+|++. ..|++ . ...++..|++++.++.
T Consensus 81 ~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~~~~ 154 (429)
T 1yiz_A 81 RLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGH-VDEGDEVIIIEPFFDC-Y----EPMVKAAGGIPRFIPL 154 (429)
T ss_dssp HHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEEeC
Confidence 5566666664 7543333 6999999999999999998 6789997654 46664 2 2345678999999998
Q ss_pred cCC---------ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC--
Q 006746 248 SWP---------RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG-- 312 (632)
Q Consensus 248 ~~~---------~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~-- 312 (632)
+.. ++.+++++|++++++ +++++++++.+|+||..+| ++ |+++|+++|+++++|.++..
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (429)
T 1yiz_A 155 KPNKTGGTISSADWVLDNNELEALFNE------KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMV 228 (429)
T ss_dssp BCCCSSSSEEGGGCBCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred CcccccccccccCcccCHHHHHHHhcc------CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccc
Confidence 743 346899999998864 3588999999999999996 77 89999999999999999874
Q ss_pred --CCCCCCC-CCC-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCC
Q 006746 313 --PKDMDSF-GLS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 313 --g~~m~~l-dls-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
+....++ .+. ..+.|+++.|++|.|| +.| +|++++++++++.+......
T Consensus 229 ~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~~----------------------- 283 (429)
T 1yiz_A 229 FEPFEHIRICTLPGMWERTITIGSAGKTFS--LTGWKIGWAYGPEALLKNLQMVHQN----------------------- 283 (429)
T ss_dssp CTTSCCCCGGGSTTTGGGEEEEEEHHHHHT--CGGGCCEEEESCHHHHHHHHHHHHT-----------------------
T ss_pred cCCCCCcChhhccCCcCceEEEecchhccC--CCCcceEEEEeCHHHHHHHHHHHhh-----------------------
Confidence 2111122 222 4578999999999999 668 89999987765444221000
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHH-----HH-h
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ-----VD-S 460 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~-----~~-~ 460 (632)
. . .+.+.+...++. ++|+. .. .
T Consensus 284 --------------~--~------------~~~~~~~~~a~~------------------------~~l~~~~~~~~~~~ 311 (429)
T 1yiz_A 284 --------------C--V------------YTCATPIQEAIA------------------------VGFETELKRLKSPE 311 (429)
T ss_dssp --------------T--T------------CCCCHHHHHHHH------------------------HHHHHHHTTTTSTT
T ss_pred --------------c--c------------cCCChHHHHHHH------------------------HHHhcccccccchH
Confidence 0 0 001111112222 45544 10 1
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC--------CccCHHH-HHHHH
Q 006746 461 LGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR--------EKIEPVL-VQKLA 531 (632)
Q Consensus 461 ~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G--------~~i~~~~-V~kla 531 (632)
-.++.+.++.+.+.++|.+.|.++ | ++++.|. .+..+.+.+.+... ...+... +++++
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 378 (429)
T 1yiz_A 312 CYFNSISGELMAKRDYMASFLAEV------G---MNPTVPQ----GGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMT 378 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH------T---CEEEECS----BSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC------C---CcccCCC----cceEEEEEcccccccccccccccCCCHHHHHHHHH
Confidence 127788899999999999999987 4 3455442 35577777764210 0123344 45567
Q ss_pred HhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 532 DRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 532 ~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+++||.++.|..|..... ...+.+.||+|++ ++.+||+++++.|+++++
T Consensus 379 ~~~gv~v~~g~~f~~~~~-----------------------------~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 379 KSVGLQGIPPSAFYSEPN-----------------------------KHLGEDFVRYCFF--KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp HHTSEECBCGGGGSCGGG-----------------------------GGGTTTEEEEECC--SCHHHHHHHHHHHHHHSC
T ss_pred HhCCEEEeCchHhCCCcc-----------------------------cCCCCCeEEEEec--CCHHHHHHHHHHHHHhcc
Confidence 789999987743321100 0012469999998 489999999999999876
Q ss_pred h
Q 006746 612 A 612 (632)
Q Consensus 612 ~ 612 (632)
+
T Consensus 428 ~ 428 (429)
T 1yiz_A 428 S 428 (429)
T ss_dssp C
T ss_pred C
Confidence 4
No 96
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.87 E-value=1.4e-20 Score=203.12 Aligned_cols=168 Identities=8% Similarity=0.045 Sum_probs=137.1
Q ss_pred ccccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcC
Q 006746 161 QLLHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 161 ~~~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G 239 (632)
.+.|+.......++.|++|++++|++ .++|++|+|+|+++++.++ +++||+|++. ..|++ ....+....+..|
T Consensus 57 ~~~y~r~~~~~~~~l~~~la~~~g~~----~~~~~~sGt~A~~~al~~~-~~~gd~Vi~~~~~y~~-~~~~~~~~~~~~g 130 (392)
T 3qhx_A 57 GYEYARTGNPTRTALEAALAAVEDAA----FGRAFSSGMAAADCALRAM-LRPGDHVVIPDDAYGG-TFRLIDKVFTGWN 130 (392)
T ss_dssp TBCBTTTCCHHHHHHHHHHHHHTTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HHHHHHHTGGGGT
T ss_pred CccccCCCChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEeCCCcch-HHHHHHHHHHhcC
Confidence 45566666678889999999999986 4889999999999999988 7899997755 56664 3444445557789
Q ss_pred CEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCC
Q 006746 240 ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS 318 (632)
Q Consensus 240 ~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ 318 (632)
++++.++.+ ++++|+++|+++ +++|.+...+|+||...|++ |.++|+++|+++++|.++..+....+
T Consensus 131 ~~~~~v~~~------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~ 198 (392)
T 3qhx_A 131 VEYTPVALA------DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQP 198 (392)
T ss_dssp CEEEEECTT------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCG
T ss_pred cEEEEeCCC------CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCCh
Confidence 999999864 788999988754 58999999999999999999 99999999999999999887652223
Q ss_pred CCCCCCCCcEEEEccccccCCCCCc---eEEEEEeC
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSG---FGCLFVKK 351 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G---~G~L~Vr~ 351 (632)
+ .+++|+++.|+||++| |.| .|+++.++
T Consensus 199 ~---~~~~di~~~S~sK~lg--~~g~~~~G~v~~~~ 229 (392)
T 3qhx_A 199 L---SLGADVVLHSTTKYIG--GHSDVVGGALVTND 229 (392)
T ss_dssp G---GGTCSEEEEETTTTTT--CSSCCCCEEEEESC
T ss_pred H---HhCCcEEEEcCccccC--CCCCceEEEEEECc
Confidence 3 4689999999999999 555 78887774
No 97
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.87 E-value=5.3e-21 Score=222.79 Aligned_cols=320 Identities=11% Similarity=0.027 Sum_probs=225.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+.+.++.+++++|++. .+++++++|+|+++++.++ .++||+|+++ ..|+| .... ++..|+++++++.+
T Consensus 205 g~v~~~ee~la~l~G~d~---~i~~~~Gtt~a~~~~i~al-~~~GD~Vlv~~~~h~s-~~~~----~~~~G~~~v~v~~~ 275 (755)
T 2vyc_A 205 GAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKS-IEQG----LMLTGAKPVYMVPS 275 (755)
T ss_dssp HHHHHHHHHHHHHHTCSE---EEEESSHHHHHHHHHHHHH-CCTTCEEEEESSCCHH-HHHH----HHHHCCEEEEECCC
T ss_pred cHHHHHHHHHHHHhCCCc---eEEECCcHHHHHHHHHHHh-cCCCCEEEECCCchHH-HHHH----HHHcCCEEEEEeCC
Confidence 567799999999999962 5788888889999999998 7899998765 46665 3332 34579999999875
Q ss_pred CCc----ccc-----CHHHHHHHHHhc--Cc--CCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC
Q 006746 249 WPR----LRI-----NSEKLRKMVVSK--GK--KKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK 314 (632)
Q Consensus 249 ~~~----~~i-----~~~~l~~~i~~~--~~--~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~ 314 (632)
..+ +.+ +.++|+++|+++ ++ ...+++++++++. |.+|..+|++ |+++|+++|+++++|+|+....
T Consensus 276 ~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 276 RNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp BCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred CCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhc
Confidence 321 335 999999999763 21 1223468888884 7999999999 9999999999999999986532
Q ss_pred CCCCC--CCCC-CC--CcE------EEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 315 DMDSF--GLSL-VR--PDF------LICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 315 ~m~~l--dls~-~~--~Df------~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
...+. +.+. .+ +|+ ++.|+||+++. |.|.|+++++++.. .+.. .. + .
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g-~~~g~~i~~~~~~~-~i~~-------------~~-~--~---- 412 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRG-AINF-------------SR-F--N---- 412 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSC-CTTCEEEEEECCBT-CCCH-------------HH-H--H----
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECccccccC-cCCeeeeeecCccc-ccCH-------------HH-H--H----
Confidence 11111 1222 34 576 99999997764 88899999988710 0100 00 0 0
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCH
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 463 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl 463 (632)
..+. ..+.++++++.+.++. .|++++...|.
T Consensus 413 ---------~~~~----------------~~~s~sp~~~~iaal~------------------------aA~~~l~~~gg 443 (755)
T 2vyc_A 413 ---------QAYM----------------MHATTSPLYAICASND------------------------VAVSMMDGNSG 443 (755)
T ss_dssp ---------HHHH----------------HTSCSSCCHHHHHHHH------------------------HHHHHHSTHHH
T ss_pred ---------HHHH----------------HhCCCCHHHHHHHHHH------------------------HHHHHHHhhhH
Confidence 0000 0124567777788887 88888876656
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCC--CCCCCCcEEEECCCCCCC------------------------------------
Q 006746 464 TMISRRGRCLINWLVNALMKLQHP--NTEGNALVKIYGPKIRFD------------------------------------ 505 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~--~~~G~p~v~Iygp~~~~~------------------------------------ 505 (632)
..+.++...++.+++++|.++... +. +.-.+++|+|.....
T Consensus 444 ~~~~~~~~~~a~~~r~~L~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 522 (755)
T 2vyc_A 444 LSLTQEVIDEAVDFRQAMARLYKEFTAD-GSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFK 522 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccc-ccceeeccCchhccccccccccccccccchhccchhhhhccCccccccccc
Confidence 778899999999999999988210 00 001288888752100
Q ss_pred ---C------CcEEEEEEcc--CCCC----ccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccc
Q 006746 506 ---R------GPALAFNVFD--WKRE----KIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSK 570 (632)
Q Consensus 506 ---r------g~ivaFnv~~--~~G~----~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 570 (632)
. ...|+|++.+ .+|+ -+++..+.+.++++||.+..
T Consensus 523 ~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~------------------------------ 572 (755)
T 2vyc_A 523 DIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTR------------------------------ 572 (755)
T ss_dssp TCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSE------------------------------
T ss_pred ccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEee------------------------------
Confidence 1 2478898874 3442 37888999888888987641
Q ss_pred ccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 571 SDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 571 ~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+.||+++++.+|.+|+++|+++|++|..
T Consensus 573 ----------~~~~~v~~~~~~g~t~~~~~~l~~al~~~~~ 603 (755)
T 2vyc_A 573 ----------TTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_dssp ----------ECSSEEEEECCTTCCTTTTHHHHHHHHHHHH
T ss_pred ----------cCCCeEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 1346999999999999999999999999864
No 98
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.87 E-value=4.8e-20 Score=194.44 Aligned_cols=285 Identities=13% Similarity=0.147 Sum_probs=200.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|++++++++++++ .|+||+|+|+|+++++.++ |+|++ ...|++ ....++..|++++.++.+ +.
T Consensus 64 ~~l~~~la~~~~~~~~--~i~~~~g~t~al~~~~~~~-----d~vi~~~~~~~~-----~~~~~~~~g~~~~~~~~~-~~ 130 (361)
T 3ftb_A 64 RRLNKSIENYLKLKDI--GIVLGNGASEIIELSISLF-----EKILIIVPSYAE-----YEINAKKHGVSVVFSYLD-EN 130 (361)
T ss_dssp HHHHHHHHHHHTCCSC--EEEEESSHHHHHHHHHTTC-----SEEEEEESCCTH-----HHHHHHHTTCEEEEEECC-TT
T ss_pred HHHHHHHHHHhCCCcc--eEEEcCCHHHHHHHHHHHc-----CcEEEecCChHH-----HHHHHHHcCCeEEEeecC-cc
Confidence 5889999999999876 7999999999999999998 78664 455653 234567789999999998 45
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCC---CCCCCC-CC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKD---MDSFGL-SL 323 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~---m~~ldl-s~ 323 (632)
+.++++++++++++ + +++++++.+|+||..+|.+ |+++|+++|+++++|.++..... ...+.+ ..
T Consensus 131 ~~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 203 (361)
T 3ftb_A 131 MCIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKN 203 (361)
T ss_dssp SCCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTT
T ss_pred cCCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhccc
Confidence 56888999988875 4 8999999999999999854 56677799999999998763210 011111 12
Q ss_pred CCCcEEEEccccccCCCCCceEEEE-EeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccc
Q 006746 324 VRPDFLICSFYQIFGENPSGFGCLF-VKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 402 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G~G~L~-Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt 402 (632)
.+.++++.|++|.+|.+..++|+++ .+++.++.+..... .|
T Consensus 204 ~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~------------~~-------------------------- 245 (361)
T 3ftb_A 204 YSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQN------------PW-------------------------- 245 (361)
T ss_dssp CSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSC------------TT--------------------------
T ss_pred CCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCC------------CC--------------------------
Confidence 3445888899999983223357777 44444333322100 00
Q ss_pred cCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Q 006746 403 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 482 (632)
Q Consensus 403 ~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~ 482 (632)
+++.+...++. ++|+. ...++.+.++.+.+.+++.+.|.
T Consensus 246 ---------------~~~~~~~~~~~------------------------~~l~~--~~~~~~~~~~~~~~~~~l~~~l~ 284 (361)
T 3ftb_A 246 ---------------NINCFAEMAAI------------------------NCLKD--TNYIEESLLWIKKERKRFIEELN 284 (361)
T ss_dssp ---------------CSCHHHHHHHH------------------------HTSSC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------CCCHHHHHHHH------------------------HHhcC--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111122222 34432 12467888999999999999998
Q ss_pred ccCCCCCCCCCcEE-EECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhh
Q 006746 483 KLQHPNTEGNALVK-IYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 561 (632)
Q Consensus 483 ~l~h~~~~G~p~v~-Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~ 561 (632)
++ |.++ ++.+ .++.+.+.+.+ .+...+.+.+.++||.++.|..|..
T Consensus 285 ~~--------~~~~~~~~~-----~~~~~~~~~~~-----~~~~~l~~~l~~~gi~v~~g~~~~~--------------- 331 (361)
T 3ftb_A 285 KI--------GFIKRVFSP-----HANFVLCRLEN-----ISGEKLYDSLLKEDIVIRRCCNFIG--------------- 331 (361)
T ss_dssp HS--------SSEEEEECC-----SSSEEEEEESS-----SCHHHHHHHHHTTTEECEECTTSTT---------------
T ss_pred hC--------CCCceecCC-----CCeEEEEEcCC-----CCHHHHHHHHHHCCeEEeeCccCCC---------------
Confidence 87 6687 7655 36778888765 4566666666666999998865431
Q ss_pred hhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 562 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+.+.||+|++ +.+|+++|++.|+++++
T Consensus 332 -------------------~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 332 -------------------LDDSFVRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp -------------------CCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred -------------------CCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence 13469999987 99999999999998764
No 99
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.87 E-value=1.5e-20 Score=200.66 Aligned_cols=295 Identities=12% Similarity=0.114 Sum_probs=196.2
Q ss_pred HHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 174 AMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
+.|+.+++++ |++.+...|+||+|+|+|+.+++.++ +++||+|++. ..|++ + ...++..|++++.++.+
T Consensus 71 ~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~--~---~~~~~~~g~~~~~v~~~ 144 (388)
T 1j32_A 71 RLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAM-IEPGDEVIIPAPFWVS--Y---PEMVKLAEGTPVILPTT 144 (388)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEESSCCTH--H---HHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCChh--H---HHHHHHcCCEEEEecCC
Confidence 4455555554 65332337999999999999999998 7899997654 46664 2 33456789999999986
Q ss_pred CC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCC----C---C
Q 006746 249 WP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPK----D---M 316 (632)
Q Consensus 249 ~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~----~---m 316 (632)
.. ++.+++++|+++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++.... . +
T Consensus 145 ~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 218 (388)
T 1j32_A 145 VETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSI 218 (388)
T ss_dssp GGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred cccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCH
Confidence 32 4568999999988653 589999999999999987 77 8899999999999999876521 0 1
Q ss_pred CCCCCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchh
Q 006746 317 DSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKS 394 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 394 (632)
..++....+.|+++.|+||++| +.| +|+++++++.++.+.+...
T Consensus 219 ~~~~~~~~~~~~~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~-------------------------------- 264 (388)
T 1j32_A 219 GAASPEAYERSVVCSGFAKTYA--MTGWRVGFLAGPVPLVKAATKIQG-------------------------------- 264 (388)
T ss_dssp GGSCHHHHHTEEEEEESTTTTT--CTTTCCEEEECCHHHHHHHHHHHH--------------------------------
T ss_pred HHccccccCCEEEEeechhccC--CcccceEEEEeCHHHHHHHHHHHh--------------------------------
Confidence 1121111457999999999998 558 8999988776544432100
Q ss_pred hhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHH
Q 006746 395 KQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLI 474 (632)
Q Consensus 395 ~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~ 474 (632)
.++. +.+.+.... ..++|+.. ...++.+.++.+.+.
T Consensus 265 -----~~~~----------------~~~~~~~~a----------------------~~~~l~~~-~~~~~~~~~~~~~~~ 300 (388)
T 1j32_A 265 -----HSTS----------------NVCTFAQYG----------------------AIAAYENS-QDCVQEMLAAFAERR 300 (388)
T ss_dssp -----TTTC----------------SCCHHHHHH----------------------HHHHHHSC-SHHHHHHHHHHHHHH
T ss_pred -----hccc----------------CCCHHHHHH----------------------HHHHHhCC-cHHHHHHHHHHHHHH
Confidence 0000 000011000 00233211 112677788899999
Q ss_pred HHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcE-EEEEEccCCCCccCHHHHH-HHHHhCCcEEccCccCChHHHhHH
Q 006746 475 NWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPA-LAFNVFDWKREKIEPVLVQ-KLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 475 ~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~i-vaFnv~~~~G~~i~~~~V~-kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
++|.+.|.++ |.++++.|. ++. +.+.+.+. | ++...+. +|++++||.++.|..|.
T Consensus 301 ~~l~~~L~~~--------~g~~~~~~~-----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~------- 357 (388)
T 1j32_A 301 RYMLDALNAM--------PGLECPKPD-----GAFYMFPSIAKT-G--RSSLDFCSELLDQHQVATVPGAAFG------- 357 (388)
T ss_dssp HHHHHHHHTC--------TTCBCCCCC-----BTTEECCBCGGG-T--CCHHHHHHHHHHHHCEECEEGGGGT-------
T ss_pred HHHHHHHhhC--------CCCcccCCC-----eeEEEEEecCCC-C--CCHHHHHHHHHHhCCEEEeChhhhC-------
Confidence 9999999886 445555542 333 22233321 1 3455555 45556899998763211
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||+|++ ++.+||+++++.|+++++.
T Consensus 358 -----------------------------~~~~iRis~~--~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 358 -----------------------------ADDCIRLSYA--TDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp -----------------------------CTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCCcEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 1358999987 7999999999999988754
No 100
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.87 E-value=2.2e-20 Score=206.52 Aligned_cols=314 Identities=13% Similarity=-0.001 Sum_probs=207.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhh---CCCCCCC-----eEEEec-cccchhhHHHHHHHHhcC
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAES---YPFMSVK-----NLLTVY-DYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~s---l~~~~gd-----~ilt~~-d~~s~~v~~~~~~a~~~G 239 (632)
.++++++++.+++++|++. .+++|+++|+|+.+++.. +..++|| +|++.. .|++ +. ..++..|
T Consensus 106 ~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~--~~---~~~~~~G 177 (474)
T 1wyu_B 106 LRLMWELGEYLKALTGMDA---ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGS--NP---ATASMAG 177 (474)
T ss_dssp HHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTH--HH---HHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCc---eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChh--hH---HHHHHCC
Confidence 4788899999999999973 477899999999873333 2234665 777654 4543 22 3456789
Q ss_pred CEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccc-cchH-HHHHHhhCCcEEEEeccccCCCCCC
Q 006746 240 ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYL-WMRIAQENDWHILIDACALGPKDMD 317 (632)
Q Consensus 240 ~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~-~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~ 317 (632)
++++.++.+ +++.+|+++|+++|+++ +++|++++. |.||.. .|++ |+++|+++|+++++|+++..+. +.
T Consensus 178 ~~vv~v~~~-~~~~~d~~~L~~~i~~~------t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~-~g 248 (474)
T 1wyu_B 178 YQVREIPSG-PEGEVDLEALKRELGPH------VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAI-MG 248 (474)
T ss_dssp CEEEEECBC-TTSSBCHHHHHHHCSTT------EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGT-TT
T ss_pred CEEEEecCC-CCCCcCHHHHHHhhCCC------ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhh-cc
Confidence 999999987 57889999999998754 488889885 679998 6999 9999999999999999997654 12
Q ss_pred CCCCCCCCCcEEEEccccccCCCCC-----ceEEEEEeCCCccccCCCCCC--CceeecccccccccccccCCCCCCccc
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPS-----GFGCLFVKKSTVPILVDNTSS--GMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~-----G~G~L~Vr~~~~~~L~~~~~g--G~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
.++...+++|++++|+||+||. |. |+|+++++++.++.+.....+ |. ..... |. .... +
T Consensus 249 ~~~~~~~g~di~~~s~~K~~~~-p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~-~~~~~----~~-~~~~---~---- 314 (474)
T 1wyu_B 249 WARPGDMGFDVVHLNLHKTFTV-PHGGGGPGSGPVGVKAHLAPYLPVPLVERGEE-GFYLD----FD-RPKS---I---- 314 (474)
T ss_dssp TCCHHHHTCSEEECCTTTTTCC-CCTTSCCCCCCEEECGGGGGGCCSCEEEECSS-CEEEE----CC-CTTC---C----
T ss_pred CCCcccCCCcEEEEeCcccccc-CCCCCCCCeEEEEEcHHHHHhCCCCeeeccCC-eeEec----cc-Cccc---C----
Confidence 3444556899999999998876 74 699999999887767533221 10 00000 00 0000 0
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh---CHHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL---GLTMIS 467 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~---Gl~~I~ 467 (632)
.++ +.++.+. .++. +++..+..+ |+..+.
T Consensus 315 --~~~-------------------~~~~~~~---~~~~------------------------aa~~~l~~~g~~~l~~~~ 346 (474)
T 1wyu_B 315 --GRV-------------------RSFYGNF---LALV------------------------RAWAYIRTLGLEGLKKAA 346 (474)
T ss_dssp --CCS-------------------SSTTSCH---HHHH------------------------HHHHHHHHHHHHHHHHHH
T ss_pred --ccc-------------------ccCcCcH---HHHH------------------------HHHHHHHHHHHHHHHHHH
Confidence 000 0111111 1111 455555433 466668
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChH
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~ 547 (632)
++.+.++++|.+.|.++ |... ++++. ..+..++.| . .| ++...+.+.+.++||.+.+..+
T Consensus 347 ~~~~~~~~~l~~~L~~~------g~~~--~~~~~--~~~~~~~~~--~--~~--~~~~~l~~~L~~~Gi~~~~~~~---- 406 (474)
T 1wyu_B 347 ALAVLNARYLKELLKEK------GYRV--PYDGP--SMHEFVAQP--P--EG--FRALDLAKGLLELGFHPPTVYF---- 406 (474)
T ss_dssp HHHHHHHHHHHHHHHHT------TCBC--SSCSS--CCSCEEEBC--S--TT--CCHHHHHHHHHHTTCCCCEESC----
T ss_pred HHHHHHHHHHHHHHhhc------CcEe--cCCCC--cceEEEEEc--C--CC--CCHHHHHHHHHHCCcccccccc----
Confidence 88999999999999886 3222 12211 112233332 1 12 4566666655566887521100
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....+.||+|++.++|.+||+++++.|+++++.
T Consensus 407 -------------------------------~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 407 -------------------------------PLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp -------------------------------STTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred -------------------------------ccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 0012368999999999999999999999998865
No 101
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.86 E-value=3.5e-20 Score=199.50 Aligned_cols=168 Identities=11% Similarity=0.078 Sum_probs=135.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
....++.|+++++++|++ .+++++|+|+|+.+++.++ +++||+|++. ..|++ ....+...++..|++++.++.
T Consensus 58 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~ai~~~~~~~-~~~gd~vl~~~~~y~~-~~~~~~~~~~~~g~~~~~v~~ 131 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAA----GSAAFGSGMGAISSSTLAF-LQKGDHLIAGDTLYGC-TVSLFTHWLPRFGIEVDLIDT 131 (389)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHTTT-CCTTCEEEEESSCCHH-HHHHHHHHHHHTTCEEEEECT
T ss_pred ChHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCCchH-HHHHHHHHHHHcCCEEEEECC
Confidence 456789999999999986 3566778899999999998 7899997754 56665 344445556789999999876
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP 326 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~ 326 (632)
.+.++++++|+++ +++|.++..+|+||...|++ |.++|+++|+++++|.++..+....+++ +++
T Consensus 132 ------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~---~~~ 196 (389)
T 3acz_A 132 ------SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLE---LGA 196 (389)
T ss_dssp ------TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGG---TTC
T ss_pred ------CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCccc---cCC
Confidence 3788888888653 58999999999999999999 9999999999999999988765213554 579
Q ss_pred cEEEEccccccCCCCCc--eEEEEEeC-CCccccC
Q 006746 327 DFLICSFYQIFGENPSG--FGCLFVKK-STVPILV 358 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G--~G~L~Vr~-~~~~~L~ 358 (632)
|+++.|++|++|. |.+ .|++++++ +.++.+.
T Consensus 197 di~~~S~sK~~~~-~~~~~~G~v~~~~~~~~~~l~ 230 (389)
T 3acz_A 197 DIALHSVSKYING-HGDVIGGVSSAKTAEDIATIK 230 (389)
T ss_dssp SEEEEETTTTTTC-SSCCCCEEEEESSHHHHHHHH
T ss_pred eEEEECChhhccC-CCCceeEEEEECcHHHHHHHH
Confidence 9999999998775 666 59999988 6655443
No 102
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.86 E-value=9.9e-21 Score=202.79 Aligned_cols=324 Identities=12% Similarity=0.129 Sum_probs=216.7
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|+|.++. |+.|+.+++++.+.+... .+.... | .....++++++++
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~--------------------~~~~~~--~---~~~~~~~l~~~la 97 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETL--------------------MAMPQT--L---PTPMRGEFYRTLT 97 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHC--------------------CCCCTT--S---CCHHHHHHHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhC--------------------CCCccc--c---CCHHHHHHHHHHH
Confidence 45789999654 668888888876543211 000000 1 2356789999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCCCCeEEE-eccccchhhHHHHHHHHhcCCE------------EEEEe
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PFMSVKNLLT-VYDYESEAVEAMIRTSEKRGAR------------VMSAE 246 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~------------v~~v~ 246 (632)
++++++++ .|+||+|+|+|+.+++.++ .+.+|++|++ ...||+....++ +..|.+ +..++
T Consensus 98 ~~~~~~~~--~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~----~~~g~~~~~~~~~p~~~~~~~~~ 171 (395)
T 1vef_A 98 AILPPELN--RVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSL----SVTWEPKYREPFLPLVEPVEFIP 171 (395)
T ss_dssp HTSCTTEE--EEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH----HTCCCHHHHGGGCSCSSCEEEEC
T ss_pred HhcCCCcC--EEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhh----hhcCCcccccccCCCCCCeeEeC
Confidence 99988654 7999999999999998875 2356888664 456775333332 223443 33332
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc-CCCC--CCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL-GPKD--MDS 318 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~g~~--m~~ 318 (632)
. .|+++|+++|+++ +++|++.+.+|.||...| ++ |.++|+++|+++++|.++. .+.. ..+
T Consensus 172 ~------~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~ 239 (395)
T 1vef_A 172 Y------NDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFA 239 (395)
T ss_dssp T------TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSST
T ss_pred C------CcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhH
Confidence 2 4789999888643 589999988889999998 99 9999999999999999987 3221 011
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhh
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 398 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~ 398 (632)
++.....+|++ |++|++|. +.++|+++++++.++.+.+...++ .|
T Consensus 240 ~~~~~~~~d~~--s~sK~~~~-g~~~G~~~~~~~~~~~l~~~~~~~----------~~---------------------- 284 (395)
T 1vef_A 240 FEHFGIVPDIL--TLAKALGG-GVPLGVAVMREEVARSMPKGGHGT----------TF---------------------- 284 (395)
T ss_dssp HHHHTCCCSEE--EECGGGGT-TSSCEEEEEEHHHHHTSCTTSSCC----------SS----------------------
T ss_pred hhhcCCCCCEE--EEcccccC-CCceEEEEehHHHHhhhccCCcCC----------Cc----------------------
Confidence 22233467977 77998875 678999999988666554311100 00
Q ss_pred hccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHH
Q 006746 399 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLV 478 (632)
Q Consensus 399 e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~ 478 (632)
. .+.+...++. ++|+.+.+ +.+.++.+.+.+++.
T Consensus 285 -------~------------~~~~~~~a~~------------------------~al~~~~~---~~~~~~~~~~~~~l~ 318 (395)
T 1vef_A 285 -------G------------GNPLAMAAGV------------------------AAIRYLER---TRLWERAAELGPWFM 318 (395)
T ss_dssp -------T------------TCHHHHHHHH------------------------HHHHHHHH---HTTHHHHHHHHHHHH
T ss_pred -------C------------CCHHHHHHHH------------------------HHHHHHHh---CCHHHHHHHHHHHHH
Confidence 0 0111112222 56776654 456788999999999
Q ss_pred HHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhh
Q 006746 479 NALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 558 (632)
Q Consensus 479 ~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~ 558 (632)
+.|.++ +.+.+... ...+.++.|.+.+. ....+++|++++||.++.+
T Consensus 319 ~~l~~~------~~~~~~~~-----~~~g~~~~~~~~~~-----~~~l~~~l~~~~gi~v~~~----------------- 365 (395)
T 1vef_A 319 EKLRAI------PSPKIREV-----RGMGLMVGLELKEK-----AAPYIARLEKEHRVLALQA----------------- 365 (395)
T ss_dssp HHHHTS------CCTTEEEE-----EEETTEEEEEESSC-----SHHHHHHHHHHHCEECEES-----------------
T ss_pred HHHHHh------hcCceEEE-----EEEEEEEEEEEcCh-----HHHHHHHHHHHCCeEEecC-----------------
Confidence 999987 32333221 12467888877641 3344455553679988642
Q ss_pred hhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 559 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 559 ~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+.+.||+|++++++.+|++++++.|++++
T Consensus 366 -----------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 366 -----------------------GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp -----------------------STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred -----------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 23589999999999999999999999876
No 103
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.86 E-value=5.4e-21 Score=205.04 Aligned_cols=349 Identities=11% Similarity=0.017 Sum_probs=225.0
Q ss_pred EeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchh-HHHHHHHHHHHHHcCCCCCC
Q 006746 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQES-GLESAMKKRIMDFLNISEND 189 (632)
Q Consensus 111 yLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~-~~~~~~R~~ia~~l~a~~~e 189 (632)
...+++.+++++.+++++.+.+.... ..+++.+....|.... ...+.+|+.+++++|+++
T Consensus 26 i~~~~~~~~~~~~v~~a~~~~~~~~~-----------------~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~-- 86 (407)
T 2dkj_A 26 LELIASENFVSKQVREAVGSVLTNKY-----------------AEGYPGARYYGGCEVIDRVESLAIERAKALFGAAW-- 86 (407)
T ss_dssp EECCTTCCCCCHHHHHHHTSGGGGCC-----------------CCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE--
T ss_pred eeeccCCCCCCHHHHHHHHhhhhcCc-----------------ccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCc--
Confidence 33456667779999999876543100 0022222221122222 333358889999999974
Q ss_pred ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCC--EEEEEeccCCccccCHHHHHHHHHhc
Q 006746 190 YGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGA--RVMSAEFSWPRLRINSEKLRKMVVSK 266 (632)
Q Consensus 190 y~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~--~v~~v~~~~~~~~i~~~~l~~~i~~~ 266 (632)
..+++.|+|+|+.+++.++ +++|++|++. ..|++ .... ...++..|+ .+..++++..++.+|+++|++++++.
T Consensus 87 -~~i~~~sGt~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 162 (407)
T 2dkj_A 87 -ANVQPHSGSQANMAVYMAL-MEPGDTLMGMDLAAGG-HLTH-GSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEH 162 (407)
T ss_dssp -EECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTC-CGGG-TCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHH
T ss_pred -ceEEecchHHHHHHHHHHh-cCCCCEEEEecccccC-ccch-HHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhc
Confidence 3455556778999999998 7899997654 46654 2110 011223344 34444434235678999999999752
Q ss_pred CcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC---CCCCCCCCCCCCcEEEEccccccCCCCC
Q 006746 267 GKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK---DMDSFGLSLVRPDFLICSFYQIFGENPS 342 (632)
Q Consensus 267 ~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~---~m~~ldls~~~~Df~~~S~hK~~G~~P~ 342 (632)
++++++++...| |...|++ |.++|+++|+++++|.++..|. +.....++ .+|++++|+||+++. |.
T Consensus 163 -----~~~~v~~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~l~g-~~ 232 (407)
T 2dkj_A 163 -----RPKVIVAGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP--YAHVVTSTTHKTLRG-PR 232 (407)
T ss_dssp -----CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT--TCSEEEEESSGGGCC-CS
T ss_pred -----CCeEEEEecccc--CCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc--cccEEEEeccccCCC-CC
Confidence 247888854444 5889999 9999999999999999987632 10111111 379999999996653 77
Q ss_pred ceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCccc
Q 006746 343 GFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQ 421 (632)
Q Consensus 343 G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~ 421 (632)
| |+++++ ++.++.+.+.... | ..++++.
T Consensus 233 ~-G~~~~~~~~~~~~l~~~~~~------------~--------------------------------------~~~~~~~ 261 (407)
T 2dkj_A 233 G-GLILSNDPELGKRIDKLIFP------------G--------------------------------------IQGGPLE 261 (407)
T ss_dssp C-EEEEESCHHHHHHHHHHHTT------------T--------------------------------------TCSSCCH
T ss_pred c-eEEEECCHHHHHHHHhhhcc------------c--------------------------------------ccCCCcH
Confidence 6 999998 5665444321100 0 0111222
Q ss_pred chhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCC
Q 006746 422 GEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 501 (632)
Q Consensus 422 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~ 501 (632)
..+.++. ++|+.+...+++.+.++.+.+.+++.+.|.++ | ++++++.
T Consensus 262 ~~~~a~~------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~ 308 (407)
T 2dkj_A 262 HVIAGKA------------------------VAFFEALQPEFKEYSRLVVENAKRLAEELARR------G---YRIVTGG 308 (407)
T ss_dssp HHHHHHH------------------------HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT------T---CEEGGGS
T ss_pred HHHHHHH------------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC------C---ceeecCC
Confidence 2223333 67777655578999999999999999999987 3 4566542
Q ss_pred CCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCC
Q 006746 502 IRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 581 (632)
Q Consensus 502 ~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 581 (632)
..+.++.+.+.+. | ++...+.+.+.++||.++.|..... .. ...
T Consensus 309 ---~~~~~~~~~~~~~-~--~~~~~~~~~l~~~gi~v~~~~~~~~----~~--------------------------~~~ 352 (407)
T 2dkj_A 309 ---TDNHLFLVDLRPK-G--LTGKEAEERLDAVGITVNKNAIPFD----PK--------------------------PPR 352 (407)
T ss_dssp ---CSSSEEEEECGGG-T--CCHHHHHHHHHHTTEECEECCCTTC----SS--------------------------CTT
T ss_pred ---CCceEEEEECccc-C--CCHHHHHHHHHHcCceecCCcCccc----cc--------------------------ccc
Confidence 3578888887641 1 4667777777889999987742100 00 011
Q ss_pred CCcEEEEccCCC----CCHHHHHHHHHHHHHhhhh
Q 006746 582 GITVVTASLGYL----ANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 582 ~~~~VRvSlg~~----~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.+|+|++.+ .|.+|++++++.|+++++.
T Consensus 353 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 353 VTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp TCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred CCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 235899999876 7999999999999999876
No 104
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.86 E-value=2e-21 Score=213.44 Aligned_cols=285 Identities=13% Similarity=0.043 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..++++|+.+++ +|++ ..++||+|+|+|+.+++.++ +++||+|++.. .|++ ... .+...|++++.++..
T Consensus 57 ~~~~~~~~~la~-~g~~---~~v~~~~G~t~a~~~~~~a~-~~~gd~Vlv~~~~h~s-~~~----~~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY---DGYFLVNGTTSGILSVIQSF-SQKKGDILMARNVHKS-VLH----ALDISQQEGHFIETH 126 (446)
T ss_dssp SHHHHHHHHHCS-CTTE---EEEEESSHHHHHHHHHHHTT-TTSSSCEEECTTCCHH-HHH----HHHHHTCCEEECEEE
T ss_pred hHHHHHHHHHHh-cCCC---ceEEEeCCHHHHHHHHHHHh-cCCCCEEEEecCccHH-HHH----HHHHcCCeEEEEeCe
Confidence 466899999999 9986 27999999999999999998 78999987654 5664 232 234479999998873
Q ss_pred C-Cc----cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCC-C-CCC
Q 006746 249 W-PR----LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDM-D-SFG 320 (632)
Q Consensus 249 ~-~~----~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m-~-~ld 320 (632)
+ ++ +.++.++| +.+ +++++++++ .|.+|..+|++ |+++|+++|+++++|.++...... . +++
T Consensus 127 ~~~~~~~~~~~d~~~l---~~~------~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~ 196 (446)
T 2x3l_A 127 QSPLTNHYNKVNLSRL---NND------GHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDS 196 (446)
T ss_dssp ECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCC
T ss_pred eccccCcCCCCCHHHH---cCC------CceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCC
Confidence 2 22 45777776 333 358899999 67799999999 999999999999999998761100 0 445
Q ss_pred CCCCCCcEEEEcccc-ccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 321 LSLVRPDFLICSFYQ-IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 321 ls~~~~Df~~~S~hK-~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
...+++|+++.|+|| ++| |.|+|+|+++++.++ +.+...+ . .. +
T Consensus 197 ~~~~g~Di~~~S~~K~l~~--~~g~g~l~~~~~~i~-~~~~~~~------------~-----------------~~--~- 241 (446)
T 2x3l_A 197 TLNYQADYVVQSFHKTLPA--LTMGSVLYIHKNAPY-RENIIEY------------L-----------------SY--F- 241 (446)
T ss_dssp GGGGTCSEEEECHHHHSSS--CTTCEEEEEETTCTT-HHHHHHH------------H-----------------HH--H-
T ss_pred hHHcCCCEEEECCcccccc--ccccEEEEEcCCcCC-HHHHHHH------------H-----------------HH--H-
Confidence 555678999999999 555 889999999987653 2110000 0 00 0
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
+.++++...+.++. .+++++...|.+.+.+|.+.+.+++++
T Consensus 242 ---------------~~~s~~~~~~aal~------------------------~a~~~l~~~g~~~~~~~~~~l~~~l~~ 282 (446)
T 2x3l_A 242 ---------------QTSSPSYLIMASLE------------------------SAAQFYKTYDSTLFFAKRAQLIECLEN 282 (446)
T ss_dssp ---------------SCSSCCHHHHHHHH------------------------HHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred ---------------cCCCchHHHHHHHH------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 12334444455565 678888888888889999999999888
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEc-cCccCChHHHhHHHHhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLS-YGSLHHIWFSDKYQKEKDN 558 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr-~G~~c~~~~~~~~~~~~~~ 558 (632)
. . ++++++.+ +..+.|.+.+ ++...+.+.+.++||.++ .|
T Consensus 283 ~--g-----------~~~~~~~~----~~~l~i~~~~-----~~~~~l~~~L~~~GI~v~~~g----------------- 323 (446)
T 2x3l_A 283 K--G-----------FEMLQVDD----PLKLLIKYEG-----FTGHDIQNWFMNAHIYLELAD----------------- 323 (446)
T ss_dssp H--T-----------CEEEECSS----TTEEEEECTT-----SCHHHHHHHHHHTTEEESEEC-----------------
T ss_pred c--C-----------CEECcCCC----CeEEEEEeCC-----cCHHHHHHHHHHCCCEEEecC-----------------
Confidence 7 2 34555532 2346777653 566777766666699986 22
Q ss_pred hhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 559 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 559 ~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.||++++.++|.+|+ ++++.|+++++.
T Consensus 324 ------------------------~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 324 ------------------------DYQALAILPLWHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp ------------------------SSCEEEECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred ------------------------CCEEEEEeecCCCHHHH-HHHHHHHHHHHh
Confidence 25899999999999999 999999998754
No 105
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.86 E-value=1.7e-20 Score=202.04 Aligned_cols=323 Identities=13% Similarity=0.085 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
....+.|+++++++|++ .++|++|+|+|+.+++.++.+++||+|++. ..|++ + ...++..|++++.++++
T Consensus 63 ~~~~~l~~~la~~~~~~----~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~--~---~~~~~~~g~~~~~~~~~ 133 (399)
T 2oga_A 63 PELEGFEAEFAAYCETD----HAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIA--S---WLAVSATGATPVPVEPH 133 (399)
T ss_dssp HHHHHHHHHHHHHTTSS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH--H---HHHHHHTTCEEEEECBC
T ss_pred hhHHHHHHHHHHHHCCC----eEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHH--H---HHHHHHCCCEEEEEecC
Confidence 45678999999999985 478899999999999999877899997654 56664 2 23456789999999987
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCC--
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVR-- 325 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~-- 325 (632)
+.++.+++++|+++|+++ +++|+ .+|+||...|++ |.++|+++|+++++|+++..+.. .+...++
T Consensus 134 ~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~---~~~~~~~~~ 201 (399)
T 2oga_A 134 EDHPTLDPLLVEKAITPR------TRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGAR---YRGRRIGAG 201 (399)
T ss_dssp SSSSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCE---ETTEETTCT
T ss_pred CCCCCcCHHHHHHhcCCC------CeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCc---cCCeecccc
Confidence 445679999999988753 46666 357899999999 99999999999999999987741 1222233
Q ss_pred CcEEEEccc--cccCCCCCc-eEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 326 PDFLICSFY--QIFGENPSG-FGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 326 ~Df~~~S~h--K~~G~~P~G-~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
+|++++|+| |++| |.| .|+++.+ ++.++.+.+....|... . |... ..|
T Consensus 202 ~di~~~S~~~sK~~~--~~G~~g~~~~~~~~~~~~l~~~~~~g~~~------~-~~~~-------------------~~g 253 (399)
T 2oga_A 202 SSVAAFSFYPGKNLG--CFGDGGAVVTGDPELAERLRMLRNYGSRQ------K-YSHE-------------------TKG 253 (399)
T ss_dssp TCEEEEECCTTSSSC--CSSCCEEEEESCHHHHHHHHHHHBTTCSS------T-TCCC-------------------SCC
T ss_pred cCEEEEeCCCCccCC--cCCceEEEEeCCHHHHHHHHHHHhcCccc------c-cccc-------------------ccc
Confidence 699999996 9999 534 5566655 45554444321111100 0 0000 001
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
.. +. .+......+ .++|+. ++.+.++.+.+.+++.+.|
T Consensus 254 ~~-~~------------~~~~~~a~~------------------------~~~l~~-----~~~~~~~~~~~~~~l~~~L 291 (399)
T 2oga_A 254 TN-SR------------LDEMQAAVL------------------------RIRLAH-----LDSWNGRRSALAAEYLSGL 291 (399)
T ss_dssp CB-CC------------CCHHHHHHH------------------------HHHHHT-----HHHHHHHHHHHHHHHHHHT
T ss_pred cC-CC------------cCHHHHHHH------------------------HHHHHH-----HHHHHHHHHHHHHHHHHHh
Confidence 00 00 000001111 133333 4556788889999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCCcE-EEEEEccCCCCccCHHHHHHHHHhCCcEEccCcc-CChHHHhHHHHhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRGPA-LAFNVFDWKREKIEPVLVQKLADRENISLSYGSL-HHIWFSDKYQKEKDNV 559 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg~i-vaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~-c~~~~~~~~~~~~~~~ 559 (632)
.++ |.+++..+. ....++ +.|.+.. .+...+.+.+.++||.++.++. +... .. .
T Consensus 292 ~~~--------~g~~~~~~~--~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gI~v~~~~~~~~~~--~~-------~ 347 (399)
T 2oga_A 292 AGL--------PGIGLPVTA--PDTDPVWHLFTVRT-----ERRDELRSHLDARGIDTLTHYPVPVHL--SP-------A 347 (399)
T ss_dssp TTC--------TTCBCCCCC--TTEECCCSSEEEEC-----SSHHHHHHHHHHTTBCCBCSCSSCGGG--SH-------H
T ss_pred ccC--------CCccccCCC--CCCcceeEEEEEEC-----CCHHHHHHHHHHCCCceecCCCCcccc--ch-------h
Confidence 876 445554322 122233 3455543 2566677767778999987642 1110 00 0
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.... ........ ......++||+|++.++|.+||+++++.|+++++.
T Consensus 348 ~~~~~--~~~~~~p~---~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 348 YAGEA--PPEGSLPR---AESFARQVLSLPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp HHTTS--CCTTSCHH---HHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred hcccC--CCCCCChh---HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 00000 00000000 00001258999999999999999999999998753
No 106
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=1.5e-20 Score=198.98 Aligned_cols=282 Identities=13% Similarity=0.133 Sum_probs=197.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+++++++|++++ .|+||+|+|+|+++++.++ +++||+|++. ..|++ ....++..|++++.++.+ +.
T Consensus 68 ~~lr~~la~~~g~~~~--~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~~~~-----~~~~~~~~g~~~~~v~~~-~~ 138 (360)
T 3hdo_A 68 QKLREVAGELYGFDPS--WIIMANGSDEVLNNLIRAF-AAEGEEIGYVHPSYSY-----YGTLAEVQGARVRTFGLT-GD 138 (360)
T ss_dssp HHHHHHHHHHHTCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEEESSSCTH-----HHHHHHHHTCEEEEECBC-TT
T ss_pred HHHHHHHHHHhCcCcc--eEEEcCCHHHHHHHHHHHH-hCCCCEEEEcCCChHH-----HHHHHHHCCCEEEEeeCC-CC
Confidence 4789999999998765 7999999999999999998 7899997754 45553 234567789999999986 33
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC--CCCCCCCCC-CCCCCc
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG--PKDMDSFGL-SLVRPD 327 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~--g~~m~~ldl-s~~~~D 327 (632)
+.+ +++++. .+++++++++.+|+||..+|++ +.++|+++|+++++|.++.. +. ..+.+ ...+.+
T Consensus 139 ~~~--~~l~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~ 206 (360)
T 3hdo_A 139 FRI--AGFPER--------YEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAES--NALELVRRHENV 206 (360)
T ss_dssp SSB--TTCCSS--------BCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSC--CCTHHHHHCSSE
T ss_pred CCH--HHHHhh--------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCc--chhHHhccCCCE
Confidence 334 333211 1246999999999999999999 99999999999999998773 22 12211 234567
Q ss_pred EEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCc
Q 006746 328 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 407 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~ 407 (632)
+++.|++|.+|.+..++|+++++++.++.+..... .|
T Consensus 207 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~------------~~------------------------------- 243 (360)
T 3hdo_A 207 VVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRD------------HY------------------------------- 243 (360)
T ss_dssp EEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSC------------SC-------------------------------
T ss_pred EEEecchHhhcCCccceeeEeeCHHHHHHHHHhCC------------CC-------------------------------
Confidence 99999999988422346888876655443322100 00
Q ss_pred cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCC
Q 006746 408 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 487 (632)
Q Consensus 408 ~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~ 487 (632)
+.+.+...++. ++|+.. ..++.+.++.+.+.+++.+.|.++
T Consensus 244 ----------~~~~~~~~a~~------------------------~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~--- 284 (360)
T 3hdo_A 244 ----------NLDRLAQAACV------------------------AALRDQ--AYLSECCRRIRETREWFTTELRSI--- 284 (360)
T ss_dssp ----------CSCHHHHHHHH------------------------HHHHCH--HHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ----------CCCHHHHHHHH------------------------HHhcCH--HHHHHHHHHHHHHHHHHHHHHHHC---
Confidence 01111112221 444431 136788889999999999999887
Q ss_pred CCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccc
Q 006746 488 NTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREA 567 (632)
Q Consensus 488 ~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 567 (632)
| ++++.+ .+..+.+.+.+ ++...+.+.+.++||.++.|..
T Consensus 285 ---~---~~~~~~-----~~~~~~~~~~~-----~~~~~l~~~l~~~gi~v~~~~~------------------------ 324 (360)
T 3hdo_A 285 ---G---YDVIPS-----QGNYLFATPPD-----RDGKRVYDGLYARKVLVRHFSD------------------------ 324 (360)
T ss_dssp ---T---CEECCC-----SSSEEEEECTT-----CCHHHHHHHHHHTTEECBCCCS------------------------
T ss_pred ---C---CEEcCC-----CccEEEEECCC-----CCHHHHHHHHHHCCEEEEECCC------------------------
Confidence 3 344432 46677776654 4677777777788999986521
Q ss_pred cccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 568 KSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+.||+|++ +.+|+++|++.|+++.+.
T Consensus 325 ------------~~~~~~iRis~~---~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 325 ------------PLLAHGMRISIG---TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp ------------TTTTTSEEEECC---CHHHHHHHHHHHHHHHC-
T ss_pred ------------CCCCCEEEEEcC---CHHHHHHHHHHHHHHhcc
Confidence 012368999987 999999999999988664
No 107
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.86 E-value=9.2e-21 Score=203.21 Aligned_cols=289 Identities=17% Similarity=0.172 Sum_probs=198.3
Q ss_pred HHHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 173 SAMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.|+.+++++ |++.+...|++|+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.++.
T Consensus 81 ~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~ 154 (389)
T 1o4s_A 81 YELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMAL-LDPGDEVIVFSPVWVS-Y----IPQIILAGGTVNVVET 154 (389)
T ss_dssp HHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEEec
Confidence 36677777776 76322237999999999999999998 788999765 456664 2 2345678999999998
Q ss_pred cCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCCCC-CCCC
Q 006746 248 SWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKDMD-SFGL 321 (632)
Q Consensus 248 ~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~m~-~ldl 321 (632)
+.. +..+++++|+++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++..+..-. ..++
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~ 228 (389)
T 1o4s_A 155 FMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSI 228 (389)
T ss_dssp CGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCH
T ss_pred CCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCH
Confidence 632 3468999999888643 588999999999999998 88 8999999999999999987643100 1111
Q ss_pred ---C-CCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhh
Q 006746 322 ---S-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 322 ---s-~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
. ..+.|+++.|++|++| +.| +|+++++++.++.+.+...
T Consensus 229 ~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~l~~~~~~~~~l~~~~~--------------------------------- 273 (389)
T 1o4s_A 229 LDVSEGFDRIVYINGFSKSHS--MTGWRVGYLISSEKVATAVSKIQS--------------------------------- 273 (389)
T ss_dssp HHHCSSSTTEEEEEESTTTTT--CGGGCCEEEECCHHHHHHHHHHHH---------------------------------
T ss_pred hhcCCCCCcEEEEeechhhcC--CcccceEEEEeCHHHHHHHHHHhh---------------------------------
Confidence 1 1467999999999998 557 8999998766544332100
Q ss_pred hhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHH
Q 006746 396 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~ 475 (632)
.++.. .+.+... .++..+. .|++.+.++.+.+.+
T Consensus 274 ----~~~~~----------------~~~~~~~-------------------------a~~~~l~-~~~~~~~~~~~~~~~ 307 (389)
T 1o4s_A 274 ----HTTSC----------------INTVAQY-------------------------AALKALE-VDNSYMVQTFKERKN 307 (389)
T ss_dssp ----HHTCS----------------CCHHHHH-------------------------HHHHHTT-CCCHHHHHHHHHHHH
T ss_pred ----hcccC----------------CCHHHHH-------------------------HHHHHHh-ccHHHHHHHHHHHHH
Confidence 00000 0000000 2222232 247888999999999
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHH-HHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLV-QKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V-~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
++.+.|.++ |. +++.|. .+..+.+.+. .+...+ ++|++++||.++.|..|.
T Consensus 308 ~l~~~L~~~------g~---~~~~~~----~~~~~~~~~~------~~~~~l~~~l~~~~gi~v~~g~~f~--------- 359 (389)
T 1o4s_A 308 FVVERLKKM------GV---KFVEPE----GAFYLFFKVR------GDDVKFCERLLEEKKVALVPGSAFL--------- 359 (389)
T ss_dssp HHHHHHHHT------TC---CCCCCS----BSSEEEEECS------SCHHHHHHHHHHHHCEECEEGGGGT---------
T ss_pred HHHHHHHhc------CC---eeecCC----cceEEEEeCC------CCHHHHHHHHHHHCCEEEeCchhcC---------
Confidence 999999987 32 333331 2334444543 244445 455568899998663211
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|++ ++.+||+++++.|+++++
T Consensus 360 ---------------------------~~~~~Ris~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 360 ---------------------------KPGFVRLSFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp ---------------------------CTTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred ---------------------------CCCeEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 1258999998 499999999999998875
No 108
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.86 E-value=1.2e-19 Score=195.72 Aligned_cols=294 Identities=15% Similarity=0.133 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccC
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSW 249 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~ 249 (632)
..++.++.+++++|++. .+++.++|+|+..++.++ .++||.|++.. .|++ .. ...+..|++++.++.
T Consensus 105 ~~~~l~~~la~~~g~~~----~i~~~sGt~a~~~~l~~~-~~~gd~Vl~~~~~~~~-~~----~~~~~~g~~~~~~~~-- 172 (409)
T 3kki_A 105 DKPMIEKRLAKFTGFDE----CLLSQSGWNANVGLLQTI-CQPNTNVYIDFFAHMS-LW----EGARYANAQAHPFMH-- 172 (409)
T ss_dssp TSCHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHH-CCTTCEEEEETTSCHH-HH----HHHHHTTCEEEEECT--
T ss_pred HHHHHHHHHHHHhCCCe----EEEecchHHHHHHHHHHh-cCCCCEEEECCCcCHH-HH----HHHHHcCCeEEEecC--
Confidence 34578999999999862 345566789999888888 68999987654 4443 22 234557888876653
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCC--------CCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMD--------SFG 320 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~--------~ld 320 (632)
.|+++|+++|.+++ +++|++++..|+||...|++ |.++|+++|+++++|.++..+.- . .++
T Consensus 173 ----~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~-g~~g~~~~~~~~ 242 (409)
T 3kki_A 173 ----NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTH-GPNGAGLLAELG 242 (409)
T ss_dssp ----TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTS-SGGGCCHHHHHT
T ss_pred ----CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCcchhhcC
Confidence 57899999998642 48999999999999999999 99999999999999999876431 1 122
Q ss_pred CCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 321 LSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 321 ls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
+. .++|+++.|++|.+| +. .|+++.+++.++.+..... .| .+ .
T Consensus 243 ~~-~~~di~~~s~sK~~~--~~-gg~v~~~~~~~~~~~~~~~------------~~-----------------~~----~ 285 (409)
T 3kki_A 243 LT-REVHFMTASLAKTFA--YR-AGAIWCNNEVNRCVPFISY------------PA-----------------IF----S 285 (409)
T ss_dssp CG-GGCSEEEEESSSTTC--SS-CEEEEESSSGGGTHHHHCH------------HH-----------------HH----S
T ss_pred CC-CCCCEEEeecchhhC--CC-ceEEEECHHHHHHHHHhCc------------Cc-----------------cc----c
Confidence 21 368999999999999 43 4888888876654432100 00 00 0
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~ 480 (632)
+ +.+...+.++. ++|+.++.. +.+.++.+.+.++|++.
T Consensus 286 ~----------------~~~~~~~aa~~------------------------aal~~~~~~--~~~~~~~~~~~~~l~~~ 323 (409)
T 3kki_A 286 S----------------TLLPYEAAGLE------------------------TTLEIIESA--DNRRQHLDRMARKLRIG 323 (409)
T ss_dssp B----------------CCCHHHHHHHH------------------------HHHHHHHHC--HHHHHHHHHHHHHHHHH
T ss_pred C----------------CCcHHHHHHHH------------------------HHHHHHhcC--HHHHHHHHHHHHHHHHH
Confidence 0 01111222332 677777654 67888999999999999
Q ss_pred HHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
|.++ |.+ +. ..+.++.+.+.+. .+...+.+.+.++||.++.+++..
T Consensus 324 L~~~------g~~---~~------~~~~~~~~~~~~~----~~~~~~~~~L~~~Gv~v~~~~~~~--------------- 369 (409)
T 3kki_A 324 LSQL------GLT---IR------SESQIIGLETGDE----RNTEKVRDYLESNGVFGSVFCRPA--------------- 369 (409)
T ss_dssp HHTT------TCC---CC------CSSSEEEEEEESH----HHHHHHHHHHHHTTEECEEECTTS---------------
T ss_pred HHHc------CCc---cC------CCCCEEEEEeCCH----HHHHHHHHHHHHCCceEeeeCCCC---------------
Confidence 9987 432 22 2577888877642 123344444445599987543211
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhccccccccee
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVEKARWRY 622 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f~~~~~~~~ 622 (632)
...+.+.||+|++.++|.+||+++++.|++.++. ..|++
T Consensus 370 ------------------~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~-----~~~~~ 408 (409)
T 3kki_A 370 ------------------TSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY-----GDFYF 408 (409)
T ss_dssp ------------------SCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH-----SSCCC
T ss_pred ------------------cCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc-----CCCCc
Confidence 0124579999999999999999999999998764 36764
No 109
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.86 E-value=1.5e-20 Score=199.26 Aligned_cols=285 Identities=10% Similarity=0.066 Sum_probs=195.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|++++++++++++ .|+||+|+|+|+.+++.++ +||+|++ ...|++ ....++..|++++.++.+..+
T Consensus 62 ~~l~~~la~~~~~~~~--~v~~~~g~~~al~~~~~~~---~gd~vl~~~p~y~~-----~~~~~~~~g~~~~~v~~~~~~ 131 (364)
T 1lc5_A 62 FHLHQALARHHQVPAS--WILAGNGETESIFTVASGL---KPRRAMIVTPGFAE-----YGRALAQSGCEIRRWSLREAD 131 (364)
T ss_dssp HHHHHHHHHHHTSCGG--GEEEESSHHHHHHHHHHHH---CCSEEEEEESCCTH-----HHHHHHHTTCEEEEEECCGGG
T ss_pred HHHHHHHHHHHCcCHH--HEEECCCHHHHHHHHHHHc---CCCeEEEeCCCcHH-----HHHHHHHcCCeEEEEeCCccc
Confidence 5899999999999765 7999999999999999998 5788765 445654 234457789999999986322
Q ss_pred cccC-HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCC--CCCCCCC-CC
Q 006746 252 LRIN-SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPK--DMDSFGL-SL 323 (632)
Q Consensus 252 ~~i~-~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~--~m~~ldl-s~ 323 (632)
+ ++ ++++.+.+.+ +++++++++.+|+||..+| ++ |+++|+++|+++++|.++.... ....+++ ..
T Consensus 132 ~-~~~l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 204 (364)
T 1lc5_A 132 G-WQLTDAILEALTP------DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKD 204 (364)
T ss_dssp T-TCCCTTHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTT
T ss_pred c-cchhHHHHHhccC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhcc
Confidence 2 33 3444444432 3588999999999999999 77 8999999999999999986422 0012332 34
Q ss_pred CCCcEEEEccccccCCCCCc--eEEEE-EeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhc
Q 006746 324 VRPDFLICSFYQIFGENPSG--FGCLF-VKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 400 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G--~G~L~-Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~ 400 (632)
.+.|+++.|++|++|. .| +|+++ .+++.++.+.+... .|
T Consensus 205 ~~~~i~~~s~sK~~~~--~G~r~G~~~~~~~~~~~~l~~~~~------------~~------------------------ 246 (364)
T 1lc5_A 205 NPHIWVLRSLTKFYAI--PGLRLGYLVNSDDAAMARMRRQQM------------PW------------------------ 246 (364)
T ss_dssp CTTEEEEEESTTTTTC--TTTCCEEEECCCHHHHHHHHHHSC------------TT------------------------
T ss_pred CCCEEEEEECchhhcC--CccceEEEEECCHHHHHHHHHhCC------------CC------------------------
Confidence 6779999999999984 36 69999 77766554432100 01
Q ss_pred cccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q 006746 401 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 480 (632)
Q Consensus 401 gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~ 480 (632)
+.+.+...++. ++|+.. ..++.+.++.+.+.+++.+.
T Consensus 247 -----------------~~~~~~~~~~~------------------------~~l~~~--~~~~~~~~~~~~~~~~l~~~ 283 (364)
T 1lc5_A 247 -----------------SVNALAALAGE------------------------VALQDS--AWQQATWHWLREEGARFYQA 283 (364)
T ss_dssp -----------------CSCHHHHHHHH------------------------HGGGCH--HHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------CCCHHHHHHHH------------------------HHHhCc--HHHHHHHHHHHHHHHHHHHH
Confidence 00111111111 333321 24677888888999999999
Q ss_pred HHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 481 LMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 481 L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
|.++ |.++++.+ .+..+.+.+.+. ....+++|. ++||.++.|..|..
T Consensus 284 L~~~--------~~~~~~~~-----~g~~~~~~~~~~-----~~~l~~~l~-~~gi~v~~g~~~~~-------------- 330 (364)
T 1lc5_A 284 LCQL--------PLLTVYPG-----RANYLLLRCERE-----DIDLQRRLL-TQRILIRSCANYPG-------------- 330 (364)
T ss_dssp HHTS--------TTEEECCC-----SSSEEEEEESCT-----TCCHHHHHH-TTTEECEECTTSTT--------------
T ss_pred HhcC--------CCCEECCC-----CCeEEEEECCCc-----HHHHHHHHH-HCCcEEeeCcccCC--------------
Confidence 9876 56777632 467777777541 123444444 56999987754421
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+.+.||+|++ +.+|+++|++.|+++++
T Consensus 331 --------------------~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 331 --------------------LDSRYYRVAIR---SAAQNERLLAALRNVLT 358 (364)
T ss_dssp --------------------CCTTEEEEECC---CHHHHHHHHHHHHHHC-
T ss_pred --------------------CCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 12469999964 79999999999999865
No 110
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.86 E-value=1.5e-20 Score=202.54 Aligned_cols=296 Identities=12% Similarity=0.083 Sum_probs=200.6
Q ss_pred HHHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.+++++ +++++ .|++|+|+|+|+.+++.++ +++||+|++ ...|++ ....++..|++++.+
T Consensus 81 ~~l~~~la~~l~~~~g~~~~~~--~v~~t~g~~~al~~~~~~l-~~~gd~Vl~~~~~~~~-----~~~~~~~~g~~~~~v 152 (406)
T 1xi9_A 81 PELRKAIVEREKRKNGVDITPD--DVRVTAAVTEALQLIFGAL-LDPGDEILVPGPSYPP-----YTGLVKFYGGKPVEY 152 (406)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH-----HHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCHH--HEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCcc-----HHHHHHHcCCEEEEe
Confidence 35677777776 34443 7999999999999999998 788999765 456653 234456789999999
Q ss_pred eccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCC-CCCC
Q 006746 246 EFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKD-MDSF 319 (632)
Q Consensus 246 ~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~-m~~l 319 (632)
+.+. .+..+|+++|+++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++..... -...
T Consensus 153 ~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 226 (406)
T 1xi9_A 153 RTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI 226 (406)
T ss_dssp EEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC
T ss_pred ecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCC
Confidence 9873 23457999999988653 588999999999999988 77 89999999999999999876320 0011
Q ss_pred CCCC--CCC-cEEEEccccccCCCCCc--eEEEE--EeC----CCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 320 GLSL--VRP-DFLICSFYQIFGENPSG--FGCLF--VKK----STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 320 dls~--~~~-Df~~~S~hK~~G~~P~G--~G~L~--Vr~----~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
.+.. .+. |+++.|++|++| +.| +|+++ .++ +.++.+....
T Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~~~l~~~l~~~~--------------------------- 277 (406)
T 1xi9_A 227 SPGSLTKDVPVIVMNGLSKVYF--ATGWRLGYMYFVDPENKLSEVREAIDRLA--------------------------- 277 (406)
T ss_dssp CHHHHCSSSCEEEEEESTTTTC--CGGGCCEEEEEECTTCTTHHHHHHHHHHH---------------------------
T ss_pred CHHHcCCCceEEEEeccccccC--CCccEEEEEEEecCchhHHHHHHHHHHHH---------------------------
Confidence 2221 355 899999999999 557 89999 565 3333221100
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
.. + + +.+.+...++. ++|+... .+++.+.+
T Consensus 278 ----------~~-~--~------------~~~~~~~~a~~------------------------~~l~~~~-~~~~~~~~ 307 (406)
T 1xi9_A 278 ----------RI-R--L------------CPNTPAQFAAI------------------------AGLTGPM-DYLKEYMK 307 (406)
T ss_dssp ----------HH-T--C------------CSCSHHHHHHH------------------------HHHHSCC-HHHHHHHH
T ss_pred ----------Hh-h--c------------CCCHHHHHHHH------------------------HHHhCCc-HHHHHHHH
Confidence 00 0 0 01111112221 4443211 13677888
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEE-EEccCCCCccCHHHHH-HHHHhCCcEEccCccCCh
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAF-NVFDWKREKIEPVLVQ-KLADRENISLSYGSLHHI 546 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaF-nv~~~~G~~i~~~~V~-kla~~~gI~lr~G~~c~~ 546 (632)
+.+.+.+++.+.|.++ |.++++.|. ++.+.+ .+.+..| .+...+. ++++++||.++.|..|..
T Consensus 308 ~~~~~~~~l~~~L~~~--------~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~l~~~l~~~~gi~v~~g~~f~~ 372 (406)
T 1xi9_A 308 KLKERRDYIYKRLNEI--------PGISTTKPQ-----GAFYIFPKIEVGPW--KNDKEFVLDVLHNAHVLFVHGSGFGE 372 (406)
T ss_dssp HHHHHHHHHHHHHHTS--------TTEECCCCC-----BSSEECCEECSCSC--SSHHHHHHHHHHHHCEECEEGGGGCG
T ss_pred HHHHHHHHHHHHHHhC--------CCCeeecCC-----eeEEEEEecCccCC--CCHHHHHHHHHHhCCEEEeCchhcCC
Confidence 8999999999999886 567766542 444433 4442101 3455554 555688999987743321
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||+|++ ++.+||+++++.|+++++.
T Consensus 373 ----------------------------------~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 373 ----------------------------------YGAGHFRAVFL--PPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp ----------------------------------GGTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 02368999998 9999999999999998764
No 111
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.86 E-value=2.6e-20 Score=206.68 Aligned_cols=364 Identities=11% Similarity=0.083 Sum_probs=219.3
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccch-hHHHHHHHHHHHHHcCCCCCCc-cE
Q 006746 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE-SGLESAMKKRIMDFLNISENDY-GM 192 (632)
Q Consensus 115 ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~-~~~~~~~R~~ia~~l~a~~~ey-~v 192 (632)
++-.+.|+.|++++...+... |..+||.+.+..|... ..+.+.+|++++++||++.+++ ..
T Consensus 61 as~n~~~~~V~eA~~~~l~~~-----------------y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~ 123 (490)
T 2a7v_A 61 ASENFCSRAALEALGSCLNNK-----------------YSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVN 123 (490)
T ss_dssp TTCCCCCHHHHHHHTSGGGTC-----------------CCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEE
T ss_pred CCCCCCCHHHHHHHHHHHcCC-----------------CccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceE
Confidence 677788999999987655321 1225666664323332 3555689999999999987555 45
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhH-HHHH--HHHhcCCE--EEEEeccCCccccCHHHHHHHHHhc
Q 006746 193 VFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVE-AMIR--TSEKRGAR--VMSAEFSWPRLRINSEKLRKMVVSK 266 (632)
Q Consensus 193 vft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~-~~~~--~a~~~G~~--v~~v~~~~~~~~i~~~~l~~~i~~~ 266 (632)
|++.|+|.|+..+..++ .++||+|++ ...|.+.... .+.. .....|.. +..+++++.++.+|.++|++++.+.
T Consensus 124 v~~~sGt~An~~al~al-~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~ 202 (490)
T 2a7v_A 124 VQPYSGSPANLAVYTAL-LQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF 202 (490)
T ss_dssp CCCSSHHHHHHHHHHHH-CCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHH
T ss_pred EeCCchHHHHHHHHHHH-cCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhc
Confidence 77779999999999998 799999764 3444321111 1100 11223443 3344455557889999999999753
Q ss_pred CcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC---CCCCCCCCCCCCcEEEEccccccCCCCC
Q 006746 267 GKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK---DMDSFGLSLVRPDFLICSFYQIFGENPS 342 (632)
Q Consensus 267 ~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~---~m~~ldls~~~~Df~~~S~hK~~G~~P~ 342 (632)
+ ++++++.... +|...|++ |.++|+++|+++++|++|++|. ...+..+. ++|++++|+||.++. |.
T Consensus 203 ~-----~klIi~~~s~--~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l~G-p~ 272 (490)
T 2a7v_A 203 R-----PRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTLRG-AR 272 (490)
T ss_dssp C-----CSEEEECCSS--CCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGGCS-CS
T ss_pred C-----CcEEEEcCCC--CCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccCcc-cc
Confidence 2 4777765443 46778999 9999999999999999986531 00122222 689999999996643 88
Q ss_pred ceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccc
Q 006746 343 GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 422 (632)
Q Consensus 343 G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~ 422 (632)
| |+++.+++... ..+. . |. .. ++ ++. ..+. .. -|.+ ..|+++..
T Consensus 273 G-G~i~~~~~~~~-~~~~-~-~~-~~------~~--------~l~-----~~i~---~~--~~~g-------~qggp~~~ 316 (490)
T 2a7v_A 273 S-GLIFYRKGVKA-VDPK-T-GR-EI------PY--------TFE-----DRIN---FA--VFPS-------LQGGPHNH 316 (490)
T ss_dssp C-EEEEEECSEEE-EETT-T-EE-EE------EC--------CCH-----HHHH---HH--HTTT-------TCCSCCHH
T ss_pred c-hheeeccchhc-cccc-c-cc-hh------hH--------HHH-----HHHH---HH--hccc-------CCCCchHH
Confidence 7 99999886431 1110 0 00 00 00 000 0000 00 0000 13456666
Q ss_pred hhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCC
Q 006746 423 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI 502 (632)
Q Consensus 423 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~ 502 (632)
.+.++. .|+..+..-+++...+++...+++|.+.|.++ | +++..+.
T Consensus 317 ~iaAla------------------------~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~------G---~~v~~~~- 362 (490)
T 2a7v_A 317 AIAAVA------------------------VALKQACTPMFREYSLQVLKNARAMADALLER------G---YSLVSGG- 362 (490)
T ss_dssp HHHHHH------------------------HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT------T---CEEGGGS-
T ss_pred HHHHHH------------------------HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc------C---cEEecCC-
Confidence 677775 67776654345778889999999999999987 5 3444321
Q ss_pred CCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCC
Q 006746 503 RFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLG 582 (632)
Q Consensus 503 ~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 582 (632)
....++.+.+.+. | ++...+.+++++.||.+..+.. ++ + .....
T Consensus 363 --t~t~lv~vdl~~~-g--~~~~~~~~~L~~~GI~v~~~~~--p~--------------------d---------~~p~~ 406 (490)
T 2a7v_A 363 --TDNHLVLVDLRPK-G--LDGARAERVLELVSITANKNTC--PG--------------------D---------RSAIT 406 (490)
T ss_dssp --CSSSEEEEECTTT-T--CCHHHHHHHHHHTTEECEEECC--TT--------------------C---------CCSSS
T ss_pred --CCCeEEEEEeCCC-C--CCHHHHHHHHHhCCeEEecCcc--CC--------------------C---------CCCCC
Confidence 1246676766542 2 6778888888889999864421 10 0 01223
Q ss_pred CcEEEEccCC----CCCHHHHHHHHHHHHHhhhh
Q 006746 583 ITVVTASLGY----LANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 583 ~~~VRvSlg~----~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.||+++.. ..+.+|+++++++|.+.|+.
T Consensus 407 ~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 407 PGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp CSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 5689997644 45899999999999998763
No 112
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.86 E-value=4.2e-20 Score=199.27 Aligned_cols=302 Identities=13% Similarity=0.107 Sum_probs=205.6
Q ss_pred HHHHHHHHHHcC------------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcC
Q 006746 173 SAMKKRIMDFLN------------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRG 239 (632)
Q Consensus 173 ~~~R~~ia~~l~------------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G 239 (632)
.+.|+.|+++++ ++++ .|++|+|+|+|+.+++.++ .++||+|++ ...|++ + ...++..|
T Consensus 78 ~~lr~~la~~~~~~~~~~~~~~~~~~~~--~v~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~--~---~~~~~~~g 149 (416)
T 1bw0_A 78 PEAREAVATWWRNSFVHKEELKSTIVKD--NVVLCSGGSHGILMAITAI-CDAGDYALVPQPGFPH--Y---ETVCKAYG 149 (416)
T ss_dssp HHHHHHHHHHHHHHHCCSTTTGGGCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH--H---HHHHHHTT
T ss_pred HHHHHHHHHHHHhhhcccccCCCCCCcc--eEEEeCChHHHHHHHHHHh-CCCCCEEEEcCCCcHh--H---HHHHHHcC
Confidence 478888998888 5554 7999999999999999998 688999765 456664 2 33567789
Q ss_pred CEEEEEeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC--
Q 006746 240 ARVMSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG-- 312 (632)
Q Consensus 240 ~~v~~v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~-- 312 (632)
++++.++.+.. ...+|+++|+++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++..
T Consensus 150 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 223 (416)
T 1bw0_A 150 IGMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMV 223 (416)
T ss_dssp CEEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCB
T ss_pred cEEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999998632 2458999999988653 488999999999999999 88 89999999999999998775
Q ss_pred --CC----CCCCC-CCCCCCCcEEEEccccccCCCCCc--eEEEEEeCC--CccccCCCCCCCceeeccccccccccccc
Q 006746 313 --PK----DMDSF-GLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKS--TVPILVDNTSSGMVSLLPAKKQLWLTDEF 381 (632)
Q Consensus 313 --g~----~m~~l-dls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~--~~~~L~~~~~gG~v~~~~~~~~~~~~~~~ 381 (632)
+. ...++ .+...+.++++.|++|.||. .| +|+++++++ .++.+....
T Consensus 224 ~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--~Glr~G~~~~~~~~~~~~~~~~~~-------------------- 281 (416)
T 1bw0_A 224 FKGKDPNATFTSVADFETTVPRVILGGTAKNLVV--PGWRLGWLLYVDPHGNGPSFLEGL-------------------- 281 (416)
T ss_dssp CCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSC--GGGCCEEEEEECTTCSCHHHHHHH--------------------
T ss_pred cCCCCCCCCccCHHHccCCCcEEEEecchhhCCC--CCceEEEEEeeCchhhHHHHHHHH--------------------
Confidence 22 11111 22222345888999999884 36 799998874 433221100
Q ss_pred CCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh
Q 006746 382 SSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL 461 (632)
Q Consensus 382 ~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~ 461 (632)
..+. .. .++.+.+...++. ++|+.....
T Consensus 282 -----------~~~~---~~--------------~~~~~~~~~~a~~------------------------~~l~~~~~~ 309 (416)
T 1bw0_A 282 -----------KRVG---ML--------------VCGPCTVVQAALG------------------------EALLNTPQE 309 (416)
T ss_dssp -----------HHHH---HH--------------HTCSCHHHHHHHH------------------------HHHHSSCHH
T ss_pred -----------HHHh---cc--------------ccCCCcHHHHHHH------------------------HHHhcccHH
Confidence 0000 00 0111222222222 444432233
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC-CCccCHHHH-HHHHHhCCcEEc
Q 006746 462 GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK-REKIEPVLV-QKLADRENISLS 539 (632)
Q Consensus 462 Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~-G~~i~~~~V-~kla~~~gI~lr 539 (632)
+++.+.++.+.+.+++.+.|.++ |.++++.|. .+..+.+.+...+ +...+...+ +++++++||.++
T Consensus 310 ~~~~~~~~~~~~~~~l~~~L~~~--------~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 377 (416)
T 1bw0_A 310 HLDQIVAKIEESAMYLYNHIGEC--------IGLAPTMPR----GAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVL 377 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS--------TTEEECCCC----BTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC--------CCCcccCCC----eeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEe
Confidence 57788889999999999999876 567776552 3555666664210 001244444 556678899998
Q ss_pred cCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 540 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 540 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.|..|. ..+.||+|++ ++.+|+++.++.|+++++.
T Consensus 378 ~g~~f~------------------------------------~~~~iRis~~--~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 378 PGTIFH------------------------------------APGFTRLTTT--RPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp EGGGGT------------------------------------CTTEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred cccccC------------------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 763221 1358999996 6899999999999988754
No 113
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.86 E-value=2.5e-20 Score=203.40 Aligned_cols=351 Identities=13% Similarity=0.125 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC--------CCCCCeEEEe-ccccchhhHHHHHHHHhcCC
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP--------FMSVKNLLTV-YDYESEAVEAMIRTSEKRGA 240 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~--------~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~ 240 (632)
..+.+.|+++++++|++ .++|++|+|+|+.+++.++. +++|++|++. .+|++ .. ..++..|+
T Consensus 62 ~~~~~l~~~la~~~g~~----~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~-~~----~~~~~~g~ 132 (437)
T 3bb8_A 62 RFNDAFEKKLGEYLGVP----YVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPT-TV----NPTIQNGL 132 (437)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHH-HH----HHHHHTTC
T ss_pred hHHHHHHHHHHHHHCCC----cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHH-HH----HHHHHcCC
Confidence 45679999999999986 48899999999999999985 7889997754 56765 22 23456899
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCC
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSF 319 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~l 319 (632)
+++.+++++.++.+|+++|+++|+++ +++|++++ .+|...|++ |.++|+++|+++++|++|+.|.. .
T Consensus 133 ~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~--~- 200 (437)
T 3bb8_A 133 IPVFVDVDIPTYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGST--Y- 200 (437)
T ss_dssp EEEECCEETTTTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCE--E-
T ss_pred EEEEEeccCccCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCce--E-
Confidence 99999987446788999999988653 58888876 578889999 99999999999999999998752 2
Q ss_pred CCCCCC--CcEEEEccccccCCCCCce-EEEEEeCCCcccc-CC-CCCC-C-----ceeecccccccccccccCCCCCCc
Q 006746 320 GLSLVR--PDFLICSFYQIFGENPSGF-GCLFVKKSTVPIL-VD-NTSS-G-----MVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 320 dls~~~--~Df~~~S~hK~~G~~P~G~-G~L~Vr~~~~~~L-~~-~~~g-G-----~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
+...++ +|++++|++|.++. |.|. |+++.+++.+..+ .. ..+| + ....+. ... + .....
T Consensus 201 ~~~~~~~~~d~~~~s~~~~k~l-~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~------~~~~~- 270 (437)
T 3bb8_A 201 DGKMAGTFGDIGTVSFYPAKHI-TMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTC-KKR-F------GQQLG- 270 (437)
T ss_dssp TTEETTSSSSEEEEECSTTSSS-CCSSCEEEEESCHHHHHHHHHHHBTTBCC------------------------CCS-
T ss_pred CCeecccccCEEEEECcCCcCC-CCCCeEEEEeCCHHHHHHHHHHHHhCccccccccccccc-ccc-c------ccccc-
Confidence 444445 79999997765555 4455 4444444443322 11 0111 1 000000 000 0 00000
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
..+.++. +.+|+...+. ..++.++... .++..++.+ +...+
T Consensus 271 -~~~~~~~--~~~~~~~~g~------~~~~~~~~aa----------------------------~~l~~l~~~--~~~~~ 311 (437)
T 3bb8_A 271 -SLPFGYD--HKYTYSHLGY------NLKITDMQAA----------------------------CGLAQLERI--EEFVE 311 (437)
T ss_dssp -CCCTTCC--GGGCBCSCCC------BCCCBHHHHH----------------------------HHHHHHHHH--HHHHH
T ss_pred -ccccccc--ccccccccCc------ccCCCHHHHH----------------------------HHHHHHHHH--HHHHH
Confidence 0000010 1222211110 0011122222 233333322 34445
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCc--EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCcc--C
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGP--ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSL--H 544 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~--ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~--c 544 (632)
+.+.+.+++.+.|.++ +.+.++.........+ ++.+.+....| ++...+.+.+.++||.++.++. |
T Consensus 312 ~~~~~~~~l~~~L~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~GI~v~~~~~~~~ 381 (437)
T 3bb8_A 312 KRKANFKYLKDALQSC--------ADFIELPEATENSDPSWFGFPITLKEDSG--VSRIDLVKFLDEAKVGTRLLFAGNL 381 (437)
T ss_dssp HHHHHHHHHHHHGGGG--------TTTEECCCCCTTEECCCSSEEEEECGGGS--SCHHHHHHHHHHTTBCCBCCTTSSG
T ss_pred HHHHHHHHHHHHhhcc--------CCccccCCCCCCCceeeEEEEEEECCcCc--CcHHHHHHHHHHCCCceeccCCccc
Confidence 5588999999999887 4444553211111112 22333332112 5677888877788999998864 3
Q ss_pred ChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhcc
Q 006746 545 HIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADF 614 (632)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~f 614 (632)
+..- .+.......+.+ +... .....+.||+|+|.++|.+||+++++.|++++..-|
T Consensus 382 ~~~p--~~~~~~~~~~~~---~~~~---------~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~~~~ 437 (437)
T 3bb8_A 382 TRQP--YFHDVKYRVVGE---LTNT---------DRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFGLNF 437 (437)
T ss_dssp GGSG--GGSSCCCEECSC---CHHH---------HHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTTTTC
T ss_pred ccCc--hhhccCccccCC---CcHH---------HHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHcccC
Confidence 3110 000000000000 0000 001235899999999999999999999999877543
No 114
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.86 E-value=9.7e-20 Score=197.23 Aligned_cols=169 Identities=12% Similarity=0.051 Sum_probs=134.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
...+++.|++|++++|++ ++++++++++|+.+++.++ +++||+|++. ..|++ ....+...++..|++++.++.
T Consensus 61 ~~~~~~l~~~ia~~~g~~----~~i~~~~g~~ai~~~~~~l-~~~gd~Vl~~~~~y~~-~~~~~~~~~~~~g~~~~~v~~ 134 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTE----ACVATSSGMGAIAATVLTI-LKAGDHLISDECLYGC-THALFEHALTKFGIQVDFINT 134 (404)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEESCCCHH-HHHHHHTHHHHTTCEEEEECT
T ss_pred ChHHHHHHHHHHHHhCCC----cEEEeCChHHHHHHHHHHH-hCCCCEEEEeCCCchh-HHHHHHHHHHHcCCEEEEECC
Confidence 456779999999999985 4666777789999999988 6899997755 46664 333333356778999999886
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh-CCcEEEEeccccCCCCCCCCCCCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE-NDWHILIDACALGPKDMDSFGLSLVR 325 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~-~g~~vlvDaaq~~g~~m~~ldls~~~ 325 (632)
+ |.++|+++|+++ ++++++++.+|+||..+|++ |+++|++ +|+++++|.++..+..-.++ .++
T Consensus 135 ~------d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~---~~~ 199 (404)
T 1e5e_A 135 A------IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV---DFG 199 (404)
T ss_dssp T------STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG---GGT
T ss_pred C------CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc---ccC
Confidence 4 567888888653 58999999999999999999 9999999 99999999999876521233 257
Q ss_pred CcEEEEccccccCCCCCc--eEEEEEeCCCcc-ccCC
Q 006746 326 PDFLICSFYQIFGENPSG--FGCLFVKKSTVP-ILVD 359 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~-~L~~ 359 (632)
.|+++.|++|+||. |.+ .|+++++++.+. .+.+
T Consensus 200 ~di~~~S~sK~~~~-~g~ri~G~~~~~~~~~~~~l~~ 235 (404)
T 1e5e_A 200 VDVVVHSATKYING-HTDVVAGLICGKADLLQQIRMV 235 (404)
T ss_dssp CSEEEEETTTTTTC-SSCCCCEEEEECHHHHHHHHHT
T ss_pred CEEEEEcCccccCC-CCCCeEEEEEECHHHHHHHHHH
Confidence 89999999998885 655 699999987765 4543
No 115
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.86 E-value=1.7e-19 Score=191.81 Aligned_cols=283 Identities=9% Similarity=0.052 Sum_probs=202.3
Q ss_pred HHHHHHHHHH------cCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDF------LNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~------l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.++++ ++++++ .|+||+|+|+|+.+++.++ .++||+|++ ...|++ + ...++..|++++.+
T Consensus 72 ~~l~~~la~~l~~~~g~~~~~~--~v~~~~G~~~al~~~~~~l-~~~gd~Vl~~~~~y~~--~---~~~~~~~g~~~~~v 143 (369)
T 3cq5_A 72 VELRDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAF-GGPGRTALGFQPSYSM--H---PILAKGTHTEFIAV 143 (369)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHH-CSTTCEEEEEESSCTH--H---HHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhhhhcccCCCChH--hEEECCChHHHHHHHHHHh-cCCCCEEEEcCCChHH--H---HHHHHHcCCEEEEe
Confidence 3678888887 566654 7999999999999999998 688999765 456664 2 23456789999999
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC-CCCCCC-C
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-MDSFGL-S 322 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-m~~ldl-s 322 (632)
+.+ +++.+++++|++++++. +++++++++.+|+||..+|++ +.++++..++++++|.++..+.. ...+++ .
T Consensus 144 ~~~-~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~ 217 (369)
T 3cq5_A 144 SRG-ADFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLE 217 (369)
T ss_dssp ECC-TTSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTT
T ss_pred cCC-cCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHh
Confidence 986 45578999999999761 247888999999999999999 99999999999999999876431 011332 2
Q ss_pred CCC-CcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 323 LVR-PDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 323 ~~~-~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
.++ .++++.|++|++| +.| +|+++++++.++.+..... .|.
T Consensus 218 ~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~------------~~~---------------------- 261 (369)
T 3cq5_A 218 KYPTKLVVSRTMSKAFD--FAGGRLGYFVANPAFIDAVMLVRL------------PYH---------------------- 261 (369)
T ss_dssp TCTTTEEEEEESSSTTS--CGGGCCEEEEECTHHHHHHHTTSC------------TTC----------------------
T ss_pred hCCCCEEEEEechHhcC--CcccceEEEEeCHHHHHHHHHcCC------------CCC----------------------
Confidence 345 6799999999998 346 6999998876554432110 010
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
.+.+...++. ++|+.. ..++.+.++.+.+.++|.+
T Consensus 262 -------------------~~~~~~~a~~------------------------~~l~~~--~~~~~~~~~~~~~~~~l~~ 296 (369)
T 3cq5_A 262 -------------------LSALSQAAAI------------------------VALRHS--ADTLGTVEKLSVERVRVAA 296 (369)
T ss_dssp -------------------SCHHHHHHHH------------------------HHHHTH--HHHHTHHHHHHHHHHHHHH
T ss_pred -------------------CCHHHHHHHH------------------------HHhcCH--HHHHHHHHHHHHHHHHHHH
Confidence 0001111111 344432 1367778889999999999
Q ss_pred HHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhh
Q 006746 480 ALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 559 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~ 559 (632)
.|.++ | ++++.+ .+.++.+.+. .+...+.+.+.++||.++.|.
T Consensus 297 ~L~~~------g---~~~~~~-----~~~~~~~~~~------~~~~~l~~~l~~~gi~v~~~~----------------- 339 (369)
T 3cq5_A 297 RLEEL------G---YAVVPS-----ESNFVFFGDF------SDQHAAWQAFLDRGVLIRDVG----------------- 339 (369)
T ss_dssp HHHHH------T---CEEECC-----SSSEEEEECC------SSHHHHHHHHHHTTEECBCCS-----------------
T ss_pred HHHhC------C---CEECCC-----CCeEEEEECC------CCHHHHHHHHHHCCEEEEECC-----------------
Confidence 99876 4 455522 4677777654 245566666678899987540
Q ss_pred hhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 560 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 560 l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||+|++ +.+|++++++.|+++++.
T Consensus 340 ----------------------~~~~iRis~~---~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 340 ----------------------IAGHLRTTIG---VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp ----------------------CTTEEEEECC---CHHHHHHHHHHHHHHHTT
T ss_pred ----------------------CCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 1258999998 899999999999998754
No 116
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.86 E-value=4e-20 Score=196.20 Aligned_cols=283 Identities=10% Similarity=0.065 Sum_probs=196.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC-CeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSV-KNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~g-d~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
.+.|++|+++++++++ .|++|+|+|+++.+++.++ .++| |+|++. ..|++ + ...++..|++++.++.+ +
T Consensus 61 ~~lr~~la~~~~~~~~--~v~~~~G~~~ai~~~~~~~-~~~g~d~Vl~~~p~~~~--~---~~~~~~~g~~~~~v~~~-~ 131 (356)
T 1fg7_A 61 KAVIENYAQYAGVKPE--QVLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYGM--Y---SVSAETIGVECRTVPTL-D 131 (356)
T ss_dssp HHHHHHHHHHHTSCGG--GEEEESHHHHHHHHHHHHH-CCTTTCEEEECSSSCTH--H---HHHHHHHTCEEEECCCC-T
T ss_pred HHHHHHHHHHhCCChH--HEEEcCCHHHHHHHHHHHH-hCCCCCEEEEeCCChHH--H---HHHHHHcCCEEEEeeCC-C
Confidence 5899999999999865 7999999999999999998 6789 897765 45553 1 33456689999999886 4
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HH---HHHhhCCcEEEEeccccCCCC-CCCCCC-CCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WM---RIAQENDWHILIDACALGPKD-MDSFGL-SLV 324 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~---~~a~~~g~~vlvDaaq~~g~~-m~~ldl-s~~ 324 (632)
++.+|+++++++++ + ++++++++.+|+||..+|.+ +. +.|+ +|+++++|.++..... ...+++ ..+
T Consensus 132 ~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~ 203 (356)
T 1fg7_A 132 NWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEY 203 (356)
T ss_dssp TSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTC
T ss_pred CCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhC
Confidence 55689999887765 3 58999999999999999976 54 4555 8999999999774221 011222 345
Q ss_pred CCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccc
Q 006746 325 RPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 402 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt 402 (632)
+.++++.|++|+|| +.| +|+++++++.++.+.... ..|.
T Consensus 204 ~~~i~~~s~sK~~g--~~G~r~G~~~~~~~~~~~l~~~~------------~~~~------------------------- 244 (356)
T 1fg7_A 204 PHLAILRTLSKAFA--LAGLRCGFTLANEEVINLLMKVI------------APYP------------------------- 244 (356)
T ss_dssp TTEEEEEESSSTTC--CGGGCCEEEEECHHHHHHHHHHS------------CSSC-------------------------
T ss_pred CCEEEEecchHhhc--CchhhhEEEEeCHHHHHHHHHhc------------CCCC-------------------------
Confidence 67899999999999 457 699999877655443210 0010
Q ss_pred cCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Q 006746 403 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 482 (632)
Q Consensus 403 ~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~ 482 (632)
.+.+...+.. ++|+......++.+.++.+.+.++|.+.|.
T Consensus 245 ----------------~~~~~~~a~~------------------------~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 284 (356)
T 1fg7_A 245 ----------------LSTPVADIAA------------------------QALSPQGIVAMRERVAQIIAEREYLIAALK 284 (356)
T ss_dssp ----------------SCHHHHHHHH------------------------HHTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------CCHHHHHHHH------------------------HHhcCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111111 333221100167778888999999999999
Q ss_pred ccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEcc-CccCChHHHhHHHHhhhhhhh
Q 006746 483 KLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSY-GSLHHIWFSDKYQKEKDNVLE 561 (632)
Q Consensus 483 ~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~-G~~c~~~~~~~~~~~~~~~l~ 561 (632)
++ +.+..+.|. .+..+.+.+. +...+.+.+.++||.++. |..|.
T Consensus 285 ~~--------~~~~~~~~~----~~~~~~~~~~-------~~~~l~~~L~~~gI~v~~~g~~~~---------------- 329 (356)
T 1fg7_A 285 EI--------PCVEQVFDS----ETNYILARFK-------ASSAVFKSLWDQGIILRDQNKQPS---------------- 329 (356)
T ss_dssp HS--------TTEEEECCC----SSSEEEEEET-------THHHHHHHHHHTTEECEECTTSTT----------------
T ss_pred hC--------CCceEECCC----CCeEEEEECC-------CHHHHHHHHHHCCEEEEECCCCCC----------------
Confidence 87 334334442 4667766664 244555555788999986 64321
Q ss_pred hhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 562 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
..+.||+|++ +.+|++++++.|+++
T Consensus 330 --------------------~~~~iRis~~---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 330 --------------------LSGCLRITVG---TREESQRVIDALRAE 354 (356)
T ss_dssp --------------------CTTEEEEECC---CHHHHHHHHHHHHTC
T ss_pred --------------------CCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 1248999987 699999999999865
No 117
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.85 E-value=2e-20 Score=200.54 Aligned_cols=305 Identities=12% Similarity=0.088 Sum_probs=206.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCC-ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 169 SGLESAMKKRIMDFLNISEND-YGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~e-y~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.++.+++++.+++++|.+.+. ..|+||+|+|+|+.+++.++ +++||+|++. ..|++ ....++..|++++.++
T Consensus 81 ~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~-----~~~~~~~~g~~~~~~~ 154 (407)
T 3nra_A 81 LGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFA-----NRKLVEFFEGEMVPVQ 154 (407)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTT-CCTTCEEEEEESCCTH-----HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh-CCCCCEEEEcCCcccc-----hHHHHHHcCCEEEEee
Confidence 467788889999999985321 37999999999999999998 7899997754 45553 2345677899999999
Q ss_pred ccC-----CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----C
Q 006746 247 FSW-----PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----P 313 (632)
Q Consensus 247 ~~~-----~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g 313 (632)
.+. .++.+++++|++++.++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++.. +
T Consensus 155 ~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g 228 (407)
T 3nra_A 155 LDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAG 228 (407)
T ss_dssp BCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTT
T ss_pred cccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCC
Confidence 831 45678999999999864 488999999999999999 88 88999999999999999876 2
Q ss_pred CCCCC---CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccc
Q 006746 314 KDMDS---FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 314 ~~m~~---ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
....+ ++....+.++++.|++|.+|.+..++|+++.++++++.+..... .|
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~------------~~-------------- 282 (407)
T 3nra_A 229 ASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQA------------IV-------------- 282 (407)
T ss_dssp CCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHH------------HH--------------
T ss_pred CCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHh------------hh--------------
Confidence 21111 11023456799999999998422346888877665544432100 00
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 470 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~ 470 (632)
..+ .+.+...++. .+|+.. ...++...++.
T Consensus 283 ---------~~~----------------~~~~~~~a~~------------------------~~l~~~-~~~~~~~~~~~ 312 (407)
T 3nra_A 283 ---------SLR----------------AAGYSQAVLR------------------------GWFDEA-PGWMEDRIARH 312 (407)
T ss_dssp ---------TSS----------------SCHHHHGGGG------------------------GTTCCC-TTHHHHHHHHH
T ss_pred ---------ccC----------------CChHHHHHHH------------------------HHHhcc-chHHHHHHHHH
Confidence 000 0000011111 222110 01256677888
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHH-HHHHhCCcEEccCccCChHHH
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQ-KLADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~-kla~~~gI~lr~G~~c~~~~~ 549 (632)
+.+.++|.+.|.++ |.++++.|. .+..+.+.+.+. .++...+. +|++++||.++.|..|.+
T Consensus 313 ~~~~~~l~~~L~~~--------~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~~--- 374 (407)
T 3nra_A 313 QAIRDELLHVLRGC--------EGVFARTPQ----AGSYLFPRLPKL---AVAPAEFVKILRLQAGVVVTPGTEFSP--- 374 (407)
T ss_dssp HHHHHHHHHHHHTS--------TTCBCCCCS----BSSEECCBCCCB---SSCHHHHHHHHHHHHCEECEEGGGTCT---
T ss_pred HHHHHHHHHHHhcC--------CCceeccCC----eeEEEEEeCCCC---CCCHHHHHHHHHHhCCEEEeCchhhCC---
Confidence 88999999999876 446555542 233443333321 14555555 455678999998865542
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||+|++. +.+||+++++.|+++++.
T Consensus 375 -------------------------------~~~~~iRis~~~--~~~~i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 375 -------------------------------HTADSVRLNFSQ--DHEAAVAAARRIVTLVER 404 (407)
T ss_dssp -------------------------------TCTTBEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCCEEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 134699999984 999999999999988753
No 118
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.85 E-value=1.2e-20 Score=202.46 Aligned_cols=301 Identities=14% Similarity=0.105 Sum_probs=204.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPR 251 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~ 251 (632)
.+.|+.+++++|++++ .|++|+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.++.+ ++
T Consensus 77 ~~l~~~la~~~g~~~~--~v~~~~g~~~al~~~~~~~-~~~gd~Vl~~~p~y~~-----~~~~~~~~g~~~~~~~~~-~~ 147 (397)
T 2zyj_A 77 APLRAFVAEWIGVRPE--EVLITTGSQQALDLVGKVF-LDEGSPVLLEAPSYMG-----AIQAFRLQGPRFLTVPAG-EE 147 (397)
T ss_dssp HHHHHHHHHHHTSCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH-----HHHHHHTTCCEEEEEEEE-TT
T ss_pred HHHHHHHHHHhCCChh--hEEEeccHHHHHHHHHHHh-CCCCCEEEEeCCCcHH-----HHHHHHHcCCEEEecCcC-CC
Confidence 5789999999998765 7999999999999999998 6789997654 45553 234466789999999987 34
Q ss_pred cccCHHHHHHHHHhcCcCCCceeEE-EEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCC--CCCCCCCCC
Q 006746 252 LRINSEKLRKMVVSKGKKKKQRGLF-VFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKD--MDSFGLSLV 324 (632)
Q Consensus 252 ~~i~~~~l~~~i~~~~~~~~~~~Lv-~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~--m~~ldls~~ 324 (632)
+ +++++|++++++. +++++ ++++.+|+||..+|.+ |+++|+++|+++++|.++....- ....++..+
T Consensus 148 ~-~d~~~l~~~l~~~-----~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 221 (397)
T 2zyj_A 148 G-PDLDALEEVLKRE-----RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL 221 (397)
T ss_dssp E-ECHHHHHHHHHHC-----CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHH
T ss_pred C-CCHHHHHHHHhhc-----CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhh
Confidence 4 8999999999862 23666 6799999999999864 77889999999999999876320 012333333
Q ss_pred CC------cEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhh
Q 006746 325 RP------DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 398 (632)
Q Consensus 325 ~~------Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~ 398 (632)
++ ++++.|++|++| +..++|+++++++.++.+..... .|
T Consensus 222 ~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~------------~~---------------------- 266 (397)
T 2zyj_A 222 AREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQ------------GA---------------------- 266 (397)
T ss_dssp HHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHH------------HH----------------------
T ss_pred CcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHH------------hh----------------------
Confidence 33 389999999999 32357999988766544432100 00
Q ss_pred hccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHH
Q 006746 399 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLV 478 (632)
Q Consensus 399 e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~ 478 (632)
..++ +.+...++. ++|+......++.+.++.+...++|.
T Consensus 267 ~~~~-----------------~~~~~~a~~------------------------~~l~~~~~~~~~~~~~~~~~~~~~l~ 305 (397)
T 2zyj_A 267 DLHT-----------------PMLNQMLVH------------------------ELLKEGFSERLERVRRVYREKAQAML 305 (397)
T ss_dssp HSSC-----------------CHHHHHHHH------------------------HHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-----------------CHHHHHHHH------------------------HHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 0011 001111111 23321100125677778888888999
Q ss_pred HHHHccCCCCCCCCC-cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhh
Q 006746 479 NALMKLQHPNTEGNA-LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 557 (632)
Q Consensus 479 ~~L~~l~h~~~~G~p-~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~ 557 (632)
+.|.++ .| .++++.|. .+..+.+.+.+ + ++...+.+.+.++||.++.|..|...
T Consensus 306 ~~L~~~-------~~~g~~~~~~~----~g~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~g~~f~~~---------- 360 (397)
T 2zyj_A 306 HALDRE-------VPKEVRYTRPK----GGMFVWMELPK--G--LSAEGLFRRALEENVAFVPGGPFFAN---------- 360 (397)
T ss_dssp HHHHHH-------SCTTSEECCCS----BSSEEEEECST--T--CCHHHHHHHHHHTTEEEEESGGGCTT----------
T ss_pred HHHHHH-------CCCCeEEccCC----ccEEEEEEcCC--C--CCHHHHHHHHHHCCCEEechHHhcCC----------
Confidence 998874 14 36665552 45667676653 1 45666665555669999887543320
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+.||+|++.. +.+||+++++.|+++++.
T Consensus 361 ----------------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 361 ----------------------GGGENTLRLSYATL-DREGIAEGVRRLGRALKG 392 (397)
T ss_dssp ----------------------SCCTTEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHH
Confidence 11346999999986 999999999999988754
No 119
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.85 E-value=1.7e-20 Score=217.24 Aligned_cols=318 Identities=11% Similarity=0.001 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+.++++.+++++|++. .+++++++|+|+.+++.++ .++||+|++. ..|.| .... .++..|++++.++..
T Consensus 173 ~~i~e~e~~lA~~~gae~---~i~v~nGtt~an~~ai~al-~~pGD~VLv~~~~H~S-~~~~---~~~l~Ga~~v~v~~~ 244 (730)
T 1c4k_A 173 GPAVAAEKHAARVYNADK---TYFVLGGSSNANNTVTSAL-VSNGDLVLFDRNNHKS-VYNS---ALAMAGGRPVYLQTN 244 (730)
T ss_dssp THHHHHHHHHHHHTTCSE---EEEESSHHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HHHH---HTTTTCCEEEEECEE
T ss_pred HHHHHHHHHHHHHHCCCc---EEEECCHHHHHHHHHHHHh-cCCCCEEEEcCCchHH-HHHH---HHHHCCCEEEEEeCC
Confidence 567899999999999963 5778888889999999998 7899998765 45654 2222 145679999988764
Q ss_pred CC----ccccCHHHH-----HHHHHhcCcC---C-CceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCC-
Q 006746 249 WP----RLRINSEKL-----RKMVVSKGKK---K-KQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGP- 313 (632)
Q Consensus 249 ~~----~~~i~~~~l-----~~~i~~~~~~---~-~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g- 313 (632)
.. .+.+|.++| +++|.++... . ..++++++++. |.+|...|++ |+++|+++|+++++|+|+..+
T Consensus 245 ~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~ 323 (730)
T 1c4k_A 245 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYE 323 (730)
T ss_dssp ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGG
T ss_pred ccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEccccccc
Confidence 22 134677777 8877653100 0 11278888875 6899999999 999999999999999998642
Q ss_pred -CC-----CCCCCCCCCCCc----EEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 314 -KD-----MDSFGLSLVRPD----FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 314 -~~-----m~~ldls~~~~D----f~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
.. ..++++..+++| +++.|+||++|. |.+.|+++++++.+.. +. ..++.
T Consensus 324 ~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g-~~~gg~I~v~~~~l~g--~~---~~i~~--------------- 382 (730)
T 1c4k_A 324 QFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAG-FSQTSQIHKKDSHIKG--QL---RYCDH--------------- 382 (730)
T ss_dssp GSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSC-CTTCEEEEEECGGGTT--ST---TCCCH---------------
T ss_pred ccCcccCCcCcccccccCCCCCCEEEEECCCCCCCC-CCCEEEEEecchhhcC--cc---cccCH---------------
Confidence 10 124555556788 999999997775 8889999999876411 00 00000
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHh-hC
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDS-LG 462 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~-~G 462 (632)
..+.+.. ...+.++++.+.+.++. .|++++.. .|
T Consensus 383 ---------~~~~~~~------------~~~~stsp~~~~iaal~------------------------aA~~~l~~~~g 417 (730)
T 1c4k_A 383 ---------KHFNNSF------------NLFMSTSPFYPMYAALD------------------------VNAAMQEGEAG 417 (730)
T ss_dssp ---------HHHHHHH------------HHHSCSSCCHHHHHHHH------------------------HHHHHHSHHHH
T ss_pred ---------HHHHHHH------------HHhCCCCCcHHHHHHHH------------------------HHHHHHHhhhh
Confidence 0000000 00124556667777776 78877765 35
Q ss_pred HHHHHHHHHHHHHHHHHHHHc-cCCCCCCCCCcEEEECCCC--------------------------------CCCCCc-
Q 006746 463 LTMISRRGRCLINWLVNALMK-LQHPNTEGNALVKIYGPKI--------------------------------RFDRGP- 508 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~-l~h~~~~G~p~v~Iygp~~--------------------------------~~~rg~- 508 (632)
. ...++...++.++++.|.+ + +.+++++|.. .....+
T Consensus 418 ~-~~~~~~~~~a~~lr~~L~~~i--------~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 488 (730)
T 1c4k_A 418 R-KLWHDLLITTIEARKKLIKAG--------SMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQ 488 (730)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHTT--------CSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTC
T ss_pred H-HHHHHHHHHHHHHHHHHhhhC--------CCeEEccccccccccccccccccccccchhhccCccchhccccccCCcc
Confidence 4 4457889999999999988 5 5678887742 000011
Q ss_pred --E----EEEEEcc---CCC----CccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccc
Q 006746 509 --A----LAFNVFD---WKR----EKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNR 575 (632)
Q Consensus 509 --i----vaFnv~~---~~G----~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 575 (632)
+ |+|++++ .+| ..++...+.+.+.++||.++.
T Consensus 489 ~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~----------------------------------- 533 (730)
T 1c4k_A 489 YYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEK----------------------------------- 533 (730)
T ss_dssp EEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSE-----------------------------------
T ss_pred cccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEE-----------------------------------
Confidence 2 6777743 111 126788888877777887641
Q ss_pred cccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 576 KDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 576 ~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+.+.||++++..+|.+|+++|+++|+++..
T Consensus 534 -----~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~ 564 (730)
T 1c4k_A 534 -----SDLNSILFLMTPAETPAKMNNLITQLLQLQR 564 (730)
T ss_dssp -----ECSSEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 1346899999999999999999999998864
No 120
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.85 E-value=3e-19 Score=190.93 Aligned_cols=295 Identities=11% Similarity=0.083 Sum_probs=197.8
Q ss_pred HHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 175 MKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 175 ~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.|+.|++++ | ++++ .|+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.+|.
T Consensus 69 lr~~la~~l~~~~g~~~~~~--~v~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~-----~~~~~~~~g~~~~~v~~ 140 (390)
T 1d2f_A 69 FLAAIAHWFSTQHYTAIDSQ--TVVYGPSVIYMVSELIRQW-SETGEGVVIHTPAYDA-----FYKAIEGNQRTVMPVAL 140 (390)
T ss_dssp HHHHHHHHHHHHSCCCCCGG--GEEEESCHHHHHHHHHHHS-SCTTCEEEEEESCCHH-----HHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCcHH-----HHHHHHHCCCEEEEeec
Confidence 566666655 6 5444 7999999999999999998 6789997654 45553 23445678999999998
Q ss_pred cCCc--cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCC--CCCC
Q 006746 248 SWPR--LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKD--MDSF 319 (632)
Q Consensus 248 ~~~~--~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~--m~~l 319 (632)
++.. ..+++++|++++++. +++++++++.+|+||..+| ++ |+++|+++|+++++|.++..... ....
T Consensus 141 ~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 215 (390)
T 1d2f_A 141 EKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHI 215 (390)
T ss_dssp EECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCC
T ss_pred ccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCc
Confidence 6432 248999999999742 3588999999999999999 67 88999999999999999876310 0122
Q ss_pred CCCCCCC---cEEEEccccccCCCCCc--eEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 320 GLSLVRP---DFLICSFYQIFGENPSG--FGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 320 dls~~~~---Df~~~S~hK~~G~~P~G--~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
++..+.+ |. +.|++|++| +.| +|++++++ +.++.+.....|
T Consensus 216 ~~~~~~~~~~d~-~~s~sK~~~--~~G~r~G~~~~~~~~~~~~~~~~~~~------------------------------ 262 (390)
T 1d2f_A 216 PWSNVARGDWAL-LTSGSKSFN--IPALTGAYGIIENSSSRDAYLSALKG------------------------------ 262 (390)
T ss_dssp CGGGTCCSSEEE-EECSHHHHT--CGGGCCEEEEECSHHHHHHHHHHHHT------------------------------
T ss_pred CHHHcchhhHhh-ccCccHhhc--ccChhheEEEECCHHHHHHHHHHHhh------------------------------
Confidence 3332322 77 999999998 446 69999863 444333221000
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
+ ..+ ++.+.+...++. ++|+...+ .++.+.++.+.+
T Consensus 263 -------~-~~~-----------~~~~~~~~~a~~------------------------~~l~~~~~-~~~~~~~~~~~~ 298 (390)
T 1d2f_A 263 -------R-DGL-----------SSPSVLALTAHI------------------------AAYQQGAP-WLDALRIYLKDN 298 (390)
T ss_dssp -------T-SCC-----------CSCCHHHHHHHH------------------------HHHHHCHH-HHHHHHHHHHHH
T ss_pred -------h-ccc-----------CCCCHHHHHHHH------------------------HHHhcCHH-HHHHHHHHHHHH
Confidence 0 000 111222222222 45543222 367788889999
Q ss_pred HHHHHHHHHc-cCCCCCCCCCcEEEECCCCCCCCCcEE-EEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHh
Q 006746 474 INWLVNALMK-LQHPNTEGNALVKIYGPKIRFDRGPAL-AFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 474 ~~~L~~~L~~-l~h~~~~G~p~v~Iygp~~~~~rg~iv-aFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~ 550 (632)
.+++.+.|.+ + |.++++.| .++.+ .+.+.+. | ++...+.+ +++++||.++.|..|..
T Consensus 299 ~~~l~~~L~~~~--------~~~~~~~~-----~~~~~~~~~~~~~-~--~~~~~l~~~l~~~~gi~v~~g~~f~~---- 358 (390)
T 1d2f_A 299 LTYIADKMNAAF--------PELNWQIP-----QSTYLAWLDLRPL-N--IDDNALQKALIEQEKVAIMPGYTYGE---- 358 (390)
T ss_dssp HHHHHHHHHHHC--------SSCCCCCC-----SBCSEEEEECGGG-C--CCHHHHHHHHHHTTCEECEEGGGGCG----
T ss_pred HHHHHHHHHhhC--------CCCEEecC-----CccEEEEEEcccc-C--CCHHHHHHHHHHHcCEEeeCccccCC----
Confidence 9999999987 5 44555444 34444 4566532 1 34555554 44478999988754432
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
...+.||+|++. +.+|++.+++.|++.++
T Consensus 359 ------------------------------~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 387 (390)
T 1d2f_A 359 ------------------------------EGRGFVRLNAGC--PRSKLEKGVAGLINAIR 387 (390)
T ss_dssp ------------------------------GGTTEEEEECCS--CHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 023689999997 58999999999988775
No 121
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.85 E-value=5.7e-20 Score=195.10 Aligned_cols=320 Identities=11% Similarity=0.134 Sum_probs=208.2
Q ss_pred CCceEeecCCCC------CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIG------LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~g------l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|+|.++.. ..++.+++++.+.+... .++... |. .....+.|+.|+
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~--------------------~~~~~~--y~---~~~~~~l~~~la 80 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKL--------------------LHVSNL--YE---NPWQEELAHKLV 80 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHC--------------------SCCCTT--BC---CHHHHHHHHHHH
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhc--------------------cccCcc--cC---CHHHHHHHHHHH
Confidence 567899998643 26788888876543211 111111 21 134568899999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC--C---CCC-CeEEE-eccccchhhHHHHHHHH----hcCCE-----EEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP--F---MSV-KNLLT-VYDYESEAVEAMIRTSE----KRGAR-----VMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~--~---~~g-d~ilt-~~d~~s~~v~~~~~~a~----~~G~~-----v~~ 244 (632)
+++|++ + .|+||+|+|+|+.+++..+. . ++| |+|++ ...||.....++ .... ..|.. +..
T Consensus 81 ~~~g~~-~--~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 156 (375)
T 2eh6_A 81 KHFWTE-G--KVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSL-SATGQPKFHKGFEPLVPGFSY 156 (375)
T ss_dssp HTSSSC-E--EEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHH-HHCBCGGGTTTTCSCCSSEEE
T ss_pred hhcCCC-C--eEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhh-hhcCCccccCCCCCCCCCcee
Confidence 999983 3 79999999999999986521 2 567 88765 456675322222 1110 01222 333
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc-CCCCCCC
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL-GPKDMDS 318 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~g~~m~~ 318 (632)
++. .|+++|+++|++ +++++++.+.+|.||...| ++ |.++|+++|+++++|.++. ++..-..
T Consensus 157 ~~~------~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (375)
T 2eh6_A 157 AKL------NDIDSVYKLLDE------ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF 224 (375)
T ss_dssp ECT------TCHHHHHTTCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCC------chHHHHHHHhcC------CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc
Confidence 332 478888887764 3589999999999999988 99 9999999999999999988 4431012
Q ss_pred CCCCCCC--CcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 319 FGLSLVR--PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 319 ldls~~~--~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
+++..++ +|++++| |.+|. |.++|+++++++.++.+.+...++. |
T Consensus 225 ~~~~~~~~~~d~~s~S--K~~~~-g~~~G~~~~~~~~~~~~~~~~~~~~----------~-------------------- 271 (375)
T 2eh6_A 225 YAYQHFNLKPDVIALA--KGLGG-GVPIGAILAREEVAQSFTPGSHGST----------F-------------------- 271 (375)
T ss_dssp SGGGGGTCCCSEEEEC--GGGGT-TSCCEEEEEEHHHHTTCCTTSCCCS----------S--------------------
T ss_pred hhhhhcCCCCCEEEEc--ccccC-CCCeEEEEEcHHHHhhhcCCCCCCC----------C--------------------
Confidence 3444455 8999777 87774 6789999999877666654211100 0
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
+++++ . .... .++|+... .+.++.+.+.++
T Consensus 272 ----~~~~~----------------~-~~~~------------------------~~~l~~~~-----~~~~~~~~~~~~ 301 (375)
T 2eh6_A 272 ----GGNPL----------------A-CRAG------------------------TVVVDEVE-----KLLPHVREVGNY 301 (375)
T ss_dssp ----TTCHH----------------H-HHHH------------------------HHHHHHHH-----HHHHHHHHHHHH
T ss_pred ----CCCHH----------------H-HHHH------------------------HHHHHHHH-----HHHHHHHHHHHH
Confidence 00000 0 0111 14454443 677889999999
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhh
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 556 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~ 556 (632)
|.+.|.++ +...+ ...+.++.+.+.+ +...+.+.+.++||.++.+
T Consensus 302 l~~~L~~~------~~~~~--------~~~g~~~~~~~~~------~~~~~~~~l~~~gi~~~~~--------------- 346 (375)
T 2eh6_A 302 FKEKLKEL------GKGKV--------KGRGLMLGLELER------ECKDYVLKALEKGLLINCT--------------- 346 (375)
T ss_dssp HHHHHHHT------TSSEE--------EEETTEEEEECSS------CCHHHHHHHHHTTEECEEE---------------
T ss_pred HHHHHHHH------hcCCc--------eEEEEEEEEEEcC------cHHHHHHHHHHCCCEEecC---------------
Confidence 99999887 22111 1246777777653 2334444444589887632
Q ss_pred hhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 557 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 557 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+.+.||+|+++.++.+|++++++.|+++|
T Consensus 347 -------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 347 -------------------------AGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp -------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred -------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 13589999999999999999999998764
No 122
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.85 E-value=7.5e-20 Score=195.69 Aligned_cols=296 Identities=15% Similarity=0.093 Sum_probs=196.6
Q ss_pred HHHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|+++++ ++++ .|+||+|+|+|+++++.++ .++||+|++. ..|++ ....++..|++++.+
T Consensus 71 ~~lr~~ia~~~~~~~g~~~~~~--~v~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~v 142 (391)
T 3h14_A 71 PALRQRIARLYGEWYGVDLDPG--RVVITPGSSGGFLLAFTAL-FDSGDRVGIGAPGYPS-----YRQILRALGLVPVDL 142 (391)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCHH-----HHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCHH--HEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCcc-----HHHHHHHcCCEEEEe
Confidence 356777777664 4544 7999999999999999998 6889997654 45543 234567789999999
Q ss_pred eccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCC-CCCC
Q 006746 246 EFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKD-MDSF 319 (632)
Q Consensus 246 ~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~-m~~l 319 (632)
+++.. ...+++++|+++ + ++++++++.+|+||..+| ++ |+++|+++|+++++|.++..... -...
T Consensus 143 ~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 213 (391)
T 3h14_A 143 PTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV 213 (391)
T ss_dssp ECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC
T ss_pred ecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc
Confidence 98732 235788888765 2 488999999999999998 77 78899999999999999874210 0012
Q ss_pred CCCC-CCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhh
Q 006746 320 GLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 398 (632)
Q Consensus 320 dls~-~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~ 398 (632)
.+.. .+.++++.|++|.+|.+..++|+++++++.++.+..... .|
T Consensus 214 ~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~------------~~---------------------- 259 (391)
T 3h14_A 214 TALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQ------------NM---------------------- 259 (391)
T ss_dssp CGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHH------------HT----------------------
T ss_pred ChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHh------------hh----------------------
Confidence 2222 345688999999998423347888877765543321100 00
Q ss_pred hccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHH
Q 006746 399 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLV 478 (632)
Q Consensus 399 e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~ 478 (632)
. ++.+.+...++. ++|+ ....++.+.++.+.+.++|.
T Consensus 260 -~----------------~~~~~~~~~a~~------------------------~~l~--~~~~~~~~~~~~~~~~~~l~ 296 (391)
T 3h14_A 260 -F----------------ICAPHASQVAAL------------------------AALD--CDAELQANLDVYKANRKLML 296 (391)
T ss_dssp -T----------------CCCCHHHHHHHH------------------------HHTT--CHHHHHHHHHHHHHHHHHHH
T ss_pred -c----------------cCCCHHHHHHHH------------------------HHhC--ChHHHHHHHHHHHHHHHHHH
Confidence 0 011111122221 3444 12346778889999999999
Q ss_pred HHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHH-HHHHHhCCcEEccCccCChHHHhHHHHhhh
Q 006746 479 NALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLV-QKLADRENISLSYGSLHHIWFSDKYQKEKD 557 (632)
Q Consensus 479 ~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V-~kla~~~gI~lr~G~~c~~~~~~~~~~~~~ 557 (632)
+.|.++ |. +.++.|. .+..+.+.+.+. + ++...+ +++++++||.++.|..|...
T Consensus 297 ~~l~~~------~~--~~~~~~~----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~~---------- 351 (391)
T 3h14_A 297 ERLPKA------GF--TRIAPPD----GAFYVYADVSDL-T--DDSRAFAAEILEKAGVAVTPGLDFDPE---------- 351 (391)
T ss_dssp HHHHHH------TC--CCBCCCC----BTTEEEEECTTT-C--SCHHHHHHHHHHHHCEECEEGGGTCTT----------
T ss_pred HHHHHc------CC--CcccCCC----eeEEEEEecCcc-C--CCHHHHHHHHHHHCCEEEcCchhhCCC----------
Confidence 999887 22 2222221 233444455431 1 345555 55677779999988666431
Q ss_pred hhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 558 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 558 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||+|++. +.+||+.+++.|+++++.
T Consensus 352 -----------------------~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 352 -----------------------RGAGTLRFSYAR--ATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp -----------------------TGGGEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred -----------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 134699999998 789999999999988653
No 123
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.85 E-value=2.1e-19 Score=192.45 Aligned_cols=298 Identities=10% Similarity=0.056 Sum_probs=200.8
Q ss_pred HHHHHHHHHH----cC--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDF----LN--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~----l~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.++++ +| ++++ .|+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.+
T Consensus 69 ~~l~~~la~~l~~~~g~~~~~~--~v~~t~g~~~a~~~~~~~l-~~~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~~ 140 (399)
T 1c7n_A 69 EEYKKTVKKWMKDRHQWDIQTD--WIINTAGVVPAVFNAVREF-TKPGDGVIIITPVYYP-----FFMAIKNQERKIIEC 140 (399)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTH-----HHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCChh--hEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCcHh-----HHHHHHHcCCEEEec
Confidence 3566666666 47 4443 7999999999999999998 6789997764 35553 234456789999988
Q ss_pred eccCCc--cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCC--CC
Q 006746 246 EFSWPR--LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKD--MD 317 (632)
Q Consensus 246 ~~~~~~--~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~--m~ 317 (632)
+.++++ ..+++++|+++|++. +++++++++.+|+||..+| ++ |+++|+++|+++++|.++..... ..
T Consensus 141 ~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 215 (399)
T 1c7n_A 141 ELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYE 215 (399)
T ss_dssp CCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCC
T ss_pred ccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 875332 358999999999732 3588999999999999999 88 89999999999999999876210 01
Q ss_pred CCCCCC-----CCCcEEEEccccccCCCCCc--eEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 318 SFGLSL-----VRPDFLICSFYQIFGENPSG--FGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 318 ~ldls~-----~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
..++.. .+.++++.|++|.+| +.| +|++++++ +.++.+.... ..|
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~~l~~~~------------~~~------------- 268 (399)
T 1c7n_A 216 HTVFQSIDEQLADKTITFTAPSKTFN--IAGMGMSNIIIKNPDIRERFTKSR------------DAT------------- 268 (399)
T ss_dssp CCCGGGSCHHHHTTEEEEECSHHHHT--CGGGCCEEEECCCHHHHHHHHHHH------------HHT-------------
T ss_pred cccHHHcCccccCcEEEEEeChhhcc--ccchheEEEEECCHHHHHHHHHHH------------hhc-------------
Confidence 223322 345799999999998 446 69999874 3544332210 000
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 469 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r 469 (632)
+ .++.+.+...++. ++|+... ..++.+.++
T Consensus 269 -----------~--------------~~~~~~~~~~a~~------------------------~~l~~~~-~~~~~~~~~ 298 (399)
T 1c7n_A 269 -----------S--------------GMPFTTLGYKACE------------------------ICYKECG-KWLDGCIKV 298 (399)
T ss_dssp -----------T--------------CCCCCHHHHHHHH------------------------HHHHHCH-HHHHHHHHH
T ss_pred -----------c--------------cCCCCHHHHHHHH------------------------HHHhCCh-HHHHHHHHH
Confidence 0 0011111122221 4444321 246788888
Q ss_pred HHHHHHHHHHHHHc-cCCCCCCCCCcEEEECCCCCCCCCcEE-EEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCCh
Q 006746 470 GRCLINWLVNALMK-LQHPNTEGNALVKIYGPKIRFDRGPAL-AFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHI 546 (632)
Q Consensus 470 ~~~L~~~L~~~L~~-l~h~~~~G~p~v~Iygp~~~~~rg~iv-aFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~ 546 (632)
.+.+.++|.+.|.+ + |.++++.| .++.+ .+.+.+. | ++...+.+ |++++||.++.|..|..
T Consensus 299 ~~~~~~~l~~~L~~~~--------~~~~~~~~-----~~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~ 362 (399)
T 1c7n_A 299 IDKNQRIVKDFFEVNH--------PEIKAPLI-----EGTYLQWIDFRAL-K--MDHKAMEEFMIHKAQIFFDEGYIFGD 362 (399)
T ss_dssp HHHHHHHHHHHHHHHC--------TTSBCCCC-----SBSSEEEEECGGG-C--CCHHHHHHHHHHTTCCCCEEGGGGCG
T ss_pred HHHHHHHHHHHHHhhC--------CCCeEecC-----CceEEEEEEcccC-C--CCHHHHHHHHHHhCCEEEeCccccCC
Confidence 99999999999987 5 44555443 34544 4566531 1 35555554 54678999987754432
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.||+|++.. .++++.+++.|+++++.
T Consensus 363 ----------------------------------~~~~~iRis~~~~--~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 363 ----------------------------------GGIGFERINLAAP--SSVIQESLERLNKALKD 392 (399)
T ss_dssp ----------------------------------GGTTEEEEECCSC--HHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCCeEEEEeccC--HHHHHHHHHHHHHHHHH
Confidence 0236899999875 79999999999988764
No 124
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.85 E-value=9.4e-20 Score=197.57 Aligned_cols=305 Identities=11% Similarity=0.129 Sum_probs=208.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.++.+++++.+++.++.+.+...|+||+|+++|+++++.++ .++||+|++ ...|++ ....++..|.+++.+|+
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~-~~~gd~Vi~~~~~y~~-----~~~~~~~~g~~~~~~~~ 172 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAF-SEKGDAVLINSPVYYP-----FARTIRLNDHRLVENSL 172 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH-SCTEEEEEEEESCCHH-----HHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHh-cCCCCEEEECCCCcHH-----HHHHHHHCCCEEEeccc
Confidence 46778888899998884333338999999999999999998 688999765 445653 23345678999999998
Q ss_pred cC--CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc---chH-HHHHHhhCCcEEEEeccccC----CCC--
Q 006746 248 SW--PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY---PYL-WMRIAQENDWHILIDACALG----PKD-- 315 (632)
Q Consensus 248 ~~--~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~---pl~-i~~~a~~~g~~vlvDaaq~~----g~~-- 315 (632)
++ +...+|+++|+++|++. ++++|++++.+|+||..+ +++ |.++|+++|+++++|.+|.. |..
T Consensus 173 ~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~ 247 (421)
T 3l8a_A 173 QIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHH 247 (421)
T ss_dssp EEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCC
T ss_pred cccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCc
Confidence 62 33468999999999832 358999999999999884 677 88899999999999999875 211
Q ss_pred -CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 316 -MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 316 -m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
+..++.+..+.++++.|++|.+|.+...+|+++++ +++.+.+.+...
T Consensus 248 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~------------------------------- 296 (421)
T 3l8a_A 248 SLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQL------------------------------- 296 (421)
T ss_dssp CGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH-------------------------------
T ss_pred cHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHH-------------------------------
Confidence 11222222355699999999988321234888887 444333321000
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
..+ .+++|.+.+.++. ++|+...+ .++.+.++.+.+
T Consensus 297 -----~~~--------------~~~~n~~~~~a~~------------------------aal~~~~~-~~~~~~~~~~~~ 332 (421)
T 3l8a_A 297 -----ANN--------------QHEVPTVGMIATQ------------------------AAFQYGKP-WLEELKTVIEGN 332 (421)
T ss_dssp -----HTT--------------CSCCCHHHHHHHH------------------------HHHHHCHH-HHHHHHHHHHHH
T ss_pred -----hcc--------------cCCCCHHHHHHHH------------------------HHHhccHH-HHHHHHHHHHHH
Confidence 000 1122333333333 55553222 368888999999
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEE-EEEccCCCCccCH-HHHHHHHHhCCcEEccCccCChHHHhH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALA-FNVFDWKREKIEP-VLVQKLADRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~iva-Fnv~~~~G~~i~~-~~V~kla~~~gI~lr~G~~c~~~~~~~ 551 (632)
.++|.+.|.++ |.++++.|. ++.+. +.+... | ++. +.++++++++||.++.|..|..
T Consensus 333 ~~~l~~~L~~~--------~~i~~~~~~-----~~~~~~v~~~~~-~--~~~~~l~~~l~~~~gi~v~~g~~f~~----- 391 (421)
T 3l8a_A 333 IKLVIKELEAK--------TKIKVMEPE-----GTYLVWLDFSAY-A--IAQPQLSEKLQNEAKVVLNDGAHFGK----- 391 (421)
T ss_dssp HHHHHHHHHHH--------CSCEEECCS-----BSSEEEEECGGG-T--CCTTHHHHHHHHTTCEECEEGGGGCG-----
T ss_pred HHHHHHHHHhC--------CCceEeCCC-----eeEEEEEecccc-C--CCHHHHHHHHHHhCCEEEECchhhCC-----
Confidence 99999999887 557777653 44444 555431 1 233 4455566788999988754432
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+.++||+|++ ++.+||+.+++.|++.++
T Consensus 392 -----------------------------~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 392 -----------------------------EGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp -----------------------------GGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred -----------------------------CCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 13469999998 699999999999998764
No 125
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.85 E-value=1.4e-19 Score=193.85 Aligned_cols=296 Identities=10% Similarity=0.068 Sum_probs=194.7
Q ss_pred HHHHHHHHH----cCCCCCCccEEEeCCHHHHHHHHHhhCCCCCC-CeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 174 AMKKRIMDF----LNISENDYGMVFTANRTSAFKLLAESYPFMSV-KNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 174 ~~R~~ia~~----l~a~~~ey~vvft~naT~al~lv~~sl~~~~g-d~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
+.|+.++++ +|.+.+...|+||+|+|+|+.+++.++ +++| |+|++. ..|++ ....++..|++++.++.
T Consensus 80 ~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l-~~~g~d~vl~~~p~~~~-----~~~~~~~~g~~~~~v~~ 153 (398)
T 3ele_A 80 ETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRAL-TSDAYDEFITIAPYFPE-----YKVFVNAAGARLVEVPA 153 (398)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH-CCSTTCEEEEESSCCTH-----HHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHH-cCCCCCEEEEeCCCchh-----hHHHHHHcCCEEEEEec
Confidence 445555555 453222337999999999999999998 7899 997754 45553 23456778999999999
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhh------CCcEEEEeccccC----C
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQE------NDWHILIDACALG----P 313 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~------~g~~vlvDaaq~~----g 313 (632)
++.+..+++++|+++++++ ++++++++.+|+||..+| ++ |+++|++ +|+++++|.++.. +
T Consensus 154 ~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~ 227 (398)
T 3ele_A 154 DTEHFQIDFDALEERINAH------TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDG 227 (398)
T ss_dssp CTTTSSCCHHHHHHTCCTT------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTT
T ss_pred CCcCCcCCHHHHHHHhCcC------CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCC
Confidence 7555678999999988653 589999999999999999 45 6688888 8999999998765 2
Q ss_pred CCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 314 KDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 314 ~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
.. .+...+..+.++++.|++|.+|.+..++|+++++++.++... ... . + .
T Consensus 228 ~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~--~~~-------~----~----------------~ 277 (398)
T 3ele_A 228 IK-VPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAE--LYA-------A----V----------------C 277 (398)
T ss_dssp CC-CCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHH--HHH-------H----H----------------H
T ss_pred CC-cCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHH--HHH-------H----H----------------H
Confidence 11 233334566789999999999843345899999887643110 000 0 0 0
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.. ... .++.+.+.+... .+...++... ..++.+..
T Consensus 278 ~~---~~~--------------~~~~~~~~~~~~-------------------------a~~~~l~~~~---~~~~~~~~ 312 (398)
T 3ele_A 278 GA---GRA--------------LGYVCAPSLFQK-------------------------MIVKCQGATG---DINAYKEN 312 (398)
T ss_dssp HH---HHH--------------TTCCCSCHHHHH-------------------------HHTTCTTCCC---CHHHHHHH
T ss_pred HH---hhh--------------ccccCCCHHHHH-------------------------HHHHHhcCHH---HHHHHHHH
Confidence 00 000 000001101100 1111111111 24566777
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
.+++.+.|.++ | ++++.|. .+-.+.+.+.+ .+...+.+.+.++||.++.|..|.
T Consensus 313 ~~~l~~~L~~~------g---~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~-------- 366 (398)
T 3ele_A 313 RDLLYEGLTRI------G---YHCFKPD----GAFYMFVKALE-----DDSNAFCEKAKEEDVLIVAADGFG-------- 366 (398)
T ss_dssp HHHHHHHHHHH------T---CCEECCS----BSSEEEEECSS-----SCHHHHHHHHHTTTEECEESGGGT--------
T ss_pred HHHHHHHHHHc------C---CeecCCC----eeEEEEEEcCC-----CCHHHHHHHHHHCCEEEeCccccC--------
Confidence 78888888877 4 3445442 23336666554 356677777788999998774332
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||+|++ ++.|||+++++.|+++++.
T Consensus 367 ----------------------------~~~~iRis~~--~~~e~i~~~l~~l~~~l~~ 395 (398)
T 3ele_A 367 ----------------------------CPGWVRISYC--VDREMIKHSMPAFEKIYKK 395 (398)
T ss_dssp ----------------------------CTTEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 1359999997 7999999999999998764
No 126
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.85 E-value=9.4e-21 Score=209.25 Aligned_cols=165 Identities=10% Similarity=0.104 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
...+++++.+++++|++ ++++++|+++|+.+++. + +++||+|++. ..|++ ....+...++..|++++.++.+
T Consensus 133 ~~~~~l~~~la~~~g~~----~~i~~~sGt~al~~~l~-~-~~~Gd~Vi~~~~~y~~-~~~~~~~~~~~~G~~v~~v~~~ 205 (464)
T 1ibj_A 133 PTRDALESLLAKLDKAD----RAFCFTSGMAALSAVTH-L-IKNGEEIVAGDDVYGG-SDRLLSQVVPRSGVVVKRVNTT 205 (464)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHT-T-SCTTCEEEEESSCCHH-HHHHHHHTSGGGTCEEEEECTT
T ss_pred HHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHH-H-hCCCCEEEEECCCchh-HHHHHHHHHHHcCCEEEEeCCC
Confidence 46789999999999974 47777888999998886 4 6899997755 45654 3333334457789999998763
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
+.++|+++|+++ ++++.+++.+|+||..+|++ |+++|+++|+++++|.+++.|....+++ +++|
T Consensus 206 ------d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~---~~~d 270 (464)
T 1ibj_A 206 ------KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE---LGAD 270 (464)
T ss_dssp ------SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG---TTCS
T ss_pred ------CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh---cCCE
Confidence 788999888653 59999999999999999999 9999999999999999998775212443 5789
Q ss_pred EEEEccccccCCCCCce--EEEEEeC-CCcccc
Q 006746 328 FLICSFYQIFGENPSGF--GCLFVKK-STVPIL 357 (632)
Q Consensus 328 f~~~S~hK~~G~~P~G~--G~L~Vr~-~~~~~L 357 (632)
+++.|++|++|. |.|+ |++++++ +.++.+
T Consensus 271 iv~~S~sK~~~g-~~Gl~~G~l~~~~~~l~~~l 302 (464)
T 1ibj_A 271 IVMHSATKFIAG-HSDVMAGVLAVKGEKLAKEV 302 (464)
T ss_dssp EEEEETTTTTTC-SSCCCCEEEEECSHHHHHHH
T ss_pred EEEECCcccccC-CCCCcEEEEEEChHHHHHHH
Confidence 999999997764 7787 9999986 444433
No 127
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.84 E-value=8.1e-20 Score=196.29 Aligned_cols=303 Identities=13% Similarity=0.098 Sum_probs=203.5
Q ss_pred HHHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 173 SAMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.|+.+++++ |.+.+...|+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.++.
T Consensus 78 ~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~-~~~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 78 PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVL-IDPGDVVITENPSYIN-----TLLAFEQLGAKIEGVPV 151 (407)
T ss_dssp HHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH-----HHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHh-cCCCCEEEEeCCChHH-----HHHHHHHcCCEEEEccc
Confidence 46788888887 84333337999999999999999998 6789997654 45553 23445778999999998
Q ss_pred cCCccccCHHHHHHHHH----hcCcCCCceeEE-EEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCC--C
Q 006746 248 SWPRLRINSEKLRKMVV----SKGKKKKQRGLF-VFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKD--M 316 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~----~~~~~~~~~~Lv-~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~--m 316 (632)
+ +++ +++++|+++++ +. .+++++ ++++.+|+||..+|++ |+++|+++|+++++|.++....- .
T Consensus 152 ~-~~~-~d~~~l~~~l~~~~~~~----~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 225 (407)
T 2zc0_A 152 D-NDG-MRVDLLEEKIKELKAKG----QKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGG 225 (407)
T ss_dssp E-TTE-ECHHHHHHHHHHHHHTT----CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCS
T ss_pred C-CCC-CCHHHHHHHHHhhhccc----CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCC
Confidence 7 344 89999999997 41 135776 6889999999999983 67889999999999999876320 0
Q ss_pred CCCCCC---CCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 317 DSFGLS---LVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 317 ~~ldls---~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
....+. ..+.++++.|++|++| | ..+|+++++++.++.+...... |.
T Consensus 226 ~~~~~~~~~~~~~~i~~~s~sK~~~--~G~r~G~~~~~~~~~~~~~~~~~~------------~~--------------- 276 (407)
T 2zc0_A 226 DIVPLKALDNEGRVIVAGTLSKVLG--TGFRIGWIIAEGEILKKVLMQKQP------------ID--------------- 276 (407)
T ss_dssp SCCCGGGGCSSCCEEEEEESTTTTC--TTSCCEEEECCHHHHHHHHHHHTT------------TT---------------
T ss_pred CCCChhhcCCCCCEEEEcccccccC--CCcceEEEecCHHHHHHHHHHHHh------------hc---------------
Confidence 111222 2245689999999999 4 2489999887665444321000 00
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHH-Hh-hCHHHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQV-DS-LGLTMISRRG 470 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~-~~-~Gl~~I~~r~ 470 (632)
.++ +.+...++. .+|+.. .. ..++.+.++.
T Consensus 277 -------~~~-----------------~~~~~~~~~------------------------~~l~~~~~~~~~~~~~~~~~ 308 (407)
T 2zc0_A 277 -------FCA-----------------PAISQYIAL------------------------EYLKRGYFEKYHLEGALLGY 308 (407)
T ss_dssp -------SSS-----------------CHHHHHHHH------------------------HHHHTTHHHHHTTTTHHHHH
T ss_pred -------CCC-----------------CHHHHHHHH------------------------HHHHcCCchHHHHHHHHHHH
Confidence 000 000011111 333321 11 3567788888
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHH-HHHHhCCcEEccCccCChHHH
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQ-KLADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~-kla~~~gI~lr~G~~c~~~~~ 549 (632)
+.+.++|.+.|.++ .|.++++.|. .+..+.+.+.+ | ++...+. +|++++||.++.|..|...
T Consensus 309 ~~~~~~l~~~L~~~-------~~~~~~~~~~----~~~~~~~~~~~--~--~~~~~l~~~l~~~~gi~v~~g~~~~~~-- 371 (407)
T 2zc0_A 309 KEKRDIMLKALENH-------LPNAEFTKPI----AGMFVMFFLPE--G--ADGISFANELMEREGVVVVPGKPFYTD-- 371 (407)
T ss_dssp HHHHHHHHHHHHHH-------CTTSCBCCCS----BSSEEEEECST--T--CCHHHHHHHHHHHTCEECBCSGGGCSS--
T ss_pred HHHHHHHHHHHHHh-------CCCCEEecCC----CcEEEEEEcCC--C--CCHHHHHHHHHHhCCeEEECchhccCC--
Confidence 99999999999874 1444554442 35567777653 1 4555555 4555559999987544321
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+.||+|++.. |.+||+++++.|++.++.
T Consensus 372 ------------------------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 372 ------------------------------ESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp ------------------------------SCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHH
Confidence 11246999999988 899999999999998764
No 128
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.84 E-value=8.1e-20 Score=196.48 Aligned_cols=346 Identities=12% Similarity=0.065 Sum_probs=216.2
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccc-hhHHHHHHHHHHHHHcCCCCCCccEE
Q 006746 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ-ESGLESAMKKRIMDFLNISENDYGMV 193 (632)
Q Consensus 115 ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~-~~~~~~~~R~~ia~~l~a~~~ey~vv 193 (632)
++..++++.+++++.+.+... |..+++.+.+..+.. ...+.+.+|+.+++++|++++ .|+
T Consensus 32 ~~~~~~~~~v~~a~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~i~ 92 (417)
T 3n0l_A 32 ASENFTLPEVMEVMGSILTNK-----------------YAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFA--NVQ 92 (417)
T ss_dssp TTCCCCCHHHHHHHTBGGGGC-----------------CCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE--ECC
T ss_pred cccCCCCHHHHHHHhhhhhcc-----------------ccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCc--ceE
Confidence 455667999999987654211 011333322211221 235556788999999999754 466
Q ss_pred EeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCc
Q 006746 194 FTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQ 272 (632)
Q Consensus 194 ft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~ 272 (632)
+|++ |+|+.+++.++ +++||+|++. ..|++....+..-.....++.+..++++ .++.+|+++|+++|++. +
T Consensus 93 ~~sG-t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~ 164 (417)
T 3n0l_A 93 PNSG-SQANQGVYAAL-INPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE-LDGRIDYEKVREIAKKE-----K 164 (417)
T ss_dssp CSSH-HHHHHHHHHHH-SCTTCEEEEECC----------------CCSEEEEECCC-TTSSCCHHHHHHHHHHH-----C
T ss_pred eccH-HHHHHHHHHHh-cCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC-CCCCcCHHHHHHHHHhc-----C
Confidence 6655 89999999999 8999997654 4665421212111112245666777777 67779999999999842 2
Q ss_pred eeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC---CCCCCCCCCCCcEEEEccccccCCCCCceEEEE
Q 006746 273 RGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD---MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLF 348 (632)
Q Consensus 273 ~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~---m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~ 348 (632)
++++++.+.+ +|...|++ |.++|+++|+++++|.+|+.|.. ..+..+. .+|++++|+||.++. |.| |+++
T Consensus 165 ~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~l~g-~~~-G~~~ 238 (417)
T 3n0l_A 165 PKLIVCGASA--YARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP--YAHVVSSTTHKTLRG-PRG-GIIM 238 (417)
T ss_dssp CSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT--TCSEEEEESSTTTCS-CSC-EEEE
T ss_pred CeEEEECCcc--cCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc--cceEEEeeCccccCC-CCe-eEEE
Confidence 4778766655 49999999 99999999999999999865320 0122222 579999999996654 765 8888
Q ss_pred EeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHh
Q 006746 349 VKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEV 427 (632)
Q Consensus 349 Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l 427 (632)
.++ +..+.+...... ++ .|+++...+.++
T Consensus 239 ~~~~~~~~~~~~~~~~-------------------------------------~~-------------~~~~~~~~~aa~ 268 (417)
T 3n0l_A 239 TNDEELAKKINSAIFP-------------------------------------GI-------------QGGPLMHVIAAK 268 (417)
T ss_dssp ESCHHHHHHHHHHHTT-------------------------------------TT-------------CSSCCHHHHHHH
T ss_pred ECCHHHHHHHhhhhCC-------------------------------------cc-------------cCCcHHHHHHHH
Confidence 873 444333221100 00 112222333333
Q ss_pred hhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCC
Q 006746 428 RRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRG 507 (632)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg 507 (632)
. .+++.....+++.+.++.+.+.++|.+.|.++ | ++++.+. ..+
T Consensus 269 ~------------------------~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~---~~~ 312 (417)
T 3n0l_A 269 A------------------------VGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR------K---FKLVSDG---TDN 312 (417)
T ss_dssp H------------------------HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT------T---CEEGGGS---CSS
T ss_pred H------------------------HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC------C---ceeccCC---CCc
Confidence 3 45554433457788889999999999999885 3 3444321 234
Q ss_pred cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEE
Q 006746 508 PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVT 587 (632)
Q Consensus 508 ~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VR 587 (632)
.++.+.+.+ ..++...+.+++.++||.++.+.. +.. . ........+|
T Consensus 313 ~~~~~~~~~---~~~~~~~~~~~l~~~gi~v~~~~~--~~~-----------------------~-----~~~~~~~~~r 359 (417)
T 3n0l_A 313 HLVLMSFLD---REFSGKDADLALGNAGITANKNTV--PGE-----------------------I-----RSPFITSGLR 359 (417)
T ss_dssp SEEEEECTT---SSSCHHHHHHHHHHTTEECEECCC--TTC-----------------------C-----SCTTTCSEEE
T ss_pred eEEEEEccc---CCCCHHHHHHHHHHcCeEEecccc--CCC-----------------------C-----cccCCCCeeE
Confidence 455555543 125778888888899999985421 100 0 0112335799
Q ss_pred EccCCCC----CHHHHHHHHHHHHHhhhh
Q 006746 588 ASLGYLA----NFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 588 vSlg~~~----t~eDV~rlv~~l~~~l~~ 612 (632)
+++..++ +.+||+++++.|++.|+.
T Consensus 360 i~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 360 LGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp EECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred ecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 9987654 589999999999998865
No 129
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.84 E-value=9.3e-20 Score=196.69 Aligned_cols=297 Identities=12% Similarity=0.068 Sum_probs=195.6
Q ss_pred HHHHHHHHHHcC----CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 173 SAMKKRIMDFLN----ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 173 ~~~R~~ia~~l~----a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.|+.++++++ .+.+...|++|+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.++.
T Consensus 82 ~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~ 155 (409)
T 2gb3_A 82 WELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVI-ANPGDEILVLEPFYAN-Y----NAFAKIAGVKLIPVTR 155 (409)
T ss_dssp HHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH-H----HHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEecc
Confidence 356777777764 2222237999999999999999998 788999765 456664 2 2345668999999998
Q ss_pred cC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCCC-CCCC-
Q 006746 248 SW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKDM-DSFG- 320 (632)
Q Consensus 248 ~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~m-~~ld- 320 (632)
+. .+..+ +++|++++++ +++++++++.+|+||..+| ++ |+++|+++|+++++|.++..+..- ..+.
T Consensus 156 ~~~~~~~~-~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~ 228 (409)
T 2gb3_A 156 RMEEGFAI-PQNLESFINE------RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA 228 (409)
T ss_dssp CGGGTSCC-CTTGGGGCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG
T ss_pred CCCCCCcc-HHHHHHhhCc------CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc
Confidence 73 12233 6777776654 3588999999999999986 66 889999999999999998764210 0122
Q ss_pred CCC-CCCcEEEEccccccCCCCCc--eEEEEEeC-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 321 LSL-VRPDFLICSFYQIFGENPSG--FGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 321 ls~-~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
+.. .+.|+++.|++|++| +.| +|++++++ +.++.+.....
T Consensus 229 ~~~~~~~~i~~~s~sK~~g--~~G~r~G~~~~~~~~l~~~l~~~~~---------------------------------- 272 (409)
T 2gb3_A 229 LSIESDKVVVIDSVSKKFS--ACGARVGCLITRNEELISHAMKLAQ---------------------------------- 272 (409)
T ss_dssp GGSCCTTEEEEEESTTTTT--CGGGCCEEEECSCHHHHHHHHHHHH----------------------------------
T ss_pred cccCCCCEEEEecchhccC--CccceEEEEEECcHHHHHHHHHHHh----------------------------------
Confidence 232 367999999999999 557 89999988 66544422100
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
..+ +.+.+...++. ++|+.. ..+++.+.++.+.+.++
T Consensus 273 ---~~~---------------~~~~~~~~a~~------------------------~~l~~~-~~~~~~~~~~~~~~~~~ 309 (409)
T 2gb3_A 273 ---GRL---------------APPLLEQIGSV------------------------GLLNLD-DSFFDFVRETYRERVET 309 (409)
T ss_dssp ---HSC---------------CCCHHHHHHHH------------------------HHHTCC-HHHHHHHHHHHHHHHHH
T ss_pred ---ccC---------------CCCHHHHHHHH------------------------HHHhcc-HHHHHHHHHHHHHHHHH
Confidence 000 00111111111 344221 12467788889999999
Q ss_pred HHHHHHccCCCCCCCCCcEEE-ECCCCCCCCCcEEEEEEccCCCCccCHHHHH-HHHHh-----CCcEEccCccCChHHH
Q 006746 477 LVNALMKLQHPNTEGNALVKI-YGPKIRFDRGPALAFNVFDWKREKIEPVLVQ-KLADR-----ENISLSYGSLHHIWFS 549 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~I-ygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~-kla~~-----~gI~lr~G~~c~~~~~ 549 (632)
+.+.|.++ |. ++ +.|. .+..+.+.+.+ .+...+. +|+++ +||.++.|..|...
T Consensus 310 l~~~L~~~------g~---~~~~~~~----~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~-- 369 (409)
T 2gb3_A 310 VLKKLEEH------GL---KRFTKPS----GAFYITAELPV-----EDAEEFARWMLTDFNMDGETTMVAPLRGFYLT-- 369 (409)
T ss_dssp HHHHHHHT------TC---CCBCCCS----BSSEEEEECSS-----SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSS--
T ss_pred HHHHHHHc------Cc---eeeeCCC----eeEEEEEEeCC-----CCHHHHHHHHHhccccccCcEEEeCchHhCCC--
Confidence 99999886 32 23 2331 23334335542 3555555 45555 49999876433210
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.+.||+|++ ++.+||+++++.|+++++.
T Consensus 370 -----------------------------~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 370 -----------------------------PGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp -----------------------------TTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 0113469999999 8999999999999998764
No 130
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.84 E-value=6.3e-20 Score=198.00 Aligned_cols=297 Identities=13% Similarity=0.062 Sum_probs=199.1
Q ss_pred HHHHHHHHHHc----CCCCCC-ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 173 SAMKKRIMDFL----NISEND-YGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~e-y~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.+.|+.|++++ |.+.+. ..|+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.++
T Consensus 78 ~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~-----~~~~~~~~g~~~~~~~ 151 (412)
T 2x5d_A 78 PRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPI-----HIYGAVIAGAQVRSVP 151 (412)
T ss_dssp HHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHH-----HHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh-----HHHHHHHcCCEEEEee
Confidence 46788888887 863221 37999999999999999998 6889997654 46653 2334566899999999
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccCCCC--CCCC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALGPKD--MDSF 319 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~g~~--m~~l 319 (632)
.+.. ...+|+++|+++++++ ++++++++.+|+||..+|. + |+++|+++|+++++|.++....- -...
T Consensus 152 ~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 225 (412)
T 2x5d_A 152 LVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAP 225 (412)
T ss_dssp CSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCC
T ss_pred cCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCC
Confidence 8743 2236788888877643 4788899999999999984 5 78899999999999999876320 0112
Q ss_pred CCCC----CCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 320 GLSL----VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 320 dls~----~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
++.. .+.|+++.|++|+|| +.| +|+++++++.++.+.....
T Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~------------------------------- 272 (412)
T 2x5d_A 226 SIMQVPGAKDIAVEFFTLSKSYN--MAGWRIGFMVGNPELVSALARIKS------------------------------- 272 (412)
T ss_dssp CGGGSTTGGGTEEEEEECC-CCS--CTTSCCEEEEECHHHHHHHHHHHH-------------------------------
T ss_pred ChhhccCccCcEEEEecCccccC--CcccceEEEEcCHHHHHHHHHHHh-------------------------------
Confidence 2221 467999999999998 446 6999998766544432100
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
. .. .+.+.+...++. ++|+... ..++.+.++.+.+
T Consensus 273 -~---~~----------------~~~~~~~~~a~~------------------------~~l~~~~-~~~~~~~~~~~~~ 307 (412)
T 2x5d_A 273 -Y---HD----------------YGTFTPLQVAAI------------------------AALEGDQ-QCVRDIARQYQQR 307 (412)
T ss_dssp -H---HC----------------CCCCHHHHHHHH------------------------HHHHSCS-HHHHHHHHHHHHH
T ss_pred -h---hc----------------cCCCHHHHHHHH------------------------HHHhCCH-HHHHHHHHHHHHH
Confidence 0 00 001111112111 3333211 1367788889999
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCcc---CHHHH-HHHHHhCCcEEccCccCChHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKI---EPVLV-QKLADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i---~~~~V-~kla~~~gI~lr~G~~c~~~~~ 549 (632)
.+++.+.|.++ |. +++.| ..+..+.+.+.+ + + +...+ ++|++++||.++.|..|..
T Consensus 308 ~~~l~~~L~~~------g~---~~~~~----~~g~~~~~~~~~--~--~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--- 367 (412)
T 2x5d_A 308 RDVLVKGLREA------GW---MVENP----KASMYVWAKIPE--P--YAHLGSLEFAKKLLQDAKVSVSPGIGFGD--- 367 (412)
T ss_dssp HHHHHHHHHHH------TC---CCCCC----SBSSEEEEECCT--T--TGGGCHHHHHHHHHHHHCEECEEGGGGCG---
T ss_pred HHHHHHHHHHC------CC---EecCC----CeeeEEEEEcCC--c--cCCCCHHHHHHHHHHHCCEEEeCchhhCC---
Confidence 99999999887 32 23332 123356666642 1 2 34444 4566778999987754421
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||+|++. +.+|++.+++.|+++++.
T Consensus 368 -------------------------------~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 368 -------------------------------YGDDHVRFALIE--NRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp -------------------------------GGTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 123689999997 899999999999998876
No 131
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.84 E-value=2.9e-19 Score=193.92 Aligned_cols=327 Identities=13% Similarity=0.080 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+.+.|++|+++++++ .|+||+|+|+|+.+++.++. +||+|++ ...|++ .. ..++..|++++.++++
T Consensus 52 ~~~~~l~~~la~~~~~~----~v~~~~ggt~al~~~l~~l~--~gd~Vlv~~~~~~~-~~----~~~~~~G~~~~~v~~~ 120 (424)
T 2po3_A 52 PLVREFEERVAGLAGVR----HAVATCNATAGLQLLAHAAG--LTGEVIMPSMTFAA-TP----HALRWIGLTPVFADID 120 (424)
T ss_dssp HHHHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHHT--CCSEEEEESSSCTH-HH----HHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcC--CCCEEEECCCccHH-HH----HHHHHcCCEEEEEecC
Confidence 45678999999999984 69999999999999999984 6888765 457764 22 2456689999999997
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPD 327 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~D 327 (632)
..++.+|+++|+++|+++ ++++++.+ +||...|++ |.++|+++|+++++|+++..|.....-.+..+ +|
T Consensus 121 ~~~~~~d~~~l~~~i~~~------~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~-~d 190 (424)
T 2po3_A 121 PDTGNLDPDQVAAAVTPR------TSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSL-GD 190 (424)
T ss_dssp TTTSSBCHHHHGGGCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SS
T ss_pred CCcCCcCHHHHHHhhCcC------CcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccc-cC
Confidence 446778999998887643 57887754 799999999 99999999999999999986541110111112 58
Q ss_pred EEEEccc--cccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccC
Q 006746 328 FLICSFY--QIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 404 (632)
Q Consensus 328 f~~~S~h--K~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~ 404 (632)
++++|++ |.++ |...|+++.+ ++.++.+.+....|... .|. .. ..|...
T Consensus 191 i~~~S~sk~K~l~--~~~~G~~v~~~~~l~~~l~~~~~~~~~~-------~~~--------~~-----------~~g~~~ 242 (424)
T 2po3_A 191 AEVFSFHATKAVN--AFEGGAVVTDDADLAARIRALHNFGFDL-------PGG--------SP-----------AGGTNA 242 (424)
T ss_dssp EEEEECCTTSSSC--CSSCEEEEESCHHHHHHHHHHHBTTTTC-------TTC--------CT-----------TCCCBC
T ss_pred EEEEeCCCCCCcc--CCCCeEEEeCCHHHHHHHHHHHhcCccc-------ccc--------cc-----------ccCcCC
Confidence 9999998 6776 6456777777 45555444321111000 000 00 001000
Q ss_pred CCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcc
Q 006746 405 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 484 (632)
Q Consensus 405 f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l 484 (632)
.+..+.+. .++..+ .+++.+.+|.+.+.++|.+.|.++
T Consensus 243 ---------------~~~~~~aa-------------------------~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~ 280 (424)
T 2po3_A 243 ---------------KMSEAAAA-------------------------MGLTSL--DAFPEVIDRNRRNHAAYREHLADL 280 (424)
T ss_dssp ---------------CCCHHHHH-------------------------HHHHHH--HHHHHHHHHHHHHHHHHHHHTCSC
T ss_pred ---------------CcCHHHHH-------------------------HHHHHH--HHHHHHHHHHHHHHHHHHHHhccC
Confidence 00111111 233222 246778899999999999999876
Q ss_pred CCCCCCCCCcEEEECCCCCCCC-CcEEEEEEccCC-CCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhh
Q 006746 485 QHPNTEGNALVKIYGPKIRFDR-GPALAFNVFDWK-REKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 562 (632)
Q Consensus 485 ~h~~~~G~p~v~Iygp~~~~~r-g~ivaFnv~~~~-G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~ 562 (632)
|.++++.+...... ..++.+.+.+.. | ++...+.+.+.++||.++.. |.+.... . ..+..
T Consensus 281 --------~g~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~l~~~L~~~gI~v~~~--~~~~~~~-~-----~~~~~ 342 (424)
T 2po3_A 281 --------PGVLVADHDRHGLNNHQYVIVEIDEATTG--IHRDLVMEVLKAEGVHTRAY--FSPGCHE-L-----EPYRG 342 (424)
T ss_dssp --------TTEEECCGGGGSCCCCCCEEEEECHHHHS--SCHHHHHHHHHHTTEECBCT--TCSCGGG-S-----TTTTT
T ss_pred --------CCccccCCCCCCccccEEEEEEECCccch--hhHHHHHHHHHHCCCceecc--cCCcccc-c-----hhhhh
Confidence 56888763211112 357777775200 1 46777877888899999863 3211100 0 00000
Q ss_pred hhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 563 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
. +.....+. .......||++++.++|.+||+++++.|+++++.
T Consensus 343 ~---g~~~~~~~----~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~ 385 (424)
T 2po3_A 343 Q---PHAPLPHT----ERLAARVLSLPTGTAIGDDDIRRVADLLRLCATR 385 (424)
T ss_dssp S---CCCCCHHH----HHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred c---CCCCChhH----HHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0 00000000 0001235999999999999999999999998765
No 132
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.84 E-value=5.6e-20 Score=195.54 Aligned_cols=317 Identities=10% Similarity=0.043 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
..+.+.|+++++++|++ .++||+|+|+|+.+++.++.+++||+|++ ...|++ + ...++..|++++.++++
T Consensus 35 ~~~~~l~~~la~~~~~~----~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~--~---~~~~~~~G~~~~~~~~~ 105 (367)
T 3nyt_A 35 PEVTELEDRLADFVGAK----YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVA--T---AETVALLGAKPVYVDID 105 (367)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH--H---HHHHHHTTCEEEEECBC
T ss_pred hHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHH--H---HHHHHHcCCEEEEEecC
Confidence 45678999999999986 58999999999999999998889999765 456664 2 23356789999999998
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCCCC-
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRP- 326 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~~~- 326 (632)
..++.+|+++|+++|+++ +++|+ .+|+||...|++ |.++|+++|+++++|++|+.|.. .+....+.
T Consensus 106 ~~~~~~d~~~l~~~i~~~------~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~---~~~~~~~~~ 173 (367)
T 3nyt_A 106 PRTYNLDPQLLEAAITPR------TKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGAS---YKGKRSCNL 173 (367)
T ss_dssp TTTCSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCE---ETTEETTSS
T ss_pred CccCCcCHHHHHHhcCcC------CcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCe---ECCeeccCC
Confidence 555789999999888653 46666 567999999999 99999999999999999987652 22222222
Q ss_pred -cEEEEcc--ccccCCCCCceEEEEEe-C-CCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 327 -DFLICSF--YQIFGENPSGFGCLFVK-K-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 327 -Df~~~S~--hK~~G~~P~G~G~L~Vr-~-~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
|++++|| +|++| +.|.|.+++. + +..+.+.+....|... .++.. ..|
T Consensus 174 ~di~~~Sf~~~K~l~--~~g~gg~~~~~~~~l~~~~~~~~~~g~~~------~~~~~--------------------~~g 225 (367)
T 3nyt_A 174 STVACTSFFPSAPLG--CYGDGGAIFTNDDELATAIRQIARHGQDR------RYHHI--------------------RVG 225 (367)
T ss_dssp SSEEEEECCTTSSSC--CSSCCEEEEESCHHHHHHHHHHTBTTEEE------TTEEC--------------------SCC
T ss_pred CCEEEEECCCCCcCC--CcCceeEEEeCCHHHHHHHHHHHhcCCCc------Cceee--------------------ccC
Confidence 9999997 79999 5454444444 3 3334443322112210 00000 001
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
.. + ....+.+. .++..++ .++.+.+|.+.+.+++.+.|
T Consensus 226 ~~-~--------------~~~~~~aa-------------------------~~~~~l~--~~~~~~~~~~~~~~~~~~~L 263 (367)
T 3nyt_A 226 VN-S--------------RLDTLQAA-------------------------ILLPKLE--IFEEEIALRQKVAAEYDLSL 263 (367)
T ss_dssp CB-C--------------CCCHHHHH-------------------------HHHHHHH--THHHHHHHHHHHHHHHHHHH
T ss_pred cC-C--------------CccHHHHH-------------------------HHHHHHH--HHHHHHHHHHHHHHHHHHHh
Confidence 10 0 00111110 2222232 46778889999999999999
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCC-CcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDR-GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~r-g~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
.++ | +++......... ..++.+.+. +.+.+.+.+.++||.++.++.+.......+..
T Consensus 264 ~~~------~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~------ 321 (367)
T 3nyt_A 264 KQV------G---IGTPFIEVNNISVYAQYTVRMD-------NRESVQASLKAAGVPTAVHYPIPLNKQPAVAD------ 321 (367)
T ss_dssp HHT------T---CCCCCCCTTEECCCSSEEEECS-------SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCC------
T ss_pred ccC------C---eeccCCCCCCceeeEEEEEEeC-------CHHHHHHHHHHCCCceeccCCCccccChhhhc------
Confidence 987 2 111111100011 122333222 45667777777899999875322211111100
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
....+... .......||++++..+|.+||+++++.|+++
T Consensus 322 -~~~~~~~~---------~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 322 -EKAKLPVG---------DKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp -TTCCCHHH---------HHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred -cCCCChHH---------HHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 00000000 0112369999999999999999999998764
No 133
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.84 E-value=7.1e-20 Score=197.59 Aligned_cols=297 Identities=13% Similarity=0.049 Sum_probs=201.8
Q ss_pred HHHHHHHHHHc----CCCCCC-ccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 173 SAMKKRIMDFL----NISEND-YGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~e-y~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.+.|+.|++++ |++.+. ..|+||+|+|+|+.+++.++ .++||+|++ ...|++ . ...++..|++++.++
T Consensus 88 ~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~v~ 161 (404)
T 2o1b_A 88 EAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCV-INPGDYVLLPDPGYTD-Y----LAGVLLADGKPVPLN 161 (404)
T ss_dssp HHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCSS-H----HHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHh-cCCCCEEEEcCCCchh-H----HHHHHHCCCEEEEec
Confidence 46777888877 875221 37999999999999999998 678999765 456664 2 234567899999999
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCC-CCCCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKD-MDSFGL 321 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~-m~~ldl 321 (632)
.+.....+|+++|+++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++..... -.+.++
T Consensus 162 ~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~ 235 (404)
T 2o1b_A 162 LEPPHYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSI 235 (404)
T ss_dssp CCTTTCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCG
T ss_pred cCcccCcCCHHHHHHhhccC------ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCh
Confidence 87423347889999888654 489999999999999997 56 78899999999999999876320 012222
Q ss_pred C----CCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhh
Q 006746 322 S----LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 395 (632)
Q Consensus 322 s----~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 395 (632)
. ..+.|+++.|++|+||. .| +|+++++++.++.+..... .|
T Consensus 236 ~~~~~~~~~~i~~~s~sK~~g~--~G~r~G~~~~~~~~~~~l~~~~~------------~~------------------- 282 (404)
T 2o1b_A 236 LASENGKDVAIEIYSLSKGYNM--SGFRVGFAVGNKDMIQALKKYQT------------HT------------------- 282 (404)
T ss_dssp GGSTTHHHHEEEEEESTTTTTC--GGGCCEEEEECHHHHHHHHHHHH------------HH-------------------
T ss_pred hhcCCCCCCEEEEEecchhccC--chhheEeEecCHHHHHHHHHHHh------------hc-------------------
Confidence 1 12568999999999983 46 6999887766544422100 00
Q ss_pred hhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHH
Q 006746 396 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 396 ~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~ 475 (632)
. ++.+.+...++. ++|+.. ...++.+.++.+.+.+
T Consensus 283 ----~----------------~~~~~~~~~a~~------------------------~~l~~~-~~~~~~~~~~~~~~~~ 317 (404)
T 2o1b_A 283 ----N----------------AGMFGALQDAAI------------------------YALNHY-DDFLEEQSNVFKTRRD 317 (404)
T ss_dssp ----C----------------CCCCHHHHHHHH------------------------HHHHHC-HHHHHHHHHHHHHHHH
T ss_pred ----c----------------CCCCHHHHHHHH------------------------HHHhcC-HHHHHHHHHHHHHHHH
Confidence 0 001111112221 444432 1246778888999999
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHH-HHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLV-QKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V-~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
+|.+.|.++ | ++++.|. .+-.+.+.+.+ + ++...+ +++++++||.++.|..|..
T Consensus 318 ~l~~~L~~~------g---~~~~~~~----~g~~~~~~~~~--~--~~~~~l~~~l~~~~gi~v~~g~~f~~-------- 372 (404)
T 2o1b_A 318 RFEAMLAKA------D---LPFVHAK----GGIYVWLETPP--G--YDSEQFEQFLVQEKSILVAPGKPFGE-------- 372 (404)
T ss_dssp HHHHHHHHT------T---CCEECCC----BSSEEEEECCT--T--CCHHHHHHHHHHHHCEECEESGGGCG--------
T ss_pred HHHHHHHhc------C---CeecCCC----cceEEEEeCCC--C--CCHHHHHHHHHHHCCEEEeCchhhCc--------
Confidence 999999886 3 3444442 23345666642 1 344444 5566678999998754431
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.+.||+|++. +.+|++++++.|+++++.
T Consensus 373 --------------------------~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 373 --------------------------NGNRYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp --------------------------GGTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred --------------------------CCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 023589999996 789999999999988754
No 134
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.84 E-value=1.1e-19 Score=193.36 Aligned_cols=296 Identities=11% Similarity=0.050 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHc----CCCCCCc-cEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEE
Q 006746 171 LESAMKKRIMDFL----NISENDY-GMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMS 244 (632)
Q Consensus 171 ~~~~~R~~ia~~l----~a~~~ey-~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~ 244 (632)
-..+.|+.|++++ |++.+.. .|+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.
T Consensus 64 ~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~p~y~~-----~~~~~~~~g~~~~~ 137 (376)
T 2dou_A 64 CTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLAL-TEPEDLLLLPEVAYPS-----YFGAARVASLRTFL 137 (376)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCHH-----HHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHh-cCCCCEEEECCCCcHh-----HHHHHHHcCCEEEE
Confidence 3467888888888 8763222 7999999999999999998 6789997754 45553 23445678999999
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccCCC----CC
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALGPK----DM 316 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~g~----~m 316 (632)
++.+ ....+|.++|++++.++ ++++++++.+|+||..+|. + |+++|+++|+++++|.++.... ..
T Consensus 138 ~~~~-~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 210 (376)
T 2dou_A 138 IPLR-EDGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAP 210 (376)
T ss_dssp ECBC-TTSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCC
T ss_pred eeCC-CCCCCCHHHHHHhhccC------ceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 9883 34457888998888654 4899999999999999984 5 7788999999999999987531 00
Q ss_pred CCCCC-CCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 317 DSFGL-SLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 317 ~~ldl-s~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
..+++ ...+.++++.|++|.+| +.| +|+++.+++.++.+..... .|
T Consensus 211 ~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~------------~~----------------- 259 (376)
T 2dou_A 211 SPLALPGAKERVVELFSLSKSYN--LAGFRLGFALGSEEALARLERVKG------------VI----------------- 259 (376)
T ss_dssp CGGGSTTGGGTEEEEEEHHHHHT--CGGGCCEEEEECHHHHHHHHHHHH------------HH-----------------
T ss_pred ChhhcCCCCCcEEEEecchhhcC--ChhheeEEEecCHHHHHHHHHHHH------------hc-----------------
Confidence 11222 22456899999999998 446 6999887766544422100 00
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.. +.+.+...++. ++|+.. ...++.+.++.+.+
T Consensus 260 ------~~----------------~~~~~~~~a~~------------------------~~l~~~-~~~~~~~~~~~~~~ 292 (376)
T 2dou_A 260 ------DF----------------NQYAGVLRMGV------------------------EALKTP-KEVVRGYARVYRER 292 (376)
T ss_dssp ------CC----------------CSCHHHHHHHH------------------------HHHTSC-HHHHHHHHHHHHHH
T ss_pred ------cc----------------CCCHHHHHHHH------------------------HHHhCc-HHHHHHHHHHHHHH
Confidence 00 00111112121 334321 12367777888888
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
.++|.+.|.++ ++++.|. .+..+.+.+.+ + ++...+.+.+.++||.++.|..|..
T Consensus 293 ~~~l~~~L~~~----------~~~~~~~----~~~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~g~~f~~------- 347 (376)
T 2dou_A 293 ALGMAEALKGV----------LSLLPPR----ATMYLWGRLPE--G--VDDLEFGLRLVERGVALAPGRGFGP------- 347 (376)
T ss_dssp HHHHHHHHTTT----------SEECCCC----BSSEEEEECCT--T--CCHHHHHHHHHHTTEECEEGGGGCG-------
T ss_pred HHHHHHHHHHh----------cCccCCC----eeEEEEEECCC--C--CCHHHHHHHHHHCCEEEcCchhhCC-------
Confidence 89998888653 3444432 23445566653 1 4555555544455999987754421
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.+.+.||+|++. +.+||+++++.|+++++
T Consensus 348 ---------------------------~~~~~~Ris~~~--~~~~i~~~l~~l~~~l~ 376 (376)
T 2dou_A 348 ---------------------------GGKGFVRIALVR--PLEELLEAAKRIREALD 376 (376)
T ss_dssp ---------------------------GGTTEEEEECCS--CHHHHHHHHHHHHHTC-
T ss_pred ---------------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHhC
Confidence 023689999985 89999999999988764
No 135
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.83 E-value=1.1e-19 Score=195.34 Aligned_cols=346 Identities=10% Similarity=0.073 Sum_probs=211.2
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccc-hhHHHHHHHHHHHHHcCCCCCCccE
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ-ESGLESAMKKRIMDFLNISENDYGM 192 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~-~~~~~~~~R~~ia~~l~a~~~ey~v 192 (632)
+++..+.++.+++++.+.+... | ..+++.+.+..+.. .....+.+|+.+++++|++++ .|
T Consensus 36 ~~~~n~~~~~v~~a~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--~v 96 (420)
T 3gbx_A 36 IASENYTSPRVMQAQGSQLTNK--------Y---------AEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYA--NV 96 (420)
T ss_dssp CTTCCCCCHHHHHHHTSGGGGC--------C---------C--------------CHHHHHHHHHHHHHHHTCSEE--EC
T ss_pred eccCCCCCHHHHHHHHHHHhcc--------c---------ccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCc--ee
Confidence 4555567999999987654211 0 01233322211111 134566788999999999754 45
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCC
Q 006746 193 VFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKK 271 (632)
Q Consensus 193 vft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~ 271 (632)
++| ++|+|+.+++.++ +++||+|++. ..|++....+..-.....++.+..++.+ .++.+|+++|+++|++++
T Consensus 97 ~~~-sGs~a~~~a~~~~-~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~---- 169 (420)
T 3gbx_A 97 QPH-SGSQANFAVYTAL-LQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID-ESGKIDYDEMAKLAKEHK---- 169 (420)
T ss_dssp CCS-SHHHHHHHHHHHH-CCTTCEEEEEEEC------------CHHHHSEEEEEEEC-TTCSCCHHHHHHHHHHHC----
T ss_pred Eec-CcHHHHHHHHHHh-cCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC-ccCCcCHHHHHHHHHhcC----
Confidence 455 5589999998888 7899997654 4555422222211112234555566666 667799999999998642
Q ss_pred ceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCC---CCCCCCCCCCCCcEEEEccccccCCCCCceEEE
Q 006746 272 QRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPK---DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCL 347 (632)
Q Consensus 272 ~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~---~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L 347 (632)
++++++.+.++ |...|++ |.++|+++|+++++|.+|..+. ...+..+. .+|++++|+||++|. |.| |++
T Consensus 170 -~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~di~~~s~sK~~~g-~~g-g~~ 242 (420)
T 3gbx_A 170 -PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP--HAHVVTTTTHKTLAG-PRG-GLI 242 (420)
T ss_dssp -CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT--TSSEEEEESSGGGCS-CSC-EEE
T ss_pred -CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc--cCCEEEeecccCCCC-CCc-eEE
Confidence 47888866443 6789999 9999999999999999976532 00122222 489999999998843 777 888
Q ss_pred EEeCC---CccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchh
Q 006746 348 FVKKS---TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEI 424 (632)
Q Consensus 348 ~Vr~~---~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i 424 (632)
+.++. ..+.+....+. ++ .|+++.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~-------------------------------------~~-------------~~~~~~~~~ 272 (420)
T 3gbx_A 243 LAKGGDEELYKKLNSAVFP-------------------------------------SA-------------QGGPLMHVI 272 (420)
T ss_dssp EESSCCHHHHHHHHHHHC------------------------------------------------------CCCCHHHH
T ss_pred EEcCCcHHHHHHhhhhcCC-------------------------------------CC-------------CCCcchhHH
Confidence 88773 32222211000 00 112222333
Q ss_pred hHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCC
Q 006746 425 SEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRF 504 (632)
Q Consensus 425 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~ 504 (632)
.++. .++......+++.+.++.+.+.+++.+.|.++ | ++++.+.
T Consensus 273 ~a~~------------------------~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~--- 316 (420)
T 3gbx_A 273 AGKA------------------------VALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR------G---YKVVSGG--- 316 (420)
T ss_dssp HHHH------------------------HHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT------T---CEEGGGS---
T ss_pred HHHH------------------------HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc------C---CeeccCC---
Confidence 3332 34433323356788899999999999999885 4 4454431
Q ss_pred CCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCcc-CChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCC
Q 006746 505 DRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSL-HHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 583 (632)
Q Consensus 505 ~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~-c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 583 (632)
..+.++.+.+.+. .++...+.+++.++||.++.+.. .+.+ .....
T Consensus 317 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~~~~~~-------------------------------~~~~~ 362 (420)
T 3gbx_A 317 TENHLFLLDLVDK---NLTGKEADAALGRANITVNKNSVPNDPK-------------------------------SPFVT 362 (420)
T ss_dssp CSSSEEEEECGGG---TCCHHHHHHHHHHTTEECEEECCTTCSS-------------------------------CTTTC
T ss_pred CCCeEEEEEcCCC---CCCHHHHHHHHHHCCcEeccccCCCCcc-------------------------------ccCCC
Confidence 3466766666531 15677888888889999875210 0000 11223
Q ss_pred cEEEEccCCCCC----HHHHHHHHHHHHHhhhh
Q 006746 584 TVVTASLGYLAN----FEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 584 ~~VRvSlg~~~t----~eDV~rlv~~l~~~l~~ 612 (632)
..||+++...++ .+||+++++.|++.|+.
T Consensus 363 ~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 363 SGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp SEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred cceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 469999987754 89999999999998866
No 136
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.83 E-value=9.1e-19 Score=187.30 Aligned_cols=323 Identities=10% Similarity=0.128 Sum_probs=213.0
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+.-|||+++. |..++.+++++.+.+...... .+ . + ..+..++.+++++
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-----------------~~---~--~---~~~~~~~l~~~la 88 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLT-----------------SR---A--F---HSDQLGPWYEKVA 88 (392)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCC-----------------CT---T--S---EETTHHHHHHHHH
T ss_pred CCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcccc-----------------cc---c--c---CCHHHHHHHHHHH
Confidence 45779999763 335788888876544321000 00 0 0 1245678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC---------CCCCeEEE-eccccchhhHHHHHHHHh----c-----CCE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF---------MSVKNLLT-VYDYESEAVEAMIRTSEK----R-----GAR 241 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~---------~~gd~ilt-~~d~~s~~v~~~~~~a~~----~-----G~~ 241 (632)
+++|. + .++||+|+|+|+.+++..+.- ..+++|++ ...||+.....+ ..... . ...
T Consensus 89 ~~~g~--~--~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 163 (392)
T 3ruy_A 89 KLTNK--E--MVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAV-SMSSNEEYKRGFGPMLPG 163 (392)
T ss_dssp HHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHH-HTCSCTTTTTTCCSCCSS
T ss_pred HhcCC--C--EEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhh-hccCChhhccccCCCCCC
Confidence 99983 3 699999999999998876521 12557665 557776322221 11000 0 012
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc-CCCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL-GPKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~g~~ 315 (632)
+..++. .|+++|+++|++ ++++|++.+.+|+||..+| ++ |.++|+++|+++++|.++. ++..
T Consensus 164 ~~~~~~------~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~ 231 (392)
T 3ruy_A 164 IIVIPY------GDLEALKAAITP------NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRT 231 (392)
T ss_dssp EEEECT------TCHHHHHHHCCT------TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTT
T ss_pred CeeeCc------ccHHHHHHHhcc------CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcc
Confidence 433333 278899988874 3599999999999999999 99 9999999999999999985 2221
Q ss_pred --CCCCCCCCCCCcEEEEccccccCCCC--CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 316 --MDSFGLSLVRPDFLICSFYQIFGENP--SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 316 --m~~ldls~~~~Df~~~S~hK~~G~~P--~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
...++.....+|++++| |.++ + ..+|+++++++.++.+.+...+++ |
T Consensus 232 g~~~~~~~~~~~~d~~~~S--K~l~--gG~~~~G~~~~~~~~~~~~~~~~~~~~----------~--------------- 282 (392)
T 3ruy_A 232 GKVFACDWDNVTPDMYILG--KALG--GGVFPISCAAANRDILGVFEPGSHGST----------F--------------- 282 (392)
T ss_dssp SSSSGGGGGTCCCSEEEEC--GGGG--TTTSCCEEEEECHHHHTTCCTTSSCCS----------S---------------
T ss_pred ccchhhhccCCCCCEEEEc--hhhh--CChhhhEEEEECHHHHhhhccCCcCCC----------C---------------
Confidence 11223333467998776 9766 3 248999998877665544221100 0
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGR 471 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~ 471 (632)
+.+.+...++. ++|+.+.. +.+.++.+
T Consensus 283 --------------------------~~~~~~~~a~~------------------------~~l~~~~~---~~~~~~~~ 309 (392)
T 3ruy_A 283 --------------------------GGNPLACAVSI------------------------AALEVLEE---EKLTERSL 309 (392)
T ss_dssp --------------------------TTCHHHHHHHH------------------------HHHHHHHH---TTHHHHHH
T ss_pred --------------------------CCCHHHHHHHH------------------------HHHHHHHh---hhHHHHHH
Confidence 00111122222 56666543 67788999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhH
Q 006746 472 CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDK 551 (632)
Q Consensus 472 ~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~ 551 (632)
.+.+++.+.|.++ +.+.+.... ..+.++.+.+.+ +...+.+.+.++||.++.|
T Consensus 310 ~~~~~l~~~L~~~------~~~~~~~~~-----~~g~~~~~~~~~------~~~~l~~~l~~~gi~v~~~---------- 362 (392)
T 3ruy_A 310 QLGEKLVGQLKEI------DNPMITEVR-----GKGLFIGIELNE------PARPYCEQLKAAGLLCKET---------- 362 (392)
T ss_dssp HHHHHHHHHHTTC------CCTTEEEEE-----EETTEEEEEESS------CSHHHHHHHHTTTEECCCB----------
T ss_pred HHHHHHHHHHHHh------cCCCceEEE-----eeeeEEEEEEcc------hHHHHHHHHHHCCcEEecC----------
Confidence 9999999999988 335454432 257888888754 3345555555789988743
Q ss_pred HHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 552 YQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 552 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
..+.||+|+++.+|.+|++++++.|++++
T Consensus 363 ------------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 363 ------------------------------HENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ------------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 23599999999999999999999999876
No 137
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.83 E-value=8.2e-20 Score=197.20 Aligned_cols=304 Identities=10% Similarity=0.055 Sum_probs=202.2
Q ss_pred HHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|+++++ ++++ ..|+||+|+|+|+++++.++ .++||+|++ ...|++ + ...++..|++++.++
T Consensus 71 ~lr~~la~~~~~~~g~~~~~~-~~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~--~---~~~~~~~g~~~~~~~ 143 (422)
T 3fvs_A 71 PLTKILASFFGELLGQEIDPL-RNVLVTVGGYGALFTAFQAL-VDEGDEVIIIEPFFDC--Y---EPMTMMAGGRPVFVS 143 (422)
T ss_dssp HHHHHHHHHHHHHHTCCCCHH-HHEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--H---HHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCCC-CcEEEECChHHHHHHHHHHH-cCCCCEEEEcCCCchh--h---HHHHHHcCCEEEEEe
Confidence 45555555554 4431 37999999999999999998 789999765 446654 2 334567899999999
Q ss_pred ccC-----------CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc---chH-HHHHHhhCCcEEEEecccc
Q 006746 247 FSW-----------PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY---PYL-WMRIAQENDWHILIDACAL 311 (632)
Q Consensus 247 ~~~-----------~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~---pl~-i~~~a~~~g~~vlvDaaq~ 311 (632)
.++ .+..+++++|+++++++ ++++++++.+|+||..+ +++ |+++|+++|+++++|.++.
T Consensus 144 ~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 217 (422)
T 3fvs_A 144 LKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ 217 (422)
T ss_dssp CBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred cccccccccccccccCCCCCHHHHHhhcCCC------ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccch
Confidence 873 13358999998887643 58999999999999999 477 8899999999999999987
Q ss_pred C----CCCCCCCCCC----CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 312 G----PKDMDSFGLS----LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 312 ~----g~~m~~ldls----~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
. +. ...++. .++.++++.|++|.||.+..++|+++++++.++.+......
T Consensus 218 ~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-------------------- 275 (422)
T 3fvs_A 218 WMVYDGH--QHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQN-------------------- 275 (422)
T ss_dssp TCBCTTC--CCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHT--------------------
T ss_pred hhccCCC--CCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhh--------------------
Confidence 5 32 122222 23456999999999983212378888777655433221000
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHH-----
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQV----- 458 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~----- 458 (632)
. . .+.+.+...++. ++|+..
T Consensus 276 -----------------~--~------------~~~~~~~~~a~~------------------------~~l~~~~~~~~ 300 (422)
T 3fvs_A 276 -----------------S--V------------FHCPTQSQAAVA------------------------ESFEREQLLFR 300 (422)
T ss_dssp -----------------T--T------------CCCCHHHHHHHH------------------------HHHHHHHHTTT
T ss_pred -----------------c--c------------CCCCcHHHHHHH------------------------HHHhhcccccc
Confidence 0 0 001111122221 344321
Q ss_pred -HhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC----------CCccCHHHH
Q 006746 459 -DSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK----------REKIEPVLV 527 (632)
Q Consensus 459 -~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~----------G~~i~~~~V 527 (632)
....++.+.++.+.+.++|.+.|.++ | ++++.|. .+..+.+.+.... .+....+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (422)
T 3fvs_A 301 QPSSYFVQFPQAMQRCRDHMIRSLQSV------G---LKPIIPQ----GSYFLITDISDFKRKMPDLPGAVDEPYDRRFV 367 (422)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHTT------T---CEEEBCS----BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHc------C---CeecCCC----eeeEEEEechhhcccccccccccccccHHHHH
Confidence 01236788899999999999999887 4 4555553 3445555543210 000023556
Q ss_pred HHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHH
Q 006746 528 QKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 607 (632)
Q Consensus 528 ~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~ 607 (632)
.++++++||.+..|..|..... ...+.+.||+|++. +.+||+.+++.|+
T Consensus 368 ~~ll~~~gv~v~~g~~f~~~~~-----------------------------~~~~~~~iRis~~~--~~e~i~~~l~~l~ 416 (422)
T 3fvs_A 368 KWMIKNKGLVAIPVSIFYSVPH-----------------------------QKHFDHYIRFCFVK--DEATLQAMDEKLR 416 (422)
T ss_dssp HHHHHHHCEECEEGGGGSCHHH-----------------------------HTTSCSEEEEECCC--CHHHHHHHHHHHH
T ss_pred HHHHHhcCEEEeCcHHhcCCcC-----------------------------CCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 6778888999998877654310 01245799999887 9999999999999
Q ss_pred Hhhh
Q 006746 608 QFLD 611 (632)
Q Consensus 608 ~~l~ 611 (632)
+++.
T Consensus 417 ~~l~ 420 (422)
T 3fvs_A 417 KWKV 420 (422)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8874
No 138
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.83 E-value=3.1e-19 Score=190.99 Aligned_cols=294 Identities=15% Similarity=0.140 Sum_probs=193.6
Q ss_pred HHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 174 AMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
+.|+.|++++ |++.+...|++|+|+|+|+.+++.++ +++||+|++ ...|+. ....++..|++++.++.+
T Consensus 72 ~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~-----~~~~~~~~g~~~~~v~~~ 145 (385)
T 1b5p_A 72 ELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAI-LDPGDEVIVLSPYWVS-----YPEMVRFAGGVVVEVETL 145 (385)
T ss_dssp HHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH-----HHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHh-cCCCCEEEEcCCCchh-----HHHHHHHcCCEEEEeecC
Confidence 5677777766 43222237999999999999999998 789999765 456653 234567789999999987
Q ss_pred C-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCCC-CCCCCC
Q 006746 249 W-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKDM-DSFGLS 322 (632)
Q Consensus 249 ~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~m-~~ldls 322 (632)
. .+..+++++|+++++++ ++++++++.+|+||..+| ++ |+++|+++|+++++|.++.....- ....+.
T Consensus 146 ~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 219 (385)
T 1b5p_A 146 PEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPG 219 (385)
T ss_dssp GGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGG
T ss_pred cccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHH
Confidence 3 23468999998877643 589999999999999988 67 889999999999999986642100 011222
Q ss_pred CC--CCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhh
Q 006746 323 LV--RPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 398 (632)
Q Consensus 323 ~~--~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~ 398 (632)
.+ +.++++.|++|.+| +.| +|+++++++.++.+.+...
T Consensus 220 ~~~~~~~i~~~s~SK~~~--~~G~RiG~~~~~~~~~~~l~~~~~------------------------------------ 261 (385)
T 1b5p_A 220 RVAPEHTLTVNGAAKAFA--MTGWRIGYACGPKEVIKAMASVSR------------------------------------ 261 (385)
T ss_dssp GTCTTTEEEEEESTTTTT--CGGGCCEEEECCHHHHHHHHHHHH------------------------------------
T ss_pred HcCCCCEEEEEechhhcC--CcccceEEEEeCHHHHHHHHHHHh------------------------------------
Confidence 22 56899999999999 558 8999987765544332100
Q ss_pred hccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHH---HHhhCHHHHHHHHHHHHH
Q 006746 399 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ---VDSLGLTMISRRGRCLIN 475 (632)
Q Consensus 399 e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~---~~~~Gl~~I~~r~~~L~~ 475 (632)
.++.. .+.+...++ .++|+. ..+ .++.+.++.+...+
T Consensus 262 -~~~~~--------------~~~~~~~a~------------------------~~~l~~~~~~~~-~~~~~~~~~~~~~~ 301 (385)
T 1b5p_A 262 -QSTTS--------------PDTIAQWAT------------------------LEALTNQEASRA-FVEMAREAYRRRRD 301 (385)
T ss_dssp -TTTCS--------------CCHHHHHHH------------------------HHHHHCHHHHHH-HHHHHHHHHHHHHH
T ss_pred -hccCC--------------CCHHHHHHH------------------------HHHHhCCCcchH-HHHHHHHHHHHHHH
Confidence 00000 000000111 134432 111 26677888888889
Q ss_pred HHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHh
Q 006746 476 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 555 (632)
Q Consensus 476 ~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~ 555 (632)
++.+.|.++ | ++++.|. -+..+-..+.. .| ++...+.+.+.++||.++.|..|.
T Consensus 302 ~l~~~L~~~------g---~~~~~~~----~~~~~~~~~~~-~~--~~~~~l~~~l~~~gv~v~~g~~f~---------- 355 (385)
T 1b5p_A 302 LLLEGLTAL------G---LKAVRPS----GAFYVLMDTSP-IA--PDEVRAAERLLEAGVAVVPGTDFA---------- 355 (385)
T ss_dssp HHHHHHHHH------T---CCBCCCS----BTTEEEEECTT-TC--SSHHHHHHHHHHTTEECEESGGGT----------
T ss_pred HHHHHHHHC------C---CeecCCC----eeEEEEEecCC-CC--CCHHHHHHHHHHCCeEEecccccC----------
Confidence 999999886 3 2334432 12233334431 12 455555554448899998774331
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|++ ++.+++++.++.|+++++
T Consensus 356 --------------------------~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 356 --------------------------AFGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp --------------------------CTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred --------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 1358999988 899999999988877654
No 139
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.83 E-value=1.6e-19 Score=195.90 Aligned_cols=310 Identities=13% Similarity=0.072 Sum_probs=202.7
Q ss_pred HHHHHHHHHHc----CCC-CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 173 SAMKKRIMDFL----NIS-ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~-~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
.+.|+.|++++ |.+ .+...|+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.++
T Consensus 88 ~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-----~~~~~~~~g~~~~~v~ 161 (425)
T 1vp4_A 88 PVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLF-LDDESYCVLDDPAYLG-----AINAFRQYLANFVVVP 161 (425)
T ss_dssp HHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCHH-----HHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHh-CCCCCEEEEeCCCcHH-----HHHHHHHcCCEEEEec
Confidence 46788888888 843 22237999999999999999998 6789997654 45553 2344567899999999
Q ss_pred ccCCccccCHHHHHHHHHhcCc--CCCceeEE-EEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccCCCC--CC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGK--KKKQRGLF-VFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALGPKD--MD 317 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~--~~~~~~Lv-~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~g~~--m~ 317 (632)
.+. ++ +++++|+++|++... ...+++++ +++..+|+||..+|. + |+++|+++|+++++|.++....- -.
T Consensus 162 ~~~-~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 239 (425)
T 1vp4_A 162 LED-DG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGET 239 (425)
T ss_dssp EET-TE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCC
T ss_pred cCC-CC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC
Confidence 873 44 899999999975100 00135787 689999999999985 4 77889999999999999876210 01
Q ss_pred CCCC---CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchh
Q 006746 318 SFGL---SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKS 394 (632)
Q Consensus 318 ~ldl---s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 394 (632)
...+ ...+.++++.|++|+|| +...+|++++++++++.+..... .+
T Consensus 240 ~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~------------~~------------------ 288 (425)
T 1vp4_A 240 VDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRKIVQAKQ------------SA------------------ 288 (425)
T ss_dssp CCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHHHHHHHHH------------HH------------------
T ss_pred CcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHHHHHHHhh------------hh------------------
Confidence 1222 22356899999999999 31236999988766544322100 00
Q ss_pred hhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHH-HhhCHHHHHHHHHHH
Q 006746 395 KQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQV-DSLGLTMISRRGRCL 473 (632)
Q Consensus 395 ~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~-~~~Gl~~I~~r~~~L 473 (632)
..+ .+.+...++. ++|+.. ....++.+.++.+..
T Consensus 289 -----~~~----------------~~~~~~~a~~------------------------~~l~~~~~~~~~~~~~~~~~~~ 323 (425)
T 1vp4_A 289 -----DLC----------------SPAITHRLAA------------------------RYLERYDLLEQLKPTIELYRRK 323 (425)
T ss_dssp -----HSS----------------CCHHHHHHHH------------------------HHHHHSCHHHHTHHHHHHHHHH
T ss_pred -----cCC----------------CCHHHHHHHH------------------------HHHhcCCHHHHHHHHHHHHHHH
Confidence 000 0111111111 344331 011356777888888
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHH-HHHHHHHhCCcEEccCccCChHHHhHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPV-LVQKLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~-~V~kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
.+++.+.|.++.. +.|.++++.|. .+..+.+.+.+ + ++.. +.++|+++ ||.++.|..|...
T Consensus 324 ~~~l~~~L~~~~~----~~~g~~~~~~~----~g~~~~~~~~~--~--~~~~~l~~~l~~~-gi~v~~g~~f~~~----- 385 (425)
T 1vp4_A 324 RTVMLNALEEYFS----DIPGVKWVKSE----GGLFIWLTLPE--G--FDTWEMFEYAKRK-KVFYVPGRVFKVY----- 385 (425)
T ss_dssp HHHHHHHHHHHST----TSTTCEECCCS----BSSEEEEECCT--T--CCTTTTHHHHHHH-TEECEEGGGGCTT-----
T ss_pred HHHHHHHHHHhCC----CCCceEEecCC----ccEEEEEEcCC--C--CCHHHHHHHHHHC-CCEEECchhhcCC-----
Confidence 9999999987510 01146776552 35677777753 1 2333 44555555 9999877433220
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+.||+|++.. +.+||+++++.|++++..
T Consensus 386 ---------------------------~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 386 ---------------------------DEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp ---------------------------CCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHH
Confidence 11346999999986 999999999999998865
No 140
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.83 E-value=6.6e-19 Score=187.05 Aligned_cols=293 Identities=15% Similarity=0.081 Sum_probs=201.7
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCC
Q 006746 173 SAMKKRIMDFL-NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWP 250 (632)
Q Consensus 173 ~~~R~~ia~~l-~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~ 250 (632)
.+.|+.+++++ +++++ .|++|+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.++++++
T Consensus 66 ~~l~~~la~~~~~~~~~--~v~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~ 137 (375)
T 3op7_A 66 PAFKKSVSQLYTGVKPE--QILQTNGATGANLLVLYSL-IEPGDHVISLYPTYQQ-----LYDIPKSLGAEVDLWQIEEE 137 (375)
T ss_dssp HHHHHHHHTTSSSCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESSCTH-----HHHHHHHTTCEEEEEEEEGG
T ss_pred HHHHHHHHHHhccCChh--hEEEcCChHHHHHHHHHHh-cCCCCEEEEeCCCchh-----HHHHHHHcCCEEEEEecccc
Confidence 47899999998 46654 7999999999999999998 7899997754 45553 23446778999999998743
Q ss_pred -ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCCCCCCC--CCCC
Q 006746 251 -RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPKDMDSF--GLSL 323 (632)
Q Consensus 251 -~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~~m~~l--dls~ 323 (632)
+..+|+++|+++++++ +++++++..+|+||..+| ++ |+++|+++|+++++|.++..... .++ -.+.
T Consensus 138 ~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~-~~~~~~~~~ 210 (375)
T 3op7_A 138 NGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSE-LDVPSIIEV 210 (375)
T ss_dssp GTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSS-SCCCCHHHH
T ss_pred CCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccc-cCCCchhhh
Confidence 3347999999998754 488999999999999999 88 99999999999999999765321 111 0123
Q ss_pred CCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhcc
Q 006746 324 VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 401 (632)
Q Consensus 324 ~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~g 401 (632)
++.++++.|++|.+|. .| +|++++++++++.+..... .+
T Consensus 211 ~~~~i~~~s~sK~~~~--~G~r~G~v~~~~~l~~~~~~~~~------------~~------------------------- 251 (375)
T 3op7_A 211 YDKGIAVNSLSKTYSL--PGIRIGWVAANHQVTDILRDYRD------------YT------------------------- 251 (375)
T ss_dssp CTTEEEEEESSSSSSC--GGGCCEEEECCHHHHHHHTTTGG------------GT-------------------------
T ss_pred cCCEEEEeEChhhcCC--cccceEEEEeCHHHHHHHHHHHh------------hh-------------------------
Confidence 4567999999999983 35 5998887766555433110 00
Q ss_pred ccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Q 006746 402 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 481 (632)
Q Consensus 402 t~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L 481 (632)
+ +. .+.+..... ..+|+..+. .+++..++.+...+++.+.|
T Consensus 252 ~--~~------------~~~~~~~~~------------------------~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l 292 (375)
T 3op7_A 252 M--IC------------AGVFDDLVA------------------------QLALAHYQE-ILERNRHILEENLAILDQWI 292 (375)
T ss_dssp T--SC------------CCHHHHHHH------------------------HHHHHTHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred c--cC------------CCcHHHHHH------------------------HHHHhccHH-HHHHHHHHHHHHHHHHHHHH
Confidence 0 00 000001111 144554333 25677777788888899888
Q ss_pred HccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHH-HHHHHHhCCcEEccCccCChHHHhHHHHhhhhhh
Q 006746 482 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVL-VQKLADRENISLSYGSLHHIWFSDKYQKEKDNVL 560 (632)
Q Consensus 482 ~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~-V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l 560 (632)
.++ |.++++.|. .+..+.+.+... .+... +++++.++||.++.|..+.
T Consensus 293 ~~~--------~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~ll~~~gi~v~~g~~~~--------------- 341 (375)
T 3op7_A 293 EEE--------PLVSYIRPA----VVSTSFVKIAVD----MPMEDFCLQLLQEHGVLLVPGNRFE--------------- 341 (375)
T ss_dssp HHC--------TTEEECCCS----SSSCEEEEECCS----SCHHHHHHHHHHHHCEECEEGGGGT---------------
T ss_pred hhC--------CCceEecCC----CeEEEeEEcCCC----CCHHHHHHHHHHhCCEEEeChhhhC---------------
Confidence 875 567776553 233333344321 34444 4566688899998663211
Q ss_pred hhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 561 EKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..+.||+|++.. .+||+++++.|+++++.
T Consensus 342 ---------------------~~~~iRi~~~~~--~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 342 ---------------------RDGYVRLGFACE--QETLIKGLEKLSQFLRR 370 (375)
T ss_dssp ---------------------CTTEEEECCCSC--HHHHHHHHHHHHHHHGG
T ss_pred ---------------------CCCeEEEEecCC--HHHHHHHHHHHHHHHHH
Confidence 136899998754 49999999999998864
No 141
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.83 E-value=2.3e-19 Score=193.28 Aligned_cols=351 Identities=10% Similarity=0.057 Sum_probs=213.7
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccch-hHHHHHHHHHHHHHcCCCCCCcc
Q 006746 113 DYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE-SGLESAMKKRIMDFLNISENDYG 191 (632)
Q Consensus 113 D~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~-~~~~~~~R~~ia~~l~a~~~ey~ 191 (632)
..++..++++.+++++.+.+... | ..+++...+..+... ....+.+|+.+++++|+++ .
T Consensus 37 l~~~~~~~~~~v~~a~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~---~ 96 (425)
T 3ecd_A 37 LIASENIVSRAVLDAQGSVLTNK--------Y---------AEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGH---A 96 (425)
T ss_dssp CCTTCCCCCHHHHHHHTSGGGSS--------C---------TTC------------CCHHHHHHHHHHHHHHTCSE---E
T ss_pred eecccCCCCHHHHHHHhhhhhcc--------c---------ccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCC---c
Confidence 34566677999999987654211 0 012232222111111 2445567799999999874 3
Q ss_pred EEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCC
Q 006746 192 MVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKK 270 (632)
Q Consensus 192 vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~ 270 (632)
.++++|+|+|+.+++.++ +++||+|++. ..|++....+........++++..++.+...+.+|+++|++++.+.
T Consensus 97 ~v~~~~Gs~a~~~al~~~-~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~---- 171 (425)
T 3ecd_A 97 NVQPHSGAQANGAVMLAL-AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQH---- 171 (425)
T ss_dssp ECCCSSHHHHHHHHHHHH-CCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHH----
T ss_pred eeecCchHHHHHHHHHHc-cCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhc----
Confidence 467899999999999988 7899997654 5665422222111112223355566665445678999999999742
Q ss_pred CceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCC--CCCCCCCCCCcEEEEccccccCCCCCceEEE
Q 006746 271 KQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDM--DSFGLSLVRPDFLICSFYQIFGENPSGFGCL 347 (632)
Q Consensus 271 ~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m--~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L 347 (632)
+++++++.+..| |...+++ |.++|+++|+++++|.+|+.+.-. ..... .-.+|++++|+||+++. |.| |++
T Consensus 172 -~~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~-~~~~di~~~s~sK~l~g-~~~-g~~ 245 (425)
T 3ecd_A 172 -KPSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANP-VEHAHVVTSTTHKTLRG-PRG-GFV 245 (425)
T ss_dssp -CCSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG-GGTCSEEEEESSGGGCC-CSC-EEE
T ss_pred -CCcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCc-hhcCcEEEecCCcccCC-CCc-EEE
Confidence 247888875444 8899999 999999999999999997553200 01111 11379999999997754 754 888
Q ss_pred EEeCC-CccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhH
Q 006746 348 FVKKS-TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISE 426 (632)
Q Consensus 348 ~Vr~~-~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~ 426 (632)
+.+++ ..+.+.+..+. ++ .|+++.+.+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~-------------------------------------~~-------------~~~~~~~~~~a 275 (425)
T 3ecd_A 246 LTNDEEIAKKINSAVFP-------------------------------------GL-------------QGGPLMHVIAG 275 (425)
T ss_dssp EESCHHHHHHHHHHHC-------------------------------------------------------CCCHHHHHH
T ss_pred EeCCHHHHHHHHhhhCc-------------------------------------cc-------------cCCccHHHHHH
Confidence 87753 32222221100 00 11122223333
Q ss_pred hhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCC
Q 006746 427 VRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR 506 (632)
Q Consensus 427 l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~r 506 (632)
+. .++......+++.+.++.+.+.++|.+.|.++ | ++++.|. ..
T Consensus 276 ~~------------------------~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~---~~ 319 (425)
T 3ecd_A 276 KA------------------------VAFGEALTDDFKTYIDRVLANAQALGDVLKAG------G---VDLVTGG---TD 319 (425)
T ss_dssp HH------------------------HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT------T---CEEGGGS---CS
T ss_pred HH------------------------HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC------C---CeeccCC---CC
Confidence 32 44444333457788999999999999999886 4 4555432 34
Q ss_pred CcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEE
Q 006746 507 GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVV 586 (632)
Q Consensus 507 g~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~V 586 (632)
+.++.+.+.+. .++...+.+++.++||.++.+.. ++... .....+.|
T Consensus 320 ~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~--p~~~~----------------------------~~~~~~~i 366 (425)
T 3ecd_A 320 NHLLLVDLRPK---GLKGAQVEQALERAGITCNKNGI--PFDPE----------------------------KPTITSGI 366 (425)
T ss_dssp SSEEEEECGGG---TCCHHHHHHHHHHTTEECEECCC--TTCSS----------------------------CTTTCSEE
T ss_pred ceEEEEEeCCC---CCCHHHHHHHHHHcCCEeccccc--CCCCC----------------------------CCCCccce
Confidence 66777776542 15678888888889999986531 11000 11234589
Q ss_pred EEccCCCCC----HHHHHHHHHHHHHhhhhc
Q 006746 587 TASLGYLAN----FEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 587 RvSlg~~~t----~eDV~rlv~~l~~~l~~~ 613 (632)
|++++.+++ .+||+++++.|++.++..
T Consensus 367 Ri~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 367 RLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp EEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 999877776 999999999999988764
No 142
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.83 E-value=1.9e-19 Score=188.97 Aligned_cols=209 Identities=9% Similarity=0.017 Sum_probs=142.7
Q ss_pred CceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCCC
Q 006746 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE 187 (632)
Q Consensus 108 ~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~~ 187 (632)
..++||+....+.++.+++++...... ...|+. .....+.|+++++++|++
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~--------------------------~~~y~~--~~~~~~l~~~la~~~g~~- 54 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVG--------------------------DDVYGE--DPTINELERLAAETFGKE- 54 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCC--------------------------CGGGTC--CHHHHHHHHHHHHHHTCS-
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCC--------------------------CcccCC--ChHHHHHHHHHHHHhCCc-
Confidence 468999999988888888887542210 001221 134568999999999985
Q ss_pred CCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhc
Q 006746 188 NDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 266 (632)
Q Consensus 188 ~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~ 266 (632)
.+++|+|+|+|+.+++.++ .++||+|++.. .|.+ .... ...++..|++++.+ .+ +++.+|+++|+++|++.
T Consensus 55 ---~~~~~~~gt~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v-~~-~~~~~d~~~l~~~i~~~ 126 (347)
T 1jg8_A 55 ---AALFVPSGTMGNQVSIMAH-TQRGDEVILEADSHIF-WYEV-GAMAVLSGVMPHPV-PG-KNGAMDPDDVRKAIRPR 126 (347)
T ss_dssp ---EEEEESCHHHHHHHHHHHH-CCTTCEEEEETTCHHH-HSST-THHHHHTCCEEEEE-CE-ETTEECHHHHHHHSCCS
T ss_pred ---eEEEecCcHHHHHHHHHHh-cCCCCEEEEcCcchhh-hccc-cchhhccCeEEEEe-cC-CCCccCHHHHHHHhccc
Confidence 4788999999999888887 68999987654 4433 2221 12345679999888 44 45668999999988642
Q ss_pred CcCCCceeEEEEeccCCCC-ccccch---H-HHHHHhhCCcEEEEeccccCCC-CCCCCCCCC--CCCcEEEEccccccC
Q 006746 267 GKKKKQRGLFVFPLHSRMT-GARYPY---L-WMRIAQENDWHILIDACALGPK-DMDSFGLSL--VRPDFLICSFYQIFG 338 (632)
Q Consensus 267 ~~~~~~~~Lv~~~~~sn~T-G~~~pl---~-i~~~a~~~g~~vlvDaaq~~g~-~m~~ldls~--~~~Df~~~S~hK~~G 338 (632)
....++++++.+++.+|+| |..+|. + |+++|+++|+++++|+++..+. .....++.. ..+|.+++|+||++|
T Consensus 127 ~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~ 206 (347)
T 1jg8_A 127 NIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLC 206 (347)
T ss_dssp CTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTC
T ss_pred cccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccC
Confidence 1001247999999999999 999886 4 7789999999999999874310 000111111 357999999999888
Q ss_pred CCCCceEEEEEeCCCcc
Q 006746 339 ENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 339 ~~P~G~G~L~Vr~~~~~ 355 (632)
. |.| |+++.+++.++
T Consensus 207 ~-~~G-~~~~~~~~~~~ 221 (347)
T 1jg8_A 207 A-PVG-SVVVGDRDFIE 221 (347)
T ss_dssp C-SSC-EEEEECHHHHH
T ss_pred C-Cce-EEEEcCHHHHH
Confidence 5 543 24454554443
No 143
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.83 E-value=1.7e-19 Score=195.56 Aligned_cols=306 Identities=14% Similarity=0.111 Sum_probs=199.5
Q ss_pred HHHHHHHHHHcC--------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEE
Q 006746 173 SAMKKRIMDFLN--------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVM 243 (632)
Q Consensus 173 ~~~R~~ia~~l~--------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~ 243 (632)
.+.|+.++++++ ++++ .|++|+|+|+++.+++.++ .++||+|++. ..|++ .. ..+++..|++++
T Consensus 86 ~~lr~~la~~~~~~~g~~~~~~~~--~i~~~~G~~~ai~~~~~~~-~~~gd~Vl~~~p~y~~-~~---~~~~~~~g~~~~ 158 (428)
T 1iay_A 86 PEFRKAIAKFMEKTRGGRVRFDPE--RVVMAGGATGANETIIFCL-ADPGDAFLVPSPYYPA-FN---RDLRWRTGVQLI 158 (428)
T ss_dssp HHHHHHHHHHHHHHTTTCSCCCTT--SCEEEEHHHHHHHHHHHHH-CCTTCEEEEESSCCTT-HH---HHTTTTTCCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCChh--hEEEccChHHHHHHHHHHh-CCCCCeEEEccCCCcc-hH---HHHHHhcCCEEE
Confidence 478888888887 6555 7999999999999999998 5789997755 45554 22 123345799999
Q ss_pred EEeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCCC-C-C
Q 006746 244 SAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGPK-D-M 316 (632)
Q Consensus 244 ~v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g~-~-m 316 (632)
.++.+.. ...+++++|++++++......++++++++..+|+||..+| ++ |+++|+++|+++++|.++.... . -
T Consensus 159 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~ 238 (428)
T 1iay_A 159 PIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP 238 (428)
T ss_dssp EECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS
T ss_pred EeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCC
Confidence 9988632 2357999999998752111224789999999999999999 88 8999999999999999987521 0 0
Q ss_pred CCCCCC---------CCCCc--EEEEccccccCCCCCce--EEEEEe-CCCccccCCCCCCCceeecccccccccccccC
Q 006746 317 DSFGLS---------LVRPD--FLICSFYQIFGENPSGF--GCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 317 ~~ldls---------~~~~D--f~~~S~hK~~G~~P~G~--G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
...++. .+++| +++.|++|.||. .|+ |++++. ++.++.+.... .+|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~--~Glr~G~~~~~~~~~~~~~~~~~------------~~~~----- 299 (428)
T 1iay_A 239 QFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGL--PGFRVGIIYSFNDDVVNCARKMS------------SFGL----- 299 (428)
T ss_dssp CCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSC--GGGCEEEEEESCHHHHHHHHHHH------------TTSC-----
T ss_pred CccCHHHhccccccccCCCCcEEEEecchhhcCC--CCceEEEEEeCCHHHHHHHHHHH------------hccc-----
Confidence 011111 12378 899999999994 474 999984 44443332100 0000
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHH--h
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD--S 460 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~--~ 460 (632)
.+.+...++. .+|+... +
T Consensus 300 ------------------------------------~~~~~~~a~~------------------------~~l~~~~~~~ 319 (428)
T 1iay_A 300 ------------------------------------VSTQTQYFLA------------------------AMLSDEKFVD 319 (428)
T ss_dssp ------------------------------------CCHHHHHHHH------------------------HHTTCHHHHH
T ss_pred ------------------------------------CCHHHHHHHH------------------------HHhcChHHHH
Confidence 0000111111 2232211 1
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC--ccCH-HHHHHHHHhCCcE
Q 006746 461 LGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE--KIEP-VLVQKLADRENIS 537 (632)
Q Consensus 461 ~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~--~i~~-~~V~kla~~~gI~ 537 (632)
..++.+.++++...++|.+.|.++ |. +++.+ ..+..+.+.+.+.... .... .+.++|++++||.
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~------g~---~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~ 386 (428)
T 1iay_A 320 NFLRESAMRLGKRHKHFTNGLEVV------GI---KCLKN----NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLN 386 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT------TC---CBCCC----SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc------CC---cccCC----CeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEE
Confidence 135677888889999999999887 32 33333 2355666766542100 0122 3445566667999
Q ss_pred EccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 538 LSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 538 lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
++.|..|.. .+.++||+|++ ..+.+|++++++.|+++++.
T Consensus 387 v~~~~~~~~----------------------------------~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 387 VSPGSSFEC----------------------------------QEPGWFRVCFA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp CEEGGGGTC----------------------------------SSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred EeCchhhCC----------------------------------CCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 987632221 12468999999 68999999999999998754
No 144
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.82 E-value=7.3e-19 Score=190.76 Aligned_cols=299 Identities=13% Similarity=0.108 Sum_probs=203.5
Q ss_pred HHHHHHHHHHc-----CCCCCCcc---EEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHh-cCCEE
Q 006746 173 SAMKKRIMDFL-----NISENDYG---MVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEK-RGARV 242 (632)
Q Consensus 173 ~~~R~~ia~~l-----~a~~~ey~---vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~-~G~~v 242 (632)
.+.|+.|++++ +++++ . |+||+|+|+|+.+++.++ .++||+|++. ..|++ ....++. .|+++
T Consensus 91 ~~lr~~ia~~~~~~~~~~~~~--~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-----~~~~~~~~~g~~~ 162 (430)
T 2x5f_A 91 EELRDLWQQKMLRDNPELSID--NMSRPIVTNALTHGLSLVGDLF-VNQDDTILLPEHNWGN-----YKLVFNTRNGANL 162 (430)
T ss_dssp HHHHHHHHHHHHHHCTTCCGG--GBCCCEEESHHHHHHHHHHHHH-CCTTCEEEEESSCCTH-----HHHHHTTTTCCEE
T ss_pred HHHHHHHHHHHhccCcccCCC--ccceEEEcCCchHHHHHHHHHH-hCCCCEEEEcCCcCcc-----HHHHHHHhcCCeE
Confidence 47899999999 88765 6 999999999999999998 6889997755 45553 2345566 89999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhh-----CCcEEEEeccccCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQE-----NDWHILIDACALGP 313 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~-----~g~~vlvDaaq~~g 313 (632)
+.++.+..++.+++++|++++++.. ++++++++++.+|+||..+| ++ |+++|++ +|+++++|.++...
T Consensus 163 ~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~ 239 (430)
T 2x5f_A 163 QTYPIFDKDGHYTTDSLVEALQSYN---KDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGL 239 (430)
T ss_dssp EEECCBCTTSCBCSHHHHHHHHHCC---SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTC
T ss_pred EEEeccCccCCcCHHHHHHHHHhcC---CCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccc
Confidence 9999874345689999999998621 24689999999999999999 77 8899999 99999999987642
Q ss_pred CC----CCCC--CCCC-CCC---cEEEEccccccCCCCCc--eEEEEE---eCCCccccCCCCCCCceeecccccccccc
Q 006746 314 KD----MDSF--GLSL-VRP---DFLICSFYQIFGENPSG--FGCLFV---KKSTVPILVDNTSSGMVSLLPAKKQLWLT 378 (632)
Q Consensus 314 ~~----m~~l--dls~-~~~---Df~~~S~hK~~G~~P~G--~G~L~V---r~~~~~~L~~~~~gG~v~~~~~~~~~~~~ 378 (632)
.. ..++ ++.. .+. ++++.|++|.|| +.| +|++++ +++.++.+.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~--~~G~riG~~~~~~~~~~~~~~l~~~~~---------------- 301 (430)
T 2x5f_A 240 FYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFF--AWGFRVGFMTFGTSDQTTKEVLEAKVK---------------- 301 (430)
T ss_dssp BCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTT--CGGGCCEEEEEBCCCHHHHHHHHHHHH----------------
T ss_pred cCCcccchHHHHHHhhccCCcceEEEEEecccCCC--CCCCCeEEEEEecCCHHHHHHHHHHHh----------------
Confidence 10 0121 2322 344 688999999998 447 699999 6665543322100
Q ss_pred cccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH--
Q 006746 379 DEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD-- 456 (632)
Q Consensus 379 ~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd-- 456 (632)
... ...+ .+.+.+...++. ++|+
T Consensus 302 ---------------~~~--~~~~--------------~~~~~~~~~a~~------------------------~~l~~~ 326 (430)
T 2x5f_A 302 ---------------GLI--RSNI--------------SSGPLPTQSAVK------------------------HVLKNN 326 (430)
T ss_dssp ---------------HHH--HTTT--------------SSCCHHHHHHHH------------------------HHHHSC
T ss_pred ---------------hhh--hccc--------------CCCChHHHHHHH------------------------HHHccC
Confidence 000 0000 011122222222 4554
Q ss_pred --HHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHH-HHHHh
Q 006746 457 --QVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQ-KLADR 533 (632)
Q Consensus 457 --~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~-kla~~ 533 (632)
+.+ .++++.++.+.+.++|.+.|.+.... ..++++.|. .+-.+.+.+.+ ++...+. +|+++
T Consensus 327 ~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-----~g~~~~~~~----~g~~~~~~~~~-----~~~~~~~~~l~~~ 390 (430)
T 2x5f_A 327 KQFDK--EIEQNIQTLKERYEVTKEVVYADQYH-----SHWQAYDFN----SGYFMAIKVHD-----VDPEALRKHLIDK 390 (430)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHTCGGGT-----TTEEECCCC----BSSEEEEEESS-----SCHHHHHHHHHHH
T ss_pred hHHHH--HHHHHHHHHHHHHHHHHHHHHhhCCC-----CCceeeCCC----ceEEEEeCCCC-----CCHHHHHHHHHHh
Confidence 222 24668888889999999999743100 126665542 23346677753 4555554 45554
Q ss_pred CCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 534 ENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 534 ~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+||.++.| ..+.||+|+++ ++.+||+++++.|+++++.
T Consensus 391 ~gi~v~~g----------------------------------------~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 391 YSIGVIAL----------------------------------------NATDIRIAFSC-VEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp HCEECEEC----------------------------------------SSSEEEEEGGG-SCGGGHHHHHHHHHHHHHH
T ss_pred CCEEEecC----------------------------------------CCCeEEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 89998754 12589999996 5999999999999988753
No 145
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.82 E-value=1.2e-18 Score=189.01 Aligned_cols=345 Identities=9% Similarity=0.034 Sum_probs=220.3
Q ss_pred CCceEeecCCCC------CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIG------LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~g------l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|||+++.. +.++.+++++.+.+.... .++.+. | ......+.+++++
T Consensus 41 ~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~-------------------~~~~~~--~---~~~~~~~l~~~la 96 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS-------------------HVMFGG--I---THAPAIELCRKLV 96 (429)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCS-------------------CCCCSS--E---ECHHHHHHHHHHH
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc-------------------cccccc--c---CCHHHHHHHHHHH
Confidence 467899986543 357888888765442110 000000 1 1234567888999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-C----CCCeEEEec-cccchhhHHHHHHHH-----hc-----CCEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-M----SVKNLLTVY-DYESEAVEAMIRTSE-----KR-----GARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-~----~gd~ilt~~-d~~s~~v~~~~~~a~-----~~-----G~~v~ 243 (632)
++++++++ .|+||+|+|+|+++++..+. + + +|++|++.. .||.....++. ... +. ...+.
T Consensus 97 ~~~~~~~~--~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 173 (429)
T 1s0a_A 97 AMTPQPLE--CVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMS-VCDPDNSMHSLWKGYLPENL 173 (429)
T ss_dssp HHSCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHT-TSCTTTTTGGGGTTTSCCCE
T ss_pred HhCCCCCC--EEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhh-hcCCchhhcccccCCCCCce
Confidence 99998765 79999999999999987642 1 1 488877544 56653232221 100 01 11355
Q ss_pred EEeccC-----CccccCHHHHHHHHHhcCcCCCceeEEEEecc-CCCCccccc----hH-HHHHHhhCCcEEEEecccc-
Q 006746 244 SAEFSW-----PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLH-SRMTGARYP----YL-WMRIAQENDWHILIDACAL- 311 (632)
Q Consensus 244 ~v~~~~-----~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~-sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~- 311 (632)
.++++. ..+.+|+++|+++|++.. .++++|++..+ +|.||.+.| ++ |.++|+++|+++++|.+|.
T Consensus 174 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 250 (429)
T 1s0a_A 174 FAPAPQSRMDGEWDERDMVGFARLMAAHR---HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATG 250 (429)
T ss_dssp EECCCCSBC-CCCCGGGGHHHHHHHHHHT---TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred EeCCCcccccccchHHHHHHHHHHHHhCC---CCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhC
Confidence 566531 113478999999997421 24688999888 999999988 99 9999999999999999987
Q ss_pred CCCC--CCCCCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 312 GPKD--MDSFGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 312 ~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
++.. +..++.....+|++++| |.+|. + .++|+++++++.++.+.....+ . +.
T Consensus 251 ~g~~g~~~~~~~~~~~~d~~t~s--K~l~~-G~~~iG~~~~~~~~~~~l~~~~~~-~---------~~------------ 305 (429)
T 1s0a_A 251 FGRTGKLFACEHAEIAPDILCLG--KALTG-GTMTLSATLTTREVAETISNGEAG-C---------FM------------ 305 (429)
T ss_dssp TTTTSSSSGGGGGTCCCSEEEEC--GGGGT-SSSCCEEEEECHHHHHHHHTSTTS-S---------CS------------
T ss_pred CcccchHHHhhhcCCCCCEEEec--ccccC-CCccceEEEeCHHHHHHhhcCCCc-c---------cc------------
Confidence 4321 11233223468988766 97773 5 6799999998776555331000 0 00
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
..+| + +.|.+.+.+.. ++|+.+.+ +.+.+
T Consensus 306 ----------~~~t--~------------~~n~~~~~a~~------------------------aal~~~~~---~~~~~ 334 (429)
T 1s0a_A 306 ----------HGPT--F------------MGNPLACAAAN------------------------ASLAILES---GDWQQ 334 (429)
T ss_dssp ----------CCCT--T------------TTCHHHHHHHH------------------------HHHHHHHT---CHHHH
T ss_pred ----------cCCC--C------------CCCHHHHHHHH------------------------HHHHHHHh---CCHHH
Confidence 0011 0 01222233332 67777655 25678
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHH
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWF 548 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~ 548 (632)
|++.+.++|++.|.++.. .|.+..+. ..+.++.+.+.+. ++...+.+.+.++||.++.+
T Consensus 335 ~~~~~~~~l~~~L~~l~~-----~~~~~~~~-----~~g~~~~~~~~~~----~~~~~l~~~l~~~Gi~v~~~------- 393 (429)
T 1s0a_A 335 QVADIEVQLREQLAPARD-----AEMVADVR-----VLGAIGVVETTHP----VNMAALQKFFVEQGVWIRPF------- 393 (429)
T ss_dssp HHHHHHHHHHHHHGGGGG-----CTTEEEEE-----EETTEEEEEESSC----BCHHHHHHHHHHTTEECCCB-------
T ss_pred HHHHHHHHHHHHHHHHhc-----CCCEEEEE-----EeeEEEEEEECCc----ccHHHHHHHHHHCCCEEecc-------
Confidence 899999999999988721 24454221 1366777777541 45666665555789887521
Q ss_pred HhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 549 SDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+.||+|+++.+|.+||+++++.|+++++.
T Consensus 394 ----------------------------------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 394 ----------------------------------GKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp ----------------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred ----------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 158999999999999999999999998753
No 146
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.82 E-value=1.2e-18 Score=191.23 Aligned_cols=302 Identities=13% Similarity=0.132 Sum_probs=202.8
Q ss_pred HHHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 173 SAMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
.+.|+.|++++ |++ +...|++|+|+|+|+.+++.++ .++||+|++. ..|++ ....++..|++++.++.
T Consensus 121 ~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l-~~~Gd~Vlv~~p~y~~-----~~~~~~~~g~~~~~v~~ 193 (448)
T 3aow_A 121 TPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVF-LNPGDIVVVEAPTYLA-----ALQAFNFYEPQYIQIPL 193 (448)
T ss_dssp HHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCHH-----HHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHH-cCCCCEEEEeCCChHH-----HHHHHHHcCCEEEEecc
Confidence 46788888888 984 3337999999999999999998 6889997754 45553 23445678999999998
Q ss_pred cCCccccCHHHHHHHHH----hcCcCCCceeEE-EEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccCCC----
Q 006746 248 SWPRLRINSEKLRKMVV----SKGKKKKQRGLF-VFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALGPK---- 314 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~----~~~~~~~~~~Lv-~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~g~---- 314 (632)
+ +++ +++++|+++|+ +. ++++++ +++..+|+||..+|. + |+++|+++|+++++|.++....
T Consensus 194 ~-~~g-~d~~~L~~~l~~~~~~~----~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~ 267 (448)
T 3aow_A 194 D-DEG-MKVEILEEKLKELKSQG----KKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGN 267 (448)
T ss_dssp E-TTE-ECHHHHHHHHHHHHHTT----CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSC
T ss_pred C-CCC-CCHHHHHHHHhhhhccC----CCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC
Confidence 7 344 89999999997 31 135776 679999999999985 4 7889999999999999876531
Q ss_pred CCCCC-CCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 315 DMDSF-GLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 315 ~m~~l-dls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
...++ .+...+.++++.|+.|++| | | +|++++++++++.+..... .+
T Consensus 268 ~~~~~~~~~~~~~vi~~~S~SK~~~--~-GlriG~v~~~~~l~~~l~~~~~------------~~--------------- 317 (448)
T 3aow_A 268 PEKKIKALDNEGRVIYLGTFSKILA--P-GFRIGWMVGDPGIIRKMEIAKQ------------ST--------------- 317 (448)
T ss_dssp CCCCTGGGCTTSCEEEEEESTTTTC--G-GGCCEEEEECHHHHHHHHHHHH------------HH---------------
T ss_pred CCcCHHhcCCCCCEEEEccchhhcc--c-cccEEEEEeCHHHHHHHHHHHH------------Hh---------------
Confidence 00111 2223456899999999999 4 6 7999998776554432100 00
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHH-hhCHHHHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD-SLGLTMISRRG 470 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~-~~Gl~~I~~r~ 470 (632)
..++ +.+...++. ++|+... ...++.+.++.
T Consensus 318 -------~~~~-----------------~~~~q~a~~------------------------~~L~~~~~~~~~~~~~~~~ 349 (448)
T 3aow_A 318 -------DLCT-----------------NVFGQVVAW------------------------RYVDGGYLEKHIPEIRKFY 349 (448)
T ss_dssp -------HSSC-----------------CHHHHHHHH------------------------HHHHTTHHHHHHHHHHHHH
T ss_pred -------cCCC-----------------CHHHHHHHH------------------------HHHHhCCHHHHHHHHHHHH
Confidence 0000 000011111 2332210 01256677778
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHH
Q 006746 471 RCLINWLVNALMKLQHPNTEGNA-LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFS 549 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p-~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~ 549 (632)
+...++|.+.|.+. .| .++++.|. .|..+.+.+.+ + ++...+.+.+.++||.++.|..|...
T Consensus 350 ~~~~~~l~~~L~~~-------~~~g~~~~~p~----~g~~~~v~~~~--~--~~~~~l~~~l~~~gV~v~pg~~f~~~-- 412 (448)
T 3aow_A 350 KPRRDAMLEALEEF-------MPEGVKWTKPE----GGMFIWVTLPD--G--IDSKKMLERAIKKGVAYVPGEAFYAH-- 412 (448)
T ss_dssp HHHHHHHHHHHHHH-------CCTTCEECCCS----BSSEEEEECST--T--CCHHHHHHHHHHTTEECEEGGGGSTT--
T ss_pred HHHHHHHHHHHHHh-------CCCCeEEeCCC----ccEEEEEEcCC--C--CCHHHHHHHHHHCCcEEEcchhhcCC--
Confidence 88889999999874 24 46665552 35566666653 1 45555554444559999877543320
Q ss_pred hHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 550 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 550 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
....+.||+|++.. +.|||+.+++.|+++++..
T Consensus 413 ------------------------------~~~~~~iRls~~~~-~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 413 ------------------------------RDVKNTMRLNFTYV-DEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp ------------------------------CCCCSEEEEECSSS-CTHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCCCEEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 11346899999974 8999999999999988654
No 147
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.82 E-value=3.5e-19 Score=191.31 Aligned_cols=325 Identities=12% Similarity=0.038 Sum_probs=199.5
Q ss_pred HHHHHHHHHH-HHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 170 GLESAMKKRI-MDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 170 ~~~~~~R~~i-a~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
...++.|+++ ++++|.. + .+++|+|+|+|+.+++.++.+++||+|++ ...|++ + ...++..|++++.+++
T Consensus 36 ~~~~~l~~~~~a~~~g~~-~--~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~--~---~~~~~~~G~~~~~v~~ 107 (377)
T 3ju7_A 36 PINQRFEQTIMSGFFQNR-G--AVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPA--T---PLAAIWCGLEPYFIDI 107 (377)
T ss_dssp HHHHHHHHHHHHHTSTTC-S--EEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTH--H---HHHHHHTTCEEEEECB
T ss_pred HHHHHHHHHHHHHHhCCC-C--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHH--H---HHHHHHcCCEEEEEec
Confidence 4567899999 9999932 2 58999999999999999987899999765 456764 2 2345678999999999
Q ss_pred cCCccccCHHHHHHHH-HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCCCCC-
Q 006746 248 SWPRLRINSEKLRKMV-VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLV- 324 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i-~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldls~~- 324 (632)
++.++.+|+++|+++| +++ .++++++ ..|.+|...|++ |.++|+ +|+++++|++|+.|.. .+....
T Consensus 108 ~~~~~~~d~~~l~~~i~~~~----~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~---~~~~~~g 176 (377)
T 3ju7_A 108 SIDDWYMDKTVLWDKIEELK----EEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLM---NGGMHYG 176 (377)
T ss_dssp CTTTCSBCHHHHHHHHHHHG----GGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCE---ETTEETT
T ss_pred CCccCCcCHHHHHHHHhcCC----CCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCe---ECCEecc
Confidence 8667789999999998 443 1247776 346799999999 999999 9999999999988752 111111
Q ss_pred --CCcEEEEcc--ccccCCCCCceEEEEEeCC-CccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 325 --RPDFLICSF--YQIFGENPSGFGCLFVKKS-TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 325 --~~Df~~~S~--hK~~G~~P~G~G~L~Vr~~-~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
..|+.++|+ +|.+| +...|+++.+++ ..+.++.....|... .+.. .+
T Consensus 177 ~~~~d~~~~S~~~~K~l~--~g~gG~~~~~~~~l~~~~~~~~~~g~~~------~~~~--------------------~~ 228 (377)
T 3ju7_A 177 QDFSGMIIYSFHATKPFG--IGEGGLIYSKNEEDIQRIKRMGNFGFDT------NREC--------------------TM 228 (377)
T ss_dssp TTCSSEEEEECBTTSSSC--CBSCEEEEESCHHHHHHHHHHTBTTBCT------TSCB--------------------CS
T ss_pred CCCCcEEEEECCCCCcCC--CCCcEEEEECCHHHHHHHHHHHhcCCCC------CCce--------------------ee
Confidence 246777765 69998 523344444433 233333321112110 0000 00
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 479 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~ 479 (632)
.|.. ..+..+. +++-......++.+.+|.+.+.+++.+
T Consensus 229 ~g~~---------------~~~~~~~---------------------------aa~~~~~l~~l~~~~~~~~~~~~~~~~ 266 (377)
T 3ju7_A 229 MGFN---------------CKMSEYA---------------------------AAIGIATMKKWDDKLKERTRISEWYKQ 266 (377)
T ss_dssp SCCB---------------CCCCHHH---------------------------HHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cccc---------------CCCCHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110 0011111 222222223567888899999999999
Q ss_pred HHHccCCCCCCCCCcEEE-ECCCCCCCCCc-EEEEEEccCCCCccCHHHHHHHHHhCCcEEccCc--cCChHHHhHHHHh
Q 006746 480 ALMKLQHPNTEGNALVKI-YGPKIRFDRGP-ALAFNVFDWKREKIEPVLVQKLADRENISLSYGS--LHHIWFSDKYQKE 555 (632)
Q Consensus 480 ~L~~l~h~~~~G~p~v~I-ygp~~~~~rg~-ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~--~c~~~~~~~~~~~ 555 (632)
.|.++. .+++ +.+........ .+.+.+.+ + .+.+.+.+.+.++||.++.++ .|+.......
T Consensus 267 ~L~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~--- 331 (377)
T 3ju7_A 267 LLQSNG--------LMKKGWQLQKTEAVIQQFMPILCPE--E--VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRN--- 331 (377)
T ss_dssp HHHHTT--------TTTTTCBCCCCSCBCCSSEEEECCT--T--SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTT---
T ss_pred HhcCCC--------CccccccCCCCCcceEEEEEEEeCC--h--hhHHHHHHHHHHCCCceecccCCccccchhhhc---
Confidence 998872 1100 11211111111 23343332 1 357788888888999999886 4554211100
Q ss_pred hhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 556 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
... ..|. + ........||++++...|.+||+++++.|++++..
T Consensus 332 --~~~---~~~p-----~----~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 332 --YKS---TDLT-----R----TNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp --SCB---SCCH-----H----HHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred --CCC---CCCH-----H----HHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 000 0000 0 00112369999999999999999999999887643
No 148
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.81 E-value=2.2e-19 Score=192.95 Aligned_cols=342 Identities=9% Similarity=-0.041 Sum_probs=219.1
Q ss_pred CCceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcC-
Q 006746 107 SNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLN- 184 (632)
Q Consensus 107 ~~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~- 184 (632)
.+.++|+.+... +.|+.+++++.+.+.... ...|+.. .-..+.|+.++++++
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~------------------------~~~y~~~--~g~~~l~~~la~~~~~ 76 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDN------------------------MNQYTRG--FGHPALVKALSCLYGK 76 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGG------------------------GGSCCCT--TCCHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCcc------------------------ccCCCCC--CChHHHHHHHHHHHHH
Confidence 457899988766 357778887765432100 0001110 001356777777766
Q ss_pred -----CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC---------
Q 006746 185 -----ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW--------- 249 (632)
Q Consensus 185 -----a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~--------- 249 (632)
++++ ..|+||+|+|+|+.+++.++ .++||+|++. ..|++ + ...++..|++++.++++.
T Consensus 77 ~~~~~~~~~-~~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~--~---~~~~~~~g~~~~~~~~~~~~~~g~~~~ 149 (410)
T 3e2y_A 77 IYQRQIDPN-EEILVAVGAYGSLFNSIQGL-VDPGDEVIIMVPFYDC--Y---EPMVRMAGAVPVFIPLRSKPTDGMKWT 149 (410)
T ss_dssp HHTSCCCTT-TSEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--H---HHHHHHTTCEEEEEECEECCCCSSCCB
T ss_pred HhCCCCCCC-CCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh--h---HHHHHHcCCEEEEEecccccccccccc
Confidence 5541 27999999999999999998 7889997654 45553 2 234567899999998862
Q ss_pred -CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc---chH-HHHHHhhCCcEEEEeccccC----CCCCCCCC
Q 006746 250 -PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY---PYL-WMRIAQENDWHILIDACALG----PKDMDSFG 320 (632)
Q Consensus 250 -~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~---pl~-i~~~a~~~g~~vlvDaaq~~----g~~m~~ld 320 (632)
.++.+++++|++++++ ++++++++..+|+||..+ +++ |+++|+++|+++++|.++.. +. ....
T Consensus 150 ~~~~~~d~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~ 221 (410)
T 3e2y_A 150 SSDWTFDPRELESKFSS------KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH--THVK 221 (410)
T ss_dssp GGGEECCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCC
T ss_pred ccCCcCCHHHHHhhcCC------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC--CCCC
Confidence 2445799999887754 358999999999999996 577 88899999999999999864 22 1112
Q ss_pred CC----CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 321 LS----LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 321 ls----~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
+. ..+.++++.|++|.+|.+..++|+++.+++.++.+......
T Consensus 222 ~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--------------------------------- 268 (410)
T 3e2y_A 222 IATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQN--------------------------------- 268 (410)
T ss_dssp GGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHT---------------------------------
T ss_pred HHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHh---------------------------------
Confidence 21 23446999999999983222378888877665443221000
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHH------HhhCHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQV------DSLGLTMISRRG 470 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~------~~~Gl~~I~~r~ 470 (632)
++ + +.+.+...++. .+|+.. ....++.+.++.
T Consensus 269 ----~~--~------------~~~~~~~~a~~------------------------~~l~~~~~~~~~~~~~~~~~~~~~ 306 (410)
T 3e2y_A 269 ----SF--Y------------TCATPLQAALA------------------------EAFWIDIKRMDDPECYFNSLPKEL 306 (410)
T ss_dssp ----TT--C------------CCCHHHHHHHH------------------------HHHHHHHTTTTSTTSHHHHHHHHH
T ss_pred ----hc--c------------CCChHHHHHHH------------------------HHHHhhhccccchHHHHHHHHHHH
Confidence 00 0 00111111111 333320 012367888889
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccC---------HHHHHHHHHhCCcEEccC
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIE---------PVLVQKLADRENISLSYG 541 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~---------~~~V~kla~~~gI~lr~G 541 (632)
+.+.++|.+.|.++ | ++++.|. .+..+.+.+..... .++ .+.++++++++||.+..|
T Consensus 307 ~~~~~~l~~~L~~~------g---~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 372 (410)
T 3e2y_A 307 EVKRDRMVRLLNSV------G---LKPIVPD----GGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPV 372 (410)
T ss_dssp HHHHHHHHHHHHTT------T---CEEEBCS----BSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEG
T ss_pred HHHHHHHHHHHHHC------C---CeecCCC----ccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCc
Confidence 99999999999887 4 4555552 34455555543111 122 266677888899999988
Q ss_pred ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 542 SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 542 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
..|...... ..+.+.||+|++. +.|||+++++.|++|
T Consensus 373 ~~f~~~~~~-----------------------------~~~~~~iRis~~~--~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 373 SAFCDSKSK-----------------------------PHFEKLVRFCFIK--KDSTLDAAEEIFRAW 409 (410)
T ss_dssp GGGSCTTTH-----------------------------HHHTTEEEEECCC--CHHHHHHHHHHHHTC
T ss_pred hhhCCCCCC-----------------------------CCCCCEEEEEEcC--CHHHHHHHHHHHHhc
Confidence 666431100 0134799999876 999999999998764
No 149
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.81 E-value=8.9e-19 Score=190.52 Aligned_cols=304 Identities=15% Similarity=0.132 Sum_probs=199.0
Q ss_pred HHHHHHHHHHcC--------CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHH-hcCCEE
Q 006746 173 SAMKKRIMDFLN--------ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSE-KRGARV 242 (632)
Q Consensus 173 ~~~R~~ia~~l~--------a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~-~~G~~v 242 (632)
.+.|++|+++++ ++++ .|+||+|+|+|+.+++.++ .++||+|++. ..|++ .. ..++ ..|+++
T Consensus 89 ~~l~~~la~~~~~~~~~~~~~~~~--~v~~~~gg~~a~~~~~~~l-~~~gd~vl~~~p~~~~-~~----~~~~~~~g~~~ 160 (435)
T 3piu_A 89 PAFKKAMVDFMAEIRGNKVTFDPN--HLVLTAGATSANETFIFCL-ADPGEAVLIPTPYYPG-FD----RDLKWRTGVEI 160 (435)
T ss_dssp HHHHHHHHHHHHHHTTTSSCCCGG--GEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-HH----HHTTTTTCCEE
T ss_pred HHHHHHHHHHHHHhhCCCCCCCHH--HEEEcCChHHHHHHHHHHh-cCCCCeEEECCCcccc-HH----HHHHHhcCCEE
Confidence 478888888887 5554 7999999999999999998 6889997754 45654 22 2233 579999
Q ss_pred EEEeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEeccccC----C
Q 006746 243 MSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACALG----P 313 (632)
Q Consensus 243 ~~v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~~----g 313 (632)
+.++.+.. ...+|+++|+++|.+......++++++++..+|+||..+|. + |+++|+++|+++++|.++.. +
T Consensus 161 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~ 240 (435)
T 3piu_A 161 VPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240 (435)
T ss_dssp EEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS
T ss_pred EEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC
Confidence 99998732 23479999999997632112357899999999999999987 4 67789999999999999865 2
Q ss_pred CCCCCCCCC----C---------CCCcEEEEccccccCCCCCceEEEEEeCC-CccccCCCCCCCceeeccccccccccc
Q 006746 314 KDMDSFGLS----L---------VRPDFLICSFYQIFGENPSGFGCLFVKKS-TVPILVDNTSSGMVSLLPAKKQLWLTD 379 (632)
Q Consensus 314 ~~m~~ldls----~---------~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~-~~~~L~~~~~gG~v~~~~~~~~~~~~~ 379 (632)
.. ...+. + .+.++++.|++|.||.+...+|+++++++ ..+.++.. ..++
T Consensus 241 ~~--~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~------------~~~~--- 303 (435)
T 3piu_A 241 PS--FISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM------------SSFG--- 303 (435)
T ss_dssp SC--CCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHH------------GGGS---
T ss_pred CC--CcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHH------------hhcC---
Confidence 21 11111 1 12238999999999842223799888543 32222110 0000
Q ss_pred ccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH---
Q 006746 380 EFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD--- 456 (632)
Q Consensus 380 ~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd--- 456 (632)
+ .+.+....+. ..|+
T Consensus 304 ----------------------~----------------~~~~~~~~~~------------------------~~l~~~~ 321 (435)
T 3piu_A 304 ----------------------L----------------VSSQTQHLLS------------------------AMLSDKK 321 (435)
T ss_dssp ----------------------C----------------CCHHHHHHHH------------------------HHHHCHH
T ss_pred ----------------------C----------------CCHHHHHHHH------------------------HHhcChH
Confidence 0 0000001111 2222
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc---cCHHHHHHHHHh
Q 006746 457 QVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK---IEPVLVQKLADR 533 (632)
Q Consensus 457 ~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~---i~~~~V~kla~~ 533 (632)
++.+ .++...++.+...++|.+.|.++ | ++++.+ ..+.++.+.+.+..... -..+.+++++++
T Consensus 322 ~~~~-~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~----~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 387 (435)
T 3piu_A 322 LTKN-YIAENHKRLKQRQKKLVSGLQKS------G---ISCLNG----NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYE 387 (435)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHTT------T---CEECCC----CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHT
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHhc------C---CcccCC----CeeEEEEEEcccccccCCchhHHHHHHHHHHH
Confidence 1111 34667788888899999999876 4 445443 23456767765421000 012455667777
Q ss_pred CCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 534 ENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 534 ~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+||.++.|..|.+ .+.++||++++.. +.+||+++++.|+++++.
T Consensus 388 ~gi~v~~g~~~~~----------------------------------~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 388 VHLNISPGSSCHC----------------------------------TEPGWFRVCFANL-PERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp SCEECEEGGGGTC----------------------------------SSTTEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeCCcccCC----------------------------------CCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHH
Confidence 7999987754332 1346999999877 999999999999998764
No 150
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.81 E-value=2e-18 Score=185.07 Aligned_cols=325 Identities=11% Similarity=0.069 Sum_probs=210.0
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|+|.++. |+.++.+++++.+.+... .+.... | ..+..++.+++++
T Consensus 38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~--------------------~~~~~~--~---~~~~~~~l~~~la 92 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKL--------------------IHCSNL--F---WNRPQMELAELLS 92 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHC--------------------SCCCTT--S---EEHHHHHHHHHHH
T ss_pred CCCEEEECCccccccccCCCCHHHHHHHHHHHHhc--------------------ccCccc--c---CCHHHHHHHHHHH
Confidence 45789998654 455788888876543211 010000 1 2356778999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-----CC-CCeEE-EeccccchhhHHHHHHHHhcCCE------------
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF-----MS-VKNLL-TVYDYESEAVEAMIRTSEKRGAR------------ 241 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~-----~~-gd~il-t~~d~~s~~v~~~~~~a~~~G~~------------ 241 (632)
+++|. + .|+||+|+|+|+.+++..+.. .+ +++|+ ....||+....++ +..|.+
T Consensus 93 ~~~g~--~--~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~----~~~g~~~~~~~~~p~~~~ 164 (397)
T 2ord_A 93 KNTFG--G--KVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSL----TATGQPKYQKPFEPLVPG 164 (397)
T ss_dssp HTTTS--C--EEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHH----HHSBCHHHHGGGCSCCTT
T ss_pred HhcCC--C--eEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhh----hccCChhhccccCCCCCC
Confidence 99984 3 699999999999999887621 04 45665 4456765333232 233443
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcc----ccchH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA----RYPYL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~----~~pl~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
+..++. .|+++|++++++ ++++|++.+.+|+||. ..+++ |.++|+++|+++++|.++.. +..
T Consensus 165 ~~~~~~------~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~ 232 (397)
T 2ord_A 165 FEYFEF------NNVEDLRRKMSE------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRT 232 (397)
T ss_dssp EEEECT------TCHHHHHHHCCT------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred eeEecC------CCHHHHHHHhhc------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccC
Confidence 656654 278899888864 3589999999999999 35677 88999999999999999862 211
Q ss_pred CCCCCCCCC--CCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 316 MDSFGLSLV--RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 316 m~~ldls~~--~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
-..+.+..+ .+|++ ++.|.+|. +.++|+++++++.+ .+.+...++ .|
T Consensus 233 g~~~~~~~~~~~~d~~--s~sK~~~~-G~r~G~~~~~~~~~-~l~~~~~~~----------~~----------------- 281 (397)
T 2ord_A 233 GKLFAYQKYGVVPDVL--TTAKGLGG-GVPIGAVIVNERAN-VLEPGDHGT----------TF----------------- 281 (397)
T ss_dssp SSSSHHHHHTCCCSEE--EECGGGGT-TSCCEEEEECSTTC-CCCTTSSCC----------SS-----------------
T ss_pred ccchhhhhhCCCCCee--eeccccCC-CcCeEEEEEchHhc-ccCCCCcCC----------CC-----------------
Confidence 002222222 37976 56798883 45699999998865 553311100 00
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
. .+.+...++. ++|+.+.+ +.+.++.+.+
T Consensus 282 ------------~------------~~~~~~~a~~------------------------~~l~~~~~---~~~~~~~~~~ 310 (397)
T 2ord_A 282 ------------G------------GNPLACRAGV------------------------TVIKELTK---EGFLEEVEEK 310 (397)
T ss_dssp ------------T------------TCHHHHHHHH------------------------HHHHHHTS---TTHHHHHHHH
T ss_pred ------------C------------CCHHHHHHHH------------------------HHHHHHHh---CCHHHHHHHH
Confidence 0 0111112221 56665543 4677888889
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 553 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~ 553 (632)
.++|.+.|.++.. +.+.+... ...+.++.|.+.+. .+...+.+.+.++||.++.|
T Consensus 311 ~~~l~~~L~~~~~----~~~~~~~~-----~~~g~~~~~~~~~~----~~~~~l~~~l~~~gi~v~~~------------ 365 (397)
T 2ord_A 311 GNYLMKKLQEMKE----EYDVVADV-----RGMGLMIGIQFREE----VSNREVATKCFENKLLVVPA------------ 365 (397)
T ss_dssp HHHHHHHHHHHHH----HCTTEEEE-----EEETTEEEEEECTT----SCHHHHHHHHHHTTEECEEE------------
T ss_pred HHHHHHHHHHHHH----hCCceEEE-----EEEeEEEEEEECCh----HHHHHHHHHHHHCCCEEccC------------
Confidence 9999999887610 12333221 12477888887642 24555555555589988643
Q ss_pred HhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 554 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 554 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+.+.||+|+++.++.+|++++++.|+++++
T Consensus 366 ----------------------------~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 366 ----------------------------GNNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp ----------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 135899999999999999999999998875
No 151
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.81 E-value=1.3e-18 Score=182.49 Aligned_cols=306 Identities=12% Similarity=0.109 Sum_probs=206.7
Q ss_pred CceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcC--
Q 006746 108 NHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLN-- 184 (632)
Q Consensus 108 ~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~-- 184 (632)
+.+|||++... ..|+.+++++.+.+.... ...|+.. . ..+.|+.|+++++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~------------------------~~~y~~~--~-~~~lr~~la~~~~~~ 72 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDA------------------------LRIYYDS--P-DEELIEKILSYLDTD 72 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGG------------------------GGSCCCS--S-CHHHHHHHHHHHTCS
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhh------------------------hhcCCCC--c-hHHHHHHHHHHcCCC
Confidence 57899998875 368889998876542100 0011110 1 3589999999999
Q ss_pred -CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHH
Q 006746 185 -ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 185 -a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
++++ .|+||+|+|+|+.+++.++ ||+|++...|++ ....++..|++++.++.+ +++.+++++|
T Consensus 73 ~~~~~--~v~~~~G~~~al~~~~~~~----gd~Vl~~p~y~~-----~~~~~~~~g~~~~~v~~~-~~~~~d~~~l---- 136 (335)
T 1uu1_A 73 FLSKN--NVSVGNGADEIIYVMMLMF----DRSVFFPPTYSC-----YRIFAKAVGAKFLEVPLT-KDLRIPEVNV---- 136 (335)
T ss_dssp SCCGG--GEEEESSHHHHHHHHHHHS----SEEEECSSSCHH-----HHHHHHHHTCEEEECCCC-TTSCCCCCCC----
T ss_pred CCCHH--HEEEcCChHHHHHHHHHHh----CCcEEECCCcHH-----HHHHHHHcCCeEEEeccC-CCCCCCHHHc----
Confidence 7765 7999999999999999998 888775533432 234567789999998886 4445666665
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccC-CCCCCCCC-CCCCCCcEEEEccccccCCC
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALG-PKDMDSFG-LSLVRPDFLICSFYQIFGEN 340 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~-g~~m~~ld-ls~~~~Df~~~S~hK~~G~~ 340 (632)
+ +++++++++.+|+||..+|.+ +.++++..| ++++|.++.. ... ..++ +...+.++++.|++|++|
T Consensus 137 -~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g-- 205 (335)
T 1uu1_A 137 -G------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFS-- 205 (335)
T ss_dssp -C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTT--
T ss_pred -C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcC--
Confidence 2 248999899999999999999 999998888 8999999863 111 1122 234567899999999999
Q ss_pred CCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCC
Q 006746 341 PSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGK 418 (632)
Q Consensus 341 P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt 418 (632)
+.| +|+++++++.++.+.+... .| +
T Consensus 206 ~~G~r~G~~~~~~~~~~~l~~~~~------------~~-----------------------------------------~ 232 (335)
T 1uu1_A 206 LAAQRVGYVVASEKFIDAYNRVRL------------PF-----------------------------------------N 232 (335)
T ss_dssp CGGGCCEEEEECHHHHHHHHHHSC------------TT-----------------------------------------C
T ss_pred CcccCeEEEEeCHHHHHHHHHhcC------------CC-----------------------------------------C
Confidence 447 6999998766554432100 00 0
Q ss_pred cccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEE
Q 006746 419 LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY 498 (632)
Q Consensus 419 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iy 498 (632)
.+.+...++. ++|+.. ..++.+.++.+.+.+++.+.|.++ |. +++
T Consensus 233 ~~~~~~~~~~------------------------~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~------g~---~~~ 277 (335)
T 1uu1_A 233 VSYVSQMFAK------------------------VALDHR--EIFEERTKFIVEERERMKSALREM------GY---RIT 277 (335)
T ss_dssp SCHHHHHHHH------------------------HHHHTH--HHHHHHHHHHHHHHHHHHHHHHHH------TC---CBC
T ss_pred cCHHHHHHHH------------------------HHhCCH--HHHHHHHHHHHHHHHHHHHHHHHC------Cc---EEc
Confidence 0111112221 444432 136778888999999999999887 32 233
Q ss_pred CCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccccc
Q 006746 499 GPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 578 (632)
Q Consensus 499 gp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 578 (632)
| ..+..+.+.+.+ .+...+.+.+.++||.++.
T Consensus 278 -~----~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~-------------------------------------- 309 (335)
T 1uu1_A 278 -D----SRGNFVFVFMEK-----EEKERLLEHLRTKNVAVRS-------------------------------------- 309 (335)
T ss_dssp -C----CCSSEEEEECCT-----HHHHHHHHHHHHHTEEEEE--------------------------------------
T ss_pred -C----CCCeEEEEECCC-----CCHHHHHHHHHHCCEEEEE--------------------------------------
Confidence 2 235667666543 3444555544567998863
Q ss_pred CCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 579 ANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 579 ~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
..+.||+|++ +.+|++++++.|+++
T Consensus 310 ---~~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 310 ---FREGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp ---ETTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred ---CCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 1248999985 579999999998764
No 152
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.80 E-value=5.1e-18 Score=178.67 Aligned_cols=280 Identities=11% Similarity=0.075 Sum_probs=190.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec-cCC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF-SWP 250 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~-~~~ 250 (632)
.+.|+.+++++|++++ .|+||+|+|+|+.+++.++. ||+|++. ..|++ ....++..|++++.++. + +
T Consensus 53 ~~lr~~la~~~~~~~~--~i~~t~g~~~al~~~~~~l~---gd~Vi~~~p~~~~-----~~~~~~~~g~~~~~v~~~~-~ 121 (350)
T 3fkd_A 53 GTLRQMLAKRNSVDNN--AILVTNGPTAAFYQIAQAFR---GSRSLIAIPSFAE-----YEDACRMYEHEVCFYPSNE-D 121 (350)
T ss_dssp HHHHHHHHHHTTCCGG--GEEEESHHHHHHHHHHHHTT---TCEEEEEESCCHH-----HHHHHHHTTCEEEEEETTS-C
T ss_pred HHHHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHHC---CCEEEEeCCCcHH-----HHHHHHHcCCeEEEEecCC-c
Confidence 4789999999999865 79999999999999999985 8997654 44543 23556778999999998 5 3
Q ss_pred ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCC-cEEEEeccccCCC-C--CCCCCCCCCC
Q 006746 251 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEND-WHILIDACALGPK-D--MDSFGLSLVR 325 (632)
Q Consensus 251 ~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g-~~vlvDaaq~~g~-~--m~~ldls~~~ 325 (632)
...+++ + +++++++++.+|+||..+|++ +.++++..+ .++++|.++.... + .....+...+
T Consensus 122 ~~~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~ 187 (350)
T 3fkd_A 122 IGEADF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRK 187 (350)
T ss_dssp GGGSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCS
T ss_pred cccCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCC
Confidence 233332 2 358999999999999999999 988888765 6999999876421 0 0112333456
Q ss_pred CcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCC
Q 006746 326 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 405 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f 405 (632)
.++++.|++|.+|.+..++|+++++++.++.+..... .|.
T Consensus 188 ~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~------------~~~---------------------------- 227 (350)
T 3fkd_A 188 NLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFST------------PWA---------------------------- 227 (350)
T ss_dssp SEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCC------------TTC----------------------------
T ss_pred CEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCC------------CCC----------------------------
Confidence 6799999999988422347998887666554432110 000
Q ss_pred CccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHc
Q 006746 406 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG--LTMISRRGRCLINWLVNALMK 483 (632)
Q Consensus 406 ~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G--l~~I~~r~~~L~~~L~~~L~~ 483 (632)
.+.+... .++..+...+ ++.+.++. .+.+++.+.|.+
T Consensus 228 -------------~~~~~~~---------------------------~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~ 266 (350)
T 3fkd_A 228 -------------VNALAIE---------------------------AAKFILIHPAQFTLPIRKWQ-RNTVDFITALNR 266 (350)
T ss_dssp -------------SCHHHHH---------------------------HHHHHHHCTTTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred -------------CCHHHHH---------------------------HHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 0000111 2222233322 23444444 778888888887
Q ss_pred cCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHH-HHHhCCcEEccCccCChHHHhHHHHhhhhhhhh
Q 006746 484 LQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQK-LADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 562 (632)
Q Consensus 484 l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~k-la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~ 562 (632)
+ |.++++.+ .+..+.+.+.+. +...+.+ |++++||.++.|..|..
T Consensus 267 ~--------~~~~~~~~-----~~~~~~~~~~~~-----~~~~l~~~L~~~~gi~v~~g~~f~~---------------- 312 (350)
T 3fkd_A 267 L--------DGVEVHPS-----GTTFFLLRLKKG-----TAAELKKYMLEEYNMLIRDASNFRG---------------- 312 (350)
T ss_dssp S--------TTEEECCC-----SSSEEEEEESSS-----CHHHHHHHHHHTTCEECEECTTSTT----------------
T ss_pred C--------CCcEECCC-----CCcEEEEECCCC-----CHHHHHHHHHHHCCEEEEeCccCCC----------------
Confidence 6 66777533 466776777652 4555554 55449999998865531
Q ss_pred hhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 563 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
.+.+.||+|++ +.+|+++|+++|++++...
T Consensus 313 ------------------~~~~~iRis~~---~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 313 ------------------LDESYVRITTQ---RPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp ------------------CCTTEEEEECC---CHHHHHHHHHHHHHHHTC-
T ss_pred ------------------CCCCEEEEEcC---CHHHHHHHHHHHHHHHHHh
Confidence 13469999976 8999999999999987664
No 153
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.80 E-value=4.2e-19 Score=193.31 Aligned_cols=315 Identities=13% Similarity=0.071 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC--------------eEEE--eccccchhhH
Q 006746 172 ESAMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVK--------------NLLT--VYDYESEAVE 229 (632)
Q Consensus 172 ~~~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd--------------~ilt--~~d~~s~~v~ 229 (632)
+.+.|+.|++++ +++++ .|+||+|+|+|+++++.++ .++|| +|++ ...|+. ...
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~--~i~~t~G~t~al~~~~~~l-~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~-~~~ 160 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSE--NIALTNGSQNAFFYLFNLF-GGAFVNEHSQDKESKSVDKSILLPLTPEYIG-YSD 160 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGG--GEEEESSHHHHHHHHHHHS-SEEEECC-------CEEEEEEEESSSSCCGG-GTT
T ss_pred CHHHHHHHHHHHHhhcCCCCCHH--HEEEecCcHHHHHHHHHHH-hCCCccccccccccccccceEEEeCCCCccc-hhh
Confidence 357888888887 56655 7999999999999999998 67777 6654 234443 111
Q ss_pred HH--HHHHHhcCCEEEEEeccCCcc----ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhh
Q 006746 230 AM--IRTSEKRGARVMSAEFSWPRL----RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQE 299 (632)
Q Consensus 230 ~~--~~~a~~~G~~v~~v~~~~~~~----~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~ 299 (632)
.+ .......|..+..++++..++ .+|+++|++++..-+ ++++++++++.+|+||..+| ++ |+++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~ 237 (444)
T 3if2_A 161 VHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKR 237 (444)
T ss_dssp CCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred cccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 00 001245688888888763232 689999998743211 24689999999999999999 77 8888999
Q ss_pred CCcEEEEeccccCCCC---CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccc
Q 006746 300 NDWHILIDACALGPKD---MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLW 376 (632)
Q Consensus 300 ~g~~vlvDaaq~~g~~---m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~ 376 (632)
+|+++++|.++..+.. ...+.....+.++++.|++|+ +.+..++|+++.++++++.+..... .
T Consensus 238 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~------------~- 303 (444)
T 3if2_A 238 YDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNA------------V- 303 (444)
T ss_dssp TTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHH------------H-
T ss_pred CCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHH------------h-
Confidence 9999999999874321 012222235678999999996 5322446777766555443321100 0
Q ss_pred cccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH
Q 006746 377 LTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD 456 (632)
Q Consensus 377 ~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd 456 (632)
.....+ ..... .+..
T Consensus 304 ----------------------~~~~~~----------------~~~~~---------------------------a~~~ 318 (444)
T 3if2_A 304 ----------------------VNLAPT----------------RFGAA---------------------------IATP 318 (444)
T ss_dssp ----------------------HHSSCC----------------CHHHH---------------------------HHHH
T ss_pred ----------------------ccCCCC----------------hHHHH---------------------------HHHH
Confidence 000000 00000 1111
Q ss_pred HHHhhCH-----HHHHHHHHHHHHHHHHHHHc-cCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHH
Q 006746 457 QVDSLGL-----TMISRRGRCLINWLVNALMK-LQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKL 530 (632)
Q Consensus 457 ~~~~~Gl-----~~I~~r~~~L~~~L~~~L~~-l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kl 530 (632)
.+....+ +.+.++.+...+.+.+.|.+ +. + -.++++.|. .+..+.+.+.+. .++...+.+.
T Consensus 319 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-----~-~~~~~~~~~----~g~~~~~~~~~~---~~~~~~l~~~ 385 (444)
T 3if2_A 319 LVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALG-----D-YPLMIHKPE----GAIFLWLWFKDL---PISTLDLYER 385 (444)
T ss_dssp HHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSS-----S-SSEEEECCC----BSSEEEEEETTC---SSCHHHHHHH
T ss_pred HHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-----c-CCceEecCC----ccEEEEEEcCCC---CCCHHHHHHH
Confidence 1111111 11334444555555555554 21 0 136676653 456666666531 1567777777
Q ss_pred HHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 531 ADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 531 a~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
+.++||.++.|..|..+..... .....+.||+|++. +.+||+++++.|++++
T Consensus 386 l~~~gi~v~~g~~~~~~~~~~~--------------------------~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~ 437 (444)
T 3if2_A 386 LKAKGTLIVPSEYFFPGVDVSD--------------------------YQHAHECIRMSIAA--DEQTLIDGIKVIGEVV 437 (444)
T ss_dssp HHHTTEECEEGGGSCTTCCCTT--------------------------CSGGGSEEEEESSS--CHHHHHHHHHHHHHHH
T ss_pred HHHCCeEEecchhhcCCCCCcc--------------------------cccCCCeEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 7889999999987765311000 01134699999997 9999999999999987
Q ss_pred hhc
Q 006746 611 DAD 613 (632)
Q Consensus 611 ~~~ 613 (632)
..-
T Consensus 438 ~~~ 440 (444)
T 3if2_A 438 REL 440 (444)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 154
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.80 E-value=2e-18 Score=183.23 Aligned_cols=291 Identities=9% Similarity=0.029 Sum_probs=187.9
Q ss_pred HHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCC--CCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMS--VKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~--gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.+++++ |++.+...|+||+|+|+|+.+++.++ .++ ||+|++. ..|++ ....++..|++++.++
T Consensus 63 ~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~-~~~~~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~~~ 136 (376)
T 3ezs_A 63 SLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFV-LFDYQNPTIAYPNPFYQI-----YEGAAKFIKAKSLLMP 136 (376)
T ss_dssp HHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHH-TTTCSSCEEEEEESCCTH-----HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHH-cCCCCCCEEEEecCCcHh-----HHHHHHHcCCEEEEcc
Confidence 4555555555 87322338999999999999999998 678 8997654 45553 2345677899999999
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCC-CCCCCC
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKD-MDSFGL 321 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~-m~~ldl 321 (632)
.++.. .+++ ++++.+.+++ +++++++.+|+||..+|.+ |+++|+++|+++++|.++..... -....+
T Consensus 137 ~~~~~-~~~~-~l~~~~~~~~------~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 208 (376)
T 3ezs_A 137 LTKEN-DFTP-SLNEKELQEV------DLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSL 208 (376)
T ss_dssp CCGGG-TSCC-CCCHHHHHHC------SEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCH
T ss_pred cCCCC-Ccch-hHHhhhccCC------CEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCH
Confidence 87432 3444 6666676543 7899999999999999954 56679999999999999876210 001111
Q ss_pred ---------CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 322 ---------SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 322 ---------s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
...+.++++.|++|.+|.+..++|+++.+++.++.+......
T Consensus 209 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~----------------------------- 259 (376)
T 3ezs_A 209 LEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAY----------------------------- 259 (376)
T ss_dssp HHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTT-----------------------------
T ss_pred HHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhh-----------------------------
Confidence 145778999999999984223468888776655443221000
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRC 472 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~ 472 (632)
. . .+.+.+...++. ++|+.. ..++.+.++.+.
T Consensus 260 --------~--~------------~~~~~~~~~a~~------------------------~~l~~~--~~~~~~~~~~~~ 291 (376)
T 3ezs_A 260 --------L--G------------YTSANAIQKASE------------------------AAWLDD--RHAEFFRNIYAN 291 (376)
T ss_dssp --------T--C------------CCCCHHHHHHHH------------------------HHHHCS--HHHHHHHHHHHH
T ss_pred --------h--c------------CCCChHHHHHHH------------------------HHHhCc--HHHHHHHHHHHH
Confidence 0 0 001111122221 344321 125777778888
Q ss_pred HHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHH
Q 006746 473 LINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 473 L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
+.+++.+.|..+ . .| ..+..+.+.+.+ ..+.+++|++++||.++.|..|...
T Consensus 292 ~~~~l~~~l~~~-----------~--~~----~~~~~~~~~~~~------~~~~~~~l~~~~gi~v~~g~~~~~~----- 343 (376)
T 3ezs_A 292 NLKLARKIFKNT-----------L--IY----PYSFYVYLPVQN------GENFAKTLYQNEGIITLPALYLGRN----- 343 (376)
T ss_dssp HHHHHHHHSTTC-----------C--CC----SBSSEEEEECSC------HHHHHHHHHHHHCCBCEEGGGGCST-----
T ss_pred HHHHHHHHhcCC-----------C--CC----CcceEEEEECCC------HHHHHHHHHHhCCEEEeCcHHhCCC-----
Confidence 888887776411 1 11 245555555541 2344455666589999988655421
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
....+.||+|++. |.+||+++++.|+++++.
T Consensus 344 ---------------------------~~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 344 ---------------------------RIGADYVRLALVY--DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp ---------------------------TTTTTEEEEECCS--CHHHHHHHHHHHHHHHCC
T ss_pred ---------------------------CCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 1234699999984 999999999999998753
No 155
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.80 E-value=2.6e-17 Score=179.85 Aligned_cols=351 Identities=11% Similarity=0.094 Sum_probs=218.1
Q ss_pred CCceEeecCCC---CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc
Q 006746 107 SNHTCLDYFGI---GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL 183 (632)
Q Consensus 107 ~~~vyLD~ag~---gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l 183 (632)
.+..|||+.+. ..++..+++++..... .|+ ....+.+.|++|++++
T Consensus 40 ~~~~ylD~~~~~~~~~~~~~~~~a~~~~~~-----------------------------~y~--~~~~~~~l~~~la~~~ 88 (456)
T 2ez2_A 40 SKDIYIDLLTDSGTNAMSDKQWAGMMMGDE-----------------------------AYA--GSENFYHLERTVQELF 88 (456)
T ss_dssp GGGCSEECSCSSSCCCCCHHHHHHHTTCCC-----------------------------CSS--SCHHHHHHHHHHHHHH
T ss_pred cccceeeeccccCCccCCHHHHHHhhcchh-----------------------------hcc--cChhHHHHHHHHHHHh
Confidence 45779998543 3667888888652100 011 1234568999999999
Q ss_pred CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEEeccCC---------cccc
Q 006746 184 NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSAEFSWP---------RLRI 254 (632)
Q Consensus 184 ~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~---------~~~i 254 (632)
+.+ .++||+|+|+|+.+++.++ +++|| |+....|+. ++ ...++..|++++.++++.. .+.+
T Consensus 89 ~~~----~~~~~~~gt~a~~~al~~l-~~~gd-i~~~~~~~~-~~---~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~ 158 (456)
T 2ez2_A 89 GFK----HIVPTHQGRGAENLLSQLA-IKPGQ-YVAGNMYFT-TT---RYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDI 158 (456)
T ss_dssp CCS----EEEEESSHHHHHHHHHHHH-CCTTC-EEEESSCCH-HH---HHHHHHTTCEEEECBCGGGGCTTCCCSCTTCB
T ss_pred CCC----cEEEeCCcHHHHHHHHHHh-CCCCC-Eeccccccc-hh---HHHHHHcCCEEEEecccccccccccccccCCC
Confidence 985 5999999999999999998 78999 777777754 22 2334678999999988621 2568
Q ss_pred CHHHHHHHHHhcCcCCCceeEEEEeccCC-CCccccc---hH-HHHHHhhCCcEEEEeccccCC---------CCCCCCC
Q 006746 255 NSEKLRKMVVSKGKKKKQRGLFVFPLHSR-MTGARYP---YL-WMRIAQENDWHILIDACALGP---------KDMDSFG 320 (632)
Q Consensus 255 ~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn-~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g---------~~m~~ld 320 (632)
|+++|+++|++++ ...++++++...+| .||..+| ++ |+++|+++|+++++|.++..| .......
T Consensus 159 d~~~l~~~i~~~t--~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~ 236 (456)
T 2ez2_A 159 DLKKLQKLIDEKG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKS 236 (456)
T ss_dssp CHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSC
T ss_pred CHHHHHHHHHhcc--ccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcc
Confidence 9999999998754 12458888887777 9999998 88 999999999999999998763 2101111
Q ss_pred CC------CCCCcEEEEccccccCCCCCceEEEEEe-CCCccccCCCCCCCceeecccccccccccccCCCCCCccccch
Q 006746 321 LS------LVRPDFLICSFYQIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSK 393 (632)
Q Consensus 321 ls------~~~~Df~~~S~hK~~G~~P~G~G~L~Vr-~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~ 393 (632)
+. ...+|++++|+||+++. | ..|+++.+ +++++.+..... .+
T Consensus 237 ~~~~~~~~~~~~d~~~~S~kk~~~~-~-~gG~~~~~~~~~~~~~~~~~~------------~~----------------- 285 (456)
T 2ez2_A 237 IAEIVHEMFSYADGCTMSGKKDCLV-N-IGGFLCMNDDEMFSSAKELVV------------VY----------------- 285 (456)
T ss_dssp HHHHHHHHHTTCSEEEEETTTTTCC-S-SCEEEEESCHHHHHHHHHHHH------------HH-----------------
T ss_pred hhhhhhhhcccCCEEEEeCcccCCC-C-ceeEEEECCHHHHHHHHHHHh------------hc-----------------
Confidence 10 12469999999998773 3 36777774 444443322100 00
Q ss_pred hhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHH
Q 006746 394 SKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCL 473 (632)
Q Consensus 394 ~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L 473 (632)
.+...+. | .+...+.+ .++...+.+. +...+|.+.+
T Consensus 286 ------~~~~~~~----------~-~~~~~~~a--------------------------~a~~~~~~~~-~~~~~~~~~~ 321 (456)
T 2ez2_A 286 ------EGMPSYG----------G-LAGRDMEA--------------------------MAIGLREAMQ-YEYIEHRVKQ 321 (456)
T ss_dssp ------TCCTTTT----------T-CCHHHHHH--------------------------HHHHHHHHTC-HHHHHHHHHH
T ss_pred ------cCccccc----------C-cchhHHHH--------------------------HHHHHHHHhH-HHHHHHHHHH
Confidence 0000000 0 00011111 1333333333 4566777888
Q ss_pred HHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEc----cCCCCcc-CHHHHHHHHHhCCcEEc-cCccCChH
Q 006746 474 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVF----DWKREKI-EPVLVQKLADRENISLS-YGSLHHIW 547 (632)
Q Consensus 474 ~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~----~~~G~~i-~~~~V~kla~~~gI~lr-~G~~c~~~ 547 (632)
.+++.+.|.++ |.+ ++.|. .+..+.+.+. +.+...+ ...+..+|+.++||.+. .|.+|.+.
T Consensus 322 ~~~l~~~L~~~------g~~---~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~ 388 (456)
T 2ez2_A 322 VRYLGDKLKAA------GVP---IVEPV----GGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGR 388 (456)
T ss_dssp HHHHHHHHHHT------TCC---BCSSC----CSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCB
T ss_pred HHHHHHHHhcC------CCc---cccCC----CceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeeccccccccc
Confidence 99999999886 332 33442 3556666653 2121112 11113444477899753 45433210
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCC-CCHHHHHHHHHHHHHhhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYL-ANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~-~t~eDV~rlv~~l~~~l~~ 612 (632)
... . +. ....+.+.||+|++.. ++.+||+++++.|+++++.
T Consensus 389 --~~~-------~------g~---------~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 389 --NNV-------T------GE---------HHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp --CTT-------T------CS---------BCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred --Ccc-------c------cc---------cccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 000 0 00 0011246899999988 9999999999999999876
No 156
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.80 E-value=1.7e-18 Score=186.24 Aligned_cols=340 Identities=15% Similarity=0.080 Sum_probs=208.8
Q ss_pred CCceEeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHH--c
Q 006746 107 SNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF--L 183 (632)
Q Consensus 107 ~~~vyLD~ag~g-l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~--l 183 (632)
.+.++|+.+... +.++.+++++.+.+.... +......|+.. .-..+.|+.|+++ .
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--------------------~~~~~~~y~~~--~g~~~lr~~la~~l~~ 90 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIARLS--------------------SPTTCRGYGPD--FGLPALRQKLSEDFYR 90 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHHHT--------------------SSSCCCCCCCT--TCCHHHHHHHHHTTST
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhccc--------------------ccccccCCCCC--CCCHHHHHHHHHHHHc
Confidence 457888887665 456777777655332110 00000112110 1124789999999 4
Q ss_pred C-CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCE-EEEEeccCCccccCHHHHH
Q 006746 184 N-ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGAR-VMSAEFSWPRLRINSEKLR 260 (632)
Q Consensus 184 ~-a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~-v~~v~~~~~~~~i~~~~l~ 260 (632)
| ++++ .|+||+|+|+++.++...+ .+||+|++. ..|++ ....++..|++ ++.++.+. .+.+.. +++
T Consensus 91 g~~~~~--~v~~~~G~~~al~~~~~~~--~~gd~Vl~~~p~y~~-----~~~~~~~~g~~~~~~~~~~~-~~~~~~-~l~ 159 (400)
T 3asa_A 91 GFVDAK--EIFISDGAKVDLFRLLSFF--GPNQTVAIQDPSYPA-----YLDIARLTGAKEIIALPCLQ-ENAFFP-EFP 159 (400)
T ss_dssp TSSCGG--GEEEESCHHHHHHHHHHHH--CSSCEEEEEESCCHH-----HHHHHHHTTCSEEEEEECCG-GGTTCC-CCC
T ss_pred CCCCHH--HEEEccChHHHHHHHHHHc--CCCCEEEECCCCcHH-----HHHHHHHcCCcceEecccch-hcCccc-Chh
Confidence 7 5554 7999999999999987654 689997654 45553 23445678998 99998862 222221 111
Q ss_pred HHHHhcCcCCCceeEEEEeccCCCCccccch---H-HHHHHhhCCcEEEEecccc-CCCC-CCCCCCCCC----CCcEEE
Q 006746 261 KMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACAL-GPKD-MDSFGLSLV----RPDFLI 330 (632)
Q Consensus 261 ~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl---~-i~~~a~~~g~~vlvDaaq~-~g~~-m~~ldls~~----~~Df~~ 330 (632)
+ + .+++++++++.+|+||..+|. + |+++|+++|+++++|.++. ...+ ..+..+..+ +.++++
T Consensus 160 ~-~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (400)
T 3asa_A 160 E-D-------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEI 231 (400)
T ss_dssp T-T-------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEE
T ss_pred h-c-------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEE
Confidence 1 0 246899999999999999985 4 6778999999999999987 3211 012333222 245999
Q ss_pred EccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCcc
Q 006746 331 CSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGP 408 (632)
Q Consensus 331 ~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~ 408 (632)
.|++|+|| +.| +|+++++++....+. . .+ ...+ ... ...+ +
T Consensus 232 ~s~sK~~g--~~GlriG~~~~~~~~~~~~~----~-~~------~~~~----------------~~~---~~~~--~--- 274 (400)
T 3asa_A 232 NSFSKPLG--FAGIRLGWTVIPQELTYADG----H-FV------IQDW----------------ERF---LSTT--F--- 274 (400)
T ss_dssp EECCGGGT--TTTCCCEEEECCTTCBCTTS----C-BH------HHHH----------------HHH---HHHH--C---
T ss_pred ecchhhcC--CcchheeEEeeChhhccchh----h-hH------HHHH----------------HHH---hccC--c---
Confidence 99999999 446 699999887643221 0 00 0000 000 0000 0
Q ss_pred chhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCC
Q 006746 409 MSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPN 488 (632)
Q Consensus 409 ~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~ 488 (632)
++.+.+...++. ++|+ ...++.+.++.+.+.++|.+.|.++
T Consensus 275 --------~~~~~~~~~a~~------------------------~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~---- 315 (400)
T 3asa_A 275 --------NGASIPAQEAGV------------------------AGLS---ILPQLEAIHYYRENSDLLRKALLAT---- 315 (400)
T ss_dssp --------CCCCHHHHHHHH------------------------HHHH---HTTTCHHHHHHHHHHHHHHHHHHHT----
T ss_pred --------cCCChHHHHHHH------------------------HHhC---cHHHHHHHHHHHHHHHHHHHHHHHC----
Confidence 111222222221 3333 2257788899999999999999887
Q ss_pred CCCCCcEEEECCCCCCCCCcEEEEE-EccCCCCccCH-HHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcc
Q 006746 489 TEGNALVKIYGPKIRFDRGPALAFN-VFDWKREKIEP-VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDRE 566 (632)
Q Consensus 489 ~~G~p~v~Iygp~~~~~rg~ivaFn-v~~~~G~~i~~-~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~ 566 (632)
| +++++|. .+..+.+. +.+ + ++. +.++++++++||.++.|..|...
T Consensus 316 --g---~~~~~~~----~~~~~~~~~~~~--~--~~~~~~~~~l~~~~gv~v~~g~~f~~~------------------- 363 (400)
T 3asa_A 316 --G---FEVFGGE----HAPYLWVKPTQA--N--ISDRDLFDFFLREYHIAITPGIGFGRS------------------- 363 (400)
T ss_dssp --T---CEEEECS----SSSEEEEECCCT--T--CCTTTHHHHHHHHHSEECEEGGGGCGG-------------------
T ss_pred --C---CeeeCCC----CceEEEEeccCC--C--CCHHHHHHHHHHhCCEEEeChhHhCCC-------------------
Confidence 4 4566542 35667777 542 1 233 45567777789999887544320
Q ss_pred ccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 567 AKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+.||+| ++++.+|++++++.|+++++.
T Consensus 364 ---------------~~~~iRis--~~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 364 ---------------GSGFVRFS--SLGKREDILAACERLQMAPAL 392 (400)
T ss_dssp ---------------GTTCEEEE--CCSCHHHHHHHHHHHHC----
T ss_pred ---------------CCCEEEEE--eeCCHHHHHHHHHHHHHHHHh
Confidence 23589999 478999999999999887653
No 157
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.80 E-value=1.1e-17 Score=178.88 Aligned_cols=302 Identities=10% Similarity=0.026 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHcCCC-CCCc-cEEEeCCHHHHHHHHHhhCCCCCC-----CeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 171 LESAMKKRIMDFLNIS-ENDY-GMVFTANRTSAFKLLAESYPFMSV-----KNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~-~~ey-~vvft~naT~al~lv~~sl~~~~g-----d~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
+.+.+.+.+.+.+|.+ .+.. .|+||+|+|+|+.+++.++ .++| |+|++. ..|++ ....++..|+++
T Consensus 71 lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~-~~~g~~~~~d~vl~~~p~~~~-----~~~~~~~~g~~~ 144 (396)
T 3jtx_A 71 LRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTV-LNPVSDGIKPAIVSPNPFYQI-----YEGATLLGGGEI 144 (396)
T ss_dssp HHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHH-CCC---CCCCEEEEEESCCHH-----HHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHH-hCCCCccCCCEEEEcCCCcHh-----HHHHHHHcCCEE
Confidence 3344444444445753 1222 6999999999999999998 5676 677654 45543 234567789999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCCC--
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKDM-- 316 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~m-- 316 (632)
+.++.+.....+|.++|++++.++ +++++++..+|+||..+|.+ |+++|+++|+++++|.++.....-
T Consensus 145 ~~v~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 218 (396)
T 3jtx_A 145 HFANCPAPSFNPDWRSISEEVWKR------TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN 218 (396)
T ss_dssp EEEECCTTTCCCCGGGSCHHHHHT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC
T ss_pred EEeecCCCCCccCHHHHHHhhccC------cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 999986444467889999988764 48999999999999999865 567789999999999997752100
Q ss_pred CCCCC--------CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 317 DSFGL--------SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 317 ~~ldl--------s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
.++.+ ...+.++++.|++|.||.+..++|+++.+++.++.+....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--------------------------- 271 (396)
T 3jtx_A 219 KPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYR--------------------------- 271 (396)
T ss_dssp CCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHHHH---------------------------
T ss_pred CCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHHHH---------------------------
Confidence 12221 1257789999999988842223687776655544332100
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
.. .. ++.+.+...++. .+|+. ...++.+.+
T Consensus 272 -----~~---~~----------------~~~~~~~~~a~~------------------------~~l~~--~~~~~~~~~ 301 (396)
T 3jtx_A 272 -----TY---HG----------------SAMSIPVQRASI------------------------AAWDD--EQHVIDNRR 301 (396)
T ss_dssp -----HH---HT----------------CCCCHHHHHHHH------------------------HHHHC--CHHHHHHHH
T ss_pred -----hh---cc----------------cCCCHHHHHHHH------------------------HHhCC--HHHHHHHHH
Confidence 00 00 011112222221 34432 123677788
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHH-HHHHHHHhCCcEEccCccCChH
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPV-LVQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~-~V~kla~~~gI~lr~G~~c~~~ 547 (632)
+.+...+++.+.|.++ +.++.| ..+..+.+.+.+ .+.. .+++|++++||.++.|..|...
T Consensus 302 ~~~~~~~~l~~~l~~~----------~~~~~~----~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~ 362 (396)
T 3jtx_A 302 LYQEKFERVIPILQQV----------FDVKLP----DASFYIWLKVPD-----GDDLAFARNLWQKAAIQVLPGRFLARD 362 (396)
T ss_dssp HHHHHHHHHHHHHTTT----------SCCCCC----SSSSEEEEECTT-----SCHHHHHHHHHHHHCEECEEGGGGCCC
T ss_pred HHHHHHHHHHHHHHhc----------CCccCC----CeeEEEEEECCC-----CCHHHHHHHHHHHCCEEEeCChHhCCc
Confidence 8888888888888764 112222 234556666654 3444 4456667889999988766542
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
.. ....+.+.||+|++. +.+||+++++.|++++
T Consensus 363 ~~----------------------------~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 363 TE----------------------------QGNPGEGYVRIALVA--DVATCVKAAEDIVSLY 395 (396)
T ss_dssp CT----------------------------TCCTTTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred cc----------------------------ccCCCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 10 011245799999986 9999999999998875
No 158
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.80 E-value=4.9e-18 Score=185.29 Aligned_cols=297 Identities=14% Similarity=0.109 Sum_probs=192.3
Q ss_pred HHHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCE------
Q 006746 173 SAMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGAR------ 241 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~------ 241 (632)
.+.|++|++++ +++++ .|+||+|+++++.++ .++ +++||+|++. ..|++ . ...++..|++
T Consensus 114 ~~lr~~ia~~~~~g~~~~~~--~i~~t~G~~~al~~~-~~l-~~~gd~Vl~~~p~~~~-~----~~~~~~~g~~g~~~~~ 184 (449)
T 3qgu_A 114 GALREAVASTFYGHAGRAAD--EIFISDGSKCDIARI-QMM-FGSKPTVAVQDPSYPV-Y----VDTSVMMGMTGDHNGT 184 (449)
T ss_dssp HHHHHHHHHHHHTTTTCCGG--GEEEESCHHHHHHHH-HHH-HCSSSCEEEEESCCTH-H----HHHHHHHTCSCCBCSS
T ss_pred HHHHHHHHHHHHcCCCCCHH--HEEEccCHHHHHHHH-HHH-hCCCCEEEEcCCCChh-H----HHHHHHcCCccccccc
Confidence 47899999998 67655 899999999999998 666 6889997654 45654 2 2345667888
Q ss_pred ----EEEEeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC
Q 006746 242 ----VMSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG 312 (632)
Q Consensus 242 ----v~~v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~ 312 (632)
++.++.+.. ....+.+++ .+++++++...+|+||..+| ++ |+++|+++|+++++|.++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~ 253 (449)
T 3qgu_A 185 GFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYAL 253 (449)
T ss_dssp SBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG
T ss_pred ccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHh
Confidence 999988633 222222111 24589999999999999998 55 67789999999999998775
Q ss_pred ----CCCCCCCCCCC----CCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCC
Q 006746 313 ----PKDMDSFGLSL----VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSC 384 (632)
Q Consensus 313 ----g~~m~~ldls~----~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~ 384 (632)
+. .+..+.. .+.++++.|++|.||.+...+|+++++++.++...... ...|.
T Consensus 254 ~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~-----------~~~~~------- 313 (449)
T 3qgu_A 254 YISNPD--CPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPV-----------HADWN------- 313 (449)
T ss_dssp GCCCTT--SCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBH-----------HHHHH-------
T ss_pred hhcCCC--CCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhH-----------HHHHH-------
Confidence 22 1222221 35679999999999842334899999887754200000 00000
Q ss_pred CCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHH
Q 006746 385 ETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLT 464 (632)
Q Consensus 385 ~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~ 464 (632)
.. ...+ + .+.+.+...+.. .+|+......++
T Consensus 314 ---------~~---~~~~--~-----------~~~~~~~~~a~~------------------------~~l~~~~~~~~~ 344 (449)
T 3qgu_A 314 ---------RV---MTTC--F-----------NGASNIVQAGGL------------------------ACLQPEGLKEMN 344 (449)
T ss_dssp ---------HH---HHHS--C-----------CCCCHHHHHHHH------------------------HHTSHHHHHHHH
T ss_pred ---------HH---hhcc--c-----------CCCCHHHHHHHH------------------------HHHhhcCHHHHH
Confidence 00 0000 0 011111112111 333321112367
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHH-HHHHHHHhCCcEEccCcc
Q 006746 465 MISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPV-LVQKLADRENISLSYGSL 543 (632)
Q Consensus 465 ~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~-~V~kla~~~gI~lr~G~~ 543 (632)
.+.++.+.+.++|++.|.++ | +++++|. .+..+.+.+.+ ++.. .+++|++++||.++.|..
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~l~~~~gI~v~pg~~ 406 (449)
T 3qgu_A 345 AMIKFYKENAQILKTTFTEM------G---FSVYGGD----DAPYIWVGFPG-----KPSWDVFAEILERCNIVTTPGSG 406 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHT------T---CCEEESS----SSSEEEEECTT-----SCHHHHHHHHHHHHCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHC------C---CeeeCCC----CeeEEEEECCC-----CCHHHHHHHHHHHCCEEEecchH
Confidence 77888999999999999987 4 3445442 46666666652 3444 455777778999988755
Q ss_pred CChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 544 HHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 544 c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|.+ .+.+.||+|+ .++.+||+++++.|+++++.
T Consensus 407 f~~----------------------------------~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 407 YGP----------------------------------AGEGFVRASA--FGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp GCG----------------------------------GGTTEEEEEC--CSCHHHHHHHHHHHHHHHC-
T ss_pred hCC----------------------------------CCCCeEEEEe--cCCHHHHHHHHHHHHHHHHh
Confidence 432 1346999994 56999999999999998765
No 159
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.7e-18 Score=189.51 Aligned_cols=303 Identities=10% Similarity=0.080 Sum_probs=199.6
Q ss_pred HHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEecc
Q 006746 174 AMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFS 248 (632)
Q Consensus 174 ~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~ 248 (632)
+.|+.|++++ |.+.+...|++|+|+|+|+.+++.++ .++||+|++. ..|++ . ...++..|++++.++.+
T Consensus 99 ~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~-~----~~~~~~~g~~~~~v~~~ 172 (447)
T 3b46_A 99 SLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGL-LNAGDEVIVFEPFFDQ-Y----IPNIELCGGKVVYVPIN 172 (447)
T ss_dssp HHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCCchh-H----HHHHHHcCCEEEEEeCC
Confidence 5666666665 54322227999999999999999998 6889997654 45553 2 23456789999999986
Q ss_pred CC-----------ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccCC
Q 006746 249 WP-----------RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALGP 313 (632)
Q Consensus 249 ~~-----------~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~g 313 (632)
.. +..+++++|+++|.+ +++++++++.+|+||..+| ++ |+++|+++|+++++|.++...
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 246 (447)
T 3b46_A 173 PPKELDQRNTRGEEWTIDFEQFEKAITS------KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHL 246 (447)
T ss_dssp CCGGGGTSCBCSTTSEECHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC
T ss_pred CccccccccccccCcccCHHHHHHhhcc------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhc
Confidence 33 346899999888764 3589999999999999985 67 889999999999999987652
Q ss_pred C---CCCCC-CC--CCCCCcEEEEccccccCCCCCc--eEEEEE-eCCCccccCCCCCCCceeecccccccccccccCCC
Q 006746 314 K---DMDSF-GL--SLVRPDFLICSFYQIFGENPSG--FGCLFV-KKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSC 384 (632)
Q Consensus 314 ~---~m~~l-dl--s~~~~Df~~~S~hK~~G~~P~G--~G~L~V-r~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~ 384 (632)
. ...++ .+ ..++.|+++.|++|.|| ++| +|++++ ++++++.+....
T Consensus 247 ~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~--~~G~riG~~~~~~~~l~~~l~~~~----------------------- 301 (447)
T 3b46_A 247 YFTDSFTRIATLSPEIGQLTLTVGSAGKSFA--ATGWRIGWVLSLNAELLSYAAKAH----------------------- 301 (447)
T ss_dssp BCSSCCCCGGGSCHHHHTTEEEEEEHHHHTT--CTTSCCEEEECSCHHHHHHHHHHH-----------------------
T ss_pred ccCCCCcCHHHcCCCCCCcEEEEecCchhcC--CcchhhEEEEeCCHHHHHHHHHHH-----------------------
Confidence 1 00111 12 13478999999999998 447 899998 665544332100
Q ss_pred CCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC-H
Q 006746 385 ETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG-L 463 (632)
Q Consensus 385 ~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G-l 463 (632)
.. . .+ +.+.+...++. ++|+.....+ +
T Consensus 302 ---------~~---~----~~------------~~~~~~~~a~~------------------------~aL~~~~~~~~~ 329 (447)
T 3b46_A 302 ---------TR---I----CF------------ASPSPLQEACA------------------------NSINDALKIGYF 329 (447)
T ss_dssp ---------HH---H----TS------------SCCHHHHHHHH------------------------HHHHHHHHHTHH
T ss_pred ---------hh---c----cC------------CCChHHHHHHH------------------------HHHhCCcchHHH
Confidence 00 0 00 01111222222 5666543223 6
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC---C--------CccCH-HHHHHHH
Q 006746 464 TMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK---R--------EKIEP-VLVQKLA 531 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~---G--------~~i~~-~~V~kla 531 (632)
+.+.++.+.+.++|.+.|.++ |. +++.|. .+..+.+.+.+.. + ...+. +.+++++
T Consensus 330 ~~~~~~~~~~~~~l~~~L~~~------g~---~~~~~~----~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 396 (447)
T 3b46_A 330 EKMRQEYINKFKIFTSIFDEL------GL---PYTAPE----GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLI 396 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------TC---CEECCS----BSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC------CC---eecCCC----eeEEEEEecccccCccccccccccccCCCHHHHHHHHH
Confidence 788899999999999999987 43 344442 3445556664310 0 01223 4445677
Q ss_pred HhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 532 DRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 532 ~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
+++||.++.|..+..... ...+.+.||+|++. +.|||+..++.|+++
T Consensus 397 ~~~gV~v~pg~~f~~~~~-----------------------------~~~~~~~iRls~~~--~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 397 NELGVVAIPPTEFYIKEH-----------------------------EKAAENLLRFAVCK--DDAYLENAVERLKLL 443 (447)
T ss_dssp HHTCEECBCGGGGSCGGG-----------------------------GGGGTTEEEEECCS--CHHHHHHHHHHGGGG
T ss_pred HhCCEEEECchHhCCCCc-----------------------------cCCCCCEEEEEEeC--CHHHHHHHHHHHHHH
Confidence 789999987643321100 00124699999984 899999999988875
No 160
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.79 E-value=1.2e-17 Score=180.47 Aligned_cols=342 Identities=10% Similarity=0.053 Sum_probs=213.5
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|+|.++ .|+.++.+++++.+.+... .+... .|+ ......+.|+.|+
T Consensus 39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~--------------------~~~~~--~~~--~~~~~~~l~~~la 94 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKL--------------------SHTCF--QVL--AYEPYLELCEIMN 94 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTC--------------------SCCCT--TTE--ECHHHHHHHHHHH
T ss_pred CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhC--------------------CCccc--ccc--CCHHHHHHHHHHH
Confidence 4567888753 3556788888877654321 00000 011 2355678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHh---hCCCCCCCeEE-EeccccchhhHHHHHHHHhcCC-------------EEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAE---SYPFMSVKNLL-TVYDYESEAVEAMIRTSEKRGA-------------RVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~---sl~~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~-------------~v~ 243 (632)
++++.+. ...|+||+|+|+|+.+++. .+ ..+| +|+ ....||.....++. ..|. .++
T Consensus 95 ~~~~~~~-~~~v~~~~g~~~a~~~~~~~a~~~-~~~~-~vi~~~p~y~~~~~~~~~----~~g~~~~~~~~~~~~~~~v~ 167 (426)
T 1sff_A 95 QKVPGDF-AKKTLLVTTGSEAVENAVKIARAA-TKRS-GTIAFSGAYHGRTHYTLA----LTGKVNPYSAGMGLMPGHVY 167 (426)
T ss_dssp HHSSCSS-CEEEEEESSHHHHHHHHHHHHHHH-HTCC-EEEEETTCCCCSSHHHHH----HSSCCTTTTTTSCCCCSSEE
T ss_pred HhCCccc-ccEEEEeCchHHHHHHHHHHHHHh-hCCC-eEEEECCCcCCCchHhhh----hcCCccccccccCCCCCCcE
Confidence 9994232 1379999999999999987 54 2445 655 44567753333322 2232 267
Q ss_pred EEeccC----CccccCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccc----hH-HHHHHhhCCcEEEEecccc-C
Q 006746 244 SAEFSW----PRLRINSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYP----YL-WMRIAQENDWHILIDACAL-G 312 (632)
Q Consensus 244 ~v~~~~----~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~ 312 (632)
.++++. ..+.+++++|+++|++.. ...++++|++.. .+| ||...| ++ |.++|+++|+++++|.++. +
T Consensus 168 ~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~ 245 (426)
T 1sff_A 168 RALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGA 245 (426)
T ss_dssp EECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred EeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhcc
Confidence 777752 123468899999987410 012467887754 456 998888 88 9999999999999999987 2
Q ss_pred CCC--CCCCCCCCCCCcEEEEccccccCCCCCc--eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 313 PKD--MDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 313 g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
+.. +..++.....+|++ |+.|.+| + | +|+++++++.++.+.+...+++ |
T Consensus 246 ~~~g~~~~~~~~~~~~di~--s~sK~~~--~-GlriG~~~~~~~~~~~l~~~~~~~~----------~------------ 298 (426)
T 1sff_A 246 GRTGTLFAMEQMGVAPDLT--TFAKSIA--G-GFPLAGVTGRAEVMDAVAPGGLGGT----------Y------------ 298 (426)
T ss_dssp TTTSSSSGGGGTTSCCSEE--EECGGGG--T-SSCCEEEEEEHHHHTTSCTTSBCCS----------S------------
T ss_pred CcccchhhhhhcCCCCCEE--EEccccc--C-CCceEEEEEcHHHHhhhccCCcCcC----------C------------
Confidence 221 11223323357876 6679999 6 7 5999999877665543111000 0
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
. .+.....++. ++|+.+.+. .+.+
T Consensus 299 -----------------~------------~~~~~~~a~~------------------------aal~~~~~~---~~~~ 322 (426)
T 1sff_A 299 -----------------A------------GNPIACVAAL------------------------EVLKVFEQE---NLLQ 322 (426)
T ss_dssp -----------------S------------SCHHHHHHHH------------------------HHHHHHHHT---THHH
T ss_pred -----------------C------------CCHHHHHHHH------------------------HHHHHHHhc---CHHH
Confidence 0 0111112222 677777652 4668
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC----CCccCHHHHHHHHHhCCcEEccCccC
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK----REKIEPVLVQKLADRENISLSYGSLH 544 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~----G~~i~~~~V~kla~~~gI~lr~G~~c 544 (632)
|++.+.+++++.|.++.. ..+.+..+. ..|.++.+.+.+.. ...++...+.+.+.++||.++.|..
T Consensus 323 ~~~~~~~~l~~~l~~~~~----~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~- 392 (426)
T 1sff_A 323 KANDLGQKLKDGLLAIAE----KHPEIGDVR-----GLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP- 392 (426)
T ss_dssp HHHHHHHHHHHHHHHHHH----TCTTEEEEE-----EETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST-
T ss_pred HHHHHHHHHHHHHHHHHH----hCCCeEEEE-----EEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC-
Confidence 888999999999987620 024443221 13788888885311 0012344555545567999875420
Q ss_pred ChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 545 HIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
..+.||+|+++.++.+||+++++.|+++++
T Consensus 393 -------------------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 422 (426)
T 1sff_A 393 -------------------------------------YYNVLRILVPLTIEDAQIRQGLEIISQCFD 422 (426)
T ss_dssp -------------------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 135899999999999999999999998875
No 161
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.79 E-value=1.7e-17 Score=180.61 Aligned_cols=168 Identities=11% Similarity=0.058 Sum_probs=134.7
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+.......++.++++++++|.+ .+++++|+++|+.+++.++ .++||+|++. ..|++ ....+...+++.|+++
T Consensus 75 y~r~~~p~~~~l~~~la~~~g~~----~~~~~~sG~~Ai~~al~~l-~~~Gd~Vi~~~~~y~~-~~~~~~~~~~~~g~~~ 148 (414)
T 3ndn_A 75 YSRYGNPTVSVFEERLRLIEGAP----AAFATASGMAAVFTSLGAL-LGAGDRLVAARSLFGS-CFVVCSEILPRWGVQT 148 (414)
T ss_dssp BTTTCCHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEESCCCHH-HHHHHHTHHHHTTCEE
T ss_pred cCCCCChHHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEcCCccch-HHHHHHHHHHHcCcEE
Confidence 33333466789999999999974 5789999999999999998 7899997754 46664 3444445567799999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++.+ |+++|+++|+++ +++|.+...+|+||...|++ |.++|+++|+++++|.++..|....++
T Consensus 149 ~~v~~~------d~~~l~~ai~~~------t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-- 214 (414)
T 3ndn_A 149 VFVDGD------DLSQWERALSVP------TQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-- 214 (414)
T ss_dssp EEECTT------CHHHHHHHTSSC------CSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG--
T ss_pred EEeCCC------CHHHHHHhcCCC------CeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch--
Confidence 999864 788999988764 48999999999999999999 999999999999999998765311233
Q ss_pred CCCCCcEEEEccccccCCCCCc---eEEEEEeCCCc
Q 006746 322 SLVRPDFLICSFYQIFGENPSG---FGCLFVKKSTV 354 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G---~G~L~Vr~~~~ 354 (632)
.+++|+++.|++|++| +.| .|+++.+++.+
T Consensus 215 -~~g~div~~S~sK~l~--~~G~~~~G~vv~~~~~~ 247 (414)
T 3ndn_A 215 -PLGVDVVVYSGTKHID--GQGRVLGGAILGDREYI 247 (414)
T ss_dssp -GGTCSEEEEETTTTTT--CSSCCCCEEEEECHHHH
T ss_pred -hcCCCeEeccCCcccc--CCCCceEEEEEECHHHH
Confidence 4578999999999998 557 69988877654
No 162
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.79 E-value=4.4e-18 Score=186.46 Aligned_cols=353 Identities=11% Similarity=0.038 Sum_probs=218.2
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHH-HHHHHHHHcCCCCCCccE
Q 006746 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA-MKKRIMDFLNISENDYGM 192 (632)
Q Consensus 114 ~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~-~R~~ia~~l~a~~~ey~v 192 (632)
.++-.++++.+++++...+... |..+++.+.+..|....+.+++ +|+++++++|++. ..
T Consensus 51 ~~~~~~~~~~v~~a~~~~~~~~-----------------~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~---~~ 110 (447)
T 3h7f_A 51 IASENFVPRAVLQAQGSVLTNK-----------------YAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEF---AN 110 (447)
T ss_dssp CTTCCCCCHHHHHHHTSGGGGC-----------------CCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE---EE
T ss_pred ecCCCCCCHHHHHHHHHHhcCC-----------------ccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCc---eE
Confidence 3455677999999987654210 1124555544334333333344 4499999999973 34
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHH-HHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCC
Q 006746 193 VFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAM-IRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKK 270 (632)
Q Consensus 193 vft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~-~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~ 270 (632)
+++.|+|+|+..++.++ .++||+|++. ..|++....+. ... ...+..+..++++..++.+|.++|++++.+.+
T Consensus 111 v~~~sGs~a~~~a~~~~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~--- 185 (447)
T 3h7f_A 111 VQPHSGAQANAAVLHAL-MSPGERLLGLDLANGGHLTHGMRLNF-SGKLYENGFYGVDPATHLIDMDAVRATALEFR--- 185 (447)
T ss_dssp CCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTCCGGGTCTTSH-HHHSSEEEEECCCTTTCSCCHHHHHHHHHHHC---
T ss_pred EEeCCHHHHHHHHHHHh-cCCCCEEEecCcccccccchhhhhhh-cCCeeEEEEcCcCcccCCcCHHHHHHHHHhcC---
Confidence 54788899999999988 7899997754 45543111111 011 12356777777765567799999999996532
Q ss_pred CceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCC--CCCCCCCCCCcEEEEccccccCCCCCceEEE
Q 006746 271 KQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDM--DSFGLSLVRPDFLICSFYQIFGENPSGFGCL 347 (632)
Q Consensus 271 ~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m--~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L 347 (632)
++++++....|.++. |++ |.++|+++|+++++|.+|+.|... ...+. ...+|++++|+||.+|. |.| |++
T Consensus 186 --~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~-~~~~di~~~s~sK~l~G-~~g-G~i 258 (447)
T 3h7f_A 186 --PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSP-VPHADVVSTTVHKTLGG-GRS-GLI 258 (447)
T ss_dssp --CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS-TTTCSEEEEESSGGGCC-CSC-EEE
T ss_pred --CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCC-CCCCcEEEecCCcCCCC-CCe-EEE
Confidence 478888777676665 999 999999999999999998653100 01111 12579999999997765 877 999
Q ss_pred EEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHh
Q 006746 348 FVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEV 427 (632)
Q Consensus 348 ~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l 427 (632)
+.+++.++.+.+.... ++ .|+++.+.+.++
T Consensus 259 ~~~~~~~~~l~~~~~~-------------------------------------~~-------------~~~~~~~~~~a~ 288 (447)
T 3h7f_A 259 VGKQQYAKAINSAVFP-------------------------------------GQ-------------QGGPLMHVIAGK 288 (447)
T ss_dssp EECGGGHHHHHHHHTT-------------------------------------TT-------------CSSCCHHHHHHH
T ss_pred EECHHHHHHHhhhcCC-------------------------------------cc-------------cCCccHHHHHHH
Confidence 8887665444321100 00 122223333444
Q ss_pred hhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCC
Q 006746 428 RRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRG 507 (632)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg 507 (632)
. .++..+...+++...++++...++|.+.|.++... .+.++++.+. ..+
T Consensus 289 ~------------------------~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~----~~g~~~~~~~---~~~ 337 (447)
T 3h7f_A 289 A------------------------VALKIAATPEFADRQRRTLSGARIIADRLMAPDVA----KAGVSVVSGG---TDV 337 (447)
T ss_dssp H------------------------HHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHH----HTTCEEGGGS---CSS
T ss_pred H------------------------HHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhcccc----CCCeEEecCC---CCC
Confidence 3 45554433356777888888888888888764000 0234554321 234
Q ss_pred cEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEE
Q 006746 508 PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVT 587 (632)
Q Consensus 508 ~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VR 587 (632)
..+.+.+.+ ..++...+.+++++.||.++.... ++. .. .....+.||
T Consensus 338 ~~~~~~~~~---~~~~~~~~~~~l~~~GI~v~~~~i--~~~--~~--------------------------~p~~~~~lR 384 (447)
T 3h7f_A 338 HLVLVDLRD---SPLDGQAAEDLLHEVGITVNRNAV--PND--PR--------------------------PPMVTSGLR 384 (447)
T ss_dssp SEEEEECTT---SSCCHHHHHHHHHHTTEECBC-------------------------------------------CEEE
T ss_pred CEEEEEcCC---CCCCHHHHHHHHHHCCeEEecccC--CCC--CC--------------------------CCCCCCcee
Confidence 455555543 125778888999989999873210 000 00 011235799
Q ss_pred EccCCC----CCHHHHHHHHHHHHHhhhh
Q 006746 588 ASLGYL----ANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 588 vSlg~~----~t~eDV~rlv~~l~~~l~~ 612 (632)
+++... .+.+||+++++.|++.|+.
T Consensus 385 ig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 385 IGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp EECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred ccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 998777 4689999999999998765
No 163
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.79 E-value=3.1e-17 Score=178.03 Aligned_cols=313 Identities=14% Similarity=0.072 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHcCCCCCC-------ccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCE
Q 006746 170 GLESAMKKRIMDFLNISEND-------YGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~e-------y~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~ 241 (632)
++.+.+.+.+.+..|.+.++ ..|++|+|+++|+.+++.++ .++||+|++.. .|++ ....++..|++
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~-----~~~~~~~~g~~ 155 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI-INPGDNVLLDEPAYSG-----TLQSLHPLGCN 155 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCHH-----HHHHHGGGTCE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHh-CCCCCEEEEeCCCcHH-----HHHHHHHcCCE
Confidence 34444555555556876421 37999999999999999998 68899977543 4543 24456778999
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCc------CCCceeEEEE-eccCCCCccccchH----HHHHHhhCCcEEEEeccc
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGK------KKKQRGLFVF-PLHSRMTGARYPYL----WMRIAQENDWHILIDACA 310 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~------~~~~~~Lv~~-~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq 310 (632)
++.++.+ +++ +++++|+++++.... ...+++++.+ +..+|+||..+|.+ |+++|+++|+++++|.++
T Consensus 156 ~~~v~~~-~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~ 233 (425)
T 2r2n_A 156 IINVASD-ESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPY 233 (425)
T ss_dssp EEEECEE-TTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred EEEeCcC-CCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999987 343 899999999973110 0124577755 89999999999854 678899999999999987
Q ss_pred cC----CCCCCC-CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCC
Q 006746 311 LG----PKDMDS-FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCE 385 (632)
Q Consensus 311 ~~----g~~m~~-ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~ 385 (632)
.. +....+ ..+...+.++++.|++|.|| +...+|++++++++++.+......
T Consensus 234 ~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~---------------------- 290 (425)
T 2r2n_A 234 YFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQV---------------------- 290 (425)
T ss_dssp GGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHT----------------------
T ss_pred ccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHH----------------------
Confidence 52 321011 12222345799999999998 312379999988765544321000
Q ss_pred CCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHh----h
Q 006746 386 TEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDS----L 461 (632)
Q Consensus 386 ~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~----~ 461 (632)
.. .+.+.+...++. ++|+.+.. .
T Consensus 291 -------------~~----------------~~~~~~~q~a~~------------------------~~l~~~~~~~~~~ 317 (425)
T 2r2n_A 291 -------------ST----------------LHPSTFNQLMIS------------------------QLLHEWGEEGFMA 317 (425)
T ss_dssp -------------TT----------------CSSCHHHHHHHH------------------------HHHHHHHHHHHHH
T ss_pred -------------hc----------------CCCCHHHHHHHH------------------------HHHHhcccchHHH
Confidence 00 001111111121 44443211 1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcE-EEECCCCCCCCCcEEEEEEccCCCCccCH-HHHHHHHHhCCcEEc
Q 006746 462 GLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKIEP-VLVQKLADRENISLS 539 (632)
Q Consensus 462 Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v-~Iygp~~~~~rg~ivaFnv~~~~G~~i~~-~~V~kla~~~gI~lr 539 (632)
-++.+.++.+...++|.+.|.++ .|.+ .+..| ..|..+.+.+.+. .+. +.+.+++.++||.++
T Consensus 318 ~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~~~p----~~g~~~~~~~~~~----~~~~~~~~~~l~~~gv~v~ 382 (425)
T 2r2n_A 318 HVDRVIDFYSNQKDAILAAADKW-------LTGLAEWHVP----AAGMFLWIKVKGI----NDVKELIEEKAVKMGVLML 382 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-------CSSSEEECCC----SBSSEEEEEETTC----SCCHHHHHTHHHHTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------CCCCeEEeCC----CceEEEEEEeCCC----CCHHHHHHHHHHHCCcEEe
Confidence 25666777788888888888874 1333 44444 2355666666542 233 435667778999998
Q ss_pred cCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 540 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 540 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
.|..|... ...+.+.||+|++. .+.+|++++++.|++++...
T Consensus 383 pg~~f~~~-------------------------------~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 383 PGNAFYVD-------------------------------SSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp EGGGGSSS-------------------------------TTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcCC-------------------------------CCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHh
Confidence 77544321 01134689999985 59999999999999987653
No 164
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.78 E-value=1.5e-17 Score=179.91 Aligned_cols=300 Identities=13% Similarity=0.117 Sum_probs=196.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHH--HHHhhCCCC--C---------CCeEEEe-ccccchhhHHHHHHHHhc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFK--LLAESYPFM--S---------VKNLLTV-YDYESEAVEAMIRTSEKR 238 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~--lv~~sl~~~--~---------gd~ilt~-~d~~s~~v~~~~~~a~~~ 238 (632)
.+.|+.|+++++++++ .|++|+|+|+++. +++.++- . + ||+|++. ..|+. ....++..
T Consensus 73 ~~lr~~ia~~~~~~~~--~i~~t~G~~~al~~~~~~~~l~-~~~~g~~~~~~~~gd~Vlv~~p~y~~-----~~~~~~~~ 144 (423)
T 3ez1_A 73 PSARALFAGYLDVKAE--NVLVWNNSSLELQGLVLTFALL-HGVRGSTGPWLSQTPKMIVTVPGYDR-----HFLLLQTL 144 (423)
T ss_dssp HHHHHHHHHHTTSCGG--GEEECSSCHHHHHHHHHHHHHH-TCCTTCSSCGGGGCCEEEEEESCCHH-----HHHHHHHH
T ss_pred HHHHHHHHHHhCCChh--hEEEeCCcHHHHHHHHHHHHHh-ccCCCccccccCCCCEEEEcCCCcHH-----HHHHHHHc
Confidence 4799999999999876 7999999999998 8888762 3 5 5887654 45543 23445678
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEE-EeccCCCCccccchH-H---HHHH-hhCCcEEEEeccccC
Q 006746 239 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFV-FPLHSRMTGARYPYL-W---MRIA-QENDWHILIDACALG 312 (632)
Q Consensus 239 G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~-~~~~sn~TG~~~pl~-i---~~~a-~~~g~~vlvDaaq~~ 312 (632)
|++++.++.+ +++ +++++|++++.+. +++++|. .+..+|+||..+|.+ + +++| +++|+++++|.++..
T Consensus 145 g~~~~~v~~~-~~g-~d~~~l~~~l~~~----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 145 GFELLTVDMQ-SDG-PDVDAVERLAGTD----PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp TCEEEEEEEE-TTE-ECHHHHHHHHHSC----TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSS
T ss_pred CCEEEeccCC-CCC-CCHHHHHHHHhhC----CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcch
Confidence 9999999997 344 8999999999621 2357775 568999999999986 4 4566 889999999998763
Q ss_pred CC----CC-CCCCC-------CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccc
Q 006746 313 PK----DM-DSFGL-------SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDE 380 (632)
Q Consensus 313 g~----~m-~~ldl-------s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~ 380 (632)
.. .. ...++ ...+.++++.|++|.++ +..++|+++.+++.++.+....... .|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~----------~~---- 283 (423)
T 3ez1_A 219 HHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITF-AGAGLGFVASSEDNIRWLSKYLGAQ----------SI---- 283 (423)
T ss_dssp CBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSC-SSSSCEEEEECHHHHHHHHHHHHHS----------CS----
T ss_pred hhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhcc-CCcceEEEEeCHHHHHHHHHHHhhh----------cc----
Confidence 11 00 01111 13456799999999633 2567899988876655443210000 00
Q ss_pred cCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH----
Q 006746 381 FSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD---- 456 (632)
Q Consensus 381 ~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd---- 456 (632)
++ +.+...++. .+|+
T Consensus 284 --------------------~~-----------------~~~~~~a~~------------------------~~l~~~~~ 302 (423)
T 3ez1_A 284 --------------------GP-----------------NKVEQARHV------------------------KFLTEYPG 302 (423)
T ss_dssp --------------------CC-----------------CHHHHHHHH------------------------HHHHHSTT
T ss_pred --------------------CC-----------------CHHHHHHHH------------------------HHHHhccc
Confidence 00 000000000 1111
Q ss_pred ----HHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCC-cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHH
Q 006746 457 ----QVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNA-LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLA 531 (632)
Q Consensus 457 ----~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p-~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla 531 (632)
++.+. .+.+.+|...|.+.|.+.|..+ + .+++..|. .+..+.+.+.+ .+...+.+++
T Consensus 303 ~~~~~~~~~-~~~~~~~~~~l~~~l~~~l~~~--------~~~~~~~~p~----~g~~~~~~~~~-----~~~~~~~~~l 364 (423)
T 3ez1_A 303 GLEGLMRDH-AAIIAPKFRAVDEVLRAELGEG--------GEYATWTLPK----GGYFISLDTAE-----PVADRVVKLA 364 (423)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTT--------TSSEEECCCS----BSSCEEEEESS-----SCHHHHHHHH
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHHHHHhcCcC--------CCceEEeCCC----ccEEEEEECCC-----CcHHHHHHHH
Confidence 12111 2344455555666666666554 3 46666552 45567777765 2567788888
Q ss_pred HhCCcEEcc-CccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhh
Q 006746 532 DRENISLSY-GSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 610 (632)
Q Consensus 532 ~~~gI~lr~-G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l 610 (632)
.++||.++. |.+|..+ .....+.||+|++.. +.+||+++++.|++++
T Consensus 365 ~~~gv~v~~~g~~~~~~-------------------------------~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l 412 (423)
T 3ez1_A 365 EAAGVSLTPAGATYPAG-------------------------------QDPHNRNLRLAPTRP-PVEEVRTAMQVVAACI 412 (423)
T ss_dssp HHTTEECCCTTTTSSTT-------------------------------CCSSSCEEEECCSSS-CHHHHHHHHHHHHHHH
T ss_pred HHCCcEEecCcccccCC-------------------------------CCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHH
Confidence 889999987 5544321 012357999999877 9999999999999988
Q ss_pred hh
Q 006746 611 DA 612 (632)
Q Consensus 611 ~~ 612 (632)
..
T Consensus 413 ~~ 414 (423)
T 3ez1_A 413 RL 414 (423)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 165
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.77 E-value=9.2e-18 Score=180.62 Aligned_cols=307 Identities=12% Similarity=0.089 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHc------CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC-----eEEEe--ccccchhhHHHHHH--HH
Q 006746 172 ESAMKKRIMDFL------NISENDYGMVFTANRTSAFKLLAESYPFMSVK-----NLLTV--YDYESEAVEAMIRT--SE 236 (632)
Q Consensus 172 ~~~~R~~ia~~l------~a~~~ey~vvft~naT~al~lv~~sl~~~~gd-----~ilt~--~d~~s~~v~~~~~~--a~ 236 (632)
+.+.|+.|++++ +++++ .|+||+|+|+|+++++.++ .++|| +|+++ ..|+. ........ ..
T Consensus 77 ~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~t~al~~~~~~l-~~~gd~~~~~~vi~~~~p~~~~-~~~~~~~~~~~~ 152 (417)
T 3g7q_A 77 KTALLNALAVLLRETLGWDIEPQ--NIALTNGSQSAFFYLFNLF-AGRRADGSTKKVLFPLAPEYIG-YADSGLEDDLFV 152 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SBC----CCBEEEESSCCCHHH-HHC-----CCEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc--cEEEeCCcHHHHHHHHHHH-cCCCccCCcceEEEeCCCcccc-chhhccchhhhc
Confidence 357888888887 56655 7999999999999999998 56766 77653 34543 21111100 01
Q ss_pred hcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC
Q 006746 237 KRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG 312 (632)
Q Consensus 237 ~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~ 312 (632)
..+..+..++.+.....+|+++|+ +.+ +++++++++.+|+||..+| ++ |+++|+++|+++++|.++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~ 224 (417)
T 3g7q_A 153 SARPNIELLPEGQFKYHVDFEHLH--IGE------ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGV 224 (417)
T ss_dssp ECCCEEEEEGGGEEEEECCGGGCC--CCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCT
T ss_pred cccCcccccCCcccccccCHHHhc--ccc------CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence 123444444432112356777776 332 4689999999999999999 77 88899999999999999864
Q ss_pred CCC---CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 313 PKD---MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 313 g~~---m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
+.. ...+.....+.++++.|++| ++.+..++|+++.+++.++.+..... .+
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~~~~~~~~~~~------------~~------------- 278 (417)
T 3g7q_A 225 PFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDKTITAIANMNG------------II------------- 278 (417)
T ss_dssp TTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHHHHHHHHHHHH------------HH-------------
T ss_pred ccccccccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHHHHHHHHHhhc------------ce-------------
Confidence 221 01222223467899999999 46322347888776655443322100 00
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHH-----
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLT----- 464 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~----- 464 (632)
.... +.++ .. .+...+....+.
T Consensus 279 ----------~~~~---~~~~-------------~~---------------------------~~~~~l~~~~~~~~~~~ 305 (417)
T 3g7q_A 279 ----------SLAP---GGMG-------------PA---------------------------MMCEMIKRNDLLRLSET 305 (417)
T ss_dssp ----------CCCC---CSHH-------------HH---------------------------HHHHHHHTTCHHHHHHH
T ss_pred ----------eeCC---CcHH-------------HH---------------------------HHHHHHcCcchHHHHHH
Confidence 0000 0000 00 122223222222
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCC--cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCc
Q 006746 465 MISRRGRCLINWLVNALMKLQHPNTEGNA--LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGS 542 (632)
Q Consensus 465 ~I~~r~~~L~~~L~~~L~~l~h~~~~G~p--~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~ 542 (632)
.+.++.+...+.+.+.|.+. .+ .++++.|. .+..+.+.+.+. .++...+.+.+.++||.++.|.
T Consensus 306 ~~~~~~~~~~~~~~~~l~~~-------l~~~~~~~~~~~----~g~~~~~~~~~~---~~~~~~l~~~l~~~gi~v~~g~ 371 (417)
T 3g7q_A 306 VIKPFYYQRVQQTIAIIRRY-------LSEERCLIHKPE----GAIFLWLWFKDL---PITTELLYQRLKARGVLMVPGH 371 (417)
T ss_dssp THHHHHHHHHHHHHHHHHHH-------CCTTTCEEECCC----BSSEEEEECTTC---SSCHHHHHHHHHHTTEECEEGG
T ss_pred HHHHHHHHHHHHHHHHHHHh-------cccCCceeeCCC----cceEEEEEcCCC---CCCHHHHHHHHHHCCEEEECch
Confidence 14455566666677777652 12 25666653 355666666531 1567777777788999999987
Q ss_pred cCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 543 LHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 543 ~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.|..+.... .....+.||+|++. +.+||+++++.|++.+..
T Consensus 372 ~f~~~~~~~---------------------------~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 372 YFFPGLDKP---------------------------WPHTHQCMRMNYVP--EPDKIEAGVKILAEEIER 412 (417)
T ss_dssp GGCTTBSSC---------------------------CGGGGGEEEEESCS--CHHHHHHHHHHHHHHHHH
T ss_pred hhCCCCccc---------------------------cccCCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 766421000 00124699999996 999999999999998764
No 166
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.77 E-value=2e-17 Score=179.36 Aligned_cols=307 Identities=12% Similarity=0.077 Sum_probs=194.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHH--HHHHhhCCC-CC----------CCeEEEe-ccccchhhHHHHHHHHhc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAF--KLLAESYPF-MS----------VKNLLTV-YDYESEAVEAMIRTSEKR 238 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al--~lv~~sl~~-~~----------gd~ilt~-~d~~s~~v~~~~~~a~~~ 238 (632)
.+.|+.|+++++++++ .|++|+|+++++ ++++.++-- .+ ||+|++. ..|++ ....++..
T Consensus 81 ~~lr~~ia~~~~~~~~--~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~-----~~~~~~~~ 153 (427)
T 3ppl_A 81 VDIRQIWADLLGVPVE--QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDR-----HFSITERF 153 (427)
T ss_dssp HHHHHHHHHHHTSCGG--GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHH-----HHHHHHHT
T ss_pred HHHHHHHHHHhCCCcc--eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHH-----HHHHHHHc
Confidence 4799999999999876 799999999999 688877621 13 8887654 34543 23456778
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEE-EeccCCCCccccchH----HHHHH-hhCCcEEEEeccccC
Q 006746 239 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFV-FPLHSRMTGARYPYL----WMRIA-QENDWHILIDACALG 312 (632)
Q Consensus 239 G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~-~~~~sn~TG~~~pl~----i~~~a-~~~g~~vlvDaaq~~ 312 (632)
|++++.+|++ +++ +++++|++++.. .+++++. .|+.+|+||..+|.+ |+++| +++|+++++|.++..
T Consensus 154 g~~~~~v~~~-~~g-~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~ 226 (427)
T 3ppl_A 154 GFEMISVPMN-EDG-PDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAV 226 (427)
T ss_dssp TCEEEEEEEE-TTE-ECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTT
T ss_pred CCEEEEeCCC-CCC-CCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcc
Confidence 9999999998 444 999999998842 1357776 568999999999986 45567 889999999998764
Q ss_pred ----CCCCCCCCCC-------CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccccccccccc
Q 006746 313 ----PKDMDSFGLS-------LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEF 381 (632)
Q Consensus 313 ----g~~m~~ldls-------~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~ 381 (632)
+....++++- ..+.++++.|++|.++ +..++|+++.++++++.+...... ..|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~G~r~G~~~~~~~l~~~~~~~~~~----------~~~----- 290 (427)
T 3ppl_A 227 HTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITL-AGAGVSFFLTSAENRKWYTGHAGI----------RGI----- 290 (427)
T ss_dssp CBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSC-TTSSCEEEECCHHHHHHHHHHHHH----------HCS-----
T ss_pred cccCCCCCCccchhhhhhccCCCCcEEEEechhhccC-cCccEEEEEcCHHHHHHHHHHhhc----------ccC-----
Confidence 1100112221 3456899999999844 245778887776655443221000 000
Q ss_pred CCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchh-hHhhhhhhhhhhhhccCCCCCCCchhhhhHH-HHHH
Q 006746 382 SSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEI-SEVRRAEADSIQQKNANTNGGGGSEIECRGL-DQVD 459 (632)
Q Consensus 382 ~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aL-d~~~ 459 (632)
++..+. ...+ ..+.. ...+ +++.
T Consensus 291 -------------------~~~~~~--------------q~~~~~~l~~----------------------~~~~~~~~~ 315 (427)
T 3ppl_A 291 -------------------GPNKVN--------------QLAHARYFGD----------------------AEGVRAVMR 315 (427)
T ss_dssp -------------------CCCHHH--------------HHHHHHHHCS----------------------HHHHHHHHH
T ss_pred -------------------CCCHHH--------------HHHHHHHHhC----------------------hhhHHHHHH
Confidence 000000 0000 01100 0011 1222
Q ss_pred hhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEc
Q 006746 460 SLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLS 539 (632)
Q Consensus 460 ~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr 539 (632)
+. .+.+.+|...|.+.|.+.|..+ +.+++..|. .+..+.+.+.+ .+...+.+++.++||.++
T Consensus 316 ~~-~~~~~~~~~~l~~~L~~~l~~~--------~~~~~~~p~----~g~~~~~~~~~-----~~~~~~~~~l~~~gv~v~ 377 (427)
T 3ppl_A 316 KH-AASLAPKFNKVLEILDSRLAEY--------GVAQWTVPA----GGYFISLDVVP-----GTASRVAELAKEAGIALT 377 (427)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHGGG--------TCCEECCCS----BSSCEEEECST-----TCHHHHHHHHHHTTEECC
T ss_pred HH-HHHHHHHHHHHHHHHHHhcCCC--------CceEEeCCC----ccEEEEEECCc-----chHHHHHHHHHHCCCEEe
Confidence 21 3444555556666666655544 235555552 35666777665 246677777888999999
Q ss_pred cCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhhc
Q 006746 540 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 613 (632)
Q Consensus 540 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~~ 613 (632)
.|..|-... .....+.||+|++.. +.+||+++++.|++++..-
T Consensus 378 ~~g~~~~~~------------------------------~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 378 GAGSSYPLR------------------------------QDPENKNLRLAPSLP-PVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp CTTTTSGGG------------------------------CCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred cCcCcCCCC------------------------------CCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHH
Confidence 854333210 012357999999877 9999999999999987653
No 167
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.76 E-value=3.6e-17 Score=178.67 Aligned_cols=353 Identities=12% Similarity=0.098 Sum_probs=216.1
Q ss_pred CCceEeecC------CCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYF------GIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~a------g~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|+|.+ ..|+.++.+++++.+.+... + .+. . .+. ..+...+.+++++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~--------~-------------~~~-~-~~~-~~~~~~~l~~~la 103 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTL--------D-------------YSP-G-FQY-GHPLSFQLAEKIT 103 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTC--------S-------------CCC-S-SSC-CCHHHHHHHHHHH
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhC--------C-------------Ccc-c-ccc-CCHHHHHHHHHHH
Confidence 457899985 34555889999987654321 0 000 0 011 2345678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CC------CCCeEEE-eccccchhhHHHHHHH---HhcC-----CEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FM------SVKNLLT-VYDYESEAVEAMIRTS---EKRG-----ARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~------~gd~ilt-~~d~~s~~v~~~~~~a---~~~G-----~~v~~ 244 (632)
++++.+++ .|+||+|+|+|+.+++..+. +. ++++|++ ...||.....++.... .+.+ ..+..
T Consensus 104 ~~~~~~~~--~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 181 (449)
T 3a8u_X 104 DLTPGNLN--HVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDH 181 (449)
T ss_dssp TTSSTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEE
T ss_pred HhCCCCCC--EEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeE
Confidence 99987654 79999999999999988752 11 5678765 5577753333322100 0111 13455
Q ss_pred EeccC--Cc--cccC--------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEe
Q 006746 245 AEFSW--PR--LRIN--------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILID 307 (632)
Q Consensus 245 v~~~~--~~--~~i~--------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvD 307 (632)
++++. .. ..+| +++|+++|++.. ..++++|++..+.+.||.+.| ++ |.++|+++|+++++|
T Consensus 182 v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~D 259 (449)
T 3a8u_X 182 LPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFD 259 (449)
T ss_dssp ECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred ecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEe
Confidence 55431 11 0135 899999997421 124688888888888999999 99 999999999999999
Q ss_pred cccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCc---eEEEEEeCCCccccCCCCCCCceeeccccccccccccc
Q 006746 308 ACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSG---FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEF 381 (632)
Q Consensus 308 aaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G---~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~ 381 (632)
.++. +|.. +..++.-...+|++ ++.|.+| + | +|++++++++++.+.....+ . .+ .
T Consensus 260 ev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~--~-G~~~~G~~~~~~~~~~~l~~~~~~-------~---~~--~-- 320 (449)
T 3a8u_X 260 EVITGFGRTGSMFGADSFGVTPDLM--CIAKQVT--N-GAIPMGAVIASTEIYQTFMNQPTP-------E---YA--V-- 320 (449)
T ss_dssp CTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--T-TSSCCEEEEEEHHHHHHHHTCSSC-------T---TS--C--
T ss_pred ccccCccccCcchhhhhcCCCCCEE--EEccccc--C-CCCceEEEEECHHHHHHhhccCcc-------c---cc--c--
Confidence 9984 5531 11122222357977 4559888 4 5 89999998776655431100 0 00 0
Q ss_pred CCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhh
Q 006746 382 SSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL 461 (632)
Q Consensus 382 ~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~ 461 (632)
.+. ..+| +. .|.....+.. ++|+.+.+.
T Consensus 321 ---~~~-----------~~~t--~~------------~~~~~~aa~~------------------------aal~~~~~~ 348 (449)
T 3a8u_X 321 ---EFP-----------HGYT--YS------------AHPVACAAGL------------------------AALCLLQKE 348 (449)
T ss_dssp ---SSC-----------CCCT--TT------------TCHHHHHHHH------------------------HHHHHHHHT
T ss_pred ---ccc-----------ccCC--Cc------------ccHHHHHHHH------------------------HHHHHHHhc
Confidence 000 0011 10 1112222222 677776652
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCc-cCHHHHHHHHHhCCcEEcc
Q 006746 462 GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-IEPVLVQKLADRENISLSY 540 (632)
Q Consensus 462 Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~-i~~~~V~kla~~~gI~lr~ 540 (632)
.+.+|++.+.+++++.|.++.. .|.+..+ ...|.++.+.+.+..... .++..+.+.+.++||.++.
T Consensus 349 ---~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~~-----~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~ 415 (449)
T 3a8u_X 349 ---NLVQSVAEVAPHFEKALHGIKG-----AKNVIDI-----RNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRF 415 (449)
T ss_dssp ---THHHHHHHHHHHHHHHHHTTTT-----STTEEEE-----EEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEE
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhc-----CCCeEEE-----eeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEec
Confidence 4678899999999999988621 2444221 125778888886421100 0122344444456888763
Q ss_pred CccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 541 GSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 541 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
| + +.||+|+++.+|.+||+++++.|++.++.
T Consensus 416 ~----------------------------------------g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 416 G----------------------------------------G-DTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp E----------------------------------------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred C----------------------------------------C-CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 2 2 58999999999999999999999998754
No 168
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.76 E-value=5.8e-17 Score=180.35 Aligned_cols=315 Identities=11% Similarity=0.042 Sum_probs=195.5
Q ss_pred HHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEe
Q 006746 174 AMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAE 246 (632)
Q Consensus 174 ~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~ 246 (632)
+.|+.|++++ | ++++ .|++|+|+|+|+.+++.++-..+||+|++. ..|++ + ...++..|++++.++
T Consensus 138 ~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~----~-~~~~~~~g~~~~~~~ 210 (500)
T 3tcm_A 138 GLRDAIASGIASRDGFPANAD--DIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPL----Y-SASIALHGGALVPYY 210 (500)
T ss_dssp HHHHHHHHHHHHHHSSCCCGG--GEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTH----H-HHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhhcCCCCCcc--cEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHh----H-HHHHHHcCCEEEEEe
Confidence 5666666665 3 4544 799999999999999999844789997754 45553 2 334567899999999
Q ss_pred ccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEeccccCCC-----CC
Q 006746 247 FSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDACALGPK-----DM 316 (632)
Q Consensus 247 ~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq~~g~-----~m 316 (632)
++.. +..+|+++|+++|++......+++++++.+.+|+||..+|.+ | +++|+++|+++++|.+..... ..
T Consensus 211 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~ 290 (500)
T 3tcm_A 211 LNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKF 290 (500)
T ss_dssp CBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCC
T ss_pred cccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCC
Confidence 8743 347899999999986321122468999999999999999866 5 455999999999999865421 00
Q ss_pred CC-------CCCCCCCC-cEEEEcccccc-CCCCCc--eEEEEE---eCCCccccCCCCCCCceeecccccccccccccC
Q 006746 317 DS-------FGLSLVRP-DFLICSFYQIF-GENPSG--FGCLFV---KKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 317 ~~-------ldls~~~~-Df~~~S~hK~~-G~~P~G--~G~L~V---r~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
.+ ++....++ .+++.|++|.| | +.| +|++++ ++++++.+......
T Consensus 291 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~G~R~G~~~~~~~~~~~~~~l~~~~~~------------------- 349 (500)
T 3tcm_A 291 HSFKKIVRSLGYGEEDLPLVSYQSVSKGYYG--ECGKRGGYFEITGFSAPVREQIYKIASV------------------- 349 (500)
T ss_dssp CCHHHHHHHTTCSSSCCCEEEEEESSSTTTC--CGGGCCEEEEEESCCTTHHHHHHHHHHT-------------------
T ss_pred CcHHHHHHHhccccCCeEEEEEecCCccCCC--CCccceEEEEEeCCCHHHHHHHHHHHhc-------------------
Confidence 01 11101122 26677999977 7 335 588877 55554433211000
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
. .+++.+....+.. .+ .++ ..+ ....+.+.+ -
T Consensus 350 -----------------~----------------~~~~~~~q~~~~~----~l----~~~-~~~-----~~~~~~~~~-~ 381 (500)
T 3tcm_A 350 -----------------N----------------LCSNITGQILASL----VM----NPP-KAS-----DESYASYKA-E 381 (500)
T ss_dssp -----------------T----------------CCCCHHHHHHHHH----HH----SCC-CSS-----STHHHHHHH-H
T ss_pred -----------------c----------------cCCCHHHHHHHHH----Hh----cCc-ccc-----chhHHHHHH-H
Confidence 0 0001111111110 00 000 000 012222222 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEE-EccCCCC-------ccCHH--HHHHHHH
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN-VFDWKRE-------KIEPV--LVQKLAD 532 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFn-v~~~~G~-------~i~~~--~V~kla~ 532 (632)
++.+.++++...++|++.|.++ |.++++.| .++++.|. +..+.+. .+.+. .+.++++
T Consensus 382 ~~~~~~~l~~~~~~l~~~L~~~--------~g~~~~~~-----~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~ 448 (500)
T 3tcm_A 382 KDGILASLARRAKALEHAFNKL--------EGITCNEA-----EGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLE 448 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS--------TTEECCCC-----CBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--------CCcEEecC-----CeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHH
Confidence 5677788888999999999887 66877654 35555442 2211000 01112 2467888
Q ss_pred hCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 533 RENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 533 ~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
++||.+..|..|.. ..+.+.||+|++ ++.+||+++++.|+++++.
T Consensus 449 ~~gI~v~pg~~f~~---------------------------------~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 449 STGIVVVPGSGFGQ---------------------------------VPGTWHFRCTIL--PQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp HHCEECEESTTTCC---------------------------------CTTCCBEEEESC--SCTTTHHHHHHHHHHHHHH
T ss_pred HCCEEEEeCcccCC---------------------------------CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence 88999998865542 113458999999 8999999999999988753
No 169
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.76 E-value=3.6e-16 Score=169.49 Aligned_cols=334 Identities=10% Similarity=0.083 Sum_probs=208.0
Q ss_pred CCceEeecCCCC---CC----CHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIG---LF----SYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRI 179 (632)
Q Consensus 107 ~~~vyLD~ag~g---l~----~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~i 179 (632)
.+..|+|+++.. ++ ++.+++++.+.+..... .++. . | ......+.++++
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~-----------------~~~~--~--~---~~~~~~~l~~~l 95 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAH-----------------AAAN--D--F---YNIPQLELAKKL 95 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCC-----------------CSCS--C--S---CCHHHHHHHHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCcc-----------------cccc--c--c---CCHHHHHHHHHH
Confidence 457899996543 23 78899987664432100 0110 0 1 123456788899
Q ss_pred HHHcCCC-CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHH----HHhcC-----CEEEEEecc
Q 006746 180 MDFLNIS-ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRT----SEKRG-----ARVMSAEFS 248 (632)
Q Consensus 180 a~~l~a~-~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~----a~~~G-----~~v~~v~~~ 248 (632)
++++|.+ ++ .|+||+|+++|+.+++..+...+|++|++. ..||......+... ..+.+ .+++.++.+
T Consensus 96 a~~~~~~~~~--~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 173 (419)
T 2eo5_A 96 VTYSPGNFQK--KVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYP 173 (419)
T ss_dssp HHHSSCSSCE--EEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCC
T ss_pred HHhCCCCcCC--EEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCC
Confidence 9999987 44 799999999999998875421128887654 35665333222110 01112 357777764
Q ss_pred CCccc----------------cCHHHHH-HHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEE
Q 006746 249 WPRLR----------------INSEKLR-KMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILI 306 (632)
Q Consensus 249 ~~~~~----------------i~~~~l~-~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlv 306 (632)
.... ++.++|+ ++|++.. ...++++|++..+.+.||.+.| ++ +.++|+++|+++++
T Consensus 174 -~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~ 251 (419)
T 2eo5_A 174 -NPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVD 251 (419)
T ss_dssp -CSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred -ccccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2211 4578898 8887420 0124678888888888999888 88 99999999999999
Q ss_pred ecccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCCCceeecccccccccccccC
Q 006746 307 DACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFS 382 (632)
Q Consensus 307 Daaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~ 382 (632)
|.++. ++.. +..++.....+|+++ +-|.+|. + .++|+++++++.+ .+ ....+++ |
T Consensus 252 DE~~~~~g~~g~~~~~~~~~~~~d~~t--~sK~~~~-G~~riG~~~~~~~~~-~~-~~~~~~t----------~------ 310 (419)
T 2eo5_A 252 DEVQMGLGRTGKLFAIENFNTVPDVIT--LAKALGG-GIMPIGATIFRKDLD-FK-PGMHSNT----------F------ 310 (419)
T ss_dssp ECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGT-TTSCCEEEEEEGGGC-CC-------C----------C------
T ss_pred eccccCCccCcchhhHHhcCCCCCEEE--ecccccC-CccceEEEEEchHhh-cC-CcccCCC----------C------
Confidence 99987 4421 112233234688775 4597774 4 6789999998876 55 2110000 0
Q ss_pred CCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhC
Q 006746 383 SCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG 462 (632)
Q Consensus 383 ~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~G 462 (632)
. .|.+.+.+.. ++|+.+.+
T Consensus 311 -----------------------~------------~n~~~~~aa~------------------------aal~~~~~-- 329 (419)
T 2eo5_A 311 -----------------------G------------GNALACAIGS------------------------KVIDIVKD-- 329 (419)
T ss_dssp -----------------------C------------CCHHHHHHHH------------------------HHHHHHHH--
T ss_pred -----------------------C------------CCHHHHHHHH------------------------HHHHHHHH--
Confidence 0 0111222222 56665543
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCc
Q 006746 463 LTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGS 542 (632)
Q Consensus 463 l~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~ 542 (632)
+.++++.+.++|.+.|.++ ...++ ..|.++.+.+.. ++ .... +.+.+.++||.++.+
T Consensus 330 ---~~~~~~~~~~~l~~~L~~~-------~~~~~--------~~g~~~~i~~~~-~~--~~~~-~~~~l~~~Gv~v~~~- 386 (419)
T 2eo5_A 330 ---LLPHVNEIGKIFAEELQGL-------ADDVR--------GIGLAWGLEYNE-KK--VRDR-IIGESFKRGLLLLPA- 386 (419)
T ss_dssp ---HHHHHHHHHHHHHHHHTTS-------SSEEE--------EETTEEEEECSC-HH--HHHH-HHHHHHHTTEECEEE-
T ss_pred ---HHHHHHHHHHHHHHHHHHh-------hhheE--------eeeEEEEEEEec-Cc--cHHH-HHHHHHHCCCEEecC-
Confidence 7788999999999998764 01121 246677676521 00 0133 444444789988642
Q ss_pred cCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 543 LHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 543 ~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+.||+|+++.+|.+|++++++.|+++++.
T Consensus 387 ---------------------------------------~~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 387 ---------------------------------------GRSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp ---------------------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1358999999999999999999999988753
No 170
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.75 E-value=4.1e-17 Score=178.46 Aligned_cols=166 Identities=9% Similarity=0.079 Sum_probs=128.7
Q ss_pred cccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEE
Q 006746 164 HGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 164 ~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v 242 (632)
|+.......++.++++++++|.+ ..++++|+++|+.+++.++ .++||+|++. ..|++ ....+...++..|+++
T Consensus 76 y~r~~~p~~~~le~~lA~l~g~~----~~v~~~sG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~-~~~~~~~~~~~~G~~~ 149 (430)
T 3ri6_A 76 YSRSSNPTVEDLEQRLKNLTGAL----GVLALGSGMAAISTAILTL-ARAGDSVVTTDRLFGH-TLSLFQKTLPSFGIEV 149 (430)
T ss_dssp ----CCHHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HHHHHHTHHHHTTCEE
T ss_pred ccCCCCHHHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEcCCCchh-HHHHHHHHHHHcCCEE
Confidence 44334466789999999999985 2566678889999999988 7899998755 45654 3443344667899999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+.++.+ |+++|+++|+++ +++|.+...+|+||...|++ |.++|+++|+++++|.++..|.. .+.
T Consensus 150 ~~v~~~------d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~---~~~ 214 (430)
T 3ri6_A 150 RFVDVM------DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL---LEA 214 (430)
T ss_dssp EEECTT------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT---CCG
T ss_pred EEeCCC------CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc---CCh
Confidence 999764 788999988754 58999999999999999999 99999999999999999988762 334
Q ss_pred CCCCCcEEEEccccccCCCCCceEEEEEe
Q 006746 322 SLVRPDFLICSFYQIFGENPSGFGCLFVK 350 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr 350 (632)
..+++|+++.|++|++|.+..++|.+++.
T Consensus 215 ~~~g~div~~S~sK~l~g~g~~~gG~vv~ 243 (430)
T 3ri6_A 215 KRLGVDIEVLSSTKFISGGGTSVGGVLID 243 (430)
T ss_dssp GGGTCSEEEEECCCEEETTEEECCEEEEE
T ss_pred HHcCCEEEEECCcccccCCCCceEEEEEE
Confidence 45688999999999888311236666663
No 171
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.75 E-value=1.3e-17 Score=182.76 Aligned_cols=171 Identities=12% Similarity=0.077 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCC----CCCe---EEEeccccchhhHHHHHHHHhcCCEEE
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFM----SVKN---LLTVYDYESEAVEAMIRTSEKRGARVM 243 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~----~gd~---ilt~~d~~s~~v~~~~~~a~~~G~~v~ 243 (632)
...+.|++|+++++.+ .|+||+|+|+|+.+++.++ .. +||+ |++...|+. .. ....+..|++++
T Consensus 77 ~~~~l~~~la~~~~~~----~v~~t~ggt~A~~~al~~~-~~~~~~~Gd~~~~viv~~~~~~-~~---~~~~~~~g~~~~ 147 (467)
T 1ax4_A 77 NYYDLKDKAKELFNYD----YIIPAHQGRGAENILFPVL-LKYKQKEGKAKNPVFISNFHFD-TT---AAHVELNGCKAI 147 (467)
T ss_dssp HHHHHHHHHHHHHCCC----EEEEESSHHHHHHHHHHHH-HHHHHHTTCCSSCEEEESSCCH-HH---HHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHcCCC----cEEEcCCcHHHHHHHHHHH-HHhhccCCCccceEEEeccccc-hh---hHHHhccCCcee
Confidence 3468899999999973 6999999999999999887 45 8998 776644433 11 233455788887
Q ss_pred EEeccC---------CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-ccccc---hH-HHHHHhhCCcEEEEecc
Q 006746 244 SAEFSW---------PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYP---YL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 244 ~v~~~~---------~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~p---l~-i~~~a~~~g~~vlvDaa 309 (632)
.++... .++.+|+++|+++|++.. ..++++|++...+|.+ |..+| ++ |.++|+++|+++++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~ 225 (467)
T 1ax4_A 148 NIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSA 225 (467)
T ss_dssp ECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECT
T ss_pred cccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEch
Confidence 765421 135689999999998531 1246999999999999 78766 45 88999999999999998
Q ss_pred ccC-----------CCCCCCCCCCC------CCCcEEEEccccccCCCCCceEEEEEe-C-CCccc
Q 006746 310 ALG-----------PKDMDSFGLSL------VRPDFLICSFYQIFGENPSGFGCLFVK-K-STVPI 356 (632)
Q Consensus 310 q~~-----------g~~m~~ldls~------~~~Df~~~S~hK~~G~~P~G~G~L~Vr-~-~~~~~ 356 (632)
+.. +. ..+++.. ..+|++++|+||.+|. |.| |+++.+ + +.++.
T Consensus 226 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~s~sK~~g~-~~G-g~~~~~d~~~l~~~ 287 (467)
T 1ax4_A 226 RFCENAYFIKARDPKY--KNATIKEVIFDMYKYADALTMSAKKDPLL-NIG-GLVAIRDNEEIFTL 287 (467)
T ss_dssp THHHHHHHHHHHCGGG--TTCCHHHHHHHHGGGCSEEEEETTSTTCC-SSC-EEEEESSCHHHHHH
T ss_pred hhhhcchhcccccccc--CCCchhhhhhhhccccceEEEeccccCCC-Ccc-eEEEeCCHHHHHHH
Confidence 765 22 1222222 2479999999999995 545 666666 4 45443
No 172
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.75 E-value=3.5e-18 Score=184.15 Aligned_cols=204 Identities=12% Similarity=0.067 Sum_probs=140.9
Q ss_pred CCceEeecCCCCCCCHHHHHHHhc-CCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQES-SPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~-~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
..-.|||+.+..+.++.+.+++.+ .+.... . + .|+.. .-..+.|+.|+++++.
T Consensus 35 ~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~---~--------~-------------~y~~~--~g~~~lr~~ia~~~~~ 88 (412)
T 1yaa_A 35 GIGAYRDDNGKPWVLPSVKAAEKLIHNDSSY---N--------H-------------EYLGI--TGLPSLTSNAAKIIFG 88 (412)
T ss_dssp SSCCCBCTTSCBCCCHHHHHHHHHHHTCTTC---C--------C-------------CCCCT--TCCHHHHHHHHHHHHC
T ss_pred eeeeeeCCCCCCCCcHHHHHHHHhhhcCccc---c--------c-------------CCCCC--CCcHHHHHHHHHHHhc
Confidence 456788998888889999998776 543100 0 0 01100 1124788999998842
Q ss_pred ------CCCCccEEE--eCCHHHHHHHHHhhCC-CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec-cCCcccc
Q 006746 186 ------SENDYGMVF--TANRTSAFKLLAESYP-FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF-SWPRLRI 254 (632)
Q Consensus 186 ------~~~ey~vvf--t~naT~al~lv~~sl~-~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~-~~~~~~i 254 (632)
+++ .|+| |+|+|+|+.+++..+. +.+||+|++. ..|++ + ...++..|++++.++. +..++.+
T Consensus 89 ~~~~~~~~~--~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~----~-~~~~~~~g~~~~~v~~~~~~~~~~ 161 (412)
T 1yaa_A 89 TQSDALQED--RVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWAN----H-MAIFENQGLKTATYPYWANETKSL 161 (412)
T ss_dssp TTCHHHHTT--CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTT----H-HHHHHTTTCCEEEEECEETTTTEE
T ss_pred CCCCCCCcc--eEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCcc----H-HHHHHHcCceEEEEeeecCCCCcc
Confidence 444 6999 9999999999843221 3589997654 45654 1 3445678999999998 4335678
Q ss_pred CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC-CCC-----CCCC-CCCC
Q 006746 255 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG-PKD-----MDSF-GLSL 323 (632)
Q Consensus 255 ~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~-g~~-----m~~l-dls~ 323 (632)
++++|++++.+++ ..+.++++++.+|+||..+|.+ |+++|+++|+++++|.++.. ..+ ..++ ++..
T Consensus 162 d~~~l~~~l~~~~---~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 238 (412)
T 1yaa_A 162 DLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVE 238 (412)
T ss_dssp CHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHH
T ss_pred CHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHh
Confidence 9999999997631 1246777799999999998754 67889999999999998743 110 0122 2222
Q ss_pred CC----CcEEEEccccccCCCCCc--eEEEE
Q 006746 324 VR----PDFLICSFYQIFGENPSG--FGCLF 348 (632)
Q Consensus 324 ~~----~Df~~~S~hK~~G~~P~G--~G~L~ 348 (632)
.. .++++.|++|.|| |.| +|+++
T Consensus 239 ~~~~~~~~i~~~s~sK~~~--~~GlriG~~~ 267 (412)
T 1yaa_A 239 KLSTVSPVFVCQSFAKNAG--MYGERVGCFH 267 (412)
T ss_dssp HTTTTCCEEEEEECTTTSC--CGGGCEEEEE
T ss_pred cCCCCcceEEEeccCCCCC--CcCCcceEEE
Confidence 23 3688999999999 778 59888
No 173
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.75 E-value=2.8e-16 Score=168.32 Aligned_cols=330 Identities=12% Similarity=0.097 Sum_probs=208.1
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||+++. |.-++.+++++.+.+..... . .+ . ...+..++.+++++
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-------~----------~~---~-----~~~~~~~~l~~~la 88 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLH-------T----------SN---L-----YYNENIAAAAKNLA 88 (395)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSC-------C----------CT---T-----SBCHHHHHHHHHHH
T ss_pred CCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccc-------c----------cc---c-----cCCHHHHHHHHHHH
Confidence 45779998765 33478888887654432100 0 00 0 02356678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C-----CCCCeEEE-eccccchhhHHHH--------HHHHhcCCEEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F-----MSVKNLLT-VYDYESEAVEAMI--------RTSEKRGARVMSA 245 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~-----~~gd~ilt-~~d~~s~~v~~~~--------~~a~~~G~~v~~v 245 (632)
++++. + .|+||+|+|+|+.+++..+. . .++++|++ ...||......+. ......+.++..+
T Consensus 89 ~~~~~--~--~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (395)
T 3nx3_A 89 KASAL--E--RVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFA 164 (395)
T ss_dssp HHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEE
T ss_pred HhcCC--C--eEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEe
Confidence 99983 3 69999999999999887652 1 34677664 4566653222211 0001123455555
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc-CCCC--CC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL-GPKD--MD 317 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~g~~--m~ 317 (632)
+.+ |+++|+++|+++ ++++++..+.+.+|.+.| ++ |.++|+++|+++++|.++. ++.. +.
T Consensus 165 ~~~------d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~ 232 (395)
T 3nx3_A 165 KYN------DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF 232 (395)
T ss_dssp CTT------CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS
T ss_pred CCC------CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch
Confidence 542 678888877643 588888889999999988 99 9999999999999999987 3321 11
Q ss_pred CCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCC-ccccCCCCCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 318 SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKST-VPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 318 ~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~-~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
..+.....+|++++| |.+|. +.++|+++++++. ++.+.+...+++ |.
T Consensus 233 ~~~~~~~~~d~~t~s--K~~~~-G~~~G~~~~~~~~~~~~~~~~~~~~~----------~~------------------- 280 (395)
T 3nx3_A 233 AYEHAQILPDIMTSA--KALGC-GLSVGAFVINQKVASNSLEAGDHGST----------YG------------------- 280 (395)
T ss_dssp GGGGGTCCCSEEEEC--GGGTT-TSCCEEEEECHHHHHHHSCTTCCSSC----------BS-------------------
T ss_pred hHHhcCCCCCEEEec--ccccC-CCceEEEEEchhhhhhhcCCcccCCC----------CC-------------------
Confidence 122223457887766 97764 5578999999887 665654322111 00
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
.|.....+. .++|+.+.. +.+.++.+.+.++
T Consensus 281 ----------------------~~~~~~~aa------------------------~aal~~~~~---~~~~~~~~~~~~~ 311 (395)
T 3nx3_A 281 ----------------------GNPLVCAGV------------------------NAVFEIFKE---EKILENVNKLTPY 311 (395)
T ss_dssp ----------------------CCHHHHHHH------------------------HHHHHHHHH---TTHHHHHHHHHHH
T ss_pred ----------------------CCHHHHHHH------------------------HHHHHHHHh---hHHHHHHHHHHHH
Confidence 000111111 156665543 3445566666666
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhh
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 556 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~ 556 (632)
+++.|.++.. ..|.+... ...+.++.|.+.+. .+...+.+.+.++||.++.|
T Consensus 312 ~~~~l~~~~~----~~~~~~~~-----~~~g~~~~~~~~~~----~~~~~~~~~l~~~Gi~v~~~--------------- 363 (395)
T 3nx3_A 312 LEQSLDELIN----EFDFCKKR-----KGLGFMQGLSLDKS----VKVAKVIQKCQENALLLISC--------------- 363 (395)
T ss_dssp HHHHHHHHHH----HCTTEEEE-----EEETTEEEEEECTT----SCHHHHHHHHHHTTEECEEE---------------
T ss_pred HHHHHHHHHH----hCCCeEEE-----EeEEEEEEEEeCCc----chHHHHHHHHHHCCCEEecC---------------
Confidence 6666655410 01334322 12477888887652 24556666666789988643
Q ss_pred hhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 557 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 557 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+.+.||+|+++..|.+|++++++.|+++++
T Consensus 364 -------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 364 -------------------------GENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp -------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 235999999999999999999999999875
No 174
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.75 E-value=9.2e-17 Score=174.44 Aligned_cols=333 Identities=9% Similarity=0.068 Sum_probs=208.5
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|||.++. |..++.+++++.+.+... + +.+.. | ..+..++.+++++
T Consensus 55 ~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~--------~------------~~~~~--~---~~~~~~~l~~~la 109 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGHCHPALVEALKSQGETL--------W------------HTSNV--F---TNEPALRLGRKLI 109 (420)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTC--------C------------CCCTT--S---CCHHHHHHHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhc--------c------------cccCc--c---CCHHHHHHHHHHH
Confidence 56789999654 455788888876644321 0 00000 1 2356678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC------CCCC-eEEE-eccccchhhHHHHHHH---HhcCC-----EEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF------MSVK-NLLT-VYDYESEAVEAMIRTS---EKRGA-----RVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~------~~gd-~ilt-~~d~~s~~v~~~~~~a---~~~G~-----~v~~ 244 (632)
+++|. + .|+||+|+|+|+.+++..+.- .+|+ +|++ ...||.....++.... .+.+. .+..
T Consensus 110 ~~~g~--~--~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~ 185 (420)
T 2pb2_A 110 DATFA--E--RVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIH 185 (420)
T ss_dssp HHSSC--S--EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEE
T ss_pred hhCCC--C--eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEE
Confidence 99984 2 699999999999999887621 0564 6664 4567753333321100 01111 2555
Q ss_pred EeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcc----ccchH-HHHHHhhCCcEEEEeccccC-CCC--C
Q 006746 245 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA----RYPYL-WMRIAQENDWHILIDACALG-PKD--M 316 (632)
Q Consensus 245 v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~----~~pl~-i~~~a~~~g~~vlvDaaq~~-g~~--m 316 (632)
++. .|+++|+++|+++ +++|++..+++.+|. .-+++ |.++|+++|+++++|.++.. +.. +
T Consensus 186 ~~~------~d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~ 253 (420)
T 2pb2_A 186 VPF------NDLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDL 253 (420)
T ss_dssp ECT------TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred ecC------CCHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcH
Confidence 543 2788999888643 588999888888886 34677 88999999999999999852 211 0
Q ss_pred CCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhh
Q 006746 317 DSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 396 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 396 (632)
..++.....+|++ ++.|.+|. +..+|++++++++++.+.+...+++ |
T Consensus 254 ~~~~~~~~~~dii--t~sK~l~~-G~~iG~~~~~~~l~~~l~~~~~~~t----------~-------------------- 300 (420)
T 2pb2_A 254 FAYMHYGVTPDIL--TSAKALGG-GFPVSAMLTTQEIASAFHVGSHGST----------Y-------------------- 300 (420)
T ss_dssp SHHHHHTCCCSEE--EECGGGGT-TSCCEEEEECHHHHTTCC----CCE----------E--------------------
T ss_pred HHHHhcCCCCCeE--EecccccC-CCceEEEEEhHHHHHhhcCCCcCcc----------c--------------------
Confidence 1112223468987 46798872 3459999999876655543111100 0
Q ss_pred hhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHH
Q 006746 397 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 476 (632)
Q Consensus 397 e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~ 476 (632)
. .|.....+.. ++|+.+.+ +.+.++.+.+.++
T Consensus 301 ---------~------------~~~~~~aa~~------------------------a~L~~~~~---~~~~~~~~~~~~~ 332 (420)
T 2pb2_A 301 ---------G------------GNPLACAVAG------------------------AAFDIINT---PEVLQGIHTKRQQ 332 (420)
T ss_dssp ---------C------------CCHHHHHHHH------------------------HHHHHHSS---HHHHHHHHHHHHH
T ss_pred ---------C------------cCHHHHHHHH------------------------HHHHHHHh---ccHHHHHHHHHHH
Confidence 0 0000111111 45655543 5678889999999
Q ss_pred HHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhh
Q 006746 477 LVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 556 (632)
Q Consensus 477 L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~ 556 (632)
|.+.|.++.. +.|.+.... ..|.++.|.+.+..+ .+...+.+.+.++||.++.|
T Consensus 333 l~~~L~~~~~----~~~~~~~~~-----~~g~~~~v~~~~~~~--~~~~~l~~~l~~~Gi~v~~~--------------- 386 (420)
T 2pb2_A 333 FVQHLQAIDE----QFDIFSDIR-----GMGLLIGAELKPKYK--GRARDFLYAGAEAGVMVLNA--------------- 386 (420)
T ss_dssp HHHHHHHHHH----HHCCEEEEE-----EETTEEEEEECGGGT--TCHHHHHHHHHHTTEECEES---------------
T ss_pred HHHHHHHHHh----cCCCeEEEE-----ecceEEEEEECCCch--HHHHHHHHHHHHCCCEEEeC---------------
Confidence 9999987610 013333221 247788887764211 13455555555589887643
Q ss_pred hhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 557 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 557 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+.||+|+++..|.|||+++++.|+++++.
T Consensus 387 -------------------------~~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 387 -------------------------GADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp -------------------------STTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1358999999999999999999999998753
No 175
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.75 E-value=2.9e-16 Score=170.30 Aligned_cols=169 Identities=14% Similarity=0.175 Sum_probs=121.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHH--HHHHhhCC--CCC---------CCeEEE-eccccchhhHHHHHHHHhc
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAF--KLLAESYP--FMS---------VKNLLT-VYDYESEAVEAMIRTSEKR 238 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al--~lv~~sl~--~~~---------gd~ilt-~~d~~s~~v~~~~~~a~~~ 238 (632)
.+.|+.|+++++++++ .|++|+|+++++ .+++..+. +.+ +++|++ ...|+. ....++..
T Consensus 79 ~~lr~~ia~~~~~~~~--~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~-----~~~~~~~~ 151 (422)
T 3d6k_A 79 ADIRELWAEALGLPAD--LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDR-----HFTITEHF 151 (422)
T ss_dssp HHHHHHHHHHHTCCGG--GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHH-----HHHHHHHH
T ss_pred HHHHHHHHHHhCCChh--HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHH-----HHHHHHHc
Confidence 4799999999999876 799999999997 78877762 112 336654 345553 23445678
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEE-EeccCCCCccccchH----HHHHHh-hCCcEEEEeccccC
Q 006746 239 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFV-FPLHSRMTGARYPYL----WMRIAQ-ENDWHILIDACALG 312 (632)
Q Consensus 239 G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~-~~~~sn~TG~~~pl~----i~~~a~-~~g~~vlvDaaq~~ 312 (632)
|++++.++.+ +++ +++++|++++++. +++++. ++..+|+||..+|.+ |+++|+ ++|+++++|.++..
T Consensus 152 g~~~~~v~~~-~~g-~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~ 224 (422)
T 3d6k_A 152 GFEMINVPMT-DEG-PDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYAL 224 (422)
T ss_dssp TCEEEEEEEE-TTE-ECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTT
T ss_pred CCEEEecCCC-CCC-CCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccc
Confidence 9999999997 344 8999999998642 257776 799999999999986 456677 89999999999863
Q ss_pred ---CCC---CCCC-C----CCCCCCcEEEEccccccCCCC-CceEEEEEeCCCcccc
Q 006746 313 ---PKD---MDSF-G----LSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPIL 357 (632)
Q Consensus 313 ---g~~---m~~l-d----ls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L 357 (632)
..+ ..++ + +...+.++++.|+.|+.+ | ..+|+++++++.++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~--~GlriG~~~~~~~l~~~l 279 (422)
T 3d6k_A 225 HTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITH--AGSGVSFFASSKENIEWY 279 (422)
T ss_dssp CBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSC--TTSSCEEEECCHHHHHHH
T ss_pred cccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcC--cccceEEEEeCHHHHHHH
Confidence 110 0122 1 123456899999999843 4 2489999887665444
No 176
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.75 E-value=4e-16 Score=170.66 Aligned_cols=330 Identities=10% Similarity=0.073 Sum_probs=210.5
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|+|+++. |-.++.+++++.+.+... + +.+.. | ..+...+.+++++
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~--------~------------~~~~~--~---~~~~~~~l~~~la 128 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKL--------T------------LTSRA--F---YNNVLGEYEEYIT 128 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTC--------S------------CCCTT--S---EESSHHHHHHHHH
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhc--------C------------cccCc--c---CCHHHHHHHHHHH
Confidence 56789998762 225688888876544321 0 00000 1 1234567889999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC--------CCCC-CeEEE-eccccchhhHHHHHHHH----hcC-----CE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP--------FMSV-KNLLT-VYDYESEAVEAMIRTSE----KRG-----AR 241 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~--------~~~g-d~ilt-~~d~~s~~v~~~~~~a~----~~G-----~~ 241 (632)
+++|. + .|+||+|+|+|+.+++..+. ..+| ++|++ ...||......+. ... +.| ..
T Consensus 129 ~~~g~--~--~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~-~~g~~~~~~~~~p~~~~ 203 (439)
T 2oat_A 129 KLFNY--H--KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAIS-SSTDPTSYDGFGPFMPG 203 (439)
T ss_dssp HHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHT-TCCCHHHHTTSCSCCTT
T ss_pred HhcCC--C--EEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhh-cCCChhcccCCCCCCCC
Confidence 99974 2 69999999999999887752 1356 67664 4467753333321 100 111 45
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc----chH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY----PYL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~----pl~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
+..+|. .|+++|+++|.. .++++|++..+.+.+|... +++ +.++|+++|+++++|.+|.. +..
T Consensus 204 v~~~~~------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~ 272 (439)
T 2oat_A 204 FDIIPY------NDLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLART 272 (439)
T ss_dssp EEEECS------SCHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred eEEeCC------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccC
Confidence 666654 278899998852 1358888888888899887 799 99999999999999999852 221
Q ss_pred --CCCCCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 316 --MDSFGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 316 --m~~ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
+..++.....+|++ ++.|.+|. . ..+|+++++++.++.+.+...++
T Consensus 273 g~~~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~~---------------------------- 321 (439)
T 2oat_A 273 GRWLAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCDDDIMLTIKPGEHGS---------------------------- 321 (439)
T ss_dssp SSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTSCTTSSCC----------------------------
T ss_pred CcchhHHHhCCCCcEE--EecccccC-CCCCeEEEEECHHHHhccCCCCccc----------------------------
Confidence 11122223468977 66698882 1 13899999988766554311110
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRC 472 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~ 472 (632)
| |. .|.....+.. ++|+.+.+. .+.+|.+.
T Consensus 322 ---------t--~~------------~~~~~~aaa~------------------------aal~~~~~~---~~~~~~~~ 351 (439)
T 2oat_A 322 ---------T--YG------------GNPLGCRVAI------------------------AALEVLEEE---NLAENADK 351 (439)
T ss_dssp ---------S--ST------------TCHHHHHHHH------------------------HHHHHHHHT---THHHHHHH
T ss_pred ---------C--CC------------cCHHHHHHHH------------------------HHHHHHhhh---hHHHHHHH
Confidence 0 00 0001111111 567766552 56788999
Q ss_pred HHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHH
Q 006746 473 LINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKY 552 (632)
Q Consensus 473 L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~ 552 (632)
+.++|++.|.++. .+.+... ...|.++.+.+.+..+ .+...+.+.+.++||.++.+
T Consensus 352 ~~~~l~~~L~~l~------~~~~~~~-----~~~g~~~~v~l~~~~~--~~~~~l~~~l~~~Gv~v~~~----------- 407 (439)
T 2oat_A 352 LGIILRNELMKLP------SDVVTAV-----RGKGLLNAIVIKETKD--WDAWKVCLRLRDNGLLAKPT----------- 407 (439)
T ss_dssp HHHHHHHHHTTSC------TTTEEEE-----EEETTEEEEEECCCSS--CCHHHHHHHHHHTTEECCBS-----------
T ss_pred HHHHHHHHHHHhc------CCCcEEE-----EeeeeEEEEEEecCcc--HHHHHHHHHHHHCCeEEecC-----------
Confidence 9999999999883 3444221 1257788887765211 24455555555679887631
Q ss_pred HHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 553 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 553 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+.++||+++++..|.+||+++++.|++.++
T Consensus 408 -----------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 408 -----------------------------HGDIIRFAPPLVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp -----------------------------SSSEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCCEEEEECccCCCHHHHHHHHHHHHHHHH
Confidence 235899999999999999999999998875
No 177
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.75 E-value=1.5e-17 Score=182.17 Aligned_cols=167 Identities=15% Similarity=0.132 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCC-----C----CeEEEeccccchhhHHHHHHHHhcCCE
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMS-----V----KNLLTVYDYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~-----g----d~ilt~~d~~s~~v~~~~~~a~~~G~~ 241 (632)
...+.|++++++++.+ .++||+|+|+|+.+++.++ ..+ | |+|++...|.. .... .....|+.
T Consensus 75 ~~~~l~~~la~~~~~~----~v~~t~~gt~A~~~al~~~-~~~~~~~~G~~~~d~Ii~~~~h~~-t~~~---~~~~~~~~ 145 (467)
T 2oqx_A 75 SYYALAESVKNIFGYQ----YTIPTHQGRGAEQIYIPVL-IKKREQEKGLDRSKMVAFSNYFFD-TTQG---HSQINGCT 145 (467)
T ss_dssp HHHHHHHHHHHHHCCS----EEEEEC--CCSHHHHHHHH-HHHHHHHHCCCTTTCEEEESSCCH-HHHH---HHHHTTCE
T ss_pred hhHHHHHHHHHHhCcC----cEEEcCCcHHHHHHHHHHH-hccccccCCCCccceEEecccccc-cchh---hhhccCcc
Confidence 3457899999999973 6999999999999998887 455 7 88776644433 1111 22345666
Q ss_pred EEEEec----cC-----CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-ccccc---hH-HHHHHhhCCcEEEEe
Q 006746 242 VMSAEF----SW-----PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYP---YL-WMRIAQENDWHILID 307 (632)
Q Consensus 242 v~~v~~----~~-----~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~p---l~-i~~~a~~~g~~vlvD 307 (632)
+..... +. .++.+|+++|+++|++.. ..++++|++.+.+|.+ |..+| ++ |.++|+++|+++++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 223 (467)
T 2oqx_A 146 VRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMD 223 (467)
T ss_dssp EEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred eeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 554311 10 235689999999998521 1236899999999998 77765 56 889999999999999
Q ss_pred ccccC-----------CCCCCCCCCCC------CCCcEEEEccccccCCCCCceEEEEEeCC
Q 006746 308 ACALG-----------PKDMDSFGLSL------VRPDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 308 aaq~~-----------g~~m~~ldls~------~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
++|.. +. ...++.. ..+|++++|+||.+|. |.| |+++.+++
T Consensus 224 ~a~~~e~~~~~~~~~~~~--~g~~~~~~~~~~~~~~d~~~~s~sK~~g~-~~G-g~~~~~~~ 281 (467)
T 2oqx_A 224 SARFAENAYFIKQREAEY--KDWTIEQITRETYKYADMLAMSAKKDAMV-PMG-GLLCMKDD 281 (467)
T ss_dssp CTTHHHHHHHHHHHCGGG--TTSCHHHHHHHHGGGCSEEEEESSSTTCC-SSC-EEEEECSG
T ss_pred chhhhhhhhhcccccccc--cCccHHHHhhhhhccCCeEEEecccccCC-CCc-eEEEecCh
Confidence 88765 22 1222221 2479999999999995 645 66666666
No 178
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.74 E-value=6.3e-16 Score=168.70 Aligned_cols=330 Identities=8% Similarity=0.064 Sum_probs=204.6
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||+++ .|..++.+++++.+.+... + +.+.. | ..+...+.+++++
T Consensus 63 ~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~--------~------------~~~~~--~---~~~~~~~l~~~la 117 (433)
T 1z7d_A 63 NDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNL--------T------------ICSRA--F---FSVPLGICERYLT 117 (433)
T ss_dssp TCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTC--------S------------CCCTT--S---EEHHHHHHHHHHH
T ss_pred CCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhC--------C------------CccCC--c---CCHHHHHHHHHHH
Confidence 5678999766 2225678888876644321 0 00000 1 2355678889999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC--------CCCC-CeEEEe-ccccchhhHHHHHHHH----hcC-----CE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP--------FMSV-KNLLTV-YDYESEAVEAMIRTSE----KRG-----AR 241 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~--------~~~g-d~ilt~-~d~~s~~v~~~~~~a~----~~G-----~~ 241 (632)
++++. + .|+||+|+|+|+.+++..+. ..+| ++|++. ..||.....++. ... +.+ ..
T Consensus 118 ~~~g~--~--~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~-~~g~~~~~~~~~p~~~~ 192 (433)
T 1z7d_A 118 NLLGY--D--KVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCIS-ASTTKKCTSNFGPFAPQ 192 (433)
T ss_dssp HHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------C
T ss_pred hhcCC--C--eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhc-ccCCccccccCCCCCCC
Confidence 99984 2 69999999999999887642 2357 777654 467653222221 111 011 24
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc----chH-HHHHHhhCCcEEEEeccccC-CCC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY----PYL-WMRIAQENDWHILIDACALG-PKD 315 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~----pl~-i~~~a~~~g~~vlvDaaq~~-g~~ 315 (632)
+..+|. .|+++|+++|.. .++++|++..+.+.+|... +++ |.++|+++|+++++|.+|.. +..
T Consensus 193 v~~~~~------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~ 261 (433)
T 1z7d_A 193 FSKVPY------DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRT 261 (433)
T ss_dssp EEEECT------TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred eEEeCC------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcC
Confidence 444443 278999999952 1358888888888899987 788 99999999999999999862 221
Q ss_pred --CCCCCCCCCCCcEEEEccccccCCCCCc---eEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccc
Q 006746 316 --MDSFGLSLVRPDFLICSFYQIFGENPSG---FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 316 --m~~ldls~~~~Df~~~S~hK~~G~~P~G---~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
+..++.....+|++ ++.|.+| + | +|++++++++++.+.+...+++
T Consensus 262 g~~~~~~~~~~~~di~--t~sK~l~--~-G~~~~G~v~~~~~~~~~l~~~~~~~t------------------------- 311 (433)
T 1z7d_A 262 GKLLCVHHYNVKPDVI--LLGKALS--G-GHYPISAVLANDDIMLVIKPGEHGST------------------------- 311 (433)
T ss_dssp SSSSGGGGGTCCCSEE--EECGGGG--T-TSSCCEEEEECHHHHTTCCTTCCCCT-------------------------
T ss_pred CcchhhHhcCCCCCEE--EECcccc--C-CCCCeEEEEECHHHHhhhcccccccc-------------------------
Confidence 11122223468987 5569888 3 5 8999999887665543211100
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 470 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~ 470 (632)
|. .|.....+. .++|+.+.+. .+.++.
T Consensus 312 --------------~~------------~~~~~~aaa------------------------~aal~~~~~~---~~~~~~ 338 (433)
T 1z7d_A 312 --------------YG------------GNPLAASIC------------------------VEALNVLINE---KLCENA 338 (433)
T ss_dssp --------------TT------------TCHHHHHHH------------------------HHHHHHHHHT---THHHHH
T ss_pred --------------CC------------CCHHHHHHH------------------------HHHHHHHHhc---cHHHHH
Confidence 00 001111111 1567766542 467788
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHh
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~ 550 (632)
+.+.++|++.|.++.. +.|.+... ...|.++.+.+.+.+ .+...+.+.+.++||.++.+
T Consensus 339 ~~~~~~l~~~L~~l~~----~~~~~~~~-----~~~g~~~~i~~~~~~---~~~~~~~~~l~~~Gv~v~~~--------- 397 (433)
T 1z7d_A 339 EKLGGPFLENLKRELK----DSKIVRDV-----RGKGLLCAIEFKNEL---VNVLDICLKLKENGLITRDV--------- 397 (433)
T ss_dssp HHHHHHHHHHHHHHHT----TCTTEEEE-----EEETTEEEEEECTTT---CCHHHHHHHHHHTTEECCEE---------
T ss_pred HHHHHHHHHHHHHHHH----hCCCeEEE-----EeeeeEEEEEEccCh---hHHHHHHHHHHHCCeEEecC---------
Confidence 8999999999988721 12433221 125778888776421 23455555555679887632
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.++||+++++..|.|||+++++.|+++++.
T Consensus 398 -------------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 398 -------------------------------HDKTIRLTPPLCITKEQLDECTEIIVKTVKF 428 (433)
T ss_dssp -------------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 1358999999999999999999999998754
No 179
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.73 E-value=9.5e-17 Score=174.16 Aligned_cols=297 Identities=12% Similarity=0.092 Sum_probs=183.1
Q ss_pred HHHHHHHHHHc----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEE-eccccchhhHHHHHHHHhcC--------
Q 006746 173 SAMKKRIMDFL----NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLT-VYDYESEAVEAMIRTSEKRG-------- 239 (632)
Q Consensus 173 ~~~R~~ia~~l----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G-------- 239 (632)
.+.|+.|++++ +++++ .|+||+|+++++.++ ..+ +++||+|++ ...|++ .... ...+...|
T Consensus 101 ~~l~~~ia~~~~~~~~~~~~--~i~~t~G~~~al~~l-~~l-~~~gd~Vl~~~p~y~~-~~~~-~~~~g~~~~~~~~~~~ 174 (432)
T 3ei9_A 101 KPLRAAIAKTFYGGLGIGDD--DVFVSDGAKCDISRL-QVM-FGSNVTIAVQDPSYPA-YVDS-SVIMGQTGQFNTDVQK 174 (432)
T ss_dssp HHHHHHHHHHHHTTTTCCGG--GEEEESCHHHHHHHH-HHH-HCTTCCEEEEESCCTH-HHHH-HHHHTCSCCEETTTTE
T ss_pred HHHHHHHHHHHHccCCCCcc--eEEECCChHHHHHHH-HHH-cCCCCEEEEeCCCCHH-HHHH-HHHcCCcccccccccc
Confidence 46788888886 77765 799999999999986 444 578999765 456664 3322 23333333
Q ss_pred -CEEEEEeccCCcc-ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC-
Q 006746 240 -ARVMSAEFSWPRL-RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG- 312 (632)
Q Consensus 240 -~~v~~v~~~~~~~-~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~- 312 (632)
.+++.++.+...+ ..+++ . .+++++++++..+|+||..+|.+ |+++|+++|+++++|.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~l~-------~----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~ 243 (432)
T 3ei9_A 175 YGNIEYMRCTPENGFFPDLS-------T----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMY 243 (432)
T ss_dssp ETTCEEEECCGGGTTSCCGG-------G----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG
T ss_pred cCceEEeccCcccCCcCChh-------h----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhh
Confidence 3677888763221 22221 1 12468999999999999999755 55669999999999999873
Q ss_pred --CCCCCCCCCC----CCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCC
Q 006746 313 --PKDMDSFGLS----LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCET 386 (632)
Q Consensus 313 --g~~m~~ldls----~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~ 386 (632)
+. .+..+. ..+.++++.|++|.||.+...+|+++++++.+..-.... . ..|.
T Consensus 244 ~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~----~-------~~~~--------- 301 (432)
T 3ei9_A 244 MSDD--NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPV----A-------KDFN--------- 301 (432)
T ss_dssp CCSS--CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBH----H-------HHHH---------
T ss_pred ccCC--CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHH----H-------HHHH---------
Confidence 21 122221 135679999999999842223799998887631100000 0 0000
Q ss_pred CccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHH
Q 006746 387 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 466 (632)
Q Consensus 387 e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I 466 (632)
.. ...+ + ++.+.+...+.. .+|.......++.+
T Consensus 302 -------~~---~~~~--~-----------~~~~~~~~~a~~------------------------~~l~~~~~~~~~~~ 334 (432)
T 3ei9_A 302 -------RI---ICTC--F-----------NGASNISQAGAL------------------------ACLTPEGLEAMHKV 334 (432)
T ss_dssp -------HH---HHHS--C-----------CCSCHHHHHHHH------------------------HHSSHHHHHHHHHH
T ss_pred -------HH---hccc--c-----------CCCCHHHHHHHH------------------------HHHhcccHHHHHHH
Confidence 00 0000 0 001111111111 23321111135777
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCH-HHHHHHHHhCCcEEccCccCC
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEP-VLVQKLADRENISLSYGSLHH 545 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~-~~V~kla~~~gI~lr~G~~c~ 545 (632)
.++++.+.+++++.|.++ | +++++|. .+..+.+.+.+ .+. +.++++++++||.++.|..|.
T Consensus 335 ~~~~~~~~~~l~~~L~~~------g---~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~ll~~~gv~v~~g~~f~ 396 (432)
T 3ei9_A 335 IGFYKENTNIIIDTFTSL------G---YDVYGGK----NAPYVWVHFPN-----QSSWDVFAEILEKTHVVTTPGSGFG 396 (432)
T ss_dssp HHHHHHHHHHHHHHHHHT------T---CCEEECS----SSSEEEEECTT-----SCHHHHHHHHHHHHCEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHHHHC------C---ceecCCC----cceEEEEECCC-----CCHHHHHHHHHHHCCEEEeCchHhC
Confidence 888899999999999887 4 3455442 45667777663 344 455677888899998875443
Q ss_pred hHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 546 IWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 546 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
+ .+.+.||+|+ .++.+||+..++.|++-
T Consensus 397 ~----------------------------------~~~~~iRis~--~~~~e~l~~~l~rl~~~ 424 (432)
T 3ei9_A 397 P----------------------------------GGEGFVRVSA--FGHRENILEACRRFKQL 424 (432)
T ss_dssp G----------------------------------GGTTEEEEEC--CSCHHHHHHHHHHHHHH
T ss_pred C----------------------------------CCCCEEEEEe--cCCHHHHHHHHHHHHHH
Confidence 2 1346999996 67999999999988753
No 180
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.73 E-value=1.1e-16 Score=175.49 Aligned_cols=304 Identities=12% Similarity=0.027 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHcC-CCCCCccEEEeCCHHHHHHHHHhhCC-C-C-----------CCCeEEEe-ccccchhhHHHHHH
Q 006746 170 GLESAMKKRIMDFLN-ISENDYGMVFTANRTSAFKLLAESYP-F-M-----------SVKNLLTV-YDYESEAVEAMIRT 234 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~-a~~~ey~vvft~naT~al~lv~~sl~-~-~-----------~gd~ilt~-~d~~s~~v~~~~~~ 234 (632)
+...+.+++++++++ .+++ .|+||+|+|+|++.++.... + . +|++|++. ..||.....++.-.
T Consensus 101 ~~~~~la~~la~~~~~~~~~--~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~ 178 (449)
T 2cjg_A 101 VAMARFVETFARVLGDPALP--HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLT 178 (449)
T ss_dssp HHHHHHHHHHHHHHCCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTC
T ss_pred HHHHHHHHHHHHhcCCCCCC--EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhc
Confidence 455688889999997 3433 79999999999999876431 1 1 27787754 46775333222100
Q ss_pred ----HHhcCC-----EEEEEeccC--Ccc-------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH
Q 006746 235 ----SEKRGA-----RVMSAEFSW--PRL-------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL 292 (632)
Q Consensus 235 ----a~~~G~-----~v~~v~~~~--~~~-------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~ 292 (632)
..+.|. .+..+|.+. ... .+++++|+++|.+.. .++++|++..++|.+|.+.| ++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~ 255 (449)
T 2cjg_A 179 NTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRP---HDIACFVAEPIQGEGGDRHFRPEFFA 255 (449)
T ss_dssp CSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHST---TTEEEEEECSEETTTTCEECCHHHHH
T ss_pred CCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcC---CceEEEEEeCcCCCCCCccCCHHHHH
Confidence 112333 566666542 111 245667888886421 24689999999999999888 99
Q ss_pred -HHHHHhhCCcEEEEecccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCC-Ccee
Q 006746 293 -WMRIAQENDWHILIDACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVS 367 (632)
Q Consensus 293 -i~~~a~~~g~~vlvDaaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~g-G~v~ 367 (632)
+.++|+++|+++++|.+|. ++.. +..++.....+|++++| |.+ | +|++++++++++.+.+.+.+ +..
T Consensus 256 ~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~s--K~l---~--iG~~~~~~~~~~~l~~~~~~~~~~- 327 (449)
T 2cjg_A 256 AMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFG--KKT---Q--VCGVMAGRRVDEVADNVFAVPSRL- 327 (449)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--GGG---S--SEEEEECGGGGGSTTCTTTSTTSS-
T ss_pred HHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEEec--Ccc---c--EEEEEECHHHhhhhhhcccCCccc-
Confidence 9999999999999999988 3321 01111123468988766 966 4 78999999887765542211 000
Q ss_pred ecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCC
Q 006746 368 LLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGG 447 (632)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 447 (632)
.+| |. .|.+...+..
T Consensus 328 --------------------------------~~t--~~------------~n~~~~~aa~------------------- 342 (449)
T 2cjg_A 328 --------------------------------NST--WG------------GNLTDMVRAR------------------- 342 (449)
T ss_dssp --------------------------------CCS--SS------------SCHHHHHHHH-------------------
T ss_pred --------------------------------ccC--CC------------CCHHHHHHHH-------------------
Confidence 001 00 1111222222
Q ss_pred chhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCc-EEEECCCCCCCCCcEEEEEEccCCCCccCHHH
Q 006746 448 SEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNAL-VKIYGPKIRFDRGPALAFNVFDWKREKIEPVL 526 (632)
Q Consensus 448 ~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~-v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~ 526 (632)
++|+.+.+ +.+.+|++.+.++|++.|.++.. +.|. +... ...|.++.|.+.+. .....
T Consensus 343 -----aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~----~~~~~~~~~-----~~~g~~~~~~~~~~----~~~~~ 401 (449)
T 2cjg_A 343 -----RILEVIEA---EGLFERAVQHGKYLRARLDELAA----DFPAVVLDP-----RGRGLMCAFSLPTT----ADRDE 401 (449)
T ss_dssp -----HHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHH----HSTTTSEEE-----EEETTEEEEECSSH----HHHHH
T ss_pred -----HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh----hCCCceeeE-----eeccEEEEEEECCh----HHHHH
Confidence 67776655 34678888999999999987620 0132 2221 12577888766531 12334
Q ss_pred HHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHH
Q 006746 527 VQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 606 (632)
Q Consensus 527 V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l 606 (632)
+.+.+.++||.++.| +.+.||+|+++.+|.+||+++++.|
T Consensus 402 ~~~~l~~~Gv~v~~~----------------------------------------g~~~iRi~~~~~~t~e~i~~~l~~l 441 (449)
T 2cjg_A 402 LIRQLWQRAVIVLPA----------------------------------------GADTVRFRPPLTVSTAEIDAAIAAV 441 (449)
T ss_dssp HHHHHHHTTEECEEE----------------------------------------TTTEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEecC----------------------------------------CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 444344578887632 2369999999999999999999999
Q ss_pred HHhhhh
Q 006746 607 AQFLDA 612 (632)
Q Consensus 607 ~~~l~~ 612 (632)
+++++.
T Consensus 442 ~~~l~~ 447 (449)
T 2cjg_A 442 RSALPV 447 (449)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988753
No 181
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.73 E-value=8.5e-17 Score=172.48 Aligned_cols=206 Identities=9% Similarity=0.027 Sum_probs=142.3
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a~ 186 (632)
.--+|+|+.+..+....+.+++....... ..+ +| +. ..| ..+.|+.++++++..
T Consensus 34 ~~g~~~d~~~~~~~~~~v~~a~~~~~~~~--~~~-----------~Y----~~---~~g------~~~lr~~ia~~~~~~ 87 (401)
T 7aat_A 34 GVGAYRDDNGKPYVLNCVRKAEAMIAAKK--MDK-----------EY----LP---IAG------LADFTRASAELALGE 87 (401)
T ss_dssp CCCSCCCTTSCCCCCHHHHHHHHHHHHTT--CCC-----------CC----CC---TTC------CHHHHHHHHHHHHCT
T ss_pred eeeeEECCCCCEechHHHHHHHHHhcccc--ccc-----------CC----CC---CCC------CHHHHHHHHHHhcCC
Confidence 45679999999888888888765432110 000 00 00 011 247888888888753
Q ss_pred ------CCCccEEE--eCCHHHHHHHHHhhCC--CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC-Ccccc
Q 006746 187 ------ENDYGMVF--TANRTSAFKLLAESYP--FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW-PRLRI 254 (632)
Q Consensus 187 ------~~ey~vvf--t~naT~al~lv~~sl~--~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~-~~~~i 254 (632)
++ +|+| |+|+|+|+++++..+. .++||+|++. ..|++ + ...++..|++++.++.+. .++.+
T Consensus 88 ~~~~~~~~--~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~--~---~~~~~~~g~~~~~~~~~~~~~~~~ 160 (401)
T 7aat_A 88 NSEAFKSG--RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGN--H---TPIFRDAGLQLQAYRYYDPKTCSL 160 (401)
T ss_dssp TCHHHHTT--CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTT--H---HHHHHHTTCEEEEEECEETTTTEE
T ss_pred CccccccC--ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchh--H---HHHHHHcCCeeEeeeeeccccCcc
Confidence 55 6766 9999999999887652 3789997754 34543 2 234567899999999852 35779
Q ss_pred CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEecccc-CCCC-----CCCCC--CC
Q 006746 255 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACAL-GPKD-----MDSFG--LS 322 (632)
Q Consensus 255 ~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~-~g~~-----m~~ld--ls 322 (632)
+++++++.+.+. +.++++++++..+|+||..++ ++ |+++|+++|+++++|.+.. +..+ ..++. ..
T Consensus 161 d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 237 (401)
T 7aat_A 161 DFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIE 237 (401)
T ss_dssp CHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred CHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHh
Confidence 999988888752 235689999999999998887 55 6788999999999998743 2221 00010 02
Q ss_pred CCCCcEEEEccccccCCCCCc--eEEEEEe
Q 006746 323 LVRPDFLICSFYQIFGENPSG--FGCLFVK 350 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr 350 (632)
...-.+++.|++|.|| +.| +|+|++.
T Consensus 238 ~~~~~i~~~S~sK~~~--~~G~RiG~l~~~ 265 (401)
T 7aat_A 238 QGIDVVLSQSYAKNMG--LYGERAGAFTVI 265 (401)
T ss_dssp TTCCCEEEEECTTTSC--CGGGCEEEEEEE
T ss_pred cCCcEEEEecCCcccc--cccCceEEEEEE
Confidence 2345789999999999 557 7998873
No 182
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.72 E-value=5.3e-17 Score=177.90 Aligned_cols=202 Identities=14% Similarity=0.129 Sum_probs=138.1
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc-CC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL-NI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l-~a 185 (632)
.--+|+|+.+..+..+.+.+++...........+ +| ... .| ..+.|+.+++++ |.
T Consensus 55 ~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~-----------~Y--~~~-----~G------~~~lr~~ia~~l~g~ 110 (448)
T 3meb_A 55 GVGAYRDESGKPWILPAVKEAEAIISSDLSKYNK-----------EY--PPV-----AG------FPLFLEAAQFLMFGK 110 (448)
T ss_dssp SSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCC-----------SC--CCT-----TC------CHHHHHHHHHHHHCT
T ss_pred ecccccCCCCCEechHHHHHHHHHHhhcccCCCC-----------CC--CCC-----cc------hHHHHHHHHHHhcCC
Confidence 4567999999999999999985443200000000 01 000 01 247899999987 87
Q ss_pred C-----CCCccEEE--eCCHHHHHHHHHh--hCCCCCCCeEEEec-cccchhhHHHHHHHH----hcCCEEEEEec-cCC
Q 006746 186 S-----ENDYGMVF--TANRTSAFKLLAE--SYPFMSVKNLLTVY-DYESEAVEAMIRTSE----KRGARVMSAEF-SWP 250 (632)
Q Consensus 186 ~-----~~ey~vvf--t~naT~al~lv~~--sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~----~~G~~v~~v~~-~~~ 250 (632)
+ ++ .|+| |+++|+|+++++. .+ +.+||+|++.. .|++ . ...++ ..|++++.++. +..
T Consensus 111 ~~~~~~~~--~i~~~~t~ggt~al~l~~~~~~~-~~~gd~Vlv~~p~~~~-~----~~~~~~~~~~~G~~v~~~~~~~~~ 182 (448)
T 3meb_A 111 DSKAAQEG--RIASCQSLSGTGSLHIGFEFLHL-WMPKAEFYMPSTTWPN-H----YGIYDKVFNKLKVPYKEYTYLRKD 182 (448)
T ss_dssp TCHHHHTT--CEEEEEESHHHHHHHHHHHHHHH-HCTTCCEEEESSCCTH-H----HHHHHHHHCTTTSCCEEECCBCTT
T ss_pred CccccCcC--cEEEEECCcHHHHHHHHHHHHHH-hCCCCEEEECCCCCHh-H----HHHHHhhHHhCCCeEEEEeccccc
Confidence 6 34 7999 9999999998543 33 56899977544 5543 2 23344 78999999998 533
Q ss_pred -ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc-CCCCCCCCC----
Q 006746 251 -RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL-GPKDMDSFG---- 320 (632)
Q Consensus 251 -~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~-~g~~m~~ld---- 320 (632)
++.+|+++|++.+++.. ..+.+++++..+|+||..+|.+ |+++|+++|+++++|.+.. ++. ..++
T Consensus 183 ~~~~~d~e~l~~~l~~~~---~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~--~~~~~~~~ 257 (448)
T 3meb_A 183 GELEIDFSNTKKDIQSAP---EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFAT--GSFEADAF 257 (448)
T ss_dssp SCSSBCHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSS--SCHHHHTH
T ss_pred cCCCcCHHHHHHHHHhCC---CCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccC--CCcccCch
Confidence 47899999999998521 2358899999999999999855 5678899999999999844 332 1211
Q ss_pred -C----CCCCCcEEEEccccccCCCCCc--eEEE
Q 006746 321 -L----SLVRPDFLICSFYQIFGENPSG--FGCL 347 (632)
Q Consensus 321 -l----s~~~~Df~~~S~hK~~G~~P~G--~G~L 347 (632)
+ ....-.+++.|++|.|| +.| +|++
T Consensus 258 ~~~~~~~~~~~~i~~~S~SK~~g--~~G~RiG~l 289 (448)
T 3meb_A 258 AVRMFVDAGVEVLVAQSFSKNFG--LYGERIGCL 289 (448)
T ss_dssp HHHHHHHTTCCEEEEEECTTTSC--CGGGCCEEE
T ss_pred hHHHHhhcCCcEEEEecccccCC--Cccccceee
Confidence 1 11223477999999999 557 6777
No 183
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.72 E-value=1.4e-16 Score=170.75 Aligned_cols=331 Identities=11% Similarity=0.094 Sum_probs=207.0
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|+|+++. |.-++.+++++.+.+... +.. .+ . | ..+...+.+++++
T Consensus 37 ~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~--------~~~---------~~---~--~---~~~~~~~l~~~la 91 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGHAHPELREALNEQASKF--------WHT---------GN---G--Y---TNEPVLRLAKKLI 91 (406)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTC--------SCC---------CT---T--S---CCHHHHHHHHHHH
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhc--------ccc---------cC---C--c---CCHHHHHHHHHHH
Confidence 56779999876 233778888876544321 000 00 0 1 1245678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCC------CC-CeEE-EeccccchhhHHHHHHHHh---------cCCEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFM------SV-KNLL-TVYDYESEAVEAMIRTSEK---------RGARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~------~g-d~il-t~~d~~s~~v~~~~~~a~~---------~G~~v~ 243 (632)
++++.+ .|+||+|+|+|+.+++..+-.. +| ++|+ ....||......+ ..... .+.++.
T Consensus 92 ~~~~~~----~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 166 (406)
T 4adb_A 92 DATFAD----RVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTV-SAGGQPAYSQDFAPLPADIR 166 (406)
T ss_dssp HHSSCS----EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHH-HHSSCGGGTGGGCSCCSSEE
T ss_pred hhCCCC----eEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHh-hccCCccccccCCCCCCCce
Confidence 999864 6999999999999998876210 45 7765 4556665322221 11100 013444
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCcccc-----chH-HHHHHhhCCcEEEEecccc-CCCC-
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-----PYL-WMRIAQENDWHILIDACAL-GPKD- 315 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~-----pl~-i~~~a~~~g~~vlvDaaq~-~g~~- 315 (632)
.++. .|+++|++++++ ++++|++. ..|.||..+ +++ |.++|+++|+++++|.++. ++..
T Consensus 167 ~~~~------~d~~~l~~~l~~------~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g 233 (406)
T 4adb_A 167 HAAY------NDINSASALIDD------STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG 233 (406)
T ss_dssp EECT------TCHHHHHTTCST------TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred EeCC------CcHHHHHHHhcC------CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc
Confidence 4443 368888887764 35888888 457777654 578 8999999999999999985 2211
Q ss_pred -CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchh
Q 006746 316 -MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKS 394 (632)
Q Consensus 316 -m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 394 (632)
...++.....+|++ +++|.+| +...+|+++++++.++.+.+...+++ |
T Consensus 234 ~~~~~~~~~~~~d~~--t~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~----------~------------------ 282 (406)
T 4adb_A 234 ELYAYMHYGVTPDLL--TTAKALG-GGFPVGALLATEECARVMTVGTHGTT----------Y------------------ 282 (406)
T ss_dssp SSSHHHHHTCCCSEE--EECGGGG-TTSCCEEEEECHHHHHTCCTTSSCCS----------S------------------
T ss_pred hhHHHHhcCCCCCEE--Eechhhc-CCCCeEEEEEcHHHHhhhccCCcCCC----------C------------------
Confidence 01112223457877 5699888 23349999999887766654321100 0
Q ss_pred hhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHH
Q 006746 395 KQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLI 474 (632)
Q Consensus 395 ~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~ 474 (632)
. .+.....+.. ++|+.+. .+.+.++.+.+.
T Consensus 283 -----------~------------~~~~~~~a~~------------------------~~l~~~~---~~~~~~~~~~~~ 312 (406)
T 4adb_A 283 -----------G------------GNPLASAVAG------------------------KVLELIN---TPEMLNGVKQRH 312 (406)
T ss_dssp -----------T------------TCHHHHHHHH------------------------HHHHHHS---SHHHHHHHHHHH
T ss_pred -----------C------------CCHHHHHHHH------------------------HHHHHHH---hcCHHHHHHHHH
Confidence 0 0001111111 4555443 378888999999
Q ss_pred HHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHH
Q 006746 475 NWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK 554 (632)
Q Consensus 475 ~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~ 554 (632)
+++.+.|.++... .+.+. . ....+.++.|.+.+... .+...+.+.+.++||.++.+
T Consensus 313 ~~l~~~l~~~~~~----~~~~~---~--~~~~g~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~------------- 368 (406)
T 4adb_A 313 DWFVERLNTINHR----YGLFS---E--VRGLGLLIGCVLNADYA--GQAKQISQEAAKAGVMVLIA------------- 368 (406)
T ss_dssp HHHHHHHHHHHHH----HCCEE---E--EEEETTEEEEEECTTTT--TCHHHHHHHHHHTTEECEES-------------
T ss_pred HHHHHHHHHHHHh----CCCce---E--EEEEEEEEEEEEeCCcH--HHHHHHHHHHHHCCcEEeec-------------
Confidence 9999999876210 01111 1 01246788888865211 14555665555669988643
Q ss_pred hhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 555 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 555 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
+.+.||+++++.+|.+||+++++.|+++++.
T Consensus 369 ---------------------------~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~ 399 (406)
T 4adb_A 369 ---------------------------GGNVVRFAPALNVSEEEVTTGLDRFAAACEH 399 (406)
T ss_dssp ---------------------------STTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------CCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2369999999999999999999999998764
No 184
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.72 E-value=3.7e-17 Score=175.03 Aligned_cols=191 Identities=13% Similarity=0.056 Sum_probs=138.6
Q ss_pred ceEeecCCC---CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC
Q 006746 109 HTCLDYFGI---GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 109 ~vyLD~ag~---gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
.+| |+++. .+.|+.+++++..+ .++. ...+++++.+++++|+
T Consensus 29 ~v~-~~~~~~~~~~~~~~v~~a~~~~------------------------~~~~----------~~~~~~~~~~a~~~g~ 73 (374)
T 2aeu_A 29 ALY-DLSGLSGGFLIDEKDKALLNTY------------------------IGSS----------YFAEKVNEYGLKHLGG 73 (374)
T ss_dssp GCE-ECSSCCCCCCCCHHHHHHHTST------------------------THHH----------HHHHHHHHHHHHHHTC
T ss_pred cee-eecccCCCCCCCHHHHHHHHHh------------------------cCch----------HHHHHHHHHHHHHhCC
Confidence 578 88864 48889999987521 1221 2235677777899999
Q ss_pred CCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHH
Q 006746 186 SENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVV 264 (632)
Q Consensus 186 ~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~ 264 (632)
++. ..+++|+|+|+|+.+++.++ +||+|++. ..|++ ....+ +.++..|++++.+ .|+++|+++ +
T Consensus 74 ~~~-~~~~~~~ggt~a~~~~~~~~---~gd~Vl~~~~~y~~-~~~~~-~~~~~~g~~~~~v--------~d~~~l~~~-~ 138 (374)
T 2aeu_A 74 DEN-DKCVGFNRTSSAILATILAL---KPKKVIHYLPELPG-HPSIE-RSCKIVNAKYFES--------DKVGEILNK-I 138 (374)
T ss_dssp CTT-EEEEEESSHHHHHHHHHHHH---CCSEEEEECSSSSC-CTHHH-HHHHHTTCEEEEE--------SCHHHHHTT-C
T ss_pred CCc-ceEEEEcChHHHHHHHHHhC---CCCEEEEecCCCCc-cHHHH-HHHHHcCcEEEEe--------CCHHHHHhc-C
Confidence 521 26899999999999999987 89997654 45554 23332 3567789999877 267787766 3
Q ss_pred hcCcCCCceeE-EEEeccCCCCc-cccchH-HHHHHhhCCcEEEEeccccCCCCCCCC-C--CCCCCCcEEEEccccccC
Q 006746 265 SKGKKKKQRGL-FVFPLHSRMTG-ARYPYL-WMRIAQENDWHILIDACALGPKDMDSF-G--LSLVRPDFLICSFYQIFG 338 (632)
Q Consensus 265 ~~~~~~~~~~L-v~~~~~sn~TG-~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~l-d--ls~~~~Df~~~S~hK~~G 338 (632)
+ ++++ +++++.+|+|| ...|++ |.++|+++|+++++|.++..... .+. . .-.+++|+++.|++|+++
T Consensus 139 ~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~di~~~S~sK~l~ 211 (374)
T 2aeu_A 139 D------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVR-LLFNQPPALKLGADLVVTSTDKLME 211 (374)
T ss_dssp C------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH-HHTTCCCHHHHTCSEEEEETTSSSS
T ss_pred C------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccc-cccccCCccccCCcEEEecCccccc
Confidence 2 3588 99999999999 889999 99999999999999998654320 000 0 112578999999999776
Q ss_pred CCCCceEEEEEeCCCccccC
Q 006746 339 ENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 339 ~~P~G~G~L~Vr~~~~~~L~ 358 (632)
. | ++|+++.+++.++.+.
T Consensus 212 g-~-~~G~~~~~~~~~~~l~ 229 (374)
T 2aeu_A 212 G-P-RGGLLAGKKELVDKIY 229 (374)
T ss_dssp S-C-SCEEEEEEHHHHHHHH
T ss_pred C-c-ceEEEEECHHHHHHHH
Confidence 3 5 8999999987765443
No 185
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.71 E-value=1e-15 Score=165.14 Aligned_cols=216 Identities=14% Similarity=0.072 Sum_probs=140.8
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc---
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL--- 183 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l--- 183 (632)
.--.|+|..+..+.+..+.+++....... ...|+... -..+.|+.+++++
T Consensus 44 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-------------------------~~~y~~~~--g~~~lr~~ia~~~~~~ 96 (418)
T 3rq1_A 44 TLGAIHDEEGNLVFLKTVKEEYLSLSDSE-------------------------HVGYAPIA--GIPDFLCAAEKECFGN 96 (418)
T ss_dssp CSSCCBCTTSCBCCCHHHHHHHHTCCHHH-------------------------HHSCCCTT--CCHHHHHHHHHHHHGG
T ss_pred CCCcccCCCCCccccHHHHHHHHHhcccc-------------------------cCCCCCCC--ChHHHHHHHHHHHhcc
Confidence 34557777778888888888876532100 00011100 0135677777765
Q ss_pred -CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHH
Q 006746 184 -NISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 261 (632)
Q Consensus 184 -~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~ 261 (632)
+.+. ...|++|+|+|+|+.+++.++ .++||+|++.. .|++ ....++..|++++.++.+.+++.+|+++|++
T Consensus 97 ~~~~~-~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~ 169 (418)
T 3rq1_A 97 FRPEG-HIRSIATAGGTGGIHHLIHNY-TEPGDEVLTADWYWGA-----YRVICSDTGRTLVTYSLFDEHNNFNHEAFQN 169 (418)
T ss_dssp GCCSS-EEEEEEESHHHHHHHHHHHHH-SCTTCEEEEESSCCTH-----HHHHHHHTTCEEEEECSBCTTSSBCHHHHHH
T ss_pred cCccc-cccEEECCchHHHHHHHHHHh-cCCCCEEEECCCCchh-----HHHHHHHcCCEEEEEeeeCCCCCcCHHHHHH
Confidence 3221 226999999999999999998 78999987654 4442 2345677899999999865556799999999
Q ss_pred HHHhcCcCCCceeEEEEecc-CCCCccccchH-HHHHH---h------hCCcEEEEeccccC-CCC---CCCC--CCCCC
Q 006746 262 MVVSKGKKKKQRGLFVFPLH-SRMTGARYPYL-WMRIA---Q------ENDWHILIDACALG-PKD---MDSF--GLSLV 324 (632)
Q Consensus 262 ~i~~~~~~~~~~~Lv~~~~~-sn~TG~~~pl~-i~~~a---~------~~g~~vlvDaaq~~-g~~---m~~l--dls~~ 324 (632)
++++... .+...+++++.. +|+||..+|.+ |.+++ + ++|+++++|.++.. ..+ ..++ .....
T Consensus 170 ~l~~~~~-~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 248 (418)
T 3rq1_A 170 RVNELAA-KQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHL 248 (418)
T ss_dssp HHHHHHH-HCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTC
T ss_pred HHHHhhc-cCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhc
Confidence 9975200 001247888877 89999999987 66554 4 89999999998532 110 0011 11222
Q ss_pred CCc---EEEEccccccCCCCCceEEEEE---eCCCcccc
Q 006746 325 RPD---FLICSFYQIFGENPSGFGCLFV---KKSTVPIL 357 (632)
Q Consensus 325 ~~D---f~~~S~hK~~G~~P~G~G~L~V---r~~~~~~L 357 (632)
..| +++.|++|.+|.+...+|+++. +++.++.+
T Consensus 249 ~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 287 (418)
T 3rq1_A 249 PKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEF 287 (418)
T ss_dssp CTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHH
T ss_pred CCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHH
Confidence 345 7888999998842234688887 55554433
No 186
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.71 E-value=7.1e-17 Score=173.75 Aligned_cols=335 Identities=10% Similarity=-0.022 Sum_probs=211.6
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc-CC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL-NI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l-~a 185 (632)
..-.|+|..+....++.+.+++.+.+..... ...|+.. .-..+.|+.|++++ +.
T Consensus 36 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-----------------------~~~y~~~--~g~~~lr~~la~~~~~~ 90 (412)
T 1ajs_A 36 GVGAYRTDDCQPWVLPVVRKVEQRIANNSSL-----------------------NHEYLPI--LGLAEFRTCASRLALGD 90 (412)
T ss_dssp CSCCCCCTTSCCCCCHHHHHHHHHHHTCTTC-----------------------CCCCCCT--TCCHHHHHHHHHHHHCT
T ss_pred ccceecCCCCCccccHHHHHHHHHhhhChhh-----------------------ccCCCCC--CCCHHHHHHHHHHHhcC
Confidence 4456777777777788888887654311000 0001110 11247899999999 53
Q ss_pred -----CCCCccEEE--eCCHHHHHHHHHhhCC-CCCC-----CeEEEe-ccccchhhHHHHHHHHhcCCE-EEEEeccC-
Q 006746 186 -----SENDYGMVF--TANRTSAFKLLAESYP-FMSV-----KNLLTV-YDYESEAVEAMIRTSEKRGAR-VMSAEFSW- 249 (632)
Q Consensus 186 -----~~~ey~vvf--t~naT~al~lv~~sl~-~~~g-----d~ilt~-~d~~s~~v~~~~~~a~~~G~~-v~~v~~~~- 249 (632)
+++ .|+| |+|+|+|+.+++..+. +.+| |+|++. ..|++ ....++..|++ ++.++.+.
T Consensus 91 ~~~~~~~~--~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~-----~~~~~~~~g~~~~~~~~~~~~ 163 (412)
T 1ajs_A 91 DSPALQEK--RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWEN-----HNGVFTTAGFKDIRSYRYWDT 163 (412)
T ss_dssp TCHHHHTT--CEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTH-----HHHHHHHTTCSCEEEEECEET
T ss_pred CCCccCCC--cEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHH-----HHHHHHHcCCceeEEEeeecC
Confidence 544 6999 9999999999965321 4678 887654 46653 23455678999 99998842
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEecccc-CCCC-----CCCC
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL-GPKD-----MDSF 319 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~-~g~~-----m~~l 319 (632)
.+..+++++|++++.+.. .++.++++++.+|+||..+|.+ |+++|+++|+++++|.++. ++.. ..++
T Consensus 164 ~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 240 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENAP---EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAI 240 (412)
T ss_dssp TTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred CCCccCHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHH
Confidence 345689999999997521 2357888999999999998754 6788999999999999843 3221 0012
Q ss_pred C-CCCC-CCcEEEEccccccCCCCCc--eEEEEE---eCCCccccCCCCCCCceeecccccccccccccCCCCCCccccc
Q 006746 320 G-LSLV-RPDFLICSFYQIFGENPSG--FGCLFV---KKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTS 392 (632)
Q Consensus 320 d-ls~~-~~Df~~~S~hK~~G~~P~G--~G~L~V---r~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~ 392 (632)
. +... +-++++.|++|.+| |.| +|++++ +++.++.+.... .
T Consensus 241 ~~~~~~~~~~i~~~s~sK~~~--~~G~riG~~~~~~~~~~~~~~~~~~~-----------~------------------- 288 (412)
T 1ajs_A 241 RYFVSEGFELFCAQSFSKNFG--LYNERVGNLTVVAKEPDSILRVLSQM-----------Q------------------- 288 (412)
T ss_dssp HHHHHTTCCEEEEEECTTTSC--CGGGCEEEEEEECSSHHHHHHHHHHH-----------H-------------------
T ss_pred HHHhccCCcEEEEEecccccC--CCCcceEEEEEecCCHHHHHHHHHHH-----------H-------------------
Confidence 1 1111 22489999999999 768 799998 554322111000 0
Q ss_pred hhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHH-----hhCHHHHH
Q 006746 393 KSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD-----SLGLTMIS 467 (632)
Q Consensus 393 ~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~-----~~Gl~~I~ 467 (632)
... ..+ + ++++.+...++. ++|+... ...++.+.
T Consensus 289 -~~~---~~~--~-----------~~~~~~~~~a~~------------------------~~l~~~~~~~~~~~~~~~~~ 327 (412)
T 1ajs_A 289 -KIV---RVT--W-----------SNPPAQGARIVA------------------------RTLSDPELFHEWTGNVKTMA 327 (412)
T ss_dssp -HHH---HTT--T-----------SSCCSHHHHHHH------------------------HHHHSHHHHHHHHHHHHHHH
T ss_pred -HHH---hcc--c-----------CCCChHHHHHHH------------------------HHHcCcchhHHHHHHHHHHH
Confidence 000 000 0 001111122222 4454331 12468888
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCC-cEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCCh
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNA-LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p-~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
++.+.+.++|.+.|.++ |.| .++++.| .++.+.| .+ ++...+.+++.++||.++.
T Consensus 328 ~~~~~~~~~l~~~L~~~------~~~~~~~~~~~-----~~~~~~~--~~-----~~~~~~~~~l~~~gv~v~~------ 383 (412)
T 1ajs_A 328 DRILSMRSELRARLEAL------KTPGTWNHITD-----QIGMFSF--TG-----LNPKQVEYLINQKHIYLLP------ 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHT------TCSSCCHHHHH-----CCSSEEE--CC-----CCHHHHHHHHHTTCEECCT------
T ss_pred HHHHHHHHHHHHHHHhh------CCCCCeeEEcC-----CCceEEE--eC-----CCHHHHHHHHHhCCEEecC------
Confidence 99999999999999987 211 2333322 3444443 23 4466777888888988741
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.+|+|++. .+.+|++++++.|+++++.
T Consensus 384 --------------------------------------~~Ris~~~-~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 384 --------------------------------------SGRINMCG-LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp --------------------------------------TSEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred --------------------------------------CcEEEeee-CCHHHHHHHHHHHHHHHHh
Confidence 25999985 4899999999999988753
No 187
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.70 E-value=4.7e-17 Score=173.95 Aligned_cols=165 Identities=15% Similarity=0.117 Sum_probs=121.3
Q ss_pred HHHHHHHHHHc-CC--CCCCccEEE--eCCHHHHHHHHHhhCC-CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL-NI--SENDYGMVF--TANRTSAFKLLAESYP-FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l-~a--~~~ey~vvf--t~naT~al~lv~~sl~-~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.|++++ +. +++ .|+| |+|+|+|+.+++..+. +.+||+|++. ..|++ ....++..|++++.+
T Consensus 72 ~~lr~~la~~~~~~~~~~~--~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~~ 144 (394)
T 2ay1_A 72 PEFQKAMGELILGDGLKSE--TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPN-----HVSIMNFMGLPVQTY 144 (394)
T ss_dssp HHHHHHHHHHHHGGGCCGG--GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHH-----HHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhCCCCCcc--cEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChh-----HHHHHHHcCCceEEE
Confidence 47899999987 55 444 7999 9999999999987763 3589997654 45553 234456789999999
Q ss_pred eccC-CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCC-----
Q 006746 246 EFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKD----- 315 (632)
Q Consensus 246 ~~~~-~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~----- 315 (632)
+.+. .++.++.+++++++++.. ..+.++++++.+|+||..+|.+ |+++|+++|+++++|.++.....
T Consensus 145 ~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 221 (394)
T 2ay1_A 145 RYFDAETRGVDFEGMKADLAAAK---KGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEED 221 (394)
T ss_dssp ECEETTTTEECHHHHHHHHHTCC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHH
T ss_pred ecccccCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccc
Confidence 8852 345689999999997531 2357888999999999999754 57889999999999999875320
Q ss_pred CCCCC-CCCCCC-cEEEEccccccCCCCCce--EEEEE
Q 006746 316 MDSFG-LSLVRP-DFLICSFYQIFGENPSGF--GCLFV 349 (632)
Q Consensus 316 m~~ld-ls~~~~-Df~~~S~hK~~G~~P~G~--G~L~V 349 (632)
..++. +...+. ++++.|++|.+| +.|+ |++++
T Consensus 222 ~~~~~~~~~~~~~~i~~~s~sK~~~--~~G~riG~~~~ 257 (394)
T 2ay1_A 222 AAGTRLIASRIPEVLIAASCSKNFG--IYRERTGCLLA 257 (394)
T ss_dssp HHHHHHHHHHCSSEEEEEECTTTTT--CGGGCEEEEEE
T ss_pred hHHHHHHhhcCCCEEEEEeccCCCc--CcCCccceEEE
Confidence 01122 222233 477889999999 5575 99998
No 188
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.70 E-value=6.6e-17 Score=174.00 Aligned_cols=285 Identities=9% Similarity=0.013 Sum_probs=186.1
Q ss_pred HHHHHHHHHHcCC-----CCCCccEEEeCCHHHHHHHHHhhCCCCCCC----eEEEec-cccchhhHHHHHHHHhcCCEE
Q 006746 173 SAMKKRIMDFLNI-----SENDYGMVFTANRTSAFKLLAESYPFMSVK----NLLTVY-DYESEAVEAMIRTSEKRGARV 242 (632)
Q Consensus 173 ~~~R~~ia~~l~a-----~~~ey~vvft~naT~al~lv~~sl~~~~gd----~ilt~~-d~~s~~v~~~~~~a~~~G~~v 242 (632)
.+.|+.|+++++. +++ .+|++|+|+++|+.+++.++ .++|| +|++.. .|++ ....++..|+++
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~l-~~~Gd~~~~~Vlv~~P~y~~-----~~~~~~~~g~~~ 143 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATED-RYIVVGTGSTQLCQAAVHAL-SSLARSQPVSVVAAAPFYST-----YVEETTYVRSGM 143 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSS-SEEEEEEHHHHHHHHHHHHH-HHTSSSSSEEEEECSSCCTH-----HHHHHHTTCBTT
T ss_pred HHHHHHHHHHHHhcCCCCCCC-CeEEEeCChHHHHHHHHHHh-cCCCCCCcceEEEcCCCchh-----HHHHHHHcCCeE
Confidence 4789999998873 232 27999999999999999998 67899 877654 5542 234567789999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCCCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLS 322 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ldls 322 (632)
+.++++... +. . +++++++++..+|+||..++ +|++.++.+++++++|.++..+. ..++..
T Consensus 144 ~~~~~d~~~--l~--------~------~~~k~v~l~~p~NPtG~~~~-~l~~~~~~~~~~ii~De~y~~~~-~~~l~~- 204 (391)
T 3bwn_A 144 YKWEGDAWG--FD--------K------KGPYIELVTSPNNPDGTIRE-TVVNRPDDDEAKVIHDFAYYWPH-YTPITR- 204 (391)
T ss_dssp EEEEEESTT--CC--------C------CSCEEEEEESSCTTTCCCCC-CCC-----CCCEEEEECTTCSTT-TSCCCC-
T ss_pred EEecCCHHH--cC--------C------CCCEEEEECCCCCCCchhHH-HHHHHhhcCCCEEEEeCCCCCCC-CCcccc-
Confidence 888876322 11 1 13589999999999999997 56553344459999999987542 134443
Q ss_pred CCCCcEEEEccccccCCCCCce--EEEEE-eCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhh
Q 006746 323 LVRPDFLICSFYQIFGENPSGF--GCLFV-KKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 399 (632)
Q Consensus 323 ~~~~Df~~~S~hK~~G~~P~G~--G~L~V-r~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e 399 (632)
..+.++++.|++|.|| ++|+ |++++ ++++++.+..... . .
T Consensus 205 ~~~~~i~~~S~SK~~g--~~GlRiG~~~~~~~~l~~~l~~~~~--------------------------------~---~ 247 (391)
T 3bwn_A 205 RQDHDIMLFTFSKITG--HAGSRIGWALVKDKEVAKKMVEYII--------------------------------V---N 247 (391)
T ss_dssp CBCCSEEEEEHHHHHS--CGGGCEEEEEECCHHHHHHHHHHHH--------------------------------H---H
T ss_pred CCCCeEEEEechhhcC--CCccceEEEEecCHHHHHHHHHHhc--------------------------------c---c
Confidence 4567899999999999 5586 99998 5555443322100 0 0
Q ss_pred ccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHH---------hhCHHHHHHHH
Q 006746 400 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD---------SLGLTMISRRG 470 (632)
Q Consensus 400 ~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~---------~~Gl~~I~~r~ 470 (632)
..+ .+.+...++. .+|+... +..++.+.++.
T Consensus 248 ~~~----------------~~~~~q~a~~------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
T 3bwn_A 248 SIG----------------VSKESQVRTA------------------------KILNVLKETCKSESESENFFKYGREMM 287 (391)
T ss_dssp HSS----------------CCHHHHHHHH------------------------HHHHHHHHHTTCCCTTTSHHHHHHHHH
T ss_pred ccC----------------CCHHHHHHHH------------------------HHHhCcchhccccccHHHHHHHHHHHH
Confidence 000 0111111111 3444321 22367788889
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC---------CCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccC
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIR---------FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYG 541 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~---------~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G 541 (632)
+...+++.+.|.++ |.+++..|... ...|..+.+.+.+ .+.+.++++++||.++.|
T Consensus 288 ~~~~~~l~~~L~~~--------~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~-------~~~~~~~l~~~gV~v~pg 352 (391)
T 3bwn_A 288 KNRWEKLREVVKES--------DAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE-------ETDLVSELRRHKVMSRAG 352 (391)
T ss_dssp HHHHHHHHHHHHTC--------SSEECCCCCCEEETTTTEEECCCCSEEEEEESS-------SCCHHHHHHHTTEECEEG
T ss_pred HHHHHHHHHHHHhC--------CCcccccCCccccccccccCCCcceEEEecCCc-------HHHHHHHHHHCCEEEccC
Confidence 99999999999886 45777655321 0122345556553 135677888899999987
Q ss_pred ccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 542 SLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 542 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
..|.. +.+.||+|++ ++.++++++++.|+++++.
T Consensus 353 ~~fg~-----------------------------------~~~~iRis~~--~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 353 ERCGS-----------------------------------DKKHVRVSML--SREDVFNVFLERLANMKLI 386 (391)
T ss_dssp GGGTC-----------------------------------CTTEEEEESC--SCHHHHHHHHHHHHSCC--
T ss_pred CCCCC-----------------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 54310 2368999999 4899999999999887643
No 189
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.70 E-value=1.8e-15 Score=163.73 Aligned_cols=165 Identities=8% Similarity=0.057 Sum_probs=124.9
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHH-HHhcCC
Q 006746 163 LHGGQESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRT-SEKRGA 240 (632)
Q Consensus 163 ~~g~~~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~-a~~~G~ 240 (632)
.|+.......++.+++++++.|++ .+++++|+++|+.++ ..+ .++||+|++. ..|++ ....+... .++.|+
T Consensus 60 ~y~r~~~p~~~~l~~~la~l~g~~----~~~~~~sG~~Ai~~~-~~l-~~~gd~Vi~~~~~y~~-~~~~~~~~~~~~~g~ 132 (400)
T 3nmy_A 60 EYSRTHNPTRFAYERCVAALEGGT----RAFAFASGMAATSTV-MEL-LDAGSHVVAMDDLYGG-TFRLFERVRRRTAGL 132 (400)
T ss_dssp CBTTTCCHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHH-HTT-SCTTCEEEEESSCCHH-HHHHHHHTHHHHHCC
T ss_pred ccccCCCHHHHHHHHHHHHHhCCC----CEEEecCHHHHHHHH-HHH-cCCCCEEEEeCCCchH-HHHHHHHhhHhhcCe
Confidence 355545567789999999999985 366677779999985 445 6889997755 45654 34444444 667899
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCCCC
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSF 319 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~~l 319 (632)
+++.++.+ ++++|+++|+++ +++|.+...+|+||...|++ |.++|+++|+++++|.++..|....++
T Consensus 133 ~~~~v~~~------d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~ 200 (400)
T 3nmy_A 133 DFSFVDLT------DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL 200 (400)
T ss_dssp EEEEECTT------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG
T ss_pred EEEEECCC------CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh
Confidence 99988764 678999888754 58999999999999999999 999999999999999998754311244
Q ss_pred CCCCCCCcEEEEccccccCCCCCceEE-EEE
Q 006746 320 GLSLVRPDFLICSFYQIFGENPSGFGC-LFV 349 (632)
Q Consensus 320 dls~~~~Df~~~S~hK~~G~~P~G~G~-L~V 349 (632)
+ +++|+++.|++|++|.+...+|. +++
T Consensus 201 ~---~g~div~~S~sK~l~g~g~~~gG~~vv 228 (400)
T 3nmy_A 201 S---LGADLVVHSATKYLNGHSDMVGGIAVV 228 (400)
T ss_dssp G---GTCSEEEEETTTTTTCSSSCCCEEEEE
T ss_pred h---cCCcEEEecCccccCCCCCcceeEEEE
Confidence 3 47899999999988742123555 444
No 190
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.70 E-value=1.5e-15 Score=174.81 Aligned_cols=312 Identities=11% Similarity=0.037 Sum_probs=205.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEec
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
...+.++++++|++||++ ..+++++++|.|+..+..++ .++||+|+++. .|.| ... .++..|+++++++.
T Consensus 194 ~g~i~eaE~~lA~~fGa~---~a~~v~nGts~An~~ai~al-~~pGD~VLv~r~~H~S-~~~----~l~lsGa~pv~v~~ 264 (715)
T 3n75_A 194 SGPHKEAEQYIARVFNAD---RSYMVTNGTSTANKIVGMYS-APAGSTILIDRNCHKS-LTH----LMMMSDVTPIYFRP 264 (715)
T ss_dssp BTHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHH-CCTTCEEEEESSCCHH-HHH----HHHHSCCEEEEECC
T ss_pred cHHHHHHHHHHHHHhCCC---CceEECcHHHHHHHHHHHHh-CCCCCEEEECCCccHH-HHH----HHHHcCCEEEEEec
Confidence 367889999999999996 25666666679998888888 78999987665 5544 333 34568999999987
Q ss_pred cCCccc----c-----CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCCCC
Q 006746 248 SWPRLR----I-----NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMD 317 (632)
Q Consensus 248 ~~~~~~----i-----~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~m~ 317 (632)
++.+.. + +.++|+++|.++++ .+.++++++++. |.+|..+|++ |+++|+.++ +++|.|+..+....
T Consensus 265 ~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~ 340 (715)
T 3n75_A 265 TRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFS 340 (715)
T ss_dssp CBCTTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGS
T ss_pred cccccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccC
Confidence 533222 3 89999999986431 112347888887 8999999999 999998663 78999987652101
Q ss_pred CC--CCCCC----CCcEE---EEccccccCCCCCceEEEEEeCCCcc-ccCCCCCCCceeecccccccccccccCCCCCC
Q 006746 318 SF--GLSLV----RPDFL---ICSFYQIFGENPSGFGCLFVKKSTVP-ILVDNTSSGMVSLLPAKKQLWLTDEFSSCETE 387 (632)
Q Consensus 318 ~l--dls~~----~~Df~---~~S~hK~~G~~P~G~G~L~Vr~~~~~-~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e 387 (632)
+. +.+.. .+|++ +.|+||.+|. |++.|++.++++... .++. .
T Consensus 341 ~~~~~~~al~~g~~aD~vii~~~S~hKtL~g-ltqgs~i~v~~~i~~~~~~~---------------~------------ 392 (715)
T 3n75_A 341 PIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNE---------------A------------ 392 (715)
T ss_dssp GGGTTSSTTSSSCCTTCEEEEEECHHHHSSC-CTTCEEEEEESCCCHHHHHH---------------H------------
T ss_pred CccccccccccCcCCCEEEEEEecccccccC-CCCeeEEEeCchhhHHHHHH---------------H------------
Confidence 11 12211 26766 9999997775 889999999876210 0000 0
Q ss_pred ccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHh-hCHHHH
Q 006746 388 PEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDS-LGLTMI 466 (632)
Q Consensus 388 ~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~-~Gl~~I 466 (632)
..+ ..+++++.+.+.++. .|++++.. .| ..+
T Consensus 393 -----~~~------------------~~STSpsy~~~Asld------------------------aA~~~~~~~~g-~~~ 424 (715)
T 3n75_A 393 -----YMM------------------HTTTSPHYGIVASTE------------------------TAAAMMKGNAG-KRL 424 (715)
T ss_dssp -----HHH------------------TSCSSCCHHHHHHHH------------------------HHHHHHSHHHH-HHH
T ss_pred -----HHh------------------hcCCCchHHHHHHHH------------------------HHHHHHHhhcc-HHH
Confidence 000 013445666677776 78888764 34 457
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCC-------------------C------CcEEEEEEcc--CCC
Q 006746 467 SRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD-------------------R------GPALAFNVFD--WKR 519 (632)
Q Consensus 467 ~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~-------------------r------g~ivaFnv~~--~~G 519 (632)
.+++..++.+++++|.+++... +| --+++++|..-.. . ..=+++++.+ .+|
T Consensus 425 ~~~l~~~a~~~r~~L~~i~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G 502 (715)
T 3n75_A 425 INGSIERAIKFRKEIKRLRTES-DG-WFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDG 502 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-SS-CCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTS
T ss_pred HHHHHHHHHHHHHHHHHhhhhc-cc-ceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCC
Confidence 7899999999999999883100 00 0145555431000 0 1113444443 233
Q ss_pred C----ccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCC
Q 006746 520 E----KIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLAN 595 (632)
Q Consensus 520 ~----~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t 595 (632)
. -++...+++.++++||.+-- .....|=+=+...+|
T Consensus 503 ~~~~~Gi~g~~~~~~L~~~~I~~E~----------------------------------------~d~~~vl~l~s~g~~ 542 (715)
T 3n75_A 503 TMSDFGIPASIVAKYLDEHGIVVEK----------------------------------------TGPYNLLFLFSIGID 542 (715)
T ss_dssp CBCSSCCCHHHHHHHHHHTTCCCSE----------------------------------------EETTEEEEECCTTCC
T ss_pred ccccCCCcHHHHHHHHHHCCCEEEe----------------------------------------cCCCcEEEEeCCCCC
Confidence 2 36777788877777776521 123456666778899
Q ss_pred HHHHHHHHHHHHHhhh
Q 006746 596 FEDVYRLWAFVAQFLD 611 (632)
Q Consensus 596 ~eDV~rlv~~l~~~l~ 611 (632)
.+++++|+++|.+|-.
T Consensus 543 ~~~~~~L~~aL~~~~~ 558 (715)
T 3n75_A 543 KTKALSLLRALTDFKR 558 (715)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998754
No 191
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.69 E-value=3.8e-17 Score=174.57 Aligned_cols=205 Identities=13% Similarity=0.064 Sum_probs=141.3
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC-
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI- 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a- 185 (632)
..-.|+|..+..+.++.+.+++.+.+.... ...|+. ..-..+.|+.|+++++.
T Consensus 32 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~------------------------~~~y~~--~~g~~~lr~~la~~~~~~ 85 (396)
T 2q7w_A 32 GIGVYKDETGKTPVLTSVKKAEQYLLENET------------------------TKNYLG--IDGIPEFGRCTQELLFGK 85 (396)
T ss_dssp SCCSCCCTTSCCCCCHHHHHHHHHHHHHCC------------------------CCCCCC--TTCCHHHHHHHHHHHHCT
T ss_pred ccccccCCCCCccCcHHHHHHHHhhcCccc------------------------ccCCCC--CCCCHHHHHHHHHHHhcC
Confidence 445678877777788888888755321100 000110 01124789999998832
Q ss_pred -----CCCCccEEE--eCCHHHHHHHHHhhCC-CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccC-CccccC
Q 006746 186 -----SENDYGMVF--TANRTSAFKLLAESYP-FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSW-PRLRIN 255 (632)
Q Consensus 186 -----~~~ey~vvf--t~naT~al~lv~~sl~-~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~-~~~~i~ 255 (632)
+++ .|+| |+|+|+|+.+++..+. +.+||+|++. ..|++ ....++..|++++.++.+. .+..++
T Consensus 86 ~~~~~~~~--~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d 158 (396)
T 2q7w_A 86 GSALINDK--RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPN-----HKSVFNSAGLEVREYAYYDAENHTLD 158 (396)
T ss_dssp TCHHHHTT--CEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTH-----HHHHHHHTTCEEEEEECEETTTTEEC
T ss_pred CCCccccc--cEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchh-----HHHHHHHcCCceEEEecccCCCCCcC
Confidence 344 6888 9999999999987653 4689997654 45553 2344567899999998842 345689
Q ss_pred HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCC-----CCCCCC-CCCC-
Q 006746 256 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPK-----DMDSFG-LSLV- 324 (632)
Q Consensus 256 ~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~-----~m~~ld-ls~~- 324 (632)
.++|++.+.+.+ .+++++++++.+|+||..+|.+ |+++|+++|+++++|.++.... ...++. +...
T Consensus 159 ~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
T 2q7w_A 159 FDALINSLNEAQ---AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMH 235 (396)
T ss_dssp HHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHC
T ss_pred HHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcC
Confidence 999999997531 2358899999999999998754 6788999999999999876421 000121 1111
Q ss_pred CCcEEEEccccccCCCCCc--eEEEEE
Q 006746 325 RPDFLICSFYQIFGENPSG--FGCLFV 349 (632)
Q Consensus 325 ~~Df~~~S~hK~~G~~P~G--~G~L~V 349 (632)
..++++.|++|.+| +.| +|++++
T Consensus 236 ~~~i~~~s~sK~~~--~~G~riG~~~~ 260 (396)
T 2q7w_A 236 KELIVASSYSXNFG--LYNERVGACTL 260 (396)
T ss_dssp SCEEEEEECTTTTT--CGGGCCEEEEE
T ss_pred CcEEEEEecccccc--ccccccceEEE
Confidence 34688999999999 668 599987
No 192
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.69 E-value=1.2e-15 Score=162.83 Aligned_cols=208 Identities=15% Similarity=0.111 Sum_probs=142.0
Q ss_pred CCceEeecCCCCCCCHHHHHHHhc-CCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQES-SPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~-~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a 185 (632)
.--+|+|+.+..+.++.+++++.+ .+..... + .| ... .| ..+.|+.++++++.
T Consensus 32 ~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~-----------~--~y--~~~-----~g------~~~lr~~la~~~~~ 85 (397)
T 3fsl_A 32 SIGLYYNEDGIIPQLQAVAEAEARLNAQPHGA-----------S--LY--LPM-----EG------LNCYRHAIAPLLFG 85 (397)
T ss_dssp SSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCC-----------C--CC--CCT-----TC------CHHHHHHHHHHHHC
T ss_pred eeeEEECCCCCccCcHHHHHHHHhhccCcccc-----------c--cC--CCC-----Cc------hHHHHHHHHHHHhc
Confidence 335688888888888999998776 4432100 0 00 000 01 23688888888865
Q ss_pred ------CCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc-CCccccCH
Q 006746 186 ------SENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS-WPRLRINS 256 (632)
Q Consensus 186 ------~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~-~~~~~i~~ 256 (632)
+++...|+||+|+|+|++++++.+. +++||+|++.. .|++ ....++..|++++.++.. ..++.+|.
T Consensus 86 ~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~ 160 (397)
T 3fsl_A 86 ADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWEN-----HVAIFAGAGFEVSTYPWYDEATNGVRF 160 (397)
T ss_dssp TTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHH-----HHHHHHHTTCCEEEECCEETTTTEECH
T ss_pred CCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchh-----HHHHHHHcCCceEEEeeeeccCCcCcH
Confidence 3332269999999999999964321 57899977654 4442 234567789999999883 24567899
Q ss_pred HHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCC-----CCCC-CC-CCCC
Q 006746 257 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKD-----MDSF-GL-SLVR 325 (632)
Q Consensus 257 ~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~-----m~~l-dl-s~~~ 325 (632)
++|++.+.+. +.++++++++..+|+||..+|.+ |+++|+++|+++++|.+...... ..++ .+ ...+
T Consensus 161 ~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
T 3fsl_A 161 NDLLATLKTL---QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL 237 (397)
T ss_dssp HHHHHHHTTC---CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred HHHHHHHHhC---CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCC
Confidence 9999999742 12468999999999999997654 67788999999999998654220 0000 01 1234
Q ss_pred CcEEEEccccccCCCCCc--eEEEEEe
Q 006746 326 PDFLICSFYQIFGENPSG--FGCLFVK 350 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G--~G~L~Vr 350 (632)
.++++.|+.|.+| +.| +|++++.
T Consensus 238 ~~i~~~S~SK~~~--~~G~riG~~~~~ 262 (397)
T 3fsl_A 238 PALVSNSFSKIFS--LYGERVGGLSVM 262 (397)
T ss_dssp CEEEEEECTTTTT--CGGGCCEEEEEE
T ss_pred CEEEEeccccccc--CcCCCeeEEEEe
Confidence 5688999999999 557 6877763
No 193
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.69 E-value=9.1e-16 Score=166.68 Aligned_cols=214 Identities=11% Similarity=0.040 Sum_probs=154.8
Q ss_pred hhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHH
Q 006746 99 KEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKR 178 (632)
Q Consensus 99 ~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ 178 (632)
.+|+.+ ++.++.|. ..+++++...... + .+ .+.++.+.|+... .++.+++
T Consensus 18 ~~~~~~--~~~~~~n~-------~~vl~a~~~~~~~----------~-------~~-~~~~~~~~y~~~~---~~~Le~~ 67 (409)
T 3jzl_A 18 DLQNKT--DEIAEFNQ-------AKVLDAFQENKVS----------D-------FH-FHPSTGYGYDDEG---RDTLERV 67 (409)
T ss_dssp HHHHHH--HHHHHHHH-------HHHHHHHHHTTCC----------G-------GG-GCCCCTTCTTCHH---HHHHHHH
T ss_pred HHHHHH--HHHHHhhH-------HHHHHHHHHhhhh----------h-------hc-cCCCcCCCCChhH---HHHHHHH
Confidence 357777 45667773 5677777653211 0 00 1223444455432 5678889
Q ss_pred HHHHcCCCCCCccEEE--eCCHHHHHHHHHhhCCCCCCCeEEEec--cccchhhHHHH------HHHHhcCCEEEEEecc
Q 006746 179 IMDFLNISENDYGMVF--TANRTSAFKLLAESYPFMSVKNLLTVY--DYESEAVEAMI------RTSEKRGARVMSAEFS 248 (632)
Q Consensus 179 ia~~l~a~~~ey~vvf--t~naT~al~lv~~sl~~~~gd~ilt~~--d~~s~~v~~~~------~~a~~~G~~v~~v~~~ 248 (632)
+++++|++. .+++ ++|+|+|+.+++.++ +++||+|++.. .|.. ....+. ..+++.|++++.++.+
T Consensus 68 lA~l~g~e~---alv~p~~~sGt~Ai~~al~al-l~~GD~Vl~~~~~~y~~-~~~~~~~~g~~~~~l~~~G~~~~~v~~~ 142 (409)
T 3jzl_A 68 YATVFKTEA---ALVRPQIISGTHAISTVLFGI-LRPDDELLYITGQPYDT-LEEIVGIRKQGQGSLKDFHIGYSSVPLL 142 (409)
T ss_dssp HHHHHTCSE---EEEETTSCSHHHHHHHHHHHH-CCTTCEEEECSSSCCTT-HHHHHTSSSSSSSCTGGGTCEEEECCCC
T ss_pred HHHHhCCCc---EEEECCCccHHHHHHHHHHHh-cCCCCEEEEeCCCCcHh-HHHHHhcccchhhHHHHcCCEEEEeCCC
Confidence 999999853 5665 889999999999998 78999988654 3332 221110 3456789999999987
Q ss_pred CCccccCHHHHHHHHHhcCcCCCceeEEEEec----cCCCCccccchH-HHHHHhh--CCcEEEEeccccCCCCCCCCCC
Q 006746 249 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPL----HSRMTGARYPYL-WMRIAQE--NDWHILIDACALGPKDMDSFGL 321 (632)
Q Consensus 249 ~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~----~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~g~~m~~ldl 321 (632)
+++.+|+++|+++|+++ ++++.+.. .+|+||...|++ |+++|++ +|+++++|.++..+.. ..+.
T Consensus 143 -~~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~--~~~p 213 (409)
T 3jzl_A 143 -ENGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVE--YQEP 213 (409)
T ss_dssp -TTSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTS--SCCS
T ss_pred -CCCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccc--cCCc
Confidence 57889999999998754 58999999 999999999999 9999999 9999999999877651 1222
Q ss_pred CCCCCcEEEEccccccCCCCCc---eEEEEEeCCCccccC
Q 006746 322 SLVRPDFLICSFYQIFGENPSG---FGCLFVKKSTVPILV 358 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G---~G~L~Vr~~~~~~L~ 358 (632)
..+++|+++.|++|.+|. .| .|+++.+++.++.+.
T Consensus 214 ~~~g~Div~~S~sK~lgg--~~~~~GG~v~~~~~li~~l~ 251 (409)
T 3jzl_A 214 PEVGADIIAGSLIKNPGG--GLAKTGGYIAGKEALVDLCG 251 (409)
T ss_dssp GGGTCSEEEEETTSGGGT--TTCSSCEEEEECHHHHHHHH
T ss_pred cccCCeEEEECccccCCc--cCCceEEEEEeCHHHHHHHH
Confidence 346889999999998873 23 388888877766554
No 194
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.68 E-value=5e-15 Score=159.50 Aligned_cols=214 Identities=15% Similarity=0.113 Sum_probs=140.0
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHc-CC
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL-NI 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l-~a 185 (632)
.--.|+|+.+.-..++.+.+++....... ...|+.. .-..+.|+.|++++ +.
T Consensus 43 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-------------------------~~~Y~~~--~g~~~lr~~la~~~~~~ 95 (413)
T 3t18_A 43 ALGTLLDDKGKIIALPSVYDRLDEMDRSH-------------------------IASYAPI--EGEKDYRKIVIDTLFGP 95 (413)
T ss_dssp CSCCCBCTTSCBCCCHHHHHHHHHSCHHH-------------------------HHSCCCT--TCCHHHHHHHHHHHHGG
T ss_pred cccCccCCCCCcCChHHHHHHHHhcCccc-------------------------ccCcCCC--CCCHHHHHHHHHHHhcc
Confidence 44558888888888888888876532100 0001100 00135677777755 22
Q ss_pred C--CCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHH
Q 006746 186 S--ENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKM 262 (632)
Q Consensus 186 ~--~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~ 262 (632)
. .+...|++|+|+|+|+.+++.++ .++||+|++.. .|++ ....++..|++++.++...+++.+++++|+++
T Consensus 96 ~~~~~~~~i~~t~g~~~al~~~~~~~-~~~gd~Vl~~~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~ 169 (413)
T 3t18_A 96 YKPEGYISAIATPGGTGAIRSAIFSY-LDEGDPLICHDYYWAP-----YRKICEEFGRNFKTFEFFTDDFAFNIDVYKEA 169 (413)
T ss_dssp GCCSSEEEEEEESHHHHHHHHHHHHH-CCSSCEEEEESSCCTH-----HHHHHHHHTCEEEEECCBCTTSSBCHHHHHHH
T ss_pred cCccccCcEEEcCccHHHHHHHHHHh-cCCCCEEEECCCCccc-----HHHHHHHhCCeEEEeeccCCCCCcCHHHHHHH
Confidence 1 12227999999999999999998 78999987654 4442 23445678999999998545567999999999
Q ss_pred HHhcCcCCCcee-EEEEecc-CCCCccccchH-HHHHH---h------hCCcEEEEeccccC-CCC---CCCC-C-CCCC
Q 006746 263 VVSKGKKKKQRG-LFVFPLH-SRMTGARYPYL-WMRIA---Q------ENDWHILIDACALG-PKD---MDSF-G-LSLV 324 (632)
Q Consensus 263 i~~~~~~~~~~~-Lv~~~~~-sn~TG~~~pl~-i~~~a---~------~~g~~vlvDaaq~~-g~~---m~~l-d-ls~~ 324 (632)
+++.. .++++ ++++... +|+||..+|.+ +.+++ + ++|+++++|.++.. +.+ ..++ . ....
T Consensus 170 l~~~~--~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 247 (413)
T 3t18_A 170 IDEGI--RDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNL 247 (413)
T ss_dssp HHHHH--HHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTC
T ss_pred HHHHh--hcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhc
Confidence 97520 00124 7788776 99999999988 66554 4 89999999998532 110 0011 1 1112
Q ss_pred CCc---EEEEccccccCCCCCc--eEEEEE---eCCCcccc
Q 006746 325 RPD---FLICSFYQIFGENPSG--FGCLFV---KKSTVPIL 357 (632)
Q Consensus 325 ~~D---f~~~S~hK~~G~~P~G--~G~L~V---r~~~~~~L 357 (632)
+.| +++.|++|.|| ..| +|++++ +++.++.+
T Consensus 248 ~~~~~~i~~~S~sK~~~--~~G~riG~~~~~~~~~~~~~~~ 286 (413)
T 3t18_A 248 PRNLFVVVAFSMSKSHT--AYGLRSGAAVGISSSKEIIEEF 286 (413)
T ss_dssp CTTEEEEEEEEHHHHTT--CGGGCCEEEEEEESCHHHHHHH
T ss_pred CCCeeEEEEEecCccCC--CcCcCcEEEEEecCCHHHHHHH
Confidence 334 77889999999 446 799887 56555443
No 195
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.67 E-value=1.7e-15 Score=163.87 Aligned_cols=207 Identities=11% Similarity=0.004 Sum_probs=141.7
Q ss_pred CCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHHHHcCC-
Q 006746 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI- 185 (632)
Q Consensus 107 ~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia~~l~a- 185 (632)
.--+|+|..+..+.++.+.+++.+.+..... ..|+.. .-..+.|+.++++++.
T Consensus 55 ~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~------------------------~~Y~~~--~g~~~lr~~ia~~l~~~ 108 (420)
T 4f4e_A 55 GVGVYTNEDGKIPLLRAVRDAEKARVEAGLP------------------------RGYLPI--DGIAAYDASVQKLLLGD 108 (420)
T ss_dssp CCCSCCCTTSCCCCCHHHHHHHHHHHHTCCC------------------------CCCCCT--TCCHHHHHHHHHHHHCT
T ss_pred eeeeeECCCCCccCcHHHHHHHHHHhccCCC------------------------CCCCCC--CCcHHHHHHHHHHhcCC
Confidence 4467888888888889999987654321000 001100 0113678888888754
Q ss_pred -----CCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEec-cCCccccCHH
Q 006746 186 -----SENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEF-SWPRLRINSE 257 (632)
Q Consensus 186 -----~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~-~~~~~~i~~~ 257 (632)
+++..+|++|+|+|+|+.++++.+. +.+||+|++. ..|++ ....++..|++++.++. +..++.+|.+
T Consensus 109 ~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 183 (420)
T 4f4e_A 109 DSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWEN-----HRALFDMAGFEVVAYPYYDAKTNGVNFD 183 (420)
T ss_dssp TCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHH-----HHHHHHHTTCCEEEEECEETTTTEECHH
T ss_pred CccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHh-----HHHHHHHcCCeEEEeeeeccccCccCHH
Confidence 3321169999999999999955321 5789997754 34443 23455778999999998 3346678999
Q ss_pred HHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCC-C----CCCC-CC-CCCCC
Q 006746 258 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPK-D----MDSF-GL-SLVRP 326 (632)
Q Consensus 258 ~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~-~----m~~l-dl-s~~~~ 326 (632)
+|++.|++. ++++++++++..+|+||..+|.+ |+++|+++|+++++|.+...-. + ..++ .+ ...+.
T Consensus 184 ~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 260 (420)
T 4f4e_A 184 GMLAALNGY---EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLN 260 (420)
T ss_dssp HHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred HHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCC
Confidence 999999742 13468999999999999998754 5677999999999999854321 0 0000 00 12456
Q ss_pred cEEEEccccccCCCCCc--eEEEEE
Q 006746 327 DFLICSFYQIFGENPSG--FGCLFV 349 (632)
Q Consensus 327 Df~~~S~hK~~G~~P~G--~G~L~V 349 (632)
++++.|+.|.|| +.| +|++++
T Consensus 261 ~i~~~S~SK~~~--~~G~RiG~~~~ 283 (420)
T 4f4e_A 261 VFVSSSFSKSFS--LYGERVGALSI 283 (420)
T ss_dssp EEEEEECTTTTT--CGGGCEEEEEE
T ss_pred EEEEEeCCccCc--CcCCCcEEEEE
Confidence 799999999999 557 788875
No 196
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.67 E-value=1.1e-15 Score=165.71 Aligned_cols=351 Identities=11% Similarity=0.039 Sum_probs=210.1
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|||+++. |.-++.+++++.+.+... .+... +. ......+.+++++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--------------------~~~~~----~~-~~~~~~~l~~~la 95 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKL--------------------DHLFS----EM-LSRPVVDLATRLA 95 (433)
T ss_dssp TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHC--------------------CCCCT----TC-CCHHHHHHHHHHH
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhC--------------------ccccc----cc-CCHHHHHHHHHHH
Confidence 45789998432 334788888876543211 00000 10 1245567888999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEe-ccccchhhHHHHHHHH---h-----cCCEEEEEeccC-
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTV-YDYESEAVEAMIRTSE---K-----RGARVMSAEFSW- 249 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~-~d~~s~~v~~~~~~a~---~-----~G~~v~~v~~~~- 249 (632)
++++.+++ .|+||+|+++|+.+++..+. +..+++|++. ..||......+. ... + ....+..++++.
T Consensus 96 ~~~~~~~~--~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~ 172 (433)
T 1zod_A 96 NITPPGLD--RALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAAS-ATYSAGRKGVGPAAVGSFAIPAPFT 172 (433)
T ss_dssp HHSCTTCC--EEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHH-TCCSSCCSSSCCCCTTEEEECCCCT
T ss_pred HhCCCCcC--EEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHh-hcCCccccccCCCCCCceEecCCcc
Confidence 99998765 79999999999999987542 2335677654 466652222211 100 0 012344554421
Q ss_pred ---C-------ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc-CC
Q 006746 250 ---P-------RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL-GP 313 (632)
Q Consensus 250 ---~-------~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~g 313 (632)
+ .+.+++++|+++|++.. .+++++|++..+.|.||.+.| ++ +.++|+++|+++++|.++. ++
T Consensus 173 ~~~~~~~~~~~~~~~d~~~le~~l~~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g 250 (433)
T 1zod_A 173 YRPRFERNGAYDYLAELDYAFDLIDRQS--SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVG 250 (433)
T ss_dssp TSCCCEETTEECHHHHHHHHHHHHHHHC--CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cccccCCchhhhHHHHHHHHHHHHHhcC--CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Confidence 0 01246899999987421 124678888777888999887 88 9999999999999999987 44
Q ss_pred CC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 314 KD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 314 ~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
.. +..++.....+|++++| |.||. +.++|+++++++.++.+.+.... .
T Consensus 251 ~~g~~~~~~~~~~~~di~s~s--K~~~~-G~~ig~~~~~~~~~~~~~~~~~~------------~--------------- 300 (433)
T 1zod_A 251 RTGTMFACQRDGVTPDILTLS--KTLGA-GLPLAAIVTSAAIEERAHELGYL------------F--------------- 300 (433)
T ss_dssp TTSSSSTHHHHTCCCSEEEEC--HHHHT-TSSCEEEEECHHHHHHHHHTTCC------------C---------------
T ss_pred cCchHhHHhhcCCCCCEEEec--ccccC-CCCeeEEEEhHHHHHhhccCCCC------------C---------------
Confidence 21 11112223467877554 97773 44689999998776555431000 0
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGR 471 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~ 471 (632)
.+| |. .|.+...+.. ++|+.+.+.+ +.+|++
T Consensus 301 --------~~t--~~------------~~~~~~~a~~------------------------aal~~~~~~~---~~~~~~ 331 (433)
T 1zod_A 301 --------YTT--HV------------SDPLPAAVGL------------------------RVLDVVQRDG---LVARAN 331 (433)
T ss_dssp --------CCT--TT------------TCHHHHHHHH------------------------HHHHHHHHTT---HHHHHH
T ss_pred --------CCC--CC------------cCHHHHHHHH------------------------HHHHHHHhCC---HHHHHH
Confidence 000 00 0111112222 6777766533 567788
Q ss_pred HHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC--CC--ccCHHHHHHHHHhCCcEEccCccCChH
Q 006746 472 CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK--RE--KIEPVLVQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 472 ~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~--G~--~i~~~~V~kla~~~gI~lr~G~~c~~~ 547 (632)
.+.++|++.|.++.. +.|.+..+. ..|.++.+.+.+.. +. ......+.+.+.++||.++.|..
T Consensus 332 ~~~~~l~~~l~~l~~----~~~~~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---- 398 (433)
T 1zod_A 332 VMGDRLRRGLLDLME----RFDCIGDVR-----GRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQL---- 398 (433)
T ss_dssp HHHHHHHHHHHHHHH----HCTTEEEEE-----EETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECC----
T ss_pred HHHHHHHHHHHHHHH----hCCCeEEEE-----EEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCC----
Confidence 888888888877610 013343221 24777777765310 00 01234454444468998875410
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
....+.||+|+++..|.+||+++++.|++.++
T Consensus 399 --------------------------------~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~ 430 (433)
T 1zod_A 399 --------------------------------PGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIE 430 (433)
T ss_dssp --------------------------------TTSCCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 00136899999999999999999999998875
No 197
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.65 E-value=8.8e-15 Score=162.76 Aligned_cols=316 Identities=12% Similarity=0.063 Sum_probs=191.8
Q ss_pred HHHHHHHHHc-----CCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC----eEEEe-ccccchhhHHHHHHHHhcCCEEE
Q 006746 174 AMKKRIMDFL-----NISENDYGMVFTANRTSAFKLLAESYPFMSVK----NLLTV-YDYESEAVEAMIRTSEKRGARVM 243 (632)
Q Consensus 174 ~~R~~ia~~l-----~a~~~ey~vvft~naT~al~lv~~sl~~~~gd----~ilt~-~d~~s~~v~~~~~~a~~~G~~v~ 243 (632)
+.|+.|++++ |.+.+...|++|+|+++|+.+++..+ ..+|| +|++. ..|++ + ...++..|++++
T Consensus 133 ~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~~~d~Vlv~~p~y~~----~-~~~~~~~g~~~v 206 (498)
T 3ihj_A 133 CIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKIL-VSGGGKSRTGVMIPIPQYPL----Y-SAVISELDAIQV 206 (498)
T ss_dssp HHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHH-CCCCGGGSEEEEEEESCCTH----H-HHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHH-cCCCCCCCCEEEEeCCCchh----H-HHHHHHcCCEEE
Confidence 4666666665 45333338999999999999999988 45654 77654 46653 2 334566899999
Q ss_pred EEeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccCCCCC--
Q 006746 244 SAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGPKDM-- 316 (632)
Q Consensus 244 ~v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~g~~m-- 316 (632)
.++.+.. +..+|+++|+++|++... ..+++++++...+|+||..+|.+ |+++|+++|+++++|.+.....--
T Consensus 207 ~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~ 285 (498)
T 3ihj_A 207 NYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPD 285 (498)
T ss_dssp EEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTT
T ss_pred EeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCC
Confidence 9998732 236899999999987421 12468999999999999999854 677899999999999986542100
Q ss_pred -CCCCCCCC----------CC-cEEEEcccccc-CCCCCceEEEEE---eCCCccccCCCCCCCceeecccccccccccc
Q 006746 317 -DSFGLSLV----------RP-DFLICSFYQIF-GENPSGFGCLFV---KKSTVPILVDNTSSGMVSLLPAKKQLWLTDE 380 (632)
Q Consensus 317 -~~ldls~~----------~~-Df~~~S~hK~~-G~~P~G~G~L~V---r~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~ 380 (632)
....+... .+ -+++.|+.|.| |.+...+|++.+ .+++++.+.....
T Consensus 286 ~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~------------------ 347 (498)
T 3ihj_A 286 CRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLS------------------ 347 (498)
T ss_dssp CCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHH------------------
T ss_pred CCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHh------------------
Confidence 01111110 12 26778999977 742234566664 3333322211000
Q ss_pred cCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH-HHH
Q 006746 381 FSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD-QVD 459 (632)
Q Consensus 381 ~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd-~~~ 459 (632)
... +++.+...++.. . -.++..++ ..++ ++.
T Consensus 348 ------------------~~~----------------~~~~~~q~a~~~--------~-l~~~~~g~-----~~~~~~~~ 379 (498)
T 3ihj_A 348 ------------------VRL----------------CPPVSGQAAMDI--------V-VNPPVAGE-----ESFEQFSR 379 (498)
T ss_dssp ------------------HSC----------------CCCHHHHHHHHH--------H-TCCCCTTS-----TTHHHHHH
T ss_pred ------------------ccC----------------CCCHHHHHHHHH--------H-hcCCccCc-----ccHHHHHH
Confidence 000 001111111110 0 00000000 0111 222
Q ss_pred hhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEE-EEccCCC-------CccCHHH--HHH
Q 006746 460 SLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAF-NVFDWKR-------EKIEPVL--VQK 529 (632)
Q Consensus 460 ~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaF-nv~~~~G-------~~i~~~~--V~k 529 (632)
. +..+.++.+...+++.+.|.++ |.++++.| .+++..| .+..+.+ ..+++.. +.+
T Consensus 380 ~--~~~~~~~l~~~~~~l~~~L~~~--------~g~~~~~p-----~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ 444 (498)
T 3ihj_A 380 E--KESVLGNLAKKAKLTEDLFNQV--------PGIHCNPL-----QGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMK 444 (498)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHTS--------TTEECCCC-----CBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHH
T ss_pred H--HHHHHHHHHHHHHHHHHHHhcC--------CCcEecCC-----CeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHH
Confidence 1 4566788888889999999887 66877655 4566555 3321100 0134444 578
Q ss_pred HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 530 LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 530 la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
+++++||.+..|..|.. ..+.+.+|+|++ .+.+|++.+++.|+++
T Consensus 445 ll~~~gI~v~pG~~f~~---------------------------------~~~~~~~Ris~~--~~~e~l~~~i~~L~~~ 489 (498)
T 3ihj_A 445 LLEETGICVVPGSGFGQ---------------------------------REGTYHFRMTIL--PPVEKLKTVLQKVKDF 489 (498)
T ss_dssp HHHHHCBCCEEGGGTCC---------------------------------CTTCCBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEEeCcccCC---------------------------------CCCCCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 88888999987754432 113458999995 8999999999999988
Q ss_pred hhh
Q 006746 610 LDA 612 (632)
Q Consensus 610 l~~ 612 (632)
++.
T Consensus 490 ~~~ 492 (498)
T 3ihj_A 490 HIN 492 (498)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 198
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.65 E-value=1.1e-14 Score=159.02 Aligned_cols=220 Identities=10% Similarity=0.100 Sum_probs=157.7
Q ss_pred HHHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHH
Q 006746 94 DQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLES 173 (632)
Q Consensus 94 d~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~ 173 (632)
.++| ++|+++ +..++.|+ ..+++++.+..... ++..+ .+.+.|+.. -.+
T Consensus 29 ~~~~-~~~~~~--~~i~~~n~-------~~Vl~a~~~~~~~~-----------------~~~~~-~~gy~Y~~~---g~~ 77 (427)
T 3hvy_A 29 NDVE-KEFKYY--DEIREYNQ-------LKVLKAFQEERISE-----------------SHFTN-SSGYGYNDI---GRD 77 (427)
T ss_dssp HHHH-HHHHHH--HHHHHHHH-------HHHHHHHHHTTCCG-----------------GGSCC-CCTTCTTCH---HHH
T ss_pred HHHH-HHHHHH--HHHHHhhH-------HHHHHHHHHHHHHH-----------------Hhccc-CcCCCCCch---hHH
Confidence 3444 468888 56788886 67888876643210 01112 223334432 267
Q ss_pred HHHHHHHHHcCCCCCCccEEE--eCCHHHHHHHHHhhCCCCCCCeEEEec--cccchhhHHH-------HHHHHhcCCEE
Q 006746 174 AMKKRIMDFLNISENDYGMVF--TANRTSAFKLLAESYPFMSVKNLLTVY--DYESEAVEAM-------IRTSEKRGARV 242 (632)
Q Consensus 174 ~~R~~ia~~l~a~~~ey~vvf--t~naT~al~lv~~sl~~~~gd~ilt~~--d~~s~~v~~~-------~~~a~~~G~~v 242 (632)
+.++++++++|++. .+++ ++|+|+|+.+++.++ +++||+|++.. .|+. ....+ ...++..|+++
T Consensus 78 ~Le~~lA~l~g~e~---alv~p~~~sGt~A~~~al~al-l~pGD~Vl~~~~~~y~~-~~~~~g~~~~~~~~~l~~~G~~~ 152 (427)
T 3hvy_A 78 SLDRVYANIFNTES---AFVRPHFVNGTHAIGAALFGN-LRPNDTMMSICGMPYDT-LHDIIGMDDSKKVGSLREYGVKY 152 (427)
T ss_dssp HHHHHHHHHHTCSE---EEEETTCCSHHHHHHHHHHHT-CCTTCEEEECSSSCCGG-GHHHHTCCTTCCSCCTGGGTCEE
T ss_pred HHHHHHHHHhCCCc---eEEeCCCCcHHHHHHHHHHHh-cCCCCEEEEeCCCCchh-HHHHhccccchhhhHHHHcCCEE
Confidence 88899999999863 4665 789999999999998 89999988654 3432 22111 03346689999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEec----cCCCCccccchH-HHHHHhh--CCcEEEEeccccCCC-
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPL----HSRMTGARYPYL-WMRIAQE--NDWHILIDACALGPK- 314 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~----~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~g~- 314 (632)
+.++. +++.+|.++|++++++. ++++++++.+ .+|+||...|++ |+++|++ +|++++||.++..+.
T Consensus 153 ~~v~~--~~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~ 226 (427)
T 3hvy_A 153 KMVDL--KDGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVE 226 (427)
T ss_dssp EECCC--BTTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTS
T ss_pred EEecC--CCCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcccccc
Confidence 99987 46779999999999831 1359999999 999999999999 9999999 899999999987765
Q ss_pred CCCCCCCCCCCCcEEEEccccccCCC--CCceEEEEEeCCCccccCC
Q 006746 315 DMDSFGLSLVRPDFLICSFYQIFGEN--PSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 315 ~m~~ldls~~~~Df~~~S~hK~~G~~--P~G~G~L~Vr~~~~~~L~~ 359 (632)
...++ .+++|+++.|+||.+|.+ |. .|+++.+++.++.+..
T Consensus 227 ~~~p~---~~gaDiv~~S~sK~lgg~g~~~-GG~i~~~~~li~~l~~ 269 (427)
T 3hvy_A 227 EKEPT---DVGADIIAGSLIKNIGGGIATT-GGYIAGKEEYVTQATF 269 (427)
T ss_dssp SSCGG---GGTCSEEEEETTSGGGTTTCCS-CEEEEECHHHHHHHHH
T ss_pred CCCCc---ccCCeEEEECCcccccccccce-EEEEEECHHHHHHHHH
Confidence 21233 357899999999988821 22 3888888777665543
No 199
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.65 E-value=6.3e-15 Score=165.31 Aligned_cols=165 Identities=13% Similarity=0.139 Sum_probs=119.1
Q ss_pred HHHHHHHHHc----C--CCCC-CccEEEeCCHHHHHHHHHhhC----CCCCCCeEEEec-cccchhhHHHHHHHHhcCCE
Q 006746 174 AMKKRIMDFL----N--ISEN-DYGMVFTANRTSAFKLLAESY----PFMSVKNLLTVY-DYESEAVEAMIRTSEKRGAR 241 (632)
Q Consensus 174 ~~R~~ia~~l----~--a~~~-ey~vvft~naT~al~lv~~sl----~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~ 241 (632)
+.|+.+++++ + .+.. +.+|++|+|+|+|+.+++.++ -+++||+|++.. .|++ ....++..|++
T Consensus 142 ~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~-----~~~~~~~~g~~ 216 (533)
T 3f6t_A 142 NTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP-----YLRIPELKDYE 216 (533)
T ss_dssp HHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHH-----HHTSGGGGGSE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHH-----HHHHHHHcCCe
Confidence 4556666655 2 2221 237999999999999999983 378999987654 5543 23345667999
Q ss_pred EEEEeccC---CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHh-hCCcEEEEeccccCC
Q 006746 242 VMSAEFSW---PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQ-ENDWHILIDACALGP 313 (632)
Q Consensus 242 v~~v~~~~---~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~-~~g~~vlvDaaq~~g 313 (632)
++.++++. .+..+++++|+++++++ ++++++.+.+|+||..+|.+ + +++|+ ++|+++++|.++..-
T Consensus 217 ~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~ 290 (533)
T 3f6t_A 217 LVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAF 290 (533)
T ss_dssp EEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGG
T ss_pred EEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcccc
Confidence 99998852 34678999999988653 58999999999999999886 5 45666 689999999986531
Q ss_pred CCCCCCCCC--CCCCcEEEEccccccCCCCCc--eEEEEEeCC
Q 006746 314 KDMDSFGLS--LVRPDFLICSFYQIFGENPSG--FGCLFVKKS 352 (632)
Q Consensus 314 ~~m~~ldls--~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr~~ 352 (632)
.. ....+. ..+.++++.|++|.+| ++| +|+++++++
T Consensus 291 ~~-~~~~~~~~~~~~~i~~~S~SK~~g--~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 291 VP-NFKSIYSVVPYNTMLVYSYSKLFG--CTGWRLGVIALNEK 330 (533)
T ss_dssp ST-TCCCHHHHSGGGEEEEEESHHHHT--CGGGCEEEEEEESS
T ss_pred cc-CccCHhhcCCCCEEEEecCcccCC--CcccceEEEEECcH
Confidence 10 111111 1234699999999999 568 899999987
No 200
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.64 E-value=1.1e-14 Score=158.82 Aligned_cols=173 Identities=14% Similarity=0.106 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE--eCCHHHHHHHHHhhCCCCCCCeEEEec--cccchhhHHH-------HHHHHhcCC
Q 006746 172 ESAMKKRIMDFLNISENDYGMVF--TANRTSAFKLLAESYPFMSVKNLLTVY--DYESEAVEAM-------IRTSEKRGA 240 (632)
Q Consensus 172 ~~~~R~~ia~~l~a~~~ey~vvf--t~naT~al~lv~~sl~~~~gd~ilt~~--d~~s~~v~~~-------~~~a~~~G~ 240 (632)
.++.++++++++|++. .++| ++|+|+|+.+++.++ +++||+|++.. .|.. ....+ ...++..|+
T Consensus 75 ~~~Le~~lA~l~g~e~---alv~p~~~sGt~Ai~~al~al-l~pGD~Vl~~~~~~y~~-~~~~~g~~~~~~~~~l~~~G~ 149 (427)
T 3i16_A 75 RDSLDAVYARVFNTES---ALVRPHFVNGTHALGAALFGN-LRPGNTMLSVCGEPYDT-LHDVIGITENSNMGSLKEFGI 149 (427)
T ss_dssp HHHHHHHHHHHHTCSE---EEEETTCCSHHHHHHHHHHHH-CCTTCEEEESSSSCCGG-GHHHHTCSCCCSSCCTGGGTC
T ss_pred HHHHHHHHHHHhCCcc---eEEeCCCccHHHHHHHHHHHH-hCCCCEEEEeCCCccHH-HHHHHhccccchHHHHHHcCC
Confidence 5678889999999963 4776 889999999999988 78999988664 3432 22221 034467899
Q ss_pred EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEec----cCCCCccccchH-HHHHHhh--CCcEEEEeccccCC
Q 006746 241 RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPL----HSRMTGARYPYL-WMRIAQE--NDWHILIDACALGP 313 (632)
Q Consensus 241 ~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~----~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~g 313 (632)
+++.++.+ +++.+|.++|++++++. .+++++++.. .+|+||...|++ |+++|++ +|++++||.++..+
T Consensus 150 ~~~~v~~~-~~g~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~ 224 (427)
T 3i16_A 150 NYKQVDLK-EDGKPNLEEIEKVLKED----ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEF 224 (427)
T ss_dssp EEEECCCC-TTSSCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTT
T ss_pred EEEEecCc-cCCCcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccc
Confidence 99999987 56789999999999831 1359999999 899999999999 9999999 99999999998776
Q ss_pred C-CCCCCCCCCCCCcEEEEccccccCCCC---CceEEEEEeCCCccccCC
Q 006746 314 K-DMDSFGLSLVRPDFLICSFYQIFGENP---SGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 314 ~-~m~~ldls~~~~Df~~~S~hK~~G~~P---~G~G~L~Vr~~~~~~L~~ 359 (632)
. ...++ .+++|+++.|+||.+| + ...|+++.+++.++.+..
T Consensus 225 ~~~~~p~---~~gaDiv~~S~sK~lg--g~g~~~gG~i~~~~~li~~l~~ 269 (427)
T 3i16_A 225 MDTKEPT---DVGADLIAGSLIKNIG--GGIAPTGGYLAGTKDCIEKTSY 269 (427)
T ss_dssp SSSSCGG---GGTCSEEEEETTSGGG--TTTCCSCEEEEECHHHHHHHHH
T ss_pred cccCCcc---ccCCeEEEecCcccCC--CCCCceEEEEEECHHHHHHHHH
Confidence 5 11233 3578999999999888 4 234899988877765543
No 201
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.64 E-value=7.1e-14 Score=152.77 Aligned_cols=356 Identities=10% Similarity=0.085 Sum_probs=208.9
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||.++. |.-++.+++++.+.+.... .... + -..+...+.+++++
T Consensus 47 ~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~--------------------~~~~----~-~~~~~~~~la~~l~ 101 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLS--------------------YFPM----S-QSHEPAIKLAEKLN 101 (452)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCC--------------------CCCT----T-SEEHHHHHHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcC--------------------Cccc----c-cCCHHHHHHHHHHH
Confidence 56779998765 3447888888765443210 0000 0 02356678899999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-C---C---CCCeEEE-eccccchhhHHHHHHH---Hh-----cCCEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-F---M---SVKNLLT-VYDYESEAVEAMIRTS---EK-----RGARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~---~---~gd~ilt-~~d~~s~~v~~~~~~a---~~-----~G~~v~~ 244 (632)
++++.+. .|+||+|+|+|+..++..+. + . ++++|++ ...||......+.... .+ ....+..
T Consensus 102 ~~~~~~~---~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (452)
T 3n5m_A 102 EWLGGEY---VIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLH 178 (452)
T ss_dssp HHHTSCE---EEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEE
T ss_pred HhCCCCc---eEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeE
Confidence 9998754 29999999999999887752 1 3 5677664 4566653222211000 00 0112444
Q ss_pred EeccCCccc------------cCHHHHHHHHHhcCcCCCceeEEEEecc-CCCCccccc----hH-HHHHHhhCCcEEEE
Q 006746 245 AEFSWPRLR------------INSEKLRKMVVSKGKKKKQRGLFVFPLH-SRMTGARYP----YL-WMRIAQENDWHILI 306 (632)
Q Consensus 245 v~~~~~~~~------------i~~~~l~~~i~~~~~~~~~~~Lv~~~~~-sn~TG~~~p----l~-i~~~a~~~g~~vlv 306 (632)
++.. ...+ .+.++|+++|++.. ..++++|++..+ +| ||.+.| ++ |.++|+++|+++++
T Consensus 179 ~~~~-~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~ 254 (452)
T 3n5m_A 179 VTPP-DCYRMPGIERENIYDVECVKEVDRVMTWEL--SETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLIS 254 (452)
T ss_dssp ECCC-CTTTSTTTTTSCGGGCHHHHHHHHHHHHHC--GGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred eCCC-ccccCccCCchhhHHHHHHHHHHHHHHhcC--CCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEE
Confidence 4431 0001 11789999997211 124688888888 89 999998 89 99999999999999
Q ss_pred ecccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCC
Q 006746 307 DACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 307 Daaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~ 383 (632)
|-++. ++.. +...+.....+|++++| |.+|.++..+|++++++++++.+.+....+. +.
T Consensus 255 DEv~~g~g~~g~~~~~~~~~~~~di~t~s--K~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~---------~~------- 316 (452)
T 3n5m_A 255 DEVICGFGRTGKAFGFMNYDVKPDIITMA--KGITSAYLPLSATAVKREIYEAFKGKGEYEF---------FR------- 316 (452)
T ss_dssp ECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCCEEEEEEHHHHGGGCSSSTTCS---------CC-------
T ss_pred ecchhCCCcccccchhhhcCCCCCEEeec--ccccCCCcceEEEEECHHHHHHHhhccCCCC---------cc-------
Confidence 99876 3321 11223333468888765 9666312568999999988776643100000 00
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCH
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 463 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl 463 (632)
..+| |. .|.....+.. ++|+.+.+
T Consensus 317 ---------------~~~t--~~------------~~~~~~aaa~------------------------aal~~~~~--- 340 (452)
T 3n5m_A 317 ---------------HINT--FG------------GNPAACALAL------------------------KNLEIIEN--- 340 (452)
T ss_dssp ---------------CCCS--ST------------TCHHHHHHHH------------------------HHHHHHHH---
T ss_pred ---------------ccCC--CC------------CCHHHHHHHH------------------------HHHHHHHh---
Confidence 0011 00 0111111111 56666654
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCC--CCccCH---HHHHHHHHhCCcEE
Q 006746 464 TMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWK--REKIEP---VLVQKLADRENISL 538 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~--G~~i~~---~~V~kla~~~gI~l 538 (632)
+.+.++++.+.+++++.|.++.. +.|.+...- ..|.++.+.+.+.. .+.++. ..+.+.+.++||.+
T Consensus 341 ~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 411 (452)
T 3n5m_A 341 ENLIERSAQMGSLLLEQLKEEIG----EHPLVGDIR-----GKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLII 411 (452)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHT----TCTTEEEEE-----ESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEEC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEE-----EEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEE
Confidence 34456677777777777766511 114343321 24666666664311 111112 24555555679998
Q ss_pred ccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 539 SYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 539 r~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
+.+..+.. ...+.||+++++..|.|||+++++.|+++++
T Consensus 412 ~~~~~~~~----------------------------------~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 412 GRNGMTTA----------------------------------GYNNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp EECTTSST----------------------------------TCCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred eecCcccC----------------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 86532211 1246999999999999999999999999875
No 202
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.64 E-value=2.5e-15 Score=158.26 Aligned_cols=170 Identities=14% Similarity=0.092 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCe--EEEeccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKN--LLTVYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~--ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
...++.|+++++++|.+. .+|++|+|+|+.+++..+ ..+|++ |++...+|...... ...+...|++++.++.
T Consensus 48 ~~~~~l~~~la~~~~~~~----~i~~~~g~~a~~~a~~~~-~~~g~~~vvi~~~~~~~~~~~~-~~~~~~~g~~~~~v~~ 121 (359)
T 3pj0_A 48 AVIEDFETKIAKILGKQS----AVFFPSGTMAQQIALRIW-ADRKENRRVAYHPLSHLEIHEQ-DGLKELQQITPLLLGT 121 (359)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHH-HHHHTCCEEEECTTCHHHHSST-THHHHHHCCEEEECSC
T ss_pred HHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHH-HhcCCCcEEEEeccceeeehhc-chHHHhcCceEEecCC
Confidence 456789999999999863 366789999999998887 456776 44443333211111 1122446999988876
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-ccccchH-H---HHHHhhCCcEEEEeccccCCC----CCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYPYL-W---MRIAQENDWHILIDACALGPK----DMDS 318 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~pl~-i---~~~a~~~g~~vlvDaaq~~g~----~m~~ 318 (632)
+++.+|+++|+++ .+ ++++|.+...+|.+ |..+|.+ + +++|+++|+++++|+++..+. ....
T Consensus 122 --~~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~ 192 (359)
T 3pj0_A 122 --ANQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSA 192 (359)
T ss_dssp --TTSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCH
T ss_pred --cCCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCH
Confidence 4567899999876 32 35899998887777 7999977 6 889999999999999865421 0011
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
.++. ...|+++.|++|.+|. |.| |+++.+++.++.+
T Consensus 193 ~~~~-~~~d~~~~s~sK~~~~-~~g-g~~~~~~~l~~~~ 228 (359)
T 3pj0_A 193 EEIC-ALFDSVYVSFYKGIGG-IAG-AILAGNDDFVQEA 228 (359)
T ss_dssp HHHH-TTCSEEEEESSSTTCC-SSC-EEEEECHHHHHHH
T ss_pred HHhh-ccCCEEEEeccccCCC-cce-EEEECCHHHHHHH
Confidence 1111 3679999999997775 766 8877777766544
No 203
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.64 E-value=1.9e-14 Score=156.07 Aligned_cols=358 Identities=14% Similarity=0.035 Sum_probs=198.0
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||+.+. |.-++.+++++.+.+..... | .+. . + ..+...+.+++++
T Consensus 27 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-----~-------------~~~-~---~--~~~~~~~l~~~la 82 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPF-----V-------------HGS-Q---F--SSDVLEEYAGRLA 82 (430)
T ss_dssp TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCC-----C-------------CTT-T---C--EEHHHHHHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhccc-----c-------------ccc-c---c--CCHHHHHHHHHHH
Confidence 45679998763 33388888886653321100 0 000 0 0 2355668889999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-------CCCCeEEE-eccccchhhHHHHHHHHhcC---------C--E
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF-------MSVKNLLT-VYDYESEAVEAMIRTSEKRG---------A--R 241 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~-------~~gd~ilt-~~d~~s~~v~~~~~~a~~~G---------~--~ 241 (632)
++++.+++ .|+||+++++|+.+++..+-. ..+++|++ ...||...... ........ . .
T Consensus 83 ~~~~~~~~--~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~ 159 (430)
T 3i4j_A 83 RFVGLPTF--RFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGS-LAASGMGARRELYTPLMRPEA 159 (430)
T ss_dssp HHTTCTTC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC--------------------------CGGG
T ss_pred HhCCCCCC--EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCccc-ccccCccccccccCCcCCCCC
Confidence 99998765 799999999999998877521 23566664 44566421111 11100000 0 2
Q ss_pred EEEEeccCC--ccccCHHHHHHHHHhcCcCCCceeEEEEeccCC-CCccccc----hH-HHHHHhhCCcEEEEecccc-C
Q 006746 242 VMSAEFSWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSR-MTGARYP----YL-WMRIAQENDWHILIDACAL-G 312 (632)
Q Consensus 242 v~~v~~~~~--~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn-~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~ 312 (632)
+..++.+.. .+..+.++|+++|++.. .+.+.+|++..+.+ .+|.+.| ++ |.++|+++|+++++|-++. +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~ 237 (430)
T 3i4j_A 160 WPKLPKPDPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGM 237 (430)
T ss_dssp SCEECCCCTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred ceEcCCCcccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 333333210 02235688888887421 12457888878888 9999888 88 9999999999999999876 3
Q ss_pred CCC--CCCCCCC-CCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 313 PKD--MDSFGLS-LVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 313 g~~--m~~ldls-~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
+.. +..++.- ...+|++++| |.+|. . -.+|++++++++++.+.+.. +.. .
T Consensus 238 ~~~g~~~~~~~~~~~~~di~t~s--K~l~~-G~~r~G~~~~~~~i~~~~~~~~--~~~---------~------------ 291 (430)
T 3i4j_A 238 GRCGSPLALSRWSGVTPDIAVLG--KGLAA-GYAPLAGLLAAPQVYETVMGGS--GAF---------M------------ 291 (430)
T ss_dssp TTTSSSSGGGGTTTCCCSEEEEC--GGGTT-TSSCCEEEEECHHHHHHHHHTT--CBC---------C------------
T ss_pred CcccchhhhhhhcCCCCcEEEEc--ccccC-CccccEEEEECHHHHHHHhccC--Ccc---------c------------
Confidence 321 1112222 3457888766 98882 1 23799999888766554320 000 0
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
..+| |. .|.....+. .++|+.+.. +.+.+
T Consensus 292 ----------~~~t--~~------------~~~~~~aaa------------------------~aal~~~~~---~~~~~ 320 (430)
T 3i4j_A 292 ----------HGFT--YA------------GHPVSVAAG------------------------LSVLDIVER---EDLTG 320 (430)
T ss_dssp ----------CCCT--TT------------TCHHHHHHH------------------------HHHHHHHHH---TTHHH
T ss_pred ----------ccCC--CC------------CCHHHHHHH------------------------HHHHHHHHc---ccHHH
Confidence 0000 00 011111111 156666654 23445
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC-c----cCHHHHHHHHHhCCcEEccCcc
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE-K----IEPVLVQKLADRENISLSYGSL 543 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~-~----i~~~~V~kla~~~gI~lr~G~~ 543 (632)
+++.+.+++++.|.++.. ..|.+..+- ..|..+.+.+.+.+.. . -....+.+.+.++||.++.+..
T Consensus 321 ~~~~~~~~~~~~l~~~~~----~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 391 (430)
T 3i4j_A 321 AAKERGAQLLAGLQALQA----RFPQMMQVR-----GTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSG 391 (430)
T ss_dssp HHHHHHHHHHHHHHHHHH----HCTTEEEEE-----EETTEEEEEEC------------CHHHHHHHHHHTTEECC----
T ss_pred HHHHHHHHHHHHHHHHHH----hCCCeEEEE-----EEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEeccc
Confidence 555555555555555410 014454332 2467778877643210 0 0124455555578999875421
Q ss_pred CChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 544 HHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 544 c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
... +.+.+.||+++++..|.||++++++.|+++++.
T Consensus 392 ~~~---------------------------------~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 392 AEP---------------------------------NGRGDHLLLGPPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp ----------------------------------------CEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccC---------------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 110 112458999999999999999999999998864
No 204
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.63 E-value=6.9e-14 Score=153.54 Aligned_cols=222 Identities=14% Similarity=0.132 Sum_probs=137.3
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..+. |.-++.+++++.+.+..... .... .+. ..+...+.+++++
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~------------------~~~~----~~~-~~~~~~~la~~l~ 105 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAY------------------YHAY----VGH-GTEASITLAKMII 105 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSC------------------CCCC----TTC-CCHHHHHHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc------------------cccc----ccc-CCHHHHHHHHHHH
Confidence 56779998754 44478888886553321100 0000 000 1245668899999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-------CCCCeEEE-eccccchhhHHHHHH--------HHhcCCEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF-------MSVKNLLT-VYDYESEAVEAMIRT--------SEKRGARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~-------~~gd~ilt-~~d~~s~~v~~~~~~--------a~~~G~~v~~ 244 (632)
++++.+.+ .|+||+|+|+|+..++..+.- ..+++|++ ...||......+.-. ....+..+..
T Consensus 106 ~~~~~~~~--~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (460)
T 3gju_A 106 DRAPKGMS--RVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLH 183 (460)
T ss_dssp HHSCTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEE
T ss_pred hhCCCCcC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEE
Confidence 99877654 799999999999998877621 23466664 456665332221100 0011224555
Q ss_pred EeccC----CccccC--------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEe
Q 006746 245 AEFSW----PRLRIN--------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILID 307 (632)
Q Consensus 245 v~~~~----~~~~i~--------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvD 307 (632)
++... ++...+ .++|+++|.+.. .+++++|++..+.+.+|.+.| ++ |.++|+++|+++++|
T Consensus 184 ~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D 261 (460)
T 3gju_A 184 TEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVAD 261 (460)
T ss_dssp ECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred eCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 65431 111122 578888887421 124688999889999999887 88 999999999999999
Q ss_pred cccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccC
Q 006746 308 ACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILV 358 (632)
Q Consensus 308 aaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~ 358 (632)
-++. +|.. +...+.....||++++| |.+|. . ..+|++++++++++.+.
T Consensus 262 Ev~~g~gr~g~~~~~~~~~~~pdi~t~s--K~l~g-G~~~lg~v~~~~~i~~~~~ 313 (460)
T 3gju_A 262 EVVTGFGRLGTMFGSDHYGIKPDLITIA--KGLTS-AYAPLSGVIVADRVWQVLV 313 (460)
T ss_dssp CTTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTT-TSSCCEEEEEEHHHHHHHH
T ss_pred ccccCCCcccccchHhhcCCCCCeeeee--hhhcC-CCCCeEEEEECHHHHHHHh
Confidence 9876 3321 11112223468988766 97762 2 24799999988776553
No 205
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.63 E-value=6.1e-14 Score=154.88 Aligned_cols=340 Identities=13% Similarity=0.109 Sum_probs=198.1
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccc-hhHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ-ESGLESAMKKRI 179 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~-~~~~~~~~R~~i 179 (632)
+++.|||+++ .|.-++.+++++.+.+.... + .+.. .||.. ..++.+++.+++
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~------------~------~~~~---~~~~~~~~~l~~~la~~l 119 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVST------------F------INRP---ALGILPPENFVEKLRESL 119 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHH------------H------HCCC---CTTTSCBTTHHHHHHHTG
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcc------------c------cccc---ccccccHHHHHHHHHHHH
Confidence 6788999854 35568889998776432100 0 0000 01210 124445555556
Q ss_pred HHHcCCCCCCccEEEeCCHHHHHHHHHhhCC------------CC------------CC---CeEEE-eccccchhhHHH
Q 006746 180 MDFLNISENDYGMVFTANRTSAFKLLAESYP------------FM------------SV---KNLLT-VYDYESEAVEAM 231 (632)
Q Consensus 180 a~~l~a~~~ey~vvft~naT~al~lv~~sl~------------~~------------~g---d~ilt-~~d~~s~~v~~~ 231 (632)
+++++.+.+ .|+||+++|+|+..++.... +. +| ++|++ ...||......+
T Consensus 120 ~~~~~~~~~--~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~ 197 (472)
T 1ohv_A 120 LSVAPKGMS--QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCL 197 (472)
T ss_dssp GGGCCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHH
T ss_pred HHhCCCCcC--EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHH
Confidence 666654443 79999999999998886551 11 35 66664 446776434332
Q ss_pred HHH----HHhcCCEE---EEEeccC---Ccc----------ccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc-
Q 006746 232 IRT----SEKRGARV---MSAEFSW---PRL----------RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP- 290 (632)
Q Consensus 232 ~~~----a~~~G~~v---~~v~~~~---~~~----------~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p- 290 (632)
.-. .+..|..+ ..+++.. +.. ..++++|+++|++......++++|++..+.+.+|.+.|
T Consensus 198 ~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~ 277 (472)
T 1ohv_A 198 ATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHAS 277 (472)
T ss_dssp HHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCC
T ss_pred hcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCC
Confidence 110 01223221 1233310 100 12578888888752100014689999888888999988
Q ss_pred ---hH-HHHHHhhCCcEEEEecccc-CCCCCCC-CCCCCCC----CcEEEEccccc-cCCCCCceEEEEEeCCCccccCC
Q 006746 291 ---YL-WMRIAQENDWHILIDACAL-GPKDMDS-FGLSLVR----PDFLICSFYQI-FGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 291 ---l~-i~~~a~~~g~~vlvDaaq~-~g~~m~~-ldls~~~----~Df~~~S~hK~-~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
++ |.++|+++|+++++|.+|. +|.. .. +.+..++ ||++++| |. +| | |++ +++.+ ..+.+
T Consensus 278 ~~~l~~l~~l~~~~g~lli~DEv~~g~g~~-g~~~~~~~~gv~~~~Di~t~s--K~~l~----G-G~~-~~~~~-~~~~~ 347 (472)
T 1ohv_A 278 DDFFRKLRDISRKHGCAFLVDEVQTGGGST-GKFWAHEHWGLDDPADVMTFS--KKMMT----G-GFF-HKEEF-RPNAP 347 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTTTTT-SSSSGGGGGCCSSCCSEEEEC--GGGSS----E-EEE-ECGGG-SCSSS
T ss_pred HHHHHHHHHHHHHhCCEEEEeCcccCCCCC-CCchhccccCCCCCCCEEEEc--ccccc----C-Ccc-Cchhh-ccccc
Confidence 88 9999999999999999997 3431 11 2333334 8998777 96 55 3 544 44332 11111
Q ss_pred CCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhc
Q 006746 360 NTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKN 439 (632)
Q Consensus 360 ~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~ 439 (632)
... .+| |. .|.+...+..
T Consensus 348 ~~~-------------------------------------~~T--~~------------~~~~~~aaa~----------- 365 (472)
T 1ohv_A 348 YRI-------------------------------------FNT--WL------------GDPSKNLLLA----------- 365 (472)
T ss_dssp SSS-------------------------------------CCS--SS------------SCHHHHHHHH-----------
T ss_pred ccc-------------------------------------cCc--cC------------ccHHHHHHHH-----------
Confidence 110 111 00 1112222222
Q ss_pred cCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCCCcEEEECCCCCCCCCcEEEEEEccC
Q 006746 440 ANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL--QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDW 517 (632)
Q Consensus 440 ~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l--~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~ 517 (632)
++|+.+.+. .+.+|.+.+.++|++.|.++ +++. .+.-. ...|.++.|.+.+.
T Consensus 366 -------------aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~-----~v~~~-----~~~g~~~~~~~~~~ 419 (472)
T 1ohv_A 366 -------------EVINIIKRE---DLLSNAAHAGKVLLTGLLDLQARYPQ-----FISRV-----RGRGTFCSFDTPDE 419 (472)
T ss_dssp -------------HHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTT-----TCEEE-----EEETTEEEEECSSH
T ss_pred -------------HHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhhCCC-----cEEee-----cCCceEEEEEeCCh
Confidence 677777653 45788999999999999887 2321 12111 12467888765431
Q ss_pred CCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHH
Q 006746 518 KREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFE 597 (632)
Q Consensus 518 ~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~e 597 (632)
.....+.+.+.++||.++.+ +.++||+|+++.+|.+
T Consensus 420 ----~~~~~~~~~l~~~Gv~~~~~----------------------------------------g~~~iRi~~~~~~t~e 455 (472)
T 1ohv_A 420 ----SIRNKLISIARNKGVMLGGC----------------------------------------GDKSIRFRPTLVFRDH 455 (472)
T ss_dssp ----HHHHHHHHHHHHTTEECEEE----------------------------------------TTTEEEECCCTTCCHH
T ss_pred ----hHHHHHHHHHHHCCeEEecC----------------------------------------CCCEEEEECCCCCCHH
Confidence 12334444344578876521 2359999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 006746 598 DVYRLWAFVAQFLD 611 (632)
Q Consensus 598 DV~rlv~~l~~~l~ 611 (632)
||+++++.|++++.
T Consensus 456 ~i~~~~~~l~~~l~ 469 (472)
T 1ohv_A 456 HAHLFLNIFSDILA 469 (472)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998875
No 206
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.63 E-value=4.1e-14 Score=153.80 Aligned_cols=345 Identities=11% Similarity=0.070 Sum_probs=206.2
Q ss_pred CCceEeecCCCCC------CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIGL------FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~gl------~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+.-|||+++.-. -++.+++++.+.+.... .. . +..-..+...+.+++++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--------~~---------~-------~~~~~~~~~~~l~~~la 96 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPA--------GA---------T-------ILSASNAPAVTLAERLL 96 (439)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCS--------CS---------C-------SSSSEEHHHHHHHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc--------Cc---------c-------ccccCCHHHHHHHHHHH
Confidence 4577999886544 67888888665432210 00 0 00012356778999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHHHHHhcCCE--------------EEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIRTSEKRGAR--------------VMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~~--------------v~~ 244 (632)
++++...+ ..|+||+|+|+|+..++.... +.++++|+ ....||......+ .. .|.. +..
T Consensus 97 ~~~~~~~~-~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~ 171 (439)
T 3dxv_A 97 ASFPGEGT-HKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSM-AF---SGHSVQADAAKADGLILLPYP 171 (439)
T ss_dssp HTTTCTTT-EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH-CC----------------CEEEECCC
T ss_pred HhCCCCCC-CEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHH-hh---cCCCchhhccccCCCCCCcEE
Confidence 99976541 279999999999999988731 12455655 4556665322221 11 1111 122
Q ss_pred EeccCCcccc-----CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-C
Q 006746 245 AEFSWPRLRI-----NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-P 313 (632)
Q Consensus 245 v~~~~~~~~i-----~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g 313 (632)
++.+. .... ++++|+++|... ...++++|++..+.+.+|...| ++ |.++|+++|+++++|.++.. +
T Consensus 172 ~~~~~-~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g 248 (439)
T 3dxv_A 172 DPYRP-YRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLA 248 (439)
T ss_dssp CSSSC-BTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTT
T ss_pred cCCCc-ccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 23221 1111 588999998521 1235688999999999999999 99 99999999999999998762 2
Q ss_pred CC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcccc
Q 006746 314 KD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQT 391 (632)
Q Consensus 314 ~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~ 391 (632)
.. +..++.....+|++ ++-|.+|. ...+|+++.+++.++.+.+...+
T Consensus 249 ~~g~~~~~~~~~~~~di~--s~sK~~~~-G~riG~~~~~~~~~~~~~~~~~~---------------------------- 297 (439)
T 3dxv_A 249 RSGRLHCFEHEGFVPDIL--VLGKGLGG-GLPLSAVIAPAEILDCASAFAMQ---------------------------- 297 (439)
T ss_dssp TTSSSSGGGGTTCCCSEE--EECGGGGT-TSCCEEEEEEHHHHTSCSSSSCC----------------------------
T ss_pred cCchhhHHHhcCCCCCEE--EEcchhcC-CcceEEEEECHHHHhhhcCCCcC----------------------------
Confidence 11 11223333468887 56698873 23479999998877655442111
Q ss_pred chhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHH
Q 006746 392 SKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGR 471 (632)
Q Consensus 392 ~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~ 471 (632)
+|. ..+++ ..+. .++|+.+.+ +.+.++++
T Consensus 298 ---------~t~--~~~~~-------------~~aa------------------------~aal~~~~~---~~~~~~~~ 326 (439)
T 3dxv_A 298 ---------TLH--GNPIS-------------AAAG------------------------LAVLETIDR---DDLPAMAE 326 (439)
T ss_dssp ---------TTT--TCHHH-------------HHHH------------------------HHHHHHHHH---TTHHHHHH
T ss_pred ---------CCc--ccHHH-------------HHHH------------------------HHHHHHHHh---cCHHHHHH
Confidence 000 00111 1111 156665554 34556677
Q ss_pred HHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC----ccCHHHHHHHHHhCCcEEccCccCChH
Q 006746 472 CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE----KIEPVLVQKLADRENISLSYGSLHHIW 547 (632)
Q Consensus 472 ~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~----~i~~~~V~kla~~~gI~lr~G~~c~~~ 547 (632)
.+.+++++.|.++... .|.+.... ..|.++.+.+.+.... ......+.+.+.++||.++.|.
T Consensus 327 ~~~~~~~~~l~~~~~~----~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----- 392 (439)
T 3dxv_A 327 RKGRLLRDGLSELAKR----HPLIGDIR-----GRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVG----- 392 (439)
T ss_dssp HHHHHHHHHHHHHHHH----CTTEEEEE-----EETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEES-----
T ss_pred HHHHHHHHHHHHHHHh----CCCeEEEE-----EEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecC-----
Confidence 7777777777665100 13343321 2577777776431110 0123334444444588876441
Q ss_pred HHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 548 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 548 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...+.||+++++..|.+|++++++.|+++++.
T Consensus 393 ---------------------------------~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 393 ---------------------------------MNGNVLEFTPPLTITETDIHKALDLLDRAFSE 424 (439)
T ss_dssp ---------------------------------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12368999999999999999999999998864
No 207
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.63 E-value=3.8e-14 Score=155.52 Aligned_cols=222 Identities=12% Similarity=0.092 Sum_probs=137.1
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||.++. |.-++.+++++.+.+..... ..... + -..+...+.+++++
T Consensus 48 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~------------------~~~~~----~-~~~~~~~~la~~l~ 104 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPF------------------YNTFF----K-TTHPAVVELSSLLA 104 (459)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSC------------------CCTTS----S-SCCHHHHHHHHHHH
T ss_pred CCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccc------------------ccccc----c-cCCHHHHHHHHHHH
Confidence 56789998764 44478888886654321100 00000 0 02355678899999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-------CCCCeEEE-eccccchhhHHHHHH--------HHhcCCEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF-------MSVKNLLT-VYDYESEAVEAMIRT--------SEKRGARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~-------~~gd~ilt-~~d~~s~~v~~~~~~--------a~~~G~~v~~ 244 (632)
++++.+.+ .|+||+|+|+|+..++..+-. ..+++|++ ...||......+.-. .......+..
T Consensus 105 ~~~~~~~~--~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (459)
T 4a6r_A 105 EVTPAGFD--RVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAH 182 (459)
T ss_dssp HHSCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEE
T ss_pred HhCCCCCC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEE
Confidence 99987665 799999999999998877621 14566664 456665322221100 0001123445
Q ss_pred EeccC----CccccC--------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEe
Q 006746 245 AEFSW----PRLRIN--------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILID 307 (632)
Q Consensus 245 v~~~~----~~~~i~--------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvD 307 (632)
++... ... .+ .++|+++|.+.. ..++.+|++..+.+.+|.+.| ++ |.++|+++|+++++|
T Consensus 183 ~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D 259 (459)
T 4a6r_A 183 IEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG--ADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVAD 259 (459)
T ss_dssp ECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred eCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 55321 111 23 678888887421 124688888888889999998 88 999999999999999
Q ss_pred cccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccC
Q 006746 308 ACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 358 (632)
Q Consensus 308 aaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~ 358 (632)
-++. ++.. +...+.....||++++| |.+|.....+|++++++++++.+.
T Consensus 260 Ev~~g~gr~G~~~~~~~~~~~pdi~t~s--K~l~gg~~~lg~v~~~~~i~~~~~ 311 (459)
T 4a6r_A 260 EVICGFGRTGEWFGHQHFGFQPDLFTAA--KGLSSGYLPIGAVFVGKRVAEGLI 311 (459)
T ss_dssp CTTTTTTTTSSSSHHHHHTCCCSEEEEC--GGGGTTSSCCEEEEECHHHHHHHH
T ss_pred ccccCCCcccccchHhhcCCCCCeeehh--hhhcCCCCCccceeeCHHHHHHhh
Confidence 9876 3321 11122223468988776 966521135799999888765553
No 208
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.63 E-value=6.4e-15 Score=155.18 Aligned_cols=167 Identities=14% Similarity=0.118 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCC--eEEEeccccchhhHHHHHHHHhcCCEEEEEec
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVK--NLLTVYDYESEAVEAMIRTSEKRGARVMSAEF 247 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd--~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v~~ 247 (632)
....+.|+++++++|.+ ..+|++|+|+|+.+++.++ ..+|| .|++...+|...... ...+...|++++.++.
T Consensus 47 ~~~~~l~~~la~~~~~~----~~i~~~~G~~a~~~al~~~-~~~gd~~~vi~~~~~~~~~~~~-~~~~~~~g~~~~~v~~ 120 (357)
T 3lws_A 47 AIIEPFEQKFADVLGMD----DAVFFPSGTMAQQVALRIW-SDETDNRTVAYHPLCHLEIHEQ-DGLKELHPIETILVGA 120 (357)
T ss_dssp TTHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHH-HHHHTCCEEEECTTCHHHHSST-THHHHHSSCEEEECSC
T ss_pred hHHHHHHHHHHHHhCCC----cEEEecCcHHHHHHHHHHH-hhcCCCcEEEecccceeeeecc-chhhhccCcEEEEecC
Confidence 34568999999999985 2466688999999888877 45677 566544333211211 1123446888887774
Q ss_pred cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCC-ccccc---hH-HHHHHhhCCcEEEEecccc------CCCCC
Q 006746 248 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYP---YL-WMRIAQENDWHILIDACAL------GPKDM 316 (632)
Q Consensus 248 ~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~T-G~~~p---l~-i~~~a~~~g~~vlvDaaq~------~g~~m 316 (632)
+++.+|+++|+++. + ++++++...+|+| |..+| ++ |+++|+++|+++++|.++. .+...
T Consensus 121 --~~~~~d~~~l~~~~--~------~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~ 190 (357)
T 3lws_A 121 --ADRLMTLDEIKALP--D------IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTA 190 (357)
T ss_dssp --TTSCCCHHHHHTCC--S------CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCH
T ss_pred --CCCCcCHHHHhcCc--C------cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCCh
Confidence 45678999988751 1 5899999999998 99886 77 8899999999999998865 12211
Q ss_pred CCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcccc
Q 006746 317 DSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 357 (632)
Q Consensus 317 ~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L 357 (632)
..+. ..+|.++.|++|.||. |.| |+++.+++.++.+
T Consensus 191 ~~~~---~~~d~~~~s~sK~~~~-~~g-g~~~~~~~~~~~~ 226 (357)
T 3lws_A 191 AEIA---GLFDSIYISFYKGLGG-IAG-AILAGPAAFCQTA 226 (357)
T ss_dssp HHHH---TTSSEEEEESSSTTCC-SSC-EEEEECHHHHHHH
T ss_pred HHHH---hcCCEEEEeccccCCC-Cce-EEEEcCHHHHHHH
Confidence 1111 3469999999998854 888 8888877665444
No 209
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.60 E-value=3.3e-14 Score=156.42 Aligned_cols=346 Identities=12% Similarity=0.033 Sum_probs=212.4
Q ss_pred CCc--eEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHH
Q 006746 107 SNH--TCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKR 178 (632)
Q Consensus 107 ~~~--vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ 178 (632)
+++ -|||..+. |.-++.+++++.+.+...... . ++.-..+...+.+++
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~------------------~------~~~~~~~~~~~L~e~ 126 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHV------------------M------FGGLTHEPAARLAKL 126 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCC------------------C------SSSEECHHHHHHHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCc------------------c------ccccCCHHHHHHHHH
Confidence 456 89998763 455888888876543221000 0 001123556789999
Q ss_pred HHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCC------CCCC-eEEE-eccccchhhHHHHH---------HHHhcCCE
Q 006746 179 IMDFLNISENDYGMVFTANRTSAFKLLAESYPF------MSVK-NLLT-VYDYESEAVEAMIR---------TSEKRGAR 241 (632)
Q Consensus 179 ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~------~~gd-~ilt-~~d~~s~~v~~~~~---------~a~~~G~~ 241 (632)
++++++.+.+ .|+||+|+|+|+.+++..+.. ++|+ +|++ ...||......+.. ........
T Consensus 127 la~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (457)
T 3tfu_A 127 LVDITPAGLD--TVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAA 204 (457)
T ss_dssp HHHHSSTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCC
T ss_pred HHHhCCCCcC--EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCC
Confidence 9999987654 799999999999998776521 1455 5654 45666532222110 00111223
Q ss_pred EEEEeccCC-ccccCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccc----hH-HHHHHhhCCcEEEEecccc-CC
Q 006746 242 VMSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYP----YL-WMRIAQENDWHILIDACAL-GP 313 (632)
Q Consensus 242 v~~v~~~~~-~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~-~g 313 (632)
+..++.... ....+.++|+++|++.. .++++|++.. +++.+|...| ++ +.++|+++|+++++|.++. +|
T Consensus 205 ~~~~~~p~~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g 281 (457)
T 3tfu_A 205 QVFAPQVPRDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFG 281 (457)
T ss_dssp CEEECCCCSSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred ceEecCCCcccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCc
Confidence 444444211 11246788999887421 2468888888 9999999987 88 9999999999999999876 23
Q ss_pred CC--CCCCCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccc
Q 006746 314 KD--MDSFGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ 390 (632)
Q Consensus 314 ~~--m~~ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 390 (632)
.. +..++.....||++++ -|.+|. . ..+|+++.++++++.+..... +.. .
T Consensus 282 r~G~~~a~~~~~~~pdiit~--sK~l~g-G~~~lG~v~~~~~i~~~~~~~~~-~~~---------~-------------- 334 (457)
T 3tfu_A 282 RTGALFAADHAGVSPDIMCV--GKALTG-GYLSLAATLCTADVAHTISAGAA-GAL---------M-------------- 334 (457)
T ss_dssp TTSSSSTHHHHTCCCSEEEE--CGGGGT-TSSCCEEEEEEHHHHHHHHHSSS-CSC---------C--------------
T ss_pred cccchhHhHhcCCCceEEEE--ChhhhC-CCcceEEEEEcHHHHHHhhccCC-Cce---------e--------------
Confidence 21 1112222346898855 496662 2 258999999988765531100 000 0
Q ss_pred cchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHH
Q 006746 391 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 470 (632)
Q Consensus 391 ~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~ 470 (632)
..+| |. .|.....+. .++|+.+.+ +.+.+++
T Consensus 335 --------~~~t--~~------------~n~~a~aaa------------------------~aaL~~~~~---~~~~~~~ 365 (457)
T 3tfu_A 335 --------HGPT--FM------------ANPLACAVS------------------------VASVELLLG---QDWRTRI 365 (457)
T ss_dssp --------CCCT--TT------------TCHHHHHHH------------------------HHHHHHHHT---SCHHHHH
T ss_pred --------EecC--CC------------cCHHHHHHH------------------------HHHHHHHhh---hHHHHHH
Confidence 0000 00 011111111 156666654 3567888
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHh
Q 006746 471 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSD 550 (632)
Q Consensus 471 ~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~ 550 (632)
+.+.+++++.|.++.. .|.+..+ ...|.++.|.+.+. .+...+.+.+.++||.++..
T Consensus 366 ~~~~~~l~~~L~~l~~-----~~~v~~v-----r~~G~~~~i~l~~~----~~~~~~~~~l~~~Gv~v~~~--------- 422 (457)
T 3tfu_A 366 TELAAGLTAGLDTARA-----LPAVTDV-----RVCGAIGVIECDRP----VDLAVATPAALDRGVWLRPF--------- 422 (457)
T ss_dssp HHHHHHHHHHHGGGGG-----STTEEEE-----EECSSCEEEEESSC----CCHHHHHHHHHHTTEECCCB---------
T ss_pred HHHHHHHHHHHHHHhc-----CCCeeee-----ecCCeEEEEEECCc----ccHHHHHHHHHHCCeEEEec---------
Confidence 8899999999988731 2444322 12477888877652 34555665555669887621
Q ss_pred HHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 551 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 551 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
...||+++.+..|.|||+++++.|+++++.
T Consensus 423 --------------------------------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 423 --------------------------------RNLVYAMPPYICTPAEITQITSAMVEVARL 452 (457)
T ss_dssp --------------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 148999999999999999999999998864
No 210
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.60 E-value=5.9e-15 Score=160.94 Aligned_cols=155 Identities=14% Similarity=0.124 Sum_probs=111.1
Q ss_pred HHHHHHHHHHcC------CCCCCccEEEeCCHHHHHHHHHhhCC-------CCCCCeEEEec-cccchhhHHHHHHHHhc
Q 006746 173 SAMKKRIMDFLN------ISENDYGMVFTANRTSAFKLLAESYP-------FMSVKNLLTVY-DYESEAVEAMIRTSEKR 238 (632)
Q Consensus 173 ~~~R~~ia~~l~------a~~~ey~vvft~naT~al~lv~~sl~-------~~~gd~ilt~~-d~~s~~v~~~~~~a~~~ 238 (632)
.+.|+.|+++++ ++++ .|++|+|+|+|+.+++.++. +++||+|++.. .|+. ....++..
T Consensus 103 ~~lr~aia~~~~~~~~~~~~~~--~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~-----~~~~~~~~ 175 (427)
T 2hox_A 103 FELEKTIKELHEVVGNAAAKDR--YIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPV-----FREQTKYF 175 (427)
T ss_dssp HHHHHHHHHHHHHHTCBCCTTC--EEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHH-----HHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCcCCCCC--EEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCccc-----HHHHHHHc
Confidence 578888888886 5554 79999999999999999983 78999987654 4432 23445667
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchHHHHHHhhCCcEEEEeccccCCCCCCC
Q 006746 239 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDS 318 (632)
Q Consensus 239 G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~i~~~a~~~g~~vlvDaaq~~g~~m~~ 318 (632)
|++++... ++.++|++++++ ++++++++..+|+||..+| +++ + ++..+.|.+.+.+.. ..
T Consensus 176 g~~~~~~~-------~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~-~~l---~--~~~~i~d~~~~~~~~-s~ 235 (427)
T 2hox_A 176 DKKGYVWA-------GNAANYVNVSNP------EQYIEMVTSPNNPEGLLRH-AVI---K--GCKSIYDMVYYWPHY-TP 235 (427)
T ss_dssp CBTTEEEE-------EEGGGGTTCSCG------GGEEEEEESSCTTTCCCCC-CSS---T--TCEEEEECTTCSTTT-SC
T ss_pred CCeeeeec-------CCHHHHHHhhcC------CceEEEEcCCCCCcccccH-HHH---c--CCCEEEeecccCCCC-Cc
Confidence 88876443 344566655543 3589999999999999999 733 3 567888887654321 12
Q ss_pred CCCCCCCCcEEEEccccccCCCCCc--eEEEEEe-CCCcccc
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSG--FGCLFVK-KSTVPIL 357 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G--~G~L~Vr-~~~~~~L 357 (632)
+.+. .+.|+++.|++|.+| +.| +|+++++ +++++.+
T Consensus 236 ~~~~-~~~~i~~~S~SK~~g--~~G~RiG~~~~~~~~l~~~l 274 (427)
T 2hox_A 236 IKYK-ADEDILLFTMSKFTG--HSGSRFGWALIKDESVYNNL 274 (427)
T ss_dssp CCSC-BCCSEEEEEHHHHTS--CGGGCCEEEEECCHHHHHHH
T ss_pred cccC-CCceEEEEeChhcCC--CCCceEEEEEECCHHHHHHH
Confidence 2332 567999999999999 457 7999995 5555444
No 211
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.38 E-value=7.9e-17 Score=172.53 Aligned_cols=173 Identities=12% Similarity=0.149 Sum_probs=121.9
Q ss_pred HHHHHHHHHHc----C--CCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEE
Q 006746 173 SAMKKRIMDFL----N--ISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 173 ~~~R~~ia~~l----~--a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
.+.|+.+++++ | ++++ .|++|+|+++|+.+++.++ .++||+|++. ..|++ . ...++..|++++.+
T Consensus 69 ~~l~~~la~~l~~~~g~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~~ 140 (392)
T 3b1d_A 69 DELLQAVLDWEKSEHQYSFDKE--DIVFVEGVVPAISIAIQAF-TKEGEAVLINSPVYPP-F----ARSVRLNNRKLVSN 140 (392)
Confidence 35566666654 5 4444 7999999999999999998 6789987654 45553 1 23446678999888
Q ss_pred eccCCc--cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc---hH-HHHHHhhCCcEEEEeccccC----CCC
Q 006746 246 EFSWPR--LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKD 315 (632)
Q Consensus 246 ~~~~~~--~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p---l~-i~~~a~~~g~~vlvDaaq~~----g~~ 315 (632)
+.++.+ ..+++++|++++.+. +++++++++.+|+||..+| ++ |+++|+++|+++++|.++.. +..
T Consensus 141 ~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 215 (392)
T 3b1d_A 141 SLKEENGLFQIDFEQLENDIVEN-----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHE 215 (392)
Confidence 875332 347889999888631 2478889999999999998 77 88999999999999998765 210
Q ss_pred CCC-CCCCC--CCCcEEEEccccccCCCCCceEEEEEeCC-CccccC
Q 006746 316 MDS-FGLSL--VRPDFLICSFYQIFGENPSGFGCLFVKKS-TVPILV 358 (632)
Q Consensus 316 m~~-ldls~--~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~-~~~~L~ 358 (632)
..+ ..+.. .+.++++.|++|.+|.+...+|+++++++ .++.+.
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 262 (392)
T 3b1d_A 216 HVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFK 262 (392)
Confidence 011 12211 45568999999998842224688888654 555443
No 212
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.59 E-value=2.8e-14 Score=156.04 Aligned_cols=176 Identities=13% Similarity=0.074 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCCCCCCCeEEEec--cccchhhHHHH------HHHHhcCCEE
Q 006746 171 LESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYPFMSVKNLLTVY--DYESEAVEAMI------RTSEKRGARV 242 (632)
Q Consensus 171 ~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~~~~gd~ilt~~--d~~s~~v~~~~------~~a~~~G~~v 242 (632)
..+++++.+++++|++.....++|+ |+|+|+.+++.++ +++||+|++.. .|.+ ....+. ..++..|+++
T Consensus 66 ~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al-~~~Gd~Vl~~~~~~y~~-~~~~~~l~g~~~~~~~~~G~~~ 142 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGI-LRPGDELLYITGKPYDT-LEEIVGVRGKGVGSFKEYNIGY 142 (431)
T ss_dssp HHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTT-CCTTCEEEECSSSCCTT-HHHHTTSSSCSSSCSGGGTCEE
T ss_pred hHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHh-CCCCCEEEEeCCCCchh-HHHHHhhcccccchHHHcCCEE
Confidence 3678999999999997542223366 7799999999988 78999988765 4443 232221 3345689999
Q ss_pred EEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEec----cCCCCccccchH-HHHHHhh--CCcEEEEeccccCCCC
Q 006746 243 MSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPL----HSRMTGARYPYL-WMRIAQE--NDWHILIDACALGPKD 315 (632)
Q Consensus 243 ~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~----~sn~TG~~~pl~-i~~~a~~--~g~~vlvDaaq~~g~~ 315 (632)
+.++.+ +++.+|+++|+++|+++ +++|.+.. ..+.+|...|++ |+++|++ +|+++++|.++..+.
T Consensus 143 ~~v~~~-~~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~- 214 (431)
T 3ht4_A 143 NAVPLT-EGGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFI- 214 (431)
T ss_dssp EECCBC-TTSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTS-
T ss_pred EEeCCC-CCCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhc-
Confidence 999987 46789999999998754 58999987 677778888899 9999999 999999999988764
Q ss_pred CCCCCCCCCCCcEEEEccccccCC--CCCceEEEEEeCCCccccCC
Q 006746 316 MDSFGLSLVRPDFLICSFYQIFGE--NPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 316 m~~ldls~~~~Df~~~S~hK~~G~--~P~G~G~L~Vr~~~~~~L~~ 359 (632)
...+...+++|+++.|++|.+|. .|.| |+++.++++++.+..
T Consensus 215 -~~~~~~~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~ 258 (431)
T 3ht4_A 215 -EEQEPCHVGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAY 258 (431)
T ss_dssp -SSCCGGGTTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHH
T ss_pred -cCCCccccCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHH
Confidence 12223345789999999997542 2667 999998877665543
No 213
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.59 E-value=2e-13 Score=150.78 Aligned_cols=348 Identities=12% Similarity=0.058 Sum_probs=208.9
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||+.+. |.-++.+++++.+.+..... ...... -..+...+..++++
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~------------------~~~~~~-----~~~~~~~~lae~l~ 109 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPY------------------YNTFFK-----TTHVPAIALAQKLA 109 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSC------------------CCSSSS-----EECHHHHHHHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccc------------------cccccc-----cCCHHHHHHHHHHH
Confidence 56789998763 45578888887654322100 000000 02345568899999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-------CCCCeEEE-eccccchhhHHHHHHH---Hh----cCCEEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF-------MSVKNLLT-VYDYESEAVEAMIRTS---EK----RGARVMSA 245 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~-------~~gd~ilt-~~d~~s~~v~~~~~~a---~~----~G~~v~~v 245 (632)
++++.+.+ .|+||+++++|+..++..+.- ..+++|++ ...||......+.-.. .+ ....+..+
T Consensus 110 ~~~~~~~~--~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v 187 (472)
T 3hmu_A 110 ELAPGDLN--HVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHI 187 (472)
T ss_dssp HHSCTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEE
T ss_pred HhCCCCCC--EEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEe
Confidence 99877554 799999999999998876521 13456654 4566653322211000 00 11134555
Q ss_pred eccC----CccccC--------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEec
Q 006746 246 EFSW----PRLRIN--------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDA 308 (632)
Q Consensus 246 ~~~~----~~~~i~--------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDa 308 (632)
+... ... .+ .++|+++|++.. ..++.+|++..+.+.+|.+.| ++ +.++|+++|+++++|-
T Consensus 188 ~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DE 264 (472)
T 3hmu_A 188 NQPNWWAEGGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADE 264 (472)
T ss_dssp CCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 5421 011 22 678888886421 124688999889999999998 88 9999999999999999
Q ss_pred ccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCC
Q 006746 309 CAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSC 384 (632)
Q Consensus 309 aq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~ 384 (632)
++. +|.. +...+.....||++++| |.+|. . -.+|+++.++++++.+.+..+. .
T Consensus 265 v~~gfgr~G~~~a~~~~~v~pdi~t~s--K~l~g-g~~plG~v~~~~~i~~~~~~~~~~---------------~----- 321 (472)
T 3hmu_A 265 VICGFGRTGNWFGTQTMGIRPHIMTIA--KGLSS-GYAPIGGSIVCDEVAHVIGKDEFN---------------H----- 321 (472)
T ss_dssp TTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTT-TSSCCEEEEEEHHHHHHHTTSCBC---------------C-----
T ss_pred cccCCcccCccchhHHhCCCCceeeec--hhhhc-CCcceEEEEECHHHHHhcccCCcc---------------c-----
Confidence 877 3321 11111123468998876 96663 2 2479999999887666321100 0
Q ss_pred CCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHH
Q 006746 385 ETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLT 464 (632)
Q Consensus 385 ~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~ 464 (632)
.+| |. .|.....+. .++|+.+.+ +
T Consensus 322 ---------------~~t--~~------------~np~a~aAa------------------------~aaL~~~~~---~ 345 (472)
T 3hmu_A 322 ---------------GYT--YS------------GHPVAAAVA------------------------LENLRILEE---E 345 (472)
T ss_dssp ---------------CCT--TT------------TCHHHHHHH------------------------HHHHHHHHH---T
T ss_pred ---------------cCC--CC------------CCHHHHHHH------------------------HHHHHHHHH---h
Confidence 000 00 000111111 156766654 3
Q ss_pred HHHHHHH-HHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC--CccC------HHHHHHHHHhCC
Q 006746 465 MISRRGR-CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR--EKIE------PVLVQKLADREN 535 (632)
Q Consensus 465 ~I~~r~~-~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G--~~i~------~~~V~kla~~~g 535 (632)
.+.++++ .+.+++++.|.+|.. .|.+..+ ...|.++.|.+.+... +.++ ...+.+.+.++|
T Consensus 346 ~~~~~~~~~~~~~l~~~L~~l~~-----~~~v~~v-----r~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 415 (472)
T 3hmu_A 346 NILDHVRNVAAPYLKEKWEALTD-----HPLVGEA-----KIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANN 415 (472)
T ss_dssp THHHHHHHTHHHHHHHHHHGGGG-----STTEEEE-----EEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEE-----EecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCC
Confidence 4567777 788888888877631 2444332 1257777887754211 1111 234444444568
Q ss_pred cEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 536 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 536 I~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
|.++.+ + ++||+++.+..|.|||+++++.|+++++.
T Consensus 416 v~v~~~----------------------------------------g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 416 LIMRHV----------------------------------------G-DRMIISPPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp BCCEEE----------------------------------------T-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cEEEec----------------------------------------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 776532 2 69999999999999999999999998875
No 214
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.58 E-value=7.6e-13 Score=144.60 Aligned_cols=220 Identities=10% Similarity=0.082 Sum_probs=130.4
Q ss_pred CCceEeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag------~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||.++ .|.-++.+++++.+.+..... .+.. +. ..+...+.+++++
T Consensus 42 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~------------------~~~~-----~~-~~~~~~~la~~l~ 97 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAH------------------STLL-----GM-TNVPATQLAETLI 97 (448)
T ss_dssp TSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSC------------------CCCS-----SS-EEHHHHHHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccC------------------cccc-----cc-CCHHHHHHHHHHH
Confidence 5677999876 345578888887654432100 0000 00 1245568889999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCCC---CC----CeEEE-eccccchhhHHHHHHHH---hc-----CCEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPFM---SV----KNLLT-VYDYESEAVEAMIRTSE---KR-----GARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~~---~g----d~ilt-~~d~~s~~v~~~~~~a~---~~-----G~~v~~ 244 (632)
++++...+ .|+||+|+|+|+..++..+.-. +| ++|++ ...||......+.-... +. ...+..
T Consensus 98 ~~~~~~~~--~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (448)
T 3dod_A 98 DISPKKLT--RVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYK 175 (448)
T ss_dssp HHSCTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEE
T ss_pred HhCCCCCC--EEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceE
Confidence 99976544 7999999999999988775211 34 77664 44566422211110000 00 122334
Q ss_pred EeccCCccc-----------cCHHHHHHHHHhcCcCCCceeEEEEeccC-CCCccccc----hH-HHHHHhhCCcEEEEe
Q 006746 245 AEFSWPRLR-----------INSEKLRKMVVSKGKKKKQRGLFVFPLHS-RMTGARYP----YL-WMRIAQENDWHILID 307 (632)
Q Consensus 245 v~~~~~~~~-----------i~~~~l~~~i~~~~~~~~~~~Lv~~~~~s-n~TG~~~p----l~-i~~~a~~~g~~vlvD 307 (632)
++.. ...+ .+.++|+++|... ..++++|++..+. +.+|.+.| ++ +.++|+++|+++++|
T Consensus 176 ~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~D 251 (448)
T 3dod_A 176 APIP-YVYRSESGDPDECRDQCLRELAQLLEEH---HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVD 251 (448)
T ss_dssp ECCC-CCTTSSSCCHHHHHHHHHHHHHHHHHHH---GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred eCCC-ccccCCccchhhhhHHHHHHHHHHHHhC---CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEe
Confidence 4432 1111 2478899888731 1245777777777 89998887 88 999999999999999
Q ss_pred cccc-CCCC--CCCCCCCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCC
Q 006746 308 ACAL-GPKD--MDSFGLSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 308 aaq~-~g~~--m~~ldls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~ 359 (632)
-++. ++.. +...+.....+|++++| |.+|. . ..+|+++.++++++.+.+
T Consensus 252 Ev~~g~g~~g~~~a~~~~~~~~di~t~s--K~l~~-G~~~ig~v~~~~~~~~~~~~ 304 (448)
T 3dod_A 252 EVATGFGRTGKMFACEHENVQPDLMAAG--KGITG-GYLPIAVTFATEDIYKAFYD 304 (448)
T ss_dssp CTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGT-TSSCCEEEEEEHHHHHTTCS
T ss_pred ccccCCCcccchhhhhhcCCCCCEEEec--ccccC-CcCceEEEEECHHHHHHhhh
Confidence 9876 3321 11222233468988766 97763 3 257999999888776654
No 215
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.57 E-value=3e-13 Score=149.52 Aligned_cols=352 Identities=12% Similarity=0.074 Sum_probs=209.1
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..+. |.-++.+++++.+.+..... +... + -..+...+..++++
T Consensus 52 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~------------------~~~~-----~-~~~~~~~~la~~l~ 107 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPY------------------ASPW-----Y-MATSPAARLAEKIA 107 (476)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCC------------------CCTT-----T-CBCHHHHHHHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccC------------------cccC-----c-cCCHHHHHHHHHHH
Confidence 56779998654 55688888887654332100 0000 0 02355678889999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-------CCCCeEEE-eccccchhhHHHHHHHHh-----c---CCEEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF-------MSVKNLLT-VYDYESEAVEAMIRTSEK-----R---GARVMS 244 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~-------~~gd~ilt-~~d~~s~~v~~~~~~a~~-----~---G~~v~~ 244 (632)
++++.+.+ .|+||+|+|+|+..++..+.- ..+++|++ ...||......+.-.... . ...+..
T Consensus 108 ~~~~~~~~--~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
T 3i5t_A 108 TLTPGDLN--RIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISF 185 (476)
T ss_dssp TTSSTTCC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEE
T ss_pred hcCCCCcC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEE
Confidence 99976554 799999999999998877521 22445654 456665332221100000 0 112344
Q ss_pred EeccCC-cc-ccC--------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecc
Q 006746 245 AEFSWP-RL-RIN--------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 245 v~~~~~-~~-~i~--------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaa 309 (632)
++.... .. ..+ .++|+++|.+.. ..++.+|++..+.+.+|.+.| ++ +.++|+++|+++++|-+
T Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv 263 (476)
T 3i5t_A 186 LSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEV 263 (476)
T ss_dssp ECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred eCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 443210 00 111 678888887421 124688888889999998877 88 99999999999999998
Q ss_pred ccC-CCC--CCCCC-CCCCCCcEEEEccccccCCCC-CceEEEEEeCCCccccCCCCCC-CceeecccccccccccccCC
Q 006746 310 ALG-PKD--MDSFG-LSLVRPDFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSS 383 (632)
Q Consensus 310 q~~-g~~--m~~ld-ls~~~~Df~~~S~hK~~G~~P-~G~G~L~Vr~~~~~~L~~~~~g-G~v~~~~~~~~~~~~~~~~~ 383 (632)
+.. |.. +.... .....||++++| |.+|. . ..+|++++++++++.+.+.... +.. .
T Consensus 264 ~~g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~~-G~~plg~v~~~~~i~~~~~~~~~~~~~~---------~------- 324 (476)
T 3i5t_A 264 VTGFGRCGEWFASEKVFGVVPDIITFA--KGVTS-GYVPLGGLAISEAVLARISGENAKGSWF---------T------- 324 (476)
T ss_dssp TTTTTTTSSSCHHHHTTCCCCSEEEEC--GGGGT-TSSCCEEEEECHHHHHTTSGGGCTTCEE---------C-------
T ss_pred ccCCccccCceeeecccCCCcchhhhh--hhhcC-CCcCeEEEEECHHHHHHHhcCCcccccc---------c-------
Confidence 763 321 11112 223468998776 97663 2 3479999998877666542100 000 0
Q ss_pred CCCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCH
Q 006746 384 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 463 (632)
Q Consensus 384 ~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl 463 (632)
..+| |. .|.....+. .++|+.+.+
T Consensus 325 ---------------~~~t--~~------------~np~a~aAa------------------------~aaL~~~~~--- 348 (476)
T 3i5t_A 325 ---------------NGYT--YS------------NQPVACAAA------------------------LANIELMER--- 348 (476)
T ss_dssp ---------------CCCT--TT------------TCHHHHHHH------------------------HHHHHHHHH---
T ss_pred ---------------ccCC--CC------------cCHHHHHHH------------------------HHHHHHHHh---
Confidence 0011 10 011111111 156766654
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccC-------HHHHHHHHHhCCc
Q 006746 464 TMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIE-------PVLVQKLADRENI 536 (632)
Q Consensus 464 ~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~-------~~~V~kla~~~gI 536 (632)
+.+.++++.+.+++++.|.+|.. .|.+..+- ..|.++.+.+.+.....-+ ...+.+.+.++||
T Consensus 349 ~~~~~~~~~~~~~l~~~L~~l~~-----~~~v~~v~-----~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 418 (476)
T 3i5t_A 349 EGIVDQAREMADYFAAALASLRD-----LPGVAETR-----SVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGL 418 (476)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTTT-----STTEEEEE-----EETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEE-----ecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCC
Confidence 45677888888999999887731 24443321 2567777777653211111 2334444445687
Q ss_pred EEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 537 SLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 537 ~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.++. .+ +.||+++++..|.+||+++++.|+++|+.
T Consensus 419 ~v~~----------------------------------------~g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~ 453 (476)
T 3i5t_A 419 IVRP----------------------------------------LG-DLCVISPPLIISRAQIDEMVAIMRQAITE 453 (476)
T ss_dssp ECEE----------------------------------------ET-TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEe----------------------------------------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 7652 12 69999999999999999999999998865
No 216
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.57 E-value=1.6e-13 Score=148.96 Aligned_cols=206 Identities=15% Similarity=0.147 Sum_probs=133.1
Q ss_pred CCceEeecCCCC------CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIG------LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~g------l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||+++.. .-++.+++++.+.+.... .++. ......+.+++++
T Consensus 53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--------------------------~~~~-~~~~~~~l~~~la 105 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGV--------------------------LYGT-PTALEVKFAKMLK 105 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCS--------------------------CCSS-CCHHHHHHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCc--------------------------CCCC-CCHHHHHHHHHHH
Confidence 567899987653 347888888765332110 0000 1234457888999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEE-eccccchhhHHHHHHHHhcCC------------------
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLT-VYDYESEAVEAMIRTSEKRGA------------------ 240 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~------------------ 240 (632)
++++ +++ .|+||+|+|+|+.+++.... ..++++|++ ...||......+. ..|.
T Consensus 106 ~~~~-~~~--~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~ 178 (434)
T 3l44_A 106 EAMP-ALD--KVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLV----AAGSGPSTLGTPDSAGVPQSIA 178 (434)
T ss_dssp HHCT-TCS--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGB----C-------CCCBSSTTCCHHHH
T ss_pred HhCC-CCC--EEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHh----hcCCcccccCCCCcCCCCCcCC
Confidence 9997 443 79999999999999887652 125667664 4455542221110 0111
Q ss_pred -EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC--
Q 006746 241 -RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-- 312 (632)
Q Consensus 241 -~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-- 312 (632)
.+..+|. -|.++|+++|.+.. .++.+|++..+.+.+|...| ++ |.++|+++|+++++|.++..
T Consensus 179 ~~~~~~~~------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~ 249 (434)
T 3l44_A 179 QEVITVPF------NNVETLKEALDKWG---HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFR 249 (434)
T ss_dssp TTEEEECT------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTT
T ss_pred CceEecCc------ccHHHHHHHHHhCC---CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccccee
Confidence 2222222 17889999987421 24688888888899999998 99 99999999999999999862
Q ss_pred -CCCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 313 -PKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 313 -g~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
|. +..++.-...+|++++| |.+|. +..+|+++.++++++.+.+
T Consensus 250 ~g~-~~~~~~~~~~~di~t~s--K~~~~-G~~iG~~~~~~~i~~~~~~ 293 (434)
T 3l44_A 250 FMY-GGAQDLLGVTPDLTALG--KVIGG-GLPIGAYGGKKEIMEQVAP 293 (434)
T ss_dssp SSS-SCHHHHHTCCCSEEEEE--GGGGT-TSSCEEEEECHHHHTTBTT
T ss_pred ccc-cHHHHHcCCCCCeeehh--hhhcC-CcCeeeEEEcHHHHHhhcc
Confidence 21 01111223457877655 97763 5679999998888766643
No 217
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.56 E-value=2.6e-13 Score=148.91 Aligned_cols=347 Identities=10% Similarity=0.023 Sum_probs=201.2
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||+.+. |.-++.+++++.+.+..... | . +..-..+...+.+++++
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~-----~------------~-------~~~~~~~~~~~la~~l~ 117 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTH-----T------------C-------FMVTPYEQYVQVAELLN 117 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSC-----C------------T-------TTTSCCHHHHHHHHHHH
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccc-----c------------c-------cCcCCCHHHHHHHHHHH
Confidence 56789998864 44588888886654321100 0 0 00001245568899999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-CCCCeEE-EeccccchhhHHHHHHHH-----hc-----CCEEEEEecc
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF-MSVKNLL-TVYDYESEAVEAMIRTSE-----KR-----GARVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~-~~gd~il-t~~d~~s~~v~~~~~~a~-----~~-----G~~v~~v~~~ 248 (632)
++++.+. ...|+||+|+|+|+..++..... ..+++|+ ....||......+ .... +. ...+..+++.
T Consensus 118 ~~~~~~~-~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (453)
T 4ffc_A 118 ALTPGDH-DKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTM-ALTAKSMPYKSQFGPFAPEVYRMPAS 195 (453)
T ss_dssp HHSSCSS-CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHH-HHCCCCTTTTTTSCSCCSSEEEECCC
T ss_pred HhCCCCC-CcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHH-hhcCCCcccccCCCCCCCCcEEeCCC
Confidence 9998642 12799999999999998865422 2345665 4556775322221 1100 01 1146666654
Q ss_pred C----CccccC-------HHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC
Q 006746 249 W----PRLRIN-------SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG 312 (632)
Q Consensus 249 ~----~~~~i~-------~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~ 312 (632)
. +.+... .+.|++.+.. ..+.+|++..+.+..|...| ++ +.++|+++|+++++|-++..
T Consensus 196 ~~~~~~~g~~~~~~~~~~~~~l~~~i~~-----~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g 270 (453)
T 4ffc_A 196 YPLRDEPGLTGEEAARRAISRIETQIGA-----QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTG 270 (453)
T ss_dssp CTTTSCTTCCHHHHHHHHHHHHHHHTCG-----GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred ccccCccccchHHHHHHHHHHHHHhcCC-----CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccC
Confidence 1 111111 2334333322 24678888888888899988 88 99999999999999998762
Q ss_pred -CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCcc
Q 006746 313 -PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 389 (632)
Q Consensus 313 -g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 389 (632)
+.. +...+.....+|++++| |.+|. ...+|+++.++++++.+.+...+++ |
T Consensus 271 ~g~~g~~~a~~~~~~~pdi~t~s--K~~~~-G~~~G~~~~~~~i~~~~~~~~~~~t----------~------------- 324 (453)
T 4ffc_A 271 FARTGAWFASEHEGIVPDIVTMA--KGIAG-GMPLSAVTGRAELMDAVYAGGLGGT----------Y------------- 324 (453)
T ss_dssp TTTTSSSSTHHHHTCCCSEEEEC--GGGGT-TSSCEEEEEEHHHHTTSCTTSSCCS----------S-------------
T ss_pred CCcccccchhhhcCCCcchHhhh--hhhcC-CcCeEEEEECHHHHhhhcccCcCCC----------C-------------
Confidence 321 11112223467888766 97763 3458999999887766654221111 0
Q ss_pred ccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHH
Q 006746 390 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 469 (632)
Q Consensus 390 ~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r 469 (632)
. .|.....+. .++|+.+.+. .+.++
T Consensus 325 ----------------~------------~~~~~~aaa------------------------~aal~~~~~~---~~~~~ 349 (453)
T 4ffc_A 325 ----------------G------------GNPVTCAAA------------------------VAALGVMREL---DLPAR 349 (453)
T ss_dssp ----------------S------------SCHHHHHHH------------------------HHHHHHHHHT---THHHH
T ss_pred ----------------C------------cCHHHHHHH------------------------HHHHHHhhhh---hHHHH
Confidence 0 000001111 1566665442 34555
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC-C--ccCHHHHHHHHHhCCcEEccCccCCh
Q 006746 470 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR-E--KIEPVLVQKLADRENISLSYGSLHHI 546 (632)
Q Consensus 470 ~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G-~--~i~~~~V~kla~~~gI~lr~G~~c~~ 546 (632)
++.+.+++++.|.++.. ..|.+... ...|.++.+.+.+... + ......+.+.+.++||.++.+.
T Consensus 350 ~~~~~~~l~~~l~~~~~----~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---- 416 (453)
T 4ffc_A 350 ARAIEASVTSRLSALAE----EVDIIGEV-----RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCG---- 416 (453)
T ss_dssp HHHHHHHHHHHHHHHHH----HCSSEEEE-----EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEEC----
T ss_pred HHHHHHHHHHHHHHHHh----hCCCeEEE-----EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCC----
Confidence 66666666666655410 01334322 1246778887754110 0 0123344555556788886431
Q ss_pred HHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 547 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.....+|+++++..|.|||+++++.|++++..
T Consensus 417 ----------------------------------~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 417 ----------------------------------TFGNVIRLLPPLVIGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp ----------------------------------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 01258999999999999999999999998864
No 218
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.54 E-value=9.3e-14 Score=150.47 Aligned_cols=210 Identities=14% Similarity=0.155 Sum_probs=134.3
Q ss_pred CCceEeecCCCC------CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIG------LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~g------l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||..+.- .-++.+++++.+.+... . . |+. ..+...+.+++++
T Consensus 50 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~----~-------~---------------~~~-~~~~~~~la~~l~ 102 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKG----T-------S---------------FGA-PCALENVLAEMVN 102 (427)
T ss_dssp TSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTC----S-------C---------------CSS-CCHHHHHHHHHHH
T ss_pred CCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhC----C-------C---------------cCC-CCHHHHHHHHHHH
Confidence 467799987653 34888888876544221 0 0 000 1245568889999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHH---HHHh------cC------CEEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIR---TSEK------RG------ARVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~---~a~~------~G------~~v~ 243 (632)
++++ +++ .|+||+|+|+|+.+++.... +..+++|+ ....||......+.. -... .| ..+.
T Consensus 103 ~~~~-~~~--~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (427)
T 3fq8_A 103 DAVP-SIE--MVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTL 179 (427)
T ss_dssp HHST-TCS--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEE
T ss_pred HhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCcee
Confidence 9997 444 79999999999999884321 12345665 445666422111000 0000 01 1233
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC---CCC
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG---PKD 315 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~---g~~ 315 (632)
.++.+ |+++|+++|++.. .++++|++..+.+.+|...| ++ |.++|+++|+++++|.++.. |.
T Consensus 180 ~~~~~------d~~~le~~l~~~~---~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~- 249 (427)
T 3fq8_A 180 TTPYN------DLEAVKALFAENP---GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAY- 249 (427)
T ss_dssp EEETT------CHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBT-
T ss_pred ecCCC------CHHHHHHHHHhCC---CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCc-
Confidence 33331 7899999997632 24688999889999999999 99 99999999999999999871 21
Q ss_pred CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 316 MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 316 m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
+...+.....+|++++| |.+|. ...+|+++.++++++.+.+
T Consensus 250 ~~~~~~~~~~~di~t~s--K~~~~-G~~~G~~~~~~~~~~~~~~ 290 (427)
T 3fq8_A 250 GGVQEKFGVTPDLTTLG--KIIGG-GLPVGAYGGKREIMQLVAP 290 (427)
T ss_dssp THHHHHTTCCCSEEEEC--GGGGT-TSSCEEEEECHHHHTTBTT
T ss_pred chhhHhcCCCCChhhhh--hhhhC-CcceEEEEEcHHHHHhhcc
Confidence 01122223467887666 98872 2238999998888766654
No 219
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.54 E-value=1.3e-12 Score=143.24 Aligned_cols=350 Identities=10% Similarity=0.028 Sum_probs=203.8
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||+.+. |.-++.+++++.+.+..... | .. ..-..+...+.+++++
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~-----~------------~~-------~~~~~~~~~~la~~l~ 114 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTH-----T------------CF-------MVTPYEGYVAVCEQLN 114 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSC-----C------------TT-------TTSCCHHHHHHHHHHH
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhccc-----c------------cC-------CccCCHHHHHHHHHHH
Confidence 56789998864 44578888887654432100 0 00 0001245568889999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCCC-CCCCeEEE-eccccchhhHHHHHHH-----Hhc-----CCEEEEEecc
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYPF-MSVKNLLT-VYDYESEAVEAMIRTS-----EKR-----GARVMSAEFS 248 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~~-~~gd~ilt-~~d~~s~~v~~~~~~a-----~~~-----G~~v~~v~~~ 248 (632)
++++.+. ...|+||+|+|+|+..++..... ..+++|++ ...||......+ ... .+. ...+..+++.
T Consensus 115 ~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (451)
T 3oks_A 115 RLTPVRG-DKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTM-ALTAKVMPYKDGFGPFAPEIYRAPLS 192 (451)
T ss_dssp HHSSCCS-SEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHH-HHCCCCTTTTTTCCSCCSSEEEECCC
T ss_pred HhCCcCC-CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHH-HhcCCCcccccCCCCCCCCcEEeCCC
Confidence 9987542 13799999999999998866421 23356654 456775322221 110 001 1256666653
Q ss_pred CC--c----------cccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc
Q 006746 249 WP--R----------LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL 311 (632)
Q Consensus 249 ~~--~----------~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~ 311 (632)
.+ . +..+.+.+++.|.+.. ....+.+|++..+.+..|...| ++ +.++|+++|+++++|-++.
T Consensus 193 ~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 271 (451)
T 3oks_A 193 YPFRDAEFGKELATDGELAAKRAITVIDKQI-GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT 271 (451)
T ss_dssp CHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccccccccccccchhhHHHHHHHHHHHHhhc-CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 10 0 0012444555555311 1135688888888888999988 89 9999999999999999876
Q ss_pred C-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCc
Q 006746 312 G-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP 388 (632)
Q Consensus 312 ~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~ 388 (632)
. +.. +..++.....+|++++| |.+|. ...+|+++.++++++.+.+...+++ |
T Consensus 272 g~g~~g~~~~~~~~~~~pdi~t~s--K~l~~-G~~iG~v~~~~~~~~~~~~~~~~~t----------~------------ 326 (451)
T 3oks_A 272 GFARTGAMFACEHEGIDPDLIVTA--KGIAG-GLPLSAVTGRAEIMDSPHVSGLGGT----------Y------------ 326 (451)
T ss_dssp TTTTTSSSSGGGGGTCCCSEEEEC--GGGGT-TSSCEEEEEEHHHHTCSCTTSBCCS----------S------------
T ss_pred CCCccccchhhhhcCCCCCeeeeh--hhhhC-CcceEEEEECHHHHhhhcCCCcCCC----------C------------
Confidence 2 221 11222223467888555 97763 3457999999887766654221110 0
Q ss_pred cccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHH
Q 006746 389 EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 468 (632)
Q Consensus 389 ~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~ 468 (632)
. .|.....+. .++|+.+.+. .+.+
T Consensus 327 -----------------~------------~~~~~~aaa------------------------~aal~~~~~~---~~~~ 350 (451)
T 3oks_A 327 -----------------G------------GNPIACAAA------------------------LATIETIESE---GLVA 350 (451)
T ss_dssp -----------------S------------SCHHHHHHH------------------------HHHHHHHHHT---THHH
T ss_pred -----------------C------------CCHHHHHHH------------------------HHHHHHHhhh---hHHH
Confidence 0 000011111 1566665542 4456
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCC---CccCHHHHHHHHHhCCcEEccCccCC
Q 006746 469 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR---EKIEPVLVQKLADRENISLSYGSLHH 545 (632)
Q Consensus 469 r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G---~~i~~~~V~kla~~~gI~lr~G~~c~ 545 (632)
+.+.+.+++++.|.++.. ..|.+... ...|.++.+.+.+... .......+.+.+.++||.++.+.
T Consensus 351 ~~~~~~~~l~~~L~~~~~----~~~~~~~~-----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--- 418 (451)
T 3oks_A 351 RAQQIEKIMKDRLGRLQA----EDDRIGDV-----RGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCG--- 418 (451)
T ss_dssp HHHHHHHHHHHHHHHHHH----HCTTEEEE-----EEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEEC---
T ss_pred HHHHHHHHHHHHHHHHHh----hCCCeEEE-----EEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCC---
Confidence 666666666666665410 01333321 1246788887754100 01123445555566788876430
Q ss_pred hHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhh
Q 006746 546 IWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 546 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~ 611 (632)
.....+|+++++..|.+||+++++.|+++++
T Consensus 419 -----------------------------------~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 419 -----------------------------------TYGNVVRFLPPLSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp -----------------------------------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 0125899999999999999999999999875
No 220
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.54 E-value=3.6e-13 Score=144.89 Aligned_cols=166 Identities=13% Similarity=0.118 Sum_probs=114.2
Q ss_pred HHHHHHHHHHc-CCC-----CCCccE--EEeCCHHHHHHHHHh---hCCCCCCCeEEEec-cccchhhHHHHHHHHhcCC
Q 006746 173 SAMKKRIMDFL-NIS-----ENDYGM--VFTANRTSAFKLLAE---SYPFMSVKNLLTVY-DYESEAVEAMIRTSEKRGA 240 (632)
Q Consensus 173 ~~~R~~ia~~l-~a~-----~~ey~v--vft~naT~al~lv~~---sl~~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~ 240 (632)
.+.|+.|++++ +.. ++ .| +.|.++|+|+.++.. .+ .++||+|++.. .|++ ....++..|+
T Consensus 82 ~~lr~~ia~~~~~~~~~~~~~~--~i~~~~~~~g~ga~~~~~~~~~~~-~~~gd~Vlv~~p~y~~-----~~~~~~~~g~ 153 (409)
T 4eu1_A 82 ASFVEEAQKLCFGPTCAALRDG--RIASCQTLGGTGALRIGGDLLNRF-VANCNRIYGPDVGYPN-----HESIFAKAGM 153 (409)
T ss_dssp HHHHHHHHHHHHCSSCHHHHTT--CEEEEEESHHHHHHHHHHHHGGGT-SSSCCEEEEESSCCTH-----HHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCchhhccC--ceeeeecccchHHHHHHHHHHHHh-cCCCCEEEEeCCCcHh-----HHHHHHHcCC
Confidence 37888899876 654 34 46 459999999998643 33 47889987653 4442 2345677899
Q ss_pred EEEEEecc-CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH----HHHHHhhCCcEEEEeccccC-CC
Q 006746 241 RVMSAEFS-WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG-PK 314 (632)
Q Consensus 241 ~v~~v~~~-~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a~~~g~~vlvDaaq~~-g~ 314 (632)
+++.++.+ ..+..+|+++|++.+++.. +.+.+++++..+|+||..+|.+ |+++|+++|+++++|.+... ..
T Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~ 230 (409)
T 4eu1_A 154 ELTPYSYYDPATKGLNLAGMLECLDKAP---EGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFAT 230 (409)
T ss_dssp EEEEECCEETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTT
T ss_pred eEEEEEeecCcCCcCcHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccccccc
Confidence 99999873 2456789999999997421 2357888899999999999854 67789999999999998443 21
Q ss_pred C-----CCCC-CC-CCCCCcEEEEccccccCCCCCc--eEEE--EEeC
Q 006746 315 D-----MDSF-GL-SLVRPDFLICSFYQIFGENPSG--FGCL--FVKK 351 (632)
Q Consensus 315 ~-----m~~l-dl-s~~~~Df~~~S~hK~~G~~P~G--~G~L--~Vr~ 351 (632)
. ..++ .+ ....-.+++.|+.|.||. .| +|++ ++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~--~G~riG~~~~v~~~ 276 (409)
T 4eu1_A 231 GQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGL--YGHRCGALHISTAS 276 (409)
T ss_dssp SCHHHHTHHHHHHHTTSSCCEEEEECTTTSSC--GGGCCEEEEEECSS
T ss_pred CCcccchHHHHHHHhhCCcEEEEecCcccccC--ccCCceEEEEEeCC
Confidence 1 0000 01 112334778899999994 46 5776 4443
No 221
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.53 E-value=1.2e-12 Score=142.01 Aligned_cols=208 Identities=13% Similarity=0.101 Sum_probs=131.1
Q ss_pred CCceEeecCCCC------CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIG------LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~g------l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|||+.+.. .-++.+++++.+.+.... .| +. ..+...+.+++++
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-----------~~------~~----------~~~~~~~la~~l~ 103 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGL-----------SF------GA----------PTEMEVKMAQLVT 103 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS-----------CC------SS----------CCHHHHHHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCc-----------cc------CC----------CCHHHHHHHHHHH
Confidence 567899997653 247888888765442210 00 01 1245567889999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHHHHHhcCC-----------------E
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIRTSEKRGA-----------------R 241 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~~a~~~G~-----------------~ 241 (632)
++++ .++ .|+||+|+|+|+.+++.... +..+++|+ ....||......+ .. ...|. .
T Consensus 104 ~~~~-~~~--~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 178 (429)
T 4e77_A 104 DLVP-TMD--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLL-VK-AGSGALTLGQPNSPGVPTDFAKH 178 (429)
T ss_dssp HHST-TCS--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC--------------------CCCTTSCGGGGTT
T ss_pred hhCC-CCC--EEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhh-hh-cCCcccccCCCCcCCCCCccCCc
Confidence 9987 333 79999999999999887431 23455655 4456665222111 00 00111 1
Q ss_pred EEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEecccc---CC
Q 006746 242 VMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACAL---GP 313 (632)
Q Consensus 242 v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~---~g 313 (632)
+..++. .|.++|+++|++.. ..+++|++..+.+.+|...| ++ |.++|+++|+++++|.++. .|
T Consensus 179 ~~~~~~------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g 249 (429)
T 4e77_A 179 TLTCTY------NDLASVRQAFEQYP---QEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA 249 (429)
T ss_dssp EEEECT------TCHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTB
T ss_pred eeecCC------CCHHHHHHHHHhcC---CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccC
Confidence 112211 27899999997531 24688888888888999999 89 9999999999999999987 22
Q ss_pred CCCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 314 KDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 314 ~~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
. +...+.-...+|++++| |.+|. ...+|+++.+++.++.+.+
T Consensus 250 ~-~~~~~~~~~~pdi~t~s--K~~~~-G~~~G~~~~~~~~~~~l~~ 291 (429)
T 4e77_A 250 L-AGAQDYYHVIPDLTCLG--KIIGG-GMPVGAFGGRREVMNALAP 291 (429)
T ss_dssp T-TCHHHHTTCCCSEEEEE--GGGGT-TSCCEEEEECHHHHTTBTT
T ss_pred c-chHHHhcCCCCCeeeec--ccccC-CCCeEEEEECHHHHHHhcc
Confidence 2 11122222357876554 97773 4568999998887766654
No 222
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.52 E-value=4.6e-13 Score=145.42 Aligned_cols=210 Identities=13% Similarity=0.141 Sum_probs=134.1
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|+|.++. |..++.+++++.+.+... + + ++. ..+...+.+++++
T Consensus 54 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~---------------------~-~----~~~-~~~~~~~l~~~la 106 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGHKHPRVLEAVEEALARG---------------------W-L----YGA-PGEAEVLLAEKIL 106 (434)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC---------------------S-C----CSS-CCHHHHHHHHHHH
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhC---------------------C-C----CCC-CCHHHHHHHHHHH
Confidence 45779998654 446788888876543210 0 0 011 2355678999999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHH----HHH-----HhcCC------EEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMI----RTS-----EKRGA------RVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~----~~a-----~~~G~------~v~ 243 (632)
++++ .++ .|+||+|+|+|+.+++.... +..+++|+ ....||......+. ... ...|+ ++.
T Consensus 107 ~~~~-~~~--~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~ 183 (434)
T 2epj_A 107 GYVK-RGG--MIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTL 183 (434)
T ss_dssp HHHC-TTC--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEE
T ss_pred HhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceE
Confidence 9995 333 79999999999999887621 24456755 44566652221110 000 01233 344
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccCCCCCCC
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALGPKDMDS 318 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~g~~m~~ 318 (632)
.++. .|+++|+++|++.. .++++|++..+.+.||...| ++ |.++|+++|+++++|.+|. |.-...
T Consensus 184 ~~~~------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~ 253 (434)
T 2epj_A 184 VTPY------NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRLGL 253 (434)
T ss_dssp EEET------TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTSST
T ss_pred ecCC------CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeCCc
Confidence 4443 37889999997521 24688888888888999998 99 9999999999999999987 220011
Q ss_pred ---CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 319 ---FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 319 ---ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
++.....+|++ ++.|.+|. ...+|+++++++.++.+.+
T Consensus 254 ~~~~~~~~~~~di~--s~sK~l~~-G~~~G~v~~~~~~~~~l~~ 294 (434)
T 2epj_A 254 EGAQGYFNIEGDII--VLGKIIGG-GFPVGAVAGSREVMSLLTP 294 (434)
T ss_dssp THHHHHHTCCCSEE--EEEGGGGT-TSSCEEEEECHHHHTTBTT
T ss_pred chhhHHhCCCCCee--eecchhcC-CcceeeeeecHHHHHhhcc
Confidence 11112358876 55697773 2347999999877665543
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.50 E-value=1.2e-12 Score=143.04 Aligned_cols=210 Identities=16% Similarity=0.097 Sum_probs=126.9
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
.+..|+|+++. |..++.+++++.+.+... . + ++. ..+..++..+.++
T Consensus 55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~---------------------~-~----~~~-~~~~~~~la~~l~ 107 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHG---------------------V-Q----YAA-SHPLEVRWAERIV 107 (453)
T ss_dssp TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTT---------------------C-S----SCS-SCHHHHHHHHHHH
T ss_pred CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhC---------------------C-C----CCC-CCHHHHHHHHHHH
Confidence 45679999544 446788888876643210 0 0 111 2356677888888
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHHH------HHhcCCE------EEEEe
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIRT------SEKRGAR------VMSAE 246 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~~------a~~~G~~------v~~v~ 246 (632)
++++ +++ .|+||+|+|+|+.+++.... +..+++|+ ....||......+... ....|+. +..++
T Consensus 108 ~~~~-~~~--~v~~~~gg~eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 184 (453)
T 2cy8_A 108 AAFP-SIR--KLRFTGSGTETTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR 184 (453)
T ss_dssp HHCT-TCS--EEEEESCHHHHHHHHHHHHHHHHCCCEEEEECC----------------------------CGGGEEEEC
T ss_pred hhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC
Confidence 8876 433 79999999999999888711 23445655 4445664211111100 0012332 33332
Q ss_pred ccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccCCCCCCC---
Q 006746 247 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALGPKDMDS--- 318 (632)
Q Consensus 247 ~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~g~~m~~--- 318 (632)
. .|+++|+++|++.. .++++|.+..+.+.||...| ++ |.++|+++|+++++|.++. +.-...
T Consensus 185 ~------~d~~~le~~l~~~~---~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~ 254 (453)
T 2cy8_A 185 P------DDIEGMREVFANHG---SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGM 254 (453)
T ss_dssp T------TCHHHHHHHHHHHG---GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHH
T ss_pred C------CCHHHHHHHHHhcC---CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhh
Confidence 2 37899999997421 23578888777777999998 99 9999999999999999987 220011
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
++.-...+|++ ++.|.+|. +..+|++++++++++.+.+
T Consensus 255 ~~~~~~~~di~--s~sK~l~~-G~~~G~v~~~~~~~~~l~~ 292 (453)
T 2cy8_A 255 QALLDVQPDLT--CLAKASAG-GLPGGILGGREDVMGVLSR 292 (453)
T ss_dssp HHHHTCCCSEE--EEEGGGGT-TSSCEEEEECHHHHTTSSS
T ss_pred hHHhCCCCcEE--EEChhhhC-CcceEEEechHHHHHHhcc
Confidence 11112357876 55598773 3468999999887766644
No 224
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.50 E-value=6.2e-13 Score=144.28 Aligned_cols=207 Identities=13% Similarity=0.124 Sum_probs=133.0
Q ss_pred CCceEeecCCCC------CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGIG------LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~g------l~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++.-|||+++.. .-++.+++++.+.+.... . ++. ......+.+++++
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-----------~---------------~~~-~~~~~~~l~~~la 103 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGT-----------S---------------FGA-PTEIENKLAKLVI 103 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCS-----------C---------------CSS-CCHHHHHHHHHHH
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCc-----------C---------------cCC-CCHHHHHHHHHHH
Confidence 567899998753 358888888765432110 0 000 1234457888999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEE-eccccchhhHHHHHHHHhcCC------------------
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLT-VYDYESEAVEAMIRTSEKRGA------------------ 240 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~------------------ 240 (632)
++++ .++ .|+||+|+|+|+..++.... ...+++|++ ...||......+ ...|.
T Consensus 104 ~~~~-~~~--~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~ 176 (429)
T 3k28_A 104 ERVP-SIE--IVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLL----IKAGSGVATLGLPDSPGVPEGVA 176 (429)
T ss_dssp HHST-TCS--EEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGC----SSCCTTC-----CCCTTCCHHHH
T ss_pred HhCC-CCC--EEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHH----HhcCCcccccCCCCcCCCCCccc
Confidence 9987 333 79999999999999887652 124556654 455664222111 01111
Q ss_pred -EEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccC-C
Q 006746 241 -RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALG-P 313 (632)
Q Consensus 241 -~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g 313 (632)
.+..++.+ |.++|+++|.+.. .++.+|++..+.+.+|...| ++ +.++|+++|+++++|.++.. .
T Consensus 177 ~~~~~~~~~------d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~ 247 (429)
T 3k28_A 177 KNTITVAYN------DLESVKYAFEQFG---DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFR 247 (429)
T ss_dssp TTEEEEETT------CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred CceeecCCC------CHHHHHHHHHhCC---CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccc
Confidence 22233321 7889999887421 24678888888889999999 99 99999999999999999852 1
Q ss_pred C-CCCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 314 K-DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 314 ~-~m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
. .+...+.-...+|++++| |.+|. +..+|++++++++++.+.+
T Consensus 248 ~g~~~~~~~~~~~~di~t~s--K~~~~-G~~iG~~~~~~~~~~~~~~ 291 (429)
T 3k28_A 248 VAYNCGQGYYGVTPDLTCLG--KVIGG-GLPVGAYGGKAEIMRQVAP 291 (429)
T ss_dssp SSTTHHHHHHTCCCSEEEEC--GGGGT-TSCCEEEEECHHHHTTBTT
T ss_pred cCcchHHHHhCCCCceehhh--hhhcC-CCCeEEEEEcHHHHhhhcc
Confidence 1 001111122357887655 97774 5578999999887766643
No 225
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.44 E-value=2.8e-12 Score=139.92 Aligned_cols=175 Identities=9% Similarity=-0.053 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC-C--CCCCCeEEEeccccchhhHHHHHHHHhcCCEEEEE
Q 006746 169 SGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY-P--FMSVKNLLTVYDYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 169 ~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl-~--~~~gd~ilt~~d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
..+.+++-..+.+++|.+.. ...++++++|.+.++++-+. . ..+++.|+++-.-|..... .+.-.|+..+++
T Consensus 97 ~~~e~~~~~~~~~~lGlp~~-~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k----Al~l~Gl~p~~v 171 (450)
T 3bc8_A 97 NKITNSLVLNVIKLAGVHSV-ASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK----SMVTAGFEPVVI 171 (450)
T ss_dssp HHHHHHHHHHHHHHHTCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH----HHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCC-ceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH----HHHHcCCeeEEE
Confidence 35667888888999999753 46789999986655544332 1 1126777765544432333 345579999988
Q ss_pred ecc--CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCCCC-CCCCCC
Q 006746 246 EFS--WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-MDSFGL 321 (632)
Q Consensus 246 ~~~--~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g~~-m~~ldl 321 (632)
+.. .+.+.+|+++|+++|.+.. ...+.+|+.+.-.+.+|..-|++ |+++||++|++++||+|+.+-.. ..++--
T Consensus 172 ~~~~~~~~~~id~~~le~aI~~~~--~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~ 249 (450)
T 3bc8_A 172 ENVLEGDELRTDLKAVEAKIQELG--PEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQ 249 (450)
T ss_dssp CCEEETTEEECCHHHHHHHHHHHC--GGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHH
T ss_pred EeeecCccCCcCHHHHHHHHHhcC--CCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHH
Confidence 662 2467899999999998642 12344444444444456889999 99999999999999998765220 001100
Q ss_pred CC---CCCcEEEEccccccCCCCCceEEEEEeC
Q 006746 322 SL---VRPDFLICSFYQIFGENPSGFGCLFVKK 351 (632)
Q Consensus 322 s~---~~~Df~~~S~hK~~G~~P~G~G~L~Vr~ 351 (632)
+. -++|+++.|.||+++. |.|.++|++|+
T Consensus 250 ~a~~~~~AD~~v~S~HK~l~a-~~~~~~l~~rd 281 (450)
T 3bc8_A 250 QGARVGRIDAFVQSLDKNFMV-PVGGAIIAGFN 281 (450)
T ss_dssp HHHHHSCCCEEEEEHHHHHSC-CSSCEEEEESC
T ss_pred HHhcccCCCEEEECCccCCCc-hhccEEEEecC
Confidence 11 2689999999998887 99999999974
No 226
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.42 E-value=4.4e-12 Score=137.25 Aligned_cols=209 Identities=15% Similarity=0.164 Sum_probs=131.7
Q ss_pred CCceEeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHHHHHHHH
Q 006746 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (632)
Q Consensus 107 ~~~vyLD~ag~------gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~~R~~ia 180 (632)
++..|+|.++. |+.++.+++++.+.+... . + ++. ..+...+.+++++
T Consensus 50 ~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---------------------~-~----~~~-~~~~~~~l~~~l~ 102 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGHAHPKVLARVRETLERG---------------------L-T----FGA-PSPLEVALAKKVK 102 (424)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC---------------------S-C----CSS-CCHHHHHHHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhC---------------------C-C----CCC-CCHHHHHHHHHHH
Confidence 45779998753 456788888876543210 0 0 111 2355678899999
Q ss_pred HHcCCCCCCccEEEeCCHHHHHHHHHhhC-CCCCCCeEE-EeccccchhhHHHHHH-H--------HhcCC------EEE
Q 006746 181 DFLNISENDYGMVFTANRTSAFKLLAESY-PFMSVKNLL-TVYDYESEAVEAMIRT-S--------EKRGA------RVM 243 (632)
Q Consensus 181 ~~l~a~~~ey~vvft~naT~al~lv~~sl-~~~~gd~il-t~~d~~s~~v~~~~~~-a--------~~~G~------~v~ 243 (632)
++++ .++ .|+||+|+|+|+.+++... .+..+++|+ ....||......+... . ...|+ .+.
T Consensus 103 ~~~~-~~~--~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~ 179 (424)
T 2e7u_A 103 RAYP-FVD--LVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTL 179 (424)
T ss_dssp HHCT-TCC--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEE
T ss_pred HhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceE
Confidence 9986 443 7999999999999888751 123456655 4445664211111000 0 01232 344
Q ss_pred EEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccCCCCCCC
Q 006746 244 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALGPKDMDS 318 (632)
Q Consensus 244 ~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~g~~m~~ 318 (632)
.++. .|.++|+++|++.. .++++|.+..+.+.||...| ++ +.++ +++|+++++|.++. |.-...
T Consensus 180 ~~~~------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~~g~ 248 (424)
T 2e7u_A 180 VLEY------NDPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFRLAF 248 (424)
T ss_dssp EECT------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTTSST
T ss_pred eCCC------CCHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccccch
Confidence 4432 37889999887421 23578888777777999998 99 9999 99999999999987 220011
Q ss_pred ---CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 319 ---FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 319 ---ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
++.-...+|++ ++.|.+|. ...+|+++++++.++.+.+
T Consensus 249 ~~~~~~~~~~~di~--s~sK~l~~-G~~~G~~~~~~~~~~~~~~ 289 (424)
T 2e7u_A 249 GGATELLGLKPDLV--TLGKILGG-GLPAAAYAGRREIMEKVAP 289 (424)
T ss_dssp THHHHHHTCCCSEE--EECGGGGT-TSSCEEEEECHHHHTTBTT
T ss_pred hHHHHHhCCCcchh--hhhhhhhC-CcceEEEEEcHHHHhhhcc
Confidence 11112357876 66798873 3458999999887766654
No 227
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.37 E-value=8.3e-12 Score=140.39 Aligned_cols=156 Identities=15% Similarity=0.114 Sum_probs=110.1
Q ss_pred ccEEEeCCHHHHHHHHHhhC----CCCCCCeEEEe-ccccchhhHHHHHHHHhcCCEEEEEeccCCc-cccCHHHHHHHH
Q 006746 190 YGMVFTANRTSAFKLLAESY----PFMSVKNLLTV-YDYESEAVEAMIRTSEKRGARVMSAEFSWPR-LRINSEKLRKMV 263 (632)
Q Consensus 190 y~vvft~naT~al~lv~~sl----~~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~-~~i~~~~l~~~i 263 (632)
.+|++|+|+++|+.+++..+ -..+||+|++. ..|+. ...... ....|++++.++.+..+ ..+|.++|++.+
T Consensus 166 ~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~--~~~~~~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 242 (546)
T 2zy4_A 166 VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTP--YIEIPE-LAQYALEEVAINADPSLNWQYPDSELDKLK 242 (546)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHH--HHHHHH-STTSCCEEEEEECBGGGTTBCCHHHHGGGG
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCcc--HHHHHH-HcCCCcEEEEEecCcccCCCCCHHHHHHhh
Confidence 37999999999999999873 25789997654 45553 222111 23457999999886322 358899887765
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH----HHHHH--hhCCcEEEEeccccCCCCCCCCCCCC--CCCcEEEEcccc
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIA--QENDWHILIDACALGPKDMDSFGLSL--VRPDFLICSFYQ 335 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~----i~~~a--~~~g~~vlvDaaq~~g~~m~~ldls~--~~~Df~~~S~hK 335 (632)
.. +++++.++..+|+||..+|.+ |+++| +++|+++++|.++..... ....+.. .+.++++.|+.|
T Consensus 243 ~~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~-~~~s~~~~~~~~~i~~~S~SK 315 (546)
T 2zy4_A 243 DP------AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFAD-DFQSLFAICPENTLLVYSFSK 315 (546)
T ss_dssp ST------TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGST-TCCCHHHHCGGGEEEEEESTT
T ss_pred CC------CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcc-cCcCHHHhCCCCEEEEEeCcc
Confidence 43 368999999999999999855 56777 788999999998763211 1111111 135799999999
Q ss_pred ccCCCCCc--eEEEEEeCC-Ccccc
Q 006746 336 IFGENPSG--FGCLFVKKS-TVPIL 357 (632)
Q Consensus 336 ~~G~~P~G--~G~L~Vr~~-~~~~L 357 (632)
.+|. +| +|++++.++ +++.+
T Consensus 316 ~~g~--~GlRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 316 YFGA--TGWRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp TTTC--GGGCEEEEEEESSCHHHHH
T ss_pred ccCC--CCcceEEEEECCHHHHHHH
Confidence 9994 47 699999886 55444
No 228
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.34 E-value=1.8e-10 Score=124.42 Aligned_cols=357 Identities=13% Similarity=0.118 Sum_probs=209.6
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccch--hHHHHHHHHHHHHHcCCCCCCccE
Q 006746 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE--SGLESAMKKRIMDFLNISENDYGM 192 (632)
Q Consensus 115 ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~--~~~~~~~R~~ia~~l~a~~~ey~v 192 (632)
++-...|+.|++++-..+... |--+-|..++ ||+-+ .++..-++++++++||++..+|.|
T Consensus 61 ASEN~~S~aV~~a~gS~ltnK-----------------YaEGyPg~Ry-YgGce~vD~iE~la~~rak~lF~a~~A~w~V 122 (490)
T 3ou5_A 61 ASENFCSRAALEALGSCLNNK-----------------YSEGYPGKRY-YGGAEVVDEIELLCQRRALEAFDLDPAQWGV 122 (490)
T ss_dssp TTCCCCCHHHHHHHTSGGGTC-----------------CCCC-----------CHHHHHHHHHHHHHHHHTTCCTTTEEE
T ss_pred cCCCcCCHHHHHHhcCccccc-----------------ccCCCCCccc-cCCChHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 666789999999977655431 1113344443 55443 567778899999999998765432
Q ss_pred -EEeCCHHHHHHHHHhhCCCCCCCeEEEe-c---cccchhhHHHHHH----HHhcCCEEEEEeccCCccccCHHHHHHHH
Q 006746 193 -VFTANRTSAFKLLAESYPFMSVKNLLTV-Y---DYESEAVEAMIRT----SEKRGARVMSAEFSWPRLRINSEKLRKMV 263 (632)
Q Consensus 193 -vft~naT~al~lv~~sl~~~~gd~ilt~-~---d~~s~~v~~~~~~----a~~~G~~v~~v~~~~~~~~i~~~~l~~~i 263 (632)
|=.-|++.|.-.+..++ .+|||+|+.. . .|-+. -.+... ...+-.++...+++..++.||.+++++..
T Consensus 123 NVQP~SGs~AN~avy~Al-l~PGD~ilg~~l~~GGHltH--g~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A 199 (490)
T 3ou5_A 123 NVQPYSGSPANLAVYTAL-LQPHDRIMGLDLPDGGHLTH--GYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTA 199 (490)
T ss_dssp ECCCSSHHHHHHHHHHHH-CC-CCCEECBC------------------------------CBCEETTTTEECHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHH-cCCCCEEEecccCCCCcccc--cccCCCcccccccccccccccccCCCCCcccHHHHHHHH
Confidence 23348889999999998 7999998732 2 33221 110000 01111234444566678899999999988
Q ss_pred HhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEEeccccCC-----CCCCCCCCCCCCCcEEEEcccc-c
Q 006746 264 VSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGP-----KDMDSFGLSLVRPDFLICSFYQ-I 336 (632)
Q Consensus 264 ~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlvDaaq~~g-----~~m~~ldls~~~~Df~~~S~hK-~ 336 (632)
...+ ++|+++-... .-..+|++ +.++|.+.|+++++|+||.+| .-..|++ .+|++.++.|| +
T Consensus 200 ~~~k-----PklIi~G~Sa--Y~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~----~ADvVTtTTHKTL 268 (490)
T 3ou5_A 200 RLFR-----PRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----HADIVTTTTHKTL 268 (490)
T ss_dssp HHHC-----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG----TCSEEEEESSSTT
T ss_pred hhcC-----CCeEEECCcc--CccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc----cceEEeccccccc
Confidence 7653 6887776653 34568999 999999999999999998774 2123554 37999999999 5
Q ss_pred cCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCCCCCccccchhhhhhhccccCCCccchhhhhhc
Q 006746 337 FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQS 416 (632)
Q Consensus 337 ~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~ 416 (632)
.| |. -|+++.+++... ..+.. | -- ..+ +++ ..+. . .-|.+ ..
T Consensus 269 rG--Pr-GG~Il~~~~~~~-~~~k~-~-~~-------~~~--------~~~-----kkin----~-aVFPg-------~q 310 (490)
T 3ou5_A 269 RG--AR-SGLIFYRKGVKA-VDPKT-G-RE-------IPY--------TFE-----DRIN----F-AVFPS-------LQ 310 (490)
T ss_dssp CS--CS-CEEEEEECSEEE-ECC---C-CE-------EEC--------CCH-----HHHH----H-HHTTT-------TC
T ss_pred cC--CC-ceEEEecccccc-ccccc-c-ch-------hHH--------HHH-----HHHH----h-hcCcc-------cc
Confidence 56 86 477777775421 11110 1 00 000 000 0000 0 01111 13
Q ss_pred CCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEE
Q 006746 417 GKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVK 496 (632)
Q Consensus 417 Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~ 496 (632)
|.|+...|.++. .+|.....-....-.+++..-++.|-+.|.+. |.+
T Consensus 311 ggp~~h~IAAkA------------------------Vaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~------G~~--- 357 (490)
T 3ou5_A 311 GGPHNHAIAAVA------------------------VALKQACTPMFREYSLQVLKNARAMADALLER------GYS--- 357 (490)
T ss_dssp SSCCHHHHHHHH------------------------HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT------TCE---
T ss_pred ccchHHHHHHHH------------------------HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC------CCe---
Confidence 556666677665 55554433334556667777777888888876 644
Q ss_pred EECCCCCCCCCcEEEEEEccCCCCccCHHHHHHHHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhcccccccccccc
Q 006746 497 IYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRK 576 (632)
Q Consensus 497 Iygp~~~~~rg~ivaFnv~~~~G~~i~~~~V~kla~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 576 (632)
|.+.. -....+-+.+.+. | +....+++++++.||.+--- . .+.+
T Consensus 358 vvsGg---TdnHlvLvDl~~~-g--~tG~~ae~~Le~agItvNkN---~-------------------------iP~D-- 401 (490)
T 3ou5_A 358 LVSGG---TDNHLVLVDLRPK-G--LDGARAERVLELVSITANKN---T-------------------------CPGD-- 401 (490)
T ss_dssp EGGGS---CSSSEEEEECGGG-T--CCHHHHHHHHHHTTEECEEE---C-------------------------CTTC--
T ss_pred eecCC---CCceEEEEecccc-C--CCHHHHHHHHHHcCcEECCC---C-------------------------CCCC--
Confidence 43321 1245666666542 2 78889999999999986310 0 0110
Q ss_pred ccCCCCCcEEEEccCCCC----CHHHHHHHHHHHHHhhh
Q 006746 577 DKANLGITVVTASLGYLA----NFEDVYRLWAFVAQFLD 611 (632)
Q Consensus 577 ~~~~~~~~~VRvSlg~~~----t~eDV~rlv~~l~~~l~ 611 (632)
+...-.+.||+...-+| .++|+..+.++|.+.|+
T Consensus 402 -~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 402 -RSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp -CCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 12233568999976655 67999999999988775
No 229
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.72 E-value=6e-12 Score=138.74 Aligned_cols=173 Identities=12% Similarity=0.061 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEE-eccccchhhHHHHHHHHhcCC--EEEEE
Q 006746 170 GLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLT-VYDYESEAVEAMIRTSEKRGA--RVMSA 245 (632)
Q Consensus 170 ~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt-~~d~~s~~v~~~~~~a~~~G~--~v~~v 245 (632)
+...+..++|+++++ ..+ .++|++++|+|+..++.... +..+++|+. ...||......+.. ....|+ .+..+
T Consensus 140 ~~~~~Lae~L~~~~p-~~~--~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg-~~~~g~~~~~~~~ 215 (465)
T 2yky_A 140 ENEALFAEAVCDRFP-SID--LVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASG-HAPTNAPYHVVLG 215 (465)
Confidence 445578888999985 222 58999999999999887653 334466664 45676533322200 112344 22223
Q ss_pred eccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccCCCC--CCC
Q 006746 246 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALGPKD--MDS 318 (632)
Q Consensus 246 ~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~g~~--m~~ 318 (632)
+. -|+++|+++|++. ..++++|++..+.+.+|...| ++ +.++|+++|+++++|.++. ... +..
T Consensus 216 ~~------~d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a 285 (465)
T 2yky_A 216 VY------NDVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGA 285 (465)
Confidence 22 2677888888732 124577777776666999888 88 9999999999999999987 321 111
Q ss_pred CCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 319 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 319 ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
.+.....||++ ++-|.+|. ...+|+++.++++++.+.+
T Consensus 286 ~~~~gv~pDi~--t~sK~lg~-G~piG~v~~~~~i~~~l~~ 323 (465)
T 2yky_A 286 QEMLGISADLT--TLGKYIGG-GMSFGAFGGRRDLMERFDP 323 (465)
Confidence 22222357876 45698883 2237899999988877655
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.07 E-value=5e-09 Score=113.64 Aligned_cols=255 Identities=14% Similarity=0.056 Sum_probs=154.4
Q ss_pred CCChhHHHHHHHHHHh--CCCCCC-chhHHHHHHhhccCcCCCCceEeecCCCC-----CCCHHHHHHHhcCCCCCCCCC
Q 006746 68 ESLPSLQQSLTEFTKA--YPQYFD-TYQIDQIRAKEYYQLSLSNHTCLDYFGIG-----LFSYNQLHKQESSPSHLRPSL 139 (632)
Q Consensus 68 ~~lp~l~~a~~~F~~~--~p~y~~-~~~~d~iR~~ef~~L~~~~~vyLD~ag~g-----l~~~~~~~a~~~~~~~~~~~~ 139 (632)
+.+-.-++-....+.. .|+-+- ...++.+-. +...+| .+. |++++|.| .++.-|.+.|..+..-+-
T Consensus 23 ~~~~~~~~~~~~ll~~r~~P~~g~~d~~ie~~l~-~la~md-snn-~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiG--- 96 (501)
T 3hl2_A 23 EARRSHEHLIRLLLEKGKCPENGWDESTLELFLH-ELAIMD-SNN-FLGNCGVGEREGRVASALVARRHYRFIHGIG--- 96 (501)
T ss_dssp CCTHHHHHHHHHHHHHCCCCSSCCCHHHHHHHHH-HHHTTB-GGG-CSSCCCCSSCCCCCSCHHHHHHTTTCCSCBS---
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCHHHHHHHHH-HHHhhc-cCC-CcccCCcccchHHHHHHHHHhhccCcccCCC---
Confidence 4444545555555553 576553 356666664 577775 334 89999988 788888887655432111
Q ss_pred CCCCCCCccccccccccccccccc--cccc-hhHHHHHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhC-C-CCC-
Q 006746 140 PSQNLDIPFFSVSYKTGNLKTQLL--HGGQ-ESGLESAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESY-P-FMS- 213 (632)
Q Consensus 140 P~~~~~~p~f~~~~~~~n~~s~~~--~g~~-~~~~~~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl-~-~~~- 213 (632)
.++|+...-+ -|.. ...+-+..-..+.+.+|.+.. -..++++++|.+...++-+. . -++
T Consensus 97 --------------RSGd~~~~QPKAaGssll~~ltn~l~ld~L~~~G~~~~-~~~flVnGsTgg~lamilaa~r~~rpg 161 (501)
T 3hl2_A 97 --------------RSGDISAVQPKAAGSSLLNKITNSLVLDIIKLAGVHTV-ANCFVVPMATGMSLTLCFLTLRHKRPK 161 (501)
T ss_dssp --------------CSSCTTCCCTTBHHHHHHHHHHHHHHHHHHHHTTCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTT
T ss_pred --------------CccccccCCCCccchHHHHHHHHHHHHHHHHHcCCCCC-CcEEEECcHHHHHHHHHHHHcCcccCC
Confidence 1233221110 0111 123333444444556698853 26888999996666554443 1 112
Q ss_pred CCeEEEec-cccchhhHHHHHHHHhcCCEEEEEecc--CCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCC-Ccccc
Q 006746 214 VKNLLTVY-DYESEAVEAMIRTSEKRGARVMSAEFS--WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRM-TGARY 289 (632)
Q Consensus 214 gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v~~~--~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~-TG~~~ 289 (632)
+++|+.+- .|.| .+..+ .-.|+++++++.. .+...+|+++++++|++.. ... .+++++..++. .|..-
T Consensus 162 ~d~VIvpRn~HKS-v~kAl----iL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~g--a~~-i~~V~~Ttt~y~p~~~d 233 (501)
T 3hl2_A 162 AKYIIWPRIDQKS-CFKSM----ITAGFEPVVIENVLEGDELRTDLKAVEAKVQELG--PDC-ILCIHSTTSCFAPRVPD 233 (501)
T ss_dssp CCEEEEECCCCHH-HHHHH----HHTTCEEEEECEEEETTEEEECHHHHHHHHHHHC--GGG-EEEEEEECSCCTTBCCC
T ss_pred CCEEEEecchHHH-HHHHH----HHcCCeEEEEeeeecccccCCCHHHHHHHHHhcC--CCc-EEEEEecCCCCCCcccc
Confidence 48877664 5655 55543 3469999999763 3457789999999998742 112 34444444433 44668
Q ss_pred chH-HHHHHhhCCcEEEEeccccCCCCC-CCCCCC--CCC-CcEEEEccccccCCCCCceEEEEEeCC
Q 006746 290 PYL-WMRIAQENDWHILIDACALGPKDM-DSFGLS--LVR-PDFLICSFYQIFGENPSGFGCLFVKKS 352 (632)
Q Consensus 290 pl~-i~~~a~~~g~~vlvDaaq~~g~~m-~~ldls--~~~-~Df~~~S~hK~~G~~P~G~G~L~Vr~~ 352 (632)
|++ |+++||++|++++||.|+.+-... ..+--+ ..+ +|+++.|.||++-. |.|-|+++++++
T Consensus 234 dI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llv-pIGG~ii~~~d~ 300 (501)
T 3hl2_A 234 RLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMV-PVGGAIIAGFND 300 (501)
T ss_dssp CHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCC-CSSCEEEEESCH
T ss_pred cHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEeccccccee-ecCceEEEeCCH
Confidence 999 999999999999999876652100 000000 124 89999999996655 888777777754
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.04 E-value=4.5e-09 Score=115.32 Aligned_cols=170 Identities=12% Similarity=0.134 Sum_probs=107.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHHH-HHhcCCEEEEEeccC
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIRT-SEKRGARVMSAEFSW 249 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~~-a~~~G~~v~~v~~~~ 249 (632)
.+..++|++.+.- ...|.|++++|+|...+++... +...++|+ ....||......+... .......+..+|.
T Consensus 130 ~~lae~l~~~~p~---~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-- 204 (454)
T 4ao9_A 130 GRLARLICERFPQ---IEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-- 204 (454)
T ss_dssp HHHHHHHHHHSTT---CSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT--
T ss_pred HHHHHHHHHhCCC---CCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC--
Confidence 3566778888753 2279999999999887665432 22334565 4446665322111000 0011123333332
Q ss_pred CccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEeccccCCCCCCCCCC---
Q 006746 250 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDACALGPKDMDSFGL--- 321 (632)
Q Consensus 250 ~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~g~~m~~ldl--- 321 (632)
-|.+.+++.|.+.. ..+..|++--+....|.+.| ++ +.++|+++|+++|+|-+|.+ . ......
T Consensus 205 ----nd~~~l~~~l~~~~---~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R-~G~~~a~e~ 275 (454)
T 4ao9_A 205 ----NDAQTARAQIERHG---PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-R-LAPHGLANK 275 (454)
T ss_dssp ----TCHHHHHHHHHHTG---GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-G-GSTTCHHHH
T ss_pred ----chHHHHHHHHhhcC---CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-C-Cccccchhc
Confidence 36788998887642 34677888878888999988 78 88999999999999998874 2 011111
Q ss_pred CCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 322 SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 322 s~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
-...||+++++ |.+|. ...+|++..++++++.+.+
T Consensus 276 ~gv~PDi~t~g--K~lgg-G~Piga~~~~~ei~~~~~~ 310 (454)
T 4ao9_A 276 LGIRSDLTTLG--KYIGG-GMSFGAFGGRADVMALFDP 310 (454)
T ss_dssp HTCCCSEEEEE--GGGGT-TSSCEEEEECHHHHGGGCT
T ss_pred cCCCCcEEEec--cccCC-CCcceeeeeHHHHHHHHhh
Confidence 12368998765 74432 2248999999998876654
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.00 E-value=3.4e-08 Score=108.52 Aligned_cols=312 Identities=14% Similarity=0.137 Sum_probs=175.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEE-EeccccchhhHHHHHHHH----hc-----CCE
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP-FMSVKNLL-TVYDYESEAVEAMIRTSE----KR-----GAR 241 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~-~~~gd~il-t~~d~~s~~v~~~~~~a~----~~-----G~~ 241 (632)
.+.-+++.+++..+.- ..+.|++++|+|...+++--. +....+|+ ....||......+.-... +. ...
T Consensus 110 ~~lae~L~~~~p~~~~-~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~ 188 (456)
T 4atq_A 110 VAVTEQLNRLTPGDHA-KRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPE 188 (456)
T ss_dssp HHHHHHHHHHSSCSSC-EEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSS
T ss_pred HHHHHHHHHhCCCCCC-cEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCcccc
Confidence 3566777888754322 268999999999987665422 12234465 445788643322211100 01 124
Q ss_pred EEEEeccCCc----cc-cCHHHHHHHHH---hcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhCCcEEEEec
Q 006746 242 VMSAEFSWPR----LR-INSEKLRKMVV---SKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQENDWHILIDA 308 (632)
Q Consensus 242 v~~v~~~~~~----~~-i~~~~l~~~i~---~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~g~~vlvDa 308 (632)
+..+|...+. .. .+.+.+++.++ ... ....+..|++--+....|...| ++ +.++|+++|+++|+|-
T Consensus 189 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DE 267 (456)
T 4atq_A 189 VYRMPMSYPFREENPEITGAEAAKRAITMIEKQI-GGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADE 267 (456)
T ss_dssp EEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEEC
T ss_pred ceecccccccccCCCcccHHHHHHHHHHHHHHhh-cCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecc
Confidence 5566653211 11 12333333332 211 1235677777777777898876 55 7789999999999999
Q ss_pred cccC-CCC--CCCCCCCCCCCcEEEEcccc-ccCCCCCceEEEEEeCCCccccCCCCCCCceeecccccccccccccCCC
Q 006746 309 CALG-PKD--MDSFGLSLVRPDFLICSFYQ-IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSC 384 (632)
Q Consensus 309 aq~~-g~~--m~~ldls~~~~Df~~~S~hK-~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~~~~~~~~ 384 (632)
+|.+ |.. +--.+.-...||+++++ | +-|. .-+|++.++++.++.+.+...|++ |
T Consensus 268 V~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg--~P~~av~~~~~i~~~~~~~~~~~T----------f-------- 325 (456)
T 4atq_A 268 VQSGFCRTGEWFAVDHEGVVPDIITMA--KGIAGG--LPLSAITGRADLLDAVHPGGLGGT----------Y-------- 325 (456)
T ss_dssp TTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTT--SSCEEEEEEHHHHTTSCTTSSCCS----------S--------
T ss_pred cccccCCccccccccccCCCCchhhhh--hcccCc--CCceeeEecHHHHhcccccCCCCC----------C--------
Confidence 9886 321 11111122369999887 7 4332 237899999988776655322211 1
Q ss_pred CCCccccchhhhhhhccccCCCccchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHHHHHhhCHH
Q 006746 385 ETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLT 464 (632)
Q Consensus 385 ~~e~~~~~~~~~e~e~gt~~f~~~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd~~~~~Gl~ 464 (632)
.| .+++. ..++ +.|+.+.+.+
T Consensus 326 ---------------~g-----npla~------------aaal-------------------------a~L~~i~~~~-- 346 (456)
T 4atq_A 326 ---------------GG-----NPVAC------------AAAL-------------------------AAIDTMEQHD-- 346 (456)
T ss_dssp ---------------SS-----CHHHH------------HHHH-------------------------HHHHHHHHTT--
T ss_pred ---------------CC-----ChHHH------------HhhH-------------------------HHHHHHhhcc--
Confidence 00 01110 1111 5677776644
Q ss_pred HHHHHHHHHHHHHHHHHHccC--CCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCCccCHH---HHHHHHHhCCcEEc
Q 006746 465 MISRRGRCLINWLVNALMKLQ--HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPV---LVQKLADRENISLS 539 (632)
Q Consensus 465 ~I~~r~~~L~~~L~~~L~~l~--h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~~i~~~---~V~kla~~~gI~lr 539 (632)
+.+|++.+.++|.+.|.+|. ++.. +.|.| +. + .-+|-++++.+.+.....-+.+ .+.+.+-++|+.++
T Consensus 347 -l~~~~~~~g~~l~~~L~~l~~~~~~~-~~~~v---~~-V-RG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~ 419 (456)
T 4atq_A 347 -LNGRARHIEELALGKLRELAAELSAG-GGSVV---GD-I-RGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIIL 419 (456)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHCC------CE---EE-E-EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECE
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcccc-cCCce---EE-e-eecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEE
Confidence 56777778888888777662 1110 01222 11 0 1246788887765322111222 23344445777764
Q ss_pred cCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHhhhh
Q 006746 540 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 612 (632)
Q Consensus 540 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~l~~ 612 (632)
.. + ....+||+++.+..|.+||+.+++.|.+-|++
T Consensus 420 ~~-------------------------g-------------~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 420 TC-------------------------G-------------TYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp EE-------------------------C-------------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ec-------------------------C-------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 21 0 12248999999999999999999999988765
No 233
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=98.95 E-value=3.5e-08 Score=106.67 Aligned_cols=166 Identities=11% Similarity=0.102 Sum_probs=109.9
Q ss_pred HHHHHHHHHc-CC-----CCCCccEEEeCCHHHHHHHHHhhCC-CCCCCeEEEec-cccchhhHHHHHHHHhcCCEEEEE
Q 006746 174 AMKKRIMDFL-NI-----SENDYGMVFTANRTSAFKLLAESYP-FMSVKNLLTVY-DYESEAVEAMIRTSEKRGARVMSA 245 (632)
Q Consensus 174 ~~R~~ia~~l-~a-----~~~ey~vvft~naT~al~lv~~sl~-~~~gd~ilt~~-d~~s~~v~~~~~~a~~~G~~v~~v 245 (632)
+.|+.|++++ +. ++++.+|+.|.++++|+.+++..+- +.+ |+|++.. .|+. ....++..|++++.+
T Consensus 76 ~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~-----~~~~~~~~g~~~~~v 149 (405)
T 3k7y_A 76 DFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYIN-----HVNMIESRGFNLKYI 149 (405)
T ss_dssp HHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHH-----HHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHh-----HHHHHHHcCCeEEEE
Confidence 5777777765 21 2233357999999999999998762 337 8877543 4432 234567789999999
Q ss_pred ec-cCCccccCHHHHHHHHHhcCcCCCceeEEEEec-cCCCCccccchH-H---HHHHhhCCcEEEEecccc-CCCC-CC
Q 006746 246 EF-SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYPYL-W---MRIAQENDWHILIDACAL-GPKD-MD 317 (632)
Q Consensus 246 ~~-~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~-~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaaq~-~g~~-m~ 317 (632)
|. +..+..+|.++|++.+.+.. +++++.+.. .+|+||..++.+ | +++|++++++++.|-+-. ...+ ..
T Consensus 150 ~~~~~~~~~~d~~~l~~~l~~~~----~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~ 225 (405)
T 3k7y_A 150 NFFDYNLIDINYDLFLNDLRNIP----NGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLE 225 (405)
T ss_dssp CCEETTTTEECHHHHHHHHHHSC----SSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTT
T ss_pred eccccccCCcCHHHHHHHHHhCC----CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcc
Confidence 88 32346789999999997521 236666644 479999999876 4 567889999999997632 1110 00
Q ss_pred ----CC-CC-CCCCCcEEEEccccccCCCCCceEEEEE
Q 006746 318 ----SF-GL-SLVRPDFLICSFYQIFGENPSGFGCLFV 349 (632)
Q Consensus 318 ----~l-dl-s~~~~Df~~~S~hK~~G~~P~G~G~L~V 349 (632)
++ .+ +...-=+++.|+-|.||.+--.+|++++
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 226 EDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp GGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred cchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 00 00 1112237788999999864345688764
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.82 E-value=6.9e-07 Score=98.50 Aligned_cols=313 Identities=13% Similarity=0.106 Sum_probs=176.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHhhCC------CCCCC-eEEE-eccccchhhHHHHHHH----HhcC-
Q 006746 173 SAMKKRIMDFLNISENDYGMVFTANRTSAFKLLAESYP------FMSVK-NLLT-VYDYESEAVEAMIRTS----EKRG- 239 (632)
Q Consensus 173 ~~~R~~ia~~l~a~~~ey~vvft~naT~al~lv~~sl~------~~~gd-~ilt-~~d~~s~~v~~~~~~a----~~~G- 239 (632)
.+.-++|.+++..+-+ .|.|++|+|+|...+++-.. -++++ +|+. ...||......|.-.- +..+
T Consensus 114 ~~lAe~L~~~~p~~~~--~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~ 191 (473)
T 4e3q_A 114 VMLSEKLVEVSPFDSG--RVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGL 191 (473)
T ss_dssp HHHHHHHHHHSSCSSC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTC
T ss_pred HHHHHHHHhhCCCCcc--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCC
Confidence 3566778888765433 69999999999887765421 12333 3554 4578864433321100 0111
Q ss_pred --CEEEEEeccC-----Ccccc-------CHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccc----hH-HHHHHhhC
Q 006746 240 --ARVMSAEFSW-----PRLRI-------NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YL-WMRIAQEN 300 (632)
Q Consensus 240 --~~v~~v~~~~-----~~~~i-------~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~p----l~-i~~~a~~~ 300 (632)
..+..++... ..+.. ..+++++.|.... ...+..|++.-+....|.+.| ++ +.++|+++
T Consensus 192 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~ 269 (473)
T 4e3q_A 192 PLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKY 269 (473)
T ss_dssp SCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT
T ss_pred CCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCHHHHHHHHHHhccc
Confidence 1233333210 01111 1234555555321 235788888888888899876 44 66889999
Q ss_pred CcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEccccccCCCCCceEEEEEeCCCccccCCCCCCCceeeccccccccc
Q 006746 301 DWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWL 377 (632)
Q Consensus 301 g~~vlvDaaq~~-g~~--m~~ldls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~~~~gG~v~~~~~~~~~~~ 377 (632)
|+++|+|-+|.+ |.. +--...-...||+++++ |.+|..-.-+|++.+++++++.+.+.... ...+.
T Consensus 270 gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~--K~l~gG~~Pl~av~~~~~i~~~~~~~~~~--------~~~~~- 338 (473)
T 4e3q_A 270 DIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISS--KNLTAGFFPMGAVILGPELSKRLETAIEA--------IEEFP- 338 (473)
T ss_dssp TCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEEC--GGGGTTSSCCEEEEECHHHHHHHHHHHHH--------HSCCC-
T ss_pred ceEEeccCccccCCcccchhHHHhcCCCCChHHhc--ccccCCCCCcccccccHHHHHHhcccccc--------ccccc-
Confidence 999999998875 321 11111122469998776 84431011279999999887655321000 00000
Q ss_pred ccccCCCCCCccccchhhhhhhccccCCCc-cchhhhhhcCCcccchhhHhhhhhhhhhhhhccCCCCCCCchhhhhHHH
Q 006746 378 TDEFSSCETEPEQTSKSKQEKVAATNTFSG-PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD 456 (632)
Q Consensus 378 ~~~~~~~~~e~~~~~~~~~e~e~gt~~f~~-~~~~~~~~~Gt~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~aLd 456 (632)
..+| |.+ +++. ..++ +.|+
T Consensus 339 ---------------------hg~T--~~Gnpla~------------Aaal-------------------------a~L~ 358 (473)
T 4e3q_A 339 ---------------------HGFT--ASGHPVGC------------AIAL-------------------------KAID 358 (473)
T ss_dssp ---------------------CCCT--TTTCHHHH------------HHHH-------------------------HHHH
T ss_pred ---------------------cCCC--CCCCcchh------------hhhh-------------------------hhhh
Confidence 0111 111 1110 1111 5666
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCCCCCCcEEEEEEccCCCC--ccC-----HHHHHH
Q 006746 457 QVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE--KIE-----PVLVQK 529 (632)
Q Consensus 457 ~~~~~Gl~~I~~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~~~rg~ivaFnv~~~~G~--~i~-----~~~V~k 529 (632)
.+++. .+.+|++.+..+|.++|.+|.. .|.|. . . .-+|-++++.+...+.. ..+ ...+.+
T Consensus 359 ~i~~~---~l~~~~~~~g~~l~~~L~~l~~-----~~~v~---~-v-RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~ 425 (473)
T 4e3q_A 359 VVMNE---GLAENVRRLAPRFEERLKHIAE-----RPNIG---E-Y-RGIGFMWALEAVKDKASKTPFDGNLSVSERIAN 425 (473)
T ss_dssp HHHHS---SHHHHHHHHHHHHHHHHHHHTT-----STTEE---E-E-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHH
T ss_pred hhccc---cHHHHHHHHHHHHHHHHHHHhc-----CCCee---E-E-eecceEEEEEEecCccccccccccHHHHHHHHH
Confidence 66654 4567888888999999988742 24331 1 0 12466777776432221 111 234555
Q ss_pred HHHhCCcEEccCccCChHHHhHHHHhhhhhhhhhhccccccccccccccCCCCCcEEEEccCCCCCHHHHHHHHHHHHHh
Q 006746 530 LADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 609 (632)
Q Consensus 530 la~~~gI~lr~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~VRvSlg~~~t~eDV~rlv~~l~~~ 609 (632)
.+-++|+.++.. + .+||+++.+..|.+||+.+++.+.+.
T Consensus 426 ~~~~~Gll~~~~----------------------------------------g-~~i~l~PPL~it~~eid~~~~~l~~a 464 (473)
T 4e3q_A 426 TCTDLGLICRPL----------------------------------------G-QSVVLCPPFILTEAQMDEMFDKLEKA 464 (473)
T ss_dssp HHHHTTEECEEE----------------------------------------T-TEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHCCcEEEec----------------------------------------C-CEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 555677766421 1 38999999999999999999999998
Q ss_pred hhhcc
Q 006746 610 LDADF 614 (632)
Q Consensus 610 l~~~f 614 (632)
|++-+
T Consensus 465 l~~v~ 469 (473)
T 4e3q_A 465 LDKVF 469 (473)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87643
No 235
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=98.66 E-value=1.8e-06 Score=93.71 Aligned_cols=227 Identities=12% Similarity=0.056 Sum_probs=133.0
Q ss_pred HHHHhhccCcCCCCceEeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccccccccccchhHHHHH
Q 006746 95 QIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA 174 (632)
Q Consensus 95 ~iR~~ef~~L~~~~~vyLD~ag~gl~~~~~~~a~~~~~~~~~~~~P~~~~~~p~f~~~~~~~n~~s~~~~g~~~~~~~~~ 174 (632)
+.+++.-|..++.=-+|.|--|-.+..++|.++.....+... ...|- | . .|. .+
T Consensus 38 ~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~---~~~Y~--p-----------~----~G~------p~ 91 (420)
T 4h51_A 38 RAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNL---DYEYL--P-----------I----SGY------QP 91 (420)
T ss_dssp HHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTC---CCCCC--C-----------T----TCC------HH
T ss_pred HHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCC---CCCCC--C-----------c----CCh------HH
Confidence 334433333333345799988888888998887543221100 00010 0 0 021 25
Q ss_pred HHHHHHHHc-C--CCCCCccEEEeCCHHHHHHHHHhhCC---CCCCCeEEEe-ccccchhhHHHHHHHHhcCCE-EEEEe
Q 006746 175 MKKRIMDFL-N--ISENDYGMVFTANRTSAFKLLAESYP---FMSVKNLLTV-YDYESEAVEAMIRTSEKRGAR-VMSAE 246 (632)
Q Consensus 175 ~R~~ia~~l-~--a~~~ey~vvft~naT~al~lv~~sl~---~~~gd~ilt~-~d~~s~~v~~~~~~a~~~G~~-v~~v~ 246 (632)
.|+.+++++ | .+.+....+-|.++|.|++..+..+- ..+||+|+++ -.+++ +.. ..+..|++ |...+
T Consensus 92 lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~--y~~---i~~~aG~~~V~~~~ 166 (420)
T 4h51_A 92 FIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPN--HYG---VVKAAGWKNICTYA 166 (420)
T ss_dssp HHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTH--HHH---HHHHTTCCCEEEEE
T ss_pred HHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchh--HHH---HHHHcCCeEEEeec
Confidence 677777764 3 22222234558899999887665442 3689997654 34442 222 33556776 44443
Q ss_pred c-cCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-H---HHHHhhCCcEEEEecc-ccCCCC---CC
Q 006746 247 F-SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-W---MRIAQENDWHILIDAC-ALGPKD---MD 317 (632)
Q Consensus 247 ~-~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i---~~~a~~~g~~vlvDaa-q~~g~~---m~ 317 (632)
. +..+..++.+.+.+.+...+ +++.++...-.+|+||..++.+ | +++|++++++++.|-+ +-+... ..
T Consensus 167 ~~~~~~~~~d~~~~~~~l~~~~---~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~ 243 (420)
T 4h51_A 167 YYDPKTVSLNFEGMKKDILAAP---DGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTD 243 (420)
T ss_dssp CEEGGGTEECHHHHHHHHHHSC---SSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHH
T ss_pred cccccccCCCHHHHHHHHhccC---CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccc
Confidence 3 22445678888888887543 3457777788899999999876 5 5678899999999986 322210 00
Q ss_pred CC----CCCCCCCcEEEEccccccCCCCCceEEEEEeCCCcc
Q 006746 318 SF----GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVP 355 (632)
Q Consensus 318 ~l----dls~~~~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~ 355 (632)
.. ..+....=+++.||-|.||.+-.-+|++.+..+..+
T Consensus 244 ~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~ 285 (420)
T 4h51_A 244 AYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKT 285 (420)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHH
T ss_pred hHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHH
Confidence 00 001112236777999988864344899988766543
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.00 E-value=4.6e-05 Score=89.50 Aligned_cols=101 Identities=10% Similarity=0.121 Sum_probs=61.9
Q ss_pred HHHHHHHHhcC--cCCCceeEEEEecc-CCCCccccc----hH-HHHHHhhCCcEEEEeccccC-CCC--CCCCCCCCCC
Q 006746 257 EKLRKMVVSKG--KKKKQRGLFVFPLH-SRMTGARYP----YL-WMRIAQENDWHILIDACALG-PKD--MDSFGLSLVR 325 (632)
Q Consensus 257 ~~l~~~i~~~~--~~~~~~~Lv~~~~~-sn~TG~~~p----l~-i~~~a~~~g~~vlvDaaq~~-g~~--m~~ldls~~~ 325 (632)
+.|++.|.+.. ....++..|++--+ ....|...| ++ +.++|+++|+++++|-+|.+ |.. +.....-...
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~ 656 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK 656 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC
Confidence 45666664210 11235677777775 888898886 77 88999999999999987663 321 1111111236
Q ss_pred CcEEEEccccccCCCCCceEEEEEeCCCccccCC
Q 006746 326 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 359 (632)
Q Consensus 326 ~Df~~~S~hK~~G~~P~G~G~L~Vr~~~~~~L~~ 359 (632)
||+++ +=|.+|..---+|++.+++++++.+.+
T Consensus 657 PDiit--lsK~L~gG~~Plgav~~~~~i~~~~~~ 688 (831)
T 4a0g_A 657 PDIAC--FAKLLTGGMVPLAVTLATDAVFDSFSG 688 (831)
T ss_dssp CSEEE--ECGGGGTTSSCCEEEEECHHHHHTTCS
T ss_pred CcEEE--EecccccCccCcEEEEECHHHHHHHhc
Confidence 89875 459665200125999999987765543
No 237
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=54.20 E-value=2.2 Score=29.16 Aligned_cols=12 Identities=33% Similarity=0.387 Sum_probs=9.2
Q ss_pred hhhhhHHHHhhc
Q 006746 45 DCRRDFAAVTAS 56 (632)
Q Consensus 45 ~~~~~f~~~~~~ 56 (632)
.+||+|||+++.
T Consensus 3 lsRR~FLK~~aa 14 (35)
T 2pq4_B 3 LSRRSFMKANAV 14 (35)
T ss_dssp CCSHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 379999996554
No 238
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=35.79 E-value=1.2e+02 Score=27.50 Aligned_cols=76 Identities=11% Similarity=0.105 Sum_probs=50.0
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.|.|.--...+..+.+..|.+|..+..+ ++++++.+.+.+. ...++.++... +.....+. +++.+++
T Consensus 28 gd~HdiG~~~va~~l~~~G~eVi~lG~~-----~p~e~lv~aa~~~-----~~diV~lS~~~--~~~~~~~~~~i~~L~~ 95 (161)
T 2yxb_A 28 LDGHDRGAKVVARALRDAGFEVVYTGLR-----QTPEQVAMAAVQE-----DVDVIGVSILN--GAHLHLMKRLMAKLRE 95 (161)
T ss_dssp SSSCCHHHHHHHHHHHHTTCEEECCCSB-----CCHHHHHHHHHHT-----TCSEEEEEESS--SCHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHhc-----CCCEEEEEeec--hhhHHHHHHHHHHHHh
Confidence 3655434455566778899999877654 6788888888754 25788887653 34455566 7777777
Q ss_pred CC---cEEEEec
Q 006746 300 ND---WHILIDA 308 (632)
Q Consensus 300 ~g---~~vlvDa 308 (632)
.| +.++|=+
T Consensus 96 ~g~~~i~v~vGG 107 (161)
T 2yxb_A 96 LGADDIPVVLGG 107 (161)
T ss_dssp TTCTTSCEEEEE
T ss_pred cCCCCCEEEEeC
Confidence 54 5555543
No 239
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.79 E-value=1.1e+02 Score=26.70 Aligned_cols=81 Identities=7% Similarity=-0.006 Sum_probs=52.7
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.|.|.--...+..+.+..|.+|..+..+ ++++++.+++.+.. ..+++++... +-....+. +++..++
T Consensus 13 ~d~HdiG~~~v~~~l~~~G~~Vi~lG~~-----~p~e~~v~~a~~~~-----~d~v~lS~~~--~~~~~~~~~~i~~l~~ 80 (137)
T 1ccw_A 13 SDCHAVGNKILDHAFTNAGFNVVNIGVL-----SPQELFIKAAIETK-----ADAILVSSLY--GQGEIDCKGLRQKCDE 80 (137)
T ss_dssp TCCCCHHHHHHHHHHHHTTCEEEEEEEE-----ECHHHHHHHHHHHT-----CSEEEEEECS--STHHHHHTTHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHhcC-----CCEEEEEecC--cCcHHHHHHHHHHHHh
Confidence 3555433445566778899999988654 67788888777542 4778887764 22223355 7777766
Q ss_pred C---CcEEEEeccccCC
Q 006746 300 N---DWHILIDACALGP 313 (632)
Q Consensus 300 ~---g~~vlvDaaq~~g 313 (632)
. ++.+++=++...|
T Consensus 81 ~g~~~i~v~vGG~~~~~ 97 (137)
T 1ccw_A 81 AGLEGILLYVGGNIVVG 97 (137)
T ss_dssp TTCTTCEEEEEESCSSS
T ss_pred cCCCCCEEEEECCCcCc
Confidence 4 4778876665544
No 240
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=27.40 E-value=2.7e+02 Score=25.88 Aligned_cols=77 Identities=12% Similarity=0.060 Sum_probs=51.6
Q ss_pred cccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhC
Q 006746 222 DYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN 300 (632)
Q Consensus 222 d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~ 300 (632)
|.|.-...-+....+..|.+|..+..+ +..+++.+.+.+. ++.+++++... +.....+. +++.+++.
T Consensus 99 d~H~iG~~~va~~l~~~G~~v~~LG~~-----vp~~~l~~~~~~~-----~~d~v~lS~~~--~~~~~~~~~~i~~l~~~ 166 (210)
T 1y80_A 99 DLHDIGKNLVAMMLESGGFTVYNLGVD-----IEPGKFVEAVKKY-----QPDIVGMSALL--TTTMMNMKSTIDALIAA 166 (210)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEECCSS-----BCHHHHHHHHHHH-----CCSEEEEECCS--GGGTHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc-----CCCEEEEeccc--cccHHHHHHHHHHHHhc
Confidence 666433344456678899999887654 6778988888654 25788887753 33444566 77788775
Q ss_pred C----cEEEEeccc
Q 006746 301 D----WHILIDACA 310 (632)
Q Consensus 301 g----~~vlvDaaq 310 (632)
| +.++|=++.
T Consensus 167 ~~~~~~~v~vGG~~ 180 (210)
T 1y80_A 167 GLRDRVKVIVGGAP 180 (210)
T ss_dssp TCGGGCEEEEESTT
T ss_pred CCCCCCeEEEECCC
Confidence 4 788886553
No 241
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=22.37 E-value=41 Score=35.57 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=26.2
Q ss_pred cCCCCccccchH-HHHHHhhCCcEEEEecc
Q 006746 281 HSRMTGARYPYL-WMRIAQENDWHILIDAC 309 (632)
Q Consensus 281 ~sn~TG~~~pl~-i~~~a~~~g~~vlvDaa 309 (632)
+...-|+.-+++ +++.||++|+.|++|.+
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 455689999999 99999999999999985
No 242
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=21.99 E-value=4.5e+02 Score=24.68 Aligned_cols=80 Identities=9% Similarity=0.030 Sum_probs=51.6
Q ss_pred ccccchhhHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhh
Q 006746 221 YDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQE 299 (632)
Q Consensus 221 ~d~~s~~v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~ 299 (632)
.|.|.--..-+..+.+..|.+|..+..+ +..+++.+.+.+.. ..++.++.-...+.....+. +++..++
T Consensus 102 gd~HdiG~~iv~~~l~~~G~~Vi~LG~~-----vp~e~iv~~~~~~~-----~d~v~l~~S~l~~~~~~~~~~~i~~l~~ 171 (215)
T 3ezx_A 102 GDIHDIGHRLVTTMLGANGFQIVDLGVD-----VLNENVVEEAAKHK-----GEKVLLVGSALMTTSMLGQKDLMDRLNE 171 (215)
T ss_dssp TCCCCHHHHHHHHHHHHTSCEEEECCSS-----CCHHHHHHHHHHTT-----TSCEEEEEECSSHHHHTHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHCCCeEEEcCCC-----CCHHHHHHHHHHcC-----CCEEEEEchhcccCcHHHHHHHHHHHHH
Confidence 3666433334455678899999988664 67789888777643 46777722233444555567 7888777
Q ss_pred CC----cEEEEeccc
Q 006746 300 ND----WHILIDACA 310 (632)
Q Consensus 300 ~g----~~vlvDaaq 310 (632)
.| +.++|=++.
T Consensus 172 ~~~~~~v~v~vGG~~ 186 (215)
T 3ezx_A 172 EKLRDSVKCMFGGAP 186 (215)
T ss_dssp TTCGGGSEEEEESSS
T ss_pred cCCCCCCEEEEECCC
Confidence 64 677776543
No 243
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=21.65 E-value=1.2e+02 Score=31.04 Aligned_cols=62 Identities=13% Similarity=0.165 Sum_probs=38.1
Q ss_pred hHHHHHHHHhcCCEEEEEeccCCccccCHHHHHHHHHhcCcCCCceeEEEEeccCCCCccccchH-HHHHHhhCCcEEEE
Q 006746 228 VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILI 306 (632)
Q Consensus 228 v~~~~~~a~~~G~~v~~v~~~~~~~~i~~~~l~~~i~~~~~~~~~~~Lv~~~~~sn~TG~~~pl~-i~~~a~~~g~~vlv 306 (632)
...|.++.+..|+.++.+|+.|.. +.+... .. .-+..+ .--++ +++.|+++|+.|+|
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~-----------~~~~~~----~g------~~~~~~-l~~ld~vV~~a~~~Gi~vIl 102 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQY-----------LVNNNL----GG------NLDSTS-ISKYDQLVQGCLSLGAYCIV 102 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHH-----------HTTTCT----TC------CCCHHH-HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHH-----------hCCCCC----CC------ccCHHH-HHHHHHHHHHHHHCCCEEEE
Confidence 456677778899999999987532 111000 00 000111 22366 88999999999999
Q ss_pred ecccc
Q 006746 307 DACAL 311 (632)
Q Consensus 307 Daaq~ 311 (632)
|--+.
T Consensus 103 DlH~~ 107 (340)
T 3qr3_A 103 DIHNY 107 (340)
T ss_dssp EECST
T ss_pred EecCC
Confidence 97644
No 244
>4hfl_A Putative cytoplasmic protein; amidase, hydrolase; 2.00A {Enterobacter cloacae} PDB: 4hfk_A
Probab=21.64 E-value=1e+02 Score=28.70 Aligned_cols=42 Identities=21% Similarity=0.359 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCcEEEECCCCC--CCCCcEEEEEEccCC
Q 006746 468 RRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR--FDRGPALAFNVFDWK 518 (632)
Q Consensus 468 ~r~~~L~~~L~~~L~~l~h~~~~G~p~v~Iygp~~~--~~rg~ivaFnv~~~~ 518 (632)
-|+..|++||...| |.|.+.|.+|... ..+-|||.|...+|.
T Consensus 93 ~Rv~~l~~~L~~~l---------Gkpei~itg~~~~~ikgkkGII~f~~~~w~ 136 (176)
T 4hfl_A 93 FRVKDMIAFLPTVL---------GKADISVSSPTPAQFAGKQGIIIFTGHGWL 136 (176)
T ss_dssp CCHHHHHHHHHHHH---------CSCSEEEESCCGGGGTTCCEEEEEEEECSS
T ss_pred EeHHHHHHHHHHhh---------CCCcccccCcCHHHhCCCceEEEEEecCCC
Confidence 46788999997654 6688888887521 246799999987663
Done!