BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006747
(632 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 186/322 (57%), Gaps = 22/322 (6%)
Query: 301 RNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRAS-----AEVLGKGSYGTTYKA 355
R +KP++ F AE++ V G F L +L AS +LG+G +G YK
Sbjct: 1 RRKKPQDHFFD--VPAEEDPEVHL-GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG 57
Query: 356 ILEEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413
L +GT V VKRLKE G+ +F+ ++E++ ++ H N++ +R + + E+LLVY +
Sbjct: 58 RLADGTLVAVKRLKEERXQGGELQFQTEVEMIS-MAVHRNLLRLRGFCMTPTERLLVYPY 116
Query: 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL 473
+ GS ++ L R + PLDW R +I+LGSA+G+A++H K I ++K++N+LL
Sbjct: 117 MANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 175
Query: 474 SQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVIETKKPTQKSDVYSFGVLLLE 528
++ + + DFGL LM+ A G+ APE + T K ++K+DV+ +GV+LLE
Sbjct: 176 DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 235
Query: 529 MLTGKAPIQAP--GHEDVVDLPRWVQSVVREEWTSEVFDVELM-RYENIEEEMVQMLQIA 585
++TG+ ++D V L WV+ +++E+ + DV+L Y++ EE+ Q++Q+A
Sbjct: 236 LITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVA 293
Query: 586 MSCVAKVPDMRPTMEEVVRMIE 607
+ C P RP M EVVRM+E
Sbjct: 294 LLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 166/275 (60%), Gaps = 14/275 (5%)
Query: 343 VLGKGSYGTTYKAILEEGTTVVVKRLKE--VVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
+LG+G +G YK L +G V VKRLKE G+ +F+ ++E++ ++ H N++ +R +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLLRLRGF 95
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+ E+LLVY ++ GS ++ L R + PLDW R +I+LGSA+G+A++H K
Sbjct: 96 CMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVIETKKPTQ 515
I ++K++N+LL ++ + + DFGL LM+ A G+ APE + T K ++
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 516 KSDVYSFGVLLLEMLTGKAPIQAP--GHEDVVDLPRWVQSVVREEWTSEVFDVELM-RYE 572
K+DV+ +GV+LLE++TG+ ++D V L WV+ +++E+ + DV+L Y+
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 274
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+ EE+ Q++Q+A+ C P RP M EVVRM+E
Sbjct: 275 D--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 154/301 (51%), Gaps = 22/301 (7%)
Query: 315 EAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLK-EVVM 373
E+ + LV E + NFD + L+ G G +G YK +L +G V +KR E
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLI-------GHGVFGKVYKGVLRDGAKVALKRRTPESSQ 77
Query: 374 GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP 433
G EFE ++E + +HP++V + + ++E +L+Y ++E G+ L+G+ +
Sbjct: 78 GIEEFETEIETLS-FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMS 135
Query: 434 LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL----TPL 489
+ WE R++I +G+A+G+ ++H I ++KS N+LL ++ I+DFG+ T L
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 490 MNT--PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
T V + GY PE + T+KSDVYSFGV+L E+L ++ I ++V+L
Sbjct: 193 GQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 548 PRWVQSVVREEWTSEVFDVELMRYENIEEEMVQML-QIAMSCVAKVPDMRPTMEEVVRMI 606
W ++ D L + I E ++ A+ C+A + RP+M +V+ +
Sbjct: 253 AEWAVESHNNGQLEQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
Query: 607 E 607
E
Sbjct: 311 E 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 154/301 (51%), Gaps = 22/301 (7%)
Query: 315 EAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLK-EVVM 373
E+ + LV E + NFD + L+ G G +G YK +L +G V +KR E
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLI-------GHGVFGKVYKGVLRDGAKVALKRRTPESSQ 77
Query: 374 GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP 433
G EFE ++E + +HP++V + + ++E +L+Y ++E G+ L+G+ +
Sbjct: 78 GIEEFETEIETLS-FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMS 135
Query: 434 LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL----TPL 489
+ WE R++I +G+A+G+ ++H I ++KS N+LL ++ I+DFG+ T L
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 490 MNT--PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
T V + GY PE + T+KSDVYSFGV+L E+L ++ I ++V+L
Sbjct: 193 DQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 548 PRWVQSVVREEWTSEVFDVELMRYENIEEEMVQML-QIAMSCVAKVPDMRPTMEEVVRMI 606
W ++ D L + I E ++ A+ C+A + RP+M +V+ +
Sbjct: 253 AEWAVESHNNGQLEQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
Query: 607 E 607
E
Sbjct: 311 E 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 154/313 (49%), Gaps = 25/313 (7%)
Query: 313 VQEAEKNKLVFFE--GCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKE 370
V + + F+E + NFD E + +G+G +G YK + TTV VK+L
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAA 64
Query: 371 VV-----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHG 425
+V K++F+Q+++V+ + QH N+V + + D+ LVY ++ GS L
Sbjct: 65 MVDITTEELKQQFDQEIKVMAK-CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 426 NRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG 485
G PL W R KI+ G+A GI +H I +IKS+N+LL + ISDFG
Sbjct: 124 LDGT--PPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFG 178
Query: 486 L---TPLMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
L + + SR G Y APE + + T KSD+YSFGV+LLE++TG P
Sbjct: 179 LARASEKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG-LPAVDE 236
Query: 540 GHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTM 599
E + L + E+ + D ++ ++ E M +A C+ + + RP +
Sbjct: 237 HREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDI 294
Query: 600 EEVVRMIEDIRPS 612
++V ++++++ S
Sbjct: 295 KKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 153/313 (48%), Gaps = 25/313 (7%)
Query: 313 VQEAEKNKLVFFE--GCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKE 370
V + + F+E + NFD E + +G+G +G YK + TTV VK+L
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAA 64
Query: 371 VV-----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHG 425
+V K++F+Q+++V+ + QH N+V + + D+ LVY ++ GS L
Sbjct: 65 MVDITTEELKQQFDQEIKVMAK-CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 426 NRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG 485
G PL W R KI+ G+A GI +H I +IKS+N+LL + ISDFG
Sbjct: 124 LDGT--PPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFG 178
Query: 486 L---TPLMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
L + + R G Y APE + + T KSD+YSFGV+LLE++TG P
Sbjct: 179 LARASEKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG-LPAVDE 236
Query: 540 GHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTM 599
E + L + E+ + D ++ ++ E M +A C+ + + RP +
Sbjct: 237 HREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDI 294
Query: 600 EEVVRMIEDIRPS 612
++V ++++++ S
Sbjct: 295 KKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 153/313 (48%), Gaps = 25/313 (7%)
Query: 313 VQEAEKNKLVFFE--GCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKE 370
V + + F+E + NFD E + +G+G +G YK + TTV VK+L
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAA 58
Query: 371 VV-----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHG 425
+V K++F+Q+++V+ + QH N+V + + D+ LVY ++ GS L
Sbjct: 59 MVDITTEELKQQFDQEIKVMAK-CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 426 NRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG 485
G PL W R KI+ G+A GI +H I +IKS+N+LL + ISDFG
Sbjct: 118 LDGT--PPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFG 172
Query: 486 L---TPLMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
L + + R G Y APE + + T KSD+YSFGV+LLE++TG P
Sbjct: 173 LARASEKFAQXVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG-LPAVDE 230
Query: 540 GHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTM 599
E + L + E+ + D ++ ++ E M +A C+ + + RP +
Sbjct: 231 HREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDI 288
Query: 600 EEVVRMIEDIRPS 612
++V ++++++ S
Sbjct: 289 KKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVV-----MGKREFEQQMEV 384
NFD E + G+G +G YK + TTV VK+L +V K++F+Q+++V
Sbjct: 17 NFD-ERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKV 74
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ QH N+V + + D+ LVY + GS L G PL W R KI+
Sbjct: 75 XAK-CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLSWHXRCKIAQ 131
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
G+A GI +H I +IKS+N+LL + ISDFGL + SR G
Sbjct: 132 GAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 502 ---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTG 532
Y APE + + T KSD+YSFGV+LLE++TG
Sbjct: 189 TTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 12/201 (5%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKR---EFEQQMEVVGRLSQHPNVVPIR 398
E +G GS+GT ++A G+ V VK L E EF +++ ++ RL +HPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFM 100
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+V +++ GS LLH + R LD R+ ++ AKG+ ++H
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG----YRAPEVIETKKPT 514
+ N+KS N+L+ + + DFGL+ L + + S+SA + APEV+ +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 515 QKSDVYSFGVLLLEMLTGKAP 535
+KSDVYSFGV+L E+ T + P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 37/277 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 72
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 73 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 124
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I N++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 125 -NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 229
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
N EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 230 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 263
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 31/272 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG G +G + A + T V VK +K M F + V+ L QH +V + A +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAV-VT 80
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
K+ ++ +F+ GS L + G + PL + S A+G+A I +I
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLP--KLIDFSAQIAEGMAFIEQR---NYIH 134
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSD 518
+++++N+L+S L I+DFGL ++ +R + APE I T KSD
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFG+LL+E++T G+ P PG + P ++++ R + R EN EE
Sbjct: 195 VWSFGILLMEIVTYGRIPY--PGMSN----PEVIRALER--------GYRMPRPENCPEE 240
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ I M C P+ RPT E + +++D
Sbjct: 241 ---LYNIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 31/272 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG G +G + A + T V VK +K M F + V+ L QH +V + A +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAV-VT 253
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
K+ ++ +F+ GS L + G + PL + S A+G+A I +I
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLP--KLIDFSAQIAEGMAFIEQR---NYIH 307
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSD 518
+++++N+L+S L I+DFGL ++ +R + APE I T KSD
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFG+LL+E++T G+ P PG + P ++++ R + R EN EE
Sbjct: 368 VWSFGILLMEIVTYGRIPY--PGMSN----PEVIRALER--------GYRMPRPENCPEE 413
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ I M C P+ RPT E + +++D
Sbjct: 414 ---LYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKR---EFEQQMEVVGRLSQHPNVVPIR 398
E +G GS+GT ++A G+ V VK L E EF +++ ++ RL +HPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFM 100
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+V +++ GS LLH + R LD R+ ++ AKG+ ++H
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG----YRAPEVIETKKPT 514
+ ++KS N+L+ + + DFGL+ L + + S+ A + APEV+ +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 515 QKSDVYSFGVLLLEMLTGKAP 535
+KSDVYSFGV+L E+ T + P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 37/277 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 76
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 128
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 233
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
N EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 234 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 37/277 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 71
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 123
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 124 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 228
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
N EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 229 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 262
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 76
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 128
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 233
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPS 619
N EE+ Q++++ C + P+ RPT + + ++ED ++ + QP
Sbjct: 234 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 278
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 84
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 136
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 137 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 241
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPS 619
N EE+ Q++++ C + P+ RPT + + ++ED ++ + QP
Sbjct: 242 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 286
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 86
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 138
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 139 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 243
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPS 619
N EE+ Q++++ C + P+ RPT + + ++ED ++ + QP
Sbjct: 244 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 288
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 31/274 (11%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 76
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKF 461
+++ ++ +++E GS L GI T + ++ A+G+A I +
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEER---NY 130
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQK 516
I +++++N+L+S L I+DFGL L+ +R + APE I T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575
SDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +N
Sbjct: 191 SDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPDNCP 236
Query: 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 237 EELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 37/277 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 77
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 129
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 130 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 234
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
N EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 235 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 268
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 82
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 134
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 239
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPS 619
N EE+ Q++++ C + P+ RPT + + ++ED ++ + QP
Sbjct: 240 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 284
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 31/274 (11%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 82
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKF 461
+++ ++ +++E GS L GI T + ++ A+G+A I +
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEER---NY 136
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQK 516
I +++++N+L+S L I+DFGL L+ +R + APE I T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575
SDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +N
Sbjct: 197 SDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPDNCP 242
Query: 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 243 EELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 31/274 (11%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 81
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKF 461
+++ ++ +++E GS L GI T + ++ A+G+A I +
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEER---NY 135
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQK 516
I +++++N+L+S L I+DFGL L+ +R + APE I T K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575
SDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +N
Sbjct: 196 SDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPDNCP 241
Query: 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 242 EELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 272
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 31/274 (11%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 78
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKF 461
+++ ++ +++E GS L GI T + ++ A+G+A I +
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEER---NY 132
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQK 516
I +++++N+L+S L I+DFGL L+ +R + APE I T K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575
SDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +N
Sbjct: 193 SDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPDNCP 238
Query: 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 239 EELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 269
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 37/277 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G +G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 85
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 137
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 138 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 242
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
N EE+ Q++++ C + P+ RPT + + ++ED
Sbjct: 243 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 276
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 38/288 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG G G + T V VK LK+ M F + ++ +L QH +V + A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV- 76
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ +++E GS L GI T LD +++ A+G+A I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI------AEGMAFIEER-- 128
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+I +++++N+L+S L I+DFGL L+ +R + APE I
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
T KSDV+SFG+LL E++T G+ P PG + P +Q++ R ++R +
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPY--PGMTN----PEVIQNLER--------GYRMVRPD 233
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPS 619
N EE+ Q++++ C + P+ RPT + + ++ED ++ + QP
Sbjct: 234 NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 278
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 34/279 (12%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG G +G + A + T V VK +K M F + V+ L QH +V + A +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAV-VT 247
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
K+ ++ +F+ GS L + G + PL + S A+G+A I +I
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPL--PKLIDFSAQIAEGMAFIEQR---NYIH 301
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETKKPTQKSDVYSFG 523
+++++N+L+S L I+DFGL + P + + APE I T KSDV+SFG
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARV--GAKFPIK---WTAPEAINFGSFTIKSDVWSFG 356
Query: 524 VLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQML 582
+LL+E++T G+ P PG + P ++++ R + R EN EE +
Sbjct: 357 ILLMEIVTYGRIPY--PGMSN----PEVIRALER--------GYRMPRPENCPEE---LY 399
Query: 583 QIAMSCVAKVPDMRPTMEEVVRMIEDIR---PSDSENQP 618
I M C P+ RPT E + +++D S + QP
Sbjct: 400 NIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQQQP 438
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLK----EVVMGKREFEQQMEVVGRLSQHPNVVPI 397
E++G G +G Y+A G V VK + E + E +Q + + +HPN++ +
Sbjct: 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
R + LV +F G + +L G R ++W ++ A+G+ ++H
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDEA 125
Query: 458 GGKFILGNIKSSNVLLSQDLQGC--------ISDFGLTPLMNTPTVPSRSAGYR--APEV 507
I ++KSSN+L+ Q ++ I+DFGL + T S + Y APEV
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV 185
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQA 538
I ++ SDV+S+GVLL E+LTG+ P +
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
+G G +G + V +K ++E M + +F ++ EV+ +LS HP +V +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 76
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+ LV++F+E G S L RG+ E+ + + L +G+A++ A I
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVIETKKPTQKSD 518
++ + N L+ ++ +SDFG+T + S + + +PEV + + KSD
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFGVL+ E+ + GK P + + +VV E S F + R +
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRLYKPRLAS---- 233
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
+ QI C + P+ RP ++R + +I S
Sbjct: 234 -THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
+G G +G + V +K ++E M + +F ++ EV+ +LS HP +V +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 73
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+ LV++F+E G S L RG+ E+ + + L +G+A++ A I
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVIETKKPTQKSD 518
++ + N L+ ++ +SDFG+T + S + + +PEV + + KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFGVL+ E+ + GK P + + +VV E S F + R +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRLYKPRLAS---- 230
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
+ QI C + P+ RP ++R + +I S
Sbjct: 231 -THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
+G G +G + V +K ++E M + +F ++ EV+ +LS HP +V +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 71
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+ LV++F+E G S L RG+ E+ + + L +G+A++ A I
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVIETKKPTQKSD 518
++ + N L+ ++ +SDFG+T + S + + +PEV + + KSD
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFGVL+ E+ + GK P + + +VV E S F + R +
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRLYKPRLAS---- 228
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
+ QI C + P+ RP ++R + +I S
Sbjct: 229 -THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 344 LGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS--QHPNVVPI 397
+G+GS+G KAIL E+G V+K + M +E E+ V L+ +HPN+V
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGI---GRTPLDWESRVKISLGSAKGIAHIH 454
R + +V D+ E G ++ +G+ LDW ++ ++L H+H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVH 142
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA----GYRAPEVIET 510
K + +IKS N+ L++D + DFG+ ++N+ +R+ Y +PE+ E
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICEN 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV 545
K KSD+++ G +L E+ T K +A +++V
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 33/312 (10%)
Query: 312 GVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEV 371
G QE K + SY +++E + +G GS+GT YK + V VK LK V
Sbjct: 12 GTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKG--KWHGDVAVKILKVV 69
Query: 372 VMGKREFEQ-QMEV-VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGI 429
+F+ + EV V R ++H N++ Y +KD +V + E S LH +
Sbjct: 70 DPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLH----V 124
Query: 430 GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPL 489
T + I+ +A+G+ ++HA I ++KS+N+ L + L I DFGL +
Sbjct: 125 QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181
Query: 490 MNTPT------VPSRSAGYRAPEVIETKKP---TQKSDVYSFGVLLLEMLTGKAPIQAPG 540
+ + P+ S + APEVI + + +SDVYS+G++L E++TG+ P
Sbjct: 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241
Query: 541 HEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTME 600
+ D + +V + S D+ + Y+N + M +++ CV KV + RP
Sbjct: 242 NRDQIIF------MVGRGYASP--DLSKL-YKNCPKAMKRLV---ADCVKKVKEERPLFP 289
Query: 601 EVVRMIEDIRPS 612
+++ IE ++ S
Sbjct: 290 QILSSIELLQHS 301
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
+G G +G + V +K +KE M + +F ++ EV+ +LS HP +V +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLS-HPKLVQLYGVCLE 93
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+ LV++F+E G S L RG+ E+ + + L +G+A++ A I
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVIETKKPTQKSD 518
++ + N L+ ++ +SDFG+T + S + + +PEV + + KSD
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFGVL+ E+ + GK P + + +VV E S F + R +
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRLYKPRLAS---- 250
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
+ QI C + P+ RP ++R + +I S
Sbjct: 251 -THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 30/272 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG G +G + T V VK LK M + F ++ ++ L QH +V + A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRLYAVVTR 79
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
++ ++ +++ GS L + G G+ L + S A+G+A+I +I
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERK---NYIH 133
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSD 518
+++++NVL+S+ L I+DFGL ++ +R + APE I T KSD
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFG+LL E++T GK P + DV+ T+ + R EN +E
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVM--------------TALSQGYRMPRVENCPDE 239
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ ++++ C + + RPT + + +++D
Sbjct: 240 LYDIMKM---CWKEKAEERPTFDYLQSVLDDF 268
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 31/275 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
+G G +G + V +K ++E M + +F ++ EV+ +LS HP +V +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 73
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+ LV++F+E G S L RG+ E+ + + L +G+A++ A I
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEA---SVIH 126
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVIETKKPTQKSD 518
++ + N L+ ++ +SDFG+T + S + + +PEV + + KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFGVL+ E+ + GK P + + +VV E S F + R +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRLYKPRLAS---- 230
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
+ QI C + P+ RP ++R + I S
Sbjct: 231 -THVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
Query: 26 DKQALLDFAANVPHARKLN-WNSSTSVCT-SWVGITCTKNGS--RVLAVRLPGVGLYGPI 81
DKQALL ++ + L+ W +T C +W+G+ C + RV + L G+ L P
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY 66
Query: 82 P-ANTLEKLDSLMILSLRS-NHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQ 137
P ++L L L L + N+L G +P + L+ L +LY+ + N SG IP LS
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 138 LNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRL-RHLNLSYNHL 194
L +D S+N+++G +P SI +L +LVG+ N ++G IP+ + S+L + +S N L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 195 NGSVP 199
G +P
Sbjct: 187 TGKIP 191
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 77 LYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS-SLS 135
L G IP T L+ L + L N L GD S + + ++L N+ + ++ LS
Sbjct: 186 LTGKIPP-TFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS 243
Query: 136 PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLN 195
LN +DL N I G +P + L L LN+S+N+L
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKF----------------------LHSLNVSFNNLC 281
Query: 196 GSVPLA--LQKFPPSSFEGNSMLCGPPLNQCS 225
G +P LQ+F S++ N LCG PL C+
Sbjct: 282 GEIPQGGNLQRFDVSAYANNKCLCGSPLPACT 313
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 31/275 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
+G G +G + V +K ++E M + +F ++ EV+ +LS HP +V +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 74
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+ LV +F+E G S L RG+ E+ + + L +G+A++ A I
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVIETKKPTQKSD 518
++ + N L+ ++ +SDFG+T + S + + +PEV + + KSD
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFGVL+ E+ + GK P + + +VV E S F + R +
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEVV------------EDISTGFRLYKPRLAS---- 231
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
+ QI C + P+ RP ++R + +I S
Sbjct: 232 -THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 30/272 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG G +G + T V VK LK M + F ++ ++ L QH +V + A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRLYAVVTK 78
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
++ ++ +F+ GS L + G G+ L + S A+G+A+I +I
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERK---NYIH 132
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSD 518
+++++NVL+S+ L I+DFGL ++ +R + APE I T KS+
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFG+LL E++T GK P + DV+ S + + + + R EN +E
Sbjct: 193 VWSFGILLYEIVTYGKIPYPGRTNADVM-------SALSQGY-------RMPRMENCPDE 238
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ ++++ C + + RPT + + +++D
Sbjct: 239 LYDIMKM---CWKEKAEERPTFDYLQSVLDDF 267
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 31/276 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG G +G + V VK +KE M + EF Q+ + + +LS HP +V +Y
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS-HPKLV---KFYGV 71
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
++ +Y E S LL+ R G+ L+ +++ +G+A + + +FI
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTP-LMNTPTVPSRSAGY----RAPEVIETKKPTQKSD 518
++ + N L+ +DL +SDFG+T +++ V S + APEV K + KSD
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V++FG+L+ E+ + GK P + +VV + R S+
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDT-------------- 233
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
+ QI SC ++P+ RPT ++++ IE +R D
Sbjct: 234 ---IYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 80
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V +S A G+A++ ++
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYVERM---NYV 133
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 243
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPSS 620
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 244 LMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 249
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 302
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 412
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQP 618
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 413 LMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQXQP 448
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 80
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V +S A G+A++ ++
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYVERM---NYV 133
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 243
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 244 LMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 249
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 302
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 412
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQP 618
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 413 LMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 448
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 32/282 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 332
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
++ +V +++ GS L G G L V ++ A G+A++ ++
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM---NYVH 386
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSD 518
+++++N+L+ ++L ++DFGL L+ +R + APE + T KSD
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 447 VWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHDL 496
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQP 618
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 497 MCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQXQP 531
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 45/299 (15%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG- 386
S ++++ D + +G GS+GT YK V VK L ++ + VG
Sbjct: 4 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGV 61
Query: 387 -RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
R ++H N++ Y +K + +V + E S LH + T + + + I+
Sbjct: 62 LRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQ 116
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---- 501
+A+G+ ++HA I ++KS+N+ L +D I DFGL TV SR +G
Sbjct: 117 TARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA------TVKSRWSGSHQF 167
Query: 502 --------YRAPEVIETKKP---TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRW 550
+ APEVI + + +SDVY+FG++L E++TG+ P + D +
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----- 222
Query: 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
++ V R + ++ V N + M +++ C+ K D RP+ ++ IE++
Sbjct: 223 IEMVGRGSLSPDLSKVR----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 274
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 249
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 302
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 412
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQP 618
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 413 LMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQXQP 448
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 76
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 129
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 239
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPSS 620
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 240 LMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 277
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 144/304 (47%), Gaps = 37/304 (12%)
Query: 317 EKNKLVFFEGCSYNFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVV 372
++NK + G S N+D ++ R + LG G YG Y+ + ++ + TV VK LKE
Sbjct: 199 KRNKPTIY-GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT 257
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
M EF ++ V+ + +HPN+V + + ++ +F+ G+ LL R R
Sbjct: 258 MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ 313
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491
E + L A I+ + K FI N+ + N L+ ++ ++DFGL+ LM
Sbjct: 314 ----EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
Query: 492 TPTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T + + + APE + K + KSDV++FGVLL E+ T G +P PG +
Sbjct: 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----I 423
Query: 546 DLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605
DL + + + + D + R E E++ ++++ +C P RP+ E+ +
Sbjct: 424 DLSQVYELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQA 472
Query: 606 IEDI 609
E +
Sbjct: 473 FETM 476
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 35/299 (11%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRL 388
D+ ++ R S ++ LG G +G + T V +K LK M F ++ +++ +L
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 389 SQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
+H +V + A S++ +V +++ GS L G GR L + V ++ A
Sbjct: 62 -KHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKD--GEGRA-LKLPNLVDMAAQVAA 116
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YR 503
G+A+I +I +++S+N+L+ L I+DFGL L+ +R +
Sbjct: 117 GMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
APE + T KSDV+SFG+LL E++T G+ P + +V+ + V R
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL------EQVERG----- 222
Query: 563 VFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPSS 620
R ++ + + ++ + C K P+ RPT E + +ED ++ + QP
Sbjct: 223 ------YRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPGE 275
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 72
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 125
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 235
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 236 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 273
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 83
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 246
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 247 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 44/277 (15%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
EV+G+G++G KA V +K++ E ++ F ++ + R++ HPN+V + Y
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRVN-HPNIV--KLYG 68
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI---SLGSAKGIAHIHAAVG 458
+ LV ++ E GS +LHG PL + + L ++G+A++H+
Sbjct: 69 ACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 459 GKFILGNIKSSNVLLSQD---LQGCISDFGLTPLMNTPTVPSR-SAGYRAPEVIETKKPT 514
I ++K N+LL L+ C DFG + T ++ SA + APEV E +
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKIC--DFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K DV+S+G++L E++T + P G F + +
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEIG--------------------GPAFRIMWAVHNGT 221
Query: 575 EEEMVQML-----QIAMSCVAKVPDMRPTMEEVVRMI 606
+++ L + C +K P RP+MEE+V+++
Sbjct: 222 RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 74
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 127
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 237
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 238 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 275
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 83
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 246
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 247 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 45/313 (14%)
Query: 312 GVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEV 371
G ++ + K + S ++++ D + +G GS+GT YK + V VK L
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVT 69
Query: 372 VMGKREFEQQMEVVG--RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGI 429
++ + VG R ++H N++ Y +K + +V + E S LH I
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----I 124
Query: 430 GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPL 489
T + + I+ +A+G+ ++HA I ++KS+N+ L +DL I DFGL
Sbjct: 125 IETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 179
Query: 490 MNTPTVPSRSAG------------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKA 534
TV SR +G + APEVI + K P +SDVY+FG++L E++TG+
Sbjct: 180 ----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
Query: 535 PIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPD 594
P + D + + V R + ++ V N + M +++ C+ K D
Sbjct: 236 PYSNINNRDQI-----IFMVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRD 283
Query: 595 MRPTMEEVVRMIE 607
RP +++ IE
Sbjct: 284 ERPLFPQILASIE 296
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 44/280 (15%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
EV+G+G++G KA V +K++ E ++ F ++ + R++ HPN+V + Y
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRVN-HPNIV--KLYG 69
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI---SLGSAKGIAHIHAAVG 458
+ LV ++ E GS +LHG PL + + L ++G+A++H+
Sbjct: 70 ACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 459 GKFILGNIKSSNVLLSQD---LQGCISDFGLTPLMNTPTVPSR-SAGYRAPEVIETKKPT 514
I ++K N+LL L+ C DFG + T ++ SA + APEV E +
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKIC--DFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K DV+S+G++L E++T + P G F + +
Sbjct: 183 EKCDVFSWGIILWEVITRRKPFDEIG--------------------GPAFRIMWAVHNGT 222
Query: 575 EEEMVQML-----QIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+++ L + C +K P RP+MEE+V+++ +
Sbjct: 223 RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 83
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 246
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPSS 620
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 247 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 83
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 246
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 247 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 73
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 126
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 236
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQPSS 620
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 237 LMCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 274
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 145/303 (47%), Gaps = 35/303 (11%)
Query: 317 EKNKLVFFEGCSYNFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVV 372
++NK + G S N+D ++ R + LG G YG Y+ + ++ + TV VK LKE
Sbjct: 238 KRNKPTVY-GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT 296
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
M EF ++ V+ + +HPN+V + + ++ +F+ G+ LL R R
Sbjct: 297 MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ 352
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492
++ + ++ + + ++ FI N+ + N L+ ++ ++DFGL+ LM
Sbjct: 353 EVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 409
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
T + + + APE + K + KSDV++FGVLL E+ T G +P PG +D
Sbjct: 410 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----ID 463
Query: 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
L + + + + D + R E E++ ++++ +C P RP+ E+ +
Sbjct: 464 LSQVYELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAF 512
Query: 607 EDI 609
E +
Sbjct: 513 ETM 515
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 144/304 (47%), Gaps = 37/304 (12%)
Query: 317 EKNKLVFFEGCSYNFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVV 372
++NK + G S N+D ++ R + LG G YG Y+ + ++ + TV VK LKE
Sbjct: 196 KRNKPTVY-GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT 254
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
M EF ++ V+ + +HPN+V + + ++ +F+ G+ LL R R
Sbjct: 255 MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ 310
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491
E + L A I+ + K FI N+ + N L+ ++ ++DFGL+ LM
Sbjct: 311 ----EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 366
Query: 492 TPTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T + + + APE + K + KSDV++FGVLL E+ T G +P PG +
Sbjct: 367 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----I 420
Query: 546 DLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605
DL + + + + D + R E E++ ++++ +C P RP+ E+ +
Sbjct: 421 DLSQVYELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQA 469
Query: 606 IEDI 609
E +
Sbjct: 470 FETM 473
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 32/282 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 250
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
++ +V +++ GS L G G L V ++ A G+A++ ++
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM---NYVH 304
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSD 518
+++++N+L+ ++L ++DFGL L+ +R + APE + T KSD
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 365 VWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHDL 414
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIED-IRPSDSENQP 618
M Q C K P+ RPT E + +ED ++ + QP
Sbjct: 415 MCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQXQP 449
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 83
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ G L G G R P V ++ A G+A++ ++
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 246
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 247 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 45/297 (15%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG- 386
S ++++ D + +G GS+GT YK + V VK L ++ + VG
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 387 -RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
R ++H N++ Y +K + +V + E S LH I T + + I+
Sbjct: 63 LRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQ 117
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---- 501
+A+G+ ++HA I ++KS+N+ L +DL I DFGL TV SR +G
Sbjct: 118 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQF 168
Query: 502 --------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRW 550
+ APEVI + K P +SDVY+FG++L E++TG+ P + D +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----- 223
Query: 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+ V R + ++ V N + M +++ C+ K D RP +++ IE
Sbjct: 224 IFMVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 273
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 45/297 (15%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG- 386
S ++++ D + +G GS+GT YK + V VK L ++ + VG
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 387 -RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
R ++H N++ Y +K + +V + E S LH I T + + I+
Sbjct: 63 LRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQ 117
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---- 501
+A+G+ ++HA I ++KS+N+ L +DL I DFGL TV SR +G
Sbjct: 118 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQF 168
Query: 502 --------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRW 550
+ APEVI + K P +SDVY+FG++L E++TG+ P + D +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----- 223
Query: 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+ V R + ++ V N + M +++ C+ K D RP +++ IE
Sbjct: 224 IFMVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 273
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 45/297 (15%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG- 386
S ++++ D + +G GS+GT YK + V VK L ++ + VG
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 59
Query: 387 -RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
R ++H N++ Y +K + +V + E S LH I T + + I+
Sbjct: 60 LRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQ 114
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---- 501
+A+G+ ++HA I ++KS+N+ L +DL I DFGL TV SR +G
Sbjct: 115 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQF 165
Query: 502 --------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRW 550
+ APEVI + K P +SDVY+FG++L E++TG+ P + D +
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----- 220
Query: 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+ V R + ++ V N + M +++ C+ K D RP +++ IE
Sbjct: 221 IFMVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 270
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 32/284 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ ++ +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI-RHEKLVQLYAV-VS 83
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
++ +V +++ GS L G G L V ++ A G+A++ ++
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSD 518
+++++N+L+ ++L ++DFGL L+ +R + APE + T KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
V+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHDL 247
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 248 MCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 45/295 (15%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG--R 387
++++ D + +G GS+GT YK + V VK L ++ + VG R
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
++H N++ Y +K + +V + E S LH I T + + I+ +A
Sbjct: 60 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTA 114
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------ 501
+G+ ++HA I ++KS+N+ L +DL I DFGL TV SR +G
Sbjct: 115 QGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQFEQ 165
Query: 502 ------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQ 552
+ APEVI + K P +SDVY+FG++L E++TG+ P + D + +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IF 220
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
V R + ++ V N + M +++ C+ K D RP +++ IE
Sbjct: 221 MVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 83
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ GS L G G R P V ++ A G+A++ ++
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
++ ++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 246
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 247 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 45/297 (15%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG- 386
S ++++ D + +G GS+GT YK + V VK L ++ + VG
Sbjct: 27 SDDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 84
Query: 387 -RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
R ++H N++ Y +K + +V + E S LH I T + + I+
Sbjct: 85 LRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQ 139
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---- 501
+A+G+ ++HA I ++KS+N+ L +DL I DFGL TV SR +G
Sbjct: 140 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQF 190
Query: 502 --------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRW 550
+ APEVI + K P +SDVY+FG++L E++TG+ P + D +
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----- 245
Query: 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+ V R + ++ V N + M +++ C+ K D RP +++ IE
Sbjct: 246 IFMVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 295
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG+G +G + T V +K LK M F Q+ +V+ +L +H +V + A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV-VS 83
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
++ +V +++ G L G G R P V ++ A G+A++ ++
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQKS 517
+++++N+L+ ++L ++DFGL L+ +R + APE + T KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 518 DVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576
DV+SFG+LL E+ T G+ P + +V+D V+ R E E++ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERGYRMPCPPEC-------PESLHD 246
Query: 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS-DSENQPSS 620
M Q C K P+ RPT E + +ED S + + QP
Sbjct: 247 LMCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 136/299 (45%), Gaps = 45/299 (15%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG- 386
S ++++ D + +G GS+GT YK V VK L ++ + VG
Sbjct: 16 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 387 -RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
R ++H N++ Y +K + +V + E S LH + T + + + I+
Sbjct: 74 LRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQ 128
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---- 501
+A+G+ ++HA I ++KS+N+ L +D I DFGL T SR +G
Sbjct: 129 TARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA------TEKSRWSGSHQF 179
Query: 502 --------YRAPEVIETKKP---TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRW 550
+ APEVI + + +SDVY+FG++L E++TG+ P + D +
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----- 234
Query: 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
++ V R + ++ V N + M +++ C+ K D RP+ ++ IE++
Sbjct: 235 IEMVGRGSLSPDLSKVR----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 286
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 37/299 (12%)
Query: 322 VFFEGCSYNFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKRE 377
++F+G S N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M E
Sbjct: 10 LYFQG-SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 68
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWE 437
F ++ V+ + +HPN+V + + ++ +F+ G+ LL R R E
Sbjct: 69 FLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----E 120
Query: 438 SRVKISLGSAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP 496
+ L A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T
Sbjct: 121 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180
Query: 497 SRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRW 550
+ + + APE + K + KSDV++FGVLL E+ T G +P PG +DL +
Sbjct: 181 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQV 234
Query: 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ + + D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 235 YELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 282
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 141/313 (45%), Gaps = 45/313 (14%)
Query: 312 GVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEV 371
G ++ + K + S ++++ D + +G GS+GT YK + V VK L
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVT 69
Query: 372 VMGKREFEQQMEVVG--RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGI 429
++ + VG R ++H N++ Y +K + +V + E S LH I
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----I 124
Query: 430 GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPL 489
T + + I+ +A+G+ ++HA I ++KS+N+ L +DL I DFGL
Sbjct: 125 IETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 179
Query: 490 MNTPTVPSRSAG------------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKA 534
T SR +G + APEVI + K P +SDVY+FG++L E++TG+
Sbjct: 180 ----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
Query: 535 PIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPD 594
P + D + + V R + ++ V N + M +++ C+ K D
Sbjct: 236 PYSNINNRDQI-----IFMVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRD 283
Query: 595 MRPTMEEVVRMIE 607
RP +++ IE
Sbjct: 284 ERPLFPQILASIE 296
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 19/216 (8%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPIRA 399
E +G+G+YG YKA +G V +KR++ + + + L + HPN+V +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHIHAAVG 458
S+ LV++F+E L G+ +S++KI L +G+AH H
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKIYLYQLLRGVAHCHQH-- 138
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIE-TKKP 513
+ + ++K N+L++ D ++DFGL P T + YRAP+V+ +KK
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 514 TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPR 549
+ D++S G + EM+TGK P+ PG D LP+
Sbjct: 198 STSVDIWSIGCIFAEMITGK-PL-FPGVTDDDQLPK 231
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 19/216 (8%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPIRA 399
E +G+G+YG YKA +G V +KR++ + + + L + HPN+V +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHIHAAVG 458
S+ LV++F+E L G+ +S++KI L +G+AH H
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKIYLYQLLRGVAHCHQH-- 138
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIE-TKKP 513
+ + ++K N+L++ D ++DFGL P T + YRAP+V+ +KK
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 514 TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPR 549
+ D++S G + EM+TGK P+ PG D LP+
Sbjct: 198 STSVDIWSIGCIFAEMITGK-PL-FPGVTDDDQLPK 231
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG--R 387
++++ D + +G GS+GT YK + V VK L ++ + VG R
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
++H N++ Y + + +V + E S LH I T + + I+ +A
Sbjct: 60 KTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTA 114
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------ 501
+G+ ++HA I ++KS+N+ L +DL I DFGL TV SR +G
Sbjct: 115 QGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQFEQ 165
Query: 502 ------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQ 552
+ APEVI + K P +SDVY+FG++L E++TG+ P + D + +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IF 220
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
V R + ++ V N + M +++ C+ K D RP +++ IE
Sbjct: 221 MVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 36/295 (12%)
Query: 326 GCSYNFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQ 381
G S N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 382 MEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVK 441
V+ + +HPN+V + + ++ +F+ G+ LL R R E
Sbjct: 61 AAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAV 112
Query: 442 ISLGSAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSR 498
+ L A I+ + K FI ++ + N L+ ++ ++DFGL+ LM +T T P+
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172
Query: 499 SA---GYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSV 554
+ + APE + K + KSDV++FGVLL E+ T G +P PG +DL + + +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELL 226
Query: 555 VREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 227 EK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG- 386
S ++++ D + +G GS+GT YK + V VK L ++ + VG
Sbjct: 20 SDDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 77
Query: 387 -RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
R ++H N++ Y +K + +V + E S LH I T + + I+
Sbjct: 78 LRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQ 132
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---- 501
+A+G+ ++HA I ++KS+N+ L +DL I DFGL T SR +G
Sbjct: 133 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQF 183
Query: 502 --------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRW 550
+ APEVI + K P +SDVY+FG++L E++TG+ P + D +
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----- 238
Query: 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+ V R + ++ V N + M +++ C+ K D RP +++ IE
Sbjct: 239 IFMVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 288
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM----GKREFEQQMEVVGRLSQHPNVVP 396
EVLGKG +G K E V+V +KE++ +R F ++++V+ R +HPNV+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMV--MKELIRFDEETQRTFLKEVKVM-RCLEHPNVLK 71
Query: 397 IRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ KD++L + ++I+ G+ ++ + W RV + A G+A++H+
Sbjct: 72 FIGVLY-KDKRLNFITEYIKGGTLRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHS 126
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----------NTPTVPSRSAGYR-- 503
I ++ S N L+ ++ ++DFGL LM + P R Y
Sbjct: 127 M---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 504 ------APEVIETKKPTQKSDVYSFGVLLLEML 530
APE+I + +K DV+SFG++L E++
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG--R 387
++++ D + +G GS+GT YK + V VK L ++ + VG R
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
++H N++ Y +K + +V + E S LH I T + + I+ +A
Sbjct: 60 KTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTA 114
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------ 501
+G+ ++HA I ++KS+N+ L +DL I DFGL T SR +G
Sbjct: 115 QGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQFEQ 165
Query: 502 ------YRAPEVI--ETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQ 552
+ APEVI + K P +SDVY+FG++L E++TG+ P + D + +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IF 220
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
V R + ++ V N + M +++ C+ K D RP +++ IE
Sbjct: 221 MVGRGYLSPDLSKVR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 63 NGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQ 122
N S ++++ L L G IP+ +L L L L L N L G++P ++ + +L L L
Sbjct: 413 NCSELVSLHLSFNYLSGTIPS-SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 123 NNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-- 178
N+ +G IPS LS LNW+ LS N +TG IP I L +L L L NNS +G IP
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 179 FNLSRLRHLNLSYNHLNGSVPLALQK 204
+ L L+L+ N NG++P A+ K
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIPAAMFK 557
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 77 LYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSP 136
+YG + T + S+M L + N LSG +P + S+ L L L +N+ SG+IP +
Sbjct: 616 VYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD 675
Query: 137 --QLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHL 194
LN +DLS N + G IP ++ L+ L ++L NN+L+G IP
Sbjct: 676 LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMG-------------- 721
Query: 195 NGSVPLALQKFPPSSFEGNSMLCGPPLNQC 224
+ FPP+ F N LCG PL +C
Sbjct: 722 ------QFETFPPAKFLNNPGLCGYPLPRC 745
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
Query: 76 GLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS 135
G G IP TL L+ L L N+LSG +PS++ SLS LR L L N G IP L
Sbjct: 402 GFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 460
Query: 136 --PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSY 191
L + L FN +TG IP+ + N ++L ++L NN LTG IP + L L L LS
Sbjct: 461 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 520
Query: 192 NHLNGSVPLAL 202
N +G++P L
Sbjct: 521 NSFSGNIPAEL 531
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 77 LYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSP 136
L G IP+ L +L +SL +N L+G++P + L +L L L NN+FSGNIP+ L
Sbjct: 475 LTGEIPSG-LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD 533
Query: 137 --QLNWVDLSFNSITGNIPASIRNLSHLVGLNL 167
L W+DL+ N G IPA++ S + N
Sbjct: 534 CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 566
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 71/156 (45%), Gaps = 32/156 (20%)
Query: 79 GPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQ- 137
G IP D+L L L NH G +P S S L L L +NNFSG +P +
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 138 --LNWVDLSFNSITGNIPASIRNLSH---------------------------LVGLNLQ 168
L +DLSFN +G +P S+ NLS L L LQ
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 399
Query: 169 NNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLAL 202
NN TG IP N S L L+LS+N+L+G++P +L
Sbjct: 400 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 95 LSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS-SLSPQLNWVDLSFNSITGNIP 153
L++ N +SGD+ +V +L FL + +NNFS IP L +D+S N ++G+
Sbjct: 180 LAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 237
Query: 154 ASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVP 199
+I + L LN+ +N G IP L L++L+L+ N G +P
Sbjct: 238 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIP 283
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 28/151 (18%)
Query: 86 LEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLSF 145
L +L L + N LSGD + + + L+ L + +N F G IP L ++ L+
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 275
Query: 146 NSITGNIPASIRN-LSHLVGLNLQNNSLTGFIPNF------------------------- 179
N TG IP + L GL+L N G +P F
Sbjct: 276 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 335
Query: 180 --NLSRLRHLNLSYNHLNGSVPLALQKFPPS 208
+ L+ L+LS+N +G +P +L S
Sbjct: 336 LLKMRGLKVLDLSFNEFSGELPESLTNLSAS 366
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 47 SSTSVCTSWVGITCTKNGSRVLAVRLPGVGLYGPIPA-NTLEKLDSLMILSLRSNHLSGD 105
S++ + S G C+ + + ++ L L GP+ +L L L++ SN L D
Sbjct: 82 SNSHINGSVSGFKCS---ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--D 136
Query: 106 LPSNV---LSLSSLRFLYLQNNNFSGN-----IPSSLSPQLNWVDLSFNSITGNIPASIR 157
P V L L+SL L L N+ SG + S +L + +S N I+G++ +
Sbjct: 137 FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVS 194
Query: 158 NLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLAL 202
+L L++ +N+ + IP + S L+HL++S N L+G A+
Sbjct: 195 RCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAI 240
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 63 NGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQ 122
N S ++++ L L G IP+ +L L L L L N L G++P ++ + +L L L
Sbjct: 416 NCSELVSLHLSFNYLSGTIPS-SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 123 NNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-- 178
N+ +G IPS LS LNW+ LS N +TG IP I L +L L L NNS +G IP
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 179 FNLSRLRHLNLSYNHLNGSVPLALQK 204
+ L L+L+ N NG++P A+ K
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFK 560
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 77 LYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSP 136
+YG + T + S+M L + N LSG +P + S+ L L L +N+ SG+IP +
Sbjct: 619 VYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD 678
Query: 137 --QLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHL 194
LN +DLS N + G IP ++ L+ L ++L NN+L+G IP
Sbjct: 679 LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMG-------------- 724
Query: 195 NGSVPLALQKFPPSSFEGNSMLCGPPLNQC 224
+ FPP+ F N LCG PL +C
Sbjct: 725 ------QFETFPPAKFLNNPGLCGYPLPRC 748
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
Query: 76 GLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS 135
G G IP TL L+ L L N+LSG +PS++ SLS LR L L N G IP L
Sbjct: 405 GFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463
Query: 136 --PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSY 191
L + L FN +TG IP+ + N ++L ++L NN LTG IP + L L L LS
Sbjct: 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 523
Query: 192 NHLNGSVPLAL 202
N +G++P L
Sbjct: 524 NSFSGNIPAEL 534
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 77 LYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSP 136
L G IP+ L +L +SL +N L+G++P + L +L L L NN+FSGNIP+ L
Sbjct: 478 LTGEIPSG-LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD 536
Query: 137 --QLNWVDLSFNSITGNIPASIRNLSHLVGLNL 167
L W+DL+ N G IPA++ S + N
Sbjct: 537 CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 71/156 (45%), Gaps = 32/156 (20%)
Query: 79 GPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQ- 137
G IP D+L L L NH G +P S S L L L +NNFSG +P +
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 138 --LNWVDLSFNSITGNIPASIRNLSH---------------------------LVGLNLQ 168
L +DLSFN +G +P S+ NLS L L LQ
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402
Query: 169 NNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLAL 202
NN TG IP N S L L+LS+N+L+G++P +L
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 95 LSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS-SLSPQLNWVDLSFNSITGNIP 153
L++ N +SGD+ +V +L FL + +NNFS IP L +D+S N ++G+
Sbjct: 183 LAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 240
Query: 154 ASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVP 199
+I + L LN+ +N G IP L L++L+L+ N G +P
Sbjct: 241 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIP 286
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 28/151 (18%)
Query: 86 LEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLSF 145
L +L L + N LSGD + + + L+ L + +N F G IP L ++ L+
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 278
Query: 146 NSITGNIPASIRN-LSHLVGLNLQNNSLTGFIPNF------------------------- 179
N TG IP + L GL+L N G +P F
Sbjct: 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 338
Query: 180 --NLSRLRHLNLSYNHLNGSVPLALQKFPPS 208
+ L+ L+LS+N +G +P +L S
Sbjct: 339 LLKMRGLKVLDLSFNEFSGELPESLTNLSAS 369
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 47 SSTSVCTSWVGITCTKNGSRVLAVRLPGVGLYGPIPANT-LEKLDSLMILSLRSNHLSGD 105
S++ + S G C+ + + ++ L L GP+ T L L L++ SN L D
Sbjct: 85 SNSHINGSVSGFKCS---ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--D 139
Query: 106 LPSNV---LSLSSLRFLYLQNNNFSGN-----IPSSLSPQLNWVDLSFNSITGNIPASIR 157
P V L L+SL L L N+ SG + S +L + +S N I+G++ +
Sbjct: 140 FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVS 197
Query: 158 NLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQ 203
+L L++ +N+ + IP + S L+HL++S N L+G A+
Sbjct: 198 RCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAIS 244
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 36/295 (12%)
Query: 326 GCSYNFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQ 381
G S N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++
Sbjct: 1 GPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 382 MEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVK 441
V+ + +HPN+V + + ++ +F+ G+ LL R R E
Sbjct: 61 AAVMKEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGN---LLDYLRECNRQ----EVNAV 112
Query: 442 ISLGSAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA 500
+ L A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
Query: 501 G-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSV 554
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELL 226
Query: 555 VREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 227 EK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 120
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 232
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 120
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 232
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 68 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 119
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 231
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 232 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
E +G+G+ GT Y A+ + G V ++++ K+E +V R +++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
Y DE +V +++ GS + + + T +D + + + +H+ +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDV------VTETCMDEGQIAAVCRECLQALEFLHS---NQ 137
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQ 515
I NIKS N+LL D ++DFG + TP RS + APEV+ K
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 516 KSDVYSFGVLLLEMLTGKAP 535
K D++S G++ +EM+ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 120
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 232
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 115
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 227
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 115
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 227
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 45/297 (15%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG--R 387
++++ D + +G GS+GT YK V VK L ++ + VG R
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
++H N++ Y + + +V + E S LH + T + + + I+ +A
Sbjct: 76 KTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTA 130
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------ 501
+G+ ++HA I ++KS+N+ L +D I DFGL T SR +G
Sbjct: 131 RGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA------TEKSRWSGSHQFEQ 181
Query: 502 ------YRAPEVIETKKP---TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQ 552
+ APEVI + + +SDVY+FG++L E++TG+ P + D + ++
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IE 236
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
V R + ++ V N + M +++ C+ K D RP+ ++ IE++
Sbjct: 237 MVGRGSLSPDLSKVR----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 286
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGN---LLDYLRECNRQ----EVSAVVLLY 115
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 227
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 120
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 232
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 140/291 (48%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 117
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSA-- 500
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM +T T P+ +
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 501 -GYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 229
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 230 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVSAVVLLY 120
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 232
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 117
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 229
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 230 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVSAVVLLY 115
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 227
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 24/212 (11%)
Query: 342 EVLGKGSYGTTYKA-ILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
E++G G+YG YK ++ G +K + + E +Q++ ++ + S H N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 401 YFSK------DEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ K D+ LV +F AGS + L+ +G L E I +G++H+H
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLH 146
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVI- 508
K I +IK NVLL+++ + + DFG++ ++ TV R+ + APEVI
Sbjct: 147 QH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-TVGRRNTFIGTPYWMAPEVIA 202
Query: 509 --ETKKPTQ--KSDVYSFGVLLLEMLTGKAPI 536
E T KSD++S G+ +EM G P+
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVNAVVLLY 117
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 229
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 230 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS G A + G V VK++ +RE V+ R QH NVV + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
DE +V +F+E G+ + + + T ++ E + L + ++ +HA I
Sbjct: 92 VGDELWVVMEFLEGGALTDI------VTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 142
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVIETKKPTQKS 517
+IKS ++LL+ D + +SDFG ++ VP R + + APE+I +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G++++EM+ G+ P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGN---LLDYLRECNRQ----EVSAVVLLY 115
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 227
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 330 NFDLEDLLRASAEV---LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVV 385
N+D ++ R + LG G YG Y+ + ++ + TV VK LKE M EF ++ V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
+ +HPN+V + + ++ +F+ G+ LL R R E + L
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGN---LLDYLRECNRQ----EVSAVVLLY 115
Query: 446 SAKGIAHIHAAVGGK-FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
A I+ + K FI ++ + N L+ ++ ++DFGL+ LM T + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 502 --YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
+ APE + K + KSDV++FGVLL E+ T G +P PG +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PG----IDLSQVYELLEK-- 227
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
D + R E E++ ++++ +C P RP+ E+ + E +
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS G A + G V VK++ +RE V+ R QH NVV + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
DE +V +F+E G+ + + + T ++ E + L + ++ +HA I
Sbjct: 88 VGDELWVVMEFLEGGALTDI------VTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 138
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVIETKKPTQKS 517
+IKS ++LL+ D + +SDFG ++ VP R + + APE+I +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G++++EM+ G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS G A + G V VK++ +RE V+ R QH NVV + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
DE +V +F+E G+ + + + T ++ E + L + ++ +HA I
Sbjct: 97 VGDELWVVMEFLEGGALTDI------VTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 147
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVIETKKPTQKS 517
+IKS ++LL+ D + +SDFG ++ VP R + + APE+I +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G++++EM+ G+ P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS G A + G V VK++ +RE V+ R QH NVV + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
DE +V +F+E G+ + ++ R ++ E + L + ++ +HA I
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ---GVI 149
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVIETKKPTQKS 517
+IKS ++LL+ D + +SDFG ++ VP R + + APE+I +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G++++EM+ G+ P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 26/222 (11%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ V +K LK K R+F + ++G+ HPNV+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNVI 97
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH-IH 454
+ +++ +F+E GS + L N G + V +G +GIA +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIAAGMK 149
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSRSAG-----YRAP 505
++ ++ + N+L++ +L +SDFGL+ + + PT S G + AP
Sbjct: 150 YLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
E I+ +K T SDV+S+G+++ E+++ G+ P ++DV++
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 251
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 329 YNFDLEDLLRASAEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGK--REFEQQMEVV 385
++F EDL + E+ G+G+YG+ K + + G + VKR++ V K ++ ++VV
Sbjct: 17 WDFTAEDL-KDLGEI-GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
R S P +V F + + + + + + SF + + E KI+L
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---Y 502
+ K + H+ + K I +IK SN+LL + + DFG++ + +R AG Y
Sbjct: 134 TVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPY 191
Query: 503 RAPEVIETKKPTQ----KSDVYSFGVLLLEMLTGKAP 535
APE I+ Q +SDV+S G+ L E+ TG+ P
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
E +G+G+ GT Y A+ + G V ++++ K+E +V R +++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
Y DE +V +++ GS + + + T +D + + + +H+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDV------VTETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQ 515
I +IKS N+LL D ++DFG + TP RS + APEV+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 516 KSDVYSFGVLLLEMLTGKAP 535
K D++S G++ +EM+ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS G A + G V VK++ +RE V+ R QH NVV + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
DE +V +F+E G+ + ++ R ++ E + L + ++ +HA I
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ---GVI 192
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVIETKKPTQKS 517
+IKS ++LL+ D + +SDFG ++ VP R + + APE+I +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G++++EM+ G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS G A + G V VK++ +RE V+ R H NVV + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
DE +V +F+E G+ + + + T ++ E + L + ++++H I
Sbjct: 113 VGDELWVVMEFLEGGALTDI------VTHTRMNEEQIATVCLSVLRALSYLH---NQGVI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVIETKKPTQKS 517
+IKS ++LL+ D + +SDFG ++ VP R + + APEVI +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G++++EM+ G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
E +G+G+ GT Y A+ + G V ++++ K+E +V R +++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
Y DE +V +++ GS + + + T +D + + + +H+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDV------VTETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQ 515
I +IKS N+LL D ++DFG + TP RS + APEV+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 516 KSDVYSFGVLLLEMLTGKAP 535
K D++S G++ +EM+ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
E +G+G+ GT Y A+ + G V ++++ K+E +V R +++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
Y DE +V +++ GS + + + T +D + + + +H+ +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDV------VTETCMDEGQIAAVCRECLQALEFLHS---NQ 137
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQ 515
I +IKS N+LL D ++DFG + TP RS + APEV+ K
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 516 KSDVYSFGVLLLEMLTGKAP 535
K D++S G++ +EM+ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
E +G+G+ GT Y A+ + G V ++++ K+E +V R +++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
Y DE +V +++ GS + + + T +D + + + +H+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDV------VTETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQ 515
I +IKS N+LL D ++DFG + TP RS + APEV+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 516 KSDVYSFGVLLLEMLTGKAP 535
K D++S G++ +EM+ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 344 LGKGSYGTTYKA-ILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS G A + G V VK++ +RE V+ R QH NVV + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
DE +V +F+E G+ + ++ R ++ E + L + ++ +HA I
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ---GVI 269
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVIETKKPTQKS 517
+IKS ++LL+ D + +SDFG ++ VP R + + APE+I +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G++++EM+ G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 111/222 (50%), Gaps = 26/222 (11%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLK--EVVMGKREFEQQMEVVGRLSQHPNVV 395
EV+G G +G + L+ + + V +K LK +REF + ++G+ +HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 78
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH-IH 454
+ + +++ +F+E G+ + L N G + V +G +GIA +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--------QFTVIQLVGMLRGIASGMR 130
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSRSAG-----YRAP 505
++ ++ + N+L++ +L +SDFGL+ + + PT S G + AP
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
E I +K T SD +S+G+++ E+++ G+ P ++DV++
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN 232
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 33/274 (12%)
Query: 344 LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
LG G YG Y+ + ++ + TV VK LKE M EF ++ V+ + +HPN+V +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 77
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK-F 461
+ ++ +F+ G+ LL R R E + L A I+ + K F
Sbjct: 78 REPPFYIIIEFMTYGN---LLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQK 516
I ++ + N L+ ++ ++DFGL+ LM T + + + APE + K + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575
SDV++FGVLL E+ T G +P PG +D P V ++ + D + R E
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--PG----ID-PSQVYELLEK-------DYRMERPEGCP 236
Query: 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E++ ++++ +C P RP+ E+ + E +
Sbjct: 237 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E LG+GSYG+ YKAI +E +V + V +E +++ ++ + P+VV Y
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS-PHVVKYYGSY 93
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKF 461
F + +V ++ AGS S ++ + L + I + KG+ ++H +
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIR----LRNKTLTEDEIATILQSTLKGLEYLHFM---RK 146
Query: 462 ILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQKS 517
I +IK+ N+LL+ + ++DFG LT M + + APEVI+ +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G+ +EM GK P
Sbjct: 207 DIWSLGITAIEMAEGKPP 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 26/222 (11%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ V +K LK K R+F + ++G+ HPNV+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNVI 71
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH-IH 454
+ +++ +F+E GS + L N G + V +G +GIA +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIAAGMK 123
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSRSAG-----YRAP 505
++ + + N+L++ +L +SDFGL+ + + PT S G + AP
Sbjct: 124 YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
E I+ +K T SDV+S+G+++ E+++ G+ P ++DV++
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 225
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 33/274 (12%)
Query: 344 LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
LG G YG Y+ + ++ + TV VK LKE M EF ++ V+ + +HPN+V +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 77
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK-F 461
+ ++ +F+ G+ LL R R E + L A I+ + K F
Sbjct: 78 REPPFYIITEFMTYGN---LLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQK 516
I ++ + N L+ ++ ++DFGL+ LM T + + + APE + K + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575
SDV++FGVLL E+ T G +P PG +D P V ++ + D + R E
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--PG----ID-PSQVYELLEK-------DYRMERPEGCP 236
Query: 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E++ ++++ +C P RP+ E+ + E +
Sbjct: 237 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 111/222 (50%), Gaps = 26/222 (11%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLK--EVVMGKREFEQQMEVVGRLSQHPNVV 395
EV+G G +G + L+ + + V +K LK +REF + ++G+ +HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 80
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH-IH 454
+ + +++ +F+E G+ + L N G + V +G +GIA +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--------QFTVIQLVGMLRGIASGMR 132
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSRSAG-----YRAP 505
++ ++ + N+L++ +L +SDFGL+ + + PT S G + AP
Sbjct: 133 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
E I +K T SD +S+G+++ E+++ G+ P ++DV++
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN 234
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+ +GKG +G G V VK +K + F + V+ +L +H N+V +
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ-AFLAEASVMTQL-RHSNLVQLLGVI 68
Query: 402 FSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+ L +V +++ GS L R GR+ L + +K SL + + ++ G
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNN 122
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTP----LMNTPTVPSRSAGYRAPEVIETKKPTQK 516
F+ ++ + NVL+S+D +SDFGLT +T +P + + APE + KK + K
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK---WTAPEALREKKFSTK 179
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPR 549
SDV+SFG+LL E+ + G+ P +DVV PR
Sbjct: 180 SDVWSFGILLWEIYSFGRVPYPRIPLKDVV--PR 211
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+ +GKG +G G V VK +K + F + V+ +L +H N+V +
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ-AFLAEASVMTQL-RHSNLVQLLGVI 83
Query: 402 FSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+ L +V +++ GS L R GR+ L + +K SL + + ++ G
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNN 137
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTP----LMNTPTVPSRSAGYRAPEVIETKKPTQK 516
F+ ++ + NVL+S+D +SDFGLT +T +P + + APE + KK + K
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK---WTAPEALREKKFSTK 194
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPR 549
SDV+SFG+LL E+ + G+ P +DVV PR
Sbjct: 195 SDVWSFGILLWEIYSFGRVPYPRIPLKDVV--PR 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 33/274 (12%)
Query: 344 LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
LG G +G Y+ + ++ + TV VK LKE M EF ++ V+ + +HPN+V +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 77
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK-F 461
+ ++ +F+ G+ LL R R E + L A I+ + K F
Sbjct: 78 REPPFYIITEFMTYGN---LLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQK 516
I ++ + N L+ ++ ++DFGL+ LM T + + + APE + K + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575
SDV++FGVLL E+ T G +P PG +D P V ++ + D + R E
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--PG----ID-PSQVYELLEK-------DYRMERPEGCP 236
Query: 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E++ ++++ +C P RP+ E+ + E +
Sbjct: 237 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 33/268 (12%)
Query: 305 PKEDFGSGVQ-EAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAIL------ 357
P E GSG+Q +N F + C ++ D++ LG+G++G + A
Sbjct: 11 PTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWE--LGEGAFGKVFLAECHNLLPE 68
Query: 358 EEGTTVVVKRLKEVVMGKRE-FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416
++ V VK LKE R+ F+++ E++ L QH ++V L+V++++
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEYMRH 127
Query: 417 GSF----------SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNI 466
G + LL G + PL + ++ A G+ ++ G F+ ++
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDL 184
Query: 467 KSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-------YRAPEVIETKKPTQKSDV 519
+ N L+ Q L I DFG++ + + T R G + PE I +K T +SDV
Sbjct: 185 ATRNCLVGQGLVVKIGDFGMSRDIYS-TDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 243
Query: 520 YSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
+SFGV+L E+ T GK P + + +D
Sbjct: 244 WSFGVVLWEIFTYGKQPWYQLSNTEAID 271
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+ +GKG +G G V VK +K + F + V+ +L +H N+V +
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ-AFLAEASVMTQL-RHSNLVQLLGVI 255
Query: 402 FSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+ L +V +++ GS L R GR+ L + +K SL + + ++ G
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNN 309
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTP----LMNTPTVPSRSAGYRAPEVIETKKPTQK 516
F+ ++ + NVL+S+D +SDFGLT +T +P + + APE + KK + K
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK---WTAPEALREKKFSTK 366
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPR 549
SDV+SFG+LL E+ + G+ P +DVV PR
Sbjct: 367 SDVWSFGILLWEIYSFGRVPYPRIPLKDVV--PR 398
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 30/233 (12%)
Query: 324 FEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQME 383
+E + + + ED E LG G++G YKA +E + + ++ + + E E M
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDT-KSEEELEDYMV 83
Query: 384 VVGRLS--QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA-LLHGNRGIGRTPLDWESRV 440
+ L+ HPN+V + ++ ++ ++ +F G+ A +L R PL ES++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PLT-ESQI 137
Query: 441 KISLGSA-KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
++ + ++H K I ++K+ N+L + D ++DFG++ NT T+ R
Sbjct: 138 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRD 193
Query: 500 A-----GYRAPEVI--ETKKP---TQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
+ + APEV+ ET K K+DV+S G+ L+EM A I+ P HE
Sbjct: 194 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM----AEIEPPHHE 242
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 342 EVLGKGSYGTTY--KAIL--EEGTTVVVKRLKEVVMGKRE---FEQQMEVVGRLSQHPNV 394
+VLG+GS+G + + + + G +K LK+ + R+ + + +++ ++ HP V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN-HPFV 92
Query: 395 VPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAH 452
V + Y F + KL L+ DF+ G L + + E VK L A G+ H
Sbjct: 93 VKLH-YAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALGLDH 145
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVI 508
+H+ I ++K N+LL ++ ++DFGL+ + S Y APEV+
Sbjct: 146 LHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ + +D +S+GVL+ EMLTG P Q ++ + L
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 342 EVLGKGSYGTTYKAILEEGTT-----VVVKRLKEVVMGKR--EFEQQMEVVGRLSQHPNV 394
+V+G G +G YK +L+ + V +K LK K+ +F + ++G+ S H N+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH-NI 108
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH-I 453
+ + +++ +++E G+ L G E V +G +GIA +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDG--------EFSVLQLVGMLRGIAAGM 160
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPE 506
++ ++ + N+L++ +L +SDFGL+ ++ + P ++G + APE
Sbjct: 161 KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
I +K T SDV+SFG+++ E++T G+ P
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 342 EVLGKGSYGTTYKAILEEGTTV----VVKRLKEVVMGKRE---FEQQMEVVGRLSQHPNV 394
+VLG+GS+G + G+ +K LK+ + R+ + + +++ ++ HP +
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFI 89
Query: 395 VPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAH 452
V + Y F + KL L+ DF+ G L + + E VK L A + H
Sbjct: 90 VKLH-YAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALALDH 142
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVI 508
+H+ I ++K N+LL ++ ++DFGL+ + S Y APEV+
Sbjct: 143 LHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ TQ +D +SFGVL+ EMLTG P Q ++ + +
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 342 EVLGKGSYGTTYKAILEEGTTV----VVKRLKEVVMGKRE---FEQQMEVVGRLSQHPNV 394
+VLG+GS+G + G+ +K LK+ + R+ + + +++ ++ HP +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFI 88
Query: 395 VPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAH 452
V + Y F + KL L+ DF+ G L + + E VK L A + H
Sbjct: 89 VKLH-YAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALALDH 141
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVI 508
+H+ I ++K N+LL ++ ++DFGL+ + S Y APEV+
Sbjct: 142 LHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ TQ +D +SFGVL+ EMLTG P Q ++ + +
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 44/294 (14%)
Query: 344 LGKGSYGTTYKA----IL--EEGTTVVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ I+ E T V VK + E + + EF + V+ + H +VV
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 84
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-----GIGRTPLDWESRVKISLGSAKGI 450
+ L+V + + G + L R GR P + ++++ A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ N+ + N +++ D I DFG+T + T G + A
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SD++SFGV+L E+ + + P Q +E V+ V
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF---------------V 246
Query: 564 FD-VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D L + +N E + ++++ C P+MRPT E+V ++ +D+ PS E
Sbjct: 247 MDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHPSFPE 297
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 44/294 (14%)
Query: 344 LGKGSYGTTYKA----IL--EEGTTVVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ I+ E T V VK + E + + EF + V+ + H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-----GIGRTPLDWESRVKISLGSAKGI 450
+ L+V + + G + L R GR P + ++++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ N+ + N +++ D I DFG+T + T G + A
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SD++SFGV+L E+ + + P Q +E V+ V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF---------------V 245
Query: 564 FD-VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D L + +N E + ++++ C P+MRPT E+V ++ +D+ PS E
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 342 EVLGKGSYGTTYKAILEEGTTV----VVKRLKEVVMGKRE---FEQQMEVVGRLSQHPNV 394
+VLG+GS+G + G+ +K LK+ + R+ + + +++ ++ HP +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFI 88
Query: 395 VPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAH 452
V + Y F + KL L+ DF+ G L + + E VK L A + H
Sbjct: 89 VKLH-YAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALALDH 141
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVI 508
+H+ I ++K N+LL ++ ++DFGL+ + S Y APEV+
Sbjct: 142 LHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ TQ +D +SFGVL+ EMLTG P Q ++ + +
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 336 LLRASAEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNV 394
LL S +G+GS G A + G V VK + +RE V+ R QH NV
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
V + Y +E ++ +F++ G+ + + + + L+ E + + +A++H
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDI------VSQVRLNEEQIATVCEAVLQALAYLH 158
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVIE 509
A I +IKS ++LL+ D + +SDFG ++ VP R + + APEVI
Sbjct: 159 AQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKXLVGTPYWMAPEVIS 214
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAP 535
+ D++S G++++EM+ G+ P
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKA----IL--EEGTTVVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ I+ E T V VK + E + + EF + V+ + H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-----GIGRTPLDWESRVKISLGSAKGI 450
+ L+V + + G + L R GR P + ++++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-------YR 503
A+++A KF+ ++ + N +++ D I DFG+T + T R G +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPVRWM 199
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
APE ++ T SD++SFGV+L E+ + + P Q +E V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--------------- 244
Query: 563 VFD-VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPS 612
V D L + +N E + ++++ C P+MRPT E+V ++ +D+ PS
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHPS 293
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 343 VLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVVP 396
V+G G +G L+ V +K LK K R+F + ++G+ HPNVV
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFD-HPNVVH 108
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH-IHA 455
+ ++V +F+E G+ A L + G + V +G +GIA +
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDG--------QFTVIQLVGMLRGIAAGMRY 160
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEVI 508
++ ++ + N+L++ +L +SDFGL+ ++ + P + G + APE I
Sbjct: 161 LADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 509 ETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
+ +K T SDV+S+G+++ E+++ G+ P ++DV+
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 258
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 324 FEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQME 383
+E + + + ED E LG G++G YKA +E + + ++ + + E E M
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDT-KSEEELEDYMV 83
Query: 384 VVGRLS--QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA-LLHGNRGIGRTPLDWESRV 440
+ L+ HPN+V + ++ ++ ++ +F G+ A +L R PL ES++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PLT-ESQI 137
Query: 441 KISLGSA-KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
++ + ++H K I ++K+ N+L + D ++DFG++ NT + R
Sbjct: 138 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRD 193
Query: 500 A-----GYRAPEVI--ETKKP---TQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
+ + APEV+ ET K K+DV+S G+ L+EM A I+ P HE
Sbjct: 194 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM----AEIEPPHHE 242
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 161
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ F+ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 162 YLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 264
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 41/282 (14%)
Query: 343 VLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVVP 396
V+G G +G L+ V +K LK K R+F + ++G+ HPN++
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIH 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI-AHIHA 455
+ ++V +++E GS L N G + V +G +GI A +
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG--------QFTVIQLVGMLRGISAGMKY 139
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEVI 508
++ ++ + N+L++ +L +SDFGL+ ++ + P + G + APE I
Sbjct: 140 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 509 ETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
+K T SDV+S+G+++ E+++ G+ P ++DV+ V E +
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-------KAVEEGY-------- 244
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + + + Q+ + C K + RP +E+V M++ +
Sbjct: 245 --RLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 324 FEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQME 383
+E + + + ED E LG G++G YKA +E + + ++ + + E E M
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDT-KSEEELEDYMV 83
Query: 384 VVGRLS--QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA-LLHGNRGIGRTPLDWESRV 440
+ L+ HPN+V + ++ ++ ++ +F G+ A +L R PL ES++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PLT-ESQI 137
Query: 441 KISLGSA-KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR- 498
++ + ++H K I ++K+ N+L + D ++DFG++ NT + R
Sbjct: 138 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRD 193
Query: 499 ----SAGYRAPEVI--ETKKP---TQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
+ + APEV+ ET K K+DV+S G+ L+EM A I+ P HE
Sbjct: 194 XFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM----AEIEPPHHE 242
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ GK ++++++ +L H N+V +R ++
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLD-HCNIVRLRYFF 82
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ A + H +R P+ + VK+ + + +A+IH
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 139
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 232
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 128
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + + P T S + Y PE+IE +
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 235
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+S+N+ S+
Sbjct: 236 --DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNSQNKESA 277
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 344 LGKGSYGTTYKA----IL--EEGTTVVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ I+ E T V VK + E + + EF + V+ + H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-----GIGRTPLDWESRVKISLGSAKGI 450
+ L+V + + G + L R GR P + ++++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-------YR 503
A+++A KF+ ++ + N +++ D I DFG+T + T R G +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPVRWM 199
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
APE ++ T SD++SFGV+L E+ + + P Q +E V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--------------- 244
Query: 563 VFD-VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
V D L + +N E + ++++ C P MRPT E+V ++ +D+ PS E
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKA----IL--EEGTTVVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ I+ E T V VK + E + + EF + V+ + H +VV
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 80
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-----GIGRTPLDWESRVKISLGSAKGI 450
+ L+V + + G + L R GR P + ++++ A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-------YR 503
A+++A KF+ ++ + N +++ D I DFG+T + T R G +
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPVRWM 196
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
APE ++ T SD++SFGV+L E+ + + P Q +E V+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--------------- 241
Query: 563 VFD-VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPS 612
V D L + +N E + ++++ C P MRPT E+V ++ +D+ PS
Sbjct: 242 VMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHPS 290
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 344 LGKGSYGTTYKA----IL--EEGTTVVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ I+ E T V VK + E + + EF + V+ + H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-----GIGRTPLDWESRVKISLGSAKGI 450
+ L+V + + G + L R GR P + ++++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-------YR 503
A+++A KF+ ++ + N +++ D I DFG+T + T R G +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TAYYRKGGKGLLPVRWM 199
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
APE ++ T SD++SFGV+L E+ + + P Q +E V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--------------- 244
Query: 563 VFD-VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
V D L + +N E + ++++ C P MRPT E+V ++ +D+ PS E
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 342 EVLGKGSYGTTYKA-ILEEGTTV--VVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVP 396
+V+G+G++G KA I ++G + +KR+KE R+F ++EV+ +L HPN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ + L ++ G+ L +R + P + S S++ + H A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 457 VG--------GKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSAGYRAP 505
V +FI N+ + N+L+ ++ I+DFGL+ + T+ + A
Sbjct: 148 VARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 207
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLT 531
E + T SDV+S+GVLL E+++
Sbjct: 208 ESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM---- 382
+ D D++R LGKG +G Y A ++ ++ +K L + + K E Q+
Sbjct: 10 KFTIDDFDIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 383 EVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI 442
E+ L +HPN++ + Y+ + L+ +F G L + GR +
Sbjct: 66 EIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFME 121
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR---- 498
L A +H K I +IK N+L+ + I+DFG + ++ P++ R
Sbjct: 122 ELADA-----LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCG 174
Query: 499 SAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
+ Y PE+IE K +K D++ GVL E L G P +P H +
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 344 LGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS-----QHPNVVPI 397
+G GS+G Y A + V +K++ GK+ E+ +++ + +HPN +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMS--YSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
R Y + LV ++ GS S LL + + PL ++ G+ +G+A++H+
Sbjct: 81 RGCYLREHTAWLVMEYC-LGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSH- 134
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETKKPTQ-- 515
I ++K+ N+LLS+ + DFG +M + + APEVI Q
Sbjct: 135 --NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYD 192
Query: 516 -KSDVYSFGVLLLEMLTGKAPI 536
K DV+S G+ +E+ K P+
Sbjct: 193 GKVDVWSLGITCIELAERKPPL 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+ +GKG +G G V VK +K + F + V+ +L +H N+V +
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ-AFLAEASVMTQL-RHSNLVQLLGVI 74
Query: 402 FSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+ L +V +++ GS L R GR+ L + +K SL + + ++ G
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNN 128
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTP----LMNTPTVPSRSAGYRAPEVIETKKPTQK 516
F+ ++ + NVL+S+D +SDFGLT +T +P + + APE + + K
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK---WTAPEALREAAFSTK 185
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPR 549
SDV+SFG+LL E+ + G+ P +DVV PR
Sbjct: 186 SDVWSFGILLWEIYSFGRVPYPRIPLKDVV--PR 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 343 VLGKGSYGTTYKA-ILEEGTTVVVKRLK-EVVMGKREFEQQM---EVVGRLSQHPNVVPI 397
VLGKGS+G A + E G VK LK +V++ + E M ++ HP + +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ + D V +F+ G + +R E+R + +A+ I+ +
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD------EARARFY--AAEIISALMFLH 141
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPS--RSAGYRAPEVIETKKP 513
I ++K NVLL + ++DFG+ + N T + + Y APE+++
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 514 TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
D ++ GVLL EML G AP +A +D+ +
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMY 81
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ + L+ +F G L + GR + L A +H
Sbjct: 82 NYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADA-----LHYCHE 133
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVIETKKPT 514
K I +IK N+L+ + I+DFG + ++ P++ R + Y PE+IE K
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
+K D++ GVL E L G P +P H +
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 30/264 (11%)
Query: 329 YNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVG-R 387
Y+ DL+D + LG+GS+ K + ++ + ++ + E Q E+ +
Sbjct: 10 YDLDLKD------KPLGEGSFSICRKCVHKKSNQAFAVK---IISKRMEANTQKEITALK 60
Query: 388 LSQ-HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS 446
L + HPN+V + + + LV + + G + + T + R +S
Sbjct: 61 LCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS--- 117
Query: 447 AKGIAHIHAAVGGKFILGNIKSSNVLLSQD---LQGCISDFG---LTPLMNTP-TVPSRS 499
++H+H VG + ++K N+L + + L+ I DFG L P N P P +
Sbjct: 118 --AVSHMHD-VG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFT 172
Query: 500 AGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
Y APE++ + D++S GV+L ML+G+ P Q+ H+ + V+ + ++
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS--HDRSLTCTSAVE--IMKKI 228
Query: 560 TSEVFDVELMRYENIEEEMVQMLQ 583
F E ++N+ +E ++Q
Sbjct: 229 KKGDFSFEGEAWKNVSQEAKDLIQ 252
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------YRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR A Y PE+IE +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRAALCGTLDYLPPEMIEGRM 185
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 237
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 238 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 279
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 161
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 264
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMY 80
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ + L+ +F G L + GR + L A +H
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADA-----LHYCHE 132
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVIETKKPT 514
K I +IK N+L+ + I+DFG + ++ P++ R + Y PE+IE K
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
+K D++ GVL E L G P +P H +
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS-----QHPNVVPIR 398
+G GS+G Y A + VV + K GK+ E+ +++ + +HPN + R
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIK-KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y + LV ++ GS S LL + + PL ++ G+ +G+A++H+
Sbjct: 121 GCYLREHTAWLVMEYC-LGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSH-- 173
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETKKPTQ--- 515
I ++K+ N+LLS+ + DFG +M + + APEVI Q
Sbjct: 174 -NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 516 KSDVYSFGVLLLEMLTGKAPI 536
K DV+S G+ +E+ K P+
Sbjct: 233 KVDVWSLGITCIELAERKPPL 253
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 342 EVLGKGSYGTTYKAILEEGTTV-VVKRLK-EVVMGKREFEQQM---EVVGRLSQHPNVVP 396
++LGKGS+G + A ++ +K LK +VV+ + E M V+ +HP +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ + +K+ V +++ G L++ + + L + + +A+ I +
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGD---LMYHIQSCHKFDLS-----RATFYAAEIILGLQFL 134
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTP---LMNTPT-VPSRSAGYRAPEVIETKK 512
+ ++K N+LL +D I+DFG+ L + T + Y APE++ +K
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD--------LPRWVQSVVRE 557
D +SFGVLL EML G++P E++ PRW++ ++
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 37/276 (13%)
Query: 344 LGKGSYGTTYKAILEEGT-TVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
LG G YG Y + ++ + TV VK LKE M EF ++ V+ + +HPN+V +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 98
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK-F 461
+ +V +++ G+ LL R R E + L A I+ + K F
Sbjct: 99 LEPPFYIVTEYMPYGN---LLDYLRECNRE----EVTAVVLLYMATQISSAMEYLEKKNF 151
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKPTQK 516
I ++ + N L+ ++ ++DFGL+ LM T + + + APE + + K
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 517 SDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV--ELMRYEN 573
SDV++FGVLL E+ T G +P PG +DL S+V+D+ + R E
Sbjct: 212 SDVWAFGVLLWEIATYGMSPY--PG----IDL-------------SQVYDLLEKGYRMEQ 252
Query: 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E ++ ++ +C P RP+ E + E +
Sbjct: 253 PEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 80
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 132
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 235
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 236 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 161
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 264
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 161
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 264
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 97
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 149
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 150 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 209
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 252
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 253 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 46/273 (16%)
Query: 344 LGKGSYGTTY-------KAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVP 396
LGKG +G Y K IL V+ K E + + +++E+ L +HPN++
Sbjct: 16 LGKGKFGNVYLAREKNSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILR 72
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 73 LYGYFHDSTRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK 127
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------YRAPEVIET 510
K I +IK N+LL + I+DFG + ++ P+ SR A Y PE+IE
Sbjct: 128 ---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRAALCGTLDYLPPEMIEG 180
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570
+ +K D++S GVL E L GK P +A ++D + + R E+T F E R
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT------YKRISRVEFTFPDFVTEGAR 234
Query: 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 235 ------DLISRL------LKHNPSQRPMLREVL 255
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 53/280 (18%)
Query: 342 EVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPN 393
E LG+ +G YK L E+ V +K LK+ G + EF + + RL QHPN
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPN 90
Query: 394 VVPIRAYYFSKDEKL-LVYDFIEAGS---FSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
VV + +KD+ L +++ + G F + + +G T D + VK +L
Sbjct: 91 VVCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST--DDDRTVKSAL-EPPD 146
Query: 450 IAHIHAAVGG--------KFILGNIKSSNVLLSQDLQGCISDFGL---------TPLMNT 492
H+ A + + ++ + NVL+ L ISD GL L+
Sbjct: 147 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 493 PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV------ 545
+P R + APE I K + SD++S+GV+L E+ + G P ++DVV
Sbjct: 207 SLLPIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 263
Query: 546 -------DLPRWVQSVVREEWTSEVFDVELMRYENIEEEM 578
D P WV +++ E W F R+++I +
Sbjct: 264 QVLPCPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 301
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 161
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 264
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 107
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 159
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 160 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 262
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 263 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ V +K LK K R+F + ++G+ HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 78
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ +++E GS A L N G V +G +GI
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--------RFTVIQLVGMLRGIGSGMK 130
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFG++ ++ + P + G + APE
Sbjct: 131 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
I +K T SDV+S+G+++ E+++ G+ P ++DV+
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 229
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 343 VLGKGSYGTTYKAIL--EEGT--TVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVP 396
+LGKG +G+ +A L E+G+ V VK LK ++ + E+ + + + HP+V
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 397 IRAYYFSKDEK------LLVYDFIEAGSFSALLHGNRGIGRTP--LDWESRVKISLGSAK 448
+ K +++ F++ G A L +R IG P L ++ V+ + A
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-IGENPFNLPLQTLVRFMVDIAC 148
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP--- 505
G+ ++ + FI ++ + N +L++D+ C++DFGL+ + + + + P
Sbjct: 149 GMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 506 ---EVIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
E + T SDV++FGV + E++T G+ P
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 44/294 (14%)
Query: 344 LGKGSYGTTYKA----IL--EEGTTVVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ I+ E T V VK + E + + EF + V+ + H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-----GIGRTPLDWESRVKISLGSAKGI 450
+ L+V + + G + L R GR P + ++++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N +++ D I DFG+T + T G + A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SD++SFGV+L E+ + + P Q +E V+ V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF---------------V 245
Query: 564 FD-VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D L + +N E + ++++ C P MRPT E+V ++ +D+ PS E
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 342 EVLGKGSYGTTYKAILEEGTTV-VVKRLK-EVVMGKREFEQQM---EVVGRLSQHPNVVP 396
++LGKGS+G + A ++ +K LK +VV+ + E M V+ +HP +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ + +K+ V +++ G L++ + + L + + +A+ I +
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGD---LMYHIQSCHKFDLS-----RATFYAAEIILGLQFL 135
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTP---LMNTPTVP-SRSAGYRAPEVIETKK 512
+ ++K N+LL +D I+DFG+ L + T + Y APE++ +K
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD--------LPRWVQSVVRE 557
D +SFGVLL EML G++P E++ PRW++ ++
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 248
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ V +K LK K R+F + ++G+ HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 72
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ +++E GS A L N G V +G +GI
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--------RFTVIQLVGMLRGIGSGMK 124
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFG++ ++ + P + G + APE
Sbjct: 125 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
I +K T SDV+S+G+++ E+++ G+ P ++DV+
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 223
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 161
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL ++ + P + G + +PE
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 264
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYF 81
Query: 401 YFSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHI 453
++S EK LV D++ + H +R P+ + VK+ + + +A+I
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 454 HAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAP 505
H+ +IK N+LL D L+ C DFG + N + SR YRAP
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 506 EVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
E+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R +
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYF 82
Query: 401 YFSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHI 453
++S EK LV D++ + H +R P+ + VK+ + + +A+I
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 139
Query: 454 HAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAP 505
H+ +IK N+LL D L+ C DFG + N + SR YRAP
Sbjct: 140 HSF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 192
Query: 506 EVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
E+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 28/268 (10%)
Query: 344 LGKGSYGTTYKA-ILEEGTTVVVKRLKEV-VMGKREFEQQMEVVGRLSQ--HPNVVPIRA 399
+G+G + Y+A L +G V +K+++ +M + ++ + L Q HPNV+ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 400 YYFSKDEKLLVYDFIEAGSFSALL-HGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+ +E +V + +AG S ++ H + P + + L SA + H+H+
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA--LEHMHSR-- 155
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVIETKKPT 514
+ + +IK +NV ++ + D GL ++ T + S Y +PE I
Sbjct: 156 -RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
KSD++S G LL EM A +Q+P + D ++L + + E D + ++
Sbjct: 215 FKSDIWSLGCLLYEM----AALQSPFYGDKMNLYSLCKKI-------EQCDYPPLPSDHY 263
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEV 602
EE+ Q++ + C+ P+ RP + V
Sbjct: 264 SEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 101
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 158
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 159 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 211
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 251
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 90
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 147
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 148 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 200
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 240
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ +V +K L + + K E Q+ E+ L HPN++ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL-HHPNILRLY 89
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y++ + L+ ++ G L + D + I A + + H G
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQKS-----CTFDEQRTATIMEELADALMYCH---G 141
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA----GYRAPEVIETKKPT 514
K I +IK N+LL + I+DFG + ++ P++ ++ Y PE+IE +
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
+K D++ GVL E+L G P ++ H +
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNET 229
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYF 81
Query: 401 YFSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHI 453
++S EK LV D++ + H +R P+ + VK+ + + +A+I
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 454 HAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAP 505
H+ +IK N+LL D L+ C DFG + N + SR YRAP
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 506 EVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
E+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYF 81
Query: 401 YFSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHI 453
++S EK LV D++ + H +R P+ + VK+ + + +A+I
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 454 HAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAP 505
H+ +IK N+LL D L+ C DFG + N + SR YRAP
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 506 EVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
E+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 94
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 151
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 152 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 204
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 244
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 94
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 151
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 152 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 204
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 244
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 53/280 (18%)
Query: 342 EVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPN 393
E LG+ +G YK L E+ V +K LK+ G + EF + + RL QHPN
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPN 73
Query: 394 VVPIRAYYFSKDEKL-LVYDFIEAGS---FSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
VV + +KD+ L +++ + G F + + +G T D + VK +L
Sbjct: 74 VVCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST--DDDRTVKSAL-EPPD 129
Query: 450 IAHIHAAVGG--------KFILGNIKSSNVLLSQDLQGCISDFGL---------TPLMNT 492
H+ A + + ++ + NVL+ L ISD GL L+
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 493 PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV------ 545
+P R + APE I K + SD++S+GV+L E+ + G P ++DVV
Sbjct: 190 SLLPIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 246
Query: 546 -------DLPRWVQSVVREEWTSEVFDVELMRYENIEEEM 578
D P WV +++ E W F R+++I +
Sbjct: 247 QVLPCPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 284
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 116
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 173
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 174 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 226
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 266
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 342 EVLGKGSYGTTYKA-ILEEGTTV--VVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVP 396
+V+G+G++G KA I ++G + +KR+KE R+F ++EV+ +L HPN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ + L ++ G+ L +R + P + S S++ + H A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 457 VG--------GKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSAGYRAP 505
V +FI ++ + N+L+ ++ I+DFGL+ + T+ + A
Sbjct: 141 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 200
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLT 531
E + T SDV+S+GVLL E+++
Sbjct: 201 ESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 44/294 (14%)
Query: 344 LGKGSYGTTYKA----IL--EEGTTVVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ I+ E T V VK + E + + EF + V+ + H +VV
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 82
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-----GIGRTPLDWESRVKISLGSAKGI 450
+ L+V + + G + L R GR P + ++++ A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N +++ D I DFG+T + T G + A
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SD++SFGV+L E+ + + P Q +E V+ V
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF---------------V 244
Query: 564 FD-VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D L + +N E + ++++ C P MRPT E+V ++ +D+ PS E
Sbjct: 245 MDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHPSFPE 295
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 339 ASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGR-LSQHPNVVPI 397
A E +GKG YG ++ L G +V VK ++ + ++ E+ L +H N++
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSS--RDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 398 RAYYF----SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
A S + L+ + E GS L R L+ +++++ +A G+AH+
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ------RQTLEPHLALRLAVSAACGLAHL 121
Query: 454 HAAVGG-----KFILGNIKSSNVLLSQDLQGCISDFGLTPLM----------NTPTVPSR 498
H + G + KS NVL+ +LQ CI+D GL + N P V ++
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 499 SAGYRAPEVIETKKPT------QKSDVYSFGVLLLEM 529
Y APEV++ + T + +D+++FG++L E+
Sbjct: 182 R--YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 342 EVLGKGSYGTTYKA-ILEEG--TTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVP 396
+V+G+G++G KA I ++G +KR+KE R+F ++EV+ +L HPN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ + L ++ G+ L +R + P + S S++ + H A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 457 VG--------GKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSAGYRAP 505
V +FI ++ + N+L+ ++ I+DFGL+ + T+ + A
Sbjct: 151 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 210
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLT 531
E + T SDV+S+GVLL E+++
Sbjct: 211 ESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 95
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 152
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 153 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 205
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 245
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 135/295 (45%), Gaps = 43/295 (14%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKR--LKEVVMGKREFEQQMEVVGR 387
+++L++++ + A + + +Y K V +KR L++ E ++++ + +
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKK------EKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISL 444
HPN+V + KDE LV + GS ++ G LD + I
Sbjct: 70 -CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------ 498
+G+ ++H G+ I ++K+ N+LL +D I+DFG++ + T +R
Sbjct: 129 EVLEGLEYLHK--NGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 499 ---SAGYRAPEVIETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL-----PR 549
+ + APEV+E + K+D++SFG+ +E+ TG AP V+ L P
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP 245
Query: 550 WVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604
+++ V+++ L +Y +M+ + C+ K P+ RPT E++R
Sbjct: 246 SLETGVQDKEM-------LKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 287
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 110
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 167
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 168 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 220
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 260
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R +
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYF 85
Query: 401 YFSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHI 453
++S EK LV D++ + H +R P+ + VK+ + + +A+I
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 142
Query: 454 HAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAP 505
H+ +IK N+LL D L+ C DFG + N + SR YRAP
Sbjct: 143 HSF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 195
Query: 506 EVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
E+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 236
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN 393
+++ +V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCN 74
Query: 394 VVPIRAYYFSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
+V +R +++S EK LV D++ + H +R P+ + VK+ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQL 131
Query: 448 -KGIAHIHAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSR 498
+ +A+IH+ +IK N+LL D L+ C DFG + N + SR
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSR 186
Query: 499 SAGYRAPEVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
YRAPE+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 187 Y--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 232
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 87
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 144
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 145 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 197
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 237
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 135/295 (45%), Gaps = 43/295 (14%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKR--LKEVVMGKREFEQQMEVVGR 387
+++L++++ + A + + +Y K V +KR L++ E ++++ + +
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKK------EKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISL 444
HPN+V + KDE LV + GS ++ G LD + I
Sbjct: 65 -CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------ 498
+G+ ++H G+ I ++K+ N+LL +D I+DFG++ + T +R
Sbjct: 124 EVLEGLEYLHK--NGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 499 ---SAGYRAPEVIETKKPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL-----PR 549
+ + APEV+E + K+D++SFG+ +E+ TG AP V+ L P
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP 240
Query: 550 WVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604
+++ V+++ L +Y +M+ + C+ K P+ RPT E++R
Sbjct: 241 SLETGVQDKEM-------LKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 282
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 116
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 173
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 174 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 226
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 266
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 133/298 (44%), Gaps = 56/298 (18%)
Query: 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
E++G G +G +KA +G T V+KR+K + E++++ + +L H N+V
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVK---YNNEKAEREVKALAKLD-HVNIVHYNGC 72
Query: 401 Y--FSKDEK--------------LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ F D + + +F + G+ + RG LD +++
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFE 129
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG--- 501
KG+ +IH+ K I ++K SN+ L Q I DFGL + RS G
Sbjct: 130 QITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLR 186
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGH--EDVVDLPRWVQSVVREEW 559
Y +PE I ++ ++ D+Y+ G++L E+L H + + ++ +R+
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL----------HVCDTAFETSKFFTD-LRDGI 235
Query: 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQ 617
S++FD + E+ ++Q L ++K P+ RP E++R + + S +N+
Sbjct: 236 ISDIFDKK-------EKTLLQKL------LSKKPEDRPNTSEILRTLTVWKKSPEKNE 280
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ GK ++++++ +L H N+V +R ++
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLD-HCNIVRLRYFF 82
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 139
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 192
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 232
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN 393
+++ +V+G GS+G Y+A L + +V +K+V+ GK ++++++ +L H N
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLD-HCN 74
Query: 394 VVPIRAYYFSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
+V +R +++S EK LV D++ + H +R P+ + VK+ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQL 131
Query: 448 -KGIAHIHAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSR 498
+ +A+IH+ +IK N+LL D L+ C DFG + N + SR
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSR 186
Query: 499 SAGYRAPEVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
YRAPE+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 187 Y--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 232
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V +++E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 161
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL ++ + P + G + +PE
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 264
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 118
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 175
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 176 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 228
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 268
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N+V +R ++
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFF 120
Query: 402 FSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIH 454
+S EK LV D++ + H +R P+ + VK+ + + +A+IH
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 177
Query: 455 AAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSRSAGYRAPE 506
+ +IK N+LL D L+ C DFG + N + SR YRAPE
Sbjct: 178 SF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 230
Query: 507 VI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 270
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN 393
+++ +V+G GS+G Y+A L + +V +K+V+ KR ++++++ +L H N
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLD-HCN 153
Query: 394 VVPIRAYYFSKDEKL------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
+V +R +++S EK LV D++ + H +R P+ + VK+ +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQL 210
Query: 448 -KGIAHIHAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLM-----NTPTVPSR 498
+ +A+IH+ +IK N+LL D L+ C DFG + N + SR
Sbjct: 211 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSR 265
Query: 499 SAGYRAPEVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
YRAPE+I T DV+S G +L E+L G+ PI PG V L
Sbjct: 266 Y--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PI-FPGDSGVDQL 311
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 127
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 184
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 234
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 235 --DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 276
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 132
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 239
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 240 --DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 42/290 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 132
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE IE +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHD 189
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 239
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 240 --DLISRL------LKHNPSQRPXLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 237
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 238 --DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 279
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 91
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 92 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 144
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 251
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 252 --DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 293
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQME---VVGRLSQHPNVVP 396
+ LG+GS+G A G V +K + + V+ K + + ++E RL +HP+++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ SKDE ++V ++ F ++ ++ + R + SA H H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA----RRFFQQIISAVEYCHRH-- 131
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK-K 512
K + ++K N+LL + L I+DFGL+ +M S G Y APEVI K
Sbjct: 132 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 513 PTQKSDVYSFGVLLLEMLTGKAP 535
+ DV+S GV+L ML + P
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQME---VVGRLSQHPNVVP 396
+ LG+GS+G A G V +K + + V+ K + + ++E RL +HP+++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ SKDE ++V ++ F ++ ++ + R + SA H H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA----RRFFQQIISAVEYCHRH-- 132
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK-K 512
K + ++K N+LL + L I+DFGL+ +M S G Y APEVI K
Sbjct: 133 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 513 PTQKSDVYSFGVLLLEMLTGKAP 535
+ DV+S GV+L ML + P
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLP 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQME---VVGRLSQHPNVVP 396
+ LG+GS+G A G V +K + + V+ K + + ++E RL +HP+++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ SKDE ++V ++ F ++ ++ + R + SA H H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA----RRFFQQIISAVEYCHRH-- 126
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK-K 512
K + ++K N+LL + L I+DFGL+ +M S G Y APEVI K
Sbjct: 127 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAP 535
+ DV+S GV+L ML + P
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLP 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 52/329 (15%)
Query: 305 PKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVV 364
P+E+ S + E K + LED LGKG +G Y A ++ ++
Sbjct: 13 PEEELASKQKNEESKKR--------QWALEDF--EIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 365 -VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419
+K L + + K E Q+ E+ L +HPN++ + Y+ L+ ++ G+
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG 479
L + D + A +++ H+ + I +IK N+LL +
Sbjct: 122 YRELQK-----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 173
Query: 480 CISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAP 535
I+DFG + ++ P T + Y PE+IE + +K D++S GVL E L GK P
Sbjct: 174 KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
Query: 536 IQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDM 595
+A +++ + + R E+T F E R +++ L + P
Sbjct: 232 FEANTYQET------YKRISRVEFTFPDFVTEGAR------DLISRL------LKHNPSQ 273
Query: 596 RPTMEEVVR----MIEDIRPSDSENQPSS 620
RP + EV+ +PS+ +N+ S+
Sbjct: 274 RPMLREVLEHPWITANSSKPSNCQNKESA 302
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 34/224 (15%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ V +K LK K R+F + ++G+ HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 93
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ +++E GS A L N G V +G +GI
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--------RFTVIQLVGMLRGIGS--- 142
Query: 456 AVGGKF------ILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------Y 502
G K+ + ++ + N+L++ +L +SDFG++ ++ + P + G +
Sbjct: 143 --GMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 200
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
APE I +K T SDV+S+G+++ E+++ G+ P ++DV+
Sbjct: 201 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 244
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +F+ GS L ++ +D ++ + KG+ ++
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 135
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQME---VVGRLSQHPNVVP 396
+ LG+GS+G A G V +K + + V+ K + + ++E RL +HP+++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ SKDE ++V ++ F ++ ++ + R + SA H H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA----RRFFQQIISAVEYCHRH-- 122
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK-K 512
K + ++K N+LL + L I+DFGL+ +M S G Y APEVI K
Sbjct: 123 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 513 PTQKSDVYSFGVLLLEMLTGKAP 535
+ DV+S GV+L ML + P
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLP 202
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 77
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 133
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I N+ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 134 K---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 221
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 42/290 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G L + D + A +++ H+
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYITELANALSYCHSK-- 132
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 239
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 240 --DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V + +E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 161
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 264
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 324 FEGCSYNFDLEDLLRASAEVLGK-GSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQM 382
+E + + + ED E++G+ G +G YKA +E + + ++ + + E E M
Sbjct: 1 YEHVTRDLNPEDFW----EIIGELGDFGKVYKAQNKETSVLAAAKVIDT-KSEEELEDYM 55
Query: 383 EVVGRLS--QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA-LLHGNRGIGRTPLDWESR 439
+ L+ HPN+V + ++ ++ ++ +F G+ A +L R + ES+
Sbjct: 56 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT------ESQ 109
Query: 440 VKISLGSA-KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR 498
+++ + ++H K I ++K+ N+L + D ++DFG++ NT T R
Sbjct: 110 IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTXIQR 165
Query: 499 SAGY------RAPEVI--ETKKP---TQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
+ APEV+ ET K K+DV+S G+ L+EM A I+ P HE
Sbjct: 166 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM----AEIEPPHHE 216
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 41/283 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 80
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V + +E GS + L + D + V +G +GIA
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIASGMK 132
Query: 456 AVGG-KFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------YRAPEV 507
+ ++ ++ + N+L++ +L +SDFGL+ ++ + P + G + +PE
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566
I +K T SDV+S+G++L E+++ G+ P ++DV+ + D
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------KAVD- 235
Query: 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
E R + + Q+ + C K + RP E++V +++ +
Sbjct: 236 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 46/297 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 127
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRTDLCGTLDYLPPEMIEGRM 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSSEDKLK 625
+++ L + P RP + EV+ +PS+ +N+ S+ L+
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAAAALE 281
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 128
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRDTLCGTLDYLPPEMIEGRM 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 235
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 236 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 277
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 128
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRTDLCGTLDYLPPEMIEGRM 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 235
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 236 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 277
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 32/247 (12%)
Query: 325 EGCSYNFDLEDLLRASAEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMGKRE- 377
+ C ++ D++ LG+G++G + A ++ V VK LKE R+
Sbjct: 9 DACVHHIKRRDIVLKWE--LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD 66
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF----------SALLHGNR 427
F+++ E++ L QH ++V L+V++++ G + LL G
Sbjct: 67 FQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 125
Query: 428 GIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487
+ PL + ++ A G+ ++ G F+ ++ + N L+ Q L I DFG++
Sbjct: 126 DVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
Query: 488 PLMNTPTVPSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAP 539
+ + T R G + PE I +K T +SDV+SFGV+L E+ T GK P
Sbjct: 183 RDIYS-TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 241
Query: 540 GHEDVVD 546
+ + +D
Sbjct: 242 SNTEAID 248
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 32/247 (12%)
Query: 325 EGCSYNFDLEDLLRASAEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMGKRE- 377
+ C ++ D++ LG+G++G + A ++ V VK LKE R+
Sbjct: 3 DACVHHIKRRDIVLKWE--LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD 60
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF----------SALLHGNR 427
F+++ E++ L QH ++V L+V++++ G + LL G
Sbjct: 61 FQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 119
Query: 428 GIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487
+ PL + ++ A G+ ++ G F+ ++ + N L+ Q L I DFG++
Sbjct: 120 DVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
Query: 488 PLMNTPTVPSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAP 539
+ + T R G + PE I +K T +SDV+SFGV+L E+ T GK P
Sbjct: 177 RDIYS-TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 235
Query: 540 GHEDVVD 546
+ + +D
Sbjct: 236 SNTEAID 242
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 127
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRTELCGTLDYLPPEMIEGRM 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 276
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 132
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRTDLCGTLDYLPPEMIEGRM 187
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 239
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 240 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 100
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 153
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRDDLCGTLDYLPPEMIEGRM 208
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 260
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 261 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 302
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 76
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 129
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRXXLCGTLDYLPPEMIEGRM 184
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 236
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 237 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 278
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 42/271 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 127
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------YRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR A Y PE+IE +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRAALCGTLDYLPPEMIEGRM 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREVL 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 138/302 (45%), Gaps = 43/302 (14%)
Query: 311 SGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKE 370
SGV +N ++F+ + D E+L E +GKGS+G +K I VV ++ +
Sbjct: 9 SGVDLGTEN--LYFQ----SMDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID 61
Query: 371 VVMGKREFEQQMEVVGRLSQ--HPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNR 427
+ + E E + + LSQ P V Y KD KL ++ +++ GS LL
Sbjct: 62 LEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPG- 119
Query: 428 GIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487
PLD I KG+ ++H+ K I +IK++NVLLS+ + ++DFG+
Sbjct: 120 -----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 171
Query: 488 -PLMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
L +T + G + APEVI+ K+D++S G+ +E+ G+ P
Sbjct: 172 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 231
Query: 544 VVDL-PRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEV 602
V+ L P+ + ++ + +E V+ +C+ K P RPT +E+
Sbjct: 232 VLFLIPKNNPPTLEGNYSKPL------------KEFVE------ACLNKEPSFRPTAKEL 273
Query: 603 VR 604
++
Sbjct: 274 LK 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 132/288 (45%), Gaps = 51/288 (17%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPNVV 395
+V+G G +G L+ + +V +K LK K R+F + ++G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ ++V + +E GS + L + D + V +G +GIA
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--------DAQFTVIQLVGMLRGIAS--- 158
Query: 456 AVGGKFI--LG----NIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPSRSAG------Y 502
G K++ +G ++ + N+L++ +L +SDFGL+ ++ + P + G +
Sbjct: 159 --GMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTS 561
+PE I +K T SDV+S+G++L E+++ G+ P ++DV+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI---------------- 260
Query: 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ D E R + + Q+ + C K + RP E++V +++ +
Sbjct: 261 KAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 292 TAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEV-LGKGSYG 350
T A + R PK + GV EK K V +E Y E++ A+ ++ LG+GS+G
Sbjct: 54 TWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYE---YR---EEVHWATHQLRLGRGSFG 107
Query: 351 TTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLV 410
++ +E+ T +K+V + E+ M G S P +VP+ +
Sbjct: 108 EVHR--MEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS--PRIVPLYGAVREGPWVNIF 163
Query: 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIHAAVGGKFILGNIKSS 469
+ +E GS L+ + G P E R LG A +G+ ++H+ + + G++K+
Sbjct: 164 MELLEGGSLGQLV---KEQGCLP---EDRALYYLGQALEGLEYLHSR---RILHGDVKAD 214
Query: 470 NVLLSQD-LQGCISDFG----LTP------LMNTPTVPSRSAGYRAPEVIETKKPTQKSD 518
NVLLS D + DFG L P L+ +P + APEV+ + K D
Sbjct: 215 NVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET-HMAPEVVLGRSCDAKVD 273
Query: 519 VYSFGVLLLEMLTGKAP 535
V+S ++L ML G P
Sbjct: 274 VWSSCCMMLHMLNGCHP 290
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
+ +S + L+ +++ GS L H R L + S++ KG+ ++
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI------CKGMEYL 133
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPE 506
++I ++ + N+L+ + + I DFGLT ++ + + G + APE
Sbjct: 134 GTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
+ K + SDV+SFGV+L E+ T ++P E
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 226
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 46/291 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 127
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRTDLCGTLDYLPPEMIEGRM 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPS 619
+++ L + P RP + EV+ +PS+ +N+ S
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKES 275
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 292 TAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEV-LGKGSYG 350
T A + R PK + GV EK K V +E Y E++ A+ ++ LG+GS+G
Sbjct: 35 TWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYE---YR---EEVHWATHQLRLGRGSFG 88
Query: 351 TTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLV 410
++ +E+ T +K+V + E+ M G S P +VP+ +
Sbjct: 89 EVHR--MEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS--PRIVPLYGAVREGPWVNIF 144
Query: 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIHAAVGGKFILGNIKSS 469
+ +E GS L+ + G P E R LG A +G+ ++H+ + + G++K+
Sbjct: 145 MELLEGGSLGQLV---KEQGCLP---EDRALYYLGQALEGLEYLHSR---RILHGDVKAD 195
Query: 470 NVLLSQD-LQGCISDFG----LTP------LMNTPTVPSRSAGYRAPEVIETKKPTQKSD 518
NVLLS D + DFG L P L+ +P + APEV+ + K D
Sbjct: 196 NVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET-HMAPEVVLGRSCDAKVD 254
Query: 519 VYSFGVLLLEMLTGKAP 535
V+S ++L ML G P
Sbjct: 255 VWSSCCMMLHMLNGCHP 271
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE-----QQMEVVGRLSQHPNVVP 396
E LG G+Y T YK + TT V LKEV + E +++ ++ L +H N+V
Sbjct: 11 EKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVR 67
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRV--KISLGSAKGIAHIH 454
+ ++++ LV++F++ + +R +G TP E + +G+A H
Sbjct: 68 LYDVIHTENKLTLVFEFMDNDLKKYM--DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--TVPSR--SAGYRAPEVIET 510
K + ++K N+L+++ Q + DFGL P T S + YRAP+V+
Sbjct: 126 E---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 511 KKPTQKS-DVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ S D++S G +L EM+TGK E+ + L
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL 220
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 37/281 (13%)
Query: 332 DLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ- 390
D E+L E +GKGS+G +K I VV ++ ++ + E E + + LSQ
Sbjct: 19 DPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 391 -HPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
P V Y KD KL ++ +++ GS LL PLD I K
Sbjct: 78 DSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILK 130
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG---YRA 504
G+ ++H+ K I +IK++NVLLS+ + ++DFG+ L +T + G + A
Sbjct: 131 GLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMA 187
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564
PEVI+ K+D++S G+ +E+ G+ P H ++ + +F
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPM-------------KVLF 229
Query: 565 DVELMRYENIEEEMVQML-QIAMSCVAKVPDMRPTMEEVVR 604
+ +E + L + +C+ K P RPT +E+++
Sbjct: 230 LIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 34/243 (13%)
Query: 311 SGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKE 370
S VQ+ +N + F +G D+ G GSY + I T + +K
Sbjct: 8 SIVQQLHRNSIQFTDGYEVKEDI-----------GVGSYSVCKRCI--HKATNMEFAVKI 54
Query: 371 VVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG 430
+ KR+ +++E++ R QHPN++ ++ Y D+ VY E LL I
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVY---DDGKYVYVVTELMKGGELLDK---IL 108
Query: 431 RTPLDWESRVKISLGS-AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC-----ISDF 484
R E L + K + ++HA + ++K SN+L D G I DF
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYV-DESGNPESIRICDF 164
Query: 485 GLTPLMNTPT----VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPG 540
G + P +A + APEV+E + D++S GVLL MLTG P A G
Sbjct: 165 GFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF-ANG 223
Query: 541 HED 543
+D
Sbjct: 224 PDD 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 45/299 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG---IGRTPLDW-------ESRVKISL 444
+ L+V +F + G+ S L R +TP D E + S
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR- 503
AKG+ + K I ++ + N+LLS+ I DFGL + R R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 504 -----APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVRE 557
APE I + T +SDV+SFGVLL E+ + G +P PG + + E
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------IDE 258
Query: 558 EWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
E+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 259 EFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 40/287 (13%)
Query: 326 GCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM-- 382
G + LED LGKG +G Y A ++ ++ +K L + + K E Q+
Sbjct: 4 GSKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 61
Query: 383 --EVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRV 440
E+ L +HPN++ + Y+ L+ ++ G+ L + D +
Sbjct: 62 EVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTA 115
Query: 441 KISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVP 496
A +++ H+ + I +IK N+LL + I+DFG + ++ P T
Sbjct: 116 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 170
Query: 497 SRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVR 556
+ Y PE+IE + +K D++S GVL E L GK P +A +++ + + R
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISR 224
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
E+T F E R +++ L + P RP + EV+
Sbjct: 225 VEFTFPDFVTEGAR------DLISRL------LKHNPSQRPMLREVL 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G L + D + A +++ H+
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYITELANALSYCHSK-- 132
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRXXLXGTLDYLPPEMIEGRM 187
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 239
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 240 ----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 37/283 (13%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS 389
+ D E+L E +GKGS+G +K I VV ++ ++ + E E + + LS
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 390 Q--HPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS 446
Q P V Y KD KL ++ +++ GS LL PLD I
Sbjct: 61 QCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREI 113
Query: 447 AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG---Y 502
KG+ ++H+ K I +IK++NVLLS+ + ++DFG+ L +T + G +
Sbjct: 114 LKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 170
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL-PRWVQSVVREEWTS 561
APEVI+ K+D++S G+ +E+ G+ P V+ L P+ + ++
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 230
Query: 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604
+ +E V+ +C+ K P RPT +E+++
Sbjct: 231 PL------------KEFVE------ACLNKEPSFRPTAKELLK 255
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 75
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 131
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 132 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
K + SDV+SFGV+L E+ T ++P E
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 222
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 76
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 129
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I++FG + ++ P T + Y PE+IE +
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 186
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 236
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR----MIEDIRPSDSENQPSS 620
+++ L + P RP + EV+ +PS+ +N+ S+
Sbjct: 237 --DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 278
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 81
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 137
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 138 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 225
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 37/283 (13%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS 389
+ D E+L E +GKGS+G +K I VV ++ ++ + E E + + LS
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 390 Q--HPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS 446
Q P V Y KD KL ++ +++ GS LL PLD I
Sbjct: 61 QCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREI 113
Query: 447 AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG---Y 502
KG+ ++H+ K I +IK++NVLLS+ + ++DFG+ L +T + G +
Sbjct: 114 LKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW 170
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL-PRWVQSVVREEWTS 561
APEVI+ K+D++S G+ +E+ G+ P V+ L P+ + ++
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 230
Query: 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604
+ +E V+ +C+ K P RPT +E+++
Sbjct: 231 PL------------KEFVE------ACLNKEPSFRPTAKELLK 255
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 44/298 (14%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG---------IGRTPLDWESRVKISLG 445
+ L+V +F + G+ S L R + + L E + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR-- 503
AKG+ + + K I ++ + N+LLS+ I DFGL + R R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 504 ----APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558
APE I + T +SDV+SFGVLL E+ + G +P PG + + EE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------IDEE 259
Query: 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 260 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 28/214 (13%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNV 394
++ + +V+G GS+G ++A L E V +K+ V+ + F+ + + R+ +HPNV
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKK----VLQDKRFKNRELQIMRIVKHPNV 94
Query: 395 VPIRAYYFS----KDEKL--LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-A 447
V ++A+++S KDE LV +++ + A H + P+ +K+ +
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL---IKLYMYQLL 151
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLM-----NTPTVPSRSA 500
+ +A+IH ++G +IK N+LL G + DFG ++ N + SR
Sbjct: 152 RSLAYIH-SIG--ICHRDIKPQNLLLDPP-SGVLKLIDFGSAKILIAGEPNVSXICSRY- 206
Query: 501 GYRAPEVI-ETKKPTQKSDVYSFGVLLLEMLTGK 533
YRAPE+I T D++S G ++ E++ G+
Sbjct: 207 -YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 132
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 132
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 42/286 (14%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG-------IGRTPLDWESRVKISLGSA 447
+ L+V +F + G+ S L R + + L E + S A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG----- 501
KG+ + + K I ++ + N+LLS+ I DFGL + P +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWT 560
+ APE I + T +SDV+SFGVLL E+ + G +P PG + + EE+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------IDEEFX 257
Query: 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
+ + MR + +M Q + C P RPT E+V +
Sbjct: 258 RRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 80
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 136
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 137 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
K + SDV+SFGV+L E+ T ++P E
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 227
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 135
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 82
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 138
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 139 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 226
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 94
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 150
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 42/289 (14%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG-------IGRTPLDWESRVKISLGSA 447
+ L+V +F + G+ S L R + + L E + S A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG----- 501
KG+ + + K I ++ + N+LLS+ I DFGL + P +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWT 560
+ APE I + T +SDV+SFGVLL E+ + G +P PG + + EE+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------IDEEFC 257
Query: 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ + MR + +M Q + C P RPT E+V + ++
Sbjct: 258 RRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 74
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
+ +S + L+ +++ GS L H R L + S++ KG+ ++
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL 128
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPE 506
++I ++ + N+L+ + + I DFGLT ++ + + G + APE
Sbjct: 129 GTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ K + SDV+SFGV+L E+ T ++P
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 83
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 139
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 140 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G +G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 268
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 269 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G +G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 271
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 272 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 132
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 73
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 74 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 126
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 127 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 183
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 233
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 234 --DLISRL------LKHNPSQRPMLREVL 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G +G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 266
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 267 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 107
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 163
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 164 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
K + SDV+SFGV+L E+ T ++P E
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 254
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPI 397
LGKG++G+ Y + + G V VK+L+ R+FE+++E++ L QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 94
Query: 398 RAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +S + L+ +++ GS L ++ +D ++ + KG+ ++
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT 150
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEVI 508
++I ++ + N+L+ + + I DFGLT ++ + + G + APE +
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
K + SDV+SFGV+L E+ T ++P
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 343 VLGKGSYGTTYKA-ILEEGTTVVVKRLK-EVVMGKREFEQQMEVVGRLS--QHPNVVPIR 398
LG GS+G + G +K LK E+V+ ++ E + LS HP ++ +
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+ + ++ D+IE G +LL ++ P+ ++ L + ++H+
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP-NPVAKFYAAEVCLA----LEYLHSK-- 125
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETKKPTQ 515
I ++K N+LL ++ I+DFG + P V G Y APEV+ TK +
Sbjct: 126 -DIIYRDLKPENILLDKNGHIKITDFGFAKYV--PDVTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 516 KSDVYSFGVLLLEMLTGKAPI 536
D +SFG+L+ EML G P
Sbjct: 183 SIDWWSFGILIYEMLAGYTPF 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 38/269 (14%)
Query: 344 LGKGSYGTTYKAILEE-----GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ V+ K E + + +++E+ L +HPN++ +
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 71
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 124
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 125 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 181
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 231
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 232 --DLISRL------LKHNPSQRPMLREVL 252
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 237
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 238 --DLISRL------LKHNPSQRPMLREVL 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 127
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I+DFG + ++ P T + Y PE+IE +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMHD 184
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 234
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 235 --DLISRL------LKHNPSQRPMLREVL 255
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 344 LGKGSYGTTYKA-ILEEGTTVVVKRL--------KEVVMGKREFEQQMEVVGRLSQHPNV 394
+GKG +G +K ++++ + V +K L E++ +EF++++ ++ L+ HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNI 85
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
V + Y + +V +F+ G + LL P+ W ++++ L A GI ++
Sbjct: 86 V--KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYM 138
Query: 454 HAAVGGKFILGNIKSSNVLLS---QDLQGC--ISDFGLTPLMNTPTVPSRSA-----GYR 503
+ +++S N+ L ++ C ++DFGL+ +V S S +
Sbjct: 139 QNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGLLGNFQWM 193
Query: 504 APEVI--ETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
APE I E + T+K+D YSF ++L +LTG+ P
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 42/271 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRDDLCGTLDYLPPEMIEGRM 185
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 237
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 238 ----DLISRL------LKHNPSQRPMLREVL 258
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G +G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 325
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 326 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR 503
AKG+ + + K I ++ + N+LLS+ I DFGL + R R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 504 ------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 257
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 170
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 171 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 271
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 272 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 396 PIRAYYFSKDEKLLVY-DFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR 503
AKG+ + K I ++ + N+LLS+ I DFGL + R R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 504 ------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 248
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ + G+ L R I R P + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 55/303 (18%)
Query: 341 AEVLGKGSYGTTYKAILEE------GTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHP 392
+ LG+G +G KA TTV VK LKE R+ + V+ +++ HP
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESRVK 441
+V+ + LL+ ++ + GS L +R +G + LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 442 ISLGS--------AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNT 492
+++G ++G+ ++ K + ++ + N+L+++ + ISDFGL+ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
+ RS G + A E + T +SDV+SFGVLL E++T G P E + +
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
L +++ R E R +N EEM +++ + C + PD RP ++ + +
Sbjct: 264 L---LKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 607 EDI 609
E +
Sbjct: 307 EKM 309
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 169
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 170 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 270
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 271 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 143
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 144 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 244
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 245 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 42/271 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 127
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRXXLCGTLDYLPPEMIEGRM 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREVL 255
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 150
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 251
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR 503
AKG+ + + K I ++ + N+LLS+ I DFGL + R R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 504 ------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 257
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR 503
AKG+ + K I ++ + N+LLS+ I DFGL + R R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 504 ------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 248
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ K + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ + G+ L R I R P + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 55/303 (18%)
Query: 341 AEVLGKGSYGTTYKAILEE------GTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHP 392
+ LG+G +G KA TTV VK LKE R+ + V+ +++ HP
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESRVK 441
+V+ + LL+ ++ + GS L +R +G + LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 442 ISLGS--------AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNT 492
+++G ++G+ ++ K + ++ + N+L+++ + ISDFGL+ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
+ RS G + A E + T +SDV+SFGVLL E++T G P E + +
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
L +++ R E R +N EEM +++ + C + PD RP ++ + +
Sbjct: 264 L---LKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 607 EDI 609
E +
Sbjct: 307 EKM 309
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 342 EVLGKGSYGTTYKA-ILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS-QHPNVVPI-- 397
EV +G +G +KA +L E V + +++ K+ ++ + EV +H N++
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 398 -RAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
S D L L+ F E GS S L N + W I+ A+G+A++H
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHE 139
Query: 456 AVGG-------KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------Y 502
+ G +IKS NVLL +L CI+DFGL + G Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 503 RAPEVIETKKPTQKS-----DVYSFGVLLLEMLTGKAPIQAP 539
APEV+E Q+ D+Y+ G++L E+ + P
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 151
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 252
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 27/216 (12%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKE-VVMGKREFEQQMEVVGRLSQHPNVVP 396
LG+G++G + A ++ V VK LK+ + +++F+++ E++ L QH ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHIVK 81
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESR-VKISLGSAKGIAHIHA 455
D ++V+++++ G + L + +D + R K LG ++ + HI +
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ-MLHIAS 140
Query: 456 AVGG--------KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRA--- 504
+ F+ ++ + N L+ +L I DFG++ + + T R G+
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS-TDYYRVGGHTMLPI 199
Query: 505 ----PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
PE I +K T +SDV+SFGV+L E+ T GK P
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 42/271 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIETKK 512
+ I +IK N+LL + I+DFG + ++ P+ SR + Y PE+IE +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPS--SRRXXLCGTLDYLPPEMIEGRM 185
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 237
Query: 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 238 ----DLISRL------LKHNPSQRPMLREVL 258
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 396 PIRAYYFSKDEKLLVY-DFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG- 501
AKG+ + + K I ++ + N+LLS+ I DFGL + P +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 502 ----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
+ APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 248
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 148
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 149 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 249
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 250 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 126/294 (42%), Gaps = 48/294 (16%)
Query: 344 LGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHPN 393
LG+G++G A +E TV VK LK+ + + +ME++ + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR--------GIGRTP---LDWESRVKI 442
++ + ++ ++ G+ L R I R P + ++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGY 502
+ A+G+ ++ + K I ++ + NVL++++ I+DFGL +N ++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 503 R------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVV 555
R APE + + T +SDV+SFGVL+ E+ T G +P E++ L + +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD 279
Query: 556 REEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
+ N E+ M++ C VP RPT +++V ++ I
Sbjct: 280 KP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 149
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 150 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 250
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 332 DLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQH 391
D E+L E +GKGS+G +K I VV ++ ++ + E E + + LSQ
Sbjct: 20 DPEELF-TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 392 PNVVPIRAY--YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-K 448
+ + Y Y + ++ +++ GS LL P D E ++ L K
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG------PFD-EFQIATMLKEILK 131
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG---YRA 504
G+ ++H+ K I +IK++NVLLS+ ++DFG+ L +T + G + A
Sbjct: 132 GLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 188
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAP 535
PEVI+ K+D++S G+ +E+ G+ P
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 146
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 147 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 247
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 43/217 (19%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG +G ++ G V VK +E RE E V+ R H N++
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG--- 62
Query: 400 YYFSKDEK--------LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+ + D K LV D+ E GS L+ R + E +K++L +A G+A
Sbjct: 63 -FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLA 115
Query: 452 HIHAAVGG-----KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----VPSRSAG 501
H+H + G ++KS N+L+ ++ CI+D GL ++ T P+ G
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 175
Query: 502 ---YRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ + +++D+Y+ G++ E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG- 501
AKG+ + + K I ++ + N+LLS+ I DFGL + P +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 502 ----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
+ APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 257
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 150
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 251
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 43/217 (19%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG +G ++ G V VK +E RE E V+ R H N++
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG--- 61
Query: 400 YYFSKDEK--------LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+ + D K LV D+ E GS L+ R + E +K++L +A G+A
Sbjct: 62 -FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLA 114
Query: 452 HIHAAVGG-----KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----VPSRSAG 501
H+H + G ++KS N+L+ ++ CI+D GL ++ T P+ G
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 502 ---YRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ + +++D+Y+ G++ E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 396 PIRAYYFSKDEKLLVY-DFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG- 501
AKG+ + K I ++ + N+LLS+ I DFGL + P +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 502 ----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
+ APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 248
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG- 501
AKG+ + + K I ++ + N+LLS+ I DFGL + P +
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 502 ----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
+ APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 294
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 352
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 46/300 (15%)
Query: 344 LGKGSYGTTYKA----ILEEGT--TVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
LG+G++G +A I + T TV VK LKE R +++++ + H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 396 PIRAYYFSKDEKLLV-YDFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKIS 443
+ L+V +F + G+ S L R + + L E + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG- 501
AKG+ + + K I ++ + N+LLS+ I DFGL + P +
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 502 ----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
+ APE I + T +SDV+SFGVLL E+ + G +P PG + +
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK------------ID 259
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616
EE+ + + MR + +M Q + C P RPT E+V + ++ ++++
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 317
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ ++ +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 151
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 252
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG YG ++ + G V VK ++ RE E V+ R H N++ A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGFIA 98
Query: 400 Y----YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
S + L+ + E GS L T LD S ++I L A G+AH+H
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 456 AVGGK-----FILGNIKSSNVLLSQDLQGCISDFGLTPLM----------NTPTVPSRSA 500
+ G ++KS N+L+ ++ Q CI+D GL + N P V ++
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR- 211
Query: 501 GYRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ ++ D+++FG++L E+
Sbjct: 212 -YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 341 AEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVV 395
+G+G +G ++ I V +K K RE Q + R HP++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIET 510
+F+ +I + NVL+S + + DFGL+ M T S G + APE I
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINF 186
Query: 511 KKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
++ T SDV+ FGV + E+L G P Q + DV+
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 43/217 (19%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG +G ++ G V VK +E RE E V+ R H N++
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG--- 64
Query: 400 YYFSKDEK--------LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+ + D K LV D+ E GS L+ R + E +K++L +A G+A
Sbjct: 65 -FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLA 117
Query: 452 HIHAAVGG-----KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----VPSRSAG 501
H+H + G ++KS N+L+ ++ CI+D GL ++ T P+ G
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 177
Query: 502 ---YRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ + +++D+Y+ G++ E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG YG ++ + G V VK ++ RE E V+ R H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGFIA 69
Query: 400 Y----YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
S + L+ + E GS L T LD S ++I L A G+AH+H
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 456 AVGGK-----FILGNIKSSNVLLSQDLQGCISDFGLTPLM----------NTPTVPSRSA 500
+ G ++KS N+L+ ++ Q CI+D GL + N P V ++
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR- 182
Query: 501 GYRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ ++ D+++FG++L E+
Sbjct: 183 -YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 43/217 (19%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG +G ++ G V VK +E RE E V+ R H N++
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG--- 67
Query: 400 YYFSKDEK--------LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+ + D K LV D+ E GS L+ R + E +K++L +A G+A
Sbjct: 68 -FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLA 120
Query: 452 HIHAAVGG-----KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----VPSRSAG 501
H+H + G ++KS N+L+ ++ CI+D GL ++ T P+ G
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 180
Query: 502 ---YRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ + +++D+Y+ G++ E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 341 AEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVV 395
+G+G +G ++ I V +K K RE Q + R HP++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 129
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIET 510
+F+ +I + NVL+S + + DFGL+ M T S G + APE I
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 511 KKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
++ T SDV+ FGV + E+L G P Q + DV+
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
LG+G++G + A ++ V VK LK+ +++F ++ E++ L QH ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVK 79
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALL--HGNRGI----GRTP--LDWESRVKISLGSAK 448
D ++V+++++ G + L HG + G P L + I+ A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRA---- 504
G+ ++ + F+ ++ + N L+ ++L I DFG++ + + T R G+
Sbjct: 140 GMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS-TDYYRVGGHTMLPIR 195
Query: 505 ---PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
PE I +K T +SDV+S GV+L E+ T GK P + +V++
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 241
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 43/217 (19%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG +G ++ G V VK +E RE E V+ R H N++
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG--- 87
Query: 400 YYFSKDEK--------LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+ + D K LV D+ E GS L+ R + E +K++L +A G+A
Sbjct: 88 -FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLA 140
Query: 452 HIHAAVGG-----KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----VPSRSAG 501
H+H + G ++KS N+L+ ++ CI+D GL ++ T P+ G
Sbjct: 141 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 200
Query: 502 ---YRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ + +++D+Y+ G++ E+
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 43/217 (19%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG +G ++ G V VK +E RE E V+ R H N++
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG--- 100
Query: 400 YYFSKDEK--------LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+ + D K LV D+ E GS L+ R + E +K++L +A G+A
Sbjct: 101 -FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLA 153
Query: 452 HIHAAVGG-----KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----VPSRSAG 501
H+H + G ++KS N+L+ ++ CI+D GL ++ T P+ G
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 213
Query: 502 ---YRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ + +++D+Y+ G++ E+
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
E +GKG YG ++ + G V VK ++ RE E V+ R H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGFIA 69
Query: 400 Y----YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
S + L+ + E GS L T LD S ++I L A G+AH+H
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 456 AVGGK-----FILGNIKSSNVLLSQDLQGCISDFGLTPLM----------NTPTVPSRSA 500
+ G ++KS N+L+ ++ Q CI+D GL + N P V ++
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR- 182
Query: 501 GYRAPEVIETK------KPTQKSDVYSFGVLLLEM 529
Y APEV++ ++ D+++FG++L E+
Sbjct: 183 -YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 326 GCSYNFDLEDLLRASAEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQ 380
G + +++++ +G+G +G ++ I V +K K RE
Sbjct: 3 GSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 62
Query: 381 QMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRV 440
Q + R HP++V + +++ ++ + G + L + + LD S +
Sbjct: 63 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLI 117
Query: 441 KISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA 500
+ + +A++ + +F+ +I + NVL+S + + DFGL+ M T S
Sbjct: 118 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 501 G-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
G + APE I ++ T SDV+ FGV + E+L G P Q + DV+
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS--QHPNVVPIRAYY 401
LG G++G YKA +E + ++ E + E E + + L+ HP +V + Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIET-KSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 402 FSKDEKLLVYDFIEAGSFSA-LLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+ + ++ +F G+ A +L +RG+ + R + + + +H+ +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---R 129
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVI--ETKKP 513
I ++K+ NVL++ + ++DFG++ N T+ R + + APEV+ ET K
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 514 T---QKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
T K+D++S G+ L+EM A I+ P HE
Sbjct: 189 TPYDYKADIWSLGITLIEM----AQIEPPHHE 216
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 341 AEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVV 395
+G+G +G ++ I V +K K RE Q + R HP++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 129
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIET 510
+F+ +I + NVL+S + + DFGL+ M T S G + APE I
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 511 KKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
++ T SDV+ FGV + E+L G P Q + DV+
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 29/212 (13%)
Query: 344 LGKGSYGTTYKA-ILEEGTTVVVKRL--------KEVVMGKREFEQQMEVVGRLSQHPNV 394
+GKG +G +K ++++ + V +K L E++ +EF++++ ++ L+ HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNI 85
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
V + Y + +V +F+ G + LL P+ W ++++ L A GI ++
Sbjct: 86 V--KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYM 138
Query: 454 HAAVGGKFILGNIKSSNVLL---SQDLQGC--ISDFGLTPLMNTPTVPSRSAGYR--APE 506
+ +++S N+ L ++ C ++DFG T + +V ++ APE
Sbjct: 139 QNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-TSQQSVHSVSGLLGNFQWMAPE 196
Query: 507 VI--ETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
I E + T+K+D YSF ++L +LTG+ P
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM----EVVGRLSQHPNVVPIR 398
LGKG +G Y A ++ ++ +K L + + K E Q+ E+ L +HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
Y+ L+ ++ G+ L + D + A +++ H+
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKKPT 514
+ I +IK N+LL + I++FG + ++ P T + Y PE+IE +
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574
+K D++S GVL E L GK P +A +++ + + R E+T F E R
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 237
Query: 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+++ L + P RP + EV+
Sbjct: 238 --DLISRL------LKHNPSQRPMLREVL 258
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 326 GCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM-- 382
G + LED LGKG +G Y A + ++ +K L + + K E Q+
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 383 --EVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRV 440
E+ L +HPN++ + Y+ L+ ++ G+ L + + R D +
Sbjct: 62 EVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSR--FDEQRTA 115
Query: 441 KISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVP 496
A +++ H+ + I +IK N+LL + + I+DFG + ++ P T
Sbjct: 116 TYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTL 170
Query: 497 SRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
+ Y PE+IE + +K D++S GVL E L G P +A +++
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS--QHPNVVPIRAYY 401
LG G++G YKA +E + ++ E + E E + + L+ HP +V + Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIET-KSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 402 FSKDEKLLVYDFIEAGSFSA-LLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+ + ++ +F G+ A +L +RG+ + +I + + + ++ +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGL--------TEPQIQVVCRQMLEALNFLHSKR 137
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-----GYRAPEVI--ETKKP 513
I ++K+ NVL++ + ++DFG++ N T+ R + + APEV+ ET K
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 514 T---QKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
T K+D++S G+ L+EM A I+ P HE
Sbjct: 197 TPYDYKADIWSLGITLIEM----AQIEPPHHE 224
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ + +
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 156
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 157 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 257
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 258 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 322 VFFEGC----SYNFDLEDLLRASAEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVM 373
++F+G + +++++ +G+G +G ++ I V +K K
Sbjct: 20 LYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS 79
Query: 374 GK-REFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
RE Q + R HP++V + +++ ++ + G + L + +
Sbjct: 80 DSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKY 134
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492
LD S + + + +A++ + +F+ +I + NVL+S + + DFGL+ M
Sbjct: 135 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 191
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T S G + APE I ++ T SDV+ FGV + E+L G P Q + DV+
Sbjct: 192 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 52/244 (21%)
Query: 344 LGKGSYGTTYKAI-LEEGTTVVVKRLKEVVM----GKREFEQQMEVVGRLSQHPNVVPIR 398
LGKG+YG +K+I G V VK++ + +R F + M ++ LS H N+V +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIM-ILTELSGHENIVNLL 75
Query: 399 AYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ +++ LV+D++E A++ N L+ + + K I ++H+
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHS- 127
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLT----------------------------P 488
G + ++K SN+LL+ + ++DFGL+ P
Sbjct: 128 --GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 489 LMNTPTVPSRSAGYRAPEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
++ T V +R YRAPE+ + + K T+ D++S G +L E+L GK PI PG + L
Sbjct: 186 IL-TDYVATR--WYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK-PI-FPGSSTMNQL 240
Query: 548 PRWV 551
R +
Sbjct: 241 ERII 244
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGKREFEQQMEVVGRLS-QHPNV 394
+VLG G++GT YK I + EG TV +K L E K E E + S HP++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIG-RTPLDWESRVKISLGSAKGIAH 452
V + S +L V + G +H ++ IG + L+W ++ AKG+ +
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 132
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP------E 506
+ + + ++ + NVL+ I+DFGL L+ + G + P E
Sbjct: 133 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
I +K T +SDV+S+GV + E++T G P ++ DL
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL 231
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 131/312 (41%), Gaps = 71/312 (22%)
Query: 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
E++G G +G +KA +G T V++R+K + E++++ + +L H N+V
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVK---YNNEKAEREVKALAKLD-HVNIVHYNGC 73
Query: 401 Y--FSKDEK---------------------------LLVYDFIEAGSFSALLHGNRGIGR 431
+ F D + + +F + G+ + RG
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--- 130
Query: 432 TPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491
LD +++ KG+ +IH+ K I ++K SN+ L Q I DFGL +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 492 TPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLP 548
+RS G Y +PE I ++ ++ D+Y+ G++L E+L V D
Sbjct: 188 NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH------------VCDTA 235
Query: 549 RWVQSV---VREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605
+R+ S++FD + E+ ++Q L ++K P+ RP E++R
Sbjct: 236 FETSKFFTDLRDGIISDIFDKK-------EKTLLQKL------LSKKPEDRPNTSEILRT 282
Query: 606 IEDIRPSDSENQ 617
+ + S +N+
Sbjct: 283 LTVWKKSPEKNE 294
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 344 LGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPIR 398
+G+G +G ++ I V +K K RE Q + R HP++V +
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESK-- 127
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+F+ +I + NVL+S + + DFGL+ M T S G + APE I ++
Sbjct: 128 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T SDV+ FGV + E+L G P Q + DV+
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 341 AEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVV 395
+G+G +G ++ I V +K K RE Q + R HP++V
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 80 KLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 134
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIET 510
+F+ +I + NVL+S + + DFGL+ M T S G + APE I
Sbjct: 135 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 191
Query: 511 KKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
++ T SDV+ FGV + E+L G P Q + DV+
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ + +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 210
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 211 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 311
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 312 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 34/241 (14%)
Query: 313 VQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVV 372
VQ+ +N + F +G D+ G GSY + I T +K +
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDI-----------GVGSYSVCKRCI--HKATNXEFAVKIID 56
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
KR+ +++E++ R QHPN++ ++ Y D+ VY E LL I R
Sbjct: 57 KSKRDPTEEIEILLRYGQHPNIITLKDVY---DDGKYVYVVTELXKGGELLDK---ILRQ 110
Query: 433 PLDWESRVKISLGS-AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC-----ISDFGL 486
E L + K + ++HA + ++K SN+L D G I DFG
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYV-DESGNPESIRICDFGF 166
Query: 487 TPLMNTPT----VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
+ P +A + APEV+E + D++S GVLL LTG P A G +
Sbjct: 167 AKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPD 225
Query: 543 D 543
D
Sbjct: 226 D 226
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ + +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 152
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 153 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 253
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 254 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 341 AEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVV 395
+G+G +G ++ I V +K K RE Q + R HP++V
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 77 KLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 131
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIET 510
+F+ +I + NVL+S + + DFGL+ M T S G + APE I
Sbjct: 132 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 188
Query: 511 KKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
++ T SDV+ FGV + E+L G P Q + DV+
Sbjct: 189 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ + +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 152
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 153 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 253
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 254 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ + +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 149
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 150 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 250
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ + +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 151
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 252
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E +G GSY + + T + +K + KR+ +++E++ R QHPN++ ++ Y
Sbjct: 33 ETIGVGSYSECKRCV--HKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHIHAAVGGK 460
LV + + G I R E L + K + ++H+
Sbjct: 91 DDGKHVYLVTELMRGGELL------DKILRQKFFSEREASFVLHTIGKTVEYLHSQ---G 141
Query: 461 FILGNIKSSNVLLSQDLQG---C--ISDFGLTPLMNTPT----VPSRSAGYRAPEVIETK 511
+ ++K SN+L D G C I DFG + P +A + APEV++ +
Sbjct: 142 VVHRDLKPSNILYV-DESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
+ D++S G+LL ML G P
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 342 EVLGKGSYGTTYKAIL--EEGTTV--VVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVP 396
EV+G+G +G Y L +G + VK L + +G+ ++ + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 397 IRAYYF-SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ S+ L+V +++ G + R P + + L AKG+ + +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 151
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--------NTPTVPSRSAGYRAPEV 507
KF+ ++ + N +L + ++DFGL M + T + A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
++T+K T KSDV+SFGVLL E++T AP + DV + V+ ++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDV------------NTFDITVYLLQ 252
Query: 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R E + ++ + C +MRP+ E+V I I
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 35/215 (16%)
Query: 344 LGKGSYGTTYKA-ILEEGTTVVVKRL--------KEVVMGKREFEQQMEVVGRLSQHPNV 394
+GKG +G +K ++++ + V +K L E++ +EF++++ ++ L+ HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNI 85
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
V + Y + +V +F+ G + LL P+ W ++++ L A GI ++
Sbjct: 86 V--KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYM 138
Query: 454 HAAVGGKFILGNIKSSNVLL---SQDLQGC--ISDFGLTPLMNTPTVPSRSA-----GYR 503
+ +++S N+ L ++ C ++DF L+ +V S S +
Sbjct: 139 QNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGLLGNFQWM 193
Query: 504 APEVI--ETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
APE I E + T+K+D YSF ++L +LTG+ P
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGKREFEQQMEVVGRLS-QHPNV 394
+VLG G++GT YK I + EG TV +K L E K E E + S HP++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIG-RTPLDWESRVKISLGSAKGIAH 452
V + S +L V + G +H ++ IG + L+W ++ AKG+ +
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 155
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP------E 506
+ + + ++ + NVL+ I+DFGL L+ + G + P E
Sbjct: 156 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
I +K T +SDV+S+GV + E++T G P ++ DL
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL 254
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVK-RLKEVVMGKRE-------FEQQMEVVGRLSQHPNVV 395
LG G T Y L E T + +K +K + + RE FE+++ +LS H N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIV 74
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
+ D LV ++IE + S + HG PL ++ + + GI H
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKHA 127
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRAPEVI 508
H + + +IK N+L+ + I DFG+ ++ ++ + Y +PE
Sbjct: 128 HDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAP 535
+ + + +D+YS G++L EML G+ P
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
E +G GSY + + T + +K + KR+ +++E++ R QHPN++ ++ Y
Sbjct: 33 ETIGVGSYSECKRCV--HKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHIHAAVGGK 460
LV + + G I R E L + K + ++H+
Sbjct: 91 DDGKHVYLVTELMRGGELLD------KILRQKFFSEREASFVLHTIGKTVEYLHSQ---G 141
Query: 461 FILGNIKSSNVLLSQDLQG---C--ISDFGLTPLMNTPT----VPSRSAGYRAPEVIETK 511
+ ++K SN+L D G C I DFG + P +A + APEV++ +
Sbjct: 142 VVHRDLKPSNILYV-DESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
+ D++S G+LL ML G P
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 55/303 (18%)
Query: 341 AEVLGKGSYGTTYKAILEE------GTTVVVKRLKEVVMGK--REFEQQMEVVGRLSQHP 392
+ LG+G +G KA TTV VK LKE R+ + V+ +++ HP
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESRVK 441
+V+ + LL+ ++ + GS L +R +G + LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 442 ISLGS--------AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNT 492
+++G ++G+ ++ + ++ + N+L+++ + ISDFGL+ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
+ RS G + A E + T +SDV+SFGVLL E++T G P E + +
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
L +++ R E R +N EEM +++ + C + PD RP ++ + +
Sbjct: 264 L---LKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 607 EDI 609
E +
Sbjct: 307 EKM 309
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 26/230 (11%)
Query: 326 GCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVV-VKRLKEVVMGKREFEQQM-- 382
G + LED LGKG +G Y A + ++ +K L + + K E Q+
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 383 --EVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRV 440
E+ L +HPN++ + Y+ L+ ++ G+ L + + R D +
Sbjct: 62 EVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSR--FDEQRTA 115
Query: 441 KISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-- 498
A +++ H+ + I +IK N+LL + + I+DFG + ++ P+ SR
Sbjct: 116 TYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPS--SRRD 168
Query: 499 ----SAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
+ Y PE+IE + +K D++S GVL E L G P +A +++
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 43/232 (18%)
Query: 333 LEDLLRASAEVLGKGSYGTTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQ 390
ED+ + ++E+LG+G+Y A+ L+ G VK + K+ + +++E + +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA--- 447
+ N++ + ++ LV++ ++ GS A + + SRV + +A
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREA---SRVVRDVAAALDF 126
Query: 448 ---KGIAHIHAAVGGKFILGNIKSSNVLLS-----QDLQGCISDFG--------LTPLMN 491
KGIAH ++K N+L ++ C D G TP+
Sbjct: 127 LHTKGIAH-----------RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPI-T 174
Query: 492 TP--TVPSRSAGYRAPEVIE--TKKPT---QKSDVYSFGVLLLEMLTGKAPI 536
TP T P SA Y APEV+E T + T ++ D++S GV+L ML+G P
Sbjct: 175 TPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ ++ H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKVVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S GV++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHID 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 33/217 (15%)
Query: 344 LGKGSYGTTYKAIL-EEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+G G+YG A+ G V +K+L + + KR + +++ ++ + +H NV+ +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHM-RHENVIGLL 90
Query: 399 AYYFSKDEKL-------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGI 450
F+ DE L LV F+ + H G E R++ + KG+
Sbjct: 91 DV-FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG--------EDRIQFLVYQMLKGL 141
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---TVPSRSAGYRAPEV 507
+IHAA I ++K N+ +++D + I DFGL ++ V +R YRAPEV
Sbjct: 142 RYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR--WYRAPEV 196
Query: 508 I-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
I + TQ D++S G ++ EM+TGK + H D
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 344 LGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPIR 398
+G+G +G ++ I V +K K RE Q + R HP++V +
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLESK-- 510
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+F+ +I + NVL+S + + DFGL+ M T S G + APE I ++
Sbjct: 511 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T SDV+ FGV + E+L G P Q + DV+
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ ++ H N++
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKVVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S GV++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHID 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 341 AEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVV 395
+G+G +G ++ I V +K K RE Q + R HP++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ +++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 75 KLIGV-ITENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIET 510
+F+ +I + NVL+S + DFGL+ M T S G + APE I
Sbjct: 130 K---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 511 KKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
++ T SDV+ FGV + E+L G P Q + DV+
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 132/302 (43%), Gaps = 63/302 (20%)
Query: 344 LGKGSYGTTYKAI------LEEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVV 395
+G+G++G ++A E T V VK LKE + +F+++ ++ +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIV 113
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALL------------HGNRGI-------GRTPLDW 436
+ L+++++ G + L H + G PL
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 437 ESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493
++ I+ A G+A++ KF+ ++ + N L+ +++ I+DFGL+ + +
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 494 ------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
+P R + PE I + T +SDV+++GV+L E+ + G P HE+V+
Sbjct: 231 KADGNDAIPIR---WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 287
Query: 547 LPRWVQSVVREEWTSEVFDVELMRY-ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605
R D ++ EN E+ ++++ C +K+P RP+ + R+
Sbjct: 288 YVR---------------DGNILACPENCPLELYNLMRL---CWSKLPADRPSFCSIHRI 329
Query: 606 IE 607
++
Sbjct: 330 LQ 331
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 44/294 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 76
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-------YR 503
A+++A KF+ ++ + N ++++D I DFG+T + T R G +
Sbjct: 137 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPVRWM 192
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
+PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GG 242
Query: 563 VFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
+ D + +N + +++++++ C P MRP+ E++ I E++ P E
Sbjct: 243 LLD----KPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 289
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 43/279 (15%)
Query: 341 AEVLGKGSYGTTYKAIL--EEGTT--VVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNV 394
++LG+G +G+ + L E+GT+ V VK +K +RE E+ + + HPNV
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 395 VPIRAYYFSKDEK-----LLVYDFIEAGSF-SALLHGNRGIGRTPLDWESRVKISLGSAK 448
+ + + +++ F++ G + LL+ G + ++ +K + A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT------VPSRSAGY 502
G+ ++ F+ ++ + N +L D+ C++DFGL+ + + + +
Sbjct: 159 GMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTS 561
A E + + T KSDV++FGV + E+ T G P PG ++
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY--PGVQN-----------------H 256
Query: 562 EVFDVEL--MRYENIEEEMVQMLQIAMSCVAKVPDMRPT 598
E++D L R + E+ + ++ +I SC P RPT
Sbjct: 257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPT 295
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 81
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPL----DWESRVKISLGSAKGI 450
+ L++ + + G + L R + P+ ++++ A G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N ++++D I DFG+T + T G + +
Sbjct: 142 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 248
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 249 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 294
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 91
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPL----DWESRVKISLGSAKGI 450
+ L++ + + G + L R + P+ ++++ A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N ++++D I DFG+T + T G + +
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 258
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 259 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 304
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 144/331 (43%), Gaps = 45/331 (13%)
Query: 309 FGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEV---LGKGSYGTTYKAIL------EE 359
G+GV A N F Y D ++ R + LG+GS+G Y+ + E
Sbjct: 17 LGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEP 76
Query: 360 GTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417
T V +K + E M +R EF + V+ + H +VV + L++ + + G
Sbjct: 77 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 418 SFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVL 472
+ L R P ++++ A G+A+++A KF+ ++ + N +
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 192
Query: 473 LSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLL 526
+++D I DFG+T + T G + +PE ++ T SDV+SFGV+L
Sbjct: 193 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 252
Query: 527 LEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIA 585
E+ T + P Q +E V+ R+V + D + +N + + +++++
Sbjct: 253 WEIATLAEQPYQGLSNEQVL---RFVME-------GGLLD----KPDNCPDMLFELMRM- 297
Query: 586 MSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
C P MRP+ E++ I E++ P E
Sbjct: 298 --CWQYNPKMRPSFLEIISSIKEEMEPGFRE 326
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQ 390
EDL+ E +G+G++G + L + T V VK +E + K +F Q+ ++ + S
Sbjct: 114 EDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS- 170
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
HPN+V + K +V + ++ G F L R ++ +++ +A G+
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGM 226
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR------- 503
++ + I ++ + N L+++ ISDFG++ V + S G R
Sbjct: 227 EYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMS-REEADGVXAASGGLRQVPVKWT 282
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
APE + + + +SDV+SFG+LL E + G +P
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPIRAYY 401
+GKGS+G YK I VV ++ ++ + E E + + LSQ P + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKF 461
+ ++ +++ GS LL PL+ I KG+ ++H+ +
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPG------PLEETYIATILREILKGLDYLHSE---RK 137
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG---YRAPEVIETKKPTQKS 517
I +IK++NVLLS+ ++DFG+ L +T + G + APEVI+ K+
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 518 DVYSFGVLLLEMLTGKAP 535
D++S G+ +E+ G+ P
Sbjct: 198 DIWSLGITAIELAKGEPP 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 326 GCSYNFDLEDLLRASAEVLGKGSYGTTYKAIL----EEGTTVVVKRLKE--VVMGKREFE 379
G S+ ++E +++G G G L + V +K LK +R+F
Sbjct: 39 GRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL 98
Query: 380 QQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESR 439
+ ++G+ HPN++ + ++V +++E GS L + G +
Sbjct: 99 SEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--------QFT 149
Query: 440 VKISLGSAKGI-AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPS 497
+ +G +G+ A + ++ ++ + NVL+ +L +SDFGL+ ++ + P
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 498 RSAG------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
+ G + APE I + + SDV+SFGV++ E+L G+ P + DV+
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 130/280 (46%), Gaps = 32/280 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 91
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 92 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 144
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPERLQGTHYSVQ 202
Query: 517 SDVYSFGVLLLEMLTGKAPI-QAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575
SD++S G+ L+EM G+ PI G + +L ++ + + S VF +E + N
Sbjct: 203 SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN-- 260
Query: 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSE 615
C+ K P R +++++ + I+ SD+E
Sbjct: 261 -----------KCLIKNPAERADLKQLM-VHAFIKRSDAE 288
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 132/294 (44%), Gaps = 44/294 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 85
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-------YR 503
A+++A KF+ ++ + N ++++D I DFG+T + T R G +
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPVRWM 201
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
+PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GG 251
Query: 563 VFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
+ D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 252 LLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 298
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 344 LGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPNVVPIR 398
+G+G +G ++ I V +K K RE Q + R HP++V +
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+++ ++ + G + L + + LD S + + + +A++ +
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLESK-- 510
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETKKP 513
+F+ +I + NVL+S + DFGL+ M T S G + APE I ++
Sbjct: 511 -RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 514 TQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T SDV+ FGV + E+L G P Q + DV+
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 326 GCSYNFDLEDLLRASAEVLGKGSYGTTYKAIL----EEGTTVVVKRLKE--VVMGKREFE 379
G S+ ++E +++G G G L + V +K LK +R+F
Sbjct: 39 GRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL 98
Query: 380 QQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESR 439
+ ++G+ HPN++ + ++V +++E GS L + G +
Sbjct: 99 SEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--------QFT 149
Query: 440 VKISLGSAKGI-AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM-NTPTVPS 497
+ +G +G+ A + ++ ++ + NVL+ +L +SDFGL+ ++ + P
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 498 RSAG------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
+ G + APE I + + SDV+SFGV++ E+L G+ P + DV+
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQ 390
EDL+ E +G+G++G + L + T V VK +E + K +F Q+ ++ + S
Sbjct: 114 EDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS- 170
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
HPN+V + K +V + ++ G F L R ++ +++ +A G+
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGM 226
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR------- 503
++ + I ++ + N L+++ ISDFG++ V + S G R
Sbjct: 227 EYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMS-REEADGVYAASGGLRQVPVKWT 282
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
APE + + + +SDV+SFG+LL E + G +P
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 38/265 (14%)
Query: 284 LKKKDSEGTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEV 343
L K S G+A + G P+ + GV EK K V Y + E
Sbjct: 30 LAKTWSSGSAKLQRLG-----PETEDNEGVLLTEKLKPV-----DYEYREEVHWMTHQPR 79
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
LG+GS+G ++ ++ G VK+++ V E+ + G S P +VP+
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSS--PRIVPLYGAVR 134
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIHAAVGGKF 461
+ + +E GS L+ + +G P E R LG A +G+ ++H +
Sbjct: 135 EGPWVNIFMELLEGGSLGQLI---KQMGCLP---EDRALYYLGQALEGLEYLHTR---RI 185
Query: 462 ILGNIKSSNVLLSQD-LQGCISDFG----LTP------LMNTPTVPSRSAGYRAPEVIET 510
+ G++K+ NVLLS D + + DFG L P L+ +P + APEV+
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-HMAPEVVMG 244
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAP 535
K K D++S ++L ML G P
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 125
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPERLQGTHYSVQ 183
Query: 517 SDVYSFGVLLLEMLTGKAPIQAP-GHED------VVDLPRWVQSVVREEWTSEVFDVELM 569
SD++S G+ L+EM G+ PI P ED + +L ++ + + S VF +E
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 243
Query: 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSE 615
+ N C+ K P R +++++ + I+ SD+E
Sbjct: 244 DFVN-------------KCLIKNPAERADLKQLM-VHAFIKRSDAE 275
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 125
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPERLQGTHYSVQ 183
Query: 517 SDVYSFGVLLLEMLTGKAPIQAP 539
SD++S G+ L+EM G+ PI P
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 125
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPERLQGTHYSVQ 183
Query: 517 SDVYSFGVLLLEMLTGKAPIQAP 539
SD++S G+ L+EM G+ PI P
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 125
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPERLQGTHYSVQ 183
Query: 517 SDVYSFGVLLLEMLTGKAPIQAP 539
SD++S G+ L+EM G+ PI P
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 72
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 125
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPERLQGTHYSVQ 183
Query: 517 SDVYSFGVLLLEMLTGKAPIQAP 539
SD++S G+ L+EM G+ PI P
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 78
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N ++++D I DFG+T + T G + +
Sbjct: 139 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 245
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 246 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 291
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ ++ H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKVVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 84
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N ++++D I DFG+T + T G + +
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 251
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 252 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 297
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 36 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L R G L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 266
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 267 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 VFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQ 381
VF E NFD ++LRA +GKGS+G I+++ T + +K M K++ ++
Sbjct: 5 VFDENEDVNFDHFEILRA----IGKGSFGKV--CIVQKNDTKKMYAMK--YMNKQKCVER 56
Query: 382 MEVVGRLSQ--------HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP 433
EV + HP +V + + +++ +V D + G L N
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK--- 113
Query: 434 LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493
E VK+ + + + + + I ++K N+LL + I+DF + ++
Sbjct: 114 ---EETVKLFI--CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168
Query: 494 TVPSRSAG---YRAPEVIETKKPTQKS---DVYSFGVLLLEMLTGKAP 535
T + AG Y APE+ ++K S D +S GV E+L G+ P
Sbjct: 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 77 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L R G L +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 194 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 307
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 308 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 91
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N ++++D I DFG+T + T G + +
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 258
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 259 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 304
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 85
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N ++++D I DFG+T + T G + +
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 252
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 253 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 298
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 82
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N ++++D I DFG+T + T G + +
Sbjct: 143 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 249
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 250 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 295
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ ++ H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKVVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 99
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 152
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPERLQGTHYSVQ 210
Query: 517 SDVYSFGVLLLEMLTGKAPIQAP 539
SD++S G+ L+EM G+ PI P
Sbjct: 211 SDIWSMGLSLVEMAVGRYPIPPP 233
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 134
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 187
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPERLQGTHYSVQ 245
Query: 517 SDVYSFGVLLLEMLTGKAPIQAP 539
SD++S G+ L+EM G+ PI P
Sbjct: 246 SDIWSMGLSLVEMAVGRYPIPPP 268
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 21 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L R G L +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 138 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 251
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 252 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 84
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N ++++D I DFG+T + T G + +
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 251
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + + +++++ C P MRP+ E++ I E++ P E
Sbjct: 252 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 297
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 36 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L R G L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 266
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 267 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ TT A L +K L++ + K ++ +V+ RL HP V
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 93
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 94 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 145
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 249
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 45/233 (19%)
Query: 337 LRASAEVLGKGSYGTTYKAILEEGTTVVVKRLK----EVVMGKREFEQQMEVVGRLSQHP 392
L S ++LG GS GT +G V VKR+ ++ + +++++ HP
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 87
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSAL-LHGNRGIGRTPLDWESRVK-ISL--GSAK 448
NV+ YY S+ +Y +E + + L ++ + L + ISL A
Sbjct: 88 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLS-------------QDLQGCISDFGLTPLMNTPTV 495
G+AH+H+ K I ++K N+L+S ++L+ ISDFGL +++
Sbjct: 145 GVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 496 --------PSRSAGYRAPEVIE---TKKPTQKSDVYSFGVLLLEMLT-GKAPI 536
PS ++G+RAPE++E ++ T+ D++S G + +L+ GK P
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 36 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L R G L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 266
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 267 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 343 VLGKGSYGTTYKAILEE--GTT--VVVKRLK-EVVMGKREFEQQM---EVVGRLSQHPNV 394
VLGKGS+G K +L E GT VK LK +VV+ + E M V+ + P +
Sbjct: 27 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 83
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR--TPLDWESRVKISLG----SAK 448
+ + + + D V +++ G L++ + +GR P +I++G +K
Sbjct: 84 TQLHSCFQTMDRLYFVMEYVNGGD---LMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRA 504
GI I ++K NV+L + I+DFG+ V ++ + Y A
Sbjct: 141 GI-----------IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 189
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
PE+I + + D ++FGVLL EML G+AP + +++
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 88
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 89 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 200
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 233
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
HPN++ + + K LV +F E G + I R D I GI
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----INRHKFDECDAANIMKQILSGI 159
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLMNTP-TVPSR--SAGYRA 504
++H + +IK N+LL L I DFGL+ + + R +A Y A
Sbjct: 160 CYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV 545
PEV++ KK +K DV+S GV++ +L G P +D++
Sbjct: 217 PEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 45/233 (19%)
Query: 337 LRASAEVLGKGSYGTTYKAILEEGTTVVVKRLK----EVVMGKREFEQQMEVVGRLSQHP 392
L S ++LG GS GT +G V VKR+ ++ + +++++ HP
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 87
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSAL-LHGNRGIGRTPLDWESRVK-ISL--GSAK 448
NV+ YY S+ +Y +E + + L ++ + L + ISL A
Sbjct: 88 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLS-------------QDLQGCISDFGLTPLMNTPTV 495
G+AH+H+ K I ++K N+L+S ++L+ ISDFGL +++
Sbjct: 145 GVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 496 --------PSRSAGYRAPEVIE---TKKPTQKSDVYSFGVLLLEMLT-GKAPI 536
PS ++G+RAPE++E ++ T+ D++S G + +L+ GK P
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 29 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L R G L +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 146 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 259
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 260 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 28 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L R G L +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 145 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 258
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 259 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 25 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L R G L +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 142 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 255
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 256 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 343 VLGKGSYGTTYKAILEE--GTT--VVVKRLK-EVVMGKREFEQQM---EVVGRLSQHPNV 394
VLGKGS+G K +L E GT VK LK +VV+ + E M V+ + P +
Sbjct: 348 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR--TPLDWESRVKISLG----SAK 448
+ + + + D V +++ G L++ + +GR P +I++G +K
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGD---LMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRA 504
GI I ++K NV+L + I+DFG+ V ++ + Y A
Sbjct: 462 GI-----------IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 510
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
PE+I + + D ++FGVLL EML G+AP + +++
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 23/222 (10%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREF---EQQMEVVGRLS 389
DLLR V+G+GSY L++ + R+ KE+V + + + V + S
Sbjct: 55 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 390 QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
HP +V + + + ++ V +++ G + R + + S +ISL
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-AEISLA---- 165
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG-----LTPLMNTPTVPSRSAGYRA 504
+ ++H I ++K NVLL + ++D+G L P T T + Y A
Sbjct: 166 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG-TPNYIA 221
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
PE++ + D ++ GVL+ EM+ G++P G D D
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 263
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYR 503
GI H+H+A I ++K SN+++ D I DFGL T M TP V +R YR
Sbjct: 136 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY--YR 190
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
APEVI + D++S G ++ E++ G Q H D
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 428 GIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487
G + P+ E + S A+G+ + + K I ++ + N+LLS++ I DFGL
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLA 246
Query: 488 -PLMNTPTVPSRSA-----GYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPG 540
+ P + + APE I K + KSDV+S+GVLL E+ + G +P PG
Sbjct: 247 RDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY--PG 304
Query: 541 HEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTME 600
VQ + E++ S + E MR E ++ QI + C + P RP
Sbjct: 305 ----------VQ--MDEDFCSRL--REGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFA 350
Query: 601 EVVRMIEDI 609
E+V + D+
Sbjct: 351 ELVEKLGDL 359
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 38/265 (14%)
Query: 284 LKKKDSEGTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEV 343
L K S G+A + G P+ + GV EK K V Y + E
Sbjct: 16 LAKTWSSGSAKLQRLG-----PETEDNEGVLLTEKLKPV-----DYEYREEVHWMTHQPR 65
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS+G ++ ++ G VK+++ V E+ + G S P +VP+
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSS--PRIVPLYGAVR 120
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIHAAVGGKF 461
+ + +E GS L+ + +G P E R LG A +G+ ++H +
Sbjct: 121 EGPWVNIFMELLEGGSLGQLI---KQMGCLP---EDRALYYLGQALEGLEYLHTR---RI 171
Query: 462 ILGNIKSSNVLLSQD-LQGCISDFG----LTP------LMNTPTVPSRSAGYRAPEVIET 510
+ G++K+ NVLLS D + + DFG L P L+ +P + APEV+
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-HMAPEVVMG 230
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAP 535
K K D++S ++L ML G P
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGR---------LSQ 390
+ LG G++G E G V VK L R+ + ++VVG+ L +
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILN------RQKIRSLDVVGKIRREIQNLKLFR 74
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
HP+++ + + + +V +++ G + N GR R+ + S
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDY 131
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEV 507
H H V ++K NVLL + I+DFGL+ +M+ S G Y APEV
Sbjct: 132 CHRHMVVHR-----DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEV 186
Query: 508 IETK-KPTQKSDVYSFGVLLLEMLTGKAPI 536
I + + D++S GV+L +L G P
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 49/237 (20%)
Query: 337 LRASAEVLGKGSYGTTYKAILEEGTTVVVKRLK----EVVMGKREFEQQMEVVGRLSQHP 392
L S ++LG GS GT +G V VKR+ ++ + +++++ HP
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 69
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSAL-LHGNRGIGRTPLDWESRVK-ISL--GSAK 448
NV+ YY S+ +Y +E + + L ++ + L + ISL A
Sbjct: 70 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLS-------------QDLQGCISDFGLTPLMNTPTV 495
G+AH+H+ K I ++K N+L+S ++L+ ISDFGL +++
Sbjct: 127 GVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 496 --------PSRSAGYRAPEVIE-------TKKPTQKSDVYSFGVLLLEMLT-GKAPI 536
PS ++G+RAPE++E ++ T+ D++S G + +L+ GK P
Sbjct: 184 XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 342 EVLGKGSYG-----TTYKAILEEGTTVVVKRLKEVVMGKREFEQQME---VVGRLSQHPN 393
E LG+GS+G T YK V +K + ++ K + ++E +L +HP+
Sbjct: 15 ETLGEGSFGKVKLATHYKT----QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
++ + + + ++V ++ F ++ R D R + A H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR----MTEDEGRRFFQQIICAIEYCHR 126
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIET 510
H K + ++K N+LL +L I+DFGL+ +M S G Y APEVI
Sbjct: 127 H-----KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING 181
Query: 511 K-KPTQKSDVYSFGVLLLEMLTGKAP 535
K + DV+S G++L ML G+ P
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 38/265 (14%)
Query: 284 LKKKDSEGTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEV 343
L K S G+A + G P+ + GV EK K V Y + E
Sbjct: 32 LAKTWSSGSAKLQRLG-----PETEDNEGVLLTEKLKPV-----DYEYREEVHWMTHQPR 81
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYF 402
+G+GS+G ++ ++ G VK+++ V E+ + G S P +VP+
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSS--PRIVPLYGAVR 136
Query: 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIHAAVGGKF 461
+ + +E GS L+ + +G P E R LG A +G+ ++H +
Sbjct: 137 EGPWVNIFMELLEGGSLGQLI---KQMGCLP---EDRALYYLGQALEGLEYLHTR---RI 187
Query: 462 ILGNIKSSNVLLSQD-LQGCISDFG----LTP------LMNTPTVPSRSAGYRAPEVIET 510
+ G++K+ NVLLS D + + DFG L P L+ +P + APEV+
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-HMAPEVVMG 246
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAP 535
K K D++S ++L ML G P
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 344 LGKGSYGTTYKAILE---EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
LG+G G +Y ++E +G +KR+ RE Q+ + RL HPN++ + AY
Sbjct: 37 LGEG--GFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 401 YF----SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+K E L+ F + G+ + + G L + + + LG +G+ IHA
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-LTEDQILWLLLGICRGLEAIHAK 153
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA-------------GYR 503
+ ++K +N+LL + Q + D G SR A YR
Sbjct: 154 ---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 504 APEVIETKKPT---QKSDVYSFGVLLLEMLTGKAP 535
APE+ + +++DV+S G +L M+ G+ P
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 342 EVLGKGSYGTTYKAILE-EGTTVVVKRL-KEVVMGKREFEQQME---VVGRLSQHPNVVP 396
+V+GKGS+G A + E VK L K+ ++ K+E + M V+ + +HP +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHIHA 455
+ + + D+ V D+I G L R E R + A + ++H+
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCF------LEPRARFYAAEIASALGYLHS 157
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP----LMNTPTVPSRSAGYRAPEVIETK 511
+ ++K N+LL ++DFGL +T + + Y APEV+ +
Sbjct: 158 L---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D + G +L EML G P + ++ D
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD 249
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 344 LGKGSYGTTYKAIL------EEGTTVVVKRLKEVV-MGKR-EFEQQMEVVGRLSQHPNVV 395
LG+GS+G Y+ + E T V +K + E M +R EF + V+ + H +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 78
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR-----TPLDWESRVKISLGSAKGI 450
+ L++ + + G + L R P ++++ A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRA 504
A+++A KF+ ++ + N +++D I DFG+T + T G + +
Sbjct: 139 AYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563
PE ++ T SDV+SFGV+L E+ T + P Q +E V+ R+V +
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVME-------GGL 245
Query: 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI-EDIRPSDSE 615
D + +N + +++++++ C P MRP+ E++ I E++ P E
Sbjct: 246 LD----KPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFRE 291
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL G +K L KEV++ K E + V + ++HP +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
++ + + D V ++ G H + R + E R + A+ ++ +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFH----LSRERVFTEERARFY--GAEIVSALE 119
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPSRSAG--YRAPEVIET 510
+ +IK N++L +D I+DFGL + + T+ + Y APEV+E
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 96 KL-YFTFQDDEKL--YFGLSYAKNGCLLKYIRKIGSF-----DETCTRFYTAEIVSALEY 147
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K ++ SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 251
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 31/212 (14%)
Query: 343 VLGKGSYGTTYKA-ILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS---QHPNVVPIR 398
+LGKGS+ Y+A + G V +K + + M K Q+++ ++ +HP+++ +
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVK-ISLGSAKGIAHIHAAV 457
Y+ + LV + G + L ++RVK S A+ +H +
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL-------------KNRVKPFSENEARHF--MHQII 122
Query: 458 GGKFILG-------NIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSA----GYRAPE 506
G L ++ SN+LL++++ I+DFGL + P + Y +PE
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLTGKAPIQA 538
+ +SDV+S G + +L G+ P
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL G +K L KEV++ K E + V + ++HP +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
++ + + D V ++ G H + R + E R + A+ ++ +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFH----LSRERVFTEERARFY--GAEIVSALE 119
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPSRSAG--YRAPEVIET 510
+ +IK N++L +D I+DFGL + + T+ + Y APEV+E
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL G +K L KEV++ K E + V + ++HP +
Sbjct: 14 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
++ + + D V ++ G H + R + E R + A+ ++ +
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGEL--FFH----LSRERVFTEERARFY--GAEIVSALE 122
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPSRSAG--YRAPEVIET 510
+ +IK N++L +D I+DFGL + + T+ + Y APEV+E
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 182
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 49/237 (20%)
Query: 337 LRASAEVLGKGSYGTTYKAILEEGTTVVVKRLK----EVVMGKREFEQQMEVVGRLSQHP 392
L S ++LG GS GT +G V VKR+ ++ + +++++ HP
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 69
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSAL-LHGNRGIGRTPLDWESRVK-ISL--GSAK 448
NV+ YY S+ +Y +E + + L ++ + L + ISL A
Sbjct: 70 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLS-------------QDLQGCISDFGLTPLMNTPTV 495
G+AH+H+ K I ++K N+L+S ++L+ ISDFGL +++
Sbjct: 127 GVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 496 --------PSRSAGYRAPEVIE-------TKKPTQKSDVYSFGVLLLEMLT-GKAPI 536
PS ++G+RAPE++E ++ T+ D++S G + +L+ GK P
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 342 EVLGKGSYGTTYKAILEE----GTTVVVKRLK-EVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL + G +K LK EV++ K E + V + S+HP +
Sbjct: 154 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI---SLGSAKGIA 451
++ + + D V ++ G H + R + E R + + SA
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGEL--FFH----LSRERVFSEDRARFYGAEIVSALDYL 264
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPS--RSAGYRAPEV 507
H V + ++K N++L +D I+DFGL + + T+ + + Y APEV
Sbjct: 265 HSEKNV----VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+E + D + GV++ EM+ G+ P HE + +L
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 360
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE-------QQMEVVGRLSQHPNV 394
E +G+G+YG YKA G T +K+++ ++E E +++ ++ L +H N+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKEL-KHSNI 62
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
V + +K +LV++ ++ LL G L+ + L GIA+ H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCH 117
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIE- 509
+ + ++K N+L++++ + I+DFGL P T + YRAP+V+
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPR 549
+KK + D++S G + EM+ G AP+ PG + L R
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG-APL-FPGVSEADQLMR 212
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 35/289 (12%)
Query: 334 EDLLRASAEVLGKGSYGTTYKA-ILEEGTTVV---VKRLKEVV-MGKREFEQQMEVVGRL 388
E ++ S V+GKG +G Y +++ + +K L + M + E + ++ R
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 389 SQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
HPNV+ + + L + + LL R R P + + L A+
Sbjct: 79 LNHPNVLALIGIMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNP-TVKDLISFGLQVAR 135
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPS----RSA---- 500
G+ ++ KF+ ++ + N +L + ++DFGL + S R A
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 501 GYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWT 560
+ A E ++T + T KSDV+SFGVLL E+LT AP H D DL ++ R
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP--PYRHIDPFDLTHFLAQGRR---- 246
Query: 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
L + E + + Q++Q C P +RPT +V +E I
Sbjct: 247 -------LPQPEYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQI 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 71
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 72 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 123
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 227
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 72
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 73 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 124
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 228
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 342 EVLGKGSYGTTYKAILEE----GTTVVVKRLK-EVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL + G +K LK EV++ K E + V + S+HP +
Sbjct: 157 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHI 453
++ + + D V ++ G H + R + E R + + ++
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGEL--FFH----LSRERVFSEDRARFYGAEIVSALDYL 267
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPS--RSAGYRAPEVIE 509
H+ + ++K N++L +D I+DFGL + + T+ + + Y APEV+E
Sbjct: 268 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 325
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 363
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILE-----EGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVP 396
LG+G +G + G V VK LK + ++Q+++++ R H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDIL-RTLYHEHIIK 80
Query: 397 IRAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + EK LV +++ GS L IG L + + +G+A++H
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLH 134
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR----------- 503
A +I N+ + NVLL D I DFGL VP YR
Sbjct: 135 AQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVFW 186
Query: 504 -APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE--DVVDLPRWVQSVVREEWT 560
APE ++ K SDV+SFGV L E+LT Q+P + +++ + + +V+R
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR---L 243
Query: 561 SEVFDV--ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610
+E+ + L R + E+ +++ +C RPT E ++ +++ +
Sbjct: 244 TELLERGERLPRPDKCPCEVYHLMK---NCWETEASFRPTFENLIPILKTVH 292
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 70
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 71 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 122
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 73
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 74 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 125
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 81
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 82 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 139 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 193
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 194 MGYKENVDLWSVGCIMGEMVCHK--ILFPG-RDYID 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 43/245 (17%)
Query: 302 NEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGT 361
N +PKE G GV + C + ++ +V G GS+ L E T
Sbjct: 18 NYEPKEILGRGVSSVVRR-------CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 362 TVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA 421
LKEV +++ ++S HPN++ ++ Y + LV+D ++ G
Sbjct: 71 ------LKEV-----------DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD 113
Query: 422 LLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCI 481
L + L + KI + I +H + ++K N+LL D+ +
Sbjct: 114 YL-----TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKL 165
Query: 482 SDFGLTPLMNTPTVPSRSA----GYRAPEVIETKKPT------QKSDVYSFGVLLLEMLT 531
+DFG + ++ P RS Y APE+IE ++ D++S GV++ +L
Sbjct: 166 TDFGFSCQLD-PGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 532 GKAPI 536
G P
Sbjct: 225 GSPPF 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 77
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 78 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 129
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 92
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 93 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 248
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 92
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 93 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 248
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 80
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 81 LLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS 137
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 138 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 192
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYR 503
GI H+H+A I ++K SN+++ D I DFGL T M TP V +R YR
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY--YR 192
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
APEVI D++S G ++ E++ G Q H D
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHID 232
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL G +K L KEV++ K E + V + ++HP +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
++ + + D V ++ G H + R + E R + A+ ++ +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFH----LSRERVFTEERARFY--GAEIVSALE 119
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPSRSAG--YRAPEVIET 510
+ +IK N++L +D I+DFGL + + T+ Y APEV+E
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 92
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 93 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 149
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 150 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 204
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHK--ILFPG-RDYID 237
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL G +K L KEV++ K E + V + ++HP +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
++ + + D V ++ G H + R + E R + A+ ++ +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFH----LSRERVFTEERARFY--GAEIVSALE 119
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPSRSAG--YRAPEVIET 510
+ +IK N++L +D I+DFGL + + T+ Y APEV+E
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL G +K L KEV++ K E + V + ++HP +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
++ + + D V ++ G H + R + E R + A+ ++ +
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFH----LSRERVFTEERARFY--GAEIVSALE 119
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPSRSAG--YRAPEVIET 510
+ +IK N++L +D I+DFGL + + T+ Y APEV+E
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 232
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL G +K L KEV++ K E + V + ++HP +
Sbjct: 16 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
++ + + D V ++ G H + R + E R + A+ ++ +
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGEL--FFH----LSRERVFTEERARFY--GAEIVSALE 124
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPSRSAG--YRAPEVIET 510
+ +IK N++L +D I+DFGL + + T+ Y APEV+E
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 184
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 343 VLGKGSYGTTYKAILEEGTT--VVVKRLK-EVVMGKREFEQQM---EVVGRLSQHPNVVP 396
VLGKGS+G A +GT +K LK +VV+ + E M V+ L + P +
Sbjct: 26 VLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGR--TPLDWESRVKISLGSAKGIAHIH 454
+ + + + D V +++ G L++ + +G+ P +IS+G + +H
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGD---LMYHIQQVGKFKEPQAVFYAAEISIG----LFFLH 137
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVIET 510
I ++K NV+L + I+DFG+ V +R + Y APE+I
Sbjct: 138 KR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAY 194
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
+ + D +++GVLL EML G+ P +++
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEV----VGRLSQHPNVVPI 397
+G GSYG K + +G +V K L M E E+QM V + R +HPN+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 398 RAYYFSKDEKLL--VYDFIEAGSFSALLHGNRGIG-RTPLDWES--RVKISLGSAKGIAH 452
+ L V ++ E G ++++ +G R LD E RV L A H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVI 508
+ G + ++K +NV L + DFGL ++N T ++ + Y +PE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQA 538
+KSD++S G LL E+ P A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 100
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 101 KL-YFCFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 152
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 256
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKXVNHKNIIS 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEV----VGRLSQHPNVVPI 397
+G GSYG K + +G +V K L M E E+QM V + R +HPN+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 398 RAYYFSKDEKLL--VYDFIEAGSFSALLHGNRGIG-RTPLDWES--RVKISLGSAKGIAH 452
+ L V ++ E G ++++ +G R LD E RV L A H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVI 508
+ G + ++K +NV L + DFGL ++N T +++ Y +PE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQA 538
+KSD++S G LL E+ P A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 96 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 147
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 251
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 342 EVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEV-VGRLSQHPNVVPIRA 399
E LG G +G + I ++ G V +K+ ++ + K +E+ + + HPNVV R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 400 Y------YFSKDEKLLVYDFIEAGSFSALLHGNR---GIGRTPLDWESRVKISLGSAKGI 450
D LL ++ E G L+ G+ P+ R +S S+ +
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI----RTLLSDISS-AL 134
Query: 451 AHIHAAVGGKFILGNIKSSNVLLS---QDLQGCISDFGLTPLMNTPTVPSRSAG---YRA 504
++H + I ++K N++L Q L I D G ++ + + G Y A
Sbjct: 135 RYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
PE++E KK T D +SFG L E +TG P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 342 EVLGKGSYGTTYKAILEE----GTTVVVKRLK-EVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL + G +K LK EV++ K E + V + S+HP +
Sbjct: 14 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHI 453
++ + + D V ++ G H + R + E R + + ++
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGEL--FFH----LSRERVFSEDRARFYGAEIVSALDYL 124
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPS--RSAGYRAPEVIE 509
H+ + ++K N++L +D I+DFGL + + T+ + Y APEV+E
Sbjct: 125 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 220
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 93
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 94 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 145
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 249
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 342 EVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEV-VGRLSQHPNVVPIRA 399
E LG G +G + I ++ G V +K+ ++ + K +E+ + + HPNVV R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 400 Y------YFSKDEKLLVYDFIEAGSFSALLHGNR---GIGRTPLDWESRVKISLGSAKGI 450
D LL ++ E G L+ G+ P+ R +S S+ +
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI----RTLLSDISS-AL 135
Query: 451 AHIHAAVGGKFILGNIKSSNVLLS---QDLQGCISDFGLTPLMNTPTVPSRSAG---YRA 504
++H + I ++K N++L Q L I D G ++ + + G Y A
Sbjct: 136 RYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
PE++E KK T D +SFG L E +TG P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 342 EVLGKGSYGTTYKAILEE----GTTVVVKRLK-EVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL + G +K LK EV++ K E + V + S+HP +
Sbjct: 15 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHI 453
++ + + D V ++ G H + R + E R + + ++
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGEL--FFH----LSRERVFSEDRARFYGAEIVSALDYL 125
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPSRSAG--YRAPEVIE 509
H+ + ++K N++L +D I+DFGL + + T+ Y APEV+E
Sbjct: 126 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 221
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 322 VFFEGCSYNFDLE-DLLRASAEVLGKGSYGTTYKA-ILEEGTTVVVKRLKEVV--MGKRE 377
++F+G NF+++ D L E LG+G+YG K + G VKR++ V ++
Sbjct: 20 LYFQGAXENFEVKADDLEPIXE-LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKR 78
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT-PLDW 436
+++ R P V F + + + + + S G+T P D
Sbjct: 79 LLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDT-SLDKFYKQVIDKGQTIPEDI 137
Query: 437 ESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP 496
++ +S+ K + H+H+ + I ++K SNVL++ Q DFG++ +
Sbjct: 138 LGKIAVSI--VKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK 193
Query: 497 SRSAG---YRAPEVI----ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPG 540
AG Y APE I K + KSD++S G+ +E+ + P + G
Sbjct: 194 DIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWG 244
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 93
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 94 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 145
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 249
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 96
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG D + + ++H
Sbjct: 97 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLH- 150
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 252
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 96
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 97 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 148
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 252
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 41/244 (16%)
Query: 302 NEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGT 361
N +PKE G GV + C + ++ +V G GS+ L E T
Sbjct: 5 NYEPKEILGRGVSSVVRR-------CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 57
Query: 362 TVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA 421
LKEV +++ ++S HPN++ ++ Y + LV+D ++ G
Sbjct: 58 ------LKEV-----------DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD 100
Query: 422 LLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCI 481
L + L + KI + I +H + ++K N+LL D+ +
Sbjct: 101 YL-----TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKL 152
Query: 482 SDFGLTPLMNTPTVPSRSAG---YRAPEVIETKKPT------QKSDVYSFGVLLLEMLTG 532
+DFG + ++ G Y APE+IE ++ D++S GV++ +L G
Sbjct: 153 TDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
Query: 533 KAPI 536
P
Sbjct: 213 SPPF 216
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 25/203 (12%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE-------QQMEVVGRLSQHPNV 394
E +G+G+YG YKA G T +K+++ ++E E +++ ++ L +H N+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKEL-KHSNI 62
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
V + +K +LV++ ++ LL G L+ + L GIA+ H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCH 117
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIE- 509
+ + ++K N+L++++ + I+DFGL P T + YRAP+V+
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 510 TKKPTQKSDVYSFGVLLLEMLTG 532
+KK + D++S G + EM+ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKI 442
V +L HPN+VP RA + + +E +V F+ GS L+ H G+ + + I
Sbjct: 79 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY-----I 133
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD----LQGCISDFGLTP-------LMN 491
G K + +IH ++ ++K+S++L+S D L G S+ + + +
Sbjct: 134 LQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHD 190
Query: 492 TPTVPSRSAGYRAPEVIET--KKPTQKSDVYSFGVLLLEMLTGKAPIQ 537
P + + +PEV++ + KSD+YS G+ E+ G P +
Sbjct: 191 FPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 342 EVLGKGSYGTTYKAILEE----GTTVVVKRLK-EVVMGKREFEQQM--EVVGRLSQHPNV 394
++LGKG++G K IL + G +K LK EV++ K E + V + S+HP +
Sbjct: 16 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHI 453
++ + + D V ++ G H + R + E R + + ++
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGEL--FFH----LSRERVFSEDRARFYGAEIVSALDYL 126
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--LMNTPTVPS--RSAGYRAPEVIE 509
H+ + ++K N++L +D I+DFGL + + T+ + Y APEV+E
Sbjct: 127 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ D + GV++ EM+ G+ P HE + +L
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 222
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 93
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 94 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 145
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 249
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 28/243 (11%)
Query: 310 GSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEE-GTTVVVKRL 368
GS ++ + G Y ++ DL +G G+ G +K + G + VK++
Sbjct: 1 GSSGSSGKQTGYLTIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQM 58
Query: 369 KEVVMGKREFEQQ----MEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLH 424
+ G +E ++ ++VV + P +V + + + + + + G+ + L
Sbjct: 59 RRS--GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLK 114
Query: 425 GNRGIGRTPLDWESRV--KISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCIS 482
R G P R+ K+++ K + ++ G I ++K SN+LL + Q +
Sbjct: 115 -KRMQGPIP----ERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLC 167
Query: 483 DFGLTPLMNTPTVPSRSAG---YRAPEVIETKKPTQ-----KSDVYSFGVLLLEMLTGKA 534
DFG++ + RSAG Y APE I+ PT+ ++DV+S G+ L+E+ TG+
Sbjct: 168 DFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF 227
Query: 535 PIQ 537
P +
Sbjct: 228 PYK 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 96 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 147
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 251
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKI 442
V +L HPN+VP RA + + +E +V F+ GS L+ H G+ + + I
Sbjct: 63 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY-----I 117
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD----LQGCISDFGLTP-------LMN 491
G K + +IH ++ ++K+S++L+S D L G S+ + + +
Sbjct: 118 LQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHD 174
Query: 492 TPTVPSRSAGYRAPEVIET--KKPTQKSDVYSFGVLLLEMLTGKAPIQ 537
P + + +PEV++ + KSD+YS G+ E+ G P +
Sbjct: 175 FPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 222
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 25/203 (12%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE-------QQMEVVGRLSQHPNV 394
E +G+G+YG YKA G T +K+++ ++E E +++ ++ L +H N+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKEL-KHSNI 62
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
V + +K +LV++ ++ LL G L+ + L GIA+ H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCH 117
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIE- 509
+ + ++K N+L++++ + I+DFGL P T + YRAP+V+
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 510 TKKPTQKSDVYSFGVLLLEMLTG 532
+KK + D++S G + EM+ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 98
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG D + + ++H
Sbjct: 99 KLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLH- 152
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 153 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 254
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKXVNHKNIIS 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 41/244 (16%)
Query: 302 NEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGT 361
N +PKE G GV + C + ++ +V G GS+ L E T
Sbjct: 18 NYEPKEILGRGVSSVVRR-------CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 362 TVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA 421
LKEV +++ ++S HPN++ ++ Y + LV+D ++ G
Sbjct: 71 ------LKEV-----------DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD 113
Query: 422 LLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCI 481
L + L + KI + I +H + ++K N+LL D+ +
Sbjct: 114 YL-----TEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKL 165
Query: 482 SDFGLTPLMNTPTVPSRSAG---YRAPEVIETKKPT------QKSDVYSFGVLLLEMLTG 532
+DFG + ++ G Y APE+IE ++ D++S GV++ +L G
Sbjct: 166 TDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
Query: 533 KAPI 536
P
Sbjct: 226 SPPF 229
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG +A+ ++ +
Sbjct: 96 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSF-----DETCTRFYTAEIVSALEY 147
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
K + SD+++ G ++ +++ G P +A G+E ++ Q +++ E+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLI-----FQKIIKLEY 251
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+G G+YG+ AI + G V +K+L + + KR + + + + + QH NV+ +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL--LLKHMQHENVIGLL 89
Query: 399 AYYFSKDEKLLVYDFIEAGSFSAL-LHGNRGIGRTPLDWESRVK-ISLGSAKGIAHIHAA 456
+ YDF F L G+ + E +++ + KG+ +IH+A
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFS----EEKIQYLVYQMLKGLKYIHSA 145
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRAPEVIET-KK 512
+ ++K N+ +++D + I DFGL + T V +R YRAPEVI +
Sbjct: 146 ---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR--WYRAPEVILSWMH 200
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
Q D++S G ++ EMLTGK + + D
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 69 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 122
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 34 IGSGAQGIVCAAYDAILER--NVAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 89
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 90 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 146
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M P V +R YRAPEVI
Sbjct: 147 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY--YRAPEVILG 201
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
+ D++S G ++ EM+ G H D
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID 234
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREF---EQQMEVVGRLS 389
DLLR V+G+GSY L++ + ++ KE+V + + + V + S
Sbjct: 23 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 390 QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
HP +V + + + ++ V +++ G + R + + S +ISL
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-AEISLA---- 133
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSRSAGYRAP 505
+ ++H I ++K NVLL + ++D+G+ +T + + Y AP
Sbjct: 134 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 190
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
E++ + D ++ GVL+ EM+ G++P G D
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYR 503
GI H+H+A I ++K SN+++ D I DFGL T M TP V +R YR
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YR 192
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
APEVI + D++S G ++ EM+ K I PG D +D
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 232
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 344 LGKGSYGTTYKAILEEG-----------TTVVVKRLKEVVMGK--REFEQQMEVVGRLSQ 390
LG+G++G + +L E T V VK LK K + +ME++ + +
Sbjct: 36 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESR 439
H N++ + ++ ++ G+ L G L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
V + A+G+ ++ + K I ++ + NVL+++D I+DFGL ++ ++
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE + + T +SDV+SFGVLL E+ T G +P PG V +L + ++
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PG-VPVEELFKLLK 266
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609
R + S N E+ M++ C VP RPT +++V ++ I
Sbjct: 267 EGHRMDKPS-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 81
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 82 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 139 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 193
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 226
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 88
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 89 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 200
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 233
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 80
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 81 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 137
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 138 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 192
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 225
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 232
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 342 EVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV--- 66
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH--- 120
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIETK 511
G +IK N+LL + ISDFGL + N + ++ G Y APE+++ +
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 512 K-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ + DV+S G++L ML G+ P P
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQP 209
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 86
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 87 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 143
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 144 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 198
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFE---QQMEVVGRLS 389
DLLR V+G+GSY L++ + ++ KE+V + + + V + S
Sbjct: 8 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 390 QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
HP +V + + + ++ V +++ G + R + + S +ISL
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-AEISLA---- 118
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSRSAGYRAP 505
+ ++H I ++K NVLL + ++D+G+ +T + + Y AP
Sbjct: 119 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 175
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
E++ + D ++ GVL+ EM+ G++P G D
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 213
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M P V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 200 MGYKENVDIWSVGCIMGEMVCHK--ILFPG-RDYID 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 125
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 126 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 182
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 183 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 237
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 270
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 81
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 82 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 139 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 193
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 88
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 89 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 200
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 115/236 (48%), Gaps = 32/236 (13%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQ---------QMEVVGRLSQHP 392
+ LG+G + T YKA + T + +K++ +G R + +++++ LS HP
Sbjct: 16 DFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HP 72
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
N++ + + K LV+DF+E ++ N + TP ++ + ++L +G+ +
Sbjct: 73 NIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTL---QGLEY 127
Query: 453 IHAAVGGKFILG-NIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV 507
+H +IL ++K +N+LL ++ ++DFGL +P + YRAPE+
Sbjct: 128 LHQ----HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
Query: 508 I-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV---VREEW 559
+ + D+++ G +L E+L + P PG D+ L R +++ E+W
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELLL-RVPF-LPGDSDLDQLTRIFETLGTPTEEQW 237
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 46/292 (15%)
Query: 344 LGKGSYGTTYKAILE-----EGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVP 396
LG+G +G + G V VK LK + ++Q+++++ R H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDIL-RTLYHEHIIK 80
Query: 397 IRAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + EK LV +++ GS L IG L + + +G+A++H
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLH 134
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR----------- 503
+ +I N+ + NVLL D I DFGL VP YR
Sbjct: 135 SQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVFW 186
Query: 504 -APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE--DVVDLPRWVQSVVREEWT 560
APE ++ K SDV+SFGV L E+LT Q+P + +++ + + +V+R
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR---L 243
Query: 561 SEVFDV--ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610
+E+ + L R + E+ +++ +C RPT E ++ +++ +
Sbjct: 244 TELLERGERLPRPDKCPCEVYHLMK---NCWETEASFRPTFENLIPILKTVH 292
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 69 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 122
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAY 400
LG G+ G +K + V+ ++L + + + + ++++V+ + P +V
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGA 75
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460
++S E + + ++ GS +L + GR P +V I++ KG+ ++ K
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREK--HK 128
Query: 461 FILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPEVIETKKPTQK 516
+ ++K SN+L++ + + DFG L M V +RS Y +PE ++ + +
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS--YMSPERLQGTHYSVQ 186
Query: 517 SDVYSFGVLLLEMLTGKAP 535
SD++S G+ L+EM G+ P
Sbjct: 187 SDIWSMGLSLVEMAVGRYP 205
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y A+L+ V +K+L + KR + + V+ + H N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIS 125
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 126 LLNVFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 182
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M TP V +R YRAPEVI
Sbjct: 183 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG 237
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHK--ILFPG-RDYID 270
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG + SA + ++H
Sbjct: 96 KLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLH- 149
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV 545
K + SD+++ G ++ +++ G P +A G+E ++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEGLI 242
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFE---QQMEVVGRLS 389
DLLR V+G+GSY L++ + ++ KE+V + + + V + S
Sbjct: 12 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 390 QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
HP +V + + + ++ V +++ G + R + + S +ISL
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-AEISLA---- 122
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSRSAGYRAP 505
+ ++H I ++K NVLL + ++D+G+ +T + + Y AP
Sbjct: 123 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 179
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
E++ + D ++ GVL+ EM+ G++P G D
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+G G+YG+ AI + G V +K+L + + KR + + + + + QH NV+ +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLL--KHMQHENVIGLL 107
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+ YDF F + + I E + KG+ +IH+A
Sbjct: 108 DVFTPASSLRNFYDFYLVMPF--MQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA-- 163
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRAPEVIET-KKPT 514
+ ++K N+ +++D + I DFGL + T V +R YRAPEVI +
Sbjct: 164 -GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR--WYRAPEVILSWMHYN 220
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHED 543
Q D++S G ++ EMLTGK + + D
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 342 EVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLS---QHPNVVPI 397
E LGKG++ + + + G K + + R+F Q++E R+ QHPN+V +
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 70
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ LV+D + G + D ++ L S IA+ H+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQILES---IAYCHS-- 123
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK 511
+ N+K N+LL+ +G ++DFGL +N AG Y +PEV++
Sbjct: 124 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
++ D+++ GV+L +L G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 342 EVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLS---QHPNVVPI 397
E LGKG++ + + + G K + + R+F Q++E R+ QHPN+V +
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 69
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ LV+D + G + D ++ L S IA+ H+
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQILES---IAYCHS-- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK 511
+ N+K N+LL+ +G ++DFGL +N AG Y +PEV++
Sbjct: 123 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
++ D+++ GV+L +L G P
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPF 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 341 AEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVV 395
++LG+GS+ T A L +K L++ + K ++ +V+ RL HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + F DEKL Y + LL R IG + SA + ++H
Sbjct: 96 KL-YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLH- 149
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------SAGYRAPEVIE 509
G I ++K N+LL++D+ I+DFG +++ + +R +A Y +PE++
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV 545
K + SD+++ G ++ +++ G P +A G+E ++
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRA-GNEGLI 242
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 342 EVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV--- 68
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIETK 511
G +IK N+LL + ISDFGL + N + ++ G Y APE+++ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 512 K-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ + DV+S G++L ML G+ P P
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 342 EVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV--- 68
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIETK 511
G +IK N+LL + ISDFGL + N + ++ G Y APE+++ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 512 K-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ + DV+S G++L ML G+ P P
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 342 EVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV--- 68
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIETK 511
G +IK N+LL + ISDFGL + N + ++ G Y APE+++ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 512 K-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ + DV+S G++L ML G+ P P
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 342 EVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV--- 68
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIETK 511
G +IK N+LL + ISDFGL + N + ++ G Y APE+++ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 512 K-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ + DV+S G++L ML G+ P P
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 342 EVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV--- 67
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH--- 121
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIETK 511
G +IK N+LL + ISDFGL + N + ++ G Y APE+++ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 512 K-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ + DV+S G++L ML G+ P P
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 342 EVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLS---QHPNVVPI 397
E LGKG++ + + + G K + + R+F Q++E R+ QHPN+V +
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 70
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ LV+D + G + D ++ L S IA+ H+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQILES---IAYCHS-- 123
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK 511
+ N+K N+LL+ +G ++DFGL +N AG Y +PEV++
Sbjct: 124 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
++ D+++ GV+L +L G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 32/228 (14%)
Query: 344 LGKGSYGTTY----KAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
LG G+YG K E ++++ + +++ V+ +L HPN++ +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVL-KLLDHPNIMKLYD 103
Query: 400 YYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
++ K LV + + G F ++H R + I G+ ++H
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIH------RMKFNEVDAAVIIKQVLSGVTYLHKH-- 155
Query: 459 GKFILGNIKSSNVLLS---QDLQGCISDFGLTPLM-NTPTVPSR--SAGYRAPEVIETKK 512
+ ++K N+LL +D I DFGL+ + N + R +A Y APEV+ KK
Sbjct: 156 -NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KK 213
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L G P ++++ D P W
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW 261
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-XINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
+GKG YG + G V VK E RE E V+ R H N++ A
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMR---HENILGFIAAD 100
Query: 402 F----SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
S + L+ D+ E GS L T LD +S +K++ S G+ H+H +
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 458 ---GGKFILG--NIKSSNVLLSQDLQGCISDFGLTP--LMNTPTV---PSRSAG---YRA 504
GK + ++KS N+L+ ++ CI+D GL + +T V P+ G Y
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 505 PEVIETK------KPTQKSDVYSFGVLLLEM 529
PEV++ + +D+YSFG++L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 343 VLGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNV 394
VLGKGS+G + IL E V+ KR + K ++++++ +L HPN+
Sbjct: 33 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 88
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + ++ K LV + G + I R +I GI ++H
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMH 143
Query: 455 AAVGGKFILGNIKSSNVLL---SQDLQGCISDFGL-TPLMNTPTVPSR--SAGYRAPEVI 508
K + ++K N+LL S+D I DFGL T + + + +A Y APEV+
Sbjct: 144 K---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 200
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 201 HGTYD-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 102/218 (46%), Gaps = 16/218 (7%)
Query: 326 GCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVV 385
G S+ D +DL + LG G +G V +K +KE M + EF ++ +V+
Sbjct: 1 GGSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVM 58
Query: 386 GRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLG 445
LS H +V + + ++ +++ G L R +T + +++
Sbjct: 59 MNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKD 113
Query: 446 SAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP-LMNTPTVPSRSAGY-- 502
+ + ++ + +F+ ++ + N L++ +SDFGL+ +++ SR + +
Sbjct: 114 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV 170
Query: 503 --RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQ 537
PEV+ K + KSD+++FGVL+ E+ + GK P +
Sbjct: 171 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 35/215 (16%)
Query: 342 EVLGKGSYGTTYKA-ILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS-QHPNVVPIRA 399
E+ +G +G +KA ++ + V + L++ K+ ++ + E+ +H N++ A
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQD----KQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 400 YYFSKD----EKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
E L+ F + GS + L GN + W ++ ++G++++H
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLHE 130
Query: 456 AV------GGKFILG--NIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG------ 501
V G K + + KS NVLL DL ++DFGL P + G
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRR 190
Query: 502 YRAPEVIETKKPTQKS-----DVYSFGVLLLEMLT 531
Y APEV+E Q+ D+Y+ G++L E+++
Sbjct: 191 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 344 LGKGSYG---TTYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+ G Y AILE V +K+L + KR + + V+ + H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIG 87
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNR-GIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ + + + +F + L+ N + + LD E + GI H+H+
Sbjct: 88 LLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 456 AVGGKFILGNIKSSNVLLSQDLQGCISDFGL-----TPLMNTPTVPSRSAGYRAPEVIET 510
A I ++K SN+++ D I DFGL T M P V +R YRAPEVI
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YRAPEVILG 199
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
+ D++S G ++ EM+ K I PG D +D
Sbjct: 200 MGYKENVDLWSVGCIMGEMVCHK--ILFPG-RDYID 232
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 447 AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR--- 503
+G+A++HA +I ++ + NVLL D I DFGL VP YR
Sbjct: 144 CEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEXYRVRE 195
Query: 504 ---------APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE--DVVDLPRWVQ 552
APE ++ K SDV+SFGV L E+LT Q+P + +++ + +
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 255
Query: 553 SVVREEWTSEVFDV--ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610
+V+R +E+ + L R + E+ +++ +C RPT E ++ +++ +
Sbjct: 256 TVLR---LTELLERGERLPRPDKCPAEVYHLMK---NCWETEASFRPTFENLIPILKTVH 309
Query: 611 PSDSENQPS 619
PS
Sbjct: 310 EKYQGQAPS 318
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 48/290 (16%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAILEE--------GTTVVVKRLKEVVMGKRE-FEQQMEV 384
EDL+ E LG+G++ +K + E T V++K L + E F + +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ +LS H ++V F DE +LV +F++ GS L N+ + W+ V L
Sbjct: 66 MSKLS-HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQL 122
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLL--SQDLQGC------ISDFGLTPLMNTPTVP 496
A +H I GN+ + N+LL +D + +SD G++ + +
Sbjct: 123 AWA-----MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 497 SRSAGYRAPEVIETKKPTQ-KSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSV 554
+ PE IE K +D +SFG L E+ + G P+ A +D R +Q
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA------LDSQRKLQ-- 229
Query: 555 VREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604
E+ R++ + ++ + +C+ PD RP+ ++R
Sbjct: 230 FYED-----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 107/237 (45%), Gaps = 27/237 (11%)
Query: 331 FDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQMEVVGRL 388
+D D+L E LG G++G ++ + + V V + + K + ++ ++ +L
Sbjct: 50 YDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL 105
Query: 389 SQHPNVVPIRAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSA 447
HP ++ + + K E +L+ +F+ G F + + + + + +
Sbjct: 106 -HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV-----INYMRQAC 159
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMNTP---TVPSRSAGY 502
+G+ H+H + +IK N++ + DFGL +N V + +A +
Sbjct: 160 EGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559
APE+++ + +D+++ GVL +L+G +P G +D+ L Q+V R +W
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA--GEDDLETL----QNVKRCDW 267
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVG 386
S N+D++ E LGKG++ + + + G K + + R+F Q++E
Sbjct: 28 SDNYDVK-------EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREA 79
Query: 387 RLS---QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKIS 443
R+ QHPN+V + + LV+D + G + D ++
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQI 137
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVPSRSA 500
L S IA+ H+ + N+K N+LL+ +G ++DFGL +N A
Sbjct: 138 LES---IAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 191
Query: 501 G---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
G Y +PEV++ ++ D+++ GV+L +L G P
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-XINKMLNHENVV-- 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 69 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 122
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 118/287 (41%), Gaps = 37/287 (12%)
Query: 343 VLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPIRA 399
++G+GSYG K ++ G V +K+ E K + M + L Q H N+V +
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGG 459
K LV++F++ L G LD++ K GI H+
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHSH--- 143
Query: 460 KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP------TVPSRSAGYRAPE-VIETKK 512
I +IK N+L+SQ + DFG + P V +R YRAPE ++ K
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR--WYRAPELLVGDVK 201
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL-----------PRWVQSVVREEWTS 561
+ DV++ G L+ EM G+ P+ PG D+ L PR + + +
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGE-PL-FPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259
Query: 562 EVFDVELMRYENIEEEMVQM----LQIAMSCVAKVPDMRPTMEEVVR 604
V E+ E +E ++ + +A C+ PD RP E++
Sbjct: 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT-------------TVVVKRLKEVVMGKREFEQQ 381
+LLR VLGKG YG ++ G ++V+ K+ K E
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 382 MEVVGRLSQHPNVVPIRAYYFSKDEKL-LVYDFIEAGS-FSALLHGNRGIGRTPLDWESR 439
EV +HP +V + Y F KL L+ +++ G F L + T + +
Sbjct: 76 EEV-----KHPFIVDL-IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP-LMNTPTVPSR 498
+ ++LG H+H I ++K N++L+ ++DFGL ++ TV
Sbjct: 130 ISMALG------HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX 180
Query: 499 SAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
G Y APE++ + D +S G L+ +MLTG P + +D
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 32/212 (15%)
Query: 341 AEVLGKGSYGTTYKAILEE---GTTVVVKRLKEVVMGKREFEQQMEVVGR---------L 388
+ LG G++G I E G V VK L R+ + ++VVG+ L
Sbjct: 16 GDTLGVGTFGKV--KIGEHQLTGHKVAVKILN------RQKIRSLDVVGKIKREIQNLKL 67
Query: 389 SQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
+HP+++ + + + +V +++ G + + GR R+ + SA
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAV 124
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAP 505
H H V ++K NVLL + I+DFGL+ +M+ S G Y AP
Sbjct: 125 DYCHRHMVVHR-----DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 506 EVIETK-KPTQKSDVYSFGVLLLEMLTGKAPI 536
EVI + + D++S GV+L +L G P
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 341 AEVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+ LG+G+YG A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-XINKMLNHENVV-- 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 -KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-- 121
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIET 510
G +IK N+LL + ISDFGL + N + ++ G Y APE+++
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 511 KK-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + DV+S G++L ML G+ P P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT-------------TVVVKRLKEVVMGKREFEQQ 381
+LLR VLGKG YG ++ G ++V+ K+ K E
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 382 MEVVGRLSQHPNVVPIRAYYFSKDEKL-LVYDFIEAGS-FSALLHGNRGIGRTPLDWESR 439
EV +HP +V + Y F KL L+ +++ G F L + T + +
Sbjct: 76 EEV-----KHPFIVDL-IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP-LMNTPTVPSR 498
+ ++LG H+H I ++K N++L+ ++DFGL ++ TV
Sbjct: 130 ISMALG------HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT 180
Query: 499 SAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546
G Y APE++ + D +S G L+ +MLTG P + +D
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 32/212 (15%)
Query: 341 AEVLGKGSYGTTYKAILEE---GTTVVVKRLKEVVMGKREFEQQMEVVGR---------L 388
+ LG G++G I E G V VK L R+ + ++VVG+ L
Sbjct: 16 GDTLGVGTFGKV--KIGEHQLTGHKVAVKILN------RQKIRSLDVVGKIKREIQNLKL 67
Query: 389 SQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
+HP+++ + + + +V +++ G + + GR R+ + SA
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAV 124
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAP 505
H H V ++K NVLL + I+DFGL+ +M+ S G Y AP
Sbjct: 125 DYCHRHMVVHR-----DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
Query: 506 EVIETK-KPTQKSDVYSFGVLLLEMLTGKAPI 536
EVI + + D++S GV+L +L G P
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 332 DLEDLLRASAEVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVV--MGKREFEQQMEVVGRL 388
DLE ++ LG+G+YG K + G + VKR++ V ++ +++ R
Sbjct: 52 DLEPIME-----LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 106
Query: 389 SQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT-PLDWESRVKISLGSA 447
P V F + + + + ++ S G+T P D ++ +S+
Sbjct: 107 VDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSI--V 163
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRA 504
K + H+H+ + I ++K SNVL++ Q + DFG++ + + AG Y A
Sbjct: 164 KALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMA 221
Query: 505 PEVI----ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPG 540
PE I K + KSD++S G+ ++E+ + P + G
Sbjct: 222 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 261
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 33/293 (11%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGR 387
S+ D +DL + LG G +G V +K +KE M + EF ++ +V+
Sbjct: 18 SWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 75
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
LS H +V + + ++ +++ G L R +T + +++
Sbjct: 76 LS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 130
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR-SAGY 502
+ + ++ + +F+ ++ + N L++ +SDFGL+ + T +V S+ +
Sbjct: 131 EAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW 187
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTS 561
PEV+ K + KSD+++FGVL+ E+ + GK P + + + + + R S
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 247
Query: 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614
E ++ I SC + D RPT + ++ I D+ +S
Sbjct: 248 E-----------------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 283
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAIL---EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ 390
++LL A E LG G++G+ + + ++ V +K LK+ K + E+ M + Q
Sbjct: 335 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQ 392
Query: 391 HPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
N +R + E L LV + G L G R +I + +
Sbjct: 393 LDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE------------EIPVSNVAE 440
Query: 450 IAHIHAAVGGK------FILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG 501
+ H ++G K F+ N+ + NVLL ISDFGL+ + + +RSAG
Sbjct: 441 LLH-QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
Query: 502 -----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQ 537
+ APE I +K + +SDV+S+GV + E L+ G+ P +
Sbjct: 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 343 VLGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNV 394
VLGKGS+G + IL E V+ KR + K ++++++ +L HPN+
Sbjct: 39 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 94
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + ++ K LV + G + I R +I GI ++H
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 455 AAVGGKFILGNIKSSNVLL---SQDLQGCISDFGL-TPLMNTPTVPSR--SAGYRAPEVI 508
K + ++K N+LL S+D I DFGL T + + + +A Y APEV+
Sbjct: 150 K---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 207 HGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 257
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 342 EVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+ LG+G+YG A+ EE V + +K V ++++ + + H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINAMLNHENVV--- 68
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIETK 511
G +IK N+LL + ISDFGL + N + ++ G Y APE+++ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 512 K-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ + DV+S G++L ML G+ P P
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 31/227 (13%)
Query: 331 FDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ 390
+D E VLGKG+YG Y + + V +KE+ + Q + L +
Sbjct: 17 YDYEYDENGDRVVLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIE---AGSFSALLHGNRGIGRTPL-DWESRVKISLGS 446
H I Y S E + F+E GS SALL G PL D E +
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQ 130
Query: 447 A-KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC--ISDFG-------LTPLMNTPTVP 496
+G+ ++H + + +IK NVL++ G ISDFG + P T T
Sbjct: 131 ILEGLKYLHD---NQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT-- 184
Query: 497 SRSAGYRAPEVIETKKPT---QKSDVYSFGVLLLEMLTGKAPIQAPG 540
+ Y APE+I+ K P + +D++S G ++EM TGK P G
Sbjct: 185 -GTLQYMAPEIID-KGPRGYGKAADIWSLGCTIIEMATGKPPFYELG 229
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 31/227 (13%)
Query: 331 FDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ 390
+D E VLGKG+YG Y + + V +KE+ + Q + L +
Sbjct: 3 YDYEYDENGDRVVLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIE---AGSFSALLHGNRGIGRTPL-DWESRVKISLGS 446
H I Y S E + F+E GS SALL G PL D E +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQ 116
Query: 447 A-KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC--ISDFG-------LTPLMNTPTVP 496
+G+ ++H + + +IK NVL++ G ISDFG + P T T
Sbjct: 117 ILEGLKYLHD---NQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT-- 170
Query: 497 SRSAGYRAPEVIETKKPT---QKSDVYSFGVLLLEMLTGKAPIQAPG 540
+ Y APE+I+ K P + +D++S G ++EM TGK P G
Sbjct: 171 -GTLQYMAPEIID-KGPRGYGKAADIWSLGCTIIEMATGKPPFYELG 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 344 LGKGSYGTTYKAILE-----EGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVP 396
LG+G +G + G V VK LKE + +++++E++ R H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEIL-RTLYHEHIVK 75
Query: 397 IRAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + EK LV +++ GS L +G L + + +G+A++H
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQL-----LLFAQQICEGMAYLH 129
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR----------- 503
A +I + + NVLL D I DFGL VP YR
Sbjct: 130 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVFW 181
Query: 504 -APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
APE ++ K SDV+SFGV L E+LT Q+P H +L Q + +E
Sbjct: 182 YAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP-HTKFTELIGHTQGQMTVLRLTE 240
Query: 563 VFDV--ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+ + L R + E+ +++ +C RPT + +V +++
Sbjct: 241 LLERGERLPRPDRCPCEIYHLMK---NCWETEASFRPTFQNLVPILQ 284
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 344 LGKGSYGTTYKAILE-----EGTTVVVKRLKEVVMGKR--EFEQQMEVVGRLSQHPNVVP 396
LG+G +G + G V VK LK G + ++++E++ L H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVK 75
Query: 397 IRAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ L+ +F+ +GS L N+ ++ + ++K ++ KG+ ++
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLG 131
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAG---YRAPEV 507
+ +++ ++ + NVL+ + Q I DFGLT + T TV + APE
Sbjct: 132 SR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT 531
+ K SDV+SFGV L E+LT
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
VV + Y +KD LV + G ++ +G+ V + G+ +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDL 302
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---TVPSR--SAGYRAPEVI 508
H + + ++K N+LL ISD GL ++ P T+ R + GY APEV+
Sbjct: 303 HRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQ 537
+ ++ T D ++ G LL EM+ G++P Q
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 342 EVLGKGSYGTTY--KAI--LEEGTTVVVKRLKEVVMGKR-----EFEQQMEVVGRLSQHP 392
+VLG G+YG + + I + G +K LK+ + ++ + +V+ + Q P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 393 NVVPIRAYYFSKDEKL-LVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGS-AKG 449
+V + Y F + KL L+ D+I G F+ L R E V+I +G
Sbjct: 120 FLVTLH-YAFQTETKLHLILDYINGGELFTHLSQRERFT-------EHEVQIYVGEIVLA 171
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR-----SAGYRA 504
+ H+H I +IK N+LL + ++DFGL+ + Y A
Sbjct: 172 LEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 505 PEVIETKKPTQKS--DVYSFGVLLLEMLTGKAPIQAPG 540
P+++ D +S GVL+ E+LTG +P G
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 343 VLGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNV 394
VLGKGS+G + IL E V+ KR + K ++++++ +L HPN+
Sbjct: 56 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 111
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + ++ K LV + G + I R +I GI ++H
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMH 166
Query: 455 AAVGGKFILGNIKSSNVLL---SQDLQGCISDFGL-TPLMNTPTVPSR--SAGYRAPEVI 508
K + ++K N+LL S+D I DFGL T + + + +A Y APEV+
Sbjct: 167 K---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 223
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 224 HGTYD-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 274
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
VV + Y +KD LV + G ++ +G+ V + G+ +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDL 302
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---TVPSR--SAGYRAPEVI 508
H + + ++K N+LL ISD GL ++ P T+ R + GY APEV+
Sbjct: 303 HRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQ 537
+ ++ T D ++ G LL EM+ G++P Q
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 344 LGKGSYGTTYKAILE-----EGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVP 396
LG+G +G + G V VK LKE + +++++E++ R H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEIL-RTLYHEHIVK 74
Query: 397 IRAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + EK LV +++ GS L +G L + + +G+A++H
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQL-----LLFAQQICEGMAYLH 128
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYR----------- 503
A +I + + NVLL D I DFGL VP YR
Sbjct: 129 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVFW 180
Query: 504 -APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562
APE ++ K SDV+SFGV L E+LT Q+P H +L Q + +E
Sbjct: 181 YAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP-HTKFTELIGHTQGQMTVLRLTE 239
Query: 563 VFDV--ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+ + L R + E+ +++ +C RPT + +V +++
Sbjct: 240 LLERGERLPRPDRCPCEIYHLMK---NCWETEASFRPTFQNLVPILQ 283
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 343 VLGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNV 394
VLGKGS+G + IL E V+ KR + K ++++++ +L HPN+
Sbjct: 57 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 112
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + ++ K LV + G + I R +I GI ++H
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMH 167
Query: 455 AAVGGKFILGNIKSSNVLL---SQDLQGCISDFGL-TPLMNTPTVPSR--SAGYRAPEVI 508
K + ++K N+LL S+D I DFGL T + + + +A Y APEV+
Sbjct: 168 K---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 224
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 225 HGTYD-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 275
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEV----VGRLSQHPNVVPI 397
+G GSYG K + +G +V K L M E E+QM V + R +HPN+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 398 RAYYFSKDEKLL--VYDFIEAGSFSALLHGNRGIG-RTPLDWES--RVKISLGSAKGIAH 452
+ L V ++ E G ++++ +G R LD E RV L A H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVI 508
+ G + ++K +NV L + DFGL ++N ++ + Y +PE +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQA 538
+KSD++S G LL E+ P A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 344 LGKGSYGTTYKAILE-----EGTTVVVKRLKEVVMGKR--EFEQQMEVVGRLSQHPNVVP 396
LG+G +G + G V VK LK G + ++++E++ L H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVK 87
Query: 397 IRAYYFSKDEK--LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ L+ +F+ +GS L N+ ++ + ++K ++ KG+ ++
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLG 143
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAG---YRAPEV 507
+ +++ ++ + NVL+ + Q I DFGLT + T TV + APE
Sbjct: 144 SR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT 531
+ K SDV+SFGV L E+LT
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 33/293 (11%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGR 387
S+ D +DL + LG G +G V +K +KE M + EF ++ +V+
Sbjct: 18 SWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 75
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
LS H +V + + ++ +++ G L R +T + +++
Sbjct: 76 LS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 130
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR-SAGY 502
+ + ++ + +F+ ++ + N L++ +SDFGL+ + T +V S+ +
Sbjct: 131 EAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 187
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTS 561
PEV+ K + KSD+++FGVL+ E+ + GK P + + + + + R S
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 247
Query: 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614
E ++ I SC + D RPT + ++ I D+ +S
Sbjct: 248 E-----------------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 283
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 332 DLEDLLRASAEVLGKGSYGTTYKA-ILEEGTTVVVKRLKEVV--MGKREFEQQMEVVGRL 388
DLE ++ LG+G+YG K + G + VKR++ V ++ +++ R
Sbjct: 8 DLEPIME-----LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 62
Query: 389 SQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT-PLDWESRVKISLGSA 447
P V F + + + + ++ S G+T P D ++ +S+
Sbjct: 63 VDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSI--V 119
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRA 504
K + H+H+ + I ++K SNVL++ Q + DFG++ + AG Y A
Sbjct: 120 KALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMA 177
Query: 505 PEVI----ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPG 540
PE I K + KSD++S G+ ++E+ + P + G
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAIL---EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ 390
++LL A E LG G++G+ + + ++ V +K LK+ K + E+ M + Q
Sbjct: 9 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQ 66
Query: 391 HPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
N +R + E L LV + G L G R +I + +
Sbjct: 67 LDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE------------EIPVSNVAE 114
Query: 450 IAHIHAAVGGK------FILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG 501
+ H ++G K F+ ++ + NVLL ISDFGL+ + + +RSAG
Sbjct: 115 LLH-QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 173
Query: 502 -----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQ 537
+ APE I +K + +SDV+S+GV + E L+ G+ P +
Sbjct: 174 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 25/204 (12%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPN-VVP 396
LGKG++G+ Y + + G V VK+L+ + R+F+++++++ L H + +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIVK 72
Query: 397 IR--AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
R +Y + E LV +++ +G L +R LD + S KG+ ++
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG 128
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEV 507
+ + + ++ + N+L+ + I+DFGL L+ + R G + APE
Sbjct: 129 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT 531
+ +++SDV+SFGV+L E+ T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 119/277 (42%), Gaps = 31/277 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS 403
LG G +G V +K +KE M + EF ++ +V+ LS H +V +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 70
Query: 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+ ++ +++ G L R +T + +++ + + ++ + +F+
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR-SAGYRAPEVIETKKPTQKSD 518
++ + N L++ +SDFGL+ + T +V S+ + PEV+ K + KSD
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 519 VYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577
+++FGVL+ E+ + GK P + + + + + R SE
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE--------------- 228
Query: 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614
++ I SC + D RPT + ++ I D+ +S
Sbjct: 229 --KVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 263
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQ 390
+D R S LG G+ G K ++ ++L + + + + ++++V+ +
Sbjct: 16 DDFERISE--LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS 73
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
P +V ++S E + + ++ GS +L + I L K+S+ +G+
Sbjct: 74 -PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGL 127
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG----LTPLMNTPTVPSRSAGYRAPE 506
A++ + + ++K SN+L++ + + DFG L M V +RS Y APE
Sbjct: 128 AYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMAPE 183
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539
++ + +SD++S G+ L+E+ G+ PI P
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPP 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 33/293 (11%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGR 387
S+ D +DL + LG G +G V +K +KE M + EF ++ +V+
Sbjct: 2 SWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 59
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
LS H +V + + ++ +++ G L R +T + +++
Sbjct: 60 LS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 114
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR-SAGY 502
+ + ++ + +F+ ++ + N L++ +SDFGL+ + T +V S+ +
Sbjct: 115 EAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 171
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTS 561
PEV+ K + KSD+++FGVL+ E+ + GK P + + + + + R S
Sbjct: 172 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 231
Query: 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614
E ++ I SC + D RPT + ++ I D+ +S
Sbjct: 232 E-----------------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 267
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 33/293 (11%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGR 387
S+ D +DL + LG G +G V +K +KE M + EF ++ +V+
Sbjct: 9 SWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 66
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
LS H +V + + ++ +++ G L R +T + +++
Sbjct: 67 LS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 121
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR-SAGY 502
+ + ++ + +F+ ++ + N L++ +SDFGL+ + T +V S+ +
Sbjct: 122 EAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 178
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTS 561
PEV+ K + KSD+++FGVL+ E+ + GK P + + + + + R S
Sbjct: 179 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 238
Query: 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614
E ++ I SC + D RPT + ++ I D+ +S
Sbjct: 239 E-----------------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 274
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKR-EFEQQMEVVGRLSQHPNVVPIR 398
+VLG G++ A + +V + KE + GK E ++ V+ ++ +HPN+V +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVALD 82
Query: 399 AYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
Y S L+ + G F ++ R SR+ + A + ++H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA----SRLIFQVLDA--VKYLHDL- 135
Query: 458 GGKFILGNIKSSNVL---LSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK 511
+ ++K N+L L +D + ISDFGL+ + + +V S + G Y APEV+ K
Sbjct: 136 --GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
++ D +S GV+ +L G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKR-EFEQQMEVVGRLSQHPNVVPIR 398
+VLG G++ A + +V + KE + GK E ++ V+ ++ +HPN+V +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVALD 82
Query: 399 AYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
Y S L+ + G F ++ R SR+ + A + ++H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA----SRLIFQVLDA--VKYLHDL- 135
Query: 458 GGKFILGNIKSSNVL---LSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK 511
+ ++K N+L L +D + ISDFGL+ + + +V S + G Y APEV+ K
Sbjct: 136 --GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
++ D +S GV+ +L G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 359 EGTTVVVKRLK---EVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS--KDEKLLVYDF 413
+G +VVK LK R+F ++ + R+ HPNV+P+ S L+ +
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRL-RIFSHPNVLPVLGACQSPPAPHPTLITHW 90
Query: 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL 473
+ GS +LH +D VK +L A+G+A +H + + S +V++
Sbjct: 91 MPYGSLYNVLHEGTNFV---VDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMI 146
Query: 474 SQDLQGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETKKPT----QKSDVYSFGVLLLEM 529
+D+ IS + +P + + APE ++ KKP + +D++SF VLL E+
Sbjct: 147 DEDMTARISMADVKFSFQSPGR-MYAPAWVAPEALQ-KKPEDTNRRSADMWSFAVLLWEL 204
Query: 530 LTGKAPI 536
+T + P
Sbjct: 205 VTREVPF 211
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKR-EFEQQMEVVGRLSQHPNVVPIR 398
+VLG G++ A + +V + KE + GK E ++ V+ ++ +HPN+V +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVALD 82
Query: 399 AYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
Y S L+ + G F ++ R SR+ + A + ++H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA----SRLIFQVLDA--VKYLHDL- 135
Query: 458 GGKFILGNIKSSNVL---LSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK 511
+ ++K N+L L +D + ISDFGL+ + + +V S + G Y APEV+ K
Sbjct: 136 --GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
++ D +S GV+ +L G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 95/232 (40%), Gaps = 37/232 (15%)
Query: 343 VLGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNV 394
VLGKGS+G + IL E V+ KR + K ++++++ +L HPN+
Sbjct: 33 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 88
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ ++ K LV + G + I R +I GI + H
Sbjct: 89 XKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYXH 143
Query: 455 AAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVI 508
K + ++K N+LL S+D I DFGL+ G Y APEV+
Sbjct: 144 K---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL 200
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 201 HGTYD-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTT--VVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 21 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 75
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 134
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 188
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 28/233 (12%)
Query: 333 LEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEV-VGRLSQH 391
+EDL +G+G+YG YKA ++G LK++ E+ + R +H
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 392 PNVVPIRAYYFSKDEK--LLVYDFIEAGSFSAL-LHGNRGIGRTPLDWESRVKISLGSAK 448
PNV+ ++ + S ++ L++D+ E + + H + P V++ G K
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP------VQLPRGMVK 131
Query: 449 GIAH-----IHAAVGGKFILGNIKSSNVLL----SQDLQGCISDFGLTPLMNTPTVPSR- 498
+ + IH + ++K +N+L+ + + I+D G L N+P P
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 499 ------SAGYRAPE-VIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
+ YRAPE ++ + T+ D+++ G + E+LT + PI ED+
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQEDI 243
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTT--VVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 23 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 77
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 136
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 190
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 30/228 (13%)
Query: 343 VLGKGSYGTTYKA----ILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+LGKGS+G K +E V+ + +++E++ +L HPN++ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLF 87
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+V + G + I R +I GI ++H
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 459 GKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPT-VPSR--SAGYRAPEVIETKK 512
+ ++K N+LL + C I DFGL+ T + R +A Y APEV+
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 200 D-EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTT--VVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 22 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 76
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 135
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 189
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 344 LGKGSYGT---TYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+YG+ Y A L + V VK+L + ++ +R + +++ ++ L +H NV+
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTY-RELRLLKHL-KHENVIG 83
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHG--NRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + + DF E + L+ N + L E + +G+ +IH
Sbjct: 84 LLDVFTPATS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRAPEV-IET 510
+A I ++K SNV +++D + I DFGL + T V +R YRAPE+ +
Sbjct: 141 SA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR--WYRAPEIMLNW 195
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
Q D++S G ++ E+L GKA PG + + L R ++ V
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVV 237
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 48/290 (16%)
Query: 334 EDLLRASAEVLGKGSYGTTYKAILEE--------GTTVVVKRLKEVVMGKRE-FEQQMEV 384
EDL+ E LG+G++ +K + E T V++K L + E F + +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ +LS H ++V DE +LV +F++ GS L N+ + W+ V L
Sbjct: 66 MSKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQL 122
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLL--SQDLQGC------ISDFGLTPLMNTPTVP 496
+A +H I GN+ + N+LL +D + +SD G++ + +
Sbjct: 123 AAA-----MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 497 SRSAGYRAPEVIETKKPTQ-KSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSV 554
+ PE IE K +D +SFG L E+ + G P+ A +D R +Q
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA------LDSQRKLQ-- 229
Query: 555 VREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604
E+ R++ + ++ + +C+ PD RP+ ++R
Sbjct: 230 FYED-----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT--TVVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 16 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 70
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 129
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 183
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT--TVVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 15 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 69
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 128
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 182
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 344 LGKGSYGT---TYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+YG+ Y A L + V VK+L + ++ +R + +++ ++ L +H NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTY-RELRLLKHL-KHENVIG 91
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHG--NRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + + DF E + L+ N + L E + +G+ +IH
Sbjct: 92 LLDVFTPATS---IEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRAPEV-IET 510
+A I ++K SNV +++D + I DFGL + T V +R YRAPE+ +
Sbjct: 149 SA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR--WYRAPEIMLNW 203
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
Q D++S G ++ E+L GKA PG + + L R ++ V
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVV 245
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTT--VVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 17 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 71
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 130
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 184
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGR 387
S+ D +DL + LG G +G V +K +KE M + EF ++ +V+
Sbjct: 3 SWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 60
Query: 388 LSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
LS H +V + + ++ +++ G L R +T + +++
Sbjct: 61 LS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 115
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR-SAGY 502
+ + ++ + +F+ ++ + N L++ +SDFGL+ + T +V S+ +
Sbjct: 116 EAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 172
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQ 537
PEV+ K + KSD+++FGVL+ E+ + GK P +
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 342 EVLGKGSYGTTYKAILEE-GTTVVVKRL-------KEVVMGKREFEQQMEVVGRLSQHPN 393
E LG G++G ++ G K + KE V R+ Q M V+ +HP
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV---RKEIQTMSVL----RHPT 109
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
+V + + +E +++Y+F+ G F + + + + V+ KG+ H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE-----DEAVEYMRQVCKGLCH 164
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMN---TPTVPSRSAGYRAPEV 507
+H ++ ++K N++ + + DFGLT ++ + V + +A + APEV
Sbjct: 165 MHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 221
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
E K +D++S GVL +L+G +P
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYG---TTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEV 384
S++ ED+ + +VLG+G++ T I + V + + + R F +++E+
Sbjct: 5 SFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF-REVEM 63
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ + H NV+ + ++ +D LV++ + GS + +H R S V +
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE---ASVVVQDV 120
Query: 445 GSA------KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC---ISDFGL--------- 486
SA KGIAH ++K N+L Q I DFGL
Sbjct: 121 ASALDFLHNKGIAH-----------RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD 169
Query: 487 -TPLMNTPTV--PSRSAGYRAPEVIETKKP-----TQKSDVYSFGVLLLEMLTGKAPI 536
+P+ +TP + P SA Y APEV+E ++ D++S GV+L +L+G P
Sbjct: 170 CSPI-STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 40/220 (18%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGR-LSQHPNVVPI--- 397
E++G+G YG YK L+E V VK ++ F + + L +H N+
Sbjct: 19 ELIGRGRYGAVYKGSLDE-RPVAVKVFS--FANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 398 --RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
R + E LLV ++ GS L + DW S +++ +G+A++H
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHT 129
Query: 456 AV--GGKFILG----NIKSSNVLLSQDLQGCISDFGLTPLM------------NTPTVPS 497
+ G + ++ S NVL+ D ISDFGL+ + N
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 498 RSAGYRAPEVIE-------TKKPTQKSDVYSFGVLLLEML 530
+ Y APEV+E + ++ D+Y+ G++ E+
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 342 EVLGKGSYGTTYKAILEE-GTTVVVKRL-------KEVVMGKREFEQQMEVVGRLSQHPN 393
E LG G++G ++ G K + KE V R+ Q M V+ +HP
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV---RKEIQTMSVL----RHPT 215
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
+V + + +E +++Y+F+ G F + + + + V+ KG+ H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE-----DEAVEYMRQVCKGLCH 270
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMN---TPTVPSRSAGYRAPEV 507
+H ++ ++K N++ + + DFGLT ++ + V + +A + APEV
Sbjct: 271 MHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 327
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
E K +D++S GVL +L+G +P
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK I + +G V +K L+E K +E + V+ + P V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS-PYV 81
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRG-IG-RTPLDWESRVKISLGSAKGIAH 452
+ + +L V + G + NRG +G + L+W ++ AKG+++
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSY 134
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP------E 506
+ + + ++ + NVL+ I+DFGL L++ + G + P E
Sbjct: 135 LEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
I ++ T +SDV+S+GV + E++T G P ++ DL
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQ-MEV-VGRLSQHPNVVPIRA 399
LGKG + ++ + V ++ K +++ + E+ ME+ + R H +VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGG 459
++ D +V + S L H R P +I LG ++H
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 134
Query: 460 KFILGNIKSSNVLLSQDLQGCISDFGLTPLMN----TPTVPSRSAGYRAPEVIETKKPTQ 515
+ I ++K N+ L++DL+ I DFGL + V + Y APEV+ K +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 516 KSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S G ++ +L GK P +
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFET 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGTT--VVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 31 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 85
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 144
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 198
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 30/228 (13%)
Query: 343 VLGKGSYGTTYKA----ILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+LGKGS+G K +E V+ + +++E++ +L HPN++ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLF 87
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+V + G + I R +I GI ++H
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 459 GKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPT-VPSR--SAGYRAPEVIETKK 512
+ ++K N+LL + C I DFGL+ T + R +A Y APEV+
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 200 D-EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT--TVVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 61 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 115
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 174
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 228
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQ-MEV-VGRLSQHPNVVPIRA 399
LGKG + ++ + V ++ K +++ + E+ ME+ + R H +VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGG 459
++ D +V + S L H R P +I LG ++H
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 158
Query: 460 KFILGNIKSSNVLLSQDLQGCISDFGLTPLMN----TPTVPSRSAGYRAPEVIETKKPTQ 515
+ I ++K N+ L++DL+ I DFGL + V + Y APEV+ K +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 516 KSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S G ++ +L GK P +
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFET 241
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 30/228 (13%)
Query: 343 VLGKGSYGTTYKA----ILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+LGKGS+G K +E V+ + +++E++ +L HPN++ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLF 87
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+V + G + I R +I GI ++H
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 459 GKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPT-VPSR--SAGYRAPEVIETKK 512
+ ++K N+LL + C I DFGL+ T + R +A Y APEV+
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRW 550
+K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 200 D-EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT--TVVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 67 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 121
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 180
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 234
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 19/231 (8%)
Query: 332 DLEDLLRASAEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ 390
D+E+ + E +G+G+YG YKA + G V +K+++ + + + L +
Sbjct: 5 DMENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 391 --HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
HPN+V + ++++ LV++F+ + + G PL L
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGL 120
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRA 504
H H + + ++K N+L++ + ++DFGL P T + YRA
Sbjct: 121 AFCHSH-----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
PE+ + K + D++S G + EM+T +A PG ++ L R +++
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 224
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQ-MEV-VGRLSQHPNVVPIRA 399
LGKG + ++ + V ++ K +++ + E+ ME+ + R H +VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGG 459
++ D +V + S L H R P +I LG ++H
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 160
Query: 460 KFILGNIKSSNVLLSQDLQGCISDFGLTPLMN----TPTVPSRSAGYRAPEVIETKKPTQ 515
+ I ++K N+ L++DL+ I DFGL + V + Y APEV+ K +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 516 KSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S G ++ +L GK P +
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFET 243
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT--TVVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 17 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 71
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 130
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 184
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 69 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 221
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 121
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 342 EVLGKGSYGTTYKAI---LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+ LG+G+ G A+ EE V + +K V ++++ + ++ H NVV
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVV--- 67
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHG-NRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+Y + E + Y F+E S L IG D + + G+ ++H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH--- 121
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---NTPTVPSRSAG---YRAPEVIETK 511
G +IK N+LL + ISDFGL + N + ++ G Y APE+++ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 512 K-PTQKSDVYSFGVLLLEMLTGKAPIQAP 539
+ + DV+S G++L ML G+ P P
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 75 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 129
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 130 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 227
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 121
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 219
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGK-----REFEQQMEVVGRLSQHPNVVPIR 398
LG G++G + ++EE ++ + + +K + + + E ++EV+ L HPN++ I
Sbjct: 30 LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD-HPNIIKIF 86
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+ +V + E G + + G+ L ++ +A+ H+
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEGYVAELMKQMMNALAYFHSQ-- 143
Query: 459 GKFILGNIKSSNVLLSQDLQGC----ISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK 511
+ ++K N+L QD I DFGL L + + +AG Y APEV + +
Sbjct: 144 -HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-R 200
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV 544
T K D++S GV++ +LTG P E+V
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV 233
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 41/294 (13%)
Query: 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHP 392
+ LG G++G +A + V VK LK K +++++ L QH
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHG------NRGIGRTPLDWESRVKISLGS 446
N+V + L++ ++ G L ++ GR PL+ + S
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQV 161
Query: 447 AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG---- 501
A+G+A + + I ++ + NVLL+ I DFGL +MN +
Sbjct: 162 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 502 -YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEW 559
+ APE I T +SDV+S+G+LL E+ + G P PG +V ++
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--PG------------ILVNSKF 264
Query: 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
V D M + + I +C A P RPT +++ +++ D
Sbjct: 265 YKLVKDGYQMAQPAFAPK--NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 316
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 344 LGKGSYGT---TYKAILEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVP 396
+G G+YG+ Y A L + V VK+L + ++ +R + +++ ++ L +H NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTY-RELRLLKHL-KHENVIG 91
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHG--NRGIGRTPLDWESRVKISLGSAKGIAHIH 454
+ + + DF E + L+ N + L E + +G+ +IH
Sbjct: 92 LLDVFTPATS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRAPEV-IET 510
+A I ++K SNV +++D + I DFGL + T V +R YRAPE+ +
Sbjct: 149 SA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR--WYRAPEIMLNW 203
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
Q D++S G ++ E+L GKA PG + + L R ++ V
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVV 245
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT--TVVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 15 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARRE----VELHWRASQCP 69
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAI 128
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTEPCYTPY 182
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 83 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 134
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 195 SFGVLMWEAFSYGQKPYRG 213
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 154
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 155 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 215 SFGVLMWEAFSYGQKPYRG 233
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 154
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 155 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 215 SFGVLMWEAFSYGQKPYRG 233
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLSFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 75 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 129
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 130 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 187
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 227
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 138
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTP--TVPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 139 ARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 199 SFGVLMWEAFSYGQKPYRG 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 144
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 145 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 205 SFGVLMWEAFSYGQKPYRG 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 81 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 132
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 133 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 192
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 193 SFGVLMWEAFSYGQKPYRG 211
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 138
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 139 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 199 SFGVLMWEAFSYGQKPYRG 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQ-MEV-VGRLSQHPNVVPIRA 399
LGKG + ++ + V ++ K +++ + E+ ME+ + R H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGG 459
++ D +V + S L H R P +I LG ++H
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 136
Query: 460 KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVIETKKPTQ 515
+ I ++K N+ L++DL+ I DFGL + ++ Y APEV+ K +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 516 KSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S G ++ +L GK P +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFET 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPN-VVP 396
LGKG++G+ Y + + G V VK+L+ + R+F+++++++ L H + +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIVK 75
Query: 397 IR--AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
R +Y + LV +++ +G L +R LD + S KG+ ++
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG 131
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEV 507
+ + + ++ + N+L+ + I+DFGL L+ + R G + APE
Sbjct: 132 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT 531
+ +++SDV+SFGV+L E+ T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQ-MEV-VGRLSQHPNVVPIRA 399
LGKG + ++ + V ++ K +++ + E+ ME+ + R H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGG 459
++ D +V + S L H R P +I LG ++H
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 136
Query: 460 KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVIETKKPTQ 515
+ I ++K N+ L++DL+ I DFGL + ++ Y APEV+ K +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 516 KSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S G ++ +L GK P +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFET 219
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 101 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 152
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 153 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 213 SFGVLMWEAFSYGQKPYRG 231
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPN-VVP 396
LGKG++G+ Y + + G V VK+L+ + R+F+++++++ L H + +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIVK 88
Query: 397 IR--AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
R +Y + LV +++ +G L +R LD + S KG+ ++
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG 144
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEV 507
+ + + ++ + N+L+ + I+DFGL L+ + R G + APE
Sbjct: 145 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT 531
+ +++SDV+SFGV+L E+ T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 37/271 (13%)
Query: 284 LKKKDSEGTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN--FDLEDLLRASA 341
LK++D E +A ++ E + A KN L + S++ FD+ D
Sbjct: 7 LKEEDGEDGSAEPPGPVKAEPAH----TAASVAAKN-LALLKARSFDVTFDVGDEYEI-I 60
Query: 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLK---EVVMGKREFEQQMEVVGRLSQHPNVVPI 397
E +G G+YG A G V +K++ +VV + ++++++ +H N++ I
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAI 119
Query: 398 RAY------YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+ Y +V D +E+ ++H ++ PL E +G+
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLK 173
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR--------SAGYR 503
++H+A + I ++K SN+L++++ + I DFG+ + T + + YR
Sbjct: 174 YMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 504 APEV-IETKKPTQKSDVYSFGVLLLEMLTGK 533
APE+ + + TQ D++S G + EML +
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 344 LGKGSYGTT----YKAILEE-GTTVVVKRLKEVVMGK-REFEQQMEVVGRLSQHPN-VVP 396
LGKG++G+ Y + + G V VK+L+ + R+F+++++++ L H + +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIVK 76
Query: 397 IR--AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
R +Y + LV +++ +G L +R LD + S KG+ ++
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG 132
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM--NTPTVPSRSAG-----YRAPEV 507
+ + + ++ + N+L+ + I+DFGL L+ + R G + APE
Sbjct: 133 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 508 IETKKPTQKSDVYSFGVLLLEMLT 531
+ +++SDV+SFGV+L E+ T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 71 LDVIHTENKLYLVFEFLHQ-DLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 223
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 121
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 219
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQ-MEV-VGRLSQHPNVVPIRA 399
LGKG + ++ + V ++ K +++ + E+ ME+ + R H +VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGG 459
++ D +V + S L H R P +I LG ++H
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 140
Query: 460 KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVIETKKPTQ 515
+ I ++K N+ L++DL+ I DFGL + ++ Y APEV+ K +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 516 KSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S G ++ +L GK P +
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFET 223
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 71 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 223
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 70 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 124
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 222
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 121
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 219
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 41/294 (13%)
Query: 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHP 392
+ LG G++G +A + V VK LK K +++++ L QH
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHG------NRGIGRTPLDWESRVKISLGS 446
N+V + L++ ++ G L ++ GR PL+ + S
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQV 169
Query: 447 AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG---- 501
A+G+A + + I ++ + NVLL+ I DFGL +MN +
Sbjct: 170 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 502 -YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEW 559
+ APE I T +SDV+S+G+LL E+ + G P PG +V ++
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--PG------------ILVNSKF 272
Query: 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
V D M + + I +C A P RPT +++ +++ D
Sbjct: 273 YKLVKDGYQMAQPAFAPK--NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 324
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 72 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 126
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 127 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 224
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 69 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 335 DLLRASAEVLGKGSYGTTYKAILEEGT--TVVVKRLKEVVMGKREFEQQMEVVGRLSQHP 392
D + +++VLG G G + I + T +K L++ +RE +E+ R SQ P
Sbjct: 61 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKXLQDCPKARRE----VELHWRASQCP 115
Query: 393 NVVPI----RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAK 448
++V I Y + L+V + ++ G + + +RG S + S+G A
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQ-DRGDQAFTEREASEIXKSIGEAI 174
Query: 449 GIAH----IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAG 501
H H V + +L K N +L ++DFG T N+ T P +
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILK------LTDFGFAKETTSHNSLTTPCYTPY 228
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D +S GV+ +L G P
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 69 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 221
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKR-EFEQQMEVVGRLSQHPNVVPIR 398
+VLG G++ A + +V + K+ + GK E ++ V+ ++ +HPN+V +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVALD 82
Query: 399 AYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
Y S L+ + G F ++ R SR+ + A + ++H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA----SRLIFQVLDA--VKYLHDL- 135
Query: 458 GGKFILGNIKSSNVL---LSQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVIETK 511
+ ++K N+L L +D + ISDFGL+ + + +V S + G Y APEV+ K
Sbjct: 136 --GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 512 KPTQKSDVYSFGVLLLEMLTGKAPI 536
++ D +S GV+ +L G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 69 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 124 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 344 LGKGSYGTTYKAI-LEEGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQHPNVVPIRA 399
+G+GSYG +K + G V +K+ E + K+ +++ ++ +L +HPN+V +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLE 69
Query: 400 YYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGG 459
+ K LV+++ + L RG+ P + A H H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGV---PEHLVKSITWQTLQAVNFCHKHNC--- 123
Query: 460 KFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT------VPSRSAGYRAPE-VIETKK 512
I ++K N+L+++ + DFG L+ P+ V +R YR+PE ++ +
Sbjct: 124 --IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR--WYRSPELLVGDTQ 179
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
DV++ G + E+L+G P+ PG DV L
Sbjct: 180 YGPPVDVWAIGCVFAELLSG-VPL-WPGKSDVDQL 212
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 71 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 223
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 71 LDVIHTENKLYLVFEFLSM-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 126 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 223
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 69 LDVIHTENKLYLVFEFLSM-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 124 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 221
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 70 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 124
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 222
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 70 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 124
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 125 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 71 LDVIHTENKLYLVFEFLSM-DLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 223
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 26/190 (13%)
Query: 434 LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNT 492
L E + S AKG+ + + K I ++ + N+LLS+ I DFGL +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
P + + APE I + T +SDV+SFGVLL E+ + G +P PG +
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK---- 307
Query: 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
+ EE+ + + MR + +M Q + C P RPT E+V +
Sbjct: 308 --------IDEEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
Query: 607 EDIRPSDSEN 616
++ ++++
Sbjct: 358 GNLLQANAQQ 367
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 344 LGKGSYGTTYKAI-LEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVVPIR 398
+G G+YG+ A + G V VK+L + ++ KR + +++ ++ + +H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
F+ L ++ + + N + L + + +G+ +IH+A
Sbjct: 88 DV-FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRAPEV-IETKKPT 514
I ++K SN+ +++D + I DFGL + T V +R YRAPE+ +
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRAPEIMLNWMHYN 201
Query: 515 QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
Q D++S G ++ E+LTG+ H D + L
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 26/189 (13%)
Query: 434 LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNT 492
L E + S AKG+ + + K I ++ + N+LLS+ I DFGL +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
P + + APE I + T +SDV+SFGVLL E+ + G +P PG +
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK---- 300
Query: 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
+ EE+ + + MR + +M Q + C P RPT E+V +
Sbjct: 301 --------IDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHL 350
Query: 607 EDIRPSDSE 615
++ ++++
Sbjct: 351 GNLLQANAQ 359
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 195
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 195
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 135 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 189
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 233
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 37/271 (13%)
Query: 284 LKKKDSEGTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN--FDLEDLLRASA 341
LK++D E +A ++ E + A KN L + S++ FD+ D
Sbjct: 6 LKEEDGEDGSAEPPGPVKAEPAH----TAASVAAKN-LALLKARSFDVTFDVGDEYEI-I 59
Query: 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLK---EVVMGKREFEQQMEVVGRLSQHPNVVPI 397
E +G G+YG A G V +K++ +VV + ++++++ +H N++ I
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAI 118
Query: 398 RAY------YFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+ Y +V D +E+ ++H ++ PL E +G+
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLK 172
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR--------SAGYR 503
++H+A + I ++K SN+L++++ + I DFG+ + T + + YR
Sbjct: 173 YMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 504 APEV-IETKKPTQKSDVYSFGVLLLEMLTGK 533
APE+ + + TQ D++S G + EML +
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--WYRA 195
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--WYRA 195
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 70 LDVIHTENKLYLVFEFLSM-DLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 124
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 222
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 26/190 (13%)
Query: 434 LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNT 492
L E + S AKG+ + + K I ++ + N+LLS+ I DFGL +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
P + + APE I + T +SDV+SFGVLL E+ + G +P PG +
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK---- 305
Query: 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
+ EE+ + + MR + +M Q + C P RPT E+V +
Sbjct: 306 --------IDEEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
Query: 607 EDIRPSDSEN 616
++ ++++
Sbjct: 356 GNLLQANAQQ 365
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 196
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 188
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 197
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 434 LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNT 492
L E + S AKG+ + + K I ++ + N+LLS+ I DFGL +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 493 PTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546
P + + APE I + T +SDV+SFGVLL E+ + G +P PG +
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVK---- 298
Query: 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606
+ EE+ + + MR + +M Q + C P RPT E+V +
Sbjct: 299 --------IDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 192
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 202
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 202
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 186
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--WYRA 201
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 187
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 187
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 213
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 192
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 200
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 244
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 202
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 201
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 196
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 339 ASAEVLGKGSYGTTYKAILEE---GTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNV 394
+ E+LG G +G +K EE G + K +K M K E + ++ V+ +L H N+
Sbjct: 92 SKTEILGGGRFGQVHKC--EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD-HANL 148
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
+ + + SK++ +LV ++++ G F ++ + T LD + +GI H+
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRII--DESYNLTELD---TILFMKQICEGIRHM 203
Query: 454 HAAVGGKFILG-NIKSSNVL-LSQDL-QGCISDFGLTPLMNTPTVPSRSAG---YRAPEV 507
H +IL ++K N+L +++D Q I DFGL + G + APEV
Sbjct: 204 HQM----YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV 259
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ + +D++S GV+ +L+G +P
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 186
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 186
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL T T V +R YRA
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--WYRA 197
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL T T V +R YRA
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--WYRA 197
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 210
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 192
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 209
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 209
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 210
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL T T V +R YRA
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--WYRA 197
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 196
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 35/226 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV---VVKRLKEVVMGKREFE---QQMEVVGRLSQHPNV 394
+VLG G +GT +K + + EG ++ V ++ E G++ F+ M +G L H ++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD-HAHI 77
Query: 395 VPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRG-IG-RTPLDWESRVKISLGSAKGIA 451
V R L LV ++ GS + +RG +G + L+W ++ AKG+
Sbjct: 78 V--RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 129
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---------NTPTVPSRSAGY 502
++ + N+ + NVLL Q ++DFG+ L+ + P + +
Sbjct: 130 YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---W 183
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
A E I K T +SDV+S+GV + E++T G P +V DL
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 229
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 35/226 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV---VVKRLKEVVMGKREFE---QQMEVVGRLSQHPNV 394
+VLG G +GT +K + + EG ++ V ++ E G++ F+ M +G L H ++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD-HAHI 95
Query: 395 VPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRG-IG-RTPLDWESRVKISLGSAKGIA 451
V R L LV ++ GS + +RG +G + L+W ++ AKG+
Sbjct: 96 V--RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 147
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM---------NTPTVPSRSAGY 502
++ + N+ + NVLL Q ++DFG+ L+ + P + +
Sbjct: 148 YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---W 201
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
A E I K T +SDV+S+GV + E++T G P +V DL
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 247
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V + +++ + + + L + HPN+V +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 220
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V + +++ + + + L + HPN+V +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++F+ + + G PL L H H
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 121
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR--WYRA 192
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 80
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 81 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 79
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 80 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR--WYRA 196
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 82
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 83 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 45/238 (18%)
Query: 328 SYNFDLEDLLRASAEVLGKGSYG---TTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEV 384
S++ ED+ + +VLG+G++ T I + V + + + R F +++E+
Sbjct: 5 SFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF-REVEM 63
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ + H NV+ + ++ +D LV++ + GS + +H R S V +
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE---ASVVVQDV 120
Query: 445 GSA------KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC---ISDFGL--------- 486
SA KGIAH ++K N+L Q I DF L
Sbjct: 121 ASALDFLHNKGIAH-----------RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169
Query: 487 -TPLMNTPTV--PSRSAGYRAPEVIETKKP-----TQKSDVYSFGVLLLEMLTGKAPI 536
+P+ +TP + P SA Y APEV+E ++ D++S GV+L +L+G P
Sbjct: 170 CSPI-STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 34/187 (18%)
Query: 366 KRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHG 425
++L+EV R ++ ++ +++ HP+++ + Y S LV+D + G L
Sbjct: 137 EQLEEVREATR---RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-- 191
Query: 426 NRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG 485
+ L + I + ++ +HA + ++K N+LL ++Q +SDFG
Sbjct: 192 ---TEKVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFG 245
Query: 486 ----------LTPLMNTPTVPSRSAGYRAPEVI-----ETKKPTQKS-DVYSFGVLLLEM 529
L L TP GY APE++ ET K D+++ GV+L +
Sbjct: 246 FSCHLEPGEKLRELCGTP-------GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 530 LTGKAPI 536
L G P
Sbjct: 299 LAGSPPF 305
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 81
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 82 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
E LGKG++ + + +E +++ K ++ E++ + RL +HPN+V +
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC-RLLKHPNIVRL 75
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ L++D + G + + R + + H H
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQM- 129
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVP----SRSAGYRAPEVIET 510
+ N+K N+LL+ L+G ++DFGL + + + GY +PEV+
Sbjct: 130 --GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ D+++ GV+L +L G P
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 344 LGKGSYGTTYKAI-LEEGTTVVVKRL----KEVVMGKREFEQQMEVVGRLSQHPNVV--- 395
+G G+YG+ A + G V VK+L + ++ KR + +++ ++ + +H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHM-KHENVIGLL 87
Query: 396 ----PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGI 450
P R+ D L+ + + + ++ + + V+ + +G+
Sbjct: 88 DVFTPARSLEEFNDVYLVTH--LMGADLNNIVKSQKLT-------DDHVQFLIYQILRGL 138
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL---TPLMNTPTVPSRSAGYRAPEV 507
+IH+A I ++K SN+ +++D + I DFGL T T V +R YRAPE+
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR--WYRAPEI 193
Query: 508 -IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
+ Q D++S G ++ E+LTG+ H D + L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 16/187 (8%)
Query: 359 EGTTVVVKRLK---EVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS--KDEKLLVYDF 413
+G +VVK LK R+F ++ + R+ HPNV+P+ S L+ +
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRL-RIFSHPNVLPVLGACQSPPAPHPTLITHW 90
Query: 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL 473
GS +LH +D VK +L A+G A +H + + S +V +
Sbjct: 91 XPYGSLYNVLHEGTNFV---VDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXI 146
Query: 474 SQDLQGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETKKPT----QKSDVYSFGVLLLEM 529
+D IS + +P + + APE ++ KKP + +D +SF VLL E+
Sbjct: 147 DEDXTARISXADVKFSFQSPGR-XYAPAWVAPEALQ-KKPEDTNRRSADXWSFAVLLWEL 204
Query: 530 LTGKAPI 536
+T + P
Sbjct: 205 VTREVPF 211
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++ + + + G PL L H H
Sbjct: 67 LDVIHTENKLYLVFEHVHQ-DLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 121
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P T + YRAPE+ + K
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 219
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 83
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 84 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQME--VVGRLSQHPNVVP 396
LGKG + Y+ + V ++ K +++ + E+ + + +P+VV
Sbjct: 31 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKISLGSAKGIAHIH 454
++ D VY +E +LL H R P E+R + + +G+ ++H
Sbjct: 91 FHGFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEP---EARYFMR-QTIQGVQYLH 143
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVIET 510
+ I ++K N+ L+ D+ I DFGL + + + Y APEV+
Sbjct: 144 ---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPIQA 538
K + + D++S G +L +L GK P +
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPPFET 228
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRA 504
G+ H+H I ++K NVLL D ISD GL + ++ + G+ A
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
PE++ ++ D ++ GV L EM+ + P +A G +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRA 504
G+ H+H I ++K NVLL D ISD GL + ++ + G+ A
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
PE++ ++ D ++ GV L EM+ + P +A G +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I D+GL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRA 504
G+ H+H I ++K NVLL D ISD GL + ++ + G+ A
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
PE++ ++ D ++ GV L EM+ + P +A G +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 80
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 81 CRLLGICLTSTVQLI----MQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQME--VVGRLSQHPNVVPIRA 399
LGKG + Y+ + V ++ K +++ + E+ + + +P+VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 400 YYFSKDEKLLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++ D VY +E +LL H R P E+R + + +G+ ++H
Sbjct: 110 FFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEP---EARYFMR-QTIQGVQYLH--- 159
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVIETKKP 513
+ I ++K N+ L+ D+ I DFGL + + + Y APEV+ K
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 514 TQKSDVYSFGVLLLEMLTGKAPIQA 538
+ + D++S G +L +L GK P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 445 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 496
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 497 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 556
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 557 SFGVLMWEAFSYGQKPYRG 575
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 408 LLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467
+LV + E G + L NR + + +++ + G+ ++ + F+ ++
Sbjct: 446 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEES---NFVHRDLA 497
Query: 468 SSNVLLSQDLQGCISDFGLTPLMNTPT--VPSRSAG-----YRAPEVIETKKPTQKSDVY 520
+ NVLL ISDFGL+ + +++ G + APE I K + KSDV+
Sbjct: 498 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 557
Query: 521 SFGVLLLEMLT-GKAPIQA 538
SFGVL+ E + G+ P +
Sbjct: 558 SFGVLMWEAFSYGQKPYRG 576
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 73
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 74 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 123
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 124 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
E I + T +SDV+S+GV + E++T G P
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 82
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 83 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 449 GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRA 504
G+ H+H I ++K NVLL D ISD GL + ++ + G+ A
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
PE++ ++ D ++ GV L EM+ + P +A G +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQME--VVGRLSQHPNVVPIRA 399
LGKG + Y+ + V ++ K +++ + E+ + + +P+VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 400 YYFSKDEKLLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++ D VY +E +LL H R P E+R + + +G+ ++H
Sbjct: 110 FFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEP---EARYFMR-QTIQGVQYLH--- 159
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS----AGYRAPEVIETKKP 513
+ I ++K N+ L+ D+ I DFGL + ++ Y APEV+ K
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 514 TQKSDVYSFGVLLLEMLTGKAPIQA 538
+ + D++S G +L +L GK P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 89
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 90 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 139
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 79
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 80 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 104
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 105 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 154
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 85
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 86 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 135
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 82
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 83 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRL--KEVVMGKREFEQQME--VVGRLSQHPNVVPIRA 399
LGKG + Y+ + V ++ K +++ + E+ + + +P+VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 400 YYFSKDEKLLVYDFIEAGSFSALL--HGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++ D VY +E +LL H R P E+R + + +G+ ++H
Sbjct: 110 FFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEP---EARYFMR-QTIQGVQYLH--- 159
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVIETKKP 513
+ I ++K N+ L+ D+ I DFGL + + + Y APEV+ K
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 514 TQKSDVYSFGVLLLEMLTGKAPIQA 538
+ + D++S G +L +L GK P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 81
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 82 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT---VPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + V +R YRA
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR--WYRA 213
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 79
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 80 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 82
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 83 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT---VPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 86
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 87 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT---VPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 114/296 (38%), Gaps = 41/296 (13%)
Query: 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHP 392
+ LG G++G +A + V VK LK K +++++ L QH
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
N+V + L++ ++ G L + T D + S S + + H
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET--DPAFAIANSTASTRDLLH 168
Query: 453 IHAAV--GGKF------ILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-- 501
+ V G F I ++ + NVLL+ I DFGL +MN +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 502 ---YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVRE 557
+ APE I T +SDV+S+G+LL E+ + G P PG +V
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--PG------------ILVNS 274
Query: 558 EWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
++ V D M + + I +C A P RPT +++ +++ D
Sbjct: 275 KFYKLVKDGYQMAQPAFAPK--NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT---VPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + V +R YRA
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR--WYRA 186
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---TVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + V +R YRA
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR--WYRA 210
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HPNVVPI 397
E +G+G+YG YKA + G V +K+++ + + + L + HPN+V +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++++ LV++ ++ + + G PL L H H
Sbjct: 71 LDVIHTENKLYLVFEHVDQ-DLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEV-IETKK 512
+ + ++K N+L++ + ++DFGL P + YRAPE+ + K
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV 554
+ D++S G + EM+T +A PG ++ L R +++
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFRIFRTL 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 79
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 80 CRLLGICLTSTVQLIT----QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 337 LRASAE------VLGKGSYGTTYKAILEEGTTVV--VKRLKEVVMGKRE----FEQQMEV 384
LR AE V+G+G++G + + + T V +K L + M KR F ++ ++
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKIS 443
+ + P VV + Y F D L +V +++ G L+ + + + V ++
Sbjct: 123 MA-FANSPWVVQL-FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 180
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-----TVPSR 498
L + + IH ++K N+LL + ++DFG MN
Sbjct: 181 LDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 231
Query: 499 SAGYRAPEVIETKKPT----QKSDVYSFGVLLLEMLTGKAPIQA 538
+ Y +PEV++++ ++ D +S GV L EML G P A
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 337 LRASAE------VLGKGSYGTTYKAILEEGTTVV--VKRLKEVVMGKRE----FEQQMEV 384
LR AE V+G+G++G + + + T V +K L + M KR F ++ ++
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKIS 443
+ + P VV + Y F D L +V +++ G L+ + + + V ++
Sbjct: 128 MA-FANSPWVVQL-FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-----TVPSR 498
L + + IH ++K N+LL + ++DFG MN
Sbjct: 186 LDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 499 SAGYRAPEVIETKKPT----QKSDVYSFGVLLLEMLTGKAPIQA 538
+ Y +PEV++++ ++ D +S GV L EML G P A
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 343 VLGKGSYGTTYKAILE----EGTTVVVKRLK-EVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+LG+G +G Y+ + E V VK K + + +E V+ + HP++V +
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++ ++ + G L N+ L + V SL K +A++ +
Sbjct: 75 IGI-IEEEPTWIIMELYPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESI- 128
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN-----TPTVPSRSAGYRAPEVIETKK 512
+ +I N+L++ + DFGL+ + +V + +PE I ++
Sbjct: 129 --NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 513 PTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T SDV+ F V + E+L+ GK P ++DV+
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 337 LRASAE------VLGKGSYGTTYKAILEEGTTVV--VKRLKEVVMGKRE----FEQQMEV 384
LR AE V+G+G++G + + + T V +K L + M KR F ++ ++
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKIS 443
+ + P VV + Y F D L +V +++ G L+ + + + V ++
Sbjct: 128 MA-FANSPWVVQL-FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-----TVPSR 498
L + + IH ++K N+LL + ++DFG MN
Sbjct: 186 LDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 499 SAGYRAPEVIETKKPT----QKSDVYSFGVLLLEMLTGKAPIQA 538
+ Y +PEV++++ ++ D +S GV L EML G P A
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 113/297 (38%), Gaps = 43/297 (14%)
Query: 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHP 392
+ LG G++G +A + V VK LK K +++++ L QH
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNR---------GIGRTPLDWESRVKIS 443
N+V + L++ ++ G L I + L + S
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 444 LGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSAG- 501
A+G+A + + I ++ + NVLL+ I DFGL +MN +
Sbjct: 171 SQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 502 ----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556
+ APE I T +SDV+S+G+LL E+ + G P PG +V
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--PG------------ILVN 273
Query: 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
++ V D M + + I +C A P RPT +++ +++ D
Sbjct: 274 SKFYKLVKDGYQMAQPAFAPK--NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 343 VLGKGSYGTTYKAILE----EGTTVVVKRLK-EVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+LG+G +G Y+ + E V VK K + + +E V+ + HP++V +
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++ ++ + G L N+ L + V SL K +A++ +
Sbjct: 91 IGI-IEEEPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI- 144
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN-----TPTVPSRSAGYRAPEVIETKK 512
+ +I N+L++ + DFGL+ + +V + +PE I ++
Sbjct: 145 --NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 513 PTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T SDV+ F V + E+L+ GK P ++DV+
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 343 VLGKGSYGTTYKAILE----EGTTVVVKRLK-EVVMGKREFEQQMEVVGRLSQHPNVVPI 397
+LG+G +G Y+ + E V VK K + + +E V+ + HP++V +
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++ ++ + G L N+ L + V SL K +A++ +
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI- 132
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN-----TPTVPSRSAGYRAPEVIETKK 512
+ +I N+L++ + DFGL+ + +V + +PE I ++
Sbjct: 133 --NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 513 PTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVV 545
T SDV+ F V + E+L+ GK P ++DV+
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 20/206 (9%)
Query: 342 EVLGKGSYGTTYKAI----LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
E LGKG++ + + +E ++ K ++ E++ + RL +HPN+V +
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARIC-RLLKHPNIVRL 95
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ LV+D + G + + R + + HIH
Sbjct: 96 HDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIHQILESVNHIHQH- 149
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVP----SRSAGYRAPEVIET 510
+ ++K N+LL+ +G ++DFGL + + + GY +PEV+
Sbjct: 150 --DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ D+++ GV+L +L G P
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 342 EVLGKGSYGTTYKAILEE---GTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
E LG G++ + EE G VK + K+ + GK + V R +H N+V +
Sbjct: 28 ETLGTGAFSEV--VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 398 RAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
Y S + LV + G F ++ +G T D + ++ L + + ++H
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIV--EKGF-YTEKDASTLIRQVLDA---VYYLHRM 139
Query: 457 VGGKFILGNIKSSNVLL-SQDLQG--CISDFGLTPLMNTPTVPSRSAG---YRAPEVIET 510
+ ++K N+L SQD + ISDFGL+ + V S + G Y APEV+
Sbjct: 140 ---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPI 536
K ++ D +S GV+ +L G P
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 122/305 (40%), Gaps = 48/305 (15%)
Query: 341 AEVLGKGSYG-----TTYKAILEEGT-TVVVKRLK-EVVMGKRE-FEQQMEVVGRLSQHP 392
+ LG G++G T Y I + TV VK LK + +RE +++V+ L H
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 87
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRG-------------IGRTPLDWESR 439
N+V + L++ ++ G L R LD E
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSR 498
+ S AKG+A + + I ++ + N+LL+ I DFGL + N +
Sbjct: 148 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 499 SAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
+ APE I T +SDV+S+G+ L E+ + G +P PG + ++
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIK 262
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
E R + E +M I +C P RPT +++V++IE + S
Sbjct: 263 --------------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK-QIS 307
Query: 613 DSENQ 617
+S N
Sbjct: 308 ESTNH 312
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 342 EVLGKGSYGTTYKA--ILEEGTTVVVKRLKEVVMGKREFEQQMEVVG--RLSQHPNVVPI 397
+ +GKG++ A IL G V VK + + + ++ V ++ HPN+V +
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
++ LV ++ G L + GR + E+R K + + H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFR-QIVSAVQYCHQ-- 131
Query: 458 GGKFILG-NIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSAGYRAPEVIETKK- 512
KFI+ ++K+ N+LL D+ I+DFG + N S Y APE+ + KK
Sbjct: 132 --KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 513 PTQKSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S GV+L +++G P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 342 EVLGKGSYGTTYKA--ILEEGTTVVVKRLKEVVMGKREFEQQMEVVG--RLSQHPNVVPI 397
+ +GKG++ A IL G V VK + + + ++ V ++ HPN+V +
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI-SLGSAKGIAHIHAA 456
++ LV ++ G L + GR + E+R K + SA H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQIVSAVQYCH---- 130
Query: 457 VGGKFILG-NIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSAGYRAPEVIETKK 512
KFI+ ++K+ N+LL D+ I+DFG + N S Y APE+ + KK
Sbjct: 131 --QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 513 -PTQKSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S GV+L +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 76
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ A+G
Sbjct: 77 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEG 126
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DF L + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 83
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 84 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFG L+ + G + P
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 41/288 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPN 393
E LG GS+G + + + +V VK LK V+ + E F +++ + L H N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRN 76
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
++ + + K+ V + GS L ++G L SR + + A+G+ ++
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQV--AEGMGYL 131
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSA----GYRAPE 506
+ +FI ++ + N+LL+ I DFGL P + V + APE
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565
++T+ + SD + FGV L EM T G+ P ++ D
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----------------HKID 232
Query: 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
E R E+ + + + C A P+ RPT + + + +P+D
Sbjct: 233 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 280
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I FGL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 118/306 (38%), Gaps = 52/306 (16%)
Query: 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHP 392
+ LG G++G +A + V VK LK K +++++ L QH
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSF--------SALLHGNRGIGRTP----------L 434
N+V + L++ ++ G A+L + G+ P L
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 435 DWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTP 493
+ + S A+G+A + + I ++ + NVLL+ I DFGL +MN
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 494 TVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
+ + APE I T +SDV+S+G+LL E+ + G P PG
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--PG------- 263
Query: 548 PRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIE 607
+V ++ V D M + + I +C A P RPT +++ ++
Sbjct: 264 -----ILVNSKFYKLVKDGYQMAQPAFAPK--NIYSIMQACWALEPTHRPTFQQICSFLQ 316
Query: 608 DIRPSD 613
+ D
Sbjct: 317 EQAQED 322
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 81
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 82 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFG L+ + G + P
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 333 LEDLLRASAEVLGKGSYGTTYKAILEEGTT--VVVKRLKEVVMGKREFEQQMEVVGRLSQ 390
L D +E LG+G+ Y+ ++GT +K LK+ V K+ ++ V+ RLS
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRC-KQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLS- 106
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKG 449
HPN++ ++ + + E LV + + G F ++ R D ++ +
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEA 160
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQ---DLQGCISDFGLTPLMNTPTVPSR---SAGYR 503
+A++H + ++K N+L + D I+DFGL+ ++ + + GY
Sbjct: 161 VAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYC 217
Query: 504 APEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
APE++ + D++S G++ +L G P
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 81
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 82 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFG L+ + G + P
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 41/288 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPN 393
E LG GS+G + + + +V VK LK V+ + E F +++ + L H N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRN 82
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
++ + + K+ V + GS L ++G L SR + + A+G+ ++
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQV--AEGMGYL 137
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSA----GYRAPE 506
+ +FI ++ + N+LL+ I DFGL P + V + APE
Sbjct: 138 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565
++T+ + SD + FGV L EM T G+ P ++ D
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----------------HKID 238
Query: 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
E R E+ + + + C A P+ RPT + + + +P+D
Sbjct: 239 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VL G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 86
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ ++ F LL H + + L+W ++ AKG
Sbjct: 87 CRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I D GL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ ++ HPN+V + ++ LV ++ G L + GR + E+R K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFR- 120
Query: 445 GSAKGIAHIHAAVGGKFILG-NIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSA 500
+ + H KFI+ ++K+ N+LL D+ I+DFG + N S
Sbjct: 121 QIVSAVQYCHQ----KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 501 GYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQA 538
Y APE+ + KK + DV+S GV+L +++G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 122/305 (40%), Gaps = 48/305 (15%)
Query: 341 AEVLGKGSYG-----TTYKAILEEGT-TVVVKRLK-EVVMGKRE-FEQQMEVVGRLSQHP 392
+ LG G++G T Y I + TV VK LK + +RE +++V+ L H
Sbjct: 44 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 103
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRG-------------IGRTPLDWESR 439
N+V + L++ ++ G L R LD E
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSR 498
+ S AKG+A + + I ++ + N+LL+ I DFGL + N +
Sbjct: 164 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 499 SAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
+ APE I T +SDV+S+G+ L E+ + G +P PG + ++
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIK 278
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
E R + E +M I +C P RPT +++V++IE + S
Sbjct: 279 --------------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK-QIS 323
Query: 613 DSENQ 617
+S N
Sbjct: 324 ESTNH 328
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 41/288 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPN 393
E LG GS+G + + + +V VK LK V+ + E F +++ + L H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRN 72
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
++ + + K+ V + GS L ++G L SR + + A+G+ ++
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQV--AEGMGYL 127
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSA----GYRAPE 506
+ +FI ++ + N+LL+ I DFGL P + V + APE
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565
++T+ + SD + FGV L EM T G+ P ++ D
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----------------HKID 228
Query: 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
E R E+ + + + C A P+ RPT + + + +P+D
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 276
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 45/299 (15%)
Query: 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHP 392
+ LG G++G +A + V VK LK K +++++ L QH
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIG-----------RTPLDWESRVK 441
N+V + L++ ++ G L R G L +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 442 ISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSRSA 500
S A+G+A + + I ++ + NVLL+ I DFGL +MN +
Sbjct: 171 FSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 501 G-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSV 554
+ APE I T +SDV+S+G+LL E+ + G P PG +
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--PG------------IL 273
Query: 555 VREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
V ++ V D M + + I +C A P RPT +++ +++ D
Sbjct: 274 VNSKFYKLVKDGYQMAQPAFAPK--NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 330
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 121/305 (39%), Gaps = 48/305 (15%)
Query: 341 AEVLGKGSYG-----TTYKAILEEGT-TVVVKRLK-EVVMGKRE-FEQQMEVVGRLSQHP 392
+ LG G++G T Y I + TV VK LK + +RE +++V+ L H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRG-------------IGRTPLDWESR 439
N+V + L++ ++ G L R LD E
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRS 499
+ S AKG+A + + I ++ + N+LL+ I DFGL + +
Sbjct: 171 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 500 AGYR------APEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
R APE I T +SDV+S+G+ L E+ + G +P PG + ++
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIK 285
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
E R + E +M I +C P RPT +++V++IE + S
Sbjct: 286 --------------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK-QIS 330
Query: 613 DSENQ 617
+S N
Sbjct: 331 ESTNH 335
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I D GL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 20/206 (9%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
E LGKG++ + + +E ++ K ++ E++ + RL +HPN+V +
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARIC-RLLKHPNIVRL 86
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ L++D + G + + R + + H H
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQM- 140
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVP----SRSAGYRAPEVIET 510
+ ++K N+LL+ L+G ++DFGL + + + GY +PEV+
Sbjct: 141 --GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ D+++ GV+L +L G P
Sbjct: 199 DPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 122/305 (40%), Gaps = 48/305 (15%)
Query: 341 AEVLGKGSYG-----TTYKAILEEGT-TVVVKRLK-EVVMGKRE-FEQQMEVVGRLSQHP 392
+ LG G++G T Y I + TV VK LK + +RE +++V+ L H
Sbjct: 46 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 105
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRG-------------IGRTPLDWESR 439
N+V + L++ ++ G L R LD E
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSR 498
+ S AKG+A + + I ++ + N+LL+ I DFGL + N +
Sbjct: 166 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 499 SAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
+ APE I T +SDV+S+G+ L E+ + G +P PG + ++
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIK 280
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
E R + E +M I +C P RPT +++V++IE + S
Sbjct: 281 --------------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK-QIS 325
Query: 613 DSENQ 617
+S N
Sbjct: 326 ESTNH 330
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 41/288 (14%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPN 393
E LG GS+G + + + +V VK LK V+ + E F +++ + L H N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRN 82
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
++ + + K+ V + GS L ++G L SR + + A+G+ ++
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQV--AEGMGYL 137
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSA----GYRAPE 506
+ +FI ++ + N+LL+ I DFGL P + V + APE
Sbjct: 138 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565
++T+ + SD + FGV L EM T G+ P ++ D
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----------------HKID 238
Query: 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613
E R E+ + + + C A P+ RPT + + + +P+D
Sbjct: 239 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 79
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 80 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFG L+ + G + P
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 192 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 192 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 322 VFFEGCSYNF----------DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTT 362
++F+G + N+ DL+++ R + + LG G++G Y+ +
Sbjct: 18 LYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ 77
Query: 363 VVVKRLKEVVMGKREFEQQME--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420
V VK L EV + E + ME ++ +L+ H N+V + ++ + + G
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 421 ALLHGNRGIGRTP--LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ 478
+ L R P L + ++ A G ++ FI +I + N LL+
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGP 193
Query: 479 G---CISDFGLTPLMNTPTVPSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLE 528
G I DFG+ + + R G + PE T K+D +SFGVLL E
Sbjct: 194 GRVAKIGDFGMARDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 529 MLT-GKAPIQAPGHEDVVDL 547
+ + G P + +++V++
Sbjct: 253 IFSLGYMPYPSKSNQEVLEF 272
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 196 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 200 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 192 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 122/305 (40%), Gaps = 48/305 (15%)
Query: 341 AEVLGKGSYG-----TTYKAILEEGT-TVVVKRLK-EVVMGKRE-FEQQMEVVGRLSQHP 392
+ LG G++G T Y I + TV VK LK + +RE +++V+ L H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRG-------------IGRTPLDWESR 439
N+V + L++ ++ G L R LD E
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-PLMNTPTVPSR 498
+ S AKG+A + + I ++ + N+LL+ I DFGL + N +
Sbjct: 171 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 499 SAG-----YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552
+ APE I T +SDV+S+G+ L E+ + G +P PG + ++
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIK 285
Query: 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612
E R + E +M I +C P RPT +++V++IE + S
Sbjct: 286 --------------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK-QIS 330
Query: 613 DSENQ 617
+S N
Sbjct: 331 ESTNH 335
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI-S 443
+ ++ HPN+V + ++ LV ++ G L + GR + E+R K
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQ 122
Query: 444 LGSAKGIAHIHAAVGGKFILG-NIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR---- 498
+ SA H K+I+ ++K+ N+LL D+ I+DFG + N TV ++
Sbjct: 123 IVSAVQYCH------QKYIVHRDLKAENLLLDGDMNIKIADFGFS---NEFTVGNKLDTF 173
Query: 499 --SAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQA 538
S Y APE+ + KK + DV+S GV+L +++G P
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 196 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 194 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VL G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 79
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 80 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 81
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 82 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFG L+ + G + P
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 194 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 192 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 190 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 197 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 192 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 198 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 189 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 196 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 196 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 86
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 87 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFG L+ + G + P
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 342 EVLGKGSYGTTYKA--ILEEGTTVVVKRLKEVVMGKREFEQQMEVVG--RLSQHPNVVPI 397
+ +GKG++ A IL G V VK + + + ++ V ++ HPN+V +
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI-SLGSAKGIAHIHAA 456
++ LV ++ G L + GR + E+R K + SA H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQIVSAVQYCH---- 130
Query: 457 VGGKFILG-NIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSAGYRAPEVIETKK 512
KFI+ ++K+ N+LL D+ I+DFG + N + Y APE+ + KK
Sbjct: 131 --QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 513 -PTQKSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S GV+L +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 190 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 196 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 342 EVLGKGSYGTTYKA--ILEEGTTVVVKRLKEVVMGKREFEQQMEVVG--RLSQHPNVVPI 397
+ +GKG++ A IL G V VK + + + ++ V ++ HPN+V +
Sbjct: 13 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 398 RAYYFSKDEKLLVYDFIEAGS-FSALL-HGNRGIGRTPLDW----ESRVKI-SLGSAKGI 450
++ LV ++ G F L+ HG W E+R K + SA
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHG----------WMKEKEARAKFRQIVSAVQY 121
Query: 451 AHIHAAVGGKFILG-NIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSAGYRAPE 506
H KFI+ ++K+ N+LL D+ I+DFG + N S Y APE
Sbjct: 122 CH------QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 175
Query: 507 VIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQA 538
+ + KK + DV+S GV+L +++G P
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VLG G++GT YK + + EG V + L+E K +E + V+ + +P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD-NPHV 113
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 114 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 163
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 164 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTV----VVKRLKEVVMGK--REFEQQMEVVGRLSQHPNV 394
+VL G++GT YK + + EG V +K L+E K +E + V+ + +P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHV 86
Query: 395 VPIRAYYFSKDEKLLVYDFIEAGSFSALL-----HGNRGIGRTPLDWESRVKISLGSAKG 449
+ + +L+ + F LL H + + L+W ++ AKG
Sbjct: 87 CRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAP---- 505
+ ++ + + ++ + NVL+ I+DFGL L+ + G + P
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 506 --EVIETKKPTQKSDVYSFGVLLLEMLT 531
E I + T +SDV+S+GV + E++T
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 212 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + T V +R
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 212 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I D GL + T V +R YRA
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR--WYRA 190
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE+ + Q D++S G ++ E+LTG+ H D + L
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---TPTVPSRSAGYRA 504
+G+ +IH+A I ++K SN+ +++D + I DFGL + T V +R YRA
Sbjct: 165 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--WYRA 219
Query: 505 PEV-IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGH 541
PE+ + D++S G ++ E+LTG+ H
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDH 257
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI-S 443
+ ++ HPN+V + ++ LV ++ G L + GR + E+R K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQ 121
Query: 444 LGSAKGIAHIHAAVGGKFILG-NIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR---- 498
+ SA H KFI+ ++K+ N+LL D+ I+DFG + N T ++
Sbjct: 122 IVSAVQYCH------QKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDEF 172
Query: 499 --SAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQA 538
S Y APE+ + KK + DV+S GV+L +++G P
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 44/268 (16%)
Query: 279 IAFCCLKKKDSEGTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLR 338
I F L K +G G N +D GS VQ V + +Y +++
Sbjct: 58 IYFLGLNAKKRQGMTG----GPNNGGYDDDQGSYVQ-------VPHDHVAYRYEV----- 101
Query: 339 ASAEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP----- 392
+V+GKGS+G KA + V +K ++ R+ +++ ++ L +
Sbjct: 102 --LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
NV+ + + ++ + ++ + + L+ N+ G SL + AH
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYE-LIKKNKFQG-----------FSLPLVRKFAH 207
Query: 453 -----IHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMNTPTVPS-RSAGYRA 504
+ A + I ++K N+LL Q + I DFG + + +S YRA
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRA 267
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTG 532
PEVI + D++S G +L E+LTG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREF--EQQMEVVGRLS--QHPNVVP 396
+ LG+G +G ++A + + +KR++ + RE E+ M V L+ +HP +V
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIR---LPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 397 IRAYYFSKD--EKLL-----VYDFIEAGSFSALLHGNRGIGRTPLDWESR---VKISLGS 446
+ K+ EKL VY +I+ + GR ++ R + I L
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 447 AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPT-VP 496
A+ + +H+ + ++K SN+ + D + DFGL M+ TP
Sbjct: 128 AEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 497 SRSAG------YRAPEVIETKKPTQKSDVYSFGVLLLEML 530
+R G Y +PE I + K D++S G++L E+L
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 44/268 (16%)
Query: 279 IAFCCLKKKDSEGTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLR 338
I F L K +G G N +D GS VQ V + +Y +++
Sbjct: 58 IYFLGLNAKKRQGMTG----GPNNGGYDDDQGSYVQ-------VPHDHVAYRYEV----- 101
Query: 339 ASAEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP----- 392
+V+GKGS+G KA + V +K ++ R+ +++ ++ L +
Sbjct: 102 --LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
NV+ + + ++ + ++ + + L+ N+ G SL + AH
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYE-LIKKNKFQG-----------FSLPLVRKFAH 207
Query: 453 -----IHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMNTPTVPS-RSAGYRA 504
+ A + I ++K N+LL Q + I DFG + + +S YRA
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRA 267
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTG 532
PEVI + D++S G +L E+LTG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+L++ I DFGL + + T V +R
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 212 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ ++ HPN+V + ++ L+ ++ G L + GR + E+R K
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMK-EKEARSKFR- 118
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------ 498
+ ++ + + + ++K+ N+LL D+ I+DFG + N TV +
Sbjct: 119 ---QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDTFCG 172
Query: 499 SAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQA 538
S Y APE+ + KK + DV+S GV+L +++G P
Sbjct: 173 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 19/98 (19%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLL--SQDLQGCISDFGLTPLMN---------TPTVP 496
+G+ +IH+A + ++K SN+LL + DL+ C DFGL + + T V
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKIC--DFGLARVADPDHDHTGFLTEYVA 191
Query: 497 SRSAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
+R YRAPE++ K KS D++S G +L EML+ +
Sbjct: 192 TR--WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 14/251 (5%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKL 408
+E G +K L K+ V+ +E E + R+ Q N + FS +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE-KRILQAVNFPFLVKLEFSFKDNS 114
Query: 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKS 468
+Y +E + R IGR S +A+ + I ++K
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 469 SNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGVLLL 527
N+++ Q ++DFGL + T + Y APE+I +K + D ++ GVL+
Sbjct: 170 ENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 528 EMLTGKAPIQA 538
EM G P A
Sbjct: 230 EMAAGYPPFFA 240
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ +L+ H N+V + ++ + + G + L R P L
Sbjct: 84 EALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 143 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 200 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 258
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 14/251 (5%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKL 408
+E G +K L K+ V+ +E E + R+ Q N + FS +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE-KRILQAVNFPFLVKLEFSFKDNS 114
Query: 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKS 468
+Y +E + R IGR S +A+ + I ++K
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 469 SNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGVLLL 527
N+++ Q ++DFGL + T + Y APE+I +K + D ++ GVL+
Sbjct: 170 ENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 528 EMLTGKAPIQA 538
EM G P A
Sbjct: 230 EMAAGYPPFFA 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 39/260 (15%)
Query: 322 VFFEGCSYNF----------DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTT 362
++F+G + N+ DL+++ R + + LG G++G Y+ +
Sbjct: 18 LYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ 77
Query: 363 VVVKRLKEVVMGKREFEQQME--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420
V VK L EV + E + ME ++ + + H N+V + ++ + + G
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLK 136
Query: 421 ALLHGNRGIGRTP--LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ 478
+ L R P L + ++ A G ++ FI +I + N LL+
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGP 193
Query: 479 G---CISDFGLTPLMNTPTVPSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLE 528
G I DFG+ + + R G + PE T K+D +SFGVLL E
Sbjct: 194 GRVAKIGDFGMARDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 529 MLT-GKAPIQAPGHEDVVDL 547
+ + G P + +++V++
Sbjct: 253 IFSLGYMPYPSKSNQEVLEF 272
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 50/223 (22%)
Query: 342 EVLGKGSYGT-TYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAY 400
+VLG G+ GT Y+ + + V + L E +++++++ +HPNV IR +
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA---DREVQLLRESDEHPNV--IRYF 84
Query: 401 YFSKDEKL----------LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
KD + + +++E F+ L G P + + + G+
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQKDFAHL-------GLEP------ITLLQQTTSGL 131
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQ-----DLQGCISDFGLTPLM--------NTPTVPS 497
AH+H+ + ++K N+L+S ++ ISDFGL + VP
Sbjct: 132 AHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG 188
Query: 498 RSAGYRAPEVIE---TKKPTQKSDVYSFGVLLLEMLT-GKAPI 536
+ G+ APE++ + PT D++S G + +++ G P
Sbjct: 189 -TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 345 GKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS--QHPNVVPIRAYYF 402
G+G++GT + +E +T + +K+V+ R ++++++ L+ HPN+V +++Y++
Sbjct: 32 GQGTFGTV--QLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFY 89
Query: 403 S---KDEKLLVYDFIEAGSFSALLHGNRGIGRT----PLDWESRVKISLGSAKGIAHIHA 455
+ +D + + + + L R R P L + G H+ +
Sbjct: 90 TLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS 149
Query: 456 AVGGKFILGNIKSSNVLLSQ-DLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVI-E 509
+IK NVL+++ D + DFG + +P+ P+ S YRAPE+I
Sbjct: 150 V---NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL-SPSEPNVAYICSRYYRAPELIFG 205
Query: 510 TKKPTQKSDVYSFGVLLLEMLTGK 533
+ T D++S G + EM+ G+
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 342 EVLGKGSYGTTY--KAILEEGTTVVVKRLKEV-VMGKREFEQQMEVVGRLSQHPNVVPIR 398
EVLG G++ + K L G +K +K+ E ++ V+ ++ +H N+V +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLE 72
Query: 399 AYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAK-----GIAH 452
Y S LV + G F +L RG+ T D ++ L + K GI H
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRIL--ERGV-YTEKDASLVIQQVLSAVKYLHENGIVH 129
Query: 453 IHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTPTVPSR--SAGYRAPEV 507
++K N+L ++ + I+DFGL+ + + + + GY APEV
Sbjct: 130 -----------RDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEV 178
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ K ++ D +S GV+ +L G P
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 53/231 (22%)
Query: 342 EVLGKGSYGTTYKAI--LEEGTTVVVK--RLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
++G GSYG +A LE+ + K R+ E ++ + +++ ++ RL+ H +VV +
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN-HDHVVKV 117
Query: 398 RAYYFSKD----EKLLVYDFIEAGSFSALLHGNRGIGRTPLDW-ESRVKISLGSA-KGIA 451
KD ++L V I F L RTP+ E +K L + G+
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLF-------RTPVYLTELHIKTLLYNLLVGVK 170
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT-------------PL------MNT 492
++H+A + ++K +N L++QD + DFGL P+ MN
Sbjct: 171 YVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 493 PTVPSR------------SAGYRAPEVIETKKP-TQKSDVYSFGVLLLEML 530
T P + YRAPE+I ++ T+ DV+S G + E+L
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
HPN++ + ++ K LV + G + I R I G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELF-----DEIILRQKFSEVDAAVIMKQVLSGT 117
Query: 451 AHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTP-TVPSR--SAGYRA 504
++H + ++K N+LL S+D I DFGL+ + R +A Y A
Sbjct: 118 TYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRWVQ 552
PEV+ KK +K DV+S GV+L +L G P ++++ D P W Q
Sbjct: 175 PEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 231
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 342 EVLGKGSYGTTYKA--ILEEGTTVVVKRLKEVVMGKREFEQQMEVV--GRLSQHPNVVPI 397
+ +GKG++ A IL G V VK + + + ++ V ++ HPN+V +
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI-SLGSAKGIAHIHAA 456
++ LV ++ G L + GR + E+R K + SA H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAH---GRXK-EKEARAKFRQIVSAVQYCH---- 130
Query: 457 VGGKFILG-NIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSAGYRAPEVIETKK 512
KFI+ ++K+ N+LL D I+DFG + N + Y APE+ + KK
Sbjct: 131 --QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 513 -PTQKSDVYSFGVLLLEMLTGKAPIQA 538
+ DV+S GV+L +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 28/235 (11%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS-----QHPNVVP 396
E +G+G+YGT +KA E +V LK V + + + + +H N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVA--LKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ S + LV++F + N LD E KG+ H+
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-----LDPEIVKSFLFQLLKGLGFCHSR 120
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETK 511
+ ++K N+L++++ + ++DFGL P V SA YR P+V+
Sbjct: 121 ---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGA 176
Query: 512 KPTQKS-DVYSFGVLLLEMLTGKAPIQAPGHEDVVD----LPRWVQSVVREEWTS 561
K S D++S G + E+ P+ PG+ DV D + R + + E+W S
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPL-FPGN-DVDDQLKRIFRLLGTPTEEQWPS 229
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPN 393
E LG GS+G + + + +V VK LK V+ + E F +++ + L H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRN 72
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
++ + + K+ V + GS L ++G L SR + + A+G+ ++
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQV--AEGMGYL 127
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSA----GYRAPE 506
+ +FI ++ + N+LL+ I DFGL P + V + APE
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
++T+ + SD + FGV L EM T G+ P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 385 VGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ ++ HPN+V + ++ L+ ++ G L + GR + E+R K
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMK-EKEARSKFR- 121
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR------ 498
+ ++ + + + ++K+ N+LL D+ I+DFG + N TV +
Sbjct: 122 ---QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDAFCG 175
Query: 499 SAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQA 538
+ Y APE+ + KK + DV+S GV+L +++G P
Sbjct: 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 391 HPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
HPN++ + ++ K LV + G + I R I G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELF-----DEIILRQKFSEVDAAVIMKQVLSGT 134
Query: 451 AHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTP-TVPSR--SAGYRA 504
++H + ++K N+LL S+D I DFGL+ + R +A Y A
Sbjct: 135 TYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 191
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV----------DLPRWVQ 552
PEV+ KK +K DV+S GV+L +L G P ++++ D P W Q
Sbjct: 192 PEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 248
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 342 EVLGKGSYGTTYKAILEEGTT---VVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNV 394
+V+G+G++G A+++ T +K L + M KR F ++ +V+ ++
Sbjct: 96 KVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL--VNGDCQW 151
Query: 395 VPIRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAH 452
+ Y F + L LV D+ G LL ++ + P E + +G I
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLP---EDMARFYIGEMVLAIDS 206
Query: 453 IHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-TVPSRSA----GYRAPEV 507
IH ++ +IK NVLL + ++DFG MN TV S A Y +PE+
Sbjct: 207 IHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 263
Query: 508 IETK-----KPTQKSDVYSFGVLLLEMLTGKAPIQAPG----------HEDVVDLPRWVQ 552
++ K + D +S GV + EML G+ P A HE+ P V
Sbjct: 264 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVT 323
Query: 553 SVVRE 557
V E
Sbjct: 324 DVSEE 328
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 57 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 116
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 117 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPT-VPSRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 228 LIYEMAAGYPPFFA 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 39/260 (15%)
Query: 322 VFFEGCSYNF----------DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTT 362
++F+G + N+ DL+++ R + + LG G++G Y+ +
Sbjct: 18 LYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ 77
Query: 363 VVVKRLKEVVMGKREFEQQME--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420
V VK L EV + E + ME ++ + + H N+V + ++ + + G
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 421 ALLHGNRGIGRTP--LDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ 478
+ L R P L + ++ A G ++ FI +I + N LL+
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGP 193
Query: 479 G---CISDFGLTPLMNTPTVPSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLE 528
G I DFG+ + + R G + PE T K+D +SFGVLL E
Sbjct: 194 GRVAKIGDFGMARDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 529 MLT-GKAPIQAPGHEDVVDL 547
+ + G P + +++V++
Sbjct: 253 IFSLGYMPYPSKSNQEVLEF 272
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 81 IPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNW 140
I +NT L L L + HLS +LPS ++ LS+L+ L L N F S S N+
Sbjct: 269 ISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISAS---NF 324
Query: 141 VDLSFNSITGNI------PASIRNLSHLVGLNLQNNSL-TGFIPNF---NLSRLRHLNLS 190
L+ SI GN + NL +L L+L ++ + T N NLS L+ LNLS
Sbjct: 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLS 384
Query: 191 YNHLNGSVPLALQ 203
YN PL+L+
Sbjct: 385 YNE-----PLSLK 392
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 37/243 (15%)
Query: 342 EVLGKGSYGTTYKAILEEGTTV-VVKRLKEVVMGKRE----FEQQMEVVGRLSQHPNVVP 396
+V+G+G++G ++ + +K L + M KR F ++ +V+ ++ +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL--VNGDCQWIT 137
Query: 397 IRAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS-AKGIAHIH 454
Y F + L LV D+ G LL ++ + P E + +G I IH
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLP---EDMARFYIGEMVLAIDSIH 192
Query: 455 AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-TVPSRSA----GYRAPEVIE 509
++ +IK NVLL + ++DFG MN TV S A Y +PE+++
Sbjct: 193 QL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 249
Query: 510 TK-----KPTQKSDVYSFGVLLLEMLTGKAPIQAPG----------HEDVVDLPRWVQSV 554
K + D +S GV + EML G+ P A HE+ P V V
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDV 309
Query: 555 VRE 557
E
Sbjct: 310 SEE 312
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 21/226 (9%)
Query: 322 VFFEGCS-YNFDLEDLLRASAEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFE 379
V F+G + + D + S +VLG G G + G +K L + ++E +
Sbjct: 14 VLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVD 73
Query: 380 QQMEVVGRLSQHPNVVPIRAYY----FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLD 435
+ G P++V I Y K L++ + +E G + + RG
Sbjct: 74 HHWQASGG----PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQ-ERGDQAFTER 128
Query: 436 WESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCI---SDFGLTP--LM 490
+ + +G+A H H ++K N+L + + + +DFG
Sbjct: 129 EAAEIMRDIGTAIQFLHSH-----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183
Query: 491 NTPTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
N P + Y APEV+ +K + D++S GV++ +L G P
Sbjct: 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPN 393
E LG GS+G + + + +V VK LK V+ + E F +++ + L H N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRN 76
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
++ + + K+ V + GS L ++G L SR + + A+G+ ++
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQV--AEGMGYL 131
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSA----GYRAPE 506
+ +FI ++ + N+LL+ I DFGL P + V + APE
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
++T+ + SD + FGV L EM T G+ P
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + V +R
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 196 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---------TPTVPSR 498
+G+ +IH+A + ++K SN+LL+ I DFGL + + V +R
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGK 533
YRAPE++ K KS D++S G +L EML+ +
Sbjct: 197 --WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 83 EALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD 141
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 142 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 199 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 257
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 84 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 143 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 200 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 258
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 57 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 116
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 117 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 228 LIYEMAAGYPPFFA 241
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 342 EVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGKRE----FEQQMEVVGRLSQHPN 393
E LG GS+G + + + +V VK LK V+ + E F +++ + L H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRN 72
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHI 453
++ + + K+ V + GS L ++G L SR + + A+G+ ++
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQV--AEGMGYL 127
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT---PLMNTPTVPSRSA----GYRAPE 506
+ +FI ++ + N+LL+ I DFGL P + V + APE
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 507 VIETKKPTQKSDVYSFGVLLLEMLT-GKAP 535
++T+ + SD + FGV L EM T G+ P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 83 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 141
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 142 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 199 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 257
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 100/258 (38%), Gaps = 28/258 (10%)
Query: 291 GTAATKSKGIRNE-------KPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEV 343
G AA KG E K KEDF + +N + + D + +R
Sbjct: 2 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQN--------TAHLDQFERIR----T 49
Query: 344 LGKGSYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY 401
LG GS+G +E G +K L K+ V+ ++ E + R+ Q N +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRIQQAVNFPFLVKLE 108
Query: 402 FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKF 461
FS + +Y +E + R IGR S +A+ +
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRF-----SEPHARFYAAQIVLTFEYLHSLDL 163
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+L+ Q ++DFG + T + Y APE+I +K + D +
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 224 ALGVLIYEMAAGYPPFFA 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 75 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 133
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 134 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 190
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 191 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 249
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 84 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 143 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 200 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 258
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 100 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 158
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 159 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 215
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 216 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 274
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 22 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 73
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 74 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 133
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 134 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-VPSRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 245 LGVLIYEMAAGYPPFFA 261
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 44/268 (16%)
Query: 279 IAFCCLKKKDSEGTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLR 338
I F L K +G G N +D GS VQ V + +Y +++
Sbjct: 58 IYFLGLNAKKRQGMTG----GPNNGGYDDDQGSYVQ-------VPHDHVAYRYEV----- 101
Query: 339 ASAEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP----- 392
+V+GKG +G KA + V +K ++ R+ +++ ++ L +
Sbjct: 102 --LKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
NV+ + + ++ + ++ + + L+ N+ G SL + AH
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYE-LIKKNKFQG-----------FSLPLVRKFAH 207
Query: 453 -----IHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMNTPTVPS-RSAGYRA 504
+ A + I ++K N+LL Q + I DFG + + +S YRA
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRA 267
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTG 532
PEVI + D++S G +L E+LTG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 14/251 (5%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKL 408
+E G +K L K+ V+ ++ E + R+ Q N + FS +
Sbjct: 57 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLEFSFKDNS 115
Query: 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKS 468
+Y +E + R IGR S +A+ + I ++K
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 469 SNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGVLLL 527
N+++ Q ++DFG + T + Y APE+I +K + D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 528 EMLTGKAPIQA 538
EM G P A
Sbjct: 231 EMAAGYPPFFA 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 90 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 148
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 149 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 205
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 206 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 264
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 110 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 168
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ + +
Sbjct: 169 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 496 PSRSAG-------YRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547
R G + PE T K+D +SFGVLL E+ + G P + +++V++
Sbjct: 226 -YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 284
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 20/217 (9%)
Query: 330 NFDLEDLLRASAEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRL 388
+ + D + S +VLG G G + G +K L + ++E + + G
Sbjct: 4 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG- 62
Query: 389 SQHPNVVPIRAYY----FSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
P++V I Y K L++ + +E G + + RG + + +
Sbjct: 63 ---PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQ-ERGDQAFTEREAAEIMRDI 118
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCI---SDFGLTP--LMNTPTVPSRS 499
G+A H H ++K N+L + + + +DFG N P +
Sbjct: 119 GTAIQFLHSH-----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 173
Query: 500 AGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
Y APEV+ +K + D++S GV++ +L G P
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 24/256 (9%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGR--TPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+V +++ G FS L R IGR P +I L ++H+ I
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLT----FEYLHSL---DLIY 164
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSF 522
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 523 GVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 225 GVLIYEMAAGYPPFFA 240
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 2 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 53
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 54 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 113
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 114 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 225 LGVLIYEMAAGYPPFFA 241
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 32/213 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE------------QQMEVVGRLSQH 391
+ GSYG + EG V +KR+ V R +++ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HH 88
Query: 392 PNVVPIRAYYFSKDE----KLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
PN++ +R + +E KL + + + ++H R + I LG
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL----TPLMN-TPTVPSRSAGY 502
+H + ++ N+LL+ + I DF L T N T V R Y
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR--WY 199
Query: 503 RAPE-VIETKKPTQKSDVYSFGVLLLEMLTGKA 534
RAPE V++ K T+ D++S G ++ EM KA
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWESPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 57 RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 116
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 117 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 228 LIYEMAAGYPPFFA 241
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 39/245 (15%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 124 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 182
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ +
Sbjct: 183 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----- 234
Query: 496 PSRSAGYRA------------PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHE 542
R+ YR PE T K+D +SFGVLL E+ + G P + ++
Sbjct: 235 -YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 293
Query: 543 DVVDL 547
+V++
Sbjct: 294 EVLEF 298
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 32/213 (15%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE------------QQMEVVGRLSQH 391
+ GSYG + EG V +KR+ V R +++ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HH 88
Query: 392 PNVVPIRAYYFSKDE----KLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA 447
PN++ +R + +E KL + + + ++H R + I LG
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL----TPLMN-TPTVPSRSAGY 502
+H + ++ N+LL+ + I DF L T N T V R Y
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR--WY 199
Query: 503 RAPE-VIETKKPTQKSDVYSFGVLLLEMLTGKA 534
RAPE V++ K T+ D++S G ++ EM KA
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 343 VLGKGSYGTTYKAILEEGTTV--VVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
+G+GS+G K +++GT + K++ K V F+Q++E++ L HPN++ +
Sbjct: 33 TIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD-HPNIIRLYE 90
Query: 400 YYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+ + LV + G F ++H RV +A+ + + +AV
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVH-------------KRVFRESDAARIMKDVLSAVA 137
Query: 459 GKFILG----NIKSSNVLL---SQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVI 508
L ++K N L S D + DFGL + G Y +P+V+
Sbjct: 138 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 197
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV 545
E + D +S GV++ +L G P AP +V+
Sbjct: 198 EGLYGPE-CDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + +G GS+G
Sbjct: 1 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTIGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYMPGGDMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 39/245 (15%)
Query: 332 DLEDLLRASAEV---LGKGSYGTTYKAILE------EGTTVVVKRLKEVVMGKREFEQQM 382
DL+++ R + + LG G++G Y+ + V VK L EV + E + M
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 383 E--VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTP--LDWES 438
E ++ + + H N+V + ++ + + G + L R P L
Sbjct: 101 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 159
Query: 439 RVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG---CISDFGLTPLMNTPTV 495
+ ++ A G ++ FI +I + N LL+ G I DFG+ +
Sbjct: 160 LLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI----- 211
Query: 496 PSRSAGYRA------------PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHE 542
R+ YR PE T K+D +SFGVLL E+ + G P + ++
Sbjct: 212 -YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 270
Query: 543 DVVDL 547
+V++
Sbjct: 271 EVLEF 275
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWESPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 57 RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 116
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 117 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 228 LIYEMAAGYPPFFA 241
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 14/251 (5%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKL 408
+E G +K L K+ V+ ++ E + R+ Q N + FS +
Sbjct: 57 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLEFSFKDNS 115
Query: 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKS 468
+Y +E + R IGR S +A+ + I ++K
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 469 SNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGVLLL 527
N+++ Q ++DFG + T + Y APE+I +K + D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 528 EMLTGKAPIQA 538
EM G P A
Sbjct: 231 EMAAGYPPFFA 241
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPI 397
+ LG GS+G +E G +K L K+ V+ ++ E + + + + P +V +
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 398 RAYYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ +V +++ G FS L R IGR S +A+ +
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYL 143
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-VPSRSAGYRAPEVIETKKPTQ 515
I ++K N+L+ Q ++DFG + T + Y APE+I +K +
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNK 203
Query: 516 KSDVYSFGVLLLEMLTGKAPIQA 538
D ++ GVL+ EM G P A
Sbjct: 204 AVDWWALGVLIYEMAAGYPPFFA 226
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 343 VLGKGSYGTTYKAILEEGTTV--VVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRA 399
+G+GS+G K +++GT + K++ K V F+Q++E++ L HPN++ +
Sbjct: 16 TIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD-HPNIIRLYE 73
Query: 400 YYFSKDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
+ + LV + G F ++H RV +A+ + + +AV
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVH-------------KRVFRESDAARIMKDVLSAVA 120
Query: 459 GKFILG----NIKSSNVLL---SQDLQGCISDFGLTPLMNTPTVPSRSAG---YRAPEVI 508
L ++K N L S D + DFGL + G Y +P+V+
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 180
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV 545
E + D +S GV++ +L G P AP +V+
Sbjct: 181 EGLYGPE-CDEWSAGVMMYVLLCGYPPFSAPTDXEVM 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + +G GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTIGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 24/256 (9%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 57 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 116
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGR--TPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+V +++ G FS L R IGR P +I L ++H+ I
Sbjct: 117 LYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLT----FEYLHSL---DLIY 165
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSF 522
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 523 GVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 226 GVLIYEMAAGYPPFFA 241
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWESPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 57 RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 116
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 117 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 228 LIYEMAAGYPPFFA 241
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 340 SAEVLGKGSYGTTYKAI-----LEEGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQH 391
+ E LG G + K L+ + KR + + + + E+++ ++ + QH
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 392 PNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
PNV+ + Y +K + +L+ + + G L + L E + G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVY 128
Query: 452 HIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTPLMNTPTVPSRSAG---YRA 504
++H+ F ++K N+ LL +++ + I DFGL ++ G + A
Sbjct: 129 YLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
PE++ + ++D++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR + +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----AEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 465 NIKSSNVLLSQDLQGCISDFG---------LTPLMNTPTVPSRSAGYRAPEVIETKKPTQ 515
++K N+L+S D + DFG LT L NT + Y APE T
Sbjct: 159 DVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT----VGTLYYXAPERFSESHATY 214
Query: 516 KSDVYSFGVLLLEMLTGKAPIQA 538
++D+Y+ +L E LTG P Q
Sbjct: 215 RADIYALTCVLYECLTGSPPYQG 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 24/256 (9%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGR--TPLDWESRVKISLGSAKGIAHIHAAVGGKFIL 463
+V +++ G FS L R IGR P +I L ++H+ I
Sbjct: 116 LYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLT----FEYLHSL---DLIY 164
Query: 464 GNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSF 522
++K N+L+ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 523 GVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 225 GVLIYEMAAGYPPFFA 240
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 22 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWESPAQNTAHLDQFE-RIKTLGTGSFG 76
Query: 351 TTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 77 RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 136
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 137 LYMVMEYVPGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 248 LIYEMAAGYPPFFA 261
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 340 SAEVLGKGSYGTTYKAI-----LEEGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQH 391
+ E LG G + K L+ + KR + + + + E+++ ++ + QH
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QH 73
Query: 392 PNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
PNV+ + Y +K + +L+ + + G L + L E + G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVY 128
Query: 452 HIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTPLMNTPTVPSRSAG---YRA 504
++H+ F ++K N+ LL +++ + I DFGL ++ G + A
Sbjct: 129 YLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
PE++ + ++D++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 14/251 (5%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKL 408
+E G +K L K+ V+ ++ E + R+ Q N + FS +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNS 114
Query: 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKS 468
+Y +E + R IGR S +A+ + I ++K
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 469 SNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGVLLL 527
N+++ Q ++DFG + T + Y APE+I +K + D ++ GVL+
Sbjct: 170 ENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 528 EMLTGKAPIQA 538
EM G P A
Sbjct: 230 EMAAGYPPFFA 240
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 342 EVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
E LGKG++ + + +E ++ K ++ E++ + RL +HPN+V +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARIC-RLLKHPNIVRL 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ LV+D + G + + R ++ S S + + ++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDI-----VAR---EYYSEADASHCIQQILESVNHCH 120
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVP----SRSAGYRAPEVIET 510
+ ++K N+LL+ +G ++DFGL + + + GY +PEV+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ D+++ GV+L +L G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 30/259 (11%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGXEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGR--TPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+V +++ G FS L R IGR P +I L ++H+
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLT----FEYLHSL---D 161
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDV 519
I ++K N+L+ Q ++DFG + T + Y APE+I +K + D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 520 YSFGVLLLEMLTGKAPIQA 538
++ GVL+ EM G P A
Sbjct: 222 WALGVLIYEMAAGYPPFFA 240
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQMEV---VGRLSQHPNVVPI 397
E LGKG++ + + + G K + + R+ Q++E + RL +HPN+V +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRL 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ LV+D + G + + R ++ S S + + ++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDI-----VAR---EYYSEADASHCIQQILESVNHCH 120
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVP----SRSAGYRAPEVIET 510
+ ++K N+LL+ +G ++DFGL + + + GY +PEV+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ D+++ GV+L +L G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + +G GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTIGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYMPGGDMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ EM G P A
Sbjct: 227 LIYEMAAGYPPFFA 240
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 14/251 (5%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 55
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKL 408
+E G +K L K+ V+ ++ E + R+ Q N + FS +
Sbjct: 56 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLEFSFKDNS 114
Query: 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKS 468
+Y +E + R IGR S +A+ + I ++K
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 469 SNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGVLLL 527
N+++ Q ++DFG + T + Y APE+I +K + D ++ GVL+
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 528 EMLTGKAPIQA 538
EM G P A
Sbjct: 230 EMAAGYPPFFA 240
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 28/235 (11%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS-----QHPNVVP 396
E +G+G+YGT +KA E +V LK V + + + + +H N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVA--LKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 397 IRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA 456
+ S + LV++F + G LD E KG+ H+
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNG----DLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAG-----YRAPEVIETK 511
+ ++K N+L++++ + +++FGL P V SA YR P+V+
Sbjct: 121 ---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGA 176
Query: 512 KPTQKS-DVYSFGVLLLEMLTGKAPIQAPGHEDVVD----LPRWVQSVVREEWTS 561
K S D++S G + E+ P+ PG+ DV D + R + + E+W S
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPL-FPGN-DVDDQLKRIFRLLGTPTEEQWPS 229
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 55 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 108
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 109 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 55 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 108
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 109 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVK--RLKEVVMGKRE---FEQQMEVVGRLSQHPNVVPIR 398
+G+GS+ T YK L+ TTV V L++ + K E F+++ E + L QHPN+V
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGL-QHPNIVRFY 91
Query: 399 AYYFS--KDEK--LLVYDFIEAGSFSALLHGNRGIGRTPL-DWESRVKISLGSAKGIAHI 453
+ S K +K +LV + +G+ L + L W ++ KG+ +
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFL 145
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGC-ISDFGLTPLMNTPTVPS--RSAGYRAPEVIET 510
H I ++K N+ ++ I D GL L + + + APE E
Sbjct: 146 HTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYE- 203
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAP 535
+K + DVY+FG LE T + P
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 52/279 (18%)
Query: 343 VLGKGSYGTTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQ----MEV-----VGRLSQH 391
+LGKG +GT + L + V +K + + V+G +EV VG H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 392 PNVVPIRAYYFSKDEKLLVYDF-IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
P V+ + ++ +++ +LV + + A + +G P SR A I
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP----SRCFFGQVVA-AI 152
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQ-GC--ISDFGLTPLMNTPTVPSRSAG--YRAP 505
H H+ + +IK N+L+ DL+ GC + DFG L++ Y P
Sbjct: 153 QHCHSR---GVVHRDIKDENILI--DLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPP 207
Query: 506 EVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564
E I + + V+S G+LL +M+ G P E E+
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPF---------------------ERDQEIL 246
Query: 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603
+ EL ++ + +++ C+A P RP++EE++
Sbjct: 247 EAELHFPAHVSPDCCALIR---RCLAPKPSSRPSLEEIL 282
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 53/124 (42%), Gaps = 23/124 (18%)
Query: 86 LEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS-------PQL 138
LEKL +L L L N + S+ SL +LQ N S N P L PQL
Sbjct: 343 LEKLGNLQTLDLSHNDIEA---SDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQL 399
Query: 139 NWVDLSFNSITGNIPAS-IRNLSHLVGLNL-------QNNSLTGFIPNFNLSRLRHLNLS 190
+DL+F + N P S +NL L LNL N L +P LRHLNL
Sbjct: 400 ELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLP-----VLRHLNLK 454
Query: 191 YNHL 194
NH
Sbjct: 455 GNHF 458
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 19/136 (13%)
Query: 78 YGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQ 137
+ I + T + L L L + HL G LPS + L+ L+ L L N+F S +
Sbjct: 263 FSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAA-- 319
Query: 138 LNWVDLSFNSITGNIP------ASIRNLSHLVGLNLQNNSLTGF----IPNFNLSRLRHL 187
N+ L+ I GN+ + L +L L+L +N + + NLS L+ L
Sbjct: 320 -NFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTL 378
Query: 188 NLSYNHLNGSVPLALQ 203
NLS+N PL LQ
Sbjct: 379 NLSHNE-----PLGLQ 389
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+L+ Q ++DFG + T + Y APE+I +K + D +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 223 ALGVLIYEMAAGYPPFFA 240
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+L+ Q ++DFG + T + Y APE+I +K + D +
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 216 ALGVLIYEMAAGYPPFFA 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+L+ Q ++DFG + T + Y APE+I +K + D +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 223 ALGVLIYEMAAGYPPFFA 240
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+L+ Q ++DFG + T + Y APE+I +K + D +
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 216 ALGVLIYEMAAGYPPFFA 233
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+++ Q ++DFG + T + Y APE+I +K + D ++
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 117/281 (41%), Gaps = 50/281 (17%)
Query: 340 SAEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVV 395
+++ LG+G + + I + G K LK+ G + E ++ V+ P V+
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA 455
+ Y + E +L+ ++ G +L + D +K L +G+ ++H
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL---EGVYYLHQ 149
Query: 456 AVGGKFILGNIKSSNVLLSQ-----DLQGCISDFGLT----------PLMNTPTVPSRSA 500
+ ++K N+LLS D++ I DFG++ +M TP
Sbjct: 150 ---NNIVHLDLKPQNILLSSIYPLGDIK--IVDFGMSRKIGHACELREIMGTPE------ 198
Query: 501 GYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAP-IQAPGHEDVVDLPRWVQSVVREEW 559
Y APE++ T +D+++ G++ +LT +P + E +++ S V ++
Sbjct: 199 -YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI-----SQVNVDY 252
Query: 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTME 600
+ E F ++ + +Q S + K P+ RPT E
Sbjct: 253 SEETFS-------SVSQLATDFIQ---SLLVKNPEKRPTAE 283
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 30/259 (11%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 22 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 73
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 74 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 133
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGR--TPLDWESRVKISLGSAKGIAHIHAAVGGK 460
+V +++ G FS L R IGR P +I L ++H+
Sbjct: 134 NSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLT----FEYLHSL---D 182
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDV 519
I ++K N+L+ Q ++DFG + T + Y APE+I +K + D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 520 YSFGVLLLEMLTGKAPIQA 538
++ GVL+ EM G P A
Sbjct: 243 WALGVLIYEMAAGYPPFFA 261
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+L+ Q ++DFG + T + Y APE+I +K + D +
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 217
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 218 ALGVLIYEMAAGYPPFFA 235
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 25/202 (12%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE-----QQMEVVGRLSQHPNVVPIR 398
LG+G+Y T YK + +V LKE+ + E +++ ++ L +H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVA--LKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLH 66
Query: 399 AYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSA-KGIAHIHAAV 457
++ LV+++++ L I VK+ L +G+A+ H
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINM------HNVKLFLFQLLRGLAYCHRQ- 119
Query: 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR----SAGYRAPEVI--ETK 511
K + ++K N+L+++ + ++DFGL + PT + YR P+++ T
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 512 KPTQKSDVYSFGVLLLEMLTGK 533
TQ D++ G + EM TG+
Sbjct: 178 YSTQ-IDMWGVGCIFYEMATGR 198
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 18/253 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E + N D + LG GS+G
Sbjct: 2 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWENPAQNTAHLDQFE-RIKTLGTGSFG 56
Query: 351 TTYKAI-LEEGTTVVVKRL-KEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKL 408
+E G +K L K+ V+ ++ E + R+ Q N + FS +
Sbjct: 57 RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLEFSFKDNS 115
Query: 409 LVYDFIEAGSFSALLHGNRGIGR--TPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNI 466
+Y +E + R IGR P +I L ++H+ I ++
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLHSL---DLIYRDL 168
Query: 467 KSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGVL 525
K N+++ Q ++DFG + T + Y APE+I +K + D ++ GVL
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 526 LLEMLTGKAPIQA 538
+ EM G P A
Sbjct: 229 IYEMAAGYPPFFA 241
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 20/254 (7%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYG 350
G AA KG E KE + +A+++ L +E S N D + LG GS+G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQF-DRIKTLGTGSFG 55
Query: 351 TTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFSKDE 406
+E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 407 KLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGN 465
+V +++ G FS L R IGR S +A+ + I +
Sbjct: 116 LYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 466 IKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYSFGV 524
+K N+L+ Q ++DFG + T + Y APE+I +K + D ++ GV
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 525 LLLEMLTGKAPIQA 538
L+ +M G P A
Sbjct: 227 LIYQMAAGYPPFFA 240
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEV-----VMGKREFEQQMEVVGRLSQHPNVV 395
AE LG+G +G ++ + + + +V V+ K+E + +++H N++
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEIS-----ILNIARHRNIL 64
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL--GSAKGIAHI 453
+ + S +E +++++FI L I + + R +S + + +
Sbjct: 65 HLHESFESMEELVMIFEFISG------LDIFERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFG----LTPLMNTPTVPSRSAGYRAPEV 507
H+ G F +I+ N++ I +FG L P N + + + Y APEV
Sbjct: 119 HSHNIGHF---DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT-APEYYAPEV 174
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567
+ + +D++S G L+ +L+G P A ++ +++ +++ E+T FD E
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE------NIMNAEYT---FDEE 225
Query: 568 LMRYENIE 575
+ +IE
Sbjct: 226 AFKEISIE 233
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 50 SVCTSWVGI-TCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPS 108
++C G+ +C N + V + IPA+T +KLD L+SN LS LPS
Sbjct: 3 ALCKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADT-KKLD------LQSNKLSS-LPS 54
Query: 109 NVL-SLSSLRFLYLQNNNFSGNIPSSLSPQLN-----WVDLSFNSITGNIPASIRNLSHL 162
L+ LR LYL +N +P+ + +L WV + N + L +L
Sbjct: 55 KAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWV--TDNKLQALPIGVFDQLVNL 111
Query: 163 VGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHL 194
L L N L P +L++L +L+L YN L
Sbjct: 112 AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL 145
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+++ Q ++DFG + T + Y APE+I +K + D +
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 223 ALGVLIYEMAAGYPPFFA 240
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+++ Q ++DFG + T + Y APE+I +K + D +
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 224 ALGVLIYEMAAGYPPFFA 241
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + + E+++ ++ + QHPNV+ + Y +K + +L+ + + G L +
Sbjct: 56 VSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILIGELVAGGELFDFL-----AEKE 109
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L E + G+ ++H+ F ++K N+ LL +++ + I DFGL
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
++ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 29/239 (12%)
Query: 344 LGKGSYGTTYKA--ILEEGTTVVVKRLKEVVMGKREFE----QQMEVVGRLS--QHPNVV 395
+G+G+YG +KA + G V +KR++ V G+ +++ V+ L +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 396 PI----RAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
+ ++ KL LV++ ++ + L + + E+ + +G+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL----DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR---SAGYRAPEV 507
+H+ + + ++K N+L++ Q ++DFGL + + + + YRAPEV
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV---VREEWTSEV 563
+ D++S G + EM K + G DV L + + + E+W +V
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFR--GSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 20/206 (9%)
Query: 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKREFEQQMEV---VGRLSQHPNVVPI 397
E +GKG++ + + L G K + + R+ Q++E + RL +H N+V +
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD-HQKLEREARICRLLKHSNIVRL 68
Query: 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV 457
+ LV+D + G + + R + + H H
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQM- 122
Query: 458 GGKFILGNIKSSNVLLSQDLQGC---ISDFGLTPLMNTPTVP----SRSAGYRAPEVIET 510
+ ++K N+LL+ +G ++DFGL + + + GY +PEV+
Sbjct: 123 --GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 511 KKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ + D+++ GV+L +L G P
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLT--------PLMNTPTVPSRSAGYRAPEVIETKK 512
I ++K +N+L+S + DFG+ + T V +A Y +PE
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG-TAQYLSPEQARGDS 195
Query: 513 PTQKSDVYSFGVLLLEMLTGKAP 535
+SDVYS G +L E+LTG+ P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR---SAGYRAPEVIETKKP 513
I ++K +N+++S + DFG+ + N+ T + +A Y +PE
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 514 TQKSDVYSFGVLLLEMLTGKAP 535
+SDVYS G +L E+LTG+ P
Sbjct: 214 DARSDVYSLGCVLYEVLTGEPP 235
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN-------- 393
++GKGS+G KA E V +K ++ K+ F Q ++ RL + N
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIK----IIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 97
Query: 394 -VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIA 451
+V ++ ++ ++ LV++ + + L + N RG+ L+ + + +A
Sbjct: 98 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS---LNLTRKFAQQMCTALLFL 154
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMNTPTVPS-RSAGYRAPEVI 508
A I ++K N+LL + I DFG + + +S YR+PEV+
Sbjct: 155 ---ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 211
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGK 533
D++S G +L+EM TG+
Sbjct: 212 LGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN-------- 393
++GKGS+G KA E V +K ++ K+ F Q ++ RL + N
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIK----IIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 116
Query: 394 -VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIA 451
+V ++ ++ ++ LV++ + + L + N RG+ L+ + + +A
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS---LNLTRKFAQQMCTALLFL 173
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMNTPTVPS-RSAGYRAPEVI 508
A I ++K N+LL + I DFG + + +S YR+PEV+
Sbjct: 174 ---ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 230
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGK 533
D++S G +L+EM TG+
Sbjct: 231 LGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP--------LMNTPTVPSRS 499
KGI ++H K I +IK SN+L+ +D I+DFG++ L NT P+
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPA-- 202
Query: 500 AGYRAPEVI-ETKK--PTQKSDVYSFGVLLLEMLTGKAPI 536
+ APE + ET+K + DV++ GV L + G+ P
Sbjct: 203 --FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR---SAGYRAPEVIETKKP 513
I ++K +N+++S + DFG+ + N+ T + +A Y +PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 514 TQKSDVYSFGVLLLEMLTGKAP 535
+SDVYS G +L E+LTG+ P
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR---SAGYRAPEVIETKKP 513
I ++K +N+++S + DFG+ + N+ T + +A Y +PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 514 TQKSDVYSFGVLLLEMLTGKAP 535
+SDVYS G +L E+LTG+ P
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR---SAGYRAPEVIETKKP 513
I ++K +N+++S + DFG+ + N+ T + +A Y +PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 514 TQKSDVYSFGVLLLEMLTGKAP 535
+SDVYS G +L E+LTG+ P
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP 218
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 462 ILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVY 520
I ++K N+L+ + ++DFG + T + Y APE+I +K + D +
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 209
Query: 521 SFGVLLLEMLTGKAPIQA 538
+ GVL+ EM G P A
Sbjct: 210 ALGVLIYEMAAGYPPFFA 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLM----NTPTVPSR---SAGYRAPEVIETKKP 513
I ++K +N+++S + DFG+ + N+ T + +A Y +PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 514 TQKSDVYSFGVLLLEMLTGKAP 535
+SDVYS G +L E+LTG+ P
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP 218
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 105/246 (42%), Gaps = 33/246 (13%)
Query: 319 NKLVFFEGCSYNFDLE-DLLRASAE---VLGKGSYGTTYKA----ILEEGTT--VVVKRL 368
N+ + + Y +DL+ + R + E VLG G++G A I + G + V VK L
Sbjct: 24 NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML 83
Query: 369 KEVV-MGKRE-FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGN 426
KE +RE +++++ +L H N+V + L++++ G L
Sbjct: 84 KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 427 R-GIGRTPLDWESRVKISLGSAKGIAHI--------HAAVGGKF------ILGNIKSSNV 471
R +++E++ ++ + A G +F + ++ + NV
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV 203
Query: 472 LLSQDLQGCISDFGLT-PLMNTPTVPSRSAG-----YRAPEVIETKKPTQKSDVYSFGVL 525
L++ I DFGL +M+ R + APE + T KSDV+S+G+L
Sbjct: 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL 263
Query: 526 LLEMLT 531
L E+ +
Sbjct: 264 LWEIFS 269
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 57/227 (25%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG--KREFE----QQMEVVGRLSQHPNVVPI 397
+G+G++G +KA + V LK+V+M K F ++++++ +L +H NVV +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVA--LKKVLMENEKEGFPITALREIKIL-QLLKHENVVNL 82
Query: 398 --------RAYYFSKDEKLLVYDFIE---AGSFSALLHGNRGIGRTPLDWESRVKISLGS 446
Y K LV+DF E AG S +L VK +L
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----------------VKFTLSE 126
Query: 447 AK--------GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--TVP 496
K G+ +IH K + ++K++NVL+++D ++DFGL + + P
Sbjct: 127 IKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 497 SR------SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGKAPI 536
+R + YR PE++ ++ D++ G ++ EM T ++PI
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN-------- 393
++GKGS+G KA E V +K ++ K+ F Q ++ RL + N
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIK----IIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 116
Query: 394 -VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGN-RGIGRTPLDWESRVKISLGSAKGIA 451
+V ++ ++ ++ LV++ + + L + N RG+ L+ + + +A
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS---LNLTRKFAQQMCTALLFL 173
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGCIS--DFGLTPLMNTPTVPS-RSAGYRAPEVI 508
A I ++K N+LL + I DFG + + +S YR+PEV+
Sbjct: 174 ---ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 230
Query: 509 ETKKPTQKSDVYSFGVLLLEMLTGK 533
D++S G +L+EM TG+
Sbjct: 231 LGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 57/227 (25%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG--KREFE----QQMEVVGRLSQHPNVVPI 397
+G+G++G +KA + V LK+V+M K F ++++++ +L +H NVV +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVA--LKKVLMENEKEGFPITALREIKIL-QLLKHENVVNL 82
Query: 398 --------RAYYFSKDEKLLVYDFIE---AGSFSALLHGNRGIGRTPLDWESRVKISLGS 446
Y K LV+DF E AG S +L VK +L
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----------------VKFTLSE 126
Query: 447 AK--------GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--TVP 496
K G+ +IH K + ++K++NVL+++D ++DFGL + + P
Sbjct: 127 IKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 497 SR------SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGKAPI 536
+R + YR PE++ ++ D++ G ++ EM T ++PI
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 57/227 (25%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG--KREFE----QQMEVVGRLSQHPNVVPI 397
+G+G++G +KA + V LK+V+M K F ++++++ +L +H NVV +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVA--LKKVLMENEKEGFPITALREIKIL-QLLKHENVVNL 82
Query: 398 --------RAYYFSKDEKLLVYDFIE---AGSFSALLHGNRGIGRTPLDWESRVKISLGS 446
Y K LV+DF E AG S +L VK +L
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL----------------VKFTLSE 126
Query: 447 AK--------GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--TVP 496
K G+ +IH K + ++K++NVL+++D ++DFGL + + P
Sbjct: 127 IKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 497 SR------SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGKAPI 536
+R + YR PE++ ++ D++ G ++ EM T ++PI
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 57/227 (25%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMG--KREFE----QQMEVVGRLSQHPNVVPI 397
+G+G++G +KA + V LK+V+M K F ++++++ +L +H NVV +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVA--LKKVLMENEKEGFPITALREIKIL-QLLKHENVVNL 81
Query: 398 --------RAYYFSKDEKLLVYDFIE---AGSFSALLHGNRGIGRTPLDWESRVKISLGS 446
Y K LV+DF E AG S +L VK +L
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----------------VKFTLSE 125
Query: 447 AK--------GIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--TVP 496
K G+ +IH K + ++K++NVL+++D ++DFGL + + P
Sbjct: 126 IKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 497 SR------SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGKAPI 536
+R + YR PE++ ++ D++ G ++ EM T ++PI
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 44/224 (19%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVV----VKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPI 397
++G+GSYG Y A + V V R+ E ++ + +++ ++ RL I
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD---YII 88
Query: 398 RAYYFSKDEKLLVYD--FIEAGSFSALLHGNRGIGRTPLDW-ESRVKISLGSAK-GIAHI 453
R Y + LL +D +I + L + + +TP+ E +K L + G I
Sbjct: 89 RLYDLIIPDDLLKFDELYIVLEIADSDL---KKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 454 HAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-------------------- 493
H + I ++K +N LL+QD + DFGL +N+
Sbjct: 146 HES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 494 ------TVPSRSAGYRAPEVIETKKPTQKS-DVYSFGVLLLEML 530
T + YRAPE+I ++ KS D++S G + E+L
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 29/239 (12%)
Query: 344 LGKGSYGTTYKA--ILEEGTTVVVKRLKEVVMGKREFE----QQMEVVGRLS--QHPNVV 395
+G+G+YG +KA + G V +KR++ V G+ +++ V+ L +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 396 PI----RAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
+ ++ KL LV++ ++ + L + + E+ + +G+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL----DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR---SAGYRAPEV 507
+H+ + + ++K N+L++ Q ++DFGL + + + + YRAPEV
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV---VREEWTSEV 563
+ D++S G + EM K + G DV L + + + E+W +V
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFR--GSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLL-SQDLQGCISDFGLTPLMNTPTVPSR-------- 498
+G+ +IH+A + ++K +N+ + ++DL I DFGL +M+ P +
Sbjct: 131 RGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMD-PHYSHKGHLSEGLV 186
Query: 499 SAGYRAPEVIETKKPTQKS-DVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE 557
+ YR+P ++ + K+ D+++ G + EMLTGK + + L VV E
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 558 EWTSEVFDV 566
E E+ V
Sbjct: 247 EDRQELLSV 255
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 29/239 (12%)
Query: 344 LGKGSYGTTYKA--ILEEGTTVVVKRLKEVVMGKREFE----QQMEVVGRLS--QHPNVV 395
+G+G+YG +KA + G V +KR++ V G+ +++ V+ L +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 396 PI----RAYYFSKDEKL-LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGI 450
+ ++ KL LV++ ++ + L + + E+ + +G+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL----DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 451 AHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSR---SAGYRAPEV 507
+H+ + + ++K N+L++ Q ++DFGL + + + + YRAPEV
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 508 IETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV---VREEWTSEV 563
+ D++S G + EM K + G DV L + + + E+W +V
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFR--GSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVV-------MGKREFEQQMEVVGRLSQHPN 393
EV+GKG++ + I E ++ +V + + +++ + L +HP+
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPH 87
Query: 394 VVPIRAYYFSKDEKLLVYDFIEAGS--FSALLHGNRGIGRTPLDWESRVKISLGSAKGIA 451
+V + Y S +V++F++ F + + G + ++ L + +
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL---EALR 144
Query: 452 HIHAAVGGKFILGNIKSSNVLLSQDLQGC---ISDFGLT-PLMNTPTVPSRSAG---YRA 504
+ H I ++K NVLL+ + DFG+ L + V G + A
Sbjct: 145 YCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
PEV++ + + DV+ GV+L +L+G P
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 56/241 (23%)
Query: 342 EVLGKGSYGTTYKAILEEGTTVV----VKRLKEVVMGKREFEQQMEVVGRLSQ------H 391
++G+GSYG Y A + V V R+ E ++ + +++ ++ RL H
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLH 93
Query: 392 PNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDW-ESRVKISLGSAK-G 449
++P F DE +V + ++ + + +TP+ E VK L + G
Sbjct: 94 DLIIPEDLLKF--DELYIVLEIADSDL--------KKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---------------- 493
IH + I ++K +N LL+QD I DFGL +N+
Sbjct: 144 EKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 494 -------------TVPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLT-GKAPIQA 538
T + YRAPE+I ++ T D++S G + E+L K+ I
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 539 P 539
P
Sbjct: 261 P 261
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 45/232 (19%)
Query: 335 DLLRASAEV---LGKGSYGTTYKAILEE--GTTVVVKRLKEVVMGKREFEQQMEVVGRL- 388
D+L A E+ LG+G++G + I + G V VK +K V +++V+ L
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 389 SQHPN----VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ PN V + ++ +V++ + ++ + + G P + K++
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMAY 125
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---------------------DLQGCISD 483
K + +H+ K ++K N+L Q D++ + D
Sbjct: 126 QICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIK--VVD 180
Query: 484 FGLTPL---MNTPTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTG 532
FG ++ V +R YRAPEVI +Q DV+S G +L+E G
Sbjct: 181 FGSATYDDEHHSTLVSTRH--YRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 26/257 (10%)
Query: 291 GTAATKSKGIRNEKPKEDFGSGVQEAEKNKLVFFEGCSYN---FDLEDLLRASAEVLGKG 347
G AA KG E KE + +A+++ L +E S N D D ++ LG G
Sbjct: 1 GNAAAAKKGSEQESVKE----FLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTG 52
Query: 348 SYGTTYKAILEE-GTTVVVKRL-KEVVMGKREFEQQM--EVVGRLSQHPNVVPIRAYYFS 403
S+G +E G +K L K+ V+ ++ E + + + + P +V + +
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 404 KDEKLLVYDFIEAGS-FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFI 462
+V +++ G FS L R IGR S +A+ + I
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL----RRIGRF-----SEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 463 LGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP-SRSAGYRAPEVIETKKPTQKSDVYS 521
++K N+L+ Q ++DFG + T + APE+I +K + D ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWA 223
Query: 522 FGVLLLEMLTGKAPIQA 538
GVL+ EM G P A
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3LAQ|U Chain U, Structure-Based Engineering Of Species Selectivity In The
Upa-Upar Interaction
pdb|3LAQ|V Chain V, Structure-Based Engineering Of Species Selectivity In The
Upa-Upar Interaction
Length = 277
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 18/67 (26%)
Query: 174 GFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPPSSF-----EGNSML-----------C 217
GF N L+ N Y H NG L LQ FPP+ F EGN+ L C
Sbjct: 156 GFHSNQTFHFLKCCN--YTHCNGGPVLDLQSFPPNGFQCYSCEGNNTLGCSSEEASLINC 213
Query: 218 GPPLNQC 224
P+NQC
Sbjct: 214 RGPMNQC 220
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 501 GYRAPEVIETKKPTQKS--DVYSFGVLLLEMLTGKAPI 536
G+RAPEV+ TK P Q + D++S GV+ L +L+G+ P
Sbjct: 211 GFRAPEVL-TKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 45/232 (19%)
Query: 335 DLLRASAEV---LGKGSYGTTYKAILEE--GTTVVVKRLKEVVMGKREFEQQMEVVGRL- 388
D+L A E+ LG+G++G + I + G V VK +K V +++V+ L
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 389 SQHPN----VVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL 444
+ PN V + ++ +V++ + ++ + + G P + K++
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMAY 125
Query: 445 GSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---------------------DLQGCISD 483
K + +H+ K ++K N+L Q D++ + D
Sbjct: 126 QICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIK--VVD 180
Query: 484 FGLTPL---MNTPTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTG 532
FG ++ V R YRAPEVI +Q DV+S G +L+E G
Sbjct: 181 FGSATYDDEHHSTLVXXRH--YRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 94 ILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS--SLSPQLNWVDLSFNSITGN 151
IL++ N++S S++LSLS LR L + +N S + +L ++DLS N +
Sbjct: 25 ILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKI 84
Query: 152 IPASIRNLSHLVGLNLQNNSLTGF--IPNF-NLSRLRHLNLSYNHLNGS--VPLA 201
NL HL +L N+ F N+S+L+ L LS HL S +P+A
Sbjct: 85 SCHPTVNLKHL---DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIA 136
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 24/211 (11%)
Query: 341 AEVLGKGSYGTTYKAI-----LEEGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQHP 392
E LG G + K LE + KR + + E E+++ ++ R HP
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL-RQVLHP 75
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
N++ + Y ++ + +L+ + + G L + + S +K L G+ +
Sbjct: 76 NIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILD---GVNY 130
Query: 453 IHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTPLMNTPTVPSRSAG---YRAP 505
+H F ++K N+ LL +++ + DFGL + G + AP
Sbjct: 131 LHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
E++ + ++D++S GV+ +L+G +P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 38/224 (16%)
Query: 344 LGKGSYGTTYKAI-LEEGTTVVVKRLK-----EVVMGK--REFEQQMEVVGRLSQHPNVV 395
LG+G+YG YKAI TV +KR++ E V G RE E+ QH N++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-----QHRNII 96
Query: 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISL--GSAKGIAHI 453
+++ L++++ E + + + P D RV S G+
Sbjct: 97 ELKSVIHHNHRLHLIFEYAENDL-------KKYMDKNP-DVSMRVIKSFLYQLINGVNFC 148
Query: 454 HAAVGGKFILGNIKSSNVLLS-QDLQGC----ISDFGLTPLMNTP----TVPSRSAGYRA 504
H+ + + ++K N+LLS D I DFGL P T + YR
Sbjct: 149 HSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 505 PEVIETKKPTQKS-DVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547
PE++ + S D++S + EML K P+ PG ++ L
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLM-KTPL-FPGDSEIDQL 247
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 39/249 (15%)
Query: 311 SGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVK--RL 368
SGV +N ++F+ S + +L+ +G G ++ + E+ +K L
Sbjct: 9 SGVDLGTEN--LYFQSMSVKGRIYSILKQ----IGSGGSSKVFQVLNEKKQIYAIKYVNL 62
Query: 369 KEVVMGKRE-FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS--FSALLHG 425
+E + + ++ + +L QH + + IR Y + ++ +Y +E G+ ++ L
Sbjct: 63 EEADNQTLDSYRNEIAYLNKLQQHSDKI-IRLYDYEITDQY-IYMVMECGNIDLNSWLKK 120
Query: 426 NRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG 485
+ I P + +S K L + I H H V ++K +N L+ + I DFG
Sbjct: 121 KKSID--PWERKSYWKNMLEAVHTI-HQHGIVHS-----DLKPANFLIVDGMLKLI-DFG 171
Query: 486 LTPLMN---TPTVPSRSAG---YRAPEVIETKKPTQKS-----------DVYSFGVLLLE 528
+ M T V G Y PE I+ ++++ DV+S G +L
Sbjct: 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231
Query: 529 MLTGKAPIQ 537
M GK P Q
Sbjct: 232 MTYGKTPFQ 240
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEV-VGRLSQHPNVVPIRAY 400
+LG+G+YG A + G V +K+++ E+ + + +H N++ I
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI--- 74
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGN--RGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
F+ +F E L+ + R I L + + + + +H G
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---G 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN----------------TPTVPSRSAGY 502
I ++K SN+L++ + + DFGL +++ T V +R Y
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR--WY 188
Query: 503 RAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
RAPEV+ T K ++ DV+S G +L E+ + PI PG +
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI-FPGRD 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 332 DLEDLLRASA--EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVVMGKR--EFEQQMEVVG 386
D ++LL+ E +G G + A + G V +K + + +G + ++E +
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 387 RLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGS 446
L +H ++ + + ++ +V ++ G + I + L E +
Sbjct: 64 NL-RHQHICQLYHVLETANKIFMVLEYCPGGELFDYI-----ISQDRLSEEETRVVFRQI 117
Query: 447 AKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT--PLMNTPTVPSRSAG--- 501
+A++H+ + ++K N+L + + + DFGL P N G
Sbjct: 118 VSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 502 YRAPEVIETKKPT-QKSDVYSFGVLLLEMLTGKAPIQAPG----HEDVV----DLPRWV 551
Y APE+I+ K ++DV+S G+LL ++ G P ++ ++ D+P+W+
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWL 233
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 125 NFSGNIPSSLSPQLNWVDLSFNSITGNIPASIR---NLSHLVGLNLQNNSLTGFIPNFNL 181
NFS N + ++P N L + N A I NL++L GL L NN +T P NL
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNL 128
Query: 182 SRLRHLNLSYNHLNGSVPLA-LQKFPPSSFEGNSMLCGPPLNQCSTV 227
+ L L LS N ++ L+ L SF N + PL +T+
Sbjct: 129 TNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTL 175
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 85 TLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144
TLE+LD + SN +S D+ S + L++L L NN S P + L+ + L+
Sbjct: 174 TLERLD------ISSNKVS-DI-SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLN 225
Query: 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLA 201
N + ++ +L++L L+L NN ++ P L++L L L N ++ PLA
Sbjct: 226 GNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLA 280
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 125 NFSGNIPSSLSPQLNWVDLSFNSITGNIPASIR---NLSHLVGLNLQNNSLTGFIPNFNL 181
NFS N + ++P N L + N A I NL++L GL L NN +T P NL
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNL 128
Query: 182 SRLRHLNLSYNHLNGSVPLA-LQKFPPSSFEGNSMLCGPPLNQCSTV 227
+ L L LS N ++ L+ L SF N + PL +T+
Sbjct: 129 TNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTL 175
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 85 TLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144
TLE+LD + SN +S D+ S + L++L L NN S P + L+ + L+
Sbjct: 174 TLERLD------ISSNKVS-DI-SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLN 225
Query: 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLA 201
N + ++ +L++L L+L NN ++ P L++L L L N ++ PLA
Sbjct: 226 GNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLA 280
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 332 DLEDLLRASAEVLGKGSYGTTYKAILEEGTT-------VVVKRLKEVVMG--KREFEQQM 382
D+ED E LG G + K ++GT + +RL G + E E+++
Sbjct: 9 DVEDHYEMGEE-LGSGQFAIVRKC-RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREV 66
Query: 383 EVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKI 442
++ R +HPN++ + + +K + +L+ + + G L + L + +
Sbjct: 67 NIL-REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQF 120
Query: 443 SLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTPLMNTPTVPSR 498
G+ ++H+ F ++K N+ LL +++ + + DFG+ +
Sbjct: 121 LKQILDGVHYLHSKRIAHF---DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 177
Query: 499 SAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 129 NIPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN--FNLSRLRH 186
+IPS L+ + +DLSFN IT +R ++L L L+++ + + ++L L H
Sbjct: 45 SIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEH 104
Query: 187 LNLSYNHLNG 196
L+LS NHL+
Sbjct: 105 LDLSDNHLSS 114
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 89 LDSLMILSLRSNHL--SGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLSFN 146
L+ ++++ L +N L SG + L ++ + + N + IP L P L + L N
Sbjct: 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHLDGN 202
Query: 147 SITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLS---RLRHLNLSYNHL 194
IT AS++ L++L L L NS++ + N +L+ LR L+L+ N L
Sbjct: 203 KITKVDAASLKGLNNLAKLGLSFNSISA-VDNGSLANTPHLRELHLNNNKL 252
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 130 IPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN--FNLSRLRHL 187
+P L P +DL N IT +NL +L L L NN ++ P L +L L
Sbjct: 46 VPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERL 105
Query: 188 NLSYNHL 194
LS N L
Sbjct: 106 YLSKNQL 112
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEV-VGRLSQHPNVVPIRAY 400
+LG+G+YG A + G V +K+++ E+ + + +H N++ I
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI--- 74
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGN--RGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
F+ +F E L+ + R I L + + + + +H G
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---G 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN----------------TPTVPSRSAGY 502
I ++K SN+L++ + + DFGL +++ T V +R Y
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR--WY 188
Query: 503 RAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
RAPEV+ T K ++ DV+S G +L E+ + PI PG +
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI-FPGRD 227
>pdb|1NBM|E Chain E, The Structure Of Bovine F1-Atpase Covalently Inhibited
With 4-Chloro-7-Nitrobenzofurazan
Length = 480
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 24 NSDKQALLDFAANVPHARKLNWNSSTSVCTSWVGITCTKNGS--RVLAVRLPGVGLYGPI 81
S+ ALL +P A +T + T IT TK GS V A+ +P L P
Sbjct: 269 GSEVSALL---GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIXVPADDLTDPA 325
Query: 82 PANTLEKLDSLMILS 96
PA T LD+ +LS
Sbjct: 326 PATTFAHLDATTVLS 340
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 129 NIPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN--FNLSRLRH 186
+IPS L+ + +DLSFN IT +R ++L L L+++ + + ++L L H
Sbjct: 19 SIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEH 78
Query: 187 LNLSYNHLNG 196
L+LS NHL+
Sbjct: 79 LDLSDNHLSS 88
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS--FSALLHGNRGIGRTPLD 435
+ ++ + +L QH + + IR Y + ++ +Y +E G+ ++ L + I P +
Sbjct: 57 YRNEIAYLNKLQQHSDKI-IRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSID--PWE 112
Query: 436 WESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---T 492
+S K L + I H H V ++K +N L+ + I DFG+ M T
Sbjct: 113 RKSYWKNMLEAVHTI-HQHGIVHS-----DLKPANFLIVDGMLKLI-DFGIANQMQPDTT 165
Query: 493 PTVPSRSAG---YRAPEVIETKKPTQKS-----------DVYSFGVLLLEMLTGKAPIQ 537
V G Y PE I+ ++++ DV+S G +L M GK P Q
Sbjct: 166 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE----QQMEVVGRLS--QHPNVVPI 397
+G G+YGT YKA V + V G+ +++ ++ RL +HPNVV +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 398 RAYYFSK--DEKL---LVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKG 449
+ D ++ LV++ ++ + L + P L E+ + +G
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYL-------DKAPPPGLPAETIKDLMRQFLRG 124
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN-----TPTVPSRSAGYRA 504
+ +HA + ++K N+L++ ++DFGL + + P V + YRA
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV--VTLWYRA 179
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGK 533
PEV+ D++S G + EM K
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 89 LDSLMILSLRSNHL--SGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLSFN 146
L+ ++++ L +N L SG + L ++ + + N + IP L P L + L N
Sbjct: 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHLDGN 202
Query: 147 SITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLS---RLRHLNLSYNHL 194
IT AS++ L++L L L NS++ + N +L+ LR L+L+ N L
Sbjct: 203 KITKVDAASLKGLNNLAKLGLSFNSISA-VDNGSLANTPHLRELHLNNNKL 252
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 130 IPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN--FNLSRLRHL 187
+P L P +DL N IT +NL +L L L NN ++ P L +L L
Sbjct: 46 VPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERL 105
Query: 188 NLSYNHL 194
LS N L
Sbjct: 106 YLSKNQL 112
>pdb|4ASU|D Chain D, F1-Atpase In Which All Three Catalytic Sites Contain Bound
Nucleotide, With Magnesium Ion Released In The Empty
Site
pdb|4ASU|E Chain E, F1-Atpase In Which All Three Catalytic Sites Contain Bound
Nucleotide, With Magnesium Ion Released In The Empty
Site
pdb|4ASU|F Chain F, F1-Atpase In Which All Three Catalytic Sites Contain Bound
Nucleotide, With Magnesium Ion Released In The Empty
Site
Length = 480
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 24 NSDKQALLDFAANVPHARKLNWNSSTSVCTSWVGITCTKNGS--RVLAVRLPGVGLYGPI 81
S+ ALL +P A +T + T IT TK GS V A+ +P L P
Sbjct: 267 GSEVSALL---GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPA 323
Query: 82 PANTLEKLDSLMILS 96
PA T LD+ +LS
Sbjct: 324 PATTFAHLDATTVLS 338
>pdb|1NBM|D Chain D, The Structure Of Bovine F1-Atpase Covalently Inhibited
With 4-Chloro-7-Nitrobenzofurazan
pdb|1NBM|F Chain F, The Structure Of Bovine F1-Atpase Covalently Inhibited
With 4-Chloro-7-Nitrobenzofurazan
Length = 480
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 24 NSDKQALLDFAANVPHARKLNWNSSTSVCTSWVGITCTKNGS--RVLAVRLPGVGLYGPI 81
S+ ALL +P A +T + T IT TK GS V A+ +P L P
Sbjct: 269 GSEVSALL---GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPA 325
Query: 82 PANTLEKLDSLMILS 96
PA T LD+ +LS
Sbjct: 326 PATTFAHLDATTVLS 340
>pdb|1MAB|B Chain B, Rat Liver F1-Atpase
pdb|2F43|B Chain B, Rat Liver F1-atpase
Length = 479
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 24 NSDKQALLDFAANVPHARKLNWNSSTSVCTSWVGITCTKNGS--RVLAVRLPGVGLYGPI 81
S+ ALL +P A +T + T IT TK GS V A+ +P L P
Sbjct: 265 GSEVSALL---GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPA 321
Query: 82 PANTLEKLDSLMILS 96
PA T LD+ +LS
Sbjct: 322 PATTFAHLDATTVLS 336
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 440 VKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN-------- 491
+ I + A+ + +H+ + ++K SN+ + D + DFGL M+
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 492 -TPTVPSRSAG--------YRAPEVIETKKPTQKSDVYSFGVLLLEML 530
TP +P+ + Y +PE I + K D++S G++L E+L
Sbjct: 224 LTP-MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2XND|D Chain D, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
Synthase
pdb|2XND|E Chain E, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
Synthase
pdb|2XND|F Chain F, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
Synthase
Length = 467
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 24 NSDKQALLDFAANVPHARKLNWNSSTSVCTSWVGITCTKNGS--RVLAVRLPGVGLYGPI 81
S+ ALL +P A +T + T IT TK GS V A+ +P L P
Sbjct: 257 GSEVSALL---GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPA 313
Query: 82 PANTLEKLDSLMILS 96
PA T LD+ +LS
Sbjct: 314 PATTFAHLDATTVLS 328
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS--FSALLHGNRGIGRTPLD 435
+ ++ + +L QH + + IR Y + ++ +Y +E G+ ++ L + I P +
Sbjct: 54 YRNEIAYLNKLQQHSDKI-IRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSID--PWE 109
Query: 436 WESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---T 492
+S K L + I H H V ++K +N L+ + I DFG+ M T
Sbjct: 110 RKSYWKNMLEAVHTI-HQHGIVHS-----DLKPANFLIVDGMLKLI-DFGIANQMQPDTT 162
Query: 493 PTVPSRSAG---YRAPEVIETKKPTQKS-----------DVYSFGVLLLEMLTGKAPIQ 537
V G Y PE I+ ++++ DV+S G +L M GK P Q
Sbjct: 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|1COW|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
pdb|1COW|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
pdb|1COW|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
pdb|1EFR|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
Antibiotic Efrapeptin
pdb|1EFR|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
Antibiotic Efrapeptin
pdb|1EFR|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
Antibiotic Efrapeptin
pdb|1BMF|D Chain D, Bovine Mitochondrial F1-Atpase
pdb|1BMF|E Chain E, Bovine Mitochondrial F1-Atpase
pdb|1BMF|F Chain F, Bovine Mitochondrial F1-Atpase
pdb|1QO1|D Chain D, Molecular Architecture Of The Rotary Motor In Atp Synthase
From Yeast Mitochondria
pdb|1QO1|E Chain E, Molecular Architecture Of The Rotary Motor In Atp Synthase
From Yeast Mitochondria
pdb|1QO1|F Chain F, Molecular Architecture Of The Rotary Motor In Atp Synthase
From Yeast Mitochondria
pdb|1E1Q|D Chain D, Bovine Mitochondrial F1-Atpase At 100k
pdb|1E1Q|E Chain E, Bovine Mitochondrial F1-Atpase At 100k
pdb|1E1Q|F Chain F, Bovine Mitochondrial F1-Atpase At 100k
pdb|1E1R|D Chain D, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
Aluminium Fluoride
pdb|1E1R|E Chain E, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
Aluminium Fluoride
pdb|1E1R|F Chain F, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
Aluminium Fluoride
pdb|1E79|E Chain E, Bovine F1-Atpase Inhibited By Dccd
(Dicyclohexylcarbodiimide)
pdb|1E79|F Chain F, Bovine F1-Atpase Inhibited By Dccd
(Dicyclohexylcarbodiimide)
pdb|1H8H|D Chain D, Bovine Mitochondrial F1-Atpase Crystallised In The
Presence Of 5mm Amppnp
pdb|1H8H|E Chain E, Bovine Mitochondrial F1-Atpase Crystallised In The
Presence Of 5mm Amppnp
pdb|1H8H|F Chain F, Bovine Mitochondrial F1-Atpase Crystallised In The
Presence Of 5mm Amppnp
pdb|1H8E|D Chain D, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
Sites Occupied)
pdb|1H8E|E Chain E, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
Sites Occupied)
pdb|1H8E|F Chain F, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
Sites Occupied)
pdb|1OHH|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With The
Inhibitor Protein If1
pdb|1OHH|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With The
Inhibitor Protein If1
pdb|1OHH|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With The
Inhibitor Protein If1
pdb|1W0J|D Chain D, Beryllium Fluoride Inhibited Bovine F1-Atpase
pdb|1W0J|E Chain E, Beryllium Fluoride Inhibited Bovine F1-Atpase
pdb|1W0J|F Chain F, Beryllium Fluoride Inhibited Bovine F1-Atpase
pdb|1W0K|D Chain D, Beryllium Fluoride Inhibited Bovine F1-Atpase
pdb|1W0K|E Chain E, Beryllium Fluoride Inhibited Bovine F1-Atpase
pdb|1W0K|F Chain F, Beryllium Fluoride Inhibited Bovine F1-Atpase
pdb|2CK3|D Chain D, Azide Inhibited Bovine F1-Atpase
pdb|2CK3|E Chain E, Azide Inhibited Bovine F1-Atpase
pdb|2CK3|F Chain F, Azide Inhibited Bovine F1-Atpase
pdb|2JDI|D Chain D, Ground State Structure Of F1-Atpase From Bovine Heart
Mitochondria (Bovine F1-Atpase Crystallised In The
Absence Of Azide)
pdb|2JDI|E Chain E, Ground State Structure Of F1-Atpase From Bovine Heart
Mitochondria (Bovine F1-Atpase Crystallised In The
Absence Of Azide)
pdb|2JDI|F Chain F, Ground State Structure Of F1-Atpase From Bovine Heart
Mitochondria (Bovine F1-Atpase Crystallised In The
Absence Of Azide)
pdb|2JIZ|D Chain D, The Structure Of F1-Atpase Inhibited By Resveratrol.
pdb|2JIZ|E Chain E, The Structure Of F1-Atpase Inhibited By Resveratrol.
pdb|2JIZ|F Chain F, The Structure Of F1-Atpase Inhibited By Resveratrol.
pdb|2JIZ|K Chain K, The Structure Of F1-Atpase Inhibited By Resveratrol.
pdb|2JIZ|L Chain L, The Structure Of F1-Atpase Inhibited By Resveratrol.
pdb|2JIZ|M Chain M, The Structure Of F1-Atpase Inhibited By Resveratrol.
pdb|2JJ1|D Chain D, The Structure Of F1-Atpase Inhibited By Piceatannol.
pdb|2JJ1|E Chain E, The Structure Of F1-Atpase Inhibited By Piceatannol.
pdb|2JJ1|F Chain F, The Structure Of F1-Atpase Inhibited By Piceatannol.
pdb|2JJ1|K Chain K, The Structure Of F1-Atpase Inhibited By Piceatannol.
pdb|2JJ1|L Chain L, The Structure Of F1-Atpase Inhibited By Piceatannol.
pdb|2JJ1|M Chain M, The Structure Of F1-Atpase Inhibited By Piceatannol.
pdb|2JJ2|D Chain D, The Structure Of F1-atpase Inhibited By Quercetin.
pdb|2JJ2|E Chain E, The Structure Of F1-atpase Inhibited By Quercetin.
pdb|2JJ2|F Chain F, The Structure Of F1-atpase Inhibited By Quercetin.
pdb|2JJ2|K Chain K, The Structure Of F1-atpase Inhibited By Quercetin.
pdb|2JJ2|L Chain L, The Structure Of F1-atpase Inhibited By Quercetin.
pdb|2JJ2|M Chain M, The Structure Of F1-atpase Inhibited By Quercetin.
pdb|2V7Q|D Chain D, The Structure Of F1-Atpase Inhibited By I1-60his, A
Monomeric Form Of The Inhibitor Protein, If1.
pdb|2V7Q|E Chain E, The Structure Of F1-Atpase Inhibited By I1-60his, A
Monomeric Form Of The Inhibitor Protein, If1.
pdb|2V7Q|F Chain F, The Structure Of F1-Atpase Inhibited By I1-60his, A
Monomeric Form Of The Inhibitor Protein, If1.
pdb|2WSS|D Chain D, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
pdb|2WSS|E Chain E, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
pdb|2WSS|F Chain F, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
pdb|2WSS|M Chain M, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
pdb|2WSS|N Chain N, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
pdb|2WSS|O Chain O, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
pdb|1E79|D Chain D, Bovine F1-Atpase Inhibited By Dccd
(Dicyclohexylcarbodiimide)
Length = 482
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 24 NSDKQALLDFAANVPHARKLNWNSSTSVCTSWVGITCTKNGS--RVLAVRLPGVGLYGPI 81
S+ ALL +P A +T + T IT TK GS V A+ +P L P
Sbjct: 269 GSEVSALL---GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPA 325
Query: 82 PANTLEKLDSLMILS 96
PA T LD+ +LS
Sbjct: 326 PATTFAHLDATTVLS 340
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 113 LSSLRFLYLQNNNFSGN-IPSSLSP--QLNWVDLSFNSITGNIPASIRNLSHLVGLNLQN 169
LSSL L + N+F N +P + L ++DLS + P + +LS L LN+ +
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 170 NSLTGF--IPNFNLSRLRHLNLSYNHLNGSVPLALQKFPPS 208
N+ P L+ L+ L+ S NH+ S LQ FP S
Sbjct: 209 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 249
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS--FSALLHGNRGIGRTPLD 435
+ ++ + +L QH + + IR Y + ++ +Y +E G+ ++ L + I P +
Sbjct: 101 YRNEIAYLNKLQQHSDKI-IRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSID--PWE 156
Query: 436 WESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---T 492
+S K L + I H H V ++K +N L+ + I DFG+ M T
Sbjct: 157 RKSYWKNMLEAVHTI-HQHGIVHS-----DLKPANFLIVDGMLKLI-DFGIANQMQPDTT 209
Query: 493 PTVPSRSAG---YRAPEVIETKKPTQKS-----------DVYSFGVLLLEMLTGKAPIQ 537
V G Y PE I+ ++++ DV+S G +L M GK P Q
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS--FSALLHGNRGIGRTPLD 435
+ ++ + +L QH + + IR Y + ++ +Y +E G+ ++ L + I P +
Sbjct: 53 YRNEIAYLNKLQQHSDKI-IRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSI--DPWE 108
Query: 436 WESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---T 492
+S K L + I H H V ++K +N L+ + I DFG+ M T
Sbjct: 109 RKSYWKNMLEAVHTI-HQHGIVHS-----DLKPANFLIVDGMLKLI-DFGIANQMQPDTT 161
Query: 493 PTVPSRSAG---YRAPEVIETKKPTQKS-----------DVYSFGVLLLEMLTGKAPIQ 537
V G Y PE I+ ++++ DV+S G +L M GK P Q
Sbjct: 162 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 113 LSSLRFLYLQNNNFSGN-IPSSLSP--QLNWVDLSFNSITGNIPASIRNLSHLVGLNLQN 169
LSSL L + N+F N +P + L ++DLS + P + +LS L LN+ +
Sbjct: 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527
Query: 170 NSLTGF--IPNFNLSRLRHLNLSYNHLNGSVPLALQKFPPS 208
N+ P L+ L+ L+ S NH+ S LQ FP S
Sbjct: 528 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 568
>pdb|2W6E|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
1.
pdb|2W6E|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
1.
pdb|2W6E|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
1.
pdb|2W6F|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
2.
pdb|2W6F|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
2.
pdb|2W6F|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
2.
pdb|2W6I|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
4b.
pdb|2W6I|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
4b.
pdb|2W6I|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
4b.
pdb|2W6J|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
5.
pdb|2W6J|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
5.
pdb|2W6J|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
5.
pdb|2W6G|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
3.
pdb|2W6G|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
3.
pdb|2W6G|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
3.
pdb|2W6H|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
4a.
pdb|2W6H|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
4a.
pdb|2W6H|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
4a
Length = 528
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 24 NSDKQALLDFAANVPHARKLNWNSSTSVCTSWVGITCTKNGS--RVLAVRLPGVGLYGPI 81
S+ ALL +P A +T + T IT TK GS V A+ +P L P
Sbjct: 315 GSEVSALL---GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPA 371
Query: 82 PANTLEKLDSLMILS 96
PA T LD+ +LS
Sbjct: 372 PATTFAHLDATTVLS 386
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE----QQMEVVGRLS--QHPNVVPI 397
+G G+YGT YKA V + V G+ +++ ++ RL +HPNVV +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 398 RAYYFSK--DEKL---LVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKG 449
+ D ++ LV++ ++ + L + P L E+ + +G
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYL-------DKAPPPGLPAETIKDLMRQFLRG 124
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN-----TPTVPSRSAGYRA 504
+ +HA + ++K N+L++ ++DFGL + + P V + YRA
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV--VTLWYRA 179
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGK 533
PEV+ D++S G + EM K
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 32/221 (14%)
Query: 343 VLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEV-VGRLSQHPNVVPIRAY 400
+LG+G+YG A + G V +K+++ E+ + + +H N++ I
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI--- 74
Query: 401 YFSKDEKLLVYDFIEAGSFSALLHGN--RGIGRTPLDWESRVKISLGSAKGIAHIHAAVG 458
F+ +F E L+ + R I L + + + + +H G
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---G 130
Query: 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN-------TPT---------VPSRSAGY 502
I ++K SN+L++ + + DFGL +++ PT V +R Y
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR--WY 188
Query: 503 RAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542
RAPEV+ T K ++ DV+S G +L E+ + PI PG +
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI-FPGRD 227
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFE----QQMEVVGRLS--QHPNVVPI 397
+G G+YGT YKA V + V G+ +++ ++ RL +HPNVV +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 398 RAYYFSK--DEKL---LVYDFIEAGSFSALLHGNRGIGRTP---LDWESRVKISLGSAKG 449
+ D ++ LV++ ++ + L + P L E+ + +G
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYL-------DKAPPPGLPAETIKDLMRQFLRG 124
Query: 450 IAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT-----PTVPSRSAGYRA 504
+ +HA + ++K N+L++ ++DFGL + + P V + YRA
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV--VTLWYRA 179
Query: 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGK 533
PEV+ D++S G + EM K
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + E E+++ ++ R +HPN++ + + +K + +L+ + + G L +
Sbjct: 71 VSREEIEREVNIL-REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKE 124
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L + + G+ ++H+ F ++K N+ LL +++ + + DFG+
Sbjct: 125 SLTEDEATQFLKQILDGVHYLHSKRIAHF---DLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
+ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 182 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 113 LSSLRFLYLQNNNFSGN-IPSSLSP--QLNWVDLSFNSITGNIPASIRNLSHLVGLNLQN 169
LSSL L + N+F N +P + L ++DLS + P + +LS L LN+ +
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 503
Query: 170 NSLTGF--IPNFNLSRLRHLNLSYNHLNGSVPLALQKFPPS 208
N+ P L+ L+ L+ S NH+ S LQ FP S
Sbjct: 504 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 544
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/170 (18%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 373 MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRT 432
+ + E E+++ ++ R +HPN++ + + +K + +L+ + + G L +
Sbjct: 50 VSREEIEREVNIL-REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKE 103
Query: 433 PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTP 488
L + + G+ ++H+ F ++K N+ LL +++ + + DFG+
Sbjct: 104 SLTEDEATQFLKQILDGVHYLHSKRIAHF---DLKPENIMLLDKNVPNPRIKLIDFGIAH 160
Query: 489 LMNTPTVPSRSAG---YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAP 535
+ G + APE++ + ++D++S GV+ +L+G +P
Sbjct: 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 448 KGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN-----TPTVPSRSAGY 502
+G+ +HA + ++K N+L++ ++DFGL + + TP V + Y
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV--VTLWY 185
Query: 503 RAPEVIETKKPTQKSDVYSFGVLLLEMLTGK 533
RAPEV+ D++S G + EM K
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS--FSALLHGNRGIGRTPLD 435
+ ++ + +L QH + + IR Y + ++ +Y +E G+ ++ L + I P +
Sbjct: 101 YRNEIAYLNKLQQHSDKI-IRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSI--DPWE 156
Query: 436 WESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---T 492
+S K L + I H H V ++K +N L+ + I DFG+ M T
Sbjct: 157 RKSYWKNMLEAVHTI-HQHGIVHS-----DLKPANFLIVDGMLKLI-DFGIANQMQPDTT 209
Query: 493 PTVPSRSAG---YRAPEVIETKKPTQKS-----------DVYSFGVLLLEMLTGKAPIQ 537
V G Y PE I+ ++++ DV+S G +L M GK P Q
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 378 FEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS--FSALLHGNRGIGRTPLD 435
+ ++ + +L QH + + IR Y + ++ +Y +E G+ ++ L + I P +
Sbjct: 101 YRNEIAYLNKLQQHSDKI-IRLYDYEITDQY-IYMVMECGNIDLNSWLKKKKSI--DPWE 156
Query: 436 WESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN---T 492
+S K L + I H H V ++K +N L+ + I DFG+ M T
Sbjct: 157 RKSYWKNMLEAVHTI-HQHGIVHS-----DLKPANFLIVDGMLKLI-DFGIANQMQPDTT 209
Query: 493 PTVPSRSAG---YRAPEVIETKKPTQKS-----------DVYSFGVLLLEMLTGKAPIQ 537
V G Y PE I+ ++++ DV+S G +L M GK P Q
Sbjct: 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 502 YRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGH 541
YRAPEVI SD++SFG +L E+ TG + H
Sbjct: 225 YRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH 264
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 125 NFSGNIPSSLSPQLNWVDLSFNSITGNIPASIR---NLSHLVGLNLQNNSLTGFIPNFNL 181
NFS N + ++P N L + N A I NL++L GL L NN +T P NL
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNL 128
Query: 182 SRLRHLNLSYNHLNGSVPLA-LQKFPPSSFEGNSMLCGPPLNQCSTV 227
+ L L LS N ++ L+ L +F N + PL +T+
Sbjct: 129 TNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTL 175
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 85 TLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144
TLE+LD + SN +S D+ S + L++L L NN S P + L+ + L+
Sbjct: 174 TLERLD------ISSNKVS-DI-SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLN 225
Query: 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLA 201
N + ++ +L++L L+L NN ++ P L++L L L N ++ PLA
Sbjct: 226 GNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLA 280
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 24/211 (11%)
Query: 341 AEVLGKGSYGTTYKAI-----LEEGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQHP 392
E LG G + K LE + KR + + E E+++ ++ ++ H
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH- 75
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
NV+ + Y ++ + +L+ + + G L + L E G+ +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNY 130
Query: 453 IHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTPLMNTPTVPSRSAG---YRAP 505
+H F ++K N+ LL +++ + DFGL + G + AP
Sbjct: 131 LHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
E++ + ++D++S GV+ +L+G +P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 24/211 (11%)
Query: 341 AEVLGKGSYGTTYKAI-----LEEGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQHP 392
E LG G + K LE + KR + + E E+++ ++ ++ H
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH- 75
Query: 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452
NV+ + Y ++ + +L+ + + G L + L E G+ +
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNY 130
Query: 453 IHAAVGGKFILGNIKSSNV-LLSQDL---QGCISDFGLTPLMNTPTVPSRSAG---YRAP 505
+H F ++K N+ LL +++ + DFGL + G + AP
Sbjct: 131 LHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 506 EVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536
E++ + ++D++S GV+ +L+G +P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,041,614
Number of Sequences: 62578
Number of extensions: 728498
Number of successful extensions: 4035
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 591
Number of HSP's that attempted gapping in prelim test: 2151
Number of HSP's gapped (non-prelim): 1318
length of query: 632
length of database: 14,973,337
effective HSP length: 105
effective length of query: 527
effective length of database: 8,402,647
effective search space: 4428194969
effective search space used: 4428194969
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)