Query 006747
Match_columns 632
No_of_seqs 497 out of 4518
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 07:53:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006747.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006747hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 1.1E-53 3.7E-58 436.9 20.2 249 341-610 31-305 (308)
2 4aoj_A High affinity nerve gro 100.0 1.6E-53 5.6E-58 439.7 20.0 251 341-612 46-320 (329)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-53 3.7E-58 435.1 14.5 250 341-611 18-289 (299)
4 3omv_A RAF proto-oncogene seri 100.0 1.2E-52 4.1E-57 427.5 21.7 248 341-611 41-300 (307)
5 3hmm_A TGF-beta receptor type- 100.0 3.8E-53 1.3E-57 433.7 13.7 261 341-613 8-299 (303)
6 4ase_A Vascular endothelial gr 100.0 3.5E-51 1.2E-55 425.7 17.0 253 341-612 69-348 (353)
7 4fih_A Serine/threonine-protei 100.0 5.2E-51 1.8E-55 420.7 16.3 239 342-605 80-324 (346)
8 4g3f_A NF-kappa-beta-inducing 100.0 7.3E-51 2.5E-55 418.3 16.2 240 342-609 64-314 (336)
9 3fpq_A Serine/threonine-protei 100.0 5.7E-50 2E-54 404.8 21.6 241 342-605 32-283 (290)
10 4b9d_A Serine/threonine-protei 100.0 1.8E-50 6E-55 417.3 17.2 240 341-604 29-276 (350)
11 4fie_A Serine/threonine-protei 100.0 1.1E-49 3.6E-54 420.9 16.8 239 342-605 157-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.3E-49 7.8E-54 402.4 14.7 237 341-604 37-284 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.7E-48 5.9E-53 390.6 20.0 236 341-604 18-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 8.5E-49 2.9E-53 398.2 12.3 237 341-604 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 8E-48 2.7E-52 392.4 16.6 239 341-604 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 2.4E-44 8.1E-49 380.7 23.2 256 341-609 59-351 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.5E-44 8.5E-49 376.5 21.2 187 341-539 26-250 (361)
18 2qkw_B Protein kinase; three-h 100.0 1.8E-43 6.2E-48 366.0 23.8 264 342-611 45-315 (321)
19 3uim_A Brassinosteroid insensi 100.0 7.3E-44 2.5E-48 369.7 18.3 269 341-612 35-312 (326)
20 3v5w_A G-protein coupled recep 100.0 6.7E-44 2.3E-48 393.0 16.2 240 341-604 194-449 (689)
21 3soc_A Activin receptor type-2 100.0 2.7E-43 9.2E-48 365.0 16.0 258 341-611 29-318 (322)
22 3uto_A Twitchin; kinase, muscl 100.0 4.6E-43 1.6E-47 388.7 18.5 243 341-605 162-411 (573)
23 3p86_A Serine/threonine-protei 100.0 1.3E-42 4.3E-47 357.7 16.7 252 341-615 42-302 (309)
24 2psq_A Fibroblast growth facto 100.0 5.7E-42 1.9E-46 361.8 18.3 251 341-611 86-364 (370)
25 3s95_A LIMK-1, LIM domain kina 100.0 9.3E-42 3.2E-46 351.3 19.0 249 341-612 15-283 (310)
26 3q4u_A Activin receptor type-1 100.0 8.8E-42 3E-46 349.6 17.5 250 341-609 13-300 (301)
27 3fxz_A Serine/threonine-protei 100.0 1E-41 3.6E-46 348.8 18.0 239 342-605 26-270 (297)
28 4hcu_A Tyrosine-protein kinase 100.0 1.9E-41 6.5E-46 341.6 19.4 247 341-612 15-267 (269)
29 2c30_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 348.1 21.9 239 342-605 51-295 (321)
30 2nru_A Interleukin-1 receptor- 100.0 1.1E-40 3.7E-45 342.7 24.4 271 329-611 13-306 (307)
31 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.1E-41 1.1E-45 339.7 19.6 247 341-612 13-265 (268)
32 1qcf_A Haematopoetic cell kina 100.0 2.5E-41 8.6E-46 366.7 19.2 247 341-612 193-445 (454)
33 3tt0_A Basic fibroblast growth 100.0 5.1E-41 1.7E-45 356.3 20.2 261 341-621 74-362 (382)
34 3kul_A Ephrin type-A receptor 100.0 2.2E-41 7.4E-46 351.1 16.9 248 341-613 54-315 (325)
35 1opk_A P150, C-ABL, proto-onco 100.0 2.4E-41 8.1E-46 370.6 17.4 248 341-612 225-479 (495)
36 3fe3_A MAP/microtubule affinit 100.0 9E-41 3.1E-45 346.5 20.0 238 341-605 20-265 (328)
37 1k9a_A Carboxyl-terminal SRC k 100.0 8.3E-41 2.8E-45 362.1 20.6 246 341-612 198-446 (450)
38 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.2E-41 1.8E-45 364.0 18.9 247 341-612 189-441 (452)
39 3gen_A Tyrosine-protein kinase 100.0 1.2E-40 4.2E-45 338.1 20.3 246 341-611 29-280 (283)
40 2qol_A Ephrin receptor; recept 100.0 4E-41 1.4E-45 355.6 16.8 247 341-612 50-310 (373)
41 3cbl_A C-FES, proto-oncogene t 100.0 1.8E-41 6.1E-46 359.1 13.3 246 341-611 119-374 (377)
42 3mdy_A Bone morphogenetic prot 100.0 2.3E-40 7.9E-45 344.7 19.9 258 341-613 42-333 (337)
43 2izr_A Casein kinase I isoform 100.0 1.9E-40 6.6E-45 344.7 19.2 251 341-611 14-281 (330)
44 3zgw_A Maternal embryonic leuc 100.0 1.2E-40 4.1E-45 347.7 17.5 238 341-605 15-261 (347)
45 4euu_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44 336.9 24.8 261 342-610 15-308 (319)
46 1csn_A Casein kinase-1; phosph 100.0 3.9E-40 1.3E-44 336.8 20.4 253 342-613 16-285 (298)
47 3ugc_A Tyrosine-protein kinase 100.0 6.7E-41 2.3E-45 342.3 14.6 254 341-612 15-292 (295)
48 4fvq_A Tyrosine-protein kinase 100.0 1.5E-40 5E-45 338.5 17.1 257 341-623 13-287 (289)
49 3dtc_A Mitogen-activated prote 100.0 1E-40 3.6E-45 336.4 15.7 245 341-609 12-271 (271)
50 1tki_A Titin; serine kinase, m 100.0 1.5E-40 5.2E-45 344.0 17.2 242 342-605 11-258 (321)
51 3niz_A Rhodanese family protei 100.0 1.4E-40 4.9E-45 342.7 16.9 251 342-604 27-300 (311)
52 1o6l_A RAC-beta serine/threoni 100.0 6.1E-40 2.1E-44 341.3 21.7 238 341-605 10-261 (337)
53 4dc2_A Protein kinase C IOTA t 100.0 5.4E-40 1.9E-44 348.2 21.6 240 341-599 57-307 (396)
54 3vhe_A Vascular endothelial gr 100.0 1E-40 3.5E-45 350.7 15.7 252 341-611 27-355 (359)
55 4eqm_A Protein kinase; transfe 100.0 1.1E-39 3.9E-44 333.2 22.5 253 342-616 17-280 (294)
56 2h8h_A Proto-oncogene tyrosine 100.0 2.5E-40 8.5E-45 365.8 19.0 247 341-612 272-524 (535)
57 3t9t_A Tyrosine-protein kinase 100.0 3.8E-40 1.3E-44 331.4 18.6 247 341-612 13-265 (267)
58 3lb7_A RAF proto-oncogene seri 100.0 2E-39 6.8E-44 333.5 24.0 249 341-612 41-301 (307)
59 3kn6_A Ribosomal protein S6 ki 100.0 1.7E-40 5.8E-45 344.3 16.1 247 342-605 17-271 (325)
60 1luf_A Muscle-specific tyrosin 100.0 1.9E-40 6.6E-45 346.3 16.6 252 341-613 52-337 (343)
61 2y0a_A Death-associated protei 100.0 2.6E-40 9E-45 343.0 17.3 242 341-605 16-272 (326)
62 2yab_A Death-associated protei 100.0 6.8E-40 2.3E-44 344.1 20.5 241 341-604 17-272 (361)
63 3poz_A Epidermal growth factor 100.0 1.2E-40 4E-45 345.9 14.4 245 341-611 20-278 (327)
64 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-40 4.5E-45 351.0 15.0 251 341-612 76-346 (367)
65 3op5_A Serine/threonine-protei 100.0 5.1E-40 1.8E-44 346.3 18.9 255 341-611 40-329 (364)
66 3qd2_B Eukaryotic translation 100.0 3.3E-40 1.1E-44 342.5 17.0 240 341-605 11-326 (332)
67 2eva_A TAK1 kinase - TAB1 chim 100.0 7.5E-40 2.6E-44 336.7 19.5 250 341-612 13-264 (307)
68 3txo_A PKC-L, NPKC-ETA, protei 100.0 3E-40 1E-44 345.9 16.6 238 341-604 28-280 (353)
69 4f0f_A Serine/threonine-protei 100.0 8.1E-40 2.8E-44 332.8 19.3 244 342-609 25-287 (287)
70 1nxk_A MAP kinase-activated pr 100.0 1.3E-39 4.4E-44 347.2 21.6 243 342-605 68-322 (400)
71 3gxj_A TGF-beta receptor type- 100.0 7.4E-42 2.5E-46 350.4 4.2 255 341-613 8-299 (303)
72 3tki_A Serine/threonine-protei 100.0 2.8E-40 9.6E-45 342.4 15.7 241 341-605 12-262 (323)
73 3c0i_A Peripheral plasma membr 100.0 5.4E-40 1.8E-44 344.3 18.1 244 341-604 29-286 (351)
74 3kmu_A ILK, integrin-linked ki 100.0 6.3E-40 2.2E-44 330.2 17.8 248 341-611 15-270 (271)
75 3uc3_A Serine/threonine-protei 100.0 8.2E-40 2.8E-44 344.1 19.1 244 341-605 25-275 (361)
76 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-39 4.3E-44 338.7 20.2 237 341-605 14-259 (336)
77 3a8x_A Protein kinase C IOTA t 100.0 1.1E-39 3.9E-44 340.6 19.8 245 341-604 14-275 (345)
78 3qup_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 341.4 15.8 252 341-613 28-300 (323)
79 2zv2_A Calcium/calmodulin-depe 100.0 4.1E-40 1.4E-44 337.0 15.9 238 341-604 18-292 (298)
80 3g2f_A Bone morphogenetic prot 100.0 6.6E-40 2.3E-44 341.3 17.7 263 341-616 18-323 (336)
81 2x4f_A Myosin light chain kina 100.0 7E-40 2.4E-44 346.0 18.0 241 342-604 95-342 (373)
82 3p1a_A MYT1 kinase, membrane-a 100.0 6.1E-40 2.1E-44 338.0 17.0 236 341-604 62-304 (311)
83 1rjb_A FL cytokine receptor; k 100.0 6.4E-40 2.2E-44 342.7 17.4 254 341-613 50-336 (344)
84 2bdw_A Hypothetical protein K1 100.0 2.3E-39 8E-44 340.7 21.6 242 341-605 34-285 (362)
85 3llt_A Serine/threonine kinase 100.0 1.9E-40 6.6E-45 348.9 13.3 192 341-539 40-262 (360)
86 4fr4_A YANK1, serine/threonine 100.0 9.2E-40 3.2E-44 345.2 18.5 240 341-604 20-271 (384)
87 2ozo_A Tyrosine-protein kinase 100.0 1.6E-39 5.4E-44 364.6 21.3 242 343-610 343-597 (613)
88 1fot_A TPK1 delta, CAMP-depend 100.0 1.5E-39 5.2E-44 335.7 19.2 237 341-604 11-258 (318)
89 1u5q_A Serine/threonine protei 100.0 1.5E-39 5.1E-44 340.3 19.3 241 341-606 59-307 (348)
90 3kfa_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 335.6 14.0 247 341-611 18-271 (288)
91 1xjd_A Protein kinase C, theta 100.0 7E-40 2.4E-44 341.8 16.6 237 341-603 22-268 (345)
92 1t46_A HOMO sapiens V-KIT hard 100.0 7.8E-40 2.7E-44 337.1 16.6 253 341-612 28-308 (313)
93 3kex_A Receptor tyrosine-prote 100.0 3E-40 1E-44 342.5 13.5 246 341-612 18-277 (325)
94 3soa_A Calcium/calmodulin-depe 100.0 3.1E-39 1.1E-43 348.0 21.9 242 341-605 16-268 (444)
95 1ob3_A PFPK5, cell division co 100.0 3.4E-40 1.2E-44 336.0 13.6 252 342-605 8-281 (288)
96 2ivs_A Proto-oncogene tyrosine 100.0 4.4E-40 1.5E-44 339.1 14.5 250 341-611 28-311 (314)
97 1qpc_A LCK kinase; alpha beta 100.0 1.3E-39 4.6E-44 329.8 17.8 246 341-611 18-269 (279)
98 2pmi_A Negative RE, cyclin-dep 100.0 5.7E-40 2E-44 339.2 15.0 262 341-610 10-301 (317)
99 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-39 7.9E-44 339.1 19.7 241 342-605 59-306 (349)
100 3uzp_A CKI-delta, CKID, casein 100.0 9.8E-39 3.4E-43 326.1 23.8 254 341-614 14-283 (296)
101 2pvf_A Fibroblast growth facto 100.0 2.1E-39 7.3E-44 337.4 19.2 252 341-612 40-319 (334)
102 1b6c_B TGF-B superfamily recep 100.0 1.5E-39 5.1E-44 339.4 17.7 254 341-612 47-337 (342)
103 3v8s_A RHO-associated protein 100.0 4.7E-40 1.6E-44 350.6 14.1 241 341-605 74-330 (410)
104 2v62_A Serine/threonine-protei 100.0 9.8E-40 3.4E-44 341.5 16.4 255 341-612 42-329 (345)
105 3g33_A Cell division protein k 100.0 1.8E-39 6.3E-44 333.8 18.0 255 341-605 14-297 (308)
106 2ac3_A MAP kinase-interacting 100.0 9.9E-40 3.4E-44 336.9 16.1 249 342-605 19-296 (316)
107 1mp8_A Focal adhesion kinase 1 100.0 1.4E-39 4.9E-44 330.1 16.7 244 341-610 20-275 (281)
108 4fl3_A Tyrosine-protein kinase 100.0 1.2E-39 4.1E-44 366.5 17.8 241 342-609 375-629 (635)
109 2i0e_A Protein kinase C-beta I 100.0 3.4E-39 1.1E-43 337.8 19.8 239 341-605 25-277 (353)
110 3c1x_A Hepatocyte growth facto 100.0 8.3E-40 2.9E-44 345.3 15.2 247 341-612 94-356 (373)
111 3gni_B Strad alpha; kinase fol 100.0 5E-39 1.7E-43 341.8 21.4 261 341-610 30-341 (389)
112 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.1E-39 1E-43 338.0 19.3 236 342-604 47-293 (350)
113 4e5w_A Tyrosine-protein kinase 100.0 1.6E-39 5.5E-44 333.0 16.8 252 341-610 26-301 (302)
114 3lxp_A Non-receptor tyrosine-p 100.0 7.7E-40 2.6E-44 338.3 14.2 252 341-612 36-311 (318)
115 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.7E-39 1.3E-43 339.9 19.6 244 342-612 71-340 (365)
116 1kob_A Twitchin; kinase, intra 100.0 3.1E-39 1.1E-43 342.2 18.9 243 341-605 56-305 (387)
117 3og7_A AKAP9-BRAF fusion prote 100.0 4E-39 1.4E-43 328.2 19.1 248 341-611 29-288 (289)
118 3a62_A Ribosomal protein S6 ki 100.0 4.6E-39 1.6E-43 333.9 19.8 237 341-604 22-276 (327)
119 3o0g_A Cell division protein k 100.0 4.7E-39 1.6E-43 328.2 19.5 253 342-605 8-283 (292)
120 1u59_A Tyrosine-protein kinase 100.0 3.9E-39 1.3E-43 328.0 18.6 245 342-612 16-273 (287)
121 4hgt_A Casein kinase I isoform 100.0 1E-38 3.4E-43 325.9 21.7 254 341-614 14-283 (296)
122 2acx_A G protein-coupled recep 100.0 3.8E-39 1.3E-43 354.6 19.7 243 342-605 190-445 (576)
123 1mqb_A Ephrin type-A receptor 100.0 5.7E-39 1.9E-43 334.0 19.7 246 342-612 50-310 (333)
124 3oz6_A Mitogen-activated prote 100.0 9.5E-40 3.2E-44 347.3 13.9 190 341-540 14-235 (388)
125 4eut_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 342.4 19.7 264 341-612 14-310 (396)
126 3dbq_A Dual specificity protei 100.0 1.1E-38 3.8E-43 333.3 21.7 240 341-605 14-274 (343)
127 2zmd_A Dual specificity protei 100.0 1.1E-38 3.9E-43 338.8 22.0 240 341-605 61-321 (390)
128 2a19_B Interferon-induced, dou 100.0 6.4E-39 2.2E-43 325.3 19.2 244 341-616 16-279 (284)
129 2wqm_A Serine/threonine-protei 100.0 5.4E-39 1.8E-43 330.6 18.7 255 341-614 37-300 (310)
130 3lxl_A Tyrosine-protein kinase 100.0 8.2E-40 2.8E-44 339.5 12.5 255 341-613 28-305 (327)
131 3pls_A Macrophage-stimulating 100.0 1E-38 3.5E-43 326.3 20.3 248 341-612 26-288 (298)
132 4aw2_A Serine/threonine-protei 100.0 2.6E-39 8.9E-44 347.4 16.5 244 341-605 79-339 (437)
133 3lzb_A Epidermal growth factor 100.0 3E-39 1E-43 335.2 16.2 246 341-612 20-279 (327)
134 3ll6_A Cyclin G-associated kin 100.0 1.3E-39 4.3E-44 338.8 12.9 250 341-616 33-313 (337)
135 3cok_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 325.5 16.8 238 341-604 16-262 (278)
136 2y94_A 5'-AMP-activated protei 100.0 1E-38 3.4E-43 346.4 20.2 237 341-604 21-266 (476)
137 4agu_A Cyclin-dependent kinase 100.0 2.8E-39 9.4E-44 332.9 15.0 255 342-605 9-285 (311)
138 2h34_A Serine/threonine-protei 100.0 2.4E-38 8.1E-43 325.8 21.8 250 341-614 39-299 (309)
139 2xir_A Vascular endothelial gr 100.0 4.6E-39 1.6E-43 331.7 16.5 252 341-611 32-310 (316)
140 4ejn_A RAC-alpha serine/threon 100.0 3.7E-39 1.3E-43 349.1 16.5 237 341-604 153-404 (446)
141 3lm5_A Serine/threonine-protei 100.0 9.1E-39 3.1E-43 331.7 18.7 244 342-605 35-288 (327)
142 3brb_A Proto-oncogene tyrosine 100.0 1.3E-38 4.5E-43 328.2 19.8 250 341-611 39-308 (313)
143 3is5_A Calcium-dependent prote 100.0 1.6E-38 5.3E-43 323.2 20.0 243 341-604 27-278 (285)
144 2qr7_A Ribosomal protein S6 ki 100.0 2.5E-39 8.5E-44 337.7 14.2 243 341-605 27-278 (342)
145 3ork_A Serine/threonine protei 100.0 4.1E-39 1.4E-43 331.8 15.6 249 341-612 17-282 (311)
146 2a2a_A Death-associated protei 100.0 1.9E-38 6.6E-43 328.3 20.6 242 341-605 17-273 (321)
147 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-38 5.4E-43 348.8 21.1 244 342-604 191-448 (543)
148 1fvr_A Tyrosine-protein kinase 100.0 8.3E-39 2.9E-43 331.9 17.9 252 341-612 30-301 (327)
149 1xbb_A Tyrosine-protein kinase 100.0 1.1E-38 3.6E-43 325.4 18.3 241 343-610 24-278 (291)
150 2vd5_A DMPK protein; serine/th 100.0 2.8E-39 9.4E-44 344.8 14.5 243 341-605 66-328 (412)
151 3byv_A Rhoptry kinase; malaria 100.0 2.1E-40 7.1E-45 351.0 5.7 237 341-604 78-359 (377)
152 2eue_A Carbon catabolite derep 100.0 1.4E-38 4.8E-43 321.6 18.7 235 342-604 19-262 (275)
153 3fdn_A Serine/threonine-protei 100.0 1.5E-38 5E-43 322.2 18.6 238 341-605 14-258 (279)
154 3kvw_A DYRK2, dual specificity 100.0 2.9E-39 1E-43 347.7 14.2 193 341-540 102-303 (429)
155 3f66_A Hepatocyte growth facto 100.0 7.9E-39 2.7E-43 327.4 16.6 247 341-612 30-292 (298)
156 3dls_A PAS domain-containing s 100.0 8.8E-39 3E-43 332.8 17.2 232 341-605 29-275 (335)
157 2jii_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 336.2 16.4 255 341-614 47-339 (352)
158 3hko_A Calcium/calmodulin-depe 100.0 8.6E-39 2.9E-43 334.2 17.1 252 341-610 31-338 (345)
159 3cc6_A Protein tyrosine kinase 100.0 4.1E-39 1.4E-43 326.6 14.0 245 341-611 17-273 (281)
160 2i1m_A Macrophage colony-stimu 100.0 2.7E-39 9.2E-44 336.3 12.8 252 341-611 51-326 (333)
161 2buj_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 330.6 16.0 253 341-613 34-308 (317)
162 1p4o_A Insulin-like growth fac 100.0 7.8E-39 2.7E-43 331.2 16.2 251 341-612 30-300 (322)
163 3kk8_A Calcium/calmodulin depe 100.0 3.1E-38 1.1E-42 320.5 20.3 241 342-605 12-262 (284)
164 3sv0_A Casein kinase I-like; t 100.0 3.6E-38 1.2E-42 342.6 22.1 249 342-609 13-276 (483)
165 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-38 7E-43 322.0 18.9 241 341-605 16-280 (289)
166 1byg_A CSK, protein (C-termina 100.0 4.7E-39 1.6E-43 325.7 14.1 245 341-611 26-273 (278)
167 3bhy_A Death-associated protei 100.0 2.9E-38 1E-42 320.5 19.9 250 341-613 10-276 (283)
168 3ttj_A Mitogen-activated prote 100.0 8.9E-39 3E-43 347.0 16.9 253 341-605 67-356 (464)
169 1wak_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 338.8 18.0 259 341-605 42-392 (397)
170 2r5t_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 338.6 14.4 238 341-605 43-290 (373)
171 1vzo_A Ribosomal protein S6 ki 100.0 7.2E-39 2.5E-43 336.2 15.3 244 341-606 59-323 (355)
172 3f3z_A Calcium/calmodulin-depe 100.0 2.7E-38 9.1E-43 319.9 18.9 240 341-604 14-261 (277)
173 3q60_A ROP5B; pseudokinase, tr 100.0 1.5E-39 5.3E-44 343.5 10.1 247 341-604 67-352 (371)
174 1t4h_A Serine/threonine-protei 100.0 8E-38 2.7E-42 318.7 21.8 239 342-605 32-283 (290)
175 3mtl_A Cell division protein k 100.0 3.1E-39 1E-43 334.8 11.5 259 342-612 8-291 (324)
176 3rp9_A Mitogen-activated prote 100.0 1.1E-38 3.8E-43 346.6 16.3 181 341-531 58-279 (458)
177 2yex_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 317.9 19.5 241 341-605 12-262 (276)
178 1z57_A Dual specificity protei 100.0 1.4E-38 4.7E-43 331.1 15.9 254 341-605 19-329 (339)
179 4aaa_A Cyclin-dependent kinase 100.0 3.6E-38 1.2E-42 327.7 18.9 256 341-605 30-307 (331)
180 2jam_A Calcium/calmodulin-depe 100.0 6.6E-38 2.3E-42 321.6 20.5 242 341-605 14-262 (304)
181 3i6u_A CDS1, serine/threonine- 100.0 3.5E-38 1.2E-42 338.4 19.2 242 341-605 140-400 (419)
182 2y7j_A Phosphorylase B kinase 100.0 6E-38 2E-42 330.5 20.4 242 342-605 100-360 (365)
183 3rgf_A Cyclin-dependent kinase 100.0 2.8E-38 9.7E-43 337.9 18.1 194 341-540 26-240 (405)
184 1cm8_A Phosphorylated MAP kina 100.0 1.2E-38 4E-43 336.1 14.8 255 342-612 31-317 (367)
185 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-38 5.8E-43 329.4 15.5 252 341-610 46-321 (326)
186 3mi9_A Cell division protein k 100.0 2.4E-38 8.1E-43 331.8 16.7 253 341-605 22-312 (351)
187 2clq_A Mitogen-activated prote 100.0 1.3E-38 4.5E-43 325.0 14.3 243 342-605 28-279 (295)
188 3nsz_A CK II alpha, casein kin 100.0 9.2E-38 3.1E-42 324.3 20.3 249 341-605 41-320 (330)
189 3eqc_A Dual specificity mitoge 100.0 3.2E-38 1.1E-42 332.0 17.0 190 342-539 39-233 (360)
190 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-37 3.9E-42 323.0 20.7 242 341-604 29-286 (326)
191 3pfq_A PKC-B, PKC-beta, protei 100.0 3.3E-38 1.1E-42 357.2 17.9 238 341-604 346-597 (674)
192 2vx3_A Dual specificity tyrosi 100.0 3.5E-38 1.2E-42 334.5 16.9 194 341-539 59-261 (382)
193 3a7i_A MST3 kinase, serine/thr 100.0 1.6E-37 5.4E-42 318.5 21.2 239 341-606 27-272 (303)
194 3mwu_A Calmodulin-domain prote 100.0 1.4E-37 5E-42 340.3 22.2 245 341-609 27-283 (486)
195 1q8y_A SR protein kinase; tran 100.0 1.1E-37 3.6E-42 329.4 20.3 259 341-605 24-334 (373)
196 2yfx_A Tyrosine-protein kinase 100.0 2.6E-38 8.9E-43 328.1 15.3 251 341-612 35-305 (327)
197 2vgo_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 316.5 19.6 245 341-612 19-272 (284)
198 1ua2_A CAK, cell division prot 100.0 1.9E-38 6.6E-43 331.9 13.9 250 341-605 15-292 (346)
199 2w5a_A Serine/threonine-protei 100.0 1.9E-38 6.7E-43 321.1 13.4 245 342-608 12-271 (279)
200 1u46_A ACK-1, activated CDC42 100.0 1.2E-38 4.1E-43 324.7 11.7 250 341-615 23-288 (291)
201 2h6d_A 5'-AMP-activated protei 100.0 1.6E-37 5.5E-42 313.9 20.0 238 341-605 16-262 (276)
202 2rku_A Serine/threonine-protei 100.0 2E-37 7E-42 316.3 20.7 238 341-605 20-266 (294)
203 2owb_A Serine/threonine-protei 100.0 6.8E-38 2.3E-42 326.2 17.4 237 342-605 47-292 (335)
204 3com_A Serine/threonine-protei 100.0 8.8E-38 3E-42 322.0 18.0 240 341-604 34-278 (314)
205 3nyv_A Calmodulin-domain prote 100.0 7.7E-38 2.6E-42 342.4 18.0 245 341-609 31-288 (484)
206 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.5E-39 2.9E-43 332.2 9.9 252 341-604 39-318 (329)
207 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.1E-38 2.4E-42 323.4 16.5 246 341-613 38-304 (319)
208 3lij_A Calcium/calmodulin depe 100.0 1.8E-37 6.3E-42 340.1 20.6 241 341-605 42-292 (494)
209 2r3i_A Cell division protein k 100.0 4.4E-38 1.5E-42 321.9 14.3 249 342-604 9-283 (299)
210 2pml_X PFPK7, Ser/Thr protein 100.0 1.1E-37 3.8E-42 326.1 17.6 250 341-604 36-322 (348)
211 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-37 5.5E-42 341.4 19.7 241 341-605 41-302 (504)
212 3e3p_A Protein kinase, putativ 100.0 2E-37 6.8E-42 325.8 19.3 263 341-611 28-323 (360)
213 2xrw_A Mitogen-activated prote 100.0 1.6E-37 5.5E-42 328.0 18.5 253 341-605 30-319 (371)
214 2vwi_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 325.7 10.4 253 341-605 20-288 (303)
215 2rio_A Serine/threonine-protei 100.0 9.5E-38 3.3E-42 336.5 16.8 244 342-604 21-295 (434)
216 2fst_X Mitogen-activated prote 100.0 1.6E-38 5.3E-43 334.9 10.4 251 341-605 34-312 (367)
217 3n9x_A Phosphotransferase; mal 100.0 5.6E-38 1.9E-42 338.2 14.4 187 341-537 31-253 (432)
218 3pg1_A Mitogen-activated prote 100.0 1.9E-37 6.5E-42 326.3 17.6 253 341-605 27-317 (362)
219 3fme_A Dual specificity mitoge 100.0 1.6E-37 5.5E-42 316.1 16.5 244 341-604 12-266 (290)
220 2j7t_A Serine/threonine-protei 100.0 2E-37 6.8E-42 317.5 17.3 241 341-604 24-275 (302)
221 3fhr_A MAP kinase-activated pr 100.0 8.1E-38 2.8E-42 325.7 14.6 243 342-604 35-287 (336)
222 2j0j_A Focal adhesion kinase 1 100.0 2.1E-37 7.2E-42 349.6 19.1 244 341-610 395-650 (656)
223 1phk_A Phosphorylase kinase; g 100.0 3E-37 1E-41 315.5 18.5 242 341-604 22-283 (298)
224 2eu9_A Dual specificity protei 100.0 1.4E-37 4.6E-42 325.9 15.7 253 341-604 24-333 (355)
225 3qyz_A Mitogen-activated prote 100.0 4.6E-38 1.6E-42 331.4 12.1 251 341-605 32-314 (364)
226 3an0_A Dual specificity mitoge 100.0 1.5E-37 5.1E-42 324.2 15.7 249 342-609 57-317 (340)
227 4e7w_A Glycogen synthase kinas 100.0 7.9E-38 2.7E-42 332.9 13.7 260 341-612 45-331 (394)
228 3eb0_A Putative uncharacterize 100.0 1.4E-37 4.6E-42 330.1 15.4 251 341-604 12-321 (383)
229 1blx_A Cyclin-dependent kinase 100.0 1.8E-37 6.1E-42 321.4 15.8 260 341-610 16-304 (326)
230 4exu_A Mitogen-activated prote 100.0 6.6E-37 2.3E-41 323.3 20.1 247 341-605 47-324 (371)
231 1zy4_A Serine/threonine-protei 100.0 4.3E-37 1.5E-41 314.6 18.1 241 341-605 11-284 (303)
232 1j1b_A Glycogen synthase kinas 100.0 1.9E-37 6.4E-42 332.8 15.6 258 341-610 59-344 (420)
233 3cek_A Dual specificity protei 100.0 1.8E-36 6E-41 312.3 22.0 239 342-605 34-293 (313)
234 2ycf_A Serine/threonine-protei 100.0 3E-37 1E-41 319.4 15.9 241 341-604 15-274 (322)
235 2wtk_C Serine/threonine-protei 100.0 1.4E-36 4.9E-41 311.6 20.7 243 342-610 11-271 (305)
236 3coi_A Mitogen-activated prote 100.0 2E-37 7E-42 325.0 14.7 253 342-609 30-312 (353)
237 3aln_A Dual specificity mitoge 100.0 3.9E-37 1.3E-41 319.3 15.1 249 341-604 27-285 (327)
238 2b9h_A MAP kinase FUS3, mitoge 100.0 1.8E-36 6.3E-41 317.5 19.8 257 341-611 16-314 (353)
239 2wei_A Calmodulin-domain prote 100.0 2.5E-36 8.7E-41 307.1 19.9 245 341-609 27-283 (287)
240 2i6l_A Mitogen-activated prote 100.0 2.8E-37 9.7E-42 318.7 13.0 248 341-605 16-306 (320)
241 3p23_A Serine/threonine-protei 100.0 7.2E-37 2.5E-41 328.9 16.1 238 342-604 30-283 (432)
242 2dyl_A Dual specificity mitoge 100.0 2.3E-36 7.8E-41 311.8 18.1 242 341-604 30-283 (318)
243 3a99_A Proto-oncogene serine/t 100.0 5.5E-37 1.9E-41 317.3 12.1 233 341-605 48-294 (320)
244 2iwi_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 313.1 12.1 233 341-605 36-284 (312)
245 3uqc_A Probable conserved tran 100.0 8.4E-36 2.9E-40 303.1 17.1 227 342-614 37-268 (286)
246 2pzi_A Probable serine/threoni 100.0 5.3E-36 1.8E-40 341.0 16.3 232 341-609 85-326 (681)
247 3m2w_A MAP kinase-activated pr 100.0 1.9E-35 6.4E-40 302.7 16.4 225 342-605 24-257 (299)
248 3qa8_A MGC80376 protein; kinas 100.0 5.5E-36 1.9E-40 332.6 11.3 262 341-613 19-311 (676)
249 3dzo_A Rhoptry kinase domain; 100.0 3.7E-35 1.2E-39 314.3 9.9 235 342-604 84-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 4.5E-35 1.5E-39 305.0 8.6 237 340-603 24-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.9E-29 6.6E-34 279.5 6.8 180 344-535 242-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 8.1E-27 2.8E-31 240.1 14.0 184 21-206 2-198 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 3.2E-26 1.1E-30 252.3 8.4 177 341-537 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 1.7E-24 5.7E-29 249.8 13.8 186 18-207 5-224 (768)
255 4ecn_A Leucine-rich repeat pro 99.9 1E-23 3.5E-28 242.9 10.1 181 22-208 266-575 (876)
256 4eco_A Uncharacterized protein 99.9 2.8E-23 9.5E-28 234.4 11.9 180 24-208 29-332 (636)
257 1zar_A RIO2 kinase; serine kin 99.9 2.6E-22 8.8E-27 202.8 9.2 138 342-509 96-252 (282)
258 3rgz_A Protein brassinosteroid 99.8 1.6E-21 5.6E-26 224.8 11.1 114 113-226 631-750 (768)
259 4fcg_A Uncharacterized protein 99.8 2.6E-21 9E-26 200.1 9.0 185 18-208 20-231 (328)
260 3m19_A Variable lymphocyte rec 99.8 3.4E-19 1.2E-23 177.0 15.8 152 66-218 36-194 (251)
261 3e6j_A Variable lymphocyte rec 99.8 3.9E-19 1.3E-23 174.0 14.3 153 44-199 11-176 (229)
262 2o6s_A Variable lymphocyte rec 99.8 1.1E-18 3.7E-23 168.0 14.5 149 49-199 4-165 (208)
263 2v70_A SLIT-2, SLIT homolog 2 99.8 4.8E-19 1.6E-23 172.2 11.7 150 49-199 8-170 (220)
264 1ogq_A PGIP-2, polygalacturona 99.8 2.3E-19 7.9E-24 184.2 8.3 138 65-203 125-265 (313)
265 2v9t_B SLIT homolog 2 protein 99.8 1.6E-18 5.6E-23 168.4 12.4 144 49-195 8-165 (220)
266 1zth_A RIO1 serine protein kin 99.8 1.6E-18 5.4E-23 172.8 10.8 131 342-490 53-219 (258)
267 2xot_A Amphoterin-induced prot 99.7 4E-18 1.4E-22 178.6 9.7 170 47-218 13-204 (361)
268 2o6q_A Variable lymphocyte rec 99.7 2.4E-17 8.2E-22 165.4 14.7 137 67-204 39-179 (270)
269 1w8a_A SLIT protein; signaling 99.7 4.8E-18 1.7E-22 161.4 6.7 128 69-200 12-144 (192)
270 2v70_A SLIT-2, SLIT homolog 2 99.7 1.1E-16 3.8E-21 155.4 15.4 154 56-218 7-168 (220)
271 2v9t_B SLIT homolog 2 protein 99.7 9.2E-17 3.1E-21 156.0 14.5 154 56-218 7-167 (220)
272 3rfs_A Internalin B, repeat mo 99.7 1.6E-16 5.4E-21 159.6 16.2 151 65-218 63-220 (272)
273 2o6q_A Variable lymphocyte rec 99.7 2.3E-16 7.8E-21 158.2 15.8 153 65-218 61-220 (270)
274 3e6j_A Variable lymphocyte rec 99.7 2.1E-16 7.1E-21 154.5 14.9 155 55-218 14-174 (229)
275 1w8a_A SLIT protein; signaling 99.7 1.7E-16 5.9E-21 150.6 13.5 129 49-178 5-144 (192)
276 4fcg_A Uncharacterized protein 99.7 8E-17 2.7E-21 166.4 11.0 146 65-214 127-288 (328)
277 3m19_A Variable lymphocyte rec 99.7 3.4E-16 1.2E-20 155.2 13.9 132 65-197 59-194 (251)
278 1ozn_A Reticulon 4 receptor; N 99.7 3.2E-16 1.1E-20 158.4 13.4 141 66-207 57-202 (285)
279 2o6r_A Variable lymphocyte rec 99.7 4.3E-16 1.5E-20 145.7 12.6 133 50-199 5-141 (177)
280 2z66_A Variable lymphocyte rec 99.7 2.3E-16 7.8E-21 161.2 11.2 153 49-204 4-197 (306)
281 3v47_A TOLL-like receptor 5B a 99.7 2.2E-16 7.6E-21 170.6 11.4 152 54-206 9-178 (455)
282 3rfs_A Internalin B, repeat mo 99.7 6.8E-16 2.3E-20 155.0 14.2 134 65-199 85-222 (272)
283 3oja_B Anopheles plasmodium-re 99.7 2.8E-16 9.7E-21 175.8 12.5 169 44-213 11-202 (597)
284 1p9a_G Platelet glycoprotein I 99.7 1.1E-15 3.8E-20 154.9 15.4 136 66-205 32-171 (290)
285 2z81_A CD282 antigen, TOLL-lik 99.6 1.5E-16 5.1E-21 176.3 9.3 154 51-207 3-173 (549)
286 2z80_A TOLL-like receptor 2, v 99.6 2E-16 6.9E-21 165.1 9.7 158 44-206 22-198 (353)
287 3o6n_A APL1; leucine-rich repe 99.6 3.5E-16 1.2E-20 165.6 11.2 169 44-213 5-196 (390)
288 4b8c_D Glucose-repressible alc 99.6 1.2E-16 4.1E-21 182.2 8.1 178 22-204 129-338 (727)
289 2z66_A Variable lymphocyte rec 99.6 3.3E-16 1.1E-20 160.0 10.5 137 66-204 79-221 (306)
290 4g8a_A TOLL-like receptor 4; l 99.6 2.4E-16 8.4E-21 177.3 9.8 150 56-206 34-197 (635)
291 2o6s_A Variable lymphocyte rec 99.6 3.9E-15 1.3E-19 143.0 16.8 154 57-219 4-164 (208)
292 2id5_A Lingo-1, leucine rich r 99.6 7.2E-16 2.5E-20 167.7 12.9 158 49-207 6-177 (477)
293 1ozn_A Reticulon 4 receptor; N 99.6 1.4E-15 4.8E-20 153.7 13.8 143 65-208 32-179 (285)
294 3zyi_A Leucine-rich repeat-con 99.6 1.3E-15 4.4E-20 164.6 14.3 146 49-195 49-209 (452)
295 2xwt_C Thyrotropin receptor; s 99.6 6.2E-16 2.1E-20 152.1 9.5 153 45-201 3-174 (239)
296 2ft3_A Biglycan; proteoglycan, 99.6 2.4E-15 8.4E-20 155.5 14.3 160 50-214 31-204 (332)
297 2ell_A Acidic leucine-rich nuc 99.6 4.7E-16 1.6E-20 144.1 7.9 132 65-200 24-164 (168)
298 1p9a_G Platelet glycoprotein I 99.6 2.8E-15 9.7E-20 151.9 13.7 147 66-217 56-209 (290)
299 2wfh_A SLIT homolog 2 protein 99.6 3.4E-15 1.2E-19 141.7 13.4 124 69-197 14-141 (193)
300 2z62_A TOLL-like receptor 4, v 99.6 1.4E-15 4.8E-20 152.9 11.2 139 66-205 29-172 (276)
301 1xku_A Decorin; proteoglycan, 99.6 2.6E-15 9E-20 155.1 13.5 147 50-200 29-188 (330)
302 3vq2_A TLR4, TOLL-like recepto 99.6 9.4E-16 3.2E-20 172.0 10.9 152 67-219 401-561 (606)
303 3v47_A TOLL-like receptor 5B a 99.6 1.5E-15 5.2E-20 164.0 12.0 133 66-199 276-412 (455)
304 3t6q_A CD180 antigen; protein- 99.6 1.3E-15 4.5E-20 170.8 11.7 163 45-208 3-179 (606)
305 3vq2_A TLR4, TOLL-like recepto 99.6 1.4E-15 4.9E-20 170.5 11.6 140 65-205 32-176 (606)
306 3j0a_A TOLL-like receptor 5; m 99.6 1.6E-15 5.5E-20 176.6 11.7 135 86-220 422-564 (844)
307 2z62_A TOLL-like receptor 4, v 99.6 3.3E-15 1.1E-19 150.2 12.4 112 65-177 52-166 (276)
308 3cvr_A Invasion plasmid antige 99.6 1.8E-15 6.3E-20 166.6 10.3 151 44-214 35-191 (571)
309 4gyi_A RIO2 kinase; protein ki 99.6 4.2E-15 1.4E-19 154.2 12.1 133 341-490 100-265 (397)
310 2je0_A Acidic leucine-rich nuc 99.6 1E-15 3.4E-20 138.8 5.9 124 65-191 17-149 (149)
311 3oja_A Leucine-rich immune mol 99.6 1.6E-15 5.6E-20 165.1 8.4 146 66-218 100-252 (487)
312 3zyj_A Leucine-rich repeat-con 99.6 9.4E-15 3.2E-19 157.2 13.6 153 65-219 112-295 (440)
313 4eco_A Uncharacterized protein 99.6 7.2E-16 2.5E-20 173.7 4.4 140 65-207 206-377 (636)
314 3j0a_A TOLL-like receptor 5; m 99.6 8.4E-15 2.9E-19 170.5 13.4 148 54-204 15-170 (844)
315 3zyi_A Leucine-rich repeat-con 99.6 1.4E-14 4.7E-19 156.5 13.9 153 65-219 123-306 (452)
316 1ziw_A TOLL-like receptor 3; i 99.6 9.2E-15 3.2E-19 166.2 12.6 148 54-202 5-165 (680)
317 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.2E-14 4.2E-19 161.4 13.3 151 64-218 352-512 (562)
318 2wfh_A SLIT homolog 2 protein 99.6 1.2E-14 3.9E-19 138.0 11.2 124 49-175 7-141 (193)
319 4glp_A Monocyte differentiatio 99.6 3.3E-15 1.1E-19 153.0 7.5 136 65-202 117-270 (310)
320 1wwl_A Monocyte differentiatio 99.6 2.2E-15 7.4E-20 154.5 6.0 127 67-195 65-214 (312)
321 4ezg_A Putative uncharacterize 99.5 8.2E-15 2.8E-19 139.5 9.5 133 66-206 45-181 (197)
322 4ecn_A Leucine-rich repeat pro 99.5 2.6E-15 8.8E-20 173.1 6.8 139 65-207 448-619 (876)
323 3t6q_A CD180 antigen; protein- 99.5 8.8E-15 3E-19 164.0 10.9 143 65-208 376-526 (606)
324 1xku_A Decorin; proteoglycan, 99.5 2.9E-14 1E-18 147.2 13.6 140 66-208 122-265 (330)
325 4g8a_A TOLL-like receptor 4; l 99.5 1.2E-14 3.9E-19 163.6 11.1 153 66-218 421-582 (635)
326 2z7x_B TOLL-like receptor 1, v 99.5 1E-14 3.6E-19 160.3 10.3 150 65-218 324-483 (520)
327 3zyj_A Leucine-rich repeat-con 99.5 3.8E-14 1.3E-18 152.4 13.8 145 50-195 39-198 (440)
328 2z81_A CD282 antigen, TOLL-lik 99.5 3.4E-14 1.2E-18 157.2 13.6 146 67-218 363-512 (549)
329 1wwl_A Monocyte differentiatio 99.5 3E-15 1E-19 153.4 4.4 133 66-199 96-245 (312)
330 4ezg_A Putative uncharacterize 99.5 1.2E-14 4.1E-19 138.4 8.1 128 65-196 66-195 (197)
331 1ziw_A TOLL-like receptor 3; i 99.5 3.7E-14 1.3E-18 161.2 13.6 151 69-220 458-626 (680)
332 2xot_A Amphoterin-induced prot 99.5 8.4E-14 2.9E-18 145.7 15.1 139 50-200 10-153 (361)
333 3oja_A Leucine-rich immune mol 99.5 9.2E-15 3.1E-19 159.2 8.1 128 66-196 35-183 (487)
334 2ft3_A Biglycan; proteoglycan, 99.5 3.6E-14 1.2E-18 146.7 12.0 145 66-214 124-275 (332)
335 3oja_B Anopheles plasmodium-re 99.5 3.6E-14 1.2E-18 158.7 12.6 109 66-175 76-186 (597)
336 2z63_A TOLL-like receptor 4, v 99.5 2.6E-14 8.8E-19 158.9 11.2 154 65-220 373-535 (570)
337 2id5_A Lingo-1, leucine rich r 99.5 2.8E-14 9.5E-19 155.1 11.1 143 65-208 56-202 (477)
338 2z63_A TOLL-like receptor 4, v 99.5 3.6E-14 1.2E-18 157.7 12.3 148 65-214 347-505 (570)
339 2je0_A Acidic leucine-rich nuc 99.5 1.1E-14 3.7E-19 132.0 6.4 119 88-208 15-142 (149)
340 2ell_A Acidic leucine-rich nuc 99.5 2.5E-14 8.7E-19 132.3 8.8 119 88-208 22-149 (168)
341 1xeu_A Internalin C; cellular 99.5 6.4E-14 2.2E-18 139.8 12.2 141 65-215 41-184 (263)
342 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 4.9E-14 1.7E-18 156.5 12.5 139 65-206 52-195 (562)
343 1dce_A Protein (RAB geranylger 99.5 4.7E-14 1.6E-18 156.0 11.1 117 67-189 443-567 (567)
344 4glp_A Monocyte differentiatio 99.5 1.3E-14 4.6E-19 148.4 6.2 140 66-205 92-247 (310)
345 2xwt_C Thyrotropin receptor; s 99.5 3.6E-14 1.2E-18 139.3 8.9 138 65-205 55-203 (239)
346 4b8c_D Glucose-repressible alc 99.5 4.9E-15 1.7E-19 168.9 2.7 138 64-206 223-365 (727)
347 3o53_A Protein LRIM1, AGAP0063 99.5 1.6E-14 5.5E-19 148.3 6.3 144 67-217 101-251 (317)
348 2z7x_B TOLL-like receptor 1, v 99.5 2.9E-14 1E-18 156.7 8.8 139 65-206 21-164 (520)
349 3g39_A Variable lymphocyte rec 99.5 1.7E-13 5.9E-18 127.1 11.6 105 69-177 13-119 (170)
350 3o6n_A APL1; leucine-rich repe 99.5 1.6E-13 5.5E-18 145.1 12.9 108 66-175 70-180 (390)
351 2o6r_A Variable lymphocyte rec 99.5 1.5E-13 5.1E-18 128.3 9.9 113 65-178 28-142 (177)
352 3o53_A Protein LRIM1, AGAP0063 99.5 4.8E-14 1.7E-18 144.7 6.8 133 65-207 80-215 (317)
353 2r9u_A Variable lymphocyte rec 99.5 3.7E-13 1.3E-17 125.3 12.1 106 68-177 15-122 (174)
354 3g39_A Variable lymphocyte rec 99.5 2.6E-13 8.9E-18 125.8 11.1 105 92-199 11-119 (170)
355 1a9n_A U2A', U2A'; complex (nu 99.4 1.3E-13 4.4E-18 128.7 8.4 124 65-195 19-153 (176)
356 2r9u_A Variable lymphocyte rec 99.4 4.4E-13 1.5E-17 124.8 11.9 103 93-198 15-121 (174)
357 3cvr_A Invasion plasmid antige 99.4 7.1E-14 2.4E-18 154.0 7.4 133 65-215 100-242 (571)
358 1h6t_A Internalin B; cell adhe 99.4 3.5E-13 1.2E-17 136.5 11.9 131 65-206 68-200 (291)
359 4ay9_X Follicle-stimulating ho 99.4 3.2E-13 1.1E-17 140.6 10.4 147 50-199 7-194 (350)
360 2z80_A TOLL-like receptor 2, v 99.4 2.2E-13 7.5E-18 142.0 8.7 133 65-200 76-215 (353)
361 1h6u_A Internalin H; cell adhe 99.4 5.4E-13 1.9E-17 136.3 11.3 127 65-198 63-189 (308)
362 1h6t_A Internalin B; cell adhe 99.4 5.9E-13 2E-17 134.8 11.4 130 66-207 47-179 (291)
363 1h6u_A Internalin H; cell adhe 99.4 6.8E-13 2.3E-17 135.5 11.9 122 66-196 42-165 (308)
364 1ds9_A Outer arm dynein; leuci 99.4 1.1E-15 3.9E-20 145.7 -8.8 130 66-200 19-158 (198)
365 1jl5_A Outer protein YOPM; leu 99.4 1.2E-13 4.1E-18 149.0 5.6 101 65-173 11-124 (454)
366 1m9s_A Internalin B; cell inva 99.4 8.7E-13 3E-17 146.8 12.0 132 65-207 65-198 (605)
367 1dce_A Protein (RAB geranylger 99.4 5.8E-13 2E-17 147.3 9.9 104 91-199 442-550 (567)
368 3bz5_A Internalin-J, INLJ; leu 99.4 1.3E-12 4.5E-17 140.9 11.7 123 66-199 149-281 (457)
369 2ifg_A High affinity nerve gro 99.4 1.4E-12 4.8E-17 135.5 10.7 108 51-174 7-117 (347)
370 1o6v_A Internalin A; bacterial 99.4 1.1E-12 3.8E-17 142.1 10.0 134 65-207 243-376 (466)
371 1o6v_A Internalin A; bacterial 99.4 1.5E-12 5.2E-17 141.0 11.0 134 65-207 221-354 (466)
372 3g06_A SSPH2 (leucine-rich rep 99.3 6.7E-13 2.3E-17 148.0 7.6 140 44-203 14-161 (622)
373 1m9s_A Internalin B; cell inva 99.3 1.7E-12 5.9E-17 144.4 10.8 131 65-207 43-176 (605)
374 1xeu_A Internalin C; cellular 99.3 2E-12 6.7E-17 128.9 10.1 123 65-197 63-187 (263)
375 1a9n_A U2A', U2A'; complex (nu 99.3 1.1E-12 3.9E-17 122.2 7.8 119 85-208 14-142 (176)
376 4fmz_A Internalin; leucine ric 99.3 1.5E-12 5E-17 135.2 8.1 141 65-214 199-344 (347)
377 4fmz_A Internalin; leucine ric 99.3 2.7E-12 9.3E-17 133.2 9.8 144 65-215 177-323 (347)
378 1jl5_A Outer protein YOPM; leu 99.3 9.6E-12 3.3E-16 134.0 13.8 117 65-195 131-250 (454)
379 3bz5_A Internalin-J, INLJ; leu 99.3 9.8E-12 3.4E-16 134.1 13.9 123 65-199 106-228 (457)
380 2ifg_A High affinity nerve gro 99.3 6.5E-12 2.2E-16 130.4 10.0 102 94-197 12-118 (347)
381 2ast_B S-phase kinase-associat 99.2 3.6E-13 1.2E-17 139.1 -2.1 125 66-192 71-205 (336)
382 2ca6_A RAN GTPase-activating p 99.2 6.5E-13 2.2E-17 140.2 -1.9 143 65-207 60-245 (386)
383 2ca6_A RAN GTPase-activating p 99.2 1.1E-12 3.9E-17 138.3 -0.8 150 65-215 122-315 (386)
384 2ast_B S-phase kinase-associat 99.2 5.6E-13 1.9E-17 137.7 -3.4 138 66-204 94-245 (336)
385 3tm0_A Aminoglycoside 3'-phosp 99.2 9.5E-11 3.2E-15 116.5 12.6 134 343-487 21-211 (263)
386 3g06_A SSPH2 (leucine-rich rep 99.2 8.2E-11 2.8E-15 131.1 13.2 125 66-206 62-204 (622)
387 3goz_A Leucine-rich repeat-con 99.2 4.8E-12 1.6E-16 132.3 2.0 133 67-199 24-184 (362)
388 3goz_A Leucine-rich repeat-con 99.1 6.1E-12 2.1E-16 131.5 1.7 126 70-196 3-152 (362)
389 4ay9_X Follicle-stimulating ho 99.1 1.2E-10 4.2E-15 121.0 9.9 129 58-195 7-142 (350)
390 1ds9_A Outer arm dynein; leuci 99.1 8.4E-13 2.9E-17 125.6 -6.7 118 86-207 14-141 (198)
391 1nd4_A Aminoglycoside 3'-phosp 99.1 2.8E-10 9.4E-15 112.7 11.3 129 345-488 29-213 (264)
392 3rw6_A Nuclear RNA export fact 99.0 3.3E-12 1.1E-16 126.2 -9.4 145 51-199 77-237 (267)
393 3dxp_A Putative acyl-COA dehyd 98.9 2.4E-09 8.1E-14 111.6 11.3 140 342-489 44-248 (359)
394 1z7x_W Ribonuclease inhibitor; 98.9 2.3E-11 8E-16 131.2 -5.6 150 65-214 227-409 (461)
395 1z7x_W Ribonuclease inhibitor; 98.9 5.2E-11 1.8E-15 128.5 -3.3 134 65-198 3-158 (461)
396 3un9_A NLR family member X1; l 98.8 1.3E-10 4.3E-15 121.7 -3.7 132 65-196 101-253 (372)
397 3sg8_A APH(2'')-ID; antibiotic 98.8 3.1E-09 1.1E-13 108.0 4.6 180 343-536 27-287 (304)
398 3un9_A NLR family member X1; l 98.6 5.1E-10 1.7E-14 117.1 -7.1 131 66-196 73-225 (372)
399 3sb4_A Hypothetical leucine ri 98.6 1.2E-07 4.1E-12 97.3 10.0 36 66-103 102-137 (329)
400 3sb4_A Hypothetical leucine ri 98.5 8.4E-08 2.9E-12 98.5 7.1 47 80-127 83-137 (329)
401 1io0_A Tropomodulin; LRR prote 98.5 7.4E-09 2.5E-13 97.0 -1.7 111 85-195 31-164 (185)
402 3ogk_B Coronatine-insensitive 98.5 5.4E-09 1.9E-13 116.4 -3.2 131 66-197 379-528 (592)
403 3rw6_A Nuclear RNA export fact 98.5 8.2E-09 2.8E-13 101.8 -2.0 101 86-188 137-257 (267)
404 3r70_A Aminoglycoside phosphot 98.4 7.6E-07 2.6E-11 90.9 10.0 132 342-489 43-237 (320)
405 4gkh_A Aminoglycoside 3'-phosp 98.2 6.7E-06 2.3E-10 81.5 12.4 133 345-488 33-222 (272)
406 3ogk_B Coronatine-insensitive 98.2 1.9E-07 6.6E-12 103.8 1.1 135 66-203 139-290 (592)
407 3d1u_A Putative fructosamine-3 98.2 7.3E-06 2.5E-10 82.2 12.0 139 342-487 21-214 (288)
408 3tdw_A Gentamicin resistance p 98.2 7.5E-06 2.6E-10 82.9 12.2 134 343-488 26-223 (306)
409 2p1m_B Transport inhibitor res 98.1 1.3E-07 4.5E-12 105.1 -3.7 106 88-195 370-494 (594)
410 3ats_A Putative uncharacterize 98.1 8E-06 2.7E-10 84.6 9.7 78 343-420 27-121 (357)
411 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.6E-05 5.6E-10 82.4 11.1 142 343-489 48-243 (362)
412 1io0_A Tropomodulin; LRR prote 98.0 4.5E-07 1.5E-11 84.7 -1.6 108 65-173 36-164 (185)
413 2p1m_B Transport inhibitor res 98.0 4.9E-07 1.7E-11 100.4 -2.2 104 87-192 102-221 (594)
414 2q83_A YTAA protein; 2635576, 98.0 3.9E-05 1.3E-09 78.6 12.0 141 343-487 39-250 (346)
415 2ra8_A Uncharacterized protein 98.0 2.1E-06 7.1E-11 89.0 2.2 40 85-127 167-206 (362)
416 3jr1_A Putative fructosamine-3 97.8 0.00015 5.1E-09 73.3 12.0 139 343-485 43-232 (312)
417 2olc_A MTR kinase, methylthior 97.7 0.00021 7.2E-09 75.0 13.4 74 342-417 36-120 (397)
418 4fdw_A Leucine rich hypothetic 97.7 0.00011 3.9E-09 77.1 10.7 121 66-192 204-333 (401)
419 4fdw_A Leucine rich hypothetic 97.6 0.00018 6.3E-09 75.5 10.5 96 66-167 158-255 (401)
420 3rfe_A Platelet glycoprotein I 97.5 0.00011 3.9E-09 63.9 6.2 56 118-173 12-68 (130)
421 2pyw_A Uncharacterized protein 97.5 0.00057 1.9E-08 72.3 12.5 75 458-533 231-313 (420)
422 3f7w_A Putative fructosamine-3 97.5 0.00077 2.6E-08 67.2 12.5 73 342-418 21-96 (288)
423 1zyl_A Hypothetical protein YI 97.4 0.0013 4.4E-08 66.8 13.3 142 344-488 34-222 (328)
424 2ra8_A Uncharacterized protein 97.4 0.00013 4.3E-09 75.5 5.6 133 65-199 107-269 (362)
425 1pgv_A TMD-1, tropomodulin TMD 97.2 3.4E-05 1.2E-09 71.9 -1.3 111 85-195 36-170 (197)
426 2ppq_A HSK, HK, homoserine kin 97.2 0.0026 8.9E-08 64.3 12.5 144 343-488 29-216 (322)
427 3feg_A Choline/ethanolamine ki 97.1 0.0013 4.4E-08 68.3 9.8 142 343-488 57-253 (379)
428 3e4g_A ATP synthase subunit S, 97.1 9.2E-05 3.1E-09 67.7 0.4 82 90-171 61-150 (176)
429 3dxq_A Choline/ethanolamine ki 97.0 0.0017 5.9E-08 65.1 9.1 139 342-488 24-201 (301)
430 3csv_A Aminoglycoside phosphot 97.0 0.002 6.9E-08 65.6 9.1 142 344-489 26-217 (333)
431 2qg7_A Ethanolamine kinase PV0 96.9 0.0051 1.8E-07 65.5 11.9 74 342-419 114-188 (458)
432 3c5i_A Choline kinase; choline 96.8 0.0028 9.7E-08 65.5 9.0 72 343-418 40-120 (369)
433 1nw1_A Choline kinase (49.2 KD 96.7 0.01 3.4E-07 62.8 12.2 71 343-418 80-158 (429)
434 3rfe_A Platelet glycoprotein I 96.4 0.0049 1.7E-07 53.4 6.5 56 69-127 12-68 (130)
435 3i1a_A Spectinomycin phosphotr 96.4 0.01 3.4E-07 60.6 10.0 69 345-419 32-108 (339)
436 1pgv_A TMD-1, tropomodulin TMD 96.3 0.00058 2E-08 63.6 -0.4 109 64-173 40-170 (197)
437 2yle_A Protein spire homolog 1 96.0 0.054 1.9E-06 50.7 11.6 103 417-535 33-135 (229)
438 4gt6_A Cell surface protein; l 95.9 0.017 5.8E-07 60.2 8.8 109 81-194 256-369 (394)
439 4h09_A Hypothetical leucine ri 95.9 0.024 8.2E-07 58.6 9.8 102 85-190 212-318 (379)
440 3e4g_A ATP synthase subunit S, 95.6 0.003 1E-07 57.6 1.1 82 114-195 61-153 (176)
441 4gt6_A Cell surface protein; l 95.5 0.038 1.3E-06 57.5 9.2 82 107-191 258-343 (394)
442 3f2s_A CK, chetk-alpha, cholin 95.3 0.069 2.4E-06 55.5 10.5 141 343-487 59-278 (401)
443 3mes_A Choline kinase; malaria 95.3 0.041 1.4E-06 57.8 8.8 73 343-419 77-157 (424)
444 4fs7_A Uncharacterized protein 94.9 0.092 3.1E-06 54.5 10.1 95 67-168 232-328 (394)
445 2k1k_A Ephrin type-A receptor 94.6 0.016 5.4E-07 37.8 2.0 32 254-285 6-37 (38)
446 4h09_A Hypothetical leucine ri 94.5 0.095 3.2E-06 54.0 9.0 132 67-213 219-355 (379)
447 4fs7_A Uncharacterized protein 93.9 0.085 2.9E-06 54.8 7.0 118 66-192 254-376 (394)
448 2l2t_A Receptor tyrosine-prote 92.6 0.071 2.4E-06 35.7 2.5 31 259-289 10-40 (44)
449 2ks1_B Epidermal growth factor 92.5 0.1 3.4E-06 35.1 3.2 30 259-288 11-40 (44)
450 3g15_A CK, chetk-alpha, cholin 90.7 0.58 2E-05 48.6 8.5 28 461-488 246-279 (401)
451 4ann_A ESSB; membrane protein, 86.0 1.9 6.5E-05 40.1 7.6 123 381-537 36-158 (215)
452 2jwa_A Receptor tyrosine-prote 80.6 0.71 2.4E-05 30.9 1.6 26 261-287 14-39 (44)
453 4ano_A ESSB; membrane protein, 74.8 6 0.0002 36.9 6.8 115 390-537 48-163 (219)
454 2klu_A T-cell surface glycopro 66.3 6.8 0.00023 28.4 3.8 21 264-284 12-32 (70)
455 3cxl_A N-chimerin; SH2, RHO-GA 64.2 0.79 2.7E-05 48.6 -2.0 58 342-403 148-215 (463)
456 2l34_A TYRO protein tyrosine k 53.8 5.2 0.00018 24.9 1.3 25 256-280 4-28 (33)
457 3ls8_A Phosphatidylinositol 3- 46.4 1.2E+02 0.004 32.8 11.3 85 396-488 403-501 (614)
458 1iij_A ERBB-2 receptor protein 35.4 6.2 0.00021 24.9 -0.5 7 280-286 28-34 (35)
459 2lz0_A Uncharacterized protein 30.4 68 0.0023 25.4 4.9 45 80-125 10-54 (100)
460 1afo_A Glycophorin A; integral 21.7 54 0.0018 21.0 2.0 26 260-285 11-36 (40)
461 2llm_A Amyloid beta A4 protein 25.5 22 0.00075 23.4 0.0 18 257-274 15-32 (43)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.1e-53 Score=436.91 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=204.0
Q ss_pred HhHhCccceeEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE------EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||+||+|.+. +++.||||+++.... ..++|.+|++++.++ +|||||+++|+|.+.+..++|||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEE
Confidence 357999999999999862 468899999976532 357899999999999 99999999999999999999999
Q ss_pred cccCCCHhhhhccCCCC-----------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEE
Q 006747 413 FIEAGSFSALLHGNRGI-----------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCI 481 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki 481 (632)
||++|+|.++|+..... ....++|..+++|+.|+|.||+|||+. +||||||||+||||++++++||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEE
Confidence 99999999999754211 124689999999999999999999998 9999999999999999999999
Q ss_pred cccCCCCCCCCC------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHH
Q 006747 482 SDFGLTPLMNTP------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSV 554 (632)
Q Consensus 482 ~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 554 (632)
+|||+|+..... ....+|+.|||||++.++.|+.++|||||||+||||+| |+.||.+... ...+. .
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------~~~~~-~ 259 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVVE-M 259 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------HHHHH-H
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------HHHHH-H
Confidence 999999865322 23458889999999999999999999999999999999 8999975432 11122 2
Q ss_pred hhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhC
Q 006747 555 VREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610 (632)
Q Consensus 555 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 610 (632)
+..+.... ...+....+.+|+.+||+.||++||||+||+++|+.+.
T Consensus 260 i~~~~~~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 260 IRNRQVLP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHcCCCCC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 22221111 11123345778899999999999999999999999764
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.6e-53 Score=439.71 Aligned_cols=251 Identities=23% Similarity=0.380 Sum_probs=200.9
Q ss_pred HhHhCccceeEEEEEEEc------CCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE------EGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||+||+|++. +++.||||+++.... ..++|.+|++++.++ +|||||+++|+|.+.+..+|||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEc
Confidence 467999999999999864 478999999976532 356799999999999 999999999999999999999999
Q ss_pred ccCCCHhhhhccCCCC----------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcc
Q 006747 414 IEAGSFSALLHGNRGI----------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISD 483 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~D 483 (632)
|++|+|.++++..... ...+++|..++.|+.|+|.||+|||+. +||||||||+||||++++++||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEcc
Confidence 9999999999865321 234699999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCC------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhh
Q 006747 484 FGLTPLMNTP------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556 (632)
Q Consensus 484 fGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 556 (632)
||+|+..... ....+|+.|||||++.+..|+.++|||||||+||||+| |+.||.+... ...+.. +.
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~-i~ 274 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------TEAIDC-IT 274 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH------HHHHHH-HH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH------HHHHHH-HH
Confidence 9999876432 23458889999999999999999999999999999999 8999975331 111222 22
Q ss_pred hccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 557 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.+... ..+. ....++.+|+.+||+.||++||||+||+++|+.+.+.
T Consensus 275 ~g~~~-------~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 275 QGREL-------ERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HTCCC-------CCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cCCCC-------CCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 22111 0111 1234577889999999999999999999999998654
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-53 Score=435.08 Aligned_cols=250 Identities=22% Similarity=0.418 Sum_probs=202.7
Q ss_pred HhHhCccceeEEEEEEEc------CCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE------EGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||+||+|.+. ++..||||+++.... ..++|.+|++++.++ +|||||+++|+|.+.+..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEc
Confidence 467999999999999863 478899999976532 356799999999999 999999999999999999999999
Q ss_pred ccCCCHhhhhccCC--------CCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccC
Q 006747 414 IEAGSFSALLHGNR--------GIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG 485 (632)
Q Consensus 414 ~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfG 485 (632)
|++|+|.++|+..+ ......++|..++.|+.|+|.||+|||+. +||||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCcc
Confidence 99999999997542 12345699999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhc
Q 006747 486 LTPLMNTP------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREE 558 (632)
Q Consensus 486 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (632)
+|+..... ....+|+.|||||++.+..|+.++|||||||+||||+| |+.||.+... ...... +..+
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~-i~~~ 246 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIEC-ITQG 246 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHH-HHHT
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHH-HHcC
Confidence 99765432 12247889999999999999999999999999999999 8999975431 111222 2222
Q ss_pred cccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 559 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.... .+. ....++.+|+.+||+.||++||||+||++.|+++..
T Consensus 247 ~~~~-------~p~---~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 247 RVLQ-------RPR---TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp CCCC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC-------CCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1110 111 123457788999999999999999999999998854
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-52 Score=427.47 Aligned_cols=248 Identities=29% Similarity=0.437 Sum_probs=197.4
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||+||+|.+. ..||||+++..... .+.|.+|++++.++ +|||||+++|+|. .+..+||||||++|
T Consensus 41 ~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 467999999999999875 36999999755333 45799999999999 9999999999885 46789999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.++++... .+++|..++.|+.|+|.||+|||+. +||||||||+||||++++++||+|||+|+.....
T Consensus 117 sL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999997543 3599999999999999999999998 9999999999999999999999999999876432
Q ss_pred --CCCCCCCcccCCccccC---CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIET---KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~---~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
....||+.|||||++.+ +.|+.++|||||||+||||+||+.||.+... ...+...+..+.. .+.+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~------~~~~~~~~~~~~~----~p~~ 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN------RDQIIFMVGRGYA----SPDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHTTCC----CCCS
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh------HHHHHHHHhcCCC----CCCc
Confidence 23468999999999964 4589999999999999999999999975332 1122222222211 1111
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.. ...+....+.+|+.+||+.||++||||.||++.|+.+..
T Consensus 260 ~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 260 SK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp TT--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred cc--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 10 111223457788899999999999999999999998854
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.8e-53 Score=433.67 Aligned_cols=261 Identities=22% Similarity=0.313 Sum_probs=198.8
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCC----ceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD----EKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lv~E~~~~ 416 (632)
.+.||+|+||+||+|++ +|+.||||+++........++.|+..+.++ +|||||+++|+|.+.+ ..+||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 36799999999999998 589999999976533233344455555677 8999999999998754 57999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc-----CCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV-----GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
|+|.++++.. +++|..+.+++.|+|.||+|||+.+ .++||||||||+|||||+++++||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999754 4899999999999999999999763 4689999999999999999999999999997654
Q ss_pred CCC--------CCCCCCcccCCccccCC------CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCC--------ChhH
Q 006747 492 TPT--------VPSRSAGYRAPEVIETK------KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV--------DLPR 549 (632)
Q Consensus 492 ~~~--------~~~~t~~y~aPE~~~~~------~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~--------~~~~ 549 (632)
... ...||+.|||||++.+. .++.++|||||||+||||+||+.||......... ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 321 23589999999999764 3678999999999999999998887543221110 0111
Q ss_pred HHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 550 WVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 550 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
.+.....++ ..++.+.......+....+.+|+.+||+.||++||||.||++.|+++.+..
T Consensus 240 ~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 EMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 222222111 122222221122345667889999999999999999999999999986553
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.5e-51 Score=425.67 Aligned_cols=253 Identities=26% Similarity=0.364 Sum_probs=204.4
Q ss_pred HhHhCccceeEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeC-CceEEEE
Q 006747 341 AEVLGKGSYGTTYKAILEE------GTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSK-DEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lv~ 411 (632)
.+.||+|+||+||+|.... ++.||||+++.... ..+.|.+|++++.++.+|||||+++|+|.+. +..++||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 4689999999999998542 35899999976532 2467999999999996669999999999765 5689999
Q ss_pred ecccCCCHhhhhccCCC-----------CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeE
Q 006747 412 DFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC 480 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~k 480 (632)
|||++|+|.++|+..+. .....++|..++.++.|+|+||+|||+. +||||||||+|||+++++++|
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCEE
Confidence 99999999999975432 1234589999999999999999999998 999999999999999999999
Q ss_pred EcccCCCCCCCCCC------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 006747 481 ISDFGLTPLMNTPT------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQS 553 (632)
Q Consensus 481 i~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 553 (632)
|+|||+|+...... ...+|+.|||||++.+..|+.++|||||||+||||+| |+.||.+.... ..+..
T Consensus 226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~------~~~~~ 299 (353)
T 4ase_A 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCR 299 (353)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHH
T ss_pred ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH------HHHHH
Confidence 99999998765432 2246888999999999999999999999999999998 99999764321 12222
Q ss_pred HhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 554 VVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 554 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.+.++.... .+. ....++.+++.+||+.||++||||.||+++|+.+.+.
T Consensus 300 ~i~~g~~~~-------~p~---~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 300 RLKEGTRMR-------APD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHTCCCC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCC-------CCc---cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 333322111 111 1234577888999999999999999999999988554
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.2e-51 Score=420.67 Aligned_cols=239 Identities=22% Similarity=0.364 Sum_probs=198.0
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
+.||+|+||+||+|... +|+.||||+++... ...+.+.+|++++.++ +|||||+++++|.+.+..||||||+++|+|
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 56999999999999964 68999999997553 3356689999999999 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----CC
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TV 495 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~ 495 (632)
.+++... .+++.....++.|++.||+|||+. +||||||||+|||+++++.+||+|||+|+..... ..
T Consensus 159 ~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 159 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 9999753 388999999999999999999998 9999999999999999999999999999876432 34
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcH
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 575 (632)
..||+.|||||++.+..|+.++|||||||++|||++|+.||.+... ...... +.+.... .+....
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~-i~~~~~~-----~~~~~~--- 294 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKM-IRDNLPP-----RLKNLH--- 294 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHH-HHHSSCC-----CCSCGG---
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHH-HHcCCCC-----CCCccc---
Confidence 5699999999999999999999999999999999999999975321 111111 1221111 111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 576 ~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
....++.+|+.+||+.||++|||++|++++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 122356778889999999999999999874
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.3e-51 Score=418.33 Aligned_cols=240 Identities=21% Similarity=0.266 Sum_probs=196.1
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
+.||+|+||.||+|+. .+|+.||||+++.... ..+|++++.++ +|||||++++++.+.+..||||||+++|+|.
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 138 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-SSPRIVPLYGAVREGPWVNIFMELLEGGSLG 138 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcHH
Confidence 5799999999999996 4589999999976432 24689999999 9999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC-CeEEcccCCCCCCCCC------
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL-QGCISDFGLTPLMNTP------ 493 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~-~~ki~DfGla~~~~~~------ 493 (632)
++++... ++++.....++.|++.||+|||+. +||||||||+||||+.++ .+||+|||+|+.....
T Consensus 139 ~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~ 210 (336)
T 4g3f_A 139 QLIKQMG-----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 210 (336)
T ss_dssp HHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---------
T ss_pred HHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce
Confidence 9997643 489999999999999999999998 999999999999999998 6999999999876432
Q ss_pred ---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 494 ---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
....||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+. .. .+..+..... . .
T Consensus 211 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~---~i~~~~~~~~----~--~ 278 (336)
T 4g3f_A 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---CL---KIASEPPPIR----E--I 278 (336)
T ss_dssp ---CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---HH---HHHHSCCGGG----G--S
T ss_pred ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HH---HHHcCCCCch----h--c
Confidence 123589999999999999999999999999999999999999976543322 11 1111111000 0 0
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhh
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 609 (632)
.... ...+.+++.+||+.||++|||+.|++++|...
T Consensus 279 ~~~~---s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 279 PPSC---APLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CccC---CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 1112 23466788899999999999999999887654
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.7e-50 Score=404.81 Aligned_cols=241 Identities=23% Similarity=0.375 Sum_probs=191.6
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEe----CCceEEEEec
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFS----KDEKLLVYDF 413 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~E~ 413 (632)
+.||+|+||+||+|... ++..||+|++...... .+.|.+|++++.++ +|||||+++++|.+ .+..|+||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 46999999999999864 5889999999765433 35689999999999 99999999999875 2457999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC-CCCeEEcccCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ-DLQGCISDFGLTPLMNT 492 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~-~~~~ki~DfGla~~~~~ 492 (632)
|++|+|.++++... ++++.....++.|++.||+|||++ +++||||||||+||||++ ++.+||+|||+|+....
T Consensus 111 ~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 111 MTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999997642 588999999999999999999987 224999999999999985 79999999999986544
Q ss_pred C--CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 493 P--TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 493 ~--~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
. ....||+.|||||++.+ .|+.++|||||||++|||+||+.||.+... ... +...+..+.....++
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----~~~-~~~~i~~~~~~~~~~----- 252 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQ-IYRRVTSGVKPASFD----- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHH-HHHHHTTTCCCGGGG-----
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----HHH-HHHHHHcCCCCCCCC-----
Confidence 3 23469999999998865 699999999999999999999999964321 111 112222221111111
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
... ..++.+|+.+||+.||++|||++|++++
T Consensus 253 -~~~---~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 -KVA---IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -GCC---CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -ccC---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 1246778889999999999999999863
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.8e-50 Score=417.34 Aligned_cols=240 Identities=21% Similarity=0.396 Sum_probs=193.9
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|++++.++ +|||||++++++.+.+..||||||+++
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 36799999999999985 46899999999765433 45689999999999 899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC--
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-- 494 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-- 494 (632)
|+|.+++...+ ...+++.....|+.|++.||+|||+. +||||||||+||||++++.+||+|||+|+......
T Consensus 108 g~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 108 GDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 99999997543 23578888999999999999999998 99999999999999999999999999999876431
Q ss_pred --CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 495 --VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 495 --~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
...||+.|||||++.+..|+.++|||||||++|||+||+.||.+.. .......+....... ...
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~~~~--------~~~ 247 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIISGSFPP--------VSL 247 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCCC--------CCT
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCCCC--------CCc
Confidence 2359999999999999999999999999999999999999997532 222233333222110 011
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.. ..++.+|+.+||+.||++|||++|+++
T Consensus 248 ~~---s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 248 HY---SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 234677888999999999999999986
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=420.92 Aligned_cols=239 Identities=22% Similarity=0.370 Sum_probs=197.9
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++.++ +|||||+++++|.+.+..|||||||++|+|
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEeCCCCCcH
Confidence 57999999999999964 58999999997553 3356689999999999 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----CC
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TV 495 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~ 495 (632)
.+++... .+++.....|+.|++.||+|||+. +||||||||+||||+.++.+||+|||+|+..... ..
T Consensus 236 ~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 236 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred HHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 9999754 388999999999999999999998 9999999999999999999999999999876432 23
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcH
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 575 (632)
..||+.|||||++.+..|+.++|||||||++|||++|+.||.+... ...... +.+... +.+.......
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~-i~~~~~-----~~~~~~~~~s 374 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKM-IRDNLP-----PRLKNLHKVS 374 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHH-HHHSCC-----CCCSCTTSSC
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHH-HHcCCC-----CCCcccccCC
Confidence 4689999999999999999999999999999999999999975321 111111 222111 1111111222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 576 ~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.++.+|+.+||+.||++|||+.|++++
T Consensus 375 ---~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 375 ---PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp ---HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 346678889999999999999999874
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.3e-49 Score=402.38 Aligned_cols=237 Identities=18% Similarity=0.296 Sum_probs=197.3
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccc----ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEV----VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||+||+|+. .+|+.||||++.+. ....+.+.+|++++.++ +|||||++++++.+.+..|+||||++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 46899999999999995 46899999999754 23356799999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|.+++...+ .+++.....++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 116 gG~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 116 NGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999997643 488899999999999999999998 9999999999999999999999999999876432
Q ss_pred ----CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 494 ----TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 494 ----~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
...+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. .......+...... .
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~~~-------~- 253 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKIIKLEYD-------F- 253 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC-------C-
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCC-------C-
Confidence 23469999999999999999999999999999999999999997532 12222222222110 0
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
..... .++.+|+.+||+.||++|||++|++.
T Consensus 254 -p~~~s---~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 254 -PEKFF---PKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp -CTTCC---HHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred -CcccC---HHHHHHHHHHccCCHhHCcChHHHcC
Confidence 11122 34667888999999999999998743
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-48 Score=390.56 Aligned_cols=236 Identities=23% Similarity=0.375 Sum_probs=184.3
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc----CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM----GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||+||+|.. .+|+.||||++++... ..+.+.+|++++.++ +|||||++++++.+.+..|+||||+
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 36799999999999985 4689999999975432 245789999999999 8999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|.+++.... ++++.....++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 96 ~g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 96 GNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 679999987542 488999999999999999999998 9999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 -TVPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....||+.|||||++.+..| +.++||||+||++|||+||+.||.+.. .....+........ + .
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~~~~~-------~--p 232 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT-------L--P 232 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC-------C--C
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC-------C--C
Confidence 33469999999999998876 579999999999999999999997532 22222222221110 0 1
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.... .++.+++.+||+.||++|||++|+++
T Consensus 233 ~~~s---~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 KFLS---PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TTSC---HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCC---HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1122 34667888999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.5e-49 Score=398.16 Aligned_cols=237 Identities=23% Similarity=0.348 Sum_probs=187.9
Q ss_pred HhHhCccceeEEEEEEEc----CCcEEEEEEecccc---cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE----EGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||+||+|+.. .++.||||++++.. .....+.+|++++.++ +|||||++++++.+.+..|+||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEc
Confidence 468999999999999852 46899999997542 1234688899999999 999999999999999999999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC-
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT- 492 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~- 492 (632)
+++|+|.+++.... ++++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp CTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999997643 488999999999999999999998 999999999999999999999999999986532
Q ss_pred ---CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 493 ---PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 493 ---~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
.....||+.|||||++.+..|+.++||||+||++|||+||+.||.+... ......+......
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~~~~~~--------- 244 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR------KETMTMILKAKLG--------- 244 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH------HHHHHHHHcCCCC---------
Confidence 2344699999999999999999999999999999999999999975321 1222222221110
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTM-----EEVVR 604 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~-----~evl~ 604 (632)
.+.... .++.+|+.+||+.||++|||+ +|+++
T Consensus 245 ~p~~~s---~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 MPQFLS---PEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCTTSC---HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCCcCC---HHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 111122 346678889999999999994 56654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8e-48 Score=392.43 Aligned_cols=239 Identities=18% Similarity=0.329 Sum_probs=182.4
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCc-----------
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDE----------- 406 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 406 (632)
.+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|++++.++ +|||||+++++|.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccccCCCc
Confidence 36799999999999985 4689999999975432 245789999999999 89999999999976543
Q ss_pred -eEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccC
Q 006747 407 -KLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFG 485 (632)
Q Consensus 407 -~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfG 485 (632)
.|+||||+++|+|.+++..... ....++.....|+.|++.||+|||+. +||||||||+|||++.++.+||+|||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCc
Confidence 6899999999999999986532 23456777889999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCC----------------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhH
Q 006747 486 LTPLMNTPT----------------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPR 549 (632)
Q Consensus 486 la~~~~~~~----------------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~ 549 (632)
+|+...... ...||+.|||||++.+..|+.++|||||||++|||++ ||.... +...
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~ 235 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVR 235 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHH
Confidence 998764321 2358999999999999999999999999999999996 774310 0011
Q ss_pred HHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 550 WVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 550 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.... ...... .....+......+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~-~~~~~~----------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TLTD-VRNLKF----------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHH-HHTTCC----------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH-HhcCCC----------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 111110 0111222344567899999999999999999987
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-44 Score=380.73 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=193.0
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeC------CceEEE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSK------DEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 410 (632)
.+.||+|+||+||+|.. .+|+.||||+++..... .+.+.+|+++|.++ +|||||++++++... +..|+|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCEEEEE
Confidence 36799999999999996 46899999999765433 35688999999999 899999999997643 578999
Q ss_pred EecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCC
Q 006747 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM 490 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 490 (632)
||||+ |+|.+++...+ ++++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+.+
T Consensus 138 mE~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 138 LDLME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EECCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EeCCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99996 68999997543 589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCC--------CCCCCCCcccCCccccCCC-CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---c
Q 006747 491 NTP--------TVPSRSAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE---E 558 (632)
Q Consensus 491 ~~~--------~~~~~t~~y~aPE~~~~~~-~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 558 (632)
... ....||+.|||||++.+.. ++.++||||+||++|||++|+.||.+....+. ...+...... .
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~---l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ---LQLIMMVLGTPSPA 285 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH---HHHHHHHHCCCCGG
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH---HHHHHHhcCCCChH
Confidence 321 2346899999999988754 69999999999999999999999976432111 1111110000 0
Q ss_pred ccccccc-------ccccc--cCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhh
Q 006747 559 WTSEVFD-------VELMR--YENIE----EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDI 609 (632)
Q Consensus 559 ~~~~~~d-------~~~~~--~~~~~----~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i 609 (632)
....+-. ..+.. ..... ....++.+|+.+||+.||++|||+.|++++ +++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence 0000000 00000 00000 012356788999999999999999999874 5544
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.5e-44 Score=376.50 Aligned_cols=187 Identities=22% Similarity=0.413 Sum_probs=163.3
Q ss_pred HhHhCccceeEEEEEEEc----CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||+||+|..+ .++.||+|++.... ....+.+|++++.++.+|||||++++++.+.+..|+||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 357999999999999853 46789999987543 4566889999999987899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCC-CCeEEcccCCCCCCCCC--
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD-LQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~-~~~ki~DfGla~~~~~~-- 493 (632)
|+|.+++. .+++.....++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 99999984 277888999999999999999998 99999999999999877 79999999999754321
Q ss_pred ------------------------------CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCC
Q 006747 494 ------------------------------TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAP 539 (632)
Q Consensus 494 ------------------------------~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~ 539 (632)
....||++|||||++.+. .|+.++||||+||++|||+||+.||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 123589999999999876 4899999999999999999999999653
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.8e-43 Score=366.00 Aligned_cols=264 Identities=29% Similarity=0.532 Sum_probs=222.9
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
+.||+|+||.||+|...+++.||||++..... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|.
T Consensus 45 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred ceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 57999999999999988899999999876533 356789999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC------C
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP------T 494 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~------~ 494 (632)
+++..... ....++|..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++..... .
T Consensus 124 ~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 199 (321)
T 2qkw_B 124 RHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199 (321)
T ss_dssp GGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBC
T ss_pred HHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 99976532 334689999999999999999999998 9999999999999999999999999999764322 1
Q ss_pred CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 495 VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
...+|..|+|||.+.+..++.++|||||||++|||+||+.||......+......|.......+.....+++.... ...
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 278 (321)
T 2qkw_B 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KIR 278 (321)
T ss_dssp CCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT-CSC
T ss_pred ccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc-ccC
Confidence 2236888999999998899999999999999999999999998766666666666665555454444555544322 234
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.+....+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 5677789999999999999999999999999998754
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.3e-44 Score=369.72 Aligned_cols=269 Identities=36% Similarity=0.661 Sum_probs=222.6
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||+|...+++.||||++..... ....+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 35 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 113 (326)
T 3uim_A 35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPYMANGS 113 (326)
T ss_dssp TTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEECCSSCCEEEEECCTTCB
T ss_pred ceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEEecCCceEEEEEeccCCC
Confidence 467999999999999988899999999976532 234689999999999 89999999999999999999999999999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC----
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT---- 494 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---- 494 (632)
|.+++..... ...+++|..+..++.+++.||+|||+.+.++|+||||||+|||+++++.+||+|||+++......
T Consensus 114 L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 192 (326)
T 3uim_A 114 VASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 192 (326)
T ss_dssp HHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEE
T ss_pred HHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccccc
Confidence 9999986542 34569999999999999999999999877799999999999999999999999999997654322
Q ss_pred -CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCC--CCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 495 -VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP--GHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 495 -~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
...+|+.|+|||.+.+..++.++|||||||++|||+||+.||... ..........|+.............+.... .
T Consensus 193 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 271 (326)
T 3uim_A 193 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-G 271 (326)
T ss_dssp CCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCT-T
T ss_pred ccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhc-c
Confidence 234889999999998888999999999999999999999999632 122333455666555555544555554432 2
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
....++...+.+++.+||+.||++|||+.||+++|++....
T Consensus 272 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 272 NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 34567778899999999999999999999999999975443
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.7e-44 Score=393.02 Aligned_cols=240 Identities=18% Similarity=0.294 Sum_probs=190.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHH---HHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQ---MEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e---~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.++||+|+||+||+|+.. +|+.||||++++.. .....+..| ++++..+ +|||||+++++|.+.+..|+|||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEEEEEEe
Confidence 467999999999999964 58999999997542 223334444 4445555 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 492 (632)
|++||+|.+++.... .+++.....++.|++.||+|||+. +||||||||+||||+.+|++||+|||+|+....
T Consensus 273 y~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 273 LMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999997643 488899999999999999999998 999999999999999999999999999987654
Q ss_pred C--CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 493 P--TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 493 ~--~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
. ...+||+.|||||++.+ ..|+.++||||+||++|||++|+.||.+....+. ............ .
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~~---------~ 412 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMAV---------E 412 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCCC---------C
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCCC---------C
Confidence 3 34579999999999975 5799999999999999999999999975432221 111111111110 0
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPT-----MEEVVR 604 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~evl~ 604 (632)
.+.... .++.+|+.+||+.||++|++ ++||.+
T Consensus 413 ~p~~~S---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 413 LPDSFS---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCTTSC---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCccCC---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 111122 34667888999999999998 677765
No 21
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.7e-43 Score=364.95 Aligned_cols=258 Identities=24% Similarity=0.338 Sum_probs=202.3
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCC----ceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD----EKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|... ++.||||++.........++.|+.++.++ +||||+++++++.... ..++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 367999999999999875 79999999976654455677788889999 8999999999998754 36999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc-------CCCceecCCCCCCeeecCCCCeEEcccCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV-------GGKFILGNIKSSNVLLSQDLQGCISDFGLTPL 489 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 489 (632)
|+|.++++.. +++|..+..++.|++.||+|||+.+ .++|+||||||+|||+++++.+||+|||+++.
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~ 180 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence 9999999754 3899999999999999999999862 34899999999999999999999999999966
Q ss_pred CCCC------CCCCCCCcccCCccccCC-----CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhH---------
Q 006747 490 MNTP------TVPSRSAGYRAPEVIETK-----KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPR--------- 549 (632)
Q Consensus 490 ~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~--------- 549 (632)
.... ....+|+.|+|||.+.+. .++.++|||||||++|||+||+.||.+...........
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 260 (322)
T 3soc_A 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLE 260 (322)
T ss_dssp ECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHH
T ss_pred cccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchh
Confidence 5432 223578899999999873 45678899999999999999999998754433222111
Q ss_pred -HHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 550 -WVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 550 -~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
+..... ... ..+.+............+.+++.+||+.||++|||+.||++.|+++..
T Consensus 261 ~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 261 DMQEVVV-HKK----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHT-TSC----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhh-ccc----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111111 111 111111111122345668899999999999999999999999998854
No 22
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.6e-43 Score=388.74 Aligned_cols=243 Identities=21% Similarity=0.400 Sum_probs=198.2
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|+++|.++ +|||||++++++.+.+..|+|||||++|+
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 46799999999999986 468999999997643 2356788999999999 99999999999999999999999999999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCC--CCeEEcccCCCCCCCCCC--
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD--LQGCISDFGLTPLMNTPT-- 494 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~--~~~ki~DfGla~~~~~~~-- 494 (632)
|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 241 L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 241 LFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp HHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred HHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 999986542 2488999999999999999999998 99999999999999854 899999999998876543
Q ss_pred -CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 495 -VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 495 -~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
...||+.|||||++.+..|+.++||||+||++|||++|+.||.+... ......+...... +... ....
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~------~~~~~~i~~~~~~---~~~~--~~~~ 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNVKSCDWN---MDDS--AFSG 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCCC---CCSG--GGTT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHhCCCC---CCcc--cccC
Confidence 23689999999999999999999999999999999999999975431 1112222211111 0000 1111
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.. .++.+|+.+||+.||++|||+.|++++
T Consensus 383 ~s---~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 IS---EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SC---HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 22 346678889999999999999999874
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-42 Score=357.67 Aligned_cols=252 Identities=29% Similarity=0.422 Sum_probs=195.6
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|.. ++..||||++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 46799999999999987 5889999999765433 34688999999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK--FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|.+++.... ....+++..+..++.|++.||+|||+. + |+||||||+|||+++++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 194 (309)
T 3p86_A 120 SLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL 194 (309)
T ss_dssp BHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----------
T ss_pred cHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc
Confidence 9999998642 123488999999999999999999998 7 999999999999999999999999999765433
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....+|+.|+|||.+.+..++.++|||||||++|||+||+.||..... ..............
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~------~~~~~~~~~~~~~~---------- 258 (309)
T 3p86_A 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP------AQVVAAVGFKCKRL---------- 258 (309)
T ss_dssp -------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHHSCCCC----------
T ss_pred ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCCCC----------
Confidence 234588899999999999999999999999999999999999965321 11111111011000
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCCC
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSE 615 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~ 615 (632)
.........+.+++.+||+.||++|||+.++++.|+.+.....+
T Consensus 259 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 259 EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 00111223577888899999999999999999999999776543
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.7e-42 Score=361.80 Aligned_cols=251 Identities=24% Similarity=0.393 Sum_probs=202.1
Q ss_pred HhHhCccceeEEEEEEEc--------CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEE
Q 006747 341 AEVLGKGSYGTTYKAILE--------EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~--------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 410 (632)
.+.||+|+||.||+|... ++..||||+++.... ..+.+.+|++++.++.+||||++++++|...+..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 467999999999999852 356799999976532 2357899999999997899999999999999999999
Q ss_pred EecccCCCHhhhhccCCC-----------CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCe
Q 006747 411 YDFIEAGSFSALLHGNRG-----------IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG 479 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ 479 (632)
|||+++|+|.+++...+. .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCCCE
Confidence 999999999999986532 1224589999999999999999999998 99999999999999999999
Q ss_pred EEcccCCCCCCCCCC------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006747 480 CISDFGLTPLMNTPT------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552 (632)
Q Consensus 480 ki~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 552 (632)
||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.+....+ +.
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~~---- 315 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LF---- 315 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH----
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----
Confidence 999999997654321 2235678999999999999999999999999999999 999997543211 11
Q ss_pred HHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 553 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
..+....... ........+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 316 ~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 316 KLLKEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHHHTTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111111110 011122457788899999999999999999999998753
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.3e-42 Score=351.31 Aligned_cols=249 Identities=24% Similarity=0.406 Sum_probs=201.8
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 367999999999999964 58999999986542 2356799999999999 89999999999999999999999999999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC----
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT---- 494 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~---- 494 (632)
|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 94 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 94 LRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999998642 3589999999999999999999998 99999999999999999999999999997654321
Q ss_pred --------------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 495 --------------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 495 --------------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
...+|+.|+|||.+.+..++.++|||||||++|||++|..|+........... ............
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 245 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-LNVRGFLDRYCP 245 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-BCHHHHHHHTCC
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-hhhhccccccCC
Confidence 23578899999999999999999999999999999999999865432221100 000111111000
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
......+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 246 --------------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 246 --------------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp --------------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 01112467888999999999999999999999988644
No 26
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8.8e-42 Score=349.59 Aligned_cols=250 Identities=24% Similarity=0.408 Sum_probs=193.5
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHh--hcCCCCccceeEEEEeC----CceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGR--LSQHPNVVPIRAYYFSK----DEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~--l~~h~niv~l~~~~~~~----~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|.. +++.||||++... ....+..|.+++.. + +||||+++++++... ...++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVML-RHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCC-CCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhc-cCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 36799999999999988 6899999999754 34556667776665 5 899999999997653 3578999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHH--------hccCCCceecCCCCCCeeecCCCCeEEcccCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH--------AAVGGKFILGNIKSSNVLLSQDLQGCISDFGL 486 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 486 (632)
++|+|.++++.. .+++..+.+++.|++.||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 89 ~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 89 EMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp TTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred cCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999643 4899999999999999999999 65 999999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCCCcccCCccccCC------CCCccchhhHHHHHHHHHHhC----------CCCCCCCCCC
Q 006747 487 TPLMNTP--------TVPSRSAGYRAPEVIETK------KPTQKSDVYSFGVLLLEMLTG----------KAPIQAPGHE 542 (632)
Q Consensus 487 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~DV~s~Gvvl~elltg----------~~p~~~~~~~ 542 (632)
++..... ....+|+.|+|||.+.+. .++.++|||||||++|||+|| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 9654332 223688999999999877 345789999999999999999 7887654322
Q ss_pred CCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhh
Q 006747 543 DVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609 (632)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 609 (632)
+. .... .......... .+..............+.+++.+||+.||++|||+.||++.|+++
T Consensus 240 ~~-~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DP-SFED-MRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SC-CHHH-HHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Cc-chhh-hhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 21 1111 1111111111 111111111234556788999999999999999999999999986
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-41 Score=348.84 Aligned_cols=239 Identities=22% Similarity=0.366 Sum_probs=196.7
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||+++|+|
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 5799999999999984 568999999997553 3467789999999999 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----CC
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TV 495 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~ 495 (632)
.+++... .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 105 ~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (297)
T 3fxz_A 105 TDVVTET------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (297)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred HHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence 9999754 378899999999999999999998 9999999999999999999999999998765432 23
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcH
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 575 (632)
..+|+.|+|||.+.+..++.++|||||||++|||+||+.||..... ............. .. ....
T Consensus 176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~-~~--------~~~~ 240 (297)
T 3fxz_A 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGTP-EL--------QNPE 240 (297)
T ss_dssp CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCSC-CC--------SCGG
T ss_pred ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC-CC--------CCcc
Confidence 4588899999999999999999999999999999999999965321 1111111111111 00 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 576 ~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.....+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 122456788899999999999999999873
No 28
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-41 Score=341.59 Aligned_cols=247 Identities=25% Similarity=0.444 Sum_probs=206.1
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||+|...++..||+|++.......+++.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 367999999999999998899999999988777788899999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-----CC
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-----TV 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-----~~ 495 (632)
+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9997543 3588999999999999999999998 9999999999999999999999999999866432 23
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ....... ...... .. ...
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~------~~~~~~~-~~~~~~--~~-----~~~- 231 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDI-STGFRL--YK-----PRL- 231 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHH-HTTCCC--CC-----CTT-
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHH-hcCccC--CC-----CCc-
Confidence 345677999999998999999999999999999999 9999965321 1111111 111100 00 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
....+.+++.+||+.||++|||+.+++++|+++.+.
T Consensus 232 --~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 232 --ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 123577888899999999999999999999998654
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.4e-41 Score=348.11 Aligned_cols=239 Identities=22% Similarity=0.331 Sum_probs=196.4
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 36999999999999976 69999999997553 3456789999999999 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----CC
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TV 495 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~ 495 (632)
.+++... .+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 130 ~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 130 TDIVSQV------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 9998643 489999999999999999999998 9999999999999999999999999998765432 23
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcH
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 575 (632)
..+|+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...... +....... ... ..
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~~~-~~~~~~~~-----~~~---~~ 265 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKR-LRDSPPPK-----LKN---SH 265 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHH-HHHSSCCC-----CTT---GG
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH-HhcCCCCC-----cCc---cc
Confidence 4588999999999999999999999999999999999999965321 111111 11111110 000 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 576 ~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.....+.+++.+||+.||++|||+.|++++
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 112346778889999999999999999874
No 30
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.1e-40 Score=342.70 Aligned_cols=271 Identities=30% Similarity=0.533 Sum_probs=214.5
Q ss_pred cCCCHHHHHHHHH-----------hHhCccceeEEEEEEEcCCcEEEEEEecccc-----cCHHHHHHHHHHHHhhcCCC
Q 006747 329 YNFDLEDLLRASA-----------EVLGKGSYGTTYKAILEEGTTVVVKRLKEVV-----MGKREFEQQMEVVGRLSQHP 392 (632)
Q Consensus 329 ~~~~~~~l~~~~~-----------~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~ 392 (632)
..|+++++..++. +.||+|+||.||+|.. +++.||||++.... ...+.+.+|++++.++ +||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 90 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHE 90 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCC
Confidence 3466777766652 5799999999999987 58899999987532 1246789999999999 899
Q ss_pred CccceeEEEEeCCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCee
Q 006747 393 NVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVL 472 (632)
Q Consensus 393 niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NIL 472 (632)
||+++++++...+..++||||+++|+|.+++.... ...+++|..+..++.+++.||+|||+. +|+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 99999999999999999999999999999987543 234689999999999999999999998 9999999999999
Q ss_pred ecCCCCeEEcccCCCCCCCCC------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 006747 473 LSQDLQGCISDFGLTPLMNTP------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD 546 (632)
Q Consensus 473 l~~~~~~ki~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~ 546 (632)
+++++.+||+|||+++..... ....++..|+|||.+.+ .++.++||||||+++|||++|+.||........
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-- 242 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 242 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--
Confidence 999999999999998765432 22357889999998865 478999999999999999999999976543222
Q ss_pred hhHHHHHHhhhc-cccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 547 LPRWVQSVVREE-WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 547 ~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
+..+........ ...+.++..+ ..........+.+++.+||+.||++|||+.+++++|+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 243 LLDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp TTHHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 122222221111 1111222222 12334566778899999999999999999999999999865
No 31
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.1e-41 Score=339.75 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=205.0
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||+|...++..||+|+++......+++.+|++++.++ +||||+++++++......++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 357999999999999998888999999988777788899999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-----C
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----V 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-----~ 495 (632)
+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9997542 3588999999999999999999998 99999999999999999999999999997664432 2
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
..++..|+|||.+.+..++.++||||||+++|||+| |+.||..... ........ .... ... ...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~-~~~~--~~~-----~~~- 229 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN------SEVVLKVS-QGHR--LYR-----PHL- 229 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHH-TTCC--CCC-----CTT-
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh------HHHHHHHH-cCCC--CCC-----CCc-
Confidence 235667999999998889999999999999999999 9999964321 11111111 1110 000 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
....+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 230 --~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 230 --ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp --SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred --ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 123577888999999999999999999999999765
No 32
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.5e-41 Score=366.75 Aligned_cols=247 Identities=27% Similarity=0.463 Sum_probs=204.6
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||+|...++..||||+++......+.|.+|++++.++ +|||||++++++. .+..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 367999999999999998899999999987766788999999999999 8999999999986 66789999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-----CC
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-----TV 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-----~~ 495 (632)
++++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..... ..
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 9997542 12478889999999999999999998 9999999999999999999999999999876432 22
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
..++..|+|||.+.+..++.++|||||||++|||+| |+.||.+... ...... +..+... ...
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~------~~~~~~-i~~~~~~----------~~~ 407 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PEVIRA-LERGYRM----------PRP 407 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHH-HHHTCCC----------CCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHH-HHcCCCC----------CCC
Confidence 335678999999998999999999999999999999 9999975321 111111 1111110 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
......+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 11234577888999999999999999999999998654
No 33
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=356.27 Aligned_cols=261 Identities=23% Similarity=0.345 Sum_probs=205.8
Q ss_pred HhHhCccceeEEEEEEEc--------CCcEEEEEEecccccC--HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEE
Q 006747 341 AEVLGKGSYGTTYKAILE--------EGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 410 (632)
.+.||+|+||.||+|... ++..||||+++..... .+.+.+|++++.++.+||||+++++++...+..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 367999999999999852 2357999999765322 366889999999998899999999999999999999
Q ss_pred EecccCCCHhhhhccCCCC-----------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCe
Q 006747 411 YDFIEAGSFSALLHGNRGI-----------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG 479 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ 479 (632)
|||+++|+|.+++...... ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCCCcE
Confidence 9999999999999765321 124589999999999999999999998 99999999999999999999
Q ss_pred EEcccCCCCCCCCCC------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006747 480 CISDFGLTPLMNTPT------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552 (632)
Q Consensus 480 ki~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 552 (632)
||+|||+++...... ...+|..|+|||.+.+..++.++|||||||++|||+| |+.||..... ....
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~------~~~~- 303 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------EELF- 303 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHH-
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHH-
Confidence 999999998765422 2235678999999999999999999999999999999 9999965321 1111
Q ss_pred HHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCCCCCCCCc
Q 006747 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQPSSE 621 (632)
Q Consensus 553 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~~~~~~~ 621 (632)
..+....... .... ...++.+++.+||+.||++|||++|+++.|+.+...........+
T Consensus 304 ~~~~~~~~~~-------~~~~---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 362 (382)
T 3tt0_A 304 KLLKEGHRMD-------KPSN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362 (382)
T ss_dssp HHHHTTCCCC-------CCSS---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred HHHHcCCCCC-------CCcc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 1122211110 0111 223577888899999999999999999999998665444443333
No 34
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=351.06 Aligned_cols=248 Identities=23% Similarity=0.401 Sum_probs=200.0
Q ss_pred HhHhCccceeEEEEEEEc----CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|... .+..||||+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeCC
Confidence 367999999999999974 355699999986432 246799999999999 8999999999999989999999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT 494 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 494 (632)
++|+|.++++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 133 ENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999997542 3589999999999999999999998 99999999999999999999999999998765432
Q ss_pred -------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 495 -------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 495 -------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
...+|..|+|||.+.+..++.++|||||||++|||++ |+.||..... ....... ......
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------~~~~~~~-~~~~~~----- 273 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------RDVISSV-EEGYRL----- 273 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH------HHHHHHH-HTTCCC-----
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHH-HcCCCC-----
Confidence 1234667999999998899999999999999999999 9999965321 1111111 111110
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
.........+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 274 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 274 -----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred -----CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 011112245778889999999999999999999999986653
No 35
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.4e-41 Score=370.61 Aligned_cols=248 Identities=25% Similarity=0.400 Sum_probs=206.3
Q ss_pred HhHhCccceeEEEEEEEcC-CcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 341 AEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
.+.||+|+||.||+|.... +..||||+++......+.|.+|++++.++ +|||||+++++|...+..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 4679999999999999765 88999999987766788899999999999 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-----
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT----- 494 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~----- 494 (632)
.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 99997642 34588999999999999999999998 99999999999999999999999999998765332
Q ss_pred CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 495 VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
...++..|+|||.+.+..++.++|||||||++|||+| |+.||.+....+ +. ..+...... ..
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~----~~~~~~~~~----------~~ 440 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VY----ELLEKDYRM----------ER 440 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH----HHHHTTCCC----------CC
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHcCCCC----------CC
Confidence 2234567999999998889999999999999999999 999997643211 11 111111110 11
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.......+.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 111224577888999999999999999999999998644
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9e-41 Score=346.49 Aligned_cols=238 Identities=19% Similarity=0.318 Sum_probs=196.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 36799999999999996 57899999999765433 34688999999999 899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 99 GEVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 99999997542 488899999999999999999998 9999999999999999999999999999765433
Q ss_pred CCCCCCCcccCCccccCCCCC-ccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 494 TVPSRSAGYRAPEVIETKKPT-QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~~-~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
....+|+.|+|||.+.+..++ .++|||||||++|||++|+.||.+.. .............. ...
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~---------~p~ 235 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLRGKYR---------IPF 235 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------CCT
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---------CCC
Confidence 334689999999999988875 78999999999999999999997532 12222222211110 001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
. ....+.+++.+||+.||++|||++|++++
T Consensus 236 ~---~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 236 Y---MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp T---SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C---CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 12346678889999999999999999874
No 37
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=8.3e-41 Score=362.13 Aligned_cols=246 Identities=26% Similarity=0.416 Sum_probs=201.4
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCC-ceEEEEecccCCCH
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD-EKLLVYDFIEAGSF 419 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lv~E~~~~g~L 419 (632)
.+.||+|+||.||+|... ++.||||+++... ..+.|.+|++++.++ +||||+++++++...+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 467999999999999885 7899999998654 457899999999999 8999999999988765 78999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-CCCCC
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-TVPSR 498 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-~~~~~ 498 (632)
.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..... ....+
T Consensus 275 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 348 (450)
T 1k9a_A 275 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348 (450)
T ss_dssp HHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC------CC
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCC
Confidence 99998642 23478899999999999999999998 9999999999999999999999999999765432 22346
Q ss_pred CCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHH
Q 006747 499 SAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577 (632)
Q Consensus 499 t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 577 (632)
+..|+|||.+.+..++.++|||||||++|||+| |+.||......+. .. .+..+... ......
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~---~~----~i~~~~~~----------~~p~~~ 411 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VP----RVEKGYKM----------DAPDGC 411 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH---HH----HHHTTCCC----------CCCTTC
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HH----HHHcCCCC----------CCCCcC
Confidence 778999999999999999999999999999999 9999976543221 11 11121111 011112
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 578 ~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
...+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 34577888999999999999999999999988543
No 38
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.2e-41 Score=363.96 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=200.5
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||+|...++..||||+++......+.|.+|++++.++ +||||+++++++.. +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 357999999999999998888999999987666778899999999999 89999999999866 6789999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-----C
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----V 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-----~ 495 (632)
+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...... .
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 9997532 13488999999999999999999998 99999999999999999999999999998765322 1
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
..++..|+|||.+.+..++.++|||||||++|||+| |+.||.+... ...... +..+... ...
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~------~~~~~~-i~~~~~~----------~~~ 403 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQ-VERGYRM----------PCP 403 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHH-HHTTCCC----------CCC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHH-HHcCCCC----------CCC
Confidence 235667999999999999999999999999999999 9999975321 111111 1111110 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
......+.+++.+||+.||++|||++++++.|+.+...
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 12234577888999999999999999999999998655
No 39
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-40 Score=338.14 Aligned_cols=246 Identities=21% Similarity=0.346 Sum_probs=202.2
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||++...++..||+|+++......+++.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 367999999999999998888999999998777788899999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-----CC
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-----TV 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-----~~ 495 (632)
+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++..... ..
T Consensus 108 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 108 NYLREMR----HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9997642 2488999999999999999999998 9999999999999999999999999999866432 22
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
..+|..|+|||.+.+..++.++||||||+++|||+| |+.||..... ...... +...... . ....
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~------~~~~~~-~~~~~~~--~-----~~~~- 245 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN------SETAEH-IAQGLRL--Y-----RPHL- 245 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHH-HHTTCCC--C-----CCTT-
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh------hHHHHH-HhcccCC--C-----CCCc-
Confidence 345678999999998899999999999999999999 9999965321 111111 1111100 0 0011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
....+.+++.+||+.||++|||+.+++++|+++.+
T Consensus 246 --~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 246 --ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp --CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 12357788899999999999999999999998754
No 40
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4e-41 Score=355.58 Aligned_cols=247 Identities=22% Similarity=0.441 Sum_probs=191.6
Q ss_pred HhHhCccceeEEEEEEEc----CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|... ++..||||+++.... ..+.+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEEEeCC
Confidence 367999999999999864 577899999975432 246799999999999 8999999999999999999999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT 494 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 494 (632)
++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 129 ENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999997542 3589999999999999999999998 99999999999999999999999999998765432
Q ss_pred C-------CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 495 V-------PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 495 ~-------~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
. ..++..|+|||.+.+..++.++|||||||++|||++ |+.||..... ..... .+......
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~------~~~~~-~i~~~~~~----- 269 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN------QDVIK-AVDEGYRL----- 269 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH------HHHHH-HHHTTEEC-----
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH------HHHHH-HHHcCCCC-----
Confidence 1 123567999999999999999999999999999998 9999965321 11111 11111110
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.........+.+++.+||+.||++||++.+|++.|+.+...
T Consensus 270 -----~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 270 -----PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -----CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 01112234577889999999999999999999999988543
No 41
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.8e-41 Score=359.05 Aligned_cols=246 Identities=23% Similarity=0.388 Sum_probs=199.8
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC--HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|... +++.||||+++..... ...+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 467999999999999975 6899999999754221 34688999999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC---
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT--- 494 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--- 494 (632)
+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999997542 3488999999999999999999998 99999999999999999999999999997654321
Q ss_pred ---CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 495 ---VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 495 ---~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
...++..|+|||.+.+..++.++|||||||++|||+| |+.||..... ..+...+..+... ..
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~-------~~ 336 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-------QQTREFVEKGGRL-------PC 336 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH-------HHHHHHHHTTCCC-------CC
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCC-------CC
Confidence 1123567999999998889999999999999999999 9999975321 1111222221110 01
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.. .....+.+++.+||+.||++|||+.++++.|+++..
T Consensus 337 ~~---~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 337 PE---LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 11 122357788899999999999999999999998853
No 42
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-40 Score=344.71 Aligned_cols=258 Identities=24% Similarity=0.371 Sum_probs=195.5
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhh-cCCCCccceeEEEEeC----CceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRL-SQHPNVVPIRAYYFSK----DEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... ++.||||++.... ...+..|.+++... .+||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 468999999999999886 8999999996543 33445555555433 2899999999999987 67899999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc-----CCCceecCCCCCCeeecCCCCeEEcccCCCCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV-----GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM 490 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 490 (632)
+|+|.++++.. .+++..+..++.+++.||+|||+.. .++|+||||||+|||++.++.+||+|||+++..
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 99999999753 4889999999999999999999752 348999999999999999999999999999665
Q ss_pred CCCC--------CCCCCCcccCCccccCCCCCcc------chhhHHHHHHHHHHhC----------CCCCCCCCCCCCCC
Q 006747 491 NTPT--------VPSRSAGYRAPEVIETKKPTQK------SDVYSFGVLLLEMLTG----------KAPIQAPGHEDVVD 546 (632)
Q Consensus 491 ~~~~--------~~~~t~~y~aPE~~~~~~~~~~------~DV~s~Gvvl~elltg----------~~p~~~~~~~~~~~ 546 (632)
.... ...+|+.|+|||.+.+..++.+ +|||||||++|||+|| +.||........ .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-~ 271 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP-S 271 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-C
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC-c
Confidence 4321 2358889999999988776665 9999999999999999 555543222111 1
Q ss_pred hhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
. ........... ..+.........+....+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 272 ~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 272 Y-EDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp H-HHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred h-hhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 1 11111111111 11111111112345667889999999999999999999999999986653
No 43
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.9e-40 Score=344.68 Aligned_cols=251 Identities=14% Similarity=0.188 Sum_probs=200.8
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
.+.||+|+||.||+|.. .+++.||||++.... ....+..|++++.++.+||||+++++++...+..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 36799999999999995 568999999987543 23458899999999988999999999999999999999999 9999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC-----eEEcccCCCCCCCCC-
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ-----GCISDFGLTPLMNTP- 493 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~-----~ki~DfGla~~~~~~- 493 (632)
.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99998542 3589999999999999999999998 9999999999999999887 999999999765332
Q ss_pred ----------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006747 494 ----------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563 (632)
Q Consensus 494 ----------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (632)
....+|+.|+|||.+.+..++.++|||||||++|||++|+.||.+....+. ..............
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~-- 239 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKIGDTKRAT-- 239 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHHHHHHHHS--
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHHHhhhccC--
Confidence 234588999999999999999999999999999999999999986543322 11111111110000
Q ss_pred ccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 564 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.... ..... .++.+++..||+.||.+||++.+|.+.|+++..
T Consensus 240 -~~~~-~~~~~----p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 240 -PIEV-LCENF----PEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp -CHHH-HTTTC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred -CHHH-HhccC----hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 0000 00011 167888899999999999999999999987743
No 44
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=347.73 Aligned_cols=238 Identities=18% Similarity=0.299 Sum_probs=190.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|.. .+|+.||||++..... ....+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 36799999999999985 5689999999976532 234688999999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++......
T Consensus 94 ~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 94 ELFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 9999987543 488999999999999999999998 9999999999999999999999999998765432
Q ss_pred -CCCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 -TVPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||.... .............. ..
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---------~p 230 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMRGKYD---------VP 230 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------CC
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---------CC
Confidence 23358899999999988875 899999999999999999999996532 12222222221110 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
... ...+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~---s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 KWL---SPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCC---CHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 111 2346678889999999999999999974
No 45
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=336.87 Aligned_cols=261 Identities=17% Similarity=0.229 Sum_probs=204.5
Q ss_pred hHhCccceeEEEEEEEcC-CcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCC--ceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILEE-GTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD--EKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~E~~~~ 416 (632)
+.||+|+||.||+|.... ++.||||+++... ...+.+.+|++++.++ +||||+++++++.... ..++||||+++
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 579999999999999654 8999999997543 3457788999999999 8999999999998765 67999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee----cCCCCeEEcccCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL----SQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl----~~~~~~ki~DfGla~~~~~ 492 (632)
|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 94 ~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 94 GSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp CBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999986532 23489999999999999999999998 99999999999999 8888999999999987654
Q ss_pred CC---CCCCCCcccCCcccc--------CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc--
Q 006747 493 PT---VPSRSAGYRAPEVIE--------TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW-- 559 (632)
Q Consensus 493 ~~---~~~~t~~y~aPE~~~--------~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 559 (632)
.. ...+|..|+|||.+. +..++.++|||||||++|||+||+.||....... .....+........
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~p~~ 246 (319)
T 4euu_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPSG 246 (319)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG--GCHHHHHHHHHHCCTT
T ss_pred CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc--hhHHHHHHHhcCCCcc
Confidence 32 335888999999986 5678999999999999999999999997543221 11222222222111
Q ss_pred -ccccc---------cccccc-cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhC
Q 006747 560 -TSEVF---------DVELMR-YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610 (632)
Q Consensus 560 -~~~~~---------d~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 610 (632)
...+. ...... ..........+.+++.+||+.||++|||++|++++..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 00000 001111 1123455566888999999999999999999999998754
No 46
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.9e-40 Score=336.82 Aligned_cols=253 Identities=14% Similarity=0.178 Sum_probs=201.7
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
+.||+|+||.||+|.. .+++.||||++.... ....+.+|++++.++.+|+|++++++++......++||||+ +|+|.
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 93 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLE 93 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHH
Confidence 5799999999999995 568999999986542 33458889999999988999999999999999999999999 99999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC-----eEEcccCCCCCCCCC--
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ-----GCISDFGLTPLMNTP-- 493 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~-----~ki~DfGla~~~~~~-- 493 (632)
+++.... .++++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.....
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 94 DLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 9998642 3589999999999999999999998 9999999999999988776 999999999765432
Q ss_pred ---------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 494 ---------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 494 ---------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
....+|+.|+|||.+.+..++.++|||||||++|||++|+.||..............+..........
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--- 243 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR--- 243 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH---
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHH---
Confidence 22357889999999999999999999999999999999999997643322211111111100000000
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
.. .. .....+.+++.+||+.||++|||+++|++.|+++....
T Consensus 244 --~~--~~---~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 244 --EL--CA---GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp --HH--TT---TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred --HH--Hh---hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 00 00 11245778889999999999999999999999986543
No 47
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.7e-41 Score=342.30 Aligned_cols=254 Identities=22% Similarity=0.392 Sum_probs=196.3
Q ss_pred HhHhCccceeEEEEEEE-----cCCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEeC--CceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAIL-----EEGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFSK--DEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~E 412 (632)
.+.||+|+||.||+|.+ .+++.||||++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEE
Confidence 36799999999999984 3588999999975432 246789999999999 899999999998654 45899999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 492 (632)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999997653 2488999999999999999999998 999999999999999999999999999987643
Q ss_pred CC-------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCC--------CCCCC-hhHHHHHHhh
Q 006747 493 PT-------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGH--------EDVVD-LPRWVQSVVR 556 (632)
Q Consensus 493 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~--------~~~~~-~~~~~~~~~~ 556 (632)
.. ...++..|+|||.+.+..++.++|||||||++|||+||..|+..... ..... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 32 22355669999999999999999999999999999999999854210 00000 0001111111
Q ss_pred hccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 557 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.... ..........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 247 ~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 247 NNGR----------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCc----------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 1110 011112234577888999999999999999999999998543
No 48
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.5e-40 Score=338.54 Aligned_cols=257 Identities=22% Similarity=0.364 Sum_probs=196.6
Q ss_pred HhHhCccceeEEEEEEEcC-C-------cEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEE
Q 006747 341 AEVLGKGSYGTTYKAILEE-G-------TTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~-------~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 411 (632)
.+.||+|+||.||+|.... + ..||+|++.... ...+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEE
Confidence 3579999999999998543 3 479999997653 3457799999999999 8999999999999999999999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC--------eEEcc
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ--------GCISD 483 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~--------~ki~D 483 (632)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 92 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp ECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred ECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999998643 3488999999999999999999998 9999999999999999887 99999
Q ss_pred cCCCCCCCCCCCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccc
Q 006747 484 FGLTPLMNTPTVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562 (632)
Q Consensus 484 fGla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (632)
||+++.........++..|+|||.+.+ ..++.++|||||||++|||++|..|+.... ...... ........
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~-~~~~~~~~-- 236 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKL-QFYEDRHQ-- 236 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHH-HHHHTTCC--
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHH-HHhhccCC--
Confidence 999977655444457888999999987 678999999999999999999655543221 111111 11111100
Q ss_pred cccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCCCCCCCCccc
Q 006747 563 VFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQPSSEDK 623 (632)
Q Consensus 563 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~~~~~~~~~ 623 (632)
+. .. ....+.+++.+||+.||++|||+.|+++.|+++......+..++.+.
T Consensus 237 -~~------~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~~~~~~ 287 (289)
T 4fvq_A 237 -LP------AP---KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHH 287 (289)
T ss_dssp -CC------CC---SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-------------
T ss_pred -CC------CC---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCCccccc
Confidence 00 00 01246678889999999999999999999999987766555554443
No 49
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1e-40 Score=336.37 Aligned_cols=245 Identities=26% Similarity=0.407 Sum_probs=187.5
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEeccccc-----CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM-----GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... +..||||+++.... ..+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEEEEcCC
Confidence 357999999999999975 89999999875422 246789999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC--------CCCeEEcccCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ--------DLQGCISDFGLT 487 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~--------~~~~ki~DfGla 487 (632)
+|+|.+++... ++++..+..++.+++.||+|||+....+|+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 99999998643 4889999999999999999999982223999999999999986 778999999999
Q ss_pred CCCCCCC--CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 488 PLMNTPT--VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 488 ~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
+...... ...+++.|+|||.+.+..++.++||||||+++|||+||+.||..... ..............
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~---- 233 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG------LAVAYGVAMNKLAL---- 233 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHTSCCCC----
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHhhhcCCCCC----
Confidence 8765432 34578899999999999999999999999999999999999975321 11111111111110
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhh
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 609 (632)
.........+.+++.+||+.||++|||+.|++++|+++
T Consensus 234 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 ------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00111224577888999999999999999999999864
No 50
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-40 Score=343.99 Aligned_cols=242 Identities=18% Similarity=0.309 Sum_probs=197.7
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
+.||+|+||.||++... ++..||+|.++........+.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 57999999999999865 578999999976554556789999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC--CCCeEEcccCCCCCCCCCCC---
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ--DLQGCISDFGLTPLMNTPTV--- 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~--~~~~ki~DfGla~~~~~~~~--- 495 (632)
+++.... .++++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 90 ~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 162 (321)
T 1tki_A 90 ERINTSA----FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL 162 (321)
T ss_dssp HHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcccc
Confidence 9997542 3588999999999999999999998 9999999999999997 79999999999987654322
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcH
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 575 (632)
..+|+.|+|||.+.+..++.++|||||||++|||++|+.||..... ............. ++.. ....
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~---~~~~--~~~~-- 229 (321)
T 1tki_A 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMNAEYT---FDEE--AFKE-- 229 (321)
T ss_dssp EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCC---CCHH--HHTT--
T ss_pred ccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHcCCCC---CChh--hhcc--
Confidence 3478899999999988899999999999999999999999975321 1122222211111 0000 0011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 576 ~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
...++.+++.+||+.||++|||+.|++++
T Consensus 230 -~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 230 -ISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12356788899999999999999999983
No 51
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.4e-40 Score=342.73 Aligned_cols=251 Identities=24% Similarity=0.373 Sum_probs=192.9
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
+.||+|+||.||+|...+|+.||+|+++..... ...+.+|++++.++ +||||+++++++.+.+..++||||+++ +
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~-~ 104 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEK-D 104 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSE-E
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCC-C
Confidence 579999999999999988999999999754322 35788999999999 899999999999999999999999985 8
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----C
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----T 494 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~ 494 (632)
|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 105 l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 177 (311)
T 3niz_A 105 LKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT 177 (311)
T ss_dssp HHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCccccc
Confidence 888876542 3488999999999999999999998 9999999999999999999999999999776432 2
Q ss_pred CCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccc---cccc----
Q 006747 495 VPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSE---VFDV---- 566 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~---- 566 (632)
...+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+. ...+........... ..+.
T Consensus 178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~ 254 (311)
T 3niz_A 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELPLWK 254 (311)
T ss_dssp CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSHHHH
T ss_pred CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccchhh
Confidence 3357889999999876 4589999999999999999999999976543332 111111111100000 0000
Q ss_pred --ccc--ccCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 567 --ELM--RYENI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 567 --~~~--~~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
... ..... .....++.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 00000 011245778899999999999999999987
No 52
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=6.1e-40 Score=341.29 Aligned_cols=238 Identities=21% Similarity=0.300 Sum_probs=195.6
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEV----VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||++... +|+.||+|++++. ......+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 367999999999999965 5899999999754 23456788999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|..++...+ .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 89 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 89 GGELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp TCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999987542 478899999999999999999998 9999999999999999999999999999864322
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............. . .
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~-------~--p 225 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILMEEIR-------F--P 225 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC-------C--C
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHHHcCCCC-------C--C
Confidence 23358899999999999999999999999999999999999996532 11122222211110 0 1
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRP-----TMEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~~ 605 (632)
... ...+.+++.+||+.||++|| +++|++++
T Consensus 226 ~~~---s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RTL---SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TTS---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCC---CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 111 23467788899999999999 89999764
No 53
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.4e-40 Score=348.19 Aligned_cols=240 Identities=20% Similarity=0.310 Sum_probs=191.8
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC----HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG----KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.++||+|+||+||+|+.. +++.||+|++++.... .+.+..|..++.++.+|||||++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 468999999999999965 4789999999865322 23578899999888789999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC---
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT--- 492 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--- 492 (632)
+|+|..++...+ .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 137 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 999999997543 488999999999999999999998 999999999999999999999999999986322
Q ss_pred -CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCC--CChhHHHHHHhhhcccccccccccc
Q 006747 493 -PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDV--VDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 493 -~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ......+...+..... .
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------~ 280 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------R 280 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--------C
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--------C
Confidence 2334689999999999999999999999999999999999999975432221 1111222222222111 0
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTM 599 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 599 (632)
.... ....+.+++.+||+.||++||++
T Consensus 281 ~p~~---~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 IPRS---LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCTT---SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCCc---CCHHHHHHHHHHhcCCHhHcCCC
Confidence 0111 12356788889999999999995
No 54
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1e-40 Score=350.70 Aligned_cols=252 Identities=26% Similarity=0.368 Sum_probs=200.4
Q ss_pred HhHhCccceeEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCc-eEEEE
Q 006747 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDE-KLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-~~lv~ 411 (632)
.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++.++.+||||++++++|.+.+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 36799999999999973 2457899999976432 235699999999999889999999999987654 89999
Q ss_pred ecccCCCHhhhhccCCCC-------------------------------------------------------------C
Q 006747 412 DFIEAGSFSALLHGNRGI-------------------------------------------------------------G 430 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~-------------------------------------------------------------~ 430 (632)
||+++|+|.++++..... .
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 999999999999865321 0
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC------CCCCCCcccC
Q 006747 431 RTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT------VPSRSAGYRA 504 (632)
Q Consensus 431 ~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~------~~~~t~~y~a 504 (632)
...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...+|..|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 12388999999999999999999998 99999999999999999999999999998664322 2236778999
Q ss_pred CccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHH
Q 006747 505 PEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQ 583 (632)
Q Consensus 505 PE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 583 (632)
||.+.+..++.++|||||||++|||+| |+.||.+....+ .+........... .... ....+.+
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~-------~~~~---~~~~l~~ 327 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMR-------APDY---TTPEMYQ 327 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCC-------CCTT---CCHHHHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCC-------CCCC---CCHHHHH
Confidence 999999999999999999999999999 999997543221 1111122211110 0011 1235778
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 584 IAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 584 l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
++.+||+.||++|||+.|++++|+++.+
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 8899999999999999999999998753
No 55
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-39 Score=333.24 Aligned_cols=253 Identities=21% Similarity=0.318 Sum_probs=200.4
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccC----HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG----KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||+|.. .++..||+|++...... .+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 5799999999999985 46889999998654322 35688999999999 899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC--
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-- 494 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-- 494 (632)
|+|.+++.... ++++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 96 PTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 99999997542 588999999999999999999998 99999999999999999999999999998765432
Q ss_pred ---CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 495 ---VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 495 ---~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
...+|+.|+|||.+.+..++.++|||||||++|||+||+.||.+... .........+.... ......
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~----~~~~~~ 237 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDSVPN----VTTDVR 237 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSCCCC----HHHHSC
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhccCCC----cchhcc
Confidence 23478999999999999999999999999999999999999975321 11111111111100 000000
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhhCCCCCCC
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRP-TMEEVVRMIEDIRPSDSEN 616 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~evl~~L~~i~~~~~~~ 616 (632)
.. ....+.+++.+||+.||++|| +++++.+.|+.+......+
T Consensus 238 ~~---~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~ 280 (294)
T 4eqm_A 238 KD---IPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRAN 280 (294)
T ss_dssp TT---SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTT
T ss_pred cC---CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCC
Confidence 11 123567788899999999998 9999999999986664433
No 56
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.5e-40 Score=365.82 Aligned_cols=247 Identities=26% Similarity=0.411 Sum_probs=204.5
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||+|...++..||||+++......++|.+|++++.++ +|+||+++++++.+ +..++||||+++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 467999999999999998888999999987766778899999999999 89999999999866 6789999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-----CC
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-----TV 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-----~~ 495 (632)
++++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..... ..
T Consensus 350 ~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 350 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred HHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 9997532 13488999999999999999999998 9999999999999999999999999999876532 22
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
..++..|+|||.+.+..++.++|||||||++|||+| |+.||.+... ..... .+..+... ...
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~------~~~~~-~i~~~~~~----------~~~ 486 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLD-QVERGYRM----------PCP 486 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH------HHHHH-HHHTTCCC----------CCC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHH-HHHcCCCC----------CCC
Confidence 345678999999999999999999999999999999 9999975321 11111 11121110 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
......+.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 11234577888999999999999999999999998655
No 57
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-40 Score=331.36 Aligned_cols=247 Identities=25% Similarity=0.437 Sum_probs=205.5
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||++...++..||+|++.......+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 357999999999999988889999999988766778899999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-----CC
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-----TV 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-----~~ 495 (632)
+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++..... ..
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9997642 3588999999999999999999998 9999999999999999999999999999866432 23
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ....... ...... . ....
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~i-~~~~~~--~-----~~~~- 229 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDI-STGFRL--Y-----KPRL- 229 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHH-HTTCCC--C-----CCTT-
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH------HHHHHHH-hcCCcC--C-----CCcc-
Confidence 346678999999998899999999999999999999 8999865321 1111111 111110 0 0011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
....+.+++.+||+.||++|||+.+++++|+++.+.
T Consensus 230 --~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 230 --ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 123567888999999999999999999999998653
No 58
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-39 Score=333.51 Aligned_cols=249 Identities=30% Similarity=0.451 Sum_probs=194.9
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|... ..+|+|+++..... .+.+.+|++++.++ +||||+++++++. .+..++||||+++|
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 367999999999999864 46899998765433 35688999999999 8999999999864 56689999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 117 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred cHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999997542 3589999999999999999999998 9999999999999999999999999999765421
Q ss_pred --CCCCCCCcccCCcccc---CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIE---TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~---~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
....+|+.|+|||.+. +..++.++|||||||++|||+||+.||......+ .+.......... +.+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~----~~~ 259 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGYAS----PDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHHTCCC----CCS
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH------HHHHHHhcCCCC----cch
Confidence 2335889999999986 5668999999999999999999999997543211 111111111111 111
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.. ........+.+++.+||+.+|++|||+.|+++.|+.+...
T Consensus 260 ~~--~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 260 SK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TT--SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred hh--hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 00 0011224577888899999999999999999999988654
No 59
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.7e-40 Score=344.26 Aligned_cols=247 Identities=19% Similarity=0.314 Sum_probs=179.0
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
+.||+|+||.||++... +++.||||++... ....+.+|++++.++.+||||+++++++.+....++||||+++|+|.
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 57999999999999964 5899999999753 35678899999999956999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC---CeEEcccCCCCCCCCC----
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL---QGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~---~~ki~DfGla~~~~~~---- 493 (632)
+++... .++++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 95 ~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 95 ERIKKK-----KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 999764 2589999999999999999999998 999999999999998765 8999999999765433
Q ss_pred CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 494 TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
....+|..|+|||.+.+..++.++|||||||++|||++|+.||..................+..+... +.. ..
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~--~~~-----~~ 239 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS--FEG-----EA 239 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC--CCS-----HH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC--CCc-----cc
Confidence 23357889999999999999999999999999999999999997654322211111121222111110 000 00
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
......++.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 01123457788899999999999999998753
No 60
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=346.26 Aligned_cols=252 Identities=23% Similarity=0.397 Sum_probs=201.3
Q ss_pred HhHhCccceeEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE------EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|... +++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEe
Confidence 357999999999999974 348899999976432 246789999999999 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCCC-------------------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee
Q 006747 413 FIEAGSFSALLHGNRGI-------------------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL 473 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl 473 (632)
|+++|+|.+++...... ...++++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEE
Confidence 99999999999764211 125689999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccCCCCCCCC------CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006747 474 SQDLQGCISDFGLTPLMNT------PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546 (632)
Q Consensus 474 ~~~~~~ki~DfGla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~ 546 (632)
++++.+||+|||+++.... .....+|..|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----- 282 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH----- 282 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-----
Confidence 9999999999999865432 223356788999999998899999999999999999999 9999965321
Q ss_pred hhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
..... .+.+..... ... .....+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 283 -~~~~~-~~~~~~~~~-------~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 -EEVIY-YVRDGNILA-------CPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -HHHHH-HHHTTCCCC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -HHHHH-HHhCCCcCC-------CCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 11111 111211110 001 12235778889999999999999999999999987653
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=343.04 Aligned_cols=242 Identities=20% Similarity=0.348 Sum_probs=196.4
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM-------GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||++... +|..||+|+++.... ..+.+.+|++++.++ +||||+++++++.+....++|||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEE
Confidence 467999999999999965 589999999975422 357799999999999 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC----CeEEcccCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL----QGCISDFGLTP 488 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~----~~ki~DfGla~ 488 (632)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++ .+||+|||+++
T Consensus 95 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 95 LVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp CCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred cCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999754 2588999999999999999999998 999999999999999887 89999999997
Q ss_pred CCCCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 489 LMNTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 489 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+... ............. +.
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~---~~ 237 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANVSAVNYE---FE 237 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHTCCC---CC
T ss_pred ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHHhcCCC---cC
Confidence 76432 334588999999999999999999999999999999999999965321 1111111111000 00
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
... .. .....+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~--~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 238 DEY--FS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHH--HT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ccc--cc---cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 00 112356788899999999999999999873
No 62
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.8e-40 Score=344.09 Aligned_cols=241 Identities=20% Similarity=0.345 Sum_probs=196.2
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM-------GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||++... +|+.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEEEEEE
Confidence 367999999999999965 589999999976432 246799999999999 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC----CeEEcccCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL----QGCISDFGLTP 488 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~----~~ki~DfGla~ 488 (632)
|+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++ .+||+|||+++
T Consensus 96 ~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999754 2588999999999999999999998 999999999999998877 79999999998
Q ss_pred CCCCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 489 LMNTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 489 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ............. ++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~---~~ 238 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITAVSYD---FD 238 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCCC---CC
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCCC---CC
Confidence 76543 334589999999999999999999999999999999999999975321 1111221111100 01
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
... +.. ....+.+++.+||..||++|||+.|+++
T Consensus 239 ~~~--~~~---~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEF--FSQ---TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHH--HTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chh--ccC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 100 011 1234677888999999999999999885
No 63
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-40 Score=345.86 Aligned_cols=245 Identities=22% Similarity=0.373 Sum_probs=192.9
Q ss_pred HhHhCccceeEEEEEEEc-CCc----EEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE-EGT----TVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|... +++ .||+|.++... ...+.+.+|++++.++ +||||++++++|.+. ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecC-CeEEEEEe
Confidence 367999999999999853 344 35888876432 3457899999999999 899999999999875 47899999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999998643 3588999999999999999999998 9999999999999999999999999998765432
Q ss_pred C------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 494 T------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 494 ~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
. ...+|..|+|||.+.+..++.++|||||||++|||+| |+.||......+ +. ..+......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~----~~~~~~~~~----- 238 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEKGERL----- 238 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHTTCCC-----
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HH----HHHHcCCCC-----
Confidence 2 2235678999999999999999999999999999999 999997543221 11 111111100
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.........+.+++.+||+.||++|||+.+++++|+.+..
T Consensus 239 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 239 -----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -----CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0111123457788899999999999999999999998754
No 64
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=351.04 Aligned_cols=251 Identities=21% Similarity=0.329 Sum_probs=199.3
Q ss_pred HhHhCccceeEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE------EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|... ++..||||+++.... ....+.+|+.++.++ +||||+++++++......++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEE
Confidence 367999999999999843 467899999975422 245688999999999 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCCC--CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC---CeEEcccCCC
Q 006747 413 FIEAGSFSALLHGNRGI--GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL---QGCISDFGLT 487 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~---~~ki~DfGla 487 (632)
|+++|+|.+++...+.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 99999999999765321 224589999999999999999999998 999999999999999554 5999999998
Q ss_pred CCCC------CCCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 488 PLMN------TPTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 488 ~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
+... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||..... ....... .....
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~------~~~~~~i-~~~~~ 304 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFV-TSGGR 304 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHH-HTTCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHH-HcCCC
Confidence 6432 1222346788999999999999999999999999999998 9999965321 1111111 11111
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.. ... .....+.+++.+||+.||++|||+.+|+++|+.+...
T Consensus 305 ~~-------~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 305 MD-------PPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC-------CCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 00 011 1223577888999999999999999999999987544
No 65
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.1e-40 Score=346.28 Aligned_cols=255 Identities=17% Similarity=0.206 Sum_probs=190.7
Q ss_pred HhHhCccceeEEEEEEEcC------CcEEEEEEecccccC------------HHHHHHHHHHHHhhcCCCCccceeEEEE
Q 006747 341 AEVLGKGSYGTTYKAILEE------GTTVVVKRLKEVVMG------------KREFEQQMEVVGRLSQHPNVVPIRAYYF 402 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~------~~~vavK~~~~~~~~------------~~~~~~e~~~l~~l~~h~niv~l~~~~~ 402 (632)
.+.||+|+||.||+|.... ++.||||++...... ...+..|+..+..+ +|+||+++++++.
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~ 118 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGVPKYWGSGL 118 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCSCCEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCCCeEEeeee
Confidence 3679999999999998754 478999998654210 11122333344455 6999999999998
Q ss_pred eC----CceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec--CC
Q 006747 403 SK----DEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS--QD 476 (632)
Q Consensus 403 ~~----~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~--~~ 476 (632)
.. ...++||||+ +|+|.+++.... .++++..+..++.|++.||+|||+. +|+||||||+|||++ .+
T Consensus 119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 119 HDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCT
T ss_pred eccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCC
Confidence 75 3479999999 999999997642 3589999999999999999999998 999999999999999 88
Q ss_pred CCeEEcccCCCCCCCCC-----------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCC
Q 006747 477 LQGCISDFGLTPLMNTP-----------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV 545 (632)
Q Consensus 477 ~~~ki~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~ 545 (632)
+.+||+|||+++.+... ....+|+.|+|||.+.+..++.++|||||||++|||+||+.||.+.....
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-- 268 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-- 268 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH--
Confidence 99999999999765321 12238899999999999999999999999999999999999997532211
Q ss_pred ChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 546 DLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
....+....... ....+++..+.. .. ...++.+++..||+.+|++||++.++++.|+++..
T Consensus 269 ~~~~~~~~~~~~-~~~~~~~~~~~~-~~---~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 269 KYVRDSKIRYRE-NIASLMDKCFPA-AN---APGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp HHHHHHHHHHHH-CHHHHHHHHSCT-TC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh-hHHHHHHHhccc-cc---CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 111111111111 111122221111 11 12357788889999999999999999999988744
No 66
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.3e-40 Score=342.54 Aligned_cols=240 Identities=17% Similarity=0.311 Sum_probs=190.8
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCc-----------
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDE----------- 406 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 406 (632)
.+.||+|+||.||+|... +|+.||||+++.... ..+.+.+|++++.++ +||||++++++|.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 367999999999999975 789999999975432 356799999999999 89999999999876542
Q ss_pred ----------------------------------------------eEEEEecccCCCHhhhhccCCCCCCCcCCHHHHH
Q 006747 407 ----------------------------------------------KLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRV 440 (632)
Q Consensus 407 ----------------------------------------------~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~ 440 (632)
.++||||+++|+|.+++..... .....+..+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHH
Confidence 7999999999999999986542 3446777889
Q ss_pred HHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----------------CCCCCCCcccC
Q 006747 441 KISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----------------TVPSRSAGYRA 504 (632)
Q Consensus 441 ~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----------------~~~~~t~~y~a 504 (632)
.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....+|+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 9999999999999998 9999999999999999999999999999776543 22357889999
Q ss_pred CccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHH
Q 006747 505 PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQI 584 (632)
Q Consensus 505 PE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 584 (632)
||.+.+..++.++|||||||++|||++|..|+.. ....... ...... ..........+.++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--------~~~~~~~-~~~~~~----------~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--------RVRIITD-VRNLKF----------PLLFTQKYPQEHMM 305 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------HHHHHHH-HHTTCC----------CHHHHHHCHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--------HHHHHHH-hhccCC----------CcccccCChhHHHH
Confidence 9999999999999999999999999998776421 0001111 111100 01112233456789
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 006747 585 AMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 585 ~~~Cl~~~P~~RPs~~evl~~ 605 (632)
+.+||+.||++|||+.|++++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 999999999999999999863
No 67
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=336.72 Aligned_cols=250 Identities=27% Similarity=0.431 Sum_probs=193.0
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||+|... ++.||||++... ...+.+.+|++++.++ +||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 367999999999999875 789999999753 2356799999999999 8999999999876 4589999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC-eEEcccCCCCCCCCC-CCCCC
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ-GCISDFGLTPLMNTP-TVPSR 498 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~-~ki~DfGla~~~~~~-~~~~~ 498 (632)
+++..... ...+++..++.++.++++||+|||+....+|+||||||+||+++.++. +||+|||+++..... ....+
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 88 NVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 99986532 234788899999999999999999943338999999999999998886 799999999766543 23458
Q ss_pred CCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHHH
Q 006747 499 SAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEM 578 (632)
Q Consensus 499 t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 578 (632)
|..|+|||.+.+..++.++|||||||++|||+||+.||...... ........ ....... ......
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~-~~~~~~~----------~~~~~~ 230 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWAV-HNGTRPP----------LIKNLP 230 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHHH-HTTCCCC----------CBTTCC
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHHH-hcCCCCC----------cccccC
Confidence 89999999999999999999999999999999999999753321 11111111 1111110 011112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 579 VQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 579 ~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 3567888899999999999999999999988654
No 68
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=345.91 Aligned_cols=238 Identities=23% Similarity=0.318 Sum_probs=193.1
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEV----VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... +++.||||++++. ....+.+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 367999999999999965 5899999999754 22345688899999988689999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|..++...+ .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 108 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 108 GGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 999999997643 488999999999999999999998 9999999999999999999999999999864322
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... -.
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~---------~p 244 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAILNDEVV---------YP 244 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------CC
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCC---------CC
Confidence 234589999999999988899999999999999999999999975321 1222222221110 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTM------EEVVR 604 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~------~evl~ 604 (632)
.. ....+.+++.+||+.||++||++ .|+++
T Consensus 245 ~~---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TW---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 12346678889999999999998 67665
No 69
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.1e-40 Score=332.83 Aligned_cols=244 Identities=23% Similarity=0.418 Sum_probs=193.8
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccC--------HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG--------KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~--------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
+.||+|+||.||+|.. .+++.||+|++...... .+.+.+|++++.++ +||||+++++++.+.. ++|||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT--EEEEE
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC--eEEEE
Confidence 5799999999999996 46899999998654221 16789999999999 8999999999985543 79999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCeeecCCCC-----eEEcccC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK--FILGNIKSSNVLLSQDLQ-----GCISDFG 485 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrDlk~~NILl~~~~~-----~ki~DfG 485 (632)
|+++|+|.+++.... .++++..+..++.+++.||+|||+. + |+||||||+||+++.++. +||+|||
T Consensus 102 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 102 FVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp CCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred ecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 999999999887542 3589999999999999999999998 7 999999999999988776 9999999
Q ss_pred CCCCCCCC-CCCCCCCcccCCcccc--CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccc
Q 006747 486 LTPLMNTP-TVPSRSAGYRAPEVIE--TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562 (632)
Q Consensus 486 la~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (632)
+++..... ....+|+.|+|||.+. ...++.++|||||||++|||++|+.||....... ...............
T Consensus 175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~ 250 (287)
T 4f0f_A 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEGLRPT 250 (287)
T ss_dssp TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHHSCCCCC
T ss_pred ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhccCCCCC
Confidence 99865543 2345888999999984 4457899999999999999999999997543221 111111111111110
Q ss_pred cccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhh
Q 006747 563 VFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609 (632)
Q Consensus 563 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 609 (632)
........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 251 ----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 ----------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ----------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0111224577888999999999999999999999874
No 70
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.3e-39 Score=347.24 Aligned_cols=243 Identities=19% Similarity=0.307 Sum_probs=188.8
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEe----CCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS----KDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~E~~~~ 416 (632)
+.||+|+||+||++... +++.||||+++. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 47999999999999865 588999999964 34677888888777799999999999876 5568999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC---CCCeEEcccCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---DLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~~ 493 (632)
|+|.+++.... ...+++..+..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999998642 34589999999999999999999998 9999999999999998 789999999999866432
Q ss_pred ---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCC-ChhHHHHHHhhhcccccccccccc
Q 006747 494 ---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV-DLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ..... ....... ... .
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---i~~~~~~--~~~---~ 289 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR---IRMGQYE--FPN---P 289 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH---HHHTCCC--CCT---T
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH---HHcCccc--CCC---c
Confidence 3345789999999999999999999999999999999999999765432211 11111 1111110 000 0
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.... ...++.+++.+||+.||++|||+.|++++
T Consensus 290 ~~~~---~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 EWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTT---SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cccc---CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111 22356788889999999999999999985
No 71
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.4e-42 Score=350.35 Aligned_cols=255 Identities=23% Similarity=0.369 Sum_probs=183.1
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhh-cCCCCccceeEEEEeCC----ceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRL-SQHPNVVPIRAYYFSKD----EKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... ++.||||++... ....+..|.+++... .+||||+++++++.... ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 367999999999999875 899999998753 356677888888763 38999999999998876 7899999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHH--------hccCCCceecCCCCCCeeecCCCCeEEcccCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH--------AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla 487 (632)
+|+|.+++... .+++..+..++.+++.||+||| +. +|+||||||+|||++.++.+||+|||++
T Consensus 85 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred CCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999653 3677888999999999999999 65 9999999999999999999999999999
Q ss_pred CCCCCCCC--------CCCCCcccCCccccCC------CCCccchhhHHHHHHHHHHhC----------CCCCCCCCCCC
Q 006747 488 PLMNTPTV--------PSRSAGYRAPEVIETK------KPTQKSDVYSFGVLLLEMLTG----------KAPIQAPGHED 543 (632)
Q Consensus 488 ~~~~~~~~--------~~~t~~y~aPE~~~~~------~~~~~~DV~s~Gvvl~elltg----------~~p~~~~~~~~ 543 (632)
+....... ..+|+.|+|||.+.+. .++.++|||||||++|||+|| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 76543322 2588899999999876 334689999999999999999 66664432111
Q ss_pred CCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 544 VVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
. ........ ..+.. ..+.........+....+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 236 ~-~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 P-SVEEMRKV-VCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCC-CHHH-HTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred c-cHHHHHHH-HHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1 00111111 11111 11111111111245667889999999999999999999999999997764
No 72
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.8e-40 Score=342.35 Aligned_cols=241 Identities=21% Similarity=0.311 Sum_probs=192.7
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|... +++.||||++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 367999999999999865 689999999865432 235688999999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999754 2488999999999999999999998 9999999999999999999999999999765321
Q ss_pred --CCCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
....+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||........ ....+. .... ..
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~-----~~~~--~~------ 228 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK-----EKKT--YL------ 228 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHH-----TTCT--TS------
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHh-----cccc--cC------
Confidence 23468899999999988775 7789999999999999999999975432211 111111 1000 00
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.........+.+++.+||+.||++|||+.|++++
T Consensus 229 -~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 -NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0011122346678889999999999999999875
No 73
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.4e-40 Score=344.26 Aligned_cols=244 Identities=17% Similarity=0.305 Sum_probs=195.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc------cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV------MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEeC
Confidence 468999999999999864 68999999986431 2467899999999999 899999999999999999999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC---eEEcccCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ---GCISDFGLTPLM 490 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~~~ 490 (632)
+++|+|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 108 ~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 108 MDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999888764321 223578899999999999999999998 9999999999999987654 999999999776
Q ss_pred CCC----CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 491 NTP----TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 491 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.. ............. ..+
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~---~~~ 253 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYK---MNP 253 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCC---CCH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCC---CCc
Confidence 543 23458999999999999999999999999999999999999997521 1111111111110 000
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
. .... ....+.+++.+||+.||++|||+.|+++
T Consensus 254 ~--~~~~---~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 R--QWSH---ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp H--HHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c--cccc---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 0011 1235678888999999999999999986
No 74
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.3e-40 Score=330.22 Aligned_cols=248 Identities=23% Similarity=0.348 Sum_probs=198.5
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeC--CceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSK--DEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... +..||||+++..... .+.+.+|++++.++ +||||+++++++.+. ...++||||++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeeecccC
Confidence 367999999999999985 899999999865433 35688999999999 899999999999887 67899999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTV 495 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 495 (632)
+|+|.++++... ..++++..+..++.|++.||+|||+. +++|+||||||+||++++++.+||+|||++..... ..
T Consensus 93 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~ 167 (271)
T 3kmu_A 93 YGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PG 167 (271)
T ss_dssp TCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TT
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecc-cC
Confidence 999999998653 23589999999999999999999987 12299999999999999999999999998765433 23
Q ss_pred CCCCCcccCCccccCCCCCc---cchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 496 PSRSAGYRAPEVIETKKPTQ---KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~---~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
..+|+.|+|||.+.+..++. ++|||||||++|||+||+.||..... ............... . ..
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~-----~--~~ 234 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRPT-----I--PP 234 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCCC-----C--CT
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCCC-----C--CC
Confidence 45788999999998765544 79999999999999999999965321 111122221211111 0 01
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.....+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 235 ---~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 235 ---GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 122357788889999999999999999999999865
No 75
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8.2e-40 Score=344.09 Aligned_cols=244 Identities=19% Similarity=0.282 Sum_probs=189.9
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
.+.||+|+||.||++... +++.||||++.......+.+.+|+.++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 367999999999999965 689999999987655567899999999999 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC--eEEcccCCCCCCCC---CC
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ--GCISDFGLTPLMNT---PT 494 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~--~ki~DfGla~~~~~---~~ 494 (632)
.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.... ..
T Consensus 104 ~~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 104 YERICNAG-----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 99987542 488999999999999999999998 9999999999999988765 99999999975432 23
Q ss_pred CCCCCCcccCCccccCCCCCcc-chhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 495 VPSRSAGYRAPEVIETKKPTQK-SDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~~~~~~~-~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
...+|+.|+|||.+.+..++.+ +|||||||++|||++|+.||....... ............... ......
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~ 246 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYS-------IPDDIR 246 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCC-------CCTTSC
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCC-------CCCcCC
Confidence 3458899999999988887666 899999999999999999997643222 222222222221110 001111
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
. ...+.+++.+||+.||++|||+.|++++
T Consensus 247 ~---s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 247 I---SPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp C---CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred C---CHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1 2356788889999999999999999985
No 76
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-39 Score=338.67 Aligned_cols=237 Identities=22% Similarity=0.319 Sum_probs=194.0
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|++++..+ +||||+++++++.+.+..++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 36799999999999996 568999999997532 2345789999999999 8999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 92 ~g~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 92 GGELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 689998886542 488999999999999999999999 9999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 -TVPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||........... +........
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~---------------i~~~~~~~p 228 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK---------------VNSCVYVMP 228 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC---------------CCSSCCCCC
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH---------------HHcCCCCCc
Confidence 33468999999999988776 7899999999999999999999976433221110 000000001
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.. ....+.+++.+||+.||++|||++|++++
T Consensus 229 ~~---~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 229 DF---LSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp TT---SCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cc---CCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 11 12346678889999999999999999874
No 77
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-39 Score=340.63 Aligned_cols=245 Identities=20% Similarity=0.319 Sum_probs=194.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC----HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG----KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|+.. +++.||+|+++..... .+.+.+|.+++.++.+||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 367999999999999965 5889999999865332 24577889999887789999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC---
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT--- 492 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--- 492 (632)
+|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 94 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 999999997542 488999999999999999999998 999999999999999999999999999986432
Q ss_pred -CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCC--ChhHHHHHHhhhcccccccccccc
Q 006747 493 -PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV--DLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 493 -~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
.....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .........+..... .+
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~- 238 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RI- 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------CC-
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------CC-
Confidence 23346899999999999999999999999999999999999999754322111 111122222211111 00
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTM------EEVVR 604 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~------~evl~ 604 (632)
... ....+.+++.+||+.||++||++ .|+++
T Consensus 239 -p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 239 -PRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp -CTT---SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred -CCC---CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 111 12356778889999999999995 56654
No 78
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.6e-40 Score=341.40 Aligned_cols=252 Identities=23% Similarity=0.400 Sum_probs=189.6
Q ss_pred HhHhCccceeEEEEEEEcCC----cEEEEEEecccc---cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCce------
Q 006747 341 AEVLGKGSYGTTYKAILEEG----TTVVVKRLKEVV---MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEK------ 407 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~----~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------ 407 (632)
.+.||+|+||.||+|..... ..||||+++... ...+.+.+|++++.++ +||||+++++++......
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------CE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCCcc
Confidence 46799999999999986543 279999997642 2246789999999999 999999999999887655
Q ss_pred EEEEecccCCCHhhhhccCCC-CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCC
Q 006747 408 LLVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL 486 (632)
Q Consensus 408 ~lv~E~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 486 (632)
++||||+++|+|.+++..... .....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeeccc
Confidence 999999999999999864421 1223589999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006747 487 TPLMNTPT------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEW 559 (632)
Q Consensus 487 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (632)
++...... ...++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ ..........
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~ 257 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYLIGGNR 257 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCC
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHHhcCCC
Confidence 98764332 2235667999999999999999999999999999999 999997543211 1111111111
Q ss_pred ccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 560 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
. .........+.+++.+||+.||++|||+.++++.|+++....
T Consensus 258 ~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 258 L-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp C-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred C-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0 011112245778889999999999999999999999986553
No 79
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=337.04 Aligned_cols=238 Identities=22% Similarity=0.343 Sum_probs=186.4
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc---------------------------CHHHHHHHHHHHHhhcCCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM---------------------------GKREFEQQMEVVGRLSQHP 392 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~---------------------------~~~~~~~e~~~l~~l~~h~ 392 (632)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++.++ +||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 96 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHP 96 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC-CCT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC-CCC
Confidence 36799999999999986 4588999999965421 124588999999999 899
Q ss_pred CccceeEEEEe--CCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCC
Q 006747 393 NVVPIRAYYFS--KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSN 470 (632)
Q Consensus 393 niv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~N 470 (632)
||+++++++.+ .+..++||||+++|+|.+++.. .++++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 167 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSN 167 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHH
Confidence 99999999987 5678999999999999886543 3589999999999999999999998 99999999999
Q ss_pred eeecCCCCeEEcccCCCCCCCCC----CCCCCCCcccCCccccCCC---CCccchhhHHHHHHHHHHhCCCCCCCCCCCC
Q 006747 471 VLLSQDLQGCISDFGLTPLMNTP----TVPSRSAGYRAPEVIETKK---PTQKSDVYSFGVLLLEMLTGKAPIQAPGHED 543 (632)
Q Consensus 471 ILl~~~~~~ki~DfGla~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~ 543 (632)
||++.++.+||+|||+++..... ....+|+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--- 244 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--- 244 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc---
Confidence 99999999999999999766433 2346889999999998765 3788999999999999999999996432
Q ss_pred CCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 544 VVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
...+... +...... ....... ...+.+++.+||+.||++|||+.|+++
T Consensus 245 ---~~~~~~~-~~~~~~~------~~~~~~~---~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 ---IMCLHSK-IKSQALE------FPDQPDI---AEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ---HHHHHHH-HHHCCCC------CCSSSCC---CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---HHHHHHH-HhcccCC------CCCcccc---CHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1111111 1111110 0001111 235677888999999999999999875
No 80
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=341.30 Aligned_cols=263 Identities=21% Similarity=0.309 Sum_probs=192.9
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHH--HhhcCCCCccceeEEEEeC-----CceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVV--GRLSQHPNVVPIRAYYFSK-----DEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l--~~l~~h~niv~l~~~~~~~-----~~~~lv~E~ 413 (632)
.+.||+|+||.||+|.. +++.||||++.... ...+..|.++. ..+ +|+||+++++++... ...++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhc-cCcchhhheecccccccCCCceEEEEEec
Confidence 36799999999999977 58999999997543 33444444443 346 899999999876532 256899999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc------CCCceecCCCCCCeeecCCCCeEEcccCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV------GGKFILGNIKSSNVLLSQDLQGCISDFGLT 487 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivHrDlk~~NILl~~~~~~ki~DfGla 487 (632)
+++|+|.+++.... .++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 94 YPNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp CTTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred CCCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence 99999999997542 588999999999999999999863 238999999999999999999999999999
Q ss_pred CCCCCC------------CCCCCCCcccCCccccC-------CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCC-Ch
Q 006747 488 PLMNTP------------TVPSRSAGYRAPEVIET-------KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV-DL 547 (632)
Q Consensus 488 ~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~-~~ 547 (632)
+..... ....+|..|+|||.+.+ ..++.++|||||||++|||+||+.||......... ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~ 247 (336)
T 3g2f_A 168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247 (336)
T ss_dssp EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence 765422 12347889999999987 34677899999999999999998776443221111 10
Q ss_pred ----------hHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCCCC
Q 006747 548 ----------PRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616 (632)
Q Consensus 548 ----------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~~ 616 (632)
................+.. ...........+.+++.+||+.||++|||++|+++.|+++...-.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 248 FQTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp THHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred hhcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 0111111111111100000 11122334557889999999999999999999999999987665444
No 81
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=345.97 Aligned_cols=241 Identities=21% Similarity=0.342 Sum_probs=191.5
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
+.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 5699999999999986 468999999997643 2356799999999999 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee--cCCCCeEEcccCCCCCCCCC---C
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL--SQDLQGCISDFGLTPLMNTP---T 494 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl--~~~~~~ki~DfGla~~~~~~---~ 494 (632)
.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++..... .
T Consensus 174 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~ 246 (373)
T 2x4f_A 174 FDRIIDES----YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246 (373)
T ss_dssp HHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence 99886532 3588999999999999999999998 99999999999999 56789999999999876543 2
Q ss_pred CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 495 VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
...+|++|+|||++.+..++.++|||||||++|||++|+.||.+... ...........+.. ... ....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~~~~--~~~---~~~~- 314 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACRWDL--EDE---EFQD- 314 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCCS--CSG---GGTT-
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhccCCC--Chh---hhcc-
Confidence 33589999999999998999999999999999999999999975321 12222222221110 000 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
....+.+++.+||+.||++|||+.|+++
T Consensus 315 --~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 --ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1235678888999999999999999987
No 82
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=338.03 Aligned_cols=236 Identities=21% Similarity=0.303 Sum_probs=186.9
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||+||+|... +++.||||++...... ...+..|+..+.++.+|+||++++++|.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 457999999999999975 6899999998765333 2345566666666668999999999999999999999999 6
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
|+|.+++.... .+++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 79998887542 3589999999999999999999998 9999999999999999999999999998776543
Q ss_pred CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 494 TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
....+|++|+|||++.+ .++.++|||||||++|||++|..|+.... .| . .+..... .+...
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~-~-~~~~~~~----~~~~~---- 274 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------GW-Q-QLRQGYL----PPEFT---- 274 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------HH-H-HHTTTCC----CHHHH----
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HH-H-HHhccCC----Ccccc----
Confidence 23358899999999876 78999999999999999999977764311 01 0 1111111 11110
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
......+.+++.+||+.||++|||++|+++
T Consensus 275 -~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 -AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011245778889999999999999999986
No 83
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-40 Score=342.66 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=200.2
Q ss_pred HhHhCccceeEEEEEEE------cCCcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|.. .++..||||+++... ...+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 46899999999999985 245689999997542 2346799999999999789999999999999999999999
Q ss_pred cccCCCHhhhhccCCCC------------------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec
Q 006747 413 FIEAGSFSALLHGNRGI------------------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS 474 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~ 474 (632)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVT 206 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEEE
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEEc
Confidence 99999999999765321 013479999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccCCCCCCCCCCC------CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCCh
Q 006747 475 QDLQGCISDFGLTPLMNTPTV------PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDL 547 (632)
Q Consensus 475 ~~~~~ki~DfGla~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~ 547 (632)
.++.+||+|||+++....... ..+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.......
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 282 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA---- 282 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----
T ss_pred CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH----
Confidence 999999999999986643321 235677999999999999999999999999999998 999997643211
Q ss_pred hHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 548 PRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 548 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
............. ... .....+.+++.+||+.||++|||+.+++++|+.+....
T Consensus 283 --~~~~~~~~~~~~~-------~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 283 --NFYKLIQNGFKMD-------QPF---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp --HHHHHHHTTCCCC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred --HHHHHHhcCCCCC-------CCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 1112222211100 001 11245778888999999999999999999999987654
No 84
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.3e-39 Score=340.67 Aligned_cols=242 Identities=20% Similarity=0.328 Sum_probs=195.4
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||++... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 467999999999999864 5899999999765433 35688999999999 899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCC---CCeEEcccCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLMNTP 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~---~~~ki~DfGla~~~~~~ 493 (632)
|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+++.....
T Consensus 113 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 113 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999998754 2588999999999999999999998 99999999999999865 45999999999876543
Q ss_pred C---CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 494 T---VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 494 ~---~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
. ...+|+.|+|||++.+..++.++|||||||++|||++|+.||..... .............. ..+ .
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~~--~~~---~ 253 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDY--PSP---E 253 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC--CTT---G
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCC--Ccc---c
Confidence 2 34689999999999999999999999999999999999999975321 11122211111100 000 0
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
+. .....+.+++.+||+.||++|||+.|++++
T Consensus 254 ~~---~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 WD---TVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GG---GSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cc---CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01 112356788889999999999999998764
No 85
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.9e-40 Score=348.92 Aligned_cols=192 Identities=19% Similarity=0.304 Sum_probs=169.4
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhc----CCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS----QHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~----~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.. .+++.||||+++......+.+..|++++.++. +||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 36799999999999996 46889999999865444567888999999884 3999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC--------------------
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ-------------------- 475 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~-------------------- 475 (632)
+++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccccccc
Confidence 899999998653 23588999999999999999999998 9999999999999975
Q ss_pred -----CCCeEEcccCCCCCCCCC-CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCC
Q 006747 476 -----DLQGCISDFGLTPLMNTP-TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539 (632)
Q Consensus 476 -----~~~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~ 539 (632)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 889999999999865543 3446889999999999999999999999999999999999999754
No 86
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=345.23 Aligned_cols=240 Identities=18% Similarity=0.290 Sum_probs=194.1
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEV----VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||++... +++.||+|++... ....+.+.+|++++.++ +|||||++++++.+.+..++||||++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 467999999999999865 4789999999754 23456788999999999 99999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|..++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 99 GGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp TEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999854 2488999999999999999999998 9999999999999999999999999999876433
Q ss_pred -CCCCCCCcccCCccccC---CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 494 -TVPSRSAGYRAPEVIET---KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~---~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ........... .
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~---~~~~~~~~~~~-~--------- 237 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS---KEIVHTFETTV-V--------- 237 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH---HHHHHHHHHCC-C---------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH---HHHHHHHhhcc-c---------
Confidence 34468999999999974 4589999999999999999999999975433221 11111111110 0
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPT-MEEVVR 604 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-~~evl~ 604 (632)
.........+.+++.+||+.||++||+ ++++.+
T Consensus 238 --~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 --TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 000111235778888999999999999 666654
No 87
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=364.59 Aligned_cols=242 Identities=21% Similarity=0.351 Sum_probs=196.7
Q ss_pred HhCccceeEEEEEEEc---CCcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 343 VLGKGSYGTTYKAILE---EGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.||+|+||.||+|.+. ++..||||+++... ...+++.+|++++.++ +|||||+++++|.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999864 46679999998653 3467899999999999 99999999999976 5699999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC---
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT--- 494 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--- 494 (632)
+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 421 ~L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 421 PLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp BHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 9999997542 3589999999999999999999998 99999999999999999999999999998764322
Q ss_pred ----CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 495 ----VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 495 ----~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
...++..|+|||++.+..++.++|||||||++|||+| |+.||......+ ... .+..+...
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~-~i~~~~~~-------- 558 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMA-FIEQGKRM-------- 558 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHH-HHHTTCCC--------
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHH-HHHcCCCC--------
Confidence 1124578999999999999999999999999999998 999997643211 111 11121111
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhC
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 610 (632)
.........+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 559 --~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 559 --ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp --CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111122346778899999999999999999999999873
No 88
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=335.74 Aligned_cols=237 Identities=20% Similarity=0.312 Sum_probs=196.2
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||++... +|+.||+|++++.. ...+.+.+|+.++..+ +||||+++++++.+.+..++||||++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 367999999999999965 68999999997542 3456788899999999 99999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-C
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-T 494 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-~ 494 (632)
+|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 90 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 90 GGELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp SCBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999997643 478899999999999999999998 9999999999999999999999999999876543 3
Q ss_pred CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 495 VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
...+|+.|+|||.+.+..++.++|||||||++|||++|+.||.... .............. -....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~---------~p~~~ 226 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILNAELR---------FPPFF 226 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHCCCC---------CCTTS
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---------CCCCC
Confidence 3468999999999999999999999999999999999999996532 11222222221110 01111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRP-----TMEEVVR 604 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~ 604 (632)
..++.+++.+|++.||++|| +++|+++
T Consensus 227 ---~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 227 ---NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 23466788899999999999 8899885
No 89
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-39 Score=340.26 Aligned_cols=241 Identities=25% Similarity=0.390 Sum_probs=196.0
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC----HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG----KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEEecCC
Confidence 35799999999999985 57899999999754322 35688999999999 89999999999999999999999997
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTV 495 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~ 495 (632)
|+|.+++.... .++++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 138 -g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp -EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred -CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 68888875432 3589999999999999999999998 999999999999999999999999999988877666
Q ss_pred CCCCCcccCCcccc---CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 496 PSRSAGYRAPEVIE---TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 496 ~~~t~~y~aPE~~~---~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
..+|+.|+|||.+. ...++.++|||||||++|||+||+.||.... .............. . . ...
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~~~~~-~-----~-~~~ 276 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESP-A-----L-QSG 276 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC-C-----C-CCT
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhcCCC-C-----C-CCC
Confidence 78999999999984 5678999999999999999999999996432 11222222221111 0 0 011
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L 606 (632)
.. ...+.+++.+||+.||++|||+.+++++.
T Consensus 277 ~~---~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 277 HW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CC---CHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 11 23466788899999999999999998754
No 90
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.5e-40 Score=335.58 Aligned_cols=247 Identities=25% Similarity=0.403 Sum_probs=203.7
Q ss_pred HhHhCccceeEEEEEEEcC-CcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 341 AEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
.+.||+|+||.||+|.... +..||+|++.......+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 3579999999999999764 78999999987665667899999999999 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCCC----
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTV---- 495 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~---- 495 (632)
.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 99997642 34589999999999999999999999 999999999999999999999999999987654332
Q ss_pred -CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 496 -PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 496 -~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .... ........ ..
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~----~~~~~~~~----------~~ 233 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYE----LLEKDYRM----------ER 233 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH----HHHTTCCC----------CC
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHhccCCC----------CC
Confidence 124667999999998999999999999999999999 99998754321 1111 11111110 00
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.......+.+++.+||+.||++|||+.++++.|+.+..
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 11122457788889999999999999999999998744
No 91
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7e-40 Score=341.82 Aligned_cols=237 Identities=20% Similarity=0.325 Sum_probs=193.8
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEV----VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... +|+.||+|+++.. ......+..|.+++.++.+||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 367999999999999975 5889999999764 23456678889998887689999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC---
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT--- 492 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--- 492 (632)
+|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 102 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 102 GGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 999999997542 488999999999999999999998 999999999999999999999999999986432
Q ss_pred -CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 493 -PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 493 -~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+.... . .. .
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~-~------~~--p 238 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE------EELFHSIRMDN-P------FY--P 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCC-C------CC--C
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHhCC-C------CC--C
Confidence 2334689999999999999999999999999999999999999975321 11122221111 0 00 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTME-EVV 603 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~-evl 603 (632)
... ...+.+++.+||+.||++||++. ++.
T Consensus 239 ~~~---s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 RWL---EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TTS---CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ccc---CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111 23567788899999999999997 665
No 92
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.8e-40 Score=337.05 Aligned_cols=253 Identities=25% Similarity=0.385 Sum_probs=203.3
Q ss_pred HhHhCccceeEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 36799999999999984 3467899999975432 246789999999999789999999999999999999999
Q ss_pred cccCCCHhhhhccCCCC-------------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCe
Q 006747 413 FIEAGSFSALLHGNRGI-------------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG 479 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ 479 (632)
|+++|+|.+++...... ...++++..+..++.+++.||+|||+. +|+||||||+||++++++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCCCCE
Confidence 99999999999765321 123589999999999999999999998 99999999999999999999
Q ss_pred EEcccCCCCCCCCCCC------CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006747 480 CISDFGLTPLMNTPTV------PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552 (632)
Q Consensus 480 ki~DfGla~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 552 (632)
||+|||+++....... ..++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ...
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 258 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------KFY 258 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------HHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh------HHH
Confidence 9999999987654322 234667999999999999999999999999999999 999997543211 111
Q ss_pred HHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 553 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.......... .. ......+.+++.+||+.||++|||+.|++++|+++...
T Consensus 259 ~~~~~~~~~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 259 KMIKEGFRML-------SP---EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHTCCCC-------CC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhccCCCCC-------Cc---ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1122211100 00 11224577888999999999999999999999987543
No 93
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3e-40 Score=342.52 Aligned_cols=246 Identities=23% Similarity=0.361 Sum_probs=193.9
Q ss_pred HhHhCccceeEEEEEEEc-CCcE----EEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTT----VVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|... ++.. ||+|.+.... .....+.+|+.++.++ +||||+++++++. .+..++||||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEe
Confidence 367999999999999854 3444 7788775432 2235677899999999 8999999999885 5678999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+++|+|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 96 LPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp CTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999997642 3578889999999999999999998 9999999999999999999999999999876433
Q ss_pred C------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 494 T------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 494 ~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
. ...++.+|+|||.+.+..++.++|||||||++|||+| |+.||......+ ... .+....... .+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~~~~--~~ 239 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD----LLEKGERLA--QP 239 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH----HHHTTCBCC--CC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH----HHHcCCCCC--CC
Confidence 2 2236678999999999999999999999999999999 999997643221 111 111111000 00
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
. .....+.+++.+||+.||++|||+.+++++|+.+...
T Consensus 240 -----~---~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 240 -----Q---ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -----T---TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -----C---cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 0112466788899999999999999999999988643
No 94
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=347.98 Aligned_cols=242 Identities=19% Similarity=0.321 Sum_probs=194.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc---CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM---GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||++.. .+|+.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 46799999999999985 4689999999976532 245688999999999 999999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec---CCCCeEEcccCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS---QDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~---~~~~~ki~DfGla~~~~~~ 493 (632)
|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+++.....
T Consensus 95 g~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 95 GELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 99999987542 488999999999999999999998 999999999999998 4688999999999876543
Q ss_pred C----CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 494 T----VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 494 ~----~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
. ...||++|+|||++.+..++.++||||+||++|||++|+.||.+... ............ +....
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~-----~~~~~ 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------HRLYQQIKAGAY-----DFPSP 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCC-----CCCTT
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHhCCC-----CCCcc
Confidence 2 24689999999999999999999999999999999999999965321 111122111111 00000
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
..... ...+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~---s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDTV---TPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTTS---CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccC---CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11112 2356678889999999999999999873
No 95
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.4e-40 Score=335.98 Aligned_cols=252 Identities=22% Similarity=0.354 Sum_probs=191.6
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM---GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++ +
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 57999999999999998899999999965432 246788999999999 899999999999999999999999986 9
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----C
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----T 494 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~ 494 (632)
|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... .
T Consensus 86 l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 86 LKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp HHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred HHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 998887542 3488899999999999999999998 9999999999999999999999999998765422 2
Q ss_pred CCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc----cc----ccccc
Q 006747 495 VPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREE----WT----SEVFD 565 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~d 565 (632)
...+|+.|+|||.+.+. .++.++|||||||++|||+||+.||.+....+ ....+....... +. ...++
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD---QLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHHCCCChhhchhhhcccccc
Confidence 33578899999999764 58999999999999999999999997532111 111111111000 00 00001
Q ss_pred cccccc------CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 566 VELMRY------ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 566 ~~~~~~------~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
+..... .........+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111000 0001122456788899999999999999999863
No 96
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.4e-40 Score=339.05 Aligned_cols=250 Identities=25% Similarity=0.405 Sum_probs=200.9
Q ss_pred HhHhCccceeEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|.. .++..||||+++.... ..+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEEe
Confidence 36799999999999985 2357899999975432 236788999999999 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCCC-------------------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee
Q 006747 413 FIEAGSFSALLHGNRGI-------------------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL 473 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl 473 (632)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheEEE
Confidence 99999999999865321 123589999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccCCCCCCCCC------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006747 474 SQDLQGCISDFGLTPLMNTP------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVD 546 (632)
Q Consensus 474 ~~~~~~ki~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~ 546 (632)
++++.+||+|||+++..... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||.+.....
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 260 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 99999999999999765432 22245677999999998889999999999999999999 999997543211
Q ss_pred hhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 547 LPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
+. ..+....... ... .....+.+++.+||+.||++|||+.|++++|+++..
T Consensus 261 ~~----~~~~~~~~~~-------~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 261 LF----NLLKTGHRME-------RPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HH----HHHHTTCCCC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH----HHhhcCCcCC-------CCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11 1111111100 011 122457788899999999999999999999998743
No 97
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.3e-39 Score=329.78 Aligned_cols=246 Identities=28% Similarity=0.454 Sum_probs=201.5
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.+.||+|+||.||+|...++..||+|+++......+.+.+|++++.++ +||||+++++++. .+..++||||+++|+|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 357999999999999988888999999987766778899999999999 8999999999876 45689999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-----C
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-----V 495 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-----~ 495 (632)
+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...... .
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 9997532 12488999999999999999999998 99999999999999999999999999997664332 2
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ....... ....... ....
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~-~~~~~~~-------~~~~- 234 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNL-ERGYRMV-------RPDN- 234 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHH-HTTCCCC-------CCTT-
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH------HHHHHHH-hcccCCC-------Cccc-
Confidence 235678999999988889999999999999999999 9999865321 1111111 1111100 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
....+.+++.+||+.||++|||+.++++.|+++..
T Consensus 235 --~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 235 --CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp --CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 12357788889999999999999999999998743
No 98
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.7e-40 Score=339.17 Aligned_cols=262 Identities=20% Similarity=0.344 Sum_probs=189.5
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|... +|+.||+|+++... ...+.+.+|++++.++ +||||+++++++...+..++||||++ |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 468999999999999854 58999999997543 2346788999999999 89999999999999999999999998 5
Q ss_pred CHhhhhccCCC-CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 418 SFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 418 ~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
+|.+++..... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99998864321 1223588999999999999999999998 9999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---cccccc-----
Q 006747 494 -TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE---EWTSEV----- 563 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----- 563 (632)
....+|+.|+|||.+.+. .++.++|||||||++|||+||+.||.+....+ ....+...... ......
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhhhhhhh
Confidence 234578899999999764 58999999999999999999999997543211 11111111100 000000
Q ss_pred ccccccc--cCCcH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhhC
Q 006747 564 FDVELMR--YENIE---------EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDIR 610 (632)
Q Consensus 564 ~d~~~~~--~~~~~---------~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i~ 610 (632)
+.+.... ..... .....+.+++.+||+.||++|||+.|++++ +.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 301 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence 0000000 00000 112357788999999999999999999874 55543
No 99
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=339.11 Aligned_cols=241 Identities=19% Similarity=0.311 Sum_probs=181.4
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 57999999999999975 47899999997643 356688999999999 8999999999999999999999999999999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC---CCCeEEcccCCCCCCCCC---C
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---DLQGCISDFGLTPLMNTP---T 494 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~~---~ 494 (632)
+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++..... .
T Consensus 137 ~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 137 DRIVEK-----GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp HHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 999754 2488999999999999999999998 9999999999999975 899999999999876543 2
Q ss_pred CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCc
Q 006747 495 VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENI 574 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 574 (632)
...+|+.|+|||.+.+..++.++|||||||++|||++|+.||...... ............. ...+ ..
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~i~~~~~~--~~~~------~~ 275 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-----QFMFRRILNCEYY--FISP------WW 275 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-----HHHHHHHHTTCCC--CCTT------TT
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-----HHHHHHHHhCCCc--cCCc------hh
Confidence 345789999999999999999999999999999999999999653211 1111121111110 0000 00
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 575 EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 575 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.+....+.+++.+||+.||++|||+.|++++
T Consensus 276 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122356788889999999999999999873
No 100
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=9.8e-39 Score=326.10 Aligned_cols=254 Identities=16% Similarity=0.195 Sum_probs=198.0
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEE-EeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY-FSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~-~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||+|.. .+++.||||++.... ....+.+|++++.++ +|++++..++++ ...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 35799999999999995 678999999987543 234688999999999 676666555555 5667789999999 899
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee---cCCCCeEEcccCCCCCCCCC--
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~-- 493 (632)
|.+++.... .++++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999997432 3589999999999999999999998 99999999999999 58899999999999765432
Q ss_pred ---------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 494 ---------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 494 ---------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
....+|..|+|||.+.+..++.++|||||||++|||++|+.||......+.......+......... .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~-- 240 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E-- 240 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H--
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-H--
Confidence 2335788999999999999999999999999999999999999875443333222211111000000 0
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCC
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~ 614 (632)
.+ ... ....+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 241 --~~--~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 241 --VL--CKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp --HH--TTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HH--Hhh---CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 00 001 12357788899999999999999999999999865543
No 101
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.1e-39 Score=337.41 Aligned_cols=252 Identities=23% Similarity=0.383 Sum_probs=200.6
Q ss_pred HhHhCccceeEEEEEEE--------cCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEE
Q 006747 341 AEVLGKGSYGTTYKAIL--------EEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~--------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 410 (632)
.+.||+|+||.||+|.. .++..||+|+++.... ..+.+.+|++++.++.+||||+++++++...+..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 46799999999999986 3467899999976432 2456889999999997899999999999999999999
Q ss_pred EecccCCCHhhhhccCCCC-----------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCe
Q 006747 411 YDFIEAGSFSALLHGNRGI-----------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQG 479 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ 479 (632)
|||+++|+|.+++...... ....+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCCCCE
Confidence 9999999999999865421 123489999999999999999999998 99999999999999999999
Q ss_pred EEcccCCCCCCCCC------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006747 480 CISDFGLTPLMNTP------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQ 552 (632)
Q Consensus 480 ki~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 552 (632)
||+|||+++..... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||.+... .....
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~ 270 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EELFK 270 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHH
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH------HHHHH
Confidence 99999999765432 22245678999999988889999999999999999999 9999965321 11111
Q ss_pred HHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 553 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.+....... ........+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 271 -~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 271 -LLKEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp -HHHHTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHhcCCCCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111111110 0011223577888999999999999999999999998543
No 102
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-39 Score=339.38 Aligned_cols=254 Identities=22% Similarity=0.362 Sum_probs=199.1
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhh-cCCCCccceeEEEEeCC----ceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRL-SQHPNVVPIRAYYFSKD----EKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.. +++.||||++... ....+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 46899999999999988 4899999999754 356678888888773 28999999999998876 7899999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHH--------hccCCCceecCCCCCCeeecCCCCeEEcccCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH--------AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla 487 (632)
+|+|.+++... ++++..+..++.+++.||+||| +. +|+||||||+|||++.++.+||+|||++
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999753 4889999999999999999999 55 9999999999999999999999999999
Q ss_pred CCCCCC--------CCCCCCCcccCCccccCCC------CCccchhhHHHHHHHHHHhC----------CCCCCCCCCCC
Q 006747 488 PLMNTP--------TVPSRSAGYRAPEVIETKK------PTQKSDVYSFGVLLLEMLTG----------KAPIQAPGHED 543 (632)
Q Consensus 488 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~DV~s~Gvvl~elltg----------~~p~~~~~~~~ 543 (632)
+..... ....+|..|+|||.+.+.. ++.++|||||||++|||+|| +.||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 765432 2335888999999998763 33689999999999999999 67776533221
Q ss_pred CCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 544 VVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
. ....+......... .+.+.......+....+.+++.+||+.||++|||+.+|+++|+++.+.
T Consensus 275 ~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 275 P-SVEEMRKVVCEQKL-----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp C-CHHHHHHHHTTSCC-----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred c-cHHHHHHHHHHHHh-----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 1 12222222211111 111111111234566788999999999999999999999999998654
No 103
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.7e-40 Score=350.55 Aligned_cols=241 Identities=19% Similarity=0.277 Sum_probs=193.7
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||+||+|... +++.||+|++++.. .....+.+|++++..+ +|||||+++++|.+.+..++||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 357999999999999965 48899999997532 2234588899999999 99999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|.++++.. .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999999753 378888999999999999999998 9999999999999999999999999999776543
Q ss_pred ---CCCCCCCcccCCccccCCC----CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 494 ---TVPSRSAGYRAPEVIETKK----PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~~~~----~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+... ......+.......
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~----- 292 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHKNSL----- 292 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHHHC-----
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh------hhHHHHHHhccccc-----
Confidence 2456899999999998765 78999999999999999999999975321 11222222111000
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDM--RPTMEEVVRM 605 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPs~~evl~~ 605 (632)
......... ..+.+++.+||+.+|++ ||+++||+++
T Consensus 293 ~~p~~~~~s---~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 TFPDDNDIS---KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCTTCCCC---HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cCCCccccc---HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 000111122 34667888999999988 9999999875
No 104
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=341.54 Aligned_cols=255 Identities=15% Similarity=0.228 Sum_probs=190.3
Q ss_pred HhHhCccceeEEEEEEEc----CCcEEEEEEeccccc------------CHHHHHHHHHHHHhhcCCCCccceeEEEEe-
Q 006747 341 AEVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVM------------GKREFEQQMEVVGRLSQHPNVVPIRAYYFS- 403 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~- 403 (632)
.+.||+|+||.||+|... ++..||+|++..... ....+.+|+..+..+ +||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccc
Confidence 367999999999999975 578899999875421 123456777778888 89999999999988
Q ss_pred ---CCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC--C
Q 006747 404 ---KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL--Q 478 (632)
Q Consensus 404 ---~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~--~ 478 (632)
....++||||+ +++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 67889999999 999999998643 589999999999999999999998 999999999999999887 9
Q ss_pred eEEcccCCCCCCCCC-----------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 006747 479 GCISDFGLTPLMNTP-----------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547 (632)
Q Consensus 479 ~ki~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~ 547 (632)
+||+|||+++..... ....+|..|+|||.+.+..++.++|||||||++|||+||+.||........ .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--A 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--H
Confidence 999999999765321 223578899999999999999999999999999999999999964221111 0
Q ss_pred hHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 548 PRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 548 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.............. .+............+.+++.+||+.||++|||+.+|++.|+++...
T Consensus 270 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 270 VQTAKTNLLDELPQ-----SVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp HHHHHHHHHHTTTH-----HHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred HHHHHHhhcccccH-----HHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 11111111111100 0000000001223577888899999999999999999999987553
No 105
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=333.85 Aligned_cols=255 Identities=20% Similarity=0.289 Sum_probs=192.5
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc------CHHHHHHHHHHHHhhc--CCCCccceeEEEEeCC-----c
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM------GKREFEQQMEVVGRLS--QHPNVVPIRAYYFSKD-----E 406 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~-----~ 406 (632)
.+.||+|+||.||+|.. .+++.||||++..... ....+.+|++++.++. +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 35799999999999995 5689999999974321 1356778888877763 4999999999998765 4
Q ss_pred eEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCC
Q 006747 407 KLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL 486 (632)
Q Consensus 407 ~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 486 (632)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 799999997 59999998653 23489999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh----hcc
Q 006747 487 TPLMNTPTV---PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVR----EEW 559 (632)
Q Consensus 487 a~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~~~ 559 (632)
++....... ..+|+.|+|||.+.+..++.++|||||||++|||++|+.||.+....+ ....+..... +.+
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~ 243 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPEDDW 243 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHHHHCCCCTTTS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChhhc
Confidence 987654322 357889999999999999999999999999999999999997543211 1111111110 011
Q ss_pred ccccccc--cccc--cCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 560 TSEVFDV--ELMR--YENI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 560 ~~~~~d~--~~~~--~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
......+ .... .... .+....+.+++.+||+.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 244 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 1000000 0000 0000 0122456788899999999999999999863
No 106
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.9e-40 Score=336.95 Aligned_cols=249 Identities=20% Similarity=0.274 Sum_probs=192.0
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
+.||+|+||.||+|.. .+++.||||++.... .....+.+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 4699999999999984 468999999997653 34677999999999966899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC---eEEcccCCCCCCCCC---
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ---GCISDFGLTPLMNTP--- 493 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~~~~~~--- 493 (632)
.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 99 ~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKRR-----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 99997642 488899999999999999999998 9999999999999998776 999999998765321
Q ss_pred --------CCCCCCCcccCCccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCC-----h---hHHHH
Q 006747 494 --------TVPSRSAGYRAPEVIET-----KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD-----L---PRWVQ 552 (632)
Q Consensus 494 --------~~~~~t~~y~aPE~~~~-----~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~-----~---~~~~~ 552 (632)
....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||......+... . .....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 12247889999999875 457899999999999999999999998654332110 0 00011
Q ss_pred HHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 553 SVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 553 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
..+...... .... .... ....+.+++.+||+.||++|||+.|++++
T Consensus 251 ~~i~~~~~~-~~~~---~~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKYE-FPDK---DWAH---ISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCCC-CCHH---HHTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCcc-cCch---hccc---CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111111100 0000 0001 12357788899999999999999999884
No 107
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.4e-39 Score=330.10 Aligned_cols=244 Identities=22% Similarity=0.360 Sum_probs=187.7
Q ss_pred HhHhCccceeEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILEE----GTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|.... +..||+|+++.... ..+.+.+|++++.++ +||||+++++++ ..+..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEE-ccCccEEEEecC
Confidence 3679999999999998643 45799999875432 245688999999999 899999999997 456789999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT 494 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 494 (632)
++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999997542 3588999999999999999999998 99999999999999999999999999998765432
Q ss_pred -----CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 495 -----VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 495 -----~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
...+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+ .. .... ......
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~---~~i~-~~~~~~------ 237 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VI---GRIE-NGERLP------ 237 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH---HHHH-TTCCCC------
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HH---HHHH-cCCCCC------
Confidence 2235678999999998899999999999999999997 999997543221 11 1111 111000
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhC
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 610 (632)
... .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 238 -~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 238 -MPP---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp -CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 001 12245678888999999999999999999999874
No 108
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.2e-39 Score=366.48 Aligned_cols=241 Identities=25% Similarity=0.348 Sum_probs=195.1
Q ss_pred hHhCccceeEEEEEEEc---CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 342 EVLGKGSYGTTYKAILE---EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
+.||+|+||.||+|.+. .++.||||+++..... .+++.+|++++.++ +|||||+++++|. .+..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 46999999999999753 4578999999865332 57899999999999 8999999999996 456899999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT- 494 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~- 494 (632)
+|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 453 ~g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 453 LGPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp TEEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 999999997542 488999999999999999999998 99999999999999999999999999997654322
Q ss_pred ------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcccccccccc
Q 006747 495 ------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567 (632)
Q Consensus 495 ------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 567 (632)
...+|..|+|||++.+..++.++|||||||++|||+| |+.||.+.... .+...+..+....
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~~~~~----- 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKGERMG----- 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTCCCC-----
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC-----
Confidence 1235677999999999999999999999999999999 99999754321 1111222211110
Q ss_pred ccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhh
Q 006747 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609 (632)
Q Consensus 568 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 609 (632)
........+.+++.+||+.||++|||+.+|++.|+++
T Consensus 593 -----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 593 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1111234577888999999999999999999999976
No 109
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.4e-39 Score=337.77 Aligned_cols=239 Identities=22% Similarity=0.281 Sum_probs=194.5
Q ss_pred HhHhCccceeEEEEEEEcC-CcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.... ++.||+|+++... ...+.+..|.+++..+.+||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 3679999999999999754 7899999997642 3456688899999887789999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC---
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT--- 492 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--- 492 (632)
+|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 105 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 999999997542 488899999999999999999998 999999999999999999999999999986432
Q ss_pred -CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 493 -PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 493 -~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. .......+...... -.
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~---------~p 241 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHNVA---------YP 241 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------CC
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHHhCCCC---------CC
Confidence 233468999999999999999999999999999999999999997532 11222222221110 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPT-----MEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~evl~~ 605 (632)
.. ...++.+++.+||+.||++||+ ++|++++
T Consensus 242 ~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 KS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp TT---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CC---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11 1235677888999999999995 5777653
No 110
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-40 Score=345.26 Aligned_cols=247 Identities=24% Similarity=0.425 Sum_probs=189.1
Q ss_pred HhHhCccceeEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEe-CCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILEE----GTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFS-KDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|...+ +..||||.++.... ..+.+.+|++++.++ +||||++++++|.. .+..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEEEC
Confidence 3579999999999998542 24689999875432 246789999999999 89999999999765 4578999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 173 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999997542 3478899999999999999999998 9999999999999999999999999999865332
Q ss_pred C--------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 494 T--------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 494 ~--------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
. ...++..|+|||.+.+..++.++|||||||++|||+| |..||......+ ....+ ..+.. ..
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~----~~~~~--~~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL----LQGRR--LL 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH----HTTCC--CC
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH----HcCCC--CC
Confidence 1 1235667999999999999999999999999999999 677776543222 11111 11110 00
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.... ....+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 317 -----~p~~---~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 317 -----QPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp -----CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----CCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0111 123577888999999999999999999999998654
No 111
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5e-39 Score=341.82 Aligned_cols=261 Identities=22% Similarity=0.320 Sum_probs=196.9
Q ss_pred HhHhCcc--ceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKG--SYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G--~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+| +||.||+|... +++.||||+++..... .+.+.+|++++.++ +|||||++++++.+.+..++||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEEEcc
Confidence 3679999 99999999975 6899999999865433 35678899999999 8999999999999999999999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC---
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN--- 491 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~--- 491 (632)
++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 109 AYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999997642 23488999999999999999999998 99999999999999999999999999875431
Q ss_pred --------CCCCCCCCCcccCCccccC--CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----
Q 006747 492 --------TPTVPSRSAGYRAPEVIET--KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE---- 557 (632)
Q Consensus 492 --------~~~~~~~t~~y~aPE~~~~--~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 557 (632)
......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+.. ..........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCLLDT 260 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC-----------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCccccc
Confidence 1122357888999999987 57899999999999999999999999764332211 0000000000
Q ss_pred -----c-------------ccccccccc--------ccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhh
Q 006747 558 -----E-------------WTSEVFDVE--------LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDI 609 (632)
Q Consensus 558 -----~-------------~~~~~~d~~--------~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i 609 (632)
. ...+..... .............+.+|+.+||+.||++|||+.|++++ ++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 0 000000000 00000011123457889999999999999999999975 5555
Q ss_pred C
Q 006747 610 R 610 (632)
Q Consensus 610 ~ 610 (632)
.
T Consensus 341 ~ 341 (389)
T 3gni_B 341 K 341 (389)
T ss_dssp -
T ss_pred h
Confidence 4
No 112
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.1e-39 Score=337.95 Aligned_cols=236 Identities=17% Similarity=0.220 Sum_probs=195.6
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||++... +|+.||+|+++... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 57999999999999965 68999999997542 3456788999999999 999999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-C
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-V 495 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-~ 495 (632)
|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 126 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~ 197 (350)
T 1rdq_E 126 GEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 197 (350)
T ss_dssp CBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCccc
Confidence 99999997542 488899999999999999999998 99999999999999999999999999998765432 3
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcH
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 575 (632)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ . . -...
T Consensus 198 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~-~------~--~p~~-- 260 (350)
T 1rdq_E 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVSGK-V------R--FPSH-- 260 (350)
T ss_dssp CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCC-C------C--CCTT--
T ss_pred ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHHcCC-C------C--CCCC--
Confidence 458999999999999999999999999999999999999997532 111222222111 1 0 0011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006747 576 EEMVQMLQIAMSCVAKVPDMRPT-----MEEVVR 604 (632)
Q Consensus 576 ~~~~~~~~l~~~Cl~~~P~~RPs-----~~evl~ 604 (632)
....+.+++.+||+.||++||+ ++|+++
T Consensus 261 -~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 -FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1235678888999999999998 888876
No 113
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.6e-39 Score=333.05 Aligned_cols=252 Identities=23% Similarity=0.327 Sum_probs=196.5
Q ss_pred HhHhCccceeEEEEEEE-----cCCcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeC--CceEEEE
Q 006747 341 AEVLGKGSYGTTYKAIL-----EEGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSK--DEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-----~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~ 411 (632)
.+.||+|+||.||+|.+ .+++.||+|+++... ...+.+.+|++++.++ +||||+++++++... ...++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEE
Confidence 36799999999999983 468899999997543 3357799999999999 899999999999876 6689999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 105 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp ECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999996542 3488999999999999999999998 99999999999999999999999999997765
Q ss_pred CCC-------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCC--------CCCCChhHHHHHHhh
Q 006747 492 TPT-------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGH--------EDVVDLPRWVQSVVR 556 (632)
Q Consensus 492 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~--------~~~~~~~~~~~~~~~ 556 (632)
... ...+|..|+|||.+.+..++.++|||||||++|||+||+.|+..... ...............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 432 23467779999999998899999999999999999999998643210 000000011111111
Q ss_pred hccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhC
Q 006747 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610 (632)
Q Consensus 557 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 610 (632)
.... ..........+.+++.+||+.||++|||+.++++.|+++.
T Consensus 258 ~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGKR----------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCC----------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1110 0011112245778889999999999999999999999864
No 114
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=7.7e-40 Score=338.34 Aligned_cols=252 Identities=22% Similarity=0.351 Sum_probs=198.7
Q ss_pred HhHhCccceeEEEEEEEc-----CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeC--CceEEEE
Q 006747 341 AEVLGKGSYGTTYKAILE-----EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSK--DEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~ 411 (632)
.+.||+|+||.||++.+. +++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEE
Confidence 367999999999998642 588999999986532 245689999999999 899999999999884 5689999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+++|+|.+++... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999754 388999999999999999999998 99999999999999999999999999998765
Q ss_pred CCC-------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCC-----CC-Ch--hHHHHHHhh
Q 006747 492 TPT-------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHED-----VV-DL--PRWVQSVVR 556 (632)
Q Consensus 492 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~-----~~-~~--~~~~~~~~~ 556 (632)
... ...++..|+|||.+.+..++.++|||||||++|||+||+.||....... .. .. .........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 432 2346777999999998889999999999999999999999986421100 00 00 000011111
Q ss_pred hccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 557 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
... ...........+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 266 ~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 266 RGE----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccc----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 110 0011112234677888999999999999999999999988654
No 115
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=339.87 Aligned_cols=244 Identities=15% Similarity=0.187 Sum_probs=195.8
Q ss_pred hHhCccceeEEEEEE------EcCCcEEEEEEecccccCHHHHHHHHHHHHhhc--CCCCccceeEEEEeCCceEEEEec
Q 006747 342 EVLGKGSYGTTYKAI------LEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS--QHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
+.||+|+||.||+|. ..+++.||||+++.. ...++..|++++.++. .|+||+++++++...+..++||||
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~ 148 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGEL 148 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECC
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEec
Confidence 579999999999993 556899999999753 4567888888888873 289999999999999999999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC-----------CCCeEEc
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ-----------DLQGCIS 482 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~-----------~~~~ki~ 482 (632)
+++|+|.+++...+......++|..+..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+
T Consensus 149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~ 225 (365)
T 3e7e_A 149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI 225 (365)
T ss_dssp CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCCEEEe
Confidence 9999999999754333345699999999999999999999998 9999999999999998 8999999
Q ss_pred ccCCCCCCC---C---CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh
Q 006747 483 DFGLTPLMN---T---PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVR 556 (632)
Q Consensus 483 DfGla~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 556 (632)
|||+++.+. . .....||.+|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 226 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------------ 293 (365)
T 3e7e_A 226 DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------------ 293 (365)
T ss_dssp CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE------------
T ss_pred eCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce------------
Confidence 999996543 1 1334589999999999999999999999999999999999999864321110
Q ss_pred hccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhhhCCC
Q 006747 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMR-PTMEEVVRMIEDIRPS 612 (632)
Q Consensus 557 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R-Ps~~evl~~L~~i~~~ 612 (632)
. ........ ... ..+.+++..|++.+|.+| |+++++.+.|+++.+.
T Consensus 294 ---~---~~~~~~~~-~~~---~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 ---K---PEGLFRRL-PHL---DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ---E---ECSCCTTC-SSH---HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---e---echhcccc-CcH---HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0 00011111 112 245567779999999988 7888888888877543
No 116
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=342.17 Aligned_cols=243 Identities=21% Similarity=0.402 Sum_probs=196.4
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.++ +||||+++++++.+....++||||+++|+
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 367999999999999864 58899999997543 2345789999999999 89999999999999999999999999999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC--CCCeEEcccCCCCCCCCCC--
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ--DLQGCISDFGLTPLMNTPT-- 494 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~--~~~~ki~DfGla~~~~~~~-- 494 (632)
|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 135 L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 135 LFDRIAAED----YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999987542 3589999999999999999999998 9999999999999974 5789999999998765432
Q ss_pred -CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 495 -VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 495 -~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
...+|+.|+|||++.+..++.++|||||||++|||+||+.||.+... ...........+. ++.. .
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~i~~~~~~---~~~~-----~ 273 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVKRCDWE---FDED-----A 273 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHCCCC---CCSS-----T
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC---CCcc-----c
Confidence 23588999999999999999999999999999999999999975321 1112222111111 0100 0
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.......+.+++.+||+.||++|||+.|++++
T Consensus 274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 01112356788889999999999999999874
No 117
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4e-39 Score=328.21 Aligned_cols=248 Identities=27% Similarity=0.423 Sum_probs=188.7
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|... ..||+|+++..... .+.+.+|++++.++ +||||+++++++ .....++||||++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 367999999999999864 46999999765433 35689999999999 899999999965 556789999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 105 SLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999997542 3589999999999999999999998 9999999999999999999999999999765431
Q ss_pred --CCCCCCCcccCCcccc---CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIE---TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~---~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
....+|..|+|||.+. +..++.++|||||||++|||++|+.||...... ..+........... ..
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~----~~ 247 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIEMVGRGSLSP----DL 247 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH------HHHHHHHHHTSCCC----CT
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH------HHHHHHhcccccCc----ch
Confidence 1234788999999986 566888999999999999999999999753321 11111221211111 00
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.. ........+.+++.+||+.||++|||+.++++.|+++..
T Consensus 248 ~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SK--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TS--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hh--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 011123467788899999999999999999999999864
No 118
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.6e-39 Score=333.85 Aligned_cols=237 Identities=18% Similarity=0.308 Sum_probs=186.3
Q ss_pred HhHhCccceeEEEEEEE----cCCcEEEEEEecccc-----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEE
Q 006747 341 AEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVV-----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 411 (632)
.+.||+|+||.||++.. .+++.||+|+++... .....+.+|++++.++ +||||+++++++...+..++||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEE
Confidence 36799999999999986 478999999997642 1234578899999999 8999999999999999999999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 101 EYLSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp ECCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred eCCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999997542 478889999999999999999998 99999999999999999999999999997643
Q ss_pred CC----CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccc
Q 006747 492 TP----TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVE 567 (632)
Q Consensus 492 ~~----~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 567 (632)
.. ....+|+.|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~-------~ 239 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR------KKTIDKILKCKL-------N 239 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCC-------C
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCC-------C
Confidence 22 234588999999999999999999999999999999999999975321 112222221110 0
Q ss_pred ccccCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006747 568 LMRYENIEEEMVQMLQIAMSCVAKVPDMRP-----TMEEVVR 604 (632)
Q Consensus 568 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~ 604 (632)
.... ....+.+++.+||+.||++|| ++.|+++
T Consensus 240 --~p~~---~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 240 --LPPY---LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --CCTT---SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --CCCC---CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 0011 123567788899999999999 7788876
No 119
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.7e-39 Score=328.16 Aligned_cols=253 Identities=19% Similarity=0.283 Sum_probs=189.9
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
+.||+|+||+||+|... +++.||+|+++..... ...+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 57999999999999964 5889999999754332 36788999999999 899999999999999999999999986
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
++.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 86 DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 5555554322 3588999999999999999999998 9999999999999999999999999999766432
Q ss_pred CCCCCCCcccCCccccCCC-CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---cccccccc----
Q 006747 494 TVPSRSAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE---EWTSEVFD---- 565 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~-~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d---- 565 (632)
....+|..|+|||.+.+.. ++.++|||||||++|||+||+.||..... .......+...... .......+
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence 2345788999999998766 79999999999999999999888643211 11111111111100 00000000
Q ss_pred -------ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 566 -------VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 566 -------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
...............+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000011123456788899999999999999999863
No 120
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-39 Score=327.97 Aligned_cols=245 Identities=21% Similarity=0.334 Sum_probs=198.2
Q ss_pred hHhCccceeEEEEEEEc---CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILE---EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||+|... ++..||+|+++.... ..+.+.+|++++.++ +||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 37999999999999853 578899999986432 346789999999999 899999999999 55679999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 94 ~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 94 GPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CCHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999997532 3589999999999999999999998 9999999999999999999999999999766432
Q ss_pred ----CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 494 ----TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 494 ----~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
....+|..|+|||.+.+..++.++|||||||++|||+| |+.||...... ..... +......
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~-i~~~~~~------- 232 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAF-IEQGKRM------- 232 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH------HHHHH-HHTTCCC-------
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH------HHHHH-HhcCCcC-------
Confidence 12235778999999988889999999999999999999 99999754321 11111 1111110
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.........+.+++.+||+.||++|||+.+++++|+++..+
T Consensus 233 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 233 ---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 00111224577888999999999999999999999988444
No 121
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1e-38 Score=325.91 Aligned_cols=254 Identities=16% Similarity=0.194 Sum_probs=196.6
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEE-EeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYY-FSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~-~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||+|.. .+++.||||++..... ...+.+|++++.++ +|++++..++++ ...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 36799999999999995 5688999998765422 23588899999999 666666655555 5677889999999 999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee---cCCCCeEEcccCCCCCCCCC--
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~-- 493 (632)
|.+++.... .++++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999997532 2489999999999999999999998 99999999999999 78999999999999765432
Q ss_pred ---------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 494 ---------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 494 ---------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
....+|..|+|||.+.+..++.++|||||||++|||++|+.||........................ ..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~- 241 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-EV- 241 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-HH-
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-hh-
Confidence 1235788999999999999999999999999999999999999875544433322211111100000 00
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCC
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~ 614 (632)
.... ....+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 242 -----~~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 242 -----LCKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -----HTTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -----hhcc---CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0001 12357788899999999999999999999999865543
No 122
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.8e-39 Score=354.59 Aligned_cols=243 Identities=23% Similarity=0.325 Sum_probs=197.9
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEV----VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||+|... +|+.||+|++... ......+.+|++++.++ +|||||++++++.+.+..++||||+++
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 57999999999999964 6899999999754 23456788999999999 899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 269 g~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~ 342 (576)
T 2acx_A 269 GDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342 (576)
T ss_dssp CBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred CcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence 99999997643 33588999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 494 TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...+..... .. ...
T Consensus 343 ~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~---~~~i~~~i~~~~~------~~--p~~ 411 (576)
T 2acx_A 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---REEVERLVKEVPE------EY--SER 411 (576)
T ss_dssp ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC---HHHHHHHHHHCCC------CC--CTT
T ss_pred cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh---HHHHHHHhhcccc------cC--Ccc
Confidence 234689999999999998899999999999999999999999976432211 1111111111100 00 011
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRP-----TMEEVVRM 605 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~~ 605 (632)
....+.+++.+||+.||++|| +++|++++
T Consensus 412 ---~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 412 ---FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 123567788899999999999 78888763
No 123
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-39 Score=334.04 Aligned_cols=246 Identities=21% Similarity=0.431 Sum_probs=194.0
Q ss_pred hHhCccceeEEEEEEEcC-----CcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 342 EVLGKGSYGTTYKAILEE-----GTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~-----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
+.||+|+||.||+|.... +..||||+++.... ....+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEeCC
Confidence 679999999999998643 23599999975432 245688999999999 8999999999999999999999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT 494 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 494 (632)
++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 129 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 129 ENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp TTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 9999999997542 3588999999999999999999998 99999999999999999999999999998764321
Q ss_pred -------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 495 -------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 495 -------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
...++..|+|||.+.+..++.++|||||||++|||++ |+.||..... ...... +.+.....
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~-~~~~~~~~---- 270 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HEVMKA-INDGFRLP---- 270 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHH-HHTTCCCC----
T ss_pred ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH------HHHHHH-HHCCCcCC----
Confidence 1124667999999999999999999999999999999 9999965321 111111 11111100
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.. ......+.+++.+||+.||++||++.++++.|+++...
T Consensus 271 ---~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 271 ---TP---MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ---CC---TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---Cc---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01 11223577888999999999999999999999987543
No 124
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.5e-40 Score=347.30 Aligned_cols=190 Identities=27% Similarity=0.433 Sum_probs=154.7
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCC--ceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKD--EKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~E~~ 414 (632)
.+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.++.++.+||||+++++++...+ ..|+||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 35799999999999985 46899999999754332 3557789999999955999999999998654 689999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC--
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT-- 492 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~-- 492 (632)
+ |+|..++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 8 5999998753 478899999999999999999998 999999999999999999999999999976432
Q ss_pred -----------------------CCCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCC
Q 006747 493 -----------------------PTVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPG 540 (632)
Q Consensus 493 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~ 540 (632)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112357889999999987 568999999999999999999999997643
No 125
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=342.41 Aligned_cols=264 Identities=17% Similarity=0.234 Sum_probs=205.7
Q ss_pred HhHhCccceeEEEEEEEcC-CcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCC--ceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD--EKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.... ++.||||+++... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 3579999999999999654 8999999997643 3457788999999999 8999999999998765 6799999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee----cCCCCeEEcccCCCCCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL----SQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl----~~~~~~ki~DfGla~~~~ 491 (632)
+|+|.+++..... ...+++..+..++.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp TEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999986532 23489999999999999999999998 99999999999999 788889999999998765
Q ss_pred CCC---CCCCCCcccCCccccC--------CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 492 TPT---VPSRSAGYRAPEVIET--------KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 492 ~~~---~~~~t~~y~aPE~~~~--------~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
... ...+|..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ....+.........
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSCCT
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCCCc
Confidence 432 3458889999999865 4578899999999999999999999975432221 12222222221110
Q ss_pred ---ccc---------ccccccc-cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 561 ---SEV---------FDVELMR-YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 561 ---~~~---------~d~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
... +...+.. ..........+.+++.+||+.||++|||+.|+++.++++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 000 0001111 112244556678899999999999999999999999988654
No 126
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=333.28 Aligned_cols=240 Identities=19% Similarity=0.301 Sum_probs=188.2
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCC-CCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQH-PNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||++...+++.||||++...... .+.+.+|++++.++.+| +||+++++++.+.+..++|||| .+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CC
Confidence 3679999999999999888999999999765433 35688999999999432 9999999999999999999995 67
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC--
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-- 494 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-- 494 (632)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 93 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp EEHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 89999998642 488999999999999999999998 999999999999997 6789999999998765332
Q ss_pred ----CCCCCCcccCCccccC-----------CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006747 495 ----VPSRSAGYRAPEVIET-----------KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559 (632)
Q Consensus 495 ----~~~~t~~y~aPE~~~~-----------~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (632)
...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..............
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 238 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTS
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcCCc
Confidence 3358999999999864 668999999999999999999999996432 11111222211111
Q ss_pred ccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 560 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
... ..... ...+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~-------~~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 239 EIE-------FPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCC-------CCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccC-------CcccC---CHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 100 00111 1356788889999999999999999875
No 127
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.1e-38 Score=338.84 Aligned_cols=240 Identities=18% Similarity=0.295 Sum_probs=189.8
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcC-CCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQ-HPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||++...+++.||||++...... .+.+.+|++++.++.+ |+||+++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 3679999999999999888999999999755333 3568999999999953 6999999999999999999999 567
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 140 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 140 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 89999998643 578889999999999999999998 999999999999995 589999999999876532
Q ss_pred ---CCCCCCCcccCCccccC-----------CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006747 494 ---TVPSRSAGYRAPEVIET-----------KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (632)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..............
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 285 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCTTS
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCccc
Confidence 23358999999999865 368999999999999999999999996432 11112222221111
Q ss_pred ccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 560 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.. .. .... ...+.+++.+||+.||++|||+.|++++
T Consensus 286 ~~-----~~--~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 286 EI-----EF--PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CC-----CC--CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cC-----CC--Cccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 10 00 0111 2356788889999999999999999874
No 128
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.4e-39 Score=325.33 Aligned_cols=244 Identities=24% Similarity=0.405 Sum_probs=196.6
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEe----------------
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS---------------- 403 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~---------------- 403 (632)
.+.||+|+||.||+|... +++.||+|+++... ..+.+|++++.++ +||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhC-CCCCEEEEeeeEeccccCcccccccccccC
Confidence 467999999999999975 78999999997542 4577899999999 89999999999864
Q ss_pred CCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcc
Q 006747 404 KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISD 483 (632)
Q Consensus 404 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~D 483 (632)
....++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECc
Confidence 345799999999999999997542 23588999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 484 FGLTPLMNTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 484 fGla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
||+++..... ....+++.|+|||.+.+..++.++||||||+++|||++|..|+... ...... ......
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~-~~~~~~ 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTD-LRDGII 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHH-HHTTCC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHH-hhcccc
Confidence 9998766543 2345888999999999999999999999999999999999886421 111111 111111
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCCCC
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~~ 616 (632)
. ... ...+.+++.+||+.||++|||+.|++++|+.+......+
T Consensus 237 ~----------~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 237 S----------DIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp C----------TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred c----------ccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 1 111 124667888999999999999999999999998765443
No 129
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.4e-39 Score=330.62 Aligned_cols=255 Identities=20% Similarity=0.358 Sum_probs=193.4
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc----CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM----GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.. .+|+.||+|+++.... ....+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 36799999999999985 5689999999975321 245688999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT- 494 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~- 494 (632)
+|+|.+++..... ....+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999864321 124588999999999999999999998 99999999999999999999999999997764432
Q ss_pred ---CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 495 ---VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 495 ---~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
...++..|+|||.+.+..++.++||||||+++|||++|+.||.+... .......... ....... ..
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~-~~~~~~~------~~ 260 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIE-QCDYPPL------PS 260 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHH-TTCSCCC------CT
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhh-cccCCCC------cc
Confidence 23478889999999999999999999999999999999999965321 1122222211 1111100 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCC
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~ 614 (632)
.. ....+.+++.+||+.||++|||+.++++.|+++.+...
T Consensus 261 ~~---~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 261 DH---YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred cc---cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 11 12357788889999999999999999999999976643
No 130
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=8.2e-40 Score=339.46 Aligned_cols=255 Identities=22% Similarity=0.347 Sum_probs=198.3
Q ss_pred HhHhCccceeEEEEEEE-----cCCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEe--CCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAIL-----EEGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFS--KDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~E 412 (632)
.+.||+|+||.||++.+ .++..||||++..... ..+.+.+|++++.++ +||||+++++++.. ....++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEe
Confidence 36799999999999984 4588999999976532 245689999999999 99999999999874 456899999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 492 (632)
|+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 107 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred ecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999997642 2589999999999999999999998 999999999999999999999999999986643
Q ss_pred CC-------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCC--------CCCChhHHHHHHhhh
Q 006747 493 PT-------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE--------DVVDLPRWVQSVVRE 557 (632)
Q Consensus 493 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~--------~~~~~~~~~~~~~~~ 557 (632)
.. ...++..|+|||.+.+..++.++|||||||++|||++|+.||...... ...............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22 234677799999999888999999999999999999999998642210 000000111111111
Q ss_pred ccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 558 EWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 558 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
... ..........+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 260 ~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 260 GQR----------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp TCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred ccC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 110 0111122345778889999999999999999999999986553
No 131
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=326.33 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=195.5
Q ss_pred HhHhCccceeEEEEEEEcC-C---cEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCce-EEEEec
Q 006747 341 AEVLGKGSYGTTYKAILEE-G---TTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEK-LLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~---~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~-~lv~E~ 413 (632)
.+.||+|+||.||+|...+ + ..||+|.+..... ..+.+.+|++++.++ +||||+++++++.+.+.. ++||||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEec
Confidence 3679999999999998533 2 2799999975432 246788999999999 899999999999877665 999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+.+|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 105 ~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 105 MCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999997632 3578999999999999999999998 9999999999999999999999999999765332
Q ss_pred --------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 494 --------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 494 --------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
....++..|+|||.+.+..++.++|||||||++|||+||..|+..... ....... ........
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~~----~~~~~~~~--- 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTHF----LAQGRRLP--- 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHHH----HHTTCCCC---
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHHH----hhcCCCCC---
Confidence 223467789999999999999999999999999999996666543211 1111111 11111000
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.... ....+.+++.+||+.||++|||+.++++.|+++...
T Consensus 249 ----~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 249 ----QPEY---CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp ----CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCcc---chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0111 123577888999999999999999999999988544
No 132
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.6e-39 Score=347.41 Aligned_cols=244 Identities=17% Similarity=0.263 Sum_probs=193.3
Q ss_pred HhHhCccceeEEEEEEEcC-CcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.++||+|+||+||+|...+ ++.||+|++++.. .....+.+|++++..+ +||||++++++|.+.+..++||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 3679999999999999764 7899999997532 1233488899999998 99999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 158 gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 158 GGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999997632 3488999999999999999999998 9999999999999999999999999999765432
Q ss_pred ---CCCCCCCcccCCcccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 494 ---TVPSRSAGYRAPEVIE-----TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~-----~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
....||+.|+|||++. ...++.++|||||||++|||++|+.||.+... ......+........ +
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~~~-~- 302 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKERFQ-F- 302 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHHHCC-C-
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh------hHHHHhhhhcccccc-C-
Confidence 2246899999999997 45689999999999999999999999975321 111222211110000 0
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDM--RPTMEEVVRM 605 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPs~~evl~~ 605 (632)
+. ..... ...+.+++.+|+..+|++ ||+++|++++
T Consensus 303 p~--~~~~~---s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 PT--QVTDV---SENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CS--SCCCS---CHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred Cc--ccccC---CHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00 00111 234667788999888888 9999999874
No 133
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=335.21 Aligned_cols=246 Identities=22% Similarity=0.365 Sum_probs=191.7
Q ss_pred HhHhCccceeEEEEEEEc-CCcE----EEEEEeccc--ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTT----VVVKRLKEV--VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~----vavK~~~~~--~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|... +++. ||+|.+... ....+.+.+|++++.++ +||||+++++++.... .++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC-ceEEEEe
Confidence 367999999999999853 4444 577777543 23467899999999999 8999999999998754 8899999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999997643 3588999999999999999999998 9999999999999999999999999999876432
Q ss_pred C------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 494 T------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 494 ~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
. ...+|..|+|||.+.+..++.++|||||||++|||++ |+.||......+ +. ..+......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~----~~~~~~~~~----- 238 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEKGERL----- 238 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHTTCCC-----
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH----HHHHcCCCC-----
Confidence 2 1235667999999999999999999999999999999 999997543221 11 111111100
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 239 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 -----PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 00111223577888999999999999999999999987643
No 134
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=338.84 Aligned_cols=250 Identities=23% Similarity=0.371 Sum_probs=182.3
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEe--------CCceEEE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFS--------KDEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--------~~~~~lv 410 (632)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++.++.+||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 36799999999999995 4689999999865432 346788999999999569999999999953 2347999
Q ss_pred EecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK--FILGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
|||+. |+|.+++.... ...++++..+..++.+++.||+|||+. + |+||||||+|||+++++.+||+|||+++
T Consensus 113 ~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 99996 69999886532 123589999999999999999999998 6 9999999999999999999999999998
Q ss_pred CCCCCC----------------CCCCCCcccCCccc---cCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhH
Q 006747 489 LMNTPT----------------VPSRSAGYRAPEVI---ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPR 549 (632)
Q Consensus 489 ~~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~ 549 (632)
...... ...+|+.|+|||.+ .+..++.++|||||||++|||+||+.||........
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----- 261 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI----- 261 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-----
Confidence 765321 22378889999998 566789999999999999999999999965322111
Q ss_pred HHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCCCC
Q 006747 550 WVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN 616 (632)
Q Consensus 550 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~~ 616 (632)
........ .... ....+.+++.+||+.||++|||+.|++++|+.+......+
T Consensus 262 -----~~~~~~~~-------~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 262 -----VNGKYSIP-------PHDT---QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp ---------CCCC-------TTCC---SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred -----hcCcccCC-------cccc---cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 00000000 0001 1123667888999999999999999999999986554333
No 135
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=325.45 Aligned_cols=238 Identities=21% Similarity=0.390 Sum_probs=176.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEEecCC
Confidence 35799999999999986 568999999996542 2246789999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+++|.+++.... .++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 95 NGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp TEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999997542 3588999999999999999999998 9999999999999999999999999999765432
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....+++.|+|||.+.+..++.++||||||+++|||++|+.||......+... ... .. +.. ..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~----~~---~~~--~~ 232 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------KVV----LA---DYE--MP 232 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CC----SS---CCC--CC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------HHh----hc---ccC--Cc
Confidence 22357889999999999889999999999999999999999997543222110 000 00 000 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.. ....+.+++.+||+.||++|||+.++++
T Consensus 233 ~~---~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 233 SF---LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp TT---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cc---cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11 1235678889999999999999999986
No 136
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1e-38 Score=346.35 Aligned_cols=237 Identities=21% Similarity=0.363 Sum_probs=195.9
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... +|+.||||++.... .....+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 367999999999999965 68999999997542 2346789999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 100 GGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp SEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999754 2488999999999999999999998 9999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 -TVPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||..... ............. ..
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~---------~p 236 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICDGIFY---------TP 236 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHTTCCC---------CC
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcCCcC---------CC
Confidence 23468999999999988775 7899999999999999999999975321 1222222211100 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
... ...+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~---s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 237 QYL---NPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp TTC---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccC---CHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 111 234678888999999999999999997
No 137
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=332.85 Aligned_cols=255 Identities=22% Similarity=0.340 Sum_probs=191.3
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
+.||+|+||.||+|... +|+.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||++++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEEeCCCc
Confidence 57999999999999975 4899999998765433 35678999999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 88 VLHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp HHHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred hHHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 9999887542 488999999999999999999998 9999999999999999999999999999776532
Q ss_pred CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCCh---------hHHHHHHhhhcccccc
Q 006747 494 TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL---------PRWVQSVVREEWTSEV 563 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 563 (632)
....+|..|+|||.+.+ ..++.++|||||||++|||+||+.||.+....+.... +.+........+....
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence 23357888999999976 5679999999999999999999999976432211100 0000000000000000
Q ss_pred ccccccccCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 564 FDVELMRYENI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 564 ~d~~~~~~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
..+........ ......+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000000 1122357788999999999999999999874
No 138
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-38 Score=325.81 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=192.5
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC----HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG----KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 367999999999999964 6889999999765322 36688999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT- 494 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~- 494 (632)
+++|.+++.... ++++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 118 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 118 GVDLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 999999997542 488999999999999999999998 99999999999999999999999999987664432
Q ss_pred ----CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 495 ----VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 495 ----~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
...++..|+|||.+.+..++.++||||||+++|||+||+.||.... .............. +.. .
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~----~~~-~ 257 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-------LSVMGAHINQAIPR----PST-V 257 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-------HHHHHHHHHSCCCC----GGG-T
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-------HHHHHHHhccCCCC----ccc-c
Confidence 2357888999999999999999999999999999999999996432 11122222111110 000 0
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhhCCCCC
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRP-TMEEVVRMIEDIRPSDS 614 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~evl~~L~~i~~~~~ 614 (632)
... ....+.+++.+||+.||++|| |++++++.|+++.....
T Consensus 258 ~~~---~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 258 RPG---IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp STT---CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCC---CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 011 123466788899999999999 99999999999866643
No 139
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.6e-39 Score=331.73 Aligned_cols=252 Identities=26% Similarity=0.368 Sum_probs=200.3
Q ss_pred HhHhCccceeEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCC-ceEEEE
Q 006747 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD-EKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lv~ 411 (632)
.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++.++.+||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 46799999999999974 3468999999976532 23568899999999978999999999998755 489999
Q ss_pred ecccCCCHhhhhccCCCC-----------CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeE
Q 006747 412 DFIEAGSFSALLHGNRGI-----------GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGC 480 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~k 480 (632)
||+++|+|.+++...... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEE
Confidence 999999999999865321 022378999999999999999999998 999999999999999999999
Q ss_pred EcccCCCCCCCCCCC------CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 006747 481 ISDFGLTPLMNTPTV------PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQS 553 (632)
Q Consensus 481 i~DfGla~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 553 (632)
|+|||+++....... ..+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......+ ....
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~ 262 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 262 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHH
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHH
Confidence 999999987644321 235678999999999999999999999999999998 999997543211 1111
Q ss_pred HhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 554 VVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 554 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
......... .... ....+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 263 ~~~~~~~~~-------~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 263 RLKEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHHTCCCC-------CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhccCccCC-------CCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111211110 0011 12357788889999999999999999999998754
No 140
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.7e-39 Score=349.07 Aligned_cols=237 Identities=20% Similarity=0.293 Sum_probs=187.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|.. .+|+.||||+++... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 46899999999999985 468999999997542 2234577888899998 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHh-ccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA-AVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~- 493 (632)
+|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 232 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 232 GGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp SCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999997542 48899999999999999999998 6 8999999999999999999999999999864322
Q ss_pred ---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 494 ---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
....||++|+|||++.+..++.++|||||||++|||++|+.||..... ............. .
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---------~ 368 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEEIR---------F 368 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------C
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHHhCCCC---------C
Confidence 334689999999999999999999999999999999999999965321 1122222211110 0
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRP-----TMEEVVR 604 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~ 604 (632)
... ....+.+++.+||+.||++|| +++|+++
T Consensus 369 p~~---~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PRT---LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CTT---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred Ccc---CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 011 123567888899999999999 9999986
No 141
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.1e-39 Score=331.66 Aligned_cols=244 Identities=19% Similarity=0.294 Sum_probs=195.3
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM---GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
+.||+|+||.||+|... +++.||+|+++.... ....+.+|++++.++.+||||+++++++...+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 67999999999999865 589999999976532 35789999999999977899999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC---CCCeEEcccCCCCCCCCC-
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---DLQGCISDFGLTPLMNTP- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~~- 493 (632)
+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 115 ~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 115 EIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp EGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred cHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 9999986542 24589999999999999999999998 9999999999999998 789999999999876543
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....+|+.|+|||.+.+..++.++|||||||++|||++|+.||..... ........... . +.. .
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~-~----~~~---~ 254 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN------QETYLNISQVN-V----DYS---E 254 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTC-C----CCC---T
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHHHhcc-c----ccC---c
Confidence 233588999999999999999999999999999999999999965321 11111111110 0 000 0
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.........+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 255 ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0111122456788889999999999999999874
No 142
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.3e-38 Score=328.15 Aligned_cols=250 Identities=22% Similarity=0.395 Sum_probs=189.7
Q ss_pred HhHhCccceeEEEEEEEc----CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCc-----eE
Q 006747 341 AEVLGKGSYGTTYKAILE----EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDE-----KL 408 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~ 408 (632)
.+.||+|+||.||+|... .+..||+|+++..... .+.+.+|++++.++ +||||+++++++...+. .+
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCcccE
Confidence 467999999999999854 2458999999765333 35688999999999 89999999999987653 49
Q ss_pred EEEecccCCCHhhhhccCCC-CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCC
Q 006747 409 LVYDFIEAGSFSALLHGNRG-IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487 (632)
Q Consensus 409 lv~E~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla 487 (632)
+||||+++|+|.+++..... .....+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999853321 1335689999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCC------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 488 PLMNTP------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 488 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
+..... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ . ..... ....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~---~~~~~-~~~~ 267 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---M---YDYLL-HGHR 267 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H---HHHHH-TTCC
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---H---HHHHH-cCCC
Confidence 876432 12235678999999999999999999999999999999 888986543211 1 11111 1111
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
. .........+.+++.+||+.||++|||+.+++++|+++..
T Consensus 268 ~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 268 L----------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp C----------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C----------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 0111122457788899999999999999999999998754
No 143
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-38 Score=323.24 Aligned_cols=243 Identities=23% Similarity=0.336 Sum_probs=190.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||++.. .++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 46899999999999986 458899999997653 3467899999999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee---cCCCCeEEcccCCCCCCCCC-
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTP- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~- 493 (632)
+|.+++..... ....+++..+..++.+++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99998864321 123588999999999999999999998 99999999999999 45688999999999876543
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....++..|+|||.+. ..++.++|||||||++|||++|+.||.+... .............. .. ..
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~---~~---~~ 248 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL------EEVQQKATYKEPNY---AV---EC 248 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC---CC-----
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH------HHHHhhhccCCccc---cc---cc
Confidence 2345788999999885 5689999999999999999999999975321 11111111111000 00 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.. ....+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred Cc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01 1235668888999999999999999986
No 144
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.5e-39 Score=337.67 Aligned_cols=243 Identities=21% Similarity=0.335 Sum_probs=191.3
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
.+.||+|+||.||++... +++.||+|+++.... ...+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 467999999999999865 588999999976532 3456888888887899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCC----CCeEEcccCCCCCCCCC--
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD----LQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~----~~~ki~DfGla~~~~~~-- 493 (632)
.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 104 LDKILRQK-----FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp HHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 99987542 488999999999999999999998 99999999999998543 35999999999765432
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ........ ..+... +... .+
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~i-~~~~~~--~~~~--~~ 247 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEEILARI-GSGKFS--LSGG--YW 247 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---HHHHHHHH-HHCCCC--CCST--TT
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---HHHHHHHH-ccCCcc--cCcc--cc
Confidence 23457889999999988888999999999999999999999997532211 11222222 111110 0000 01
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
... ...+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~---s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 248 NSV---SDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TTS---CHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ccC---CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 112 2346678889999999999999999873
No 145
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.1e-39 Score=331.79 Aligned_cols=249 Identities=20% Similarity=0.317 Sum_probs=189.6
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC----HHHHHHHHHHHHhhcCCCCccceeEEEEeCCce----EEEE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG----KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEK----LLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~----~lv~ 411 (632)
.+.||+|+||.||+|.. .+++.||||+++..... ...+.+|++++.++ +||||+++++++...... ++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccEEEE
Confidence 36799999999999995 56899999999765322 24688899999999 899999999998876543 9999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+++|+|.++++... ++++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 96 e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 96 EYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp ECCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 9999999999997542 488999999999999999999998 99999999999999999999999999998664
Q ss_pred CCC-------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 492 TPT-------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 492 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
... ...+|+.|+|||.+.+..++.++|||||||++|||+||+.||..... ..............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~--- 238 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIP--- 238 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCCC---
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCCC---
Confidence 321 22478899999999999999999999999999999999999965321 11111111111110
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH-HHHhhhCCC
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV-RMIEDIRPS 612 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl-~~L~~i~~~ 612 (632)
+.. .... ....+.+++.+||+.||++||++.+++ ..+..+...
T Consensus 239 -~~~-~~~~---~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 239 -PSA-RHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp -HHH-HSTT---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred -ccc-ccCC---CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 000 0011 123567888899999999999666544 566665443
No 146
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.9e-38 Score=328.29 Aligned_cols=242 Identities=19% Similarity=0.326 Sum_probs=196.6
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM-------GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|... +|+.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEEE
Confidence 467999999999999965 589999999975422 357799999999999 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC----CeEEcccCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL----QGCISDFGLTP 488 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~----~~ki~DfGla~ 488 (632)
|+++|+|.+++... .++++..+..++.+++.||+|||+. +|+||||||+||++++++ .+||+|||+++
T Consensus 96 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999754 2588999999999999999999998 999999999999999888 79999999997
Q ss_pred CCCCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 489 LMNTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 489 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
..... ....+|+.|+|||.+.+..++.++|||||||++|||++|+.||.+... ............ .++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~---~~~ 238 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITSVSY---DFD 238 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCC---CCC
T ss_pred ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhccc---ccC
Confidence 76543 234588899999999999999999999999999999999999965321 111111111100 001
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.... .. ....+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~--~~---~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEFF--SH---TSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHH--TT---CCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhhh--cc---cCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1000 01 12356788899999999999999999873
No 147
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.6e-38 Score=348.78 Aligned_cols=244 Identities=20% Similarity=0.324 Sum_probs=196.8
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||++... +|+.||+|++.+.. .....+..|++++.++ +||||+++++++.+.+..|+||||+++
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 46999999999999975 58999999997542 3356788999999999 999999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC--
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-- 494 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-- 494 (632)
|+|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 999999876432 234689999999999999999999998 99999999999999999999999999998764332
Q ss_pred --CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 495 --VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 495 --~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
...||+.|+|||++.+..++.++|||||||++|||+||+.||....... ............... ...
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~~~~~~---------~p~ 414 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVLEQAVT---------YPD 414 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHHHCCCC---------CCT
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHhhcccC---------CCc
Confidence 2368999999999999999999999999999999999999997643211 122222222211100 011
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTM-----EEVVR 604 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~-----~evl~ 604 (632)
.. ...+.+++.+||+.||++||++ .++++
T Consensus 415 ~~---s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 415 KF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TS---CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cc---CHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11 2356678889999999999975 56654
No 148
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=8.3e-39 Score=331.87 Aligned_cols=252 Identities=22% Similarity=0.399 Sum_probs=198.5
Q ss_pred HhHhCccceeEEEEEEEc-CCcE--EEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTT--VVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~--vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... ++.. ||+|+++... ...+.+.+|++++.++.+||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 467999999999999854 4554 4999987532 2345689999999999789999999999999999999999999
Q ss_pred CCCHhhhhccCCC-----------CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEccc
Q 006747 416 AGSFSALLHGNRG-----------IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDF 484 (632)
Q Consensus 416 ~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~Df 484 (632)
+|+|.+++..... ....++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEEccc
Confidence 9999999976530 1234689999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 485 GLTPLMNTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 485 Gla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
|+++..... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||..... ...... +.....
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~-~~~~~~ 259 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEK-LPQGYR 259 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHH-GGGTCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HHHHHH-hhcCCC
Confidence 998754322 22346778999999988889999999999999999998 9999965321 111111 111111
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
. . .... ....+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 260 ~-----~--~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 260 L-----E--KPLN---CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp C-----C--CCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred C-----C--CCCC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 0 0111 123577888899999999999999999999988554
No 149
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-38 Score=325.37 Aligned_cols=241 Identities=25% Similarity=0.355 Sum_probs=193.3
Q ss_pred HhCccceeEEEEEEE---cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 343 VLGKGSYGTTYKAIL---EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~---~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.||+|+||.||+|.. ..+..||||+++..... .+.+.+|++++.++ +||||+++++++ ..+..++||||+++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 799999999999964 24678999999765322 46789999999999 899999999999 66778999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC--
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-- 494 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-- 494 (632)
|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 102 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 99999997642 488999999999999999999998 99999999999999999999999999997664332
Q ss_pred -----CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 495 -----VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 495 -----~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
...++..|+|||.+.+..++.++||||||+++|||+| |+.||...... . +...+.......
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~-~~~~~~~~~~~~------ 240 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------E-VTAMLEKGERMG------ 240 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTTCCCC------
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH------H-HHHHHHcCCCCC------
Confidence 1235677999999988889999999999999999999 99999753211 1 111111111110
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhC
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 610 (632)
........+.+++.+||+.||++|||+.++++.|+++-
T Consensus 241 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 241 ----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01112245778889999999999999999999999874
No 150
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=344.80 Aligned_cols=243 Identities=17% Similarity=0.223 Sum_probs=191.6
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM----GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+++.. +|+.||+|++++... ..+.+.+|.+++.++ +||||+++++++.+.+..|+||||++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 357999999999999974 689999999975321 223478899999998 99999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT- 494 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~- 494 (632)
+|+|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++++||+|||+++......
T Consensus 145 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 145 GGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp SCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999997542 2488899999999999999999998 99999999999999999999999999997764432
Q ss_pred ----CCCCCCcccCCcccc-------CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006747 495 ----VPSRSAGYRAPEVIE-------TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEV 563 (632)
Q Consensus 495 ----~~~~t~~y~aPE~~~-------~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (632)
...||+.|+|||++. +..++.++|||||||++|||++|+.||..... ......+........
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~~~- 290 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST------AETYGKIVHYKEHLS- 290 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHHHCC-
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhcccCcC-
Confidence 346899999999997 35689999999999999999999999975321 111122211100000
Q ss_pred ccccccccCCcHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 006747 564 FDVELMRYENIEEEMVQMLQIAMSCVAKVPDMR---PTMEEVVRM 605 (632)
Q Consensus 564 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R---Ps~~evl~~ 605 (632)
-+.. ... ...++.+++.+||+ +|++| |+++|++++
T Consensus 291 -~p~~--~~~---~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 291 -LPLV--DEG---VPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -CC------C---CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -CCcc--ccC---CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0000 011 12356778889999 99998 689998764
No 151
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.1e-40 Score=350.97 Aligned_cols=237 Identities=12% Similarity=0.155 Sum_probs=182.9
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc----cCHHHHHHHHHHHHhhc--CCCCcccee-------EEEEeCCc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV----MGKREFEQQMEVVGRLS--QHPNVVPIR-------AYYFSKDE 406 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~--~h~niv~l~-------~~~~~~~~ 406 (632)
.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++..+. +|||||+++ +++...+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 36799999999999995 569999999997432 22467889995444332 899999998 66665532
Q ss_pred -----------------eEEEEecccCCCHhhhhccCCCCC--CCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCC
Q 006747 407 -----------------KLLVYDFIEAGSFSALLHGNRGIG--RTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467 (632)
Q Consensus 407 -----------------~~lv~E~~~~g~L~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk 467 (632)
.++||||+ +|+|.+++....... ..+++|..+..|+.|++.||+|||+. +|+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 78999999 689999997543211 23456788899999999999999998 99999999
Q ss_pred CCCeeecCCCCeEEcccCCCCCCCCCC-CCCCCCcccCCccccCC-----------CCCccchhhHHHHHHHHHHhCCCC
Q 006747 468 SSNVLLSQDLQGCISDFGLTPLMNTPT-VPSRSAGYRAPEVIETK-----------KPTQKSDVYSFGVLLLEMLTGKAP 535 (632)
Q Consensus 468 ~~NILl~~~~~~ki~DfGla~~~~~~~-~~~~t~~y~aPE~~~~~-----------~~~~~~DV~s~Gvvl~elltg~~p 535 (632)
|+|||++.++.+||+|||+++...... ...+ +.|+|||.+.+. .++.++|||||||++|||+||+.|
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998655432 2346 889999999887 799999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 536 IQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
|........... +.. ..... ...+.+++.+||+.||++|||+.|+++
T Consensus 313 f~~~~~~~~~~~---------------~~~----~~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 313 ITKDAALGGSEW---------------IFR----SCKNI---PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp C------CCSGG---------------GGS----SCCCC---CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred Ccccccccchhh---------------hhh----hccCC---CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 975432221110 000 01111 235677888999999999999999986
No 152
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-38 Score=321.63 Aligned_cols=235 Identities=23% Similarity=0.342 Sum_probs=172.9
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+ +
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 5799999999999984 568999999997542 2256788999999999 8999999999999999999999999 6
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 97 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 168 (275)
T 2eue_A 97 NELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 168 (275)
T ss_dssp EEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcccc
Confidence 6888887654 2488999999999999999999998 9999999999999999999999999999776543
Q ss_pred CCCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 494 TVPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
....+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||.... .............. ...
T Consensus 169 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~---------~~~ 233 (275)
T 2eue_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT---------LPK 233 (275)
T ss_dssp ------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------CCT
T ss_pred cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---------CCc
Confidence 23357889999999988775 789999999999999999999996532 11111111111100 001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 234 ~---~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 234 F---LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp T---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c---CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1 1234678888999999999999999976
No 153
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-38 Score=322.24 Aligned_cols=238 Identities=24% Similarity=0.361 Sum_probs=192.4
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEecCC
Confidence 367999999999999865 46789999986532 2356788999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|.+++.... ++++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 93 LGTVYRELQKLS-----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999987542 488899999999999999999998 9999999999999999999999999998665433
Q ss_pred CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 494 TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
....++..|+|||.+.+..++.++||||||+++|||++|+.||.... ............. . ....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~-------~--~~~~ 229 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEF-------T--FPDF 229 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCC-------C--CCTT
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc------HHHHHHHHHhCCC-------C--CCCc
Confidence 23457889999999999999999999999999999999999996432 1111111111100 0 0011
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
....+.+++.+||+.||++|||+.|++++
T Consensus 230 ---~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 230 ---VTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ---SCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ---CCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 12346678889999999999999999974
No 154
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.9e-39 Score=347.70 Aligned_cols=193 Identities=22% Similarity=0.319 Sum_probs=168.4
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhc-----CCCCccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLS-----QHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|... +++.||||+++......+.+.+|++++..+. +|+||+++++++......++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 368999999999999864 4889999999865444567888888888773 5779999999999999999999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC--eEEcccCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ--GCISDFGLTPLMNT 492 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~--~ki~DfGla~~~~~ 492 (632)
. |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 182 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 182 S-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp C-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 6 69999887653 23589999999999999999999998 9999999999999999987 99999999976654
Q ss_pred C-CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCC
Q 006747 493 P-TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPG 540 (632)
Q Consensus 493 ~-~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~ 540 (632)
. ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.+..
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 3 33468899999999999999999999999999999999999997643
No 155
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.9e-39 Score=327.35 Aligned_cols=247 Identities=24% Similarity=0.409 Sum_probs=193.4
Q ss_pred HhHhCccceeEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEe-CCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILEE----GTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFS-KDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|...+ ...||+|.++.... ..+.+.+|++++.++ +||||+++++++.. .+..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEeC
Confidence 3679999999999998543 23689999875432 245688999999999 89999999999754 5578999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 109 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999997542 3578899999999999999999998 9999999999999999999999999999866432
Q ss_pred --------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhC-CCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 494 --------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTG-KAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 494 --------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
....+|+.|+|||.+.+..++.++||||||+++|||++| ..||......+ ... ........ .
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~---~~~~~~~~---~ 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV---YLLQGRRL---L 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHH---HHHTTCCC---C
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHH---HHhcCCCC---C
Confidence 222456789999999999999999999999999999994 55554432211 111 11111100 0
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.... ....+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 253 -----~~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 253 -----QPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp -----CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----CCcc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0111 123577888999999999999999999999998543
No 156
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=332.76 Aligned_cols=232 Identities=19% Similarity=0.307 Sum_probs=192.2
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc---------CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM---------GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 410 (632)
.+.||+|+||.||+|.. .+++.||||+++.... ....+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEE
Confidence 45799999999999985 5688999999976532 223577899999999 899999999999999999999
Q ss_pred EecccCC-CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCC
Q 006747 411 YDFIEAG-SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPL 489 (632)
Q Consensus 411 ~E~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 489 (632)
|||+.+| +|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 108 ~e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 9999777 9999997542 488999999999999999999998 999999999999999999999999999987
Q ss_pred CCCCC---CCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 490 MNTPT---VPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 490 ~~~~~---~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
..... ...+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||...... ..
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------------~~ 238 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------------VE 238 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------------TT
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------------Hh
Confidence 65433 2358899999999988876 78999999999999999999999642100 00
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
......... ...+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~---~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 AAIHPPYLV---SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TCCCCSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hccCCCccc---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000011111 2346788889999999999999999985
No 157
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=336.16 Aligned_cols=255 Identities=13% Similarity=0.160 Sum_probs=197.6
Q ss_pred HhHhCccceeEEEEEEEcC---------CcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccc---------------
Q 006747 341 AEVLGKGSYGTTYKAILEE---------GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVP--------------- 396 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~--------------- 396 (632)
.+.||+|+||.||+|.... ++.||+|++... +.+.+|++++.++ +||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-cccchhhhhhhhccCCccCccc
Confidence 3679999999999999753 789999999754 4588999999999 8999987
Q ss_pred eeEEEEe-CCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC
Q 006747 397 IRAYYFS-KDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ 475 (632)
Q Consensus 397 l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~ 475 (632)
+++++.. ....++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDP 194 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEET
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcC
Confidence 6778876 67889999999 999999998642 23589999999999999999999998 9999999999999999
Q ss_pred CC--CeEEcccCCCCCCCCC-----------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCC
Q 006747 476 DL--QGCISDFGLTPLMNTP-----------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHE 542 (632)
Q Consensus 476 ~~--~~ki~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~ 542 (632)
++ .+||+|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 9999999999765422 2235788999999999999999999999999999999999999754311
Q ss_pred CCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCC
Q 006747 543 DVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614 (632)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~ 614 (632)
. ..+........ . ......+... ..... ...+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 275 ~-~~~~~~~~~~~-~-~~~~~~~~~~-~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 275 T-EDIMKQKQKFV-D-KPGPFVGPCG-HWIRP---SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp H-HHHHHHHHHHH-H-SCCCEECTTS-CEECC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred H-HHHHHHHHhcc-C-Chhhhhhhcc-ccCCC---cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 1 11111111111 1 1111111100 00111 2457778889999999999999999999999865543
No 158
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.6e-39 Score=334.16 Aligned_cols=252 Identities=19% Similarity=0.220 Sum_probs=192.8
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc------cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV------MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeC
Confidence 46899999999999986 457899999986541 2246789999999999 899999999999999999999999
Q ss_pred ccCCCHhhhhccCCCC-----------------------------------CCCcCCHHHHHHHHHHHHHHHHHHHhccC
Q 006747 414 IEAGSFSALLHGNRGI-----------------------------------GRTPLDWESRVKISLGSAKGIAHIHAAVG 458 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 458 (632)
+++|+|.+++...... ....+++.....++.|++.||+|||+.
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-- 187 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ-- 187 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 9999999998531100 011245677788999999999999998
Q ss_pred CCceecCCCCCCeeecCCC--CeEEcccCCCCCCCC--------CCCCCCCCcccCCccccC--CCCCccchhhHHHHHH
Q 006747 459 GKFILGNIKSSNVLLSQDL--QGCISDFGLTPLMNT--------PTVPSRSAGYRAPEVIET--KKPTQKSDVYSFGVLL 526 (632)
Q Consensus 459 ~~ivHrDlk~~NILl~~~~--~~ki~DfGla~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~DV~s~Gvvl 526 (632)
+|+||||||+||+++.++ .+||+|||+++.... .....+|+.|+|||.+.+ ..++.++|||||||++
T Consensus 188 -~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 188 -GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp -TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred -CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 999999999999998776 899999999975432 123457889999999975 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--
Q 006747 527 LEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR-- 604 (632)
Q Consensus 527 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~-- 604 (632)
|||++|+.||..... .............. ..+. .......+.+++.+||+.||++|||+.|+++
T Consensus 267 ~el~~g~~pf~~~~~------~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp 332 (345)
T 3hko_A 267 HLLLMGAVPFPGVND------ADTISQVLNKKLCF--ENPN------YNVLSPLARDLLSNLLNRNVDERFDAMRALQHP 332 (345)
T ss_dssp HHHHHSSCSSCCSSH------HHHHHHHHHCCCCT--TSGG------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSH
T ss_pred HHHHHCCCCCCCCCh------HHHHHHHHhccccc--CCcc------cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCh
Confidence 999999999965321 11122222111100 0000 0111235678888999999999999999988
Q ss_pred HHhhhC
Q 006747 605 MIEDIR 610 (632)
Q Consensus 605 ~L~~i~ 610 (632)
.++++.
T Consensus 333 ~~~~~~ 338 (345)
T 3hko_A 333 WISQFS 338 (345)
T ss_dssp HHHTTS
T ss_pred hhccCh
Confidence 355543
No 159
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.1e-39 Score=326.64 Aligned_cols=245 Identities=22% Similarity=0.350 Sum_probs=194.5
Q ss_pred HhHhCccceeEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILEE----GTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|...+ +..||+|.+..... ..+.+.+|++++.++ +||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCCEEEEecC
Confidence 3679999999999998543 23699999976422 346789999999999 89999999999764 5678999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT 494 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 494 (632)
++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 95 PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999997542 3488999999999999999999998 99999999999999999999999999998765432
Q ss_pred -----CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 495 -----VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 495 -----~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
...++..|+|||.+.+..++.++||||||+++|||+| |+.||......+ .... ........
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~----~~~~~~~~------ 234 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGV----LEKGDRLP------ 234 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHH----HHHTCCCC------
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHH----HhcCCCCC------
Confidence 2345678999999998899999999999999999998 999996533221 1111 11111000
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
.... ....+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 235 -~~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 235 -KPDL---CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp -CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCC---CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 0011 12357788889999999999999999999998743
No 160
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.7e-39 Score=336.35 Aligned_cols=252 Identities=23% Similarity=0.339 Sum_probs=199.8
Q ss_pred HhHhCccceeEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILEE------GTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|.... ...||+|.++.... ..+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 4679999999999998643 24799999976532 245688999999999779999999999999999999999
Q ss_pred cccCCCHhhhhccCCC---------CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcc
Q 006747 413 FIEAGSFSALLHGNRG---------IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISD 483 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~D 483 (632)
|+++|+|.+++..... ....++++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEECc
Confidence 9999999999875321 0123578999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCC------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhh
Q 006747 484 FGLTPLMNTPT------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVR 556 (632)
Q Consensus 484 fGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 556 (632)
||+++...... ...++..|+|||.+.+..++.++|||||||++|||+| |..||....... .......
T Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~ 281 (333)
T 2i1m_A 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------KFYKLVK 281 (333)
T ss_dssp CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------HHHHHHH
T ss_pred cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------HHHHHHh
Confidence 99998654322 2235667999999998899999999999999999999 999997543211 1112222
Q ss_pred hccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 557 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
...... .... ....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 282 ~~~~~~-------~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 282 DGYQMA-------QPAF---APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HTCCCC-------CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCC-------CCCC---CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 211110 0011 12357788899999999999999999999998743
No 161
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=330.59 Aligned_cols=253 Identities=21% Similarity=0.357 Sum_probs=195.6
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEe----CCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFS----KDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~E~~ 414 (632)
.+.||+|+||.||++.. .+++.||||++.... ...+.+.+|++++.++ +||||+++++++.. ....++||||+
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 36799999999999996 578999999986542 2356789999999999 99999999999973 34688999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT 494 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 494 (632)
++|+|.+++..... ...++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999875321 234689999999999999999999998 99999999999999999999999999987654211
Q ss_pred -------------CCCCCCcccCCccccCCC---CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc
Q 006747 495 -------------VPSRSAGYRAPEVIETKK---PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREE 558 (632)
Q Consensus 495 -------------~~~~t~~y~aPE~~~~~~---~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (632)
...+|..|+|||.+.+.. ++.++|||||||++|||++|+.||........ .... .....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~----~~~~~ 263 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVAL----AVQNQ 263 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHH----HHHCC
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhH----Hhhcc
Confidence 112588899999987654 68999999999999999999999853211100 1110 01110
Q ss_pred cccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 559 WTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 559 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
.. . .........+.+++.+||+.||++|||+.+++++|+.+.+..
T Consensus 264 ~~-------~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 264 LS-------I---PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp ---------C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred CC-------C---CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 00 0 000112235778889999999999999999999999986553
No 162
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.8e-39 Score=331.17 Aligned_cols=251 Identities=23% Similarity=0.370 Sum_probs=200.3
Q ss_pred HhHhCccceeEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE------EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|... ++..||+|++..... ....+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEE
Confidence 367999999999999854 368899999975432 234688999999999 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCC-----CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCC
Q 006747 413 FIEAGSFSALLHGNRG-----IGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla 487 (632)
|+++|+|.+++...+. ....++++..+.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999875321 1124578999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCC------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 488 PLMNTPT------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 488 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
+...... ...+++.|+|||.+.+..++.++|||||||++|||+| |+.||..... ........ ....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~-~~~~ 258 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------EQVLRFVM-EGGL 258 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------HHHHHHHH-TTCC
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------HHHHHHHH-cCCc
Confidence 7654321 2235678999999999899999999999999999999 8899865321 11111111 1111
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.. ... .....+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 259 ~~-------~~~---~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 259 LD-------KPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp CC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred CC-------CCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 00 011 1223577888899999999999999999999988554
No 163
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.1e-38 Score=320.52 Aligned_cols=241 Identities=20% Similarity=0.335 Sum_probs=194.3
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 57999999999999864 5889999999765433 35678899999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC---eEEcccCCCCCCCCCC
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ---GCISDFGLTPLMNTPT 494 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~~~~~~~ 494 (632)
+|.+.+.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+|||++.......
T Consensus 91 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 91 ELFEDIVARE-----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9998887542 488999999999999999999998 9999999999999987655 9999999997665433
Q ss_pred ---CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 495 ---VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 495 ---~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
...+++.|+|||.+.+..++.++||||||+++|||++|+.||..... ............. ......
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~-----~~~~~~ 231 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYD-----YPSPEW 231 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC-----CCTTTT
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch------hHHHHHHHhcccc-----CCchhh
Confidence 24578899999999999999999999999999999999999965321 1111111111110 000001
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.. ....+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~---~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 232 DT---VTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TT---SCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cc---cCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11 12346788889999999999999999883
No 164
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.6e-38 Score=342.62 Aligned_cols=249 Identities=18% Similarity=0.250 Sum_probs=197.1
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
+.||+|+||.||+|.. .+++.||||++..... ..++..|++++..+.+|++|..+..++...+..++||||+ +++|.
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~ 90 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLE 90 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHH
Confidence 5799999999999995 5689999998865432 3458889999999955577777777778888899999999 99999
Q ss_pred hhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee---cCCCCeEEcccCCCCCCCCCC---
Q 006747 421 ALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTPT--- 494 (632)
Q Consensus 421 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~--- 494 (632)
+++.... ..+++..++.|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++......
T Consensus 91 ~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 91 DLFNFCS----RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 9997532 3589999999999999999999998 99999999999999 688999999999997654322
Q ss_pred --------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 495 --------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 495 --------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
...+|..|+|||.+.+..++.++|||||||++|||++|+.||.+............+.. ... .....
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~---~~~-~~~~~- 238 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---KKV-ATSIE- 238 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH---HHH-HSCHH-
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh---ccc-cccHH-
Confidence 34588899999999999999999999999999999999999986543322111111111 100 00000
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhh
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDI 609 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 609 (632)
.+ ... ...++.+++..||+.+|++||++.+|++.|+++
T Consensus 239 ~l--~~~---~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 239 AL--CRG---YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HH--HTT---SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HH--hcC---CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00 001 124577888999999999999999999999987
No 165
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2e-38 Score=321.99 Aligned_cols=241 Identities=18% Similarity=0.338 Sum_probs=194.1
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM---GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+..+.++.+||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 367999999999999975 689999999976422 2456888899888887899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC-------------------CC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ-------------------DL 477 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~-------------------~~ 477 (632)
|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ..
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999975421 113588999999999999999999998 9999999999999984 44
Q ss_pred CeEEcccCCCCCCCCCCCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh
Q 006747 478 QGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVR 556 (632)
Q Consensus 478 ~~ki~DfGla~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 556 (632)
.+||+|||.+..........+|..|+|||.+.+. .++.++|||||||++|||++|+.|+.... .+ .. +.
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~-~~-~~ 241 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------QW-HE-IR 241 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------HH-HH-HH
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------HH-HH-HH
Confidence 8999999999888777667799999999999876 56789999999999999999988764211 01 11 11
Q ss_pred hccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 557 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
...... + .... ...+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~-----~--~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 242 QGRLPR-----I--PQVL---SQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTCCCC-----C--SSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cCCCCC-----C--Cccc---CHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111111 0 0111 2356788889999999999999999863
No 166
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.7e-39 Score=325.66 Aligned_cols=245 Identities=25% Similarity=0.424 Sum_probs=191.8
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeC-CceEEEEecccCCCH
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSK-DEKLLVYDFIEAGSF 419 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lv~E~~~~g~L 419 (632)
.+.||+|+||.||++... |+.||||+++... ..+.+.+|++++.++ +||||+++++++.+. +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 467999999999999875 8899999997543 456789999999999 899999999997654 478999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-CCCCC
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-TVPSR 498 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-~~~~~ 498 (632)
.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++..... ....+
T Consensus 103 ~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 176 (278)
T 1byg_A 103 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176 (278)
T ss_dssp HHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred HHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence 99997542 22478899999999999999999998 9999999999999999999999999999765543 23346
Q ss_pred CCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHH
Q 006747 499 SAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEE 577 (632)
Q Consensus 499 t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 577 (632)
+..|+|||.+.+..++.++||||||+++|||+| |+.||......+ .... ....... ......
T Consensus 177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~-~~~~~~~----------~~~~~~ 239 (278)
T 1byg_A 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPR-VEKGYKM----------DAPDGC 239 (278)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG------HHHH-HTTTCCC----------CCCTTC
T ss_pred cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHH-HhcCCCC----------CCcccC
Confidence 778999999998899999999999999999998 999997533211 1111 1111110 001112
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCC
Q 006747 578 MVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRP 611 (632)
Q Consensus 578 ~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 611 (632)
...+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 2457788889999999999999999999998854
No 167
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.9e-38 Score=320.50 Aligned_cols=250 Identities=18% Similarity=0.343 Sum_probs=198.8
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM-------GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||++... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++......++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEe
Confidence 467999999999999975 589999999875421 357899999999999 89999999999999999999999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC----CeEEcccCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL----QGCISDFGLTP 488 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~----~~ki~DfGla~ 488 (632)
|+++++|.+++... .++++..+..++.+++.||+|||+. +|+||||||+||++++++ .+||+|||+++
T Consensus 89 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 89 LVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred ecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999754 2488999999999999999999998 999999999999999877 89999999997
Q ss_pred CCCCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 489 LMNTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 489 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
..... ....+++.|+|||.+.+..++.++||||||+++|||++|+.||..... ........ .... ...
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~-~~~~--~~~ 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK------QETLTNIS-AVNY--DFD 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH-TTCC--CCC
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch------HHHHHHhH-hccc--CCc
Confidence 66433 223578889999999999999999999999999999999999965321 11111111 1000 000
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhhCCCC
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR--MIEDIRPSD 613 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i~~~~ 613 (632)
... .. .....+.+++.+||+.||++|||+.|+++ .++.+....
T Consensus 232 ~~~--~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 232 EEY--FS---NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp HHH--HT---TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred chh--cc---cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 000 00 11235678889999999999999999998 566665443
No 168
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.9e-39 Score=346.98 Aligned_cols=253 Identities=21% Similarity=0.303 Sum_probs=186.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeC------CceEEE
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSK------DEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 410 (632)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|++++..+ +||||+++++++... ...++|
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccCCeEEEE
Confidence 367999999999999854 5889999999764322 45688999999999 999999999999755 356999
Q ss_pred EecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCC
Q 006747 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM 490 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 490 (632)
|||++++ |.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 146 ~E~~~~~-l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 146 MELMDAN-LCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EECCSEE-HHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EeCCCCC-HHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 9999864 6666642 278899999999999999999998 9999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCCh---------hH-------HH
Q 006747 491 NTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL---------PR-------WV 551 (632)
Q Consensus 491 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~---------~~-------~~ 551 (632)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.... +. ..
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~ 294 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence 543 234689999999999999999999999999999999999999976432111000 00 00
Q ss_pred HHHhhhccc-c-----ccccccccccCC--cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 552 QSVVREEWT-S-----EVFDVELMRYEN--IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 552 ~~~~~~~~~-~-----~~~d~~~~~~~~--~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
+........ . ..+...+..... ......++.+|+.+||+.||++|||++|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0 000000000000 01124568899999999999999999999874
No 169
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.4e-38 Score=338.75 Aligned_cols=259 Identities=18% Similarity=0.262 Sum_probs=196.6
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhc-------CCCCccceeEEEE----eCCceE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS-------QHPNVVPIRAYYF----SKDEKL 408 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-------~h~niv~l~~~~~----~~~~~~ 408 (632)
.+.||+|+||.||+|.. .+++.||||+++......+.+.+|++++.++. +|+||+++++++. .....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 36799999999999985 45889999999865444567889999999884 2888999999988 455789
Q ss_pred EEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC-----------
Q 006747 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL----------- 477 (632)
Q Consensus 409 lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~----------- 477 (632)
+||||+ +|++.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~~~ 195 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEAT 195 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHHHC
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhhhH
Confidence 999999 556666655432 235889999999999999999999853 799999999999999775
Q ss_pred --------------------------------------CeEEcccCCCCCCCCC-CCCCCCCcccCCccccCCCCCccch
Q 006747 478 --------------------------------------QGCISDFGLTPLMNTP-TVPSRSAGYRAPEVIETKKPTQKSD 518 (632)
Q Consensus 478 --------------------------------------~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~D 518 (632)
.+||+|||+++..... ....+|..|+|||++.+..++.++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 275 (397)
T 1wak_A 196 EWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPAD 275 (397)
T ss_dssp ---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHH
T ss_pred HHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHH
Confidence 8999999999766543 3346899999999999999999999
Q ss_pred hhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh------------hcccccccccc------------------c
Q 006747 519 VYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVR------------EEWTSEVFDVE------------------L 568 (632)
Q Consensus 519 V~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~d~~------------------~ 568 (632)
||||||++|||+||+.||......+............. ..+....+... .
T Consensus 276 iwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
T 1wak_A 276 IWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 355 (397)
T ss_dssp HHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhh
Confidence 99999999999999999986554332211111111100 00000111000 0
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.......+....+.+|+.+||+.||++|||++|++++
T Consensus 356 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 356 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0112234556778899999999999999999999863
No 170
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.3e-39 Score=338.64 Aligned_cols=238 Identities=21% Similarity=0.286 Sum_probs=183.6
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC----HHHHHHHHHHH-HhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG----KREFEQQMEVV-GRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l-~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|+.. +++.||+|++++.... ...+..|..++ ..+ +||||+++++++.+.+..|+||||+
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~~~~~lv~E~~ 121 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYI 121 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeCCEEEEEEeCC
Confidence 367999999999999965 4789999999765322 23455666654 445 8999999999999999999999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC--
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT-- 492 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~-- 492 (632)
++|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 122 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 122 NGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999997543 477888899999999999999998 999999999999999999999999999976322
Q ss_pred --CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 493 --PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 493 --~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... .
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~---------~ 258 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILNKPLQ---------L 258 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB------HHHHHHHHHHSCCC---------C
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHhcccC---------C
Confidence 233468999999999999999999999999999999999999996532 11222222221100 0
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.... ...+.+++.+||+.||++||++.+.+..
T Consensus 259 ~~~~---~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 259 KPNI---TNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp CSSS---CHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred CCCC---CHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 1111 2346678889999999999998643333
No 171
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-39 Score=336.23 Aligned_cols=244 Identities=21% Similarity=0.331 Sum_probs=194.6
Q ss_pred HhHhCccceeEEEEEEE----cCCcEEEEEEecccc-----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEE
Q 006747 341 AEVLGKGSYGTTYKAIL----EEGTTVVVKRLKEVV-----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 411 (632)
.+.||+|+||.||++.. .+++.||||+++... ...+.+.+|++++.++.+||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 46799999999999987 468999999997532 234567789999999977999999999999999999999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999997542 488899999999999999999998 99999999999999999999999999997653
Q ss_pred CC-----CCCCCCCcccCCccccCC--CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 492 TP-----TVPSRSAGYRAPEVIETK--KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 492 ~~-----~~~~~t~~y~aPE~~~~~--~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
.. ....+|+.|+|||.+.+. .++.++|||||||++|||+||+.||....... ..............
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~----- 283 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEP----- 283 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCCC-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccCC-----
Confidence 22 223588999999999863 47899999999999999999999997543222 12222222211110
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRP-----TMEEVVRMI 606 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~~L 606 (632)
....+....+.+++.+||+.||++|| |+.|++++.
T Consensus 284 -------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 -------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00111123467788899999999999 999998754
No 172
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.7e-38 Score=319.89 Aligned_cols=240 Identities=21% Similarity=0.314 Sum_probs=193.8
Q ss_pred HhHhCccceeEEEEEEEcC-CcEEEEEEeccc-ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAILEE-GTTVVVKRLKEV-VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||+|.... +..||+|++... ....+.+.+|++++.++ +||||+++++++.+.+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 4679999999999999654 678999999765 34567899999999999 99999999999999999999999999999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee---cCCCCeEEcccCCCCCCCCC--
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~-- 493 (632)
|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 93 L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 93 LFERVVHKR-----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 999887542 488999999999999999999998 99999999999999 78899999999999765433
Q ss_pred -CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 494 -TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
....+|+.|+|||.+.+. ++.++||||||+++|||++|+.||..... ...... +...... .... ...
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~-~~~~~~~-~~~~---~~~ 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD------SEVMLK-IREGTFT-FPEK---DWL 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH-HHHCCCC-CCHH---HHT
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH------HHHHHH-HHhCCCC-CCch---hhh
Confidence 234588899999998654 89999999999999999999999965321 111111 1111100 0000 000
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.....+.+++.+||+.||++|||+.++++
T Consensus 233 ---~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 ---NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11245778889999999999999999986
No 173
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.5e-39 Score=343.53 Aligned_cols=247 Identities=11% Similarity=0.016 Sum_probs=176.5
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHhhc-CCCCcccee-------EEEEeC---
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM----GKREFEQQMEVVGRLS-QHPNVVPIR-------AYYFSK--- 404 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~-~h~niv~l~-------~~~~~~--- 404 (632)
.+.||+|+||.||+|... +++.||||+++.... ..+.+.+|++++..+. +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 367999999999999964 689999999987543 2345778876666663 499987754 455433
Q ss_pred --------------CceEEEEecccCCCHhhhhccCCCCCCCcCCHHHH------HHHHHHHHHHHHHHHhccCCCceec
Q 006747 405 --------------DEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESR------VKISLGSAKGIAHIHAAVGGKFILG 464 (632)
Q Consensus 405 --------------~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ivHr 464 (632)
...++||||++ |+|.+++..... .+.+..+ ..++.|++.||+|||+. +|+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccC
Confidence 23799999999 899999986421 2344555 77889999999999998 99999
Q ss_pred CCCCCCeeecCCCCeEEcccCCCCCCCCCC-CCCCCCcccCCccccC--CCCCccchhhHHHHHHHHHHhCCCCCCCCCC
Q 006747 465 NIKSSNVLLSQDLQGCISDFGLTPLMNTPT-VPSRSAGYRAPEVIET--KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGH 541 (632)
Q Consensus 465 Dlk~~NILl~~~~~~ki~DfGla~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~ 541 (632)
||||+|||++.++.+||+|||+++...... ...+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998776544 4456789999999987 6799999999999999999999999976532
Q ss_pred CCCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 542 EDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
...... ............. ...........+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSW--------KRPSLRVPGTDSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCC--------CBCCTTSCCCCSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccch--------hhhhhhhcccccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 211100 0000000000000 00000112345677888999999999999999975
No 174
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=8e-38 Score=318.67 Aligned_cols=239 Identities=23% Similarity=0.381 Sum_probs=189.8
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEe----CCceEEEEec
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFS----KDEKLLVYDF 413 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~E~ 413 (632)
+.||+|+||.||+|.. .++..||+|++...... .+.+.+|++++.++ +||||+++++++.. ....++||||
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 4699999999999986 45788999999765433 35688999999999 89999999999876 3458999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCeeec-CCCCeEEcccCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK--FILGNIKSSNVLLS-QDLQGCISDFGLTPLM 490 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrDlk~~NILl~-~~~~~ki~DfGla~~~ 490 (632)
+++|+|.+++.... .+++..+..++.+++.||+|||+. + |+||||||+||+++ +++.+||+|||++...
T Consensus 111 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 111 MTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred cCCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999997542 478899999999999999999998 6 99999999999998 7899999999999765
Q ss_pred CCCC--CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 491 NTPT--VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 491 ~~~~--~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
.... ...+++.|+|||.+.+ .++.++|||||||++|||++|+.||..... ....... .........++.
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~-~~~~~~~~~~~~-- 253 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIYRR-VTSGVKPASFDK-- 253 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHHHH-HTTTCCCGGGGG--
T ss_pred cccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-----HHHHHHH-HhccCCccccCC--
Confidence 4432 2358889999998864 589999999999999999999999965321 1111111 111111111110
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
. ....+.+++.+||+.||++|||+.|++++
T Consensus 254 ----~---~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 254 ----V---AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----C---CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----C---CCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1 11357788899999999999999999863
No 175
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=334.77 Aligned_cols=259 Identities=17% Similarity=0.289 Sum_probs=191.1
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccC--HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
+.||+|+||.||+|... +++.||+|+++..... ...+.+|++++.++ +||||+++++++...+..++||||++ |+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 57999999999999965 6899999999754322 12355789999999 89999999999999999999999998 58
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----C
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----T 494 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~ 494 (632)
|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 86 l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 158 (324)
T 3mtl_A 86 LKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158 (324)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence 998887642 3588999999999999999999998 9999999999999999999999999999765432 2
Q ss_pred CCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---cccccccccc---
Q 006747 495 VPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE---EWTSEVFDVE--- 567 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~--- 567 (632)
...+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+ ....+...... ..........
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhhc
Confidence 2356889999999877 568999999999999999999999997643211 11111111110 0000000000
Q ss_pred ---cc--ccCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhhCCC
Q 006747 568 ---LM--RYENI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR--MIEDIRPS 612 (632)
Q Consensus 568 ---~~--~~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i~~~ 612 (632)
.. ..... ......+.+++.+||+.||++|||++|+++ .+..+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 00 00000 011235678899999999999999999988 45665444
No 176
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-38 Score=346.59 Aligned_cols=181 Identities=27% Similarity=0.429 Sum_probs=146.1
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeC-----CceEEEE
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSK-----DEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~ 411 (632)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|++++.++ +|||||++++++... ...|+||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEE
Confidence 367999999999999854 6899999999764333 35688999999999 899999999999543 4689999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+. |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 137 e~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9985 6999998754 3588999999999999999999998 99999999999999999999999999998764
Q ss_pred CC-------------------------------CCCCCCCcccCCccc-cCCCCCccchhhHHHHHHHHHHh
Q 006747 492 TP-------------------------------TVPSRSAGYRAPEVI-ETKKPTQKSDVYSFGVLLLEMLT 531 (632)
Q Consensus 492 ~~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~~DV~s~Gvvl~ellt 531 (632)
.. ....+|+.|+|||++ .+..++.++|||||||++|||+|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 21 122468889999986 45669999999999999999999
No 177
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.3e-38 Score=317.94 Aligned_cols=241 Identities=21% Similarity=0.315 Sum_probs=194.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 357999999999999965 689999999975432 246789999999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC-----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT----- 492 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~----- 492 (632)
+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999998753 3588999999999999999999998 999999999999999999999999999875432
Q ss_pred -CCCCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 493 -PTVPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 493 -~~~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
.....++..|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....| ..... ..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~-----~~~~~--~~------ 228 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDW-----KEKKT--YL------ 228 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHH-----HTTCT--TS------
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHh-----hhccc--cc------
Confidence 123457889999999987765 7789999999999999999999976432211 11111 11100 00
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.........+.+++.+||+.||++|||+.|++++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 -NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0001112356678889999999999999999763
No 178
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.4e-38 Score=331.14 Aligned_cols=254 Identities=20% Similarity=0.297 Sum_probs=196.5
Q ss_pred HhHhCccceeEEEEEEE--cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCC------CccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAIL--EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP------NVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~------niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|.. .+++.||||+++......+.+.+|++++..+ +|+ +++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 35799999999999986 3688999999986544456788999999888 555 59999999999999999999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC-----------------
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ----------------- 475 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~----------------- 475 (632)
|+ +++|.+++.... ..++++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99 889999987653 34688999999999999999999998 9999999999999987
Q ss_pred --CCCeEEcccCCCCCCCCC-CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 006747 476 --DLQGCISDFGLTPLMNTP-TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQ 552 (632)
Q Consensus 476 --~~~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 552 (632)
++.+||+|||+++..... ....+|..|+|||.+.+..++.++|||||||++|||++|+.||......+. ...+.
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH---LAMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH---HHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHH
Confidence 678999999999876543 334688999999999999999999999999999999999999975432111 11111
Q ss_pred HHhhh--------cccccccc---------------------ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006747 553 SVVRE--------EWTSEVFD---------------------VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603 (632)
Q Consensus 553 ~~~~~--------~~~~~~~d---------------------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl 603 (632)
..... ......+. +..............+.+++.+||+.||++|||+.|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 11000 00000000 00000011223456788999999999999999999998
Q ss_pred HH
Q 006747 604 RM 605 (632)
Q Consensus 604 ~~ 605 (632)
++
T Consensus 328 ~h 329 (339)
T 1z57_A 328 KH 329 (339)
T ss_dssp TS
T ss_pred cC
Confidence 64
No 179
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.6e-38 Score=327.69 Aligned_cols=256 Identities=25% Similarity=0.367 Sum_probs=191.6
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 367999999999999965 4899999998655433 34578999999999 899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
++|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 109 TILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp EHHHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred chHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 99998876432 488999999999999999999998 9999999999999999999999999999775432
Q ss_pred -CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCC-h--------hHHHHHHhhhccccc
Q 006747 494 -TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVD-L--------PRWVQSVVREEWTSE 562 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~ 562 (632)
....++..|+|||.+.+. .++.++|||||||++|||++|+.||......+... + +.+............
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 234578899999999876 68999999999999999999999997543211100 0 000000000000000
Q ss_pred cccccccccCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 563 VFDVELMRYENIE----EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 563 ~~d~~~~~~~~~~----~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
...+......... .....+.+++.+||+.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111110001111 123457888999999999999999998863
No 180
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6.6e-38 Score=321.57 Aligned_cols=242 Identities=20% Similarity=0.356 Sum_probs=193.6
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||++... +|+.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 467999999999999964 689999999976532 345688999999999 89999999999999999999999999999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee---cCCCCeEEcccCCCCCCCCCCC
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNTPTV 495 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~~~~ 495 (632)
|.+++.... ++++.....++.+++.||+|||+. +|+||||||+||++ ++++.+||+|||+++.......
T Consensus 93 L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 93 LFDRILERG-----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 999987542 478899999999999999999998 99999999999999 7889999999999976544321
Q ss_pred --CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 496 --PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 496 --~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
..+++.|+|||.+.+..++.++|||||||++|||++|+.||..... ....... .++... +... ...
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i-~~~~~~--~~~~--~~~- 232 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKLFEKI-KEGYYE--FESP--FWD- 232 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHH-HHCCCC--CCTT--TTT-
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHH-HcCCCC--CCcc--ccc-
Confidence 2378899999999999999999999999999999999999965321 1111111 111110 0000 001
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.....+.+++.+||+.||++|||+.|++++
T Consensus 233 --~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 233 --DISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --TSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 122457788889999999999999999873
No 181
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.5e-38 Score=338.36 Aligned_cols=242 Identities=22% Similarity=0.350 Sum_probs=184.1
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc---------CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEE
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM---------GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 410 (632)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++. .+..++|
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE-SSEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCceEEE
Confidence 467999999999999864 578999999975421 112478999999999 9999999999975 4568999
Q ss_pred EecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCC---CCeEEcccCCC
Q 006747 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLT 487 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~---~~~ki~DfGla 487 (632)
|||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 218 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecccc
Confidence 9999999999988754 2588999999999999999999998 99999999999999754 45999999999
Q ss_pred CCCCCCC---CCCCCCcccCCccccC---CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 006747 488 PLMNTPT---VPSRSAGYRAPEVIET---KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTS 561 (632)
Q Consensus 488 ~~~~~~~---~~~~t~~y~aPE~~~~---~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (632)
+...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .+... +......
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~----i~~~~~~ 363 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQ----ITSGKYN 363 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHH----HHTTCCC
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHH----HhcCCCC
Confidence 8876432 3458899999999864 567889999999999999999999997543221 11111 1111100
Q ss_pred ccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 562 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
..+.. .. .....+.+++.+||+.||++|||+.|++++
T Consensus 364 --~~~~~--~~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 --FIPEV--WA---EVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp --CCHHH--HT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --CCchh--hc---ccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000 00 112457788899999999999999999873
No 182
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6e-38 Score=330.46 Aligned_cols=242 Identities=19% Similarity=0.359 Sum_probs=193.3
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccC---------HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEE
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---------KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVY 411 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 411 (632)
+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++.++.+||||+++++++......++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 68999999999999975 6999999998654311 3457889999999877999999999999999999999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 180 e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 180 DLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 999999999999754 2488999999999999999999998 99999999999999999999999999987665
Q ss_pred CC---CCCCCCCcccCCccccC------CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccc
Q 006747 492 TP---TVPSRSAGYRAPEVIET------KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSE 562 (632)
Q Consensus 492 ~~---~~~~~t~~y~aPE~~~~------~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (632)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ........ .....
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~~~i~-~~~~~- 323 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILMLRMIM-EGQYQ- 323 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HTCCC-
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHH-hCCCC-
Confidence 43 23468899999999863 3578899999999999999999999965321 11111111 11100
Q ss_pred cccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 563 VFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 563 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
...+ .... ....+.+++.+||+.||++|||+.|++++
T Consensus 324 ~~~~---~~~~---~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 324 FSSP---EWDD---RSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCHH---HHSS---SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCc---cccc---CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 0011 12357788899999999999999999873
No 183
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=337.87 Aligned_cols=194 Identities=22% Similarity=0.397 Sum_probs=153.1
Q ss_pred HhHhCccceeEEEEEEEc---CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEe--CCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE---EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS--KDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~E~~~ 415 (632)
.++||+|+||.||+|... ++..||||++..... ...+.+|++++.++ +||||+++++++.. ....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 457999999999999965 478999999976533 35688999999999 89999999999965 567899999997
Q ss_pred CCCHhhhhccCC----CCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee----cCCCCeEEcccCCC
Q 006747 416 AGSFSALLHGNR----GIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL----SQDLQGCISDFGLT 487 (632)
Q Consensus 416 ~g~L~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl----~~~~~~ki~DfGla 487 (632)
+ +|.+++.... ......+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 5 7877775321 11223589999999999999999999998 99999999999999 77899999999999
Q ss_pred CCCCCC-------CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCC
Q 006747 488 PLMNTP-------TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPG 540 (632)
Q Consensus 488 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~ 540 (632)
+..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 876532 223578899999999874 48999999999999999999999997654
No 184
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=336.07 Aligned_cols=255 Identities=23% Similarity=0.355 Sum_probs=188.3
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCC------ceEEEE
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKD------EKLLVY 411 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv~ 411 (632)
+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++.++ +||||+++++++.... ..++||
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEEE
Confidence 5799999999999986 46899999999654332 35688999999999 8999999999998653 469999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+ +++|.+++... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp ECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 999 78999998753 378899999999999999999998 99999999999999999999999999998765
Q ss_pred CC-CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---cc-------
Q 006747 492 TP-TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE---EW------- 559 (632)
Q Consensus 492 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~------- 559 (632)
.. ....+|..|+|||.+.+ ..++.++||||+||++|||++|+.||.+....+. ...+...... ..
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~~~~~~~~~~~~~ 256 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ---LKEIMKVTGTPPAEFVQRLQSD 256 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHHHTCSCH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCCHHHHHHhhhH
Confidence 43 33467889999999887 6789999999999999999999999976432111 0000000000 00
Q ss_pred --------ccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhhCCC
Q 006747 560 --------TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDIRPS 612 (632)
Q Consensus 560 --------~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i~~~ 612 (632)
.......... .........+.+++.+||+.||++|||+.|++++ ++++...
T Consensus 257 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~ 317 (367)
T 1cm8_A 257 EAKNYMKGLPELEKKDFA--SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 317 (367)
T ss_dssp HHHHHHHHSCCCCCCCGG--GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred HHHHHHHhCCCCCCCCHH--HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCC
Confidence 0000000000 0001123457788899999999999999999984 5555433
No 185
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=329.43 Aligned_cols=252 Identities=23% Similarity=0.403 Sum_probs=196.9
Q ss_pred HhHhCccceeEEEEEEE-----cCCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEeCC--ceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAIL-----EEGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD--EKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~E 412 (632)
.+.||+|+||.||++.. .+++.||||++..... ..+.+.+|++++.++ +||||+++++++...+ ..++|||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEE
Confidence 36799999999999984 3688999999976432 246799999999999 8999999999987654 6899999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 492 (632)
|+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999997643 3588999999999999999999998 999999999999999999999999999977654
Q ss_pred CC-------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCC--------CCCCCC-hhHHHHHHhh
Q 006747 493 PT-------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPG--------HEDVVD-LPRWVQSVVR 556 (632)
Q Consensus 493 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~--------~~~~~~-~~~~~~~~~~ 556 (632)
.. ...++..|+|||.+.+..++.++|||||||++|||+||+.|+.... ...... ........+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 32 2235667999999998889999999999999999999999875321 000000 0001111111
Q ss_pred hccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhC
Q 006747 557 EEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610 (632)
Q Consensus 557 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 610 (632)
.... . ........++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 278 ~~~~-------~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 278 NNGR-------L---PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp TTCC-------C---CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCC-------C---CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1100 0 011112345778889999999999999999999999875
No 186
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.4e-38 Score=331.82 Aligned_cols=253 Identities=21% Similarity=0.279 Sum_probs=190.9
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc---CHHHHHHHHHHHHhhcCCCCccceeEEEEeC--------CceE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM---GKREFEQQMEVVGRLSQHPNVVPIRAYYFSK--------DEKL 408 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------~~~~ 408 (632)
.+.||+|+||.||+|.. .+|+.||+|++..... ....+.+|++++.++ +||||+++++++... +..+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCCceEE
Confidence 36799999999999996 5689999999865432 245788999999999 899999999999874 4689
Q ss_pred EEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 409 lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
+||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 101 lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 99999985 7777776542 3488999999999999999999998 99999999999999999999999999997
Q ss_pred CCCCC--------CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh--
Q 006747 489 LMNTP--------TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE-- 557 (632)
Q Consensus 489 ~~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 557 (632)
..... ....+|+.|+|||.+.+. .++.++|||||||++|||+||+.||.+....+. ...+......
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~~ 249 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ---LALISQLCGSIT 249 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCC
Confidence 65421 223478889999998764 579999999999999999999999976432111 1111111100
Q ss_pred -ccccccccccc--------cccCCcHHH------HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 558 -EWTSEVFDVEL--------MRYENIEEE------MVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 558 -~~~~~~~d~~~--------~~~~~~~~~------~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
......-.... .......+. ...+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000000 000111121 1347789999999999999999999874
No 187
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=324.99 Aligned_cols=243 Identities=22% Similarity=0.322 Sum_probs=192.4
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEeccccc-CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM-GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
.+||+|+||.||+|.. .++..||||.+..... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 4799999999999995 5688999999976533 356789999999999 899999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC-CCCeEEcccCCCCCCCCC----C
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ-DLQGCISDFGLTPLMNTP----T 494 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~-~~~~ki~DfGla~~~~~~----~ 494 (632)
.+++.... +...+++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+|||+++..... .
T Consensus 107 ~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 107 SALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 99997653 234567888999999999999999998 9999999999999998 899999999999766432 2
Q ss_pred CCCCCCcccCCccccCCC--CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 495 VPSRSAGYRAPEVIETKK--PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 495 ~~~~t~~y~aPE~~~~~~--~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
...++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... ........ .... +.+ ..
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~-~~~~-----~~~--~~ 249 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AAMFKVGM-FKVH-----PEI--PE 249 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HHHHHHHH-HCCC-----CCC--CT
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HHHHhhcc-cccc-----ccc--cc
Confidence 345788999999997654 7899999999999999999999996432110 00000000 0000 011 01
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.....+.+++.+||+.||++|||+.|++++
T Consensus 250 ---~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 250 ---SMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ---TSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ---cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 112356778889999999999999999863
No 188
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.2e-38 Score=324.26 Aligned_cols=249 Identities=20% Similarity=0.285 Sum_probs=191.2
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEe--CCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS--KDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|.. .+++.||||+++. ...+.+.+|++++.++.+||||+++++++.. ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 36799999999999985 5689999999974 3467899999999999559999999999998 56789999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC-CeEEcccCCCCCCCCC---
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL-QGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~-~~ki~DfGla~~~~~~--- 493 (632)
+|.+++.. +++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 119 ~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQT--------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 99998852 67888999999999999999998 999999999999999776 8999999999765433
Q ss_pred CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHH--------Hhhhccccccc
Q 006747 494 TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQS--------VVREEWTSEVF 564 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 564 (632)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+...... .+..... ..
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~--~~ 264 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKYNI--EL 264 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHTTC--CC
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHHHhcc--cc
Confidence 23457888999999987 66899999999999999999999999543211 0011110000 0000000 00
Q ss_pred ccc---------------ccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 565 DVE---------------LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 565 d~~---------------~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
++. .............+.+++.+||+.||++|||++|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 00000111123457788999999999999999999873
No 189
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.2e-38 Score=331.97 Aligned_cols=190 Identities=22% Similarity=0.383 Sum_probs=166.5
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
+.||+|+||.||++... ++..||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 57999999999999965 689999999976422 245788999999999 89999999999999999999999999999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC--CCCC
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT--PTVP 496 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--~~~~ 496 (632)
|.+++.... .+++.....++.+++.||+|||+.. +|+||||||+||+++.++.+||+|||+++.... ....
T Consensus 118 L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 118 LDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence 999997643 4788999999999999999999842 799999999999999999999999999865422 2334
Q ss_pred CCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCC
Q 006747 497 SRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539 (632)
Q Consensus 497 ~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~ 539 (632)
.+|+.|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 6889999999999999999999999999999999999999754
No 190
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=322.97 Aligned_cols=242 Identities=25% Similarity=0.412 Sum_probs=190.0
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEe------CCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS------KDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|.. .+++.||||++.........+.+|++++.++.+||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 36799999999999996 4689999999987666678899999999999789999999999987 4578999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+++|+|.+++.... ...+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 99999999997642 23588899999999999999999998 9999999999999999999999999999876432
Q ss_pred ----CCCCCCCcccCCcccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 494 ----TVPSRSAGYRAPEVIE-----TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 494 ----~~~~~t~~y~aPE~~~-----~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
....++..|+|||.+. +..++.++|||||||++|||+||+.||..... ........... .....
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~~~~~ 255 (326)
T 2x7f_A 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------MRALFLIPRNP-APRLK 255 (326)
T ss_dssp --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC-CCCCS
T ss_pred ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHhhcCc-cccCC
Confidence 2335788999999987 56689999999999999999999999964321 11111111111 11000
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.... ...+.+++.+||+.||++|||+.++++
T Consensus 256 ------~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 256 ------SKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ------CSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ------cccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0111 235677888999999999999999987
No 191
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.3e-38 Score=357.16 Aligned_cols=238 Identities=21% Similarity=0.281 Sum_probs=195.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEV----VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... +++.||||++++. ....+.+..|.+++..+.+||||+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 367999999999999965 5788999999754 23346688899999988789999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC---
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT--- 492 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~--- 492 (632)
+|+|.++++... .+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++....
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 999999998643 488999999999999999999998 999999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 493 -PTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 493 -~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
.....||+.|+|||++.+..|+.++|||||||++|||++|+.||.+... ......+..... .-.
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~---------~~p 562 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHNV---------AYP 562 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHSSCC---------CCC
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCCC---------CCC
Confidence 2334689999999999999999999999999999999999999975321 122222222111 001
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTM-----EEVVR 604 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~-----~evl~ 604 (632)
.. ...++.+|+.+||+.||++||++ +||++
T Consensus 563 ~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 KS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TT---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred cc---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11 22356778889999999999997 66654
No 192
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.5e-38 Score=334.50 Aligned_cols=194 Identities=21% Similarity=0.303 Sum_probs=166.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCC-----ccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN-----VVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n-----iv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|... +++.||||+++........+..|++++..+.+|++ |+++++++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 367999999999999865 57899999998654445677888888888855664 999999999999999999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec--CCCCeEEcccCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS--QDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~--~~~~~ki~DfGla~~~~~ 492 (632)
+ |+|.+++.... ...+++..+..++.|++.||+|||++ ..+|+||||||+|||++ +++.+||+|||+++....
T Consensus 139 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 139 S-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp C-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 6 59999987653 23488999999999999999999952 23899999999999995 578899999999987654
Q ss_pred C-CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCC
Q 006747 493 P-TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAP 539 (632)
Q Consensus 493 ~-~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~ 539 (632)
. ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.+.
T Consensus 214 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 214 RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3 3446889999999999999999999999999999999999999754
No 193
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.6e-37 Score=318.54 Aligned_cols=239 Identities=24% Similarity=0.393 Sum_probs=196.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++.++ +||||+++++++......++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 35799999999999985 468899999997543 3457899999999999 9999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.+++... ++++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 106 ~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 106 SALDLLEPG------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp EHHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred cHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 999998643 488999999999999999999998 9999999999999999999999999999765432
Q ss_pred CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 494 TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
....++..|+|||.+.+..++.++||||||+++|||++|+.||..... ..... ......... +. ..
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~-~~~~~~~~~-~~------~~ 242 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP------MKVLF-LIPKNNPPT-LE------GN 242 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHH-HHHHSCCCC-CC------SS
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH------HHHHH-HhhcCCCCC-Cc------cc
Confidence 233578889999999999999999999999999999999999964321 11111 111111110 00 11
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMI 606 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L 606 (632)
....+.+++.+||+.||++|||+.|++++.
T Consensus 243 ---~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 243 ---YSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ---CCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ---cCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 123477888899999999999999998853
No 194
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.4e-37 Score=340.32 Aligned_cols=245 Identities=21% Similarity=0.319 Sum_probs=196.5
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccc---ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEV---VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||++... +++.||||++... ......+.+|++++.++ +||||+++++++.+....++||||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 468999999999999964 6899999999653 23467899999999999 999999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec---CCCCeEEcccCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS---QDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~---~~~~~ki~DfGla~~~~~~ 493 (632)
|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 106 GELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 99999887542 488999999999999999999998 999999999999995 4668999999999876543
Q ss_pred ---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 494 ---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
....+|+.|+|||++.+ .++.++||||+||++|||++|+.||.+... .............. ....
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~-----~~~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAF-----DLPQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCS-----CSGG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC-----CCcc
Confidence 23458899999999876 589999999999999999999999975321 11112211111110 0001
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhh
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDI 609 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i 609 (632)
+.. ....+.+++.+||+.||++|||+.|++++ ++..
T Consensus 246 ~~~---~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 246 WRT---ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp GGG---SCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred cCC---CCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 111 12346788889999999999999999985 5554
No 195
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.1e-37 Score=329.38 Aligned_cols=259 Identities=19% Similarity=0.270 Sum_probs=193.9
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhc----------CCCCccceeEEEEeCC----
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLS----------QHPNVVPIRAYYFSKD---- 405 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~----------~h~niv~l~~~~~~~~---- 405 (632)
.+.||+|+||.||+|.. .+++.||||++.........+.+|++++.++. .|+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 36799999999999985 56899999999865444567889999988873 2899999999998654
Q ss_pred ceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec------CCCCe
Q 006747 406 EKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS------QDLQG 479 (632)
Q Consensus 406 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~------~~~~~ 479 (632)
..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++ .++.+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~~ 177 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQI 177 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcceE
Confidence 689999999 889999997643 234889999999999999999999853 899999999999994 44589
Q ss_pred EEcccCCCCCCCCC-CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh--
Q 006747 480 CISDFGLTPLMNTP-TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVR-- 556 (632)
Q Consensus 480 ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-- 556 (632)
||+|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|||+||+.||....................
T Consensus 178 kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (373)
T 1q8y_A 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257 (373)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred EEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc
Confidence 99999999776543 344688999999999999999999999999999999999999976543221111111111110
Q ss_pred -h--------c-ccccccc----------cc--------ccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 557 -E--------E-WTSEVFD----------VE--------LMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 557 -~--------~-~~~~~~d----------~~--------~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
. . +....+. .. .............+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 0 0 0000000 00 00112234556778899999999999999999999883
No 196
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.6e-38 Score=328.13 Aligned_cols=251 Identities=21% Similarity=0.335 Sum_probs=195.4
Q ss_pred HhHhCccceeEEEEEEE------cCCcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAIL------EEGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|.. .++..||||++.... .....+.+|+.++.++ +||||+++++++...+..++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEe
Confidence 36799999999999983 347789999997542 2245788999999999 99999999999999999999999
Q ss_pred cccCCCHhhhhccCCCC--CCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC---CCCeEEcccCCC
Q 006747 413 FIEAGSFSALLHGNRGI--GRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---DLQGCISDFGLT 487 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla 487 (632)
|+++|+|.+++...... ....+++..+..++.+++.||+|||+. +|+||||||+|||++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999865321 124588999999999999999999998 9999999999999994 456999999998
Q ss_pred CCCCCC------CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 488 PLMNTP------TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 488 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
+..... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||..... ....... .....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~-~~~~~ 263 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFV-TSGGR 263 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHH-HTTCC
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH------HHHHHHH-hcCCC
Confidence 643221 22346778999999998899999999999999999999 9999865321 1111111 11111
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCC
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS 612 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 612 (632)
.. ... .....+.+++.+||+.||++|||+.+++++|+.+...
T Consensus 264 ~~-------~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 264 MD-------PPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp CC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC-------CCC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 00 001 1223577888999999999999999999999987544
No 197
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.1e-37 Score=316.53 Aligned_cols=245 Identities=22% Similarity=0.335 Sum_probs=198.3
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 367999999999999965 57889999996532 2356789999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 98 RGELYKELQKHG-----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999997542 488899999999999999999998 9999999999999999999999999998655432
Q ss_pred CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCC
Q 006747 494 TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYEN 573 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 573 (632)
....++..|+|||.+.+..++.++||||||+++|||++|+.||..... ............ .. ...
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~-------~~--~~~ 234 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TETHRRIVNVDL-------KF--PPF 234 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCC-------CC--CTT
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHHHHHHhcccc-------CC--CCc
Confidence 234578899999999999999999999999999999999999965321 111111111100 00 011
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhhCCC
Q 006747 574 IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR--MIEDIRPS 612 (632)
Q Consensus 574 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i~~~ 612 (632)
. ...+.+++.+||+.||++|||+.|+++ .++.....
T Consensus 235 ~---~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~ 272 (284)
T 2vgo_A 235 L---SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272 (284)
T ss_dssp S---CHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCC
T ss_pred C---CHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccc
Confidence 1 234677888999999999999999987 45554433
No 198
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=331.87 Aligned_cols=250 Identities=21% Similarity=0.302 Sum_probs=190.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC------HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG------KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.+.||+|+||.||+|... +|+.||||+++..... .+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceEEEEEc
Confidence 467999999999999964 5899999999753221 24678999999999 899999999999999999999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+++ +|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 94 MET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred CCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 986 8888887542 3577888999999999999999998 9999999999999999999999999999876432
Q ss_pred ----CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------ccccc
Q 006747 494 ----TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE------EWTSE 562 (632)
Q Consensus 494 ----~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 562 (632)
....+|+.|+|||.+.+. .++.++|||||||++|||++|..||.+... .......... ....+
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD------LDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCTTTSSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHHHcCCCChhhhhh
Confidence 234578899999999764 479999999999999999999999865321 1111111111 00000
Q ss_pred ccc-cccc---c-cCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 563 VFD-VELM---R-YENI-----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 563 ~~d-~~~~---~-~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
... +... . .... ......+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 0000 0 0000 1112457788999999999999999999885
No 199
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.9e-38 Score=321.13 Aligned_cols=245 Identities=22% Similarity=0.316 Sum_probs=193.5
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEe--CCceEEEEeccc
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFS--KDEKLLVYDFIE 415 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~E~~~ 415 (632)
+.||+|+||.||++... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.. ....++||||++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 57999999999999864 6899999999765332 45688999999999 89999999998865 567899999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCC-----ceecCCCCCCeeecCCCCeEEcccCCCCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK-----FILGNIKSSNVLLSQDLQGCISDFGLTPLM 490 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 490 (632)
+|+|.+++..... ....+++..+..++.+++.||+|||+. + |+||||||+||++++++.+||+|||+++..
T Consensus 91 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 91 GGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp TEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 9999999875421 234589999999999999999999998 6 999999999999999999999999998766
Q ss_pred CCCCC----CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 491 NTPTV----PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 491 ~~~~~----~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
..... ..++..|+|||.+.+..++.++||||||+++|||+||+.||..... .... ..+..+.....
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~-~~i~~~~~~~~--- 236 (279)
T 2w5a_A 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KELA-GKIREGKFRRI--- 236 (279)
T ss_dssp ---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHHHTCCCCC---
T ss_pred ccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HHHH-HHHhhcccccC---
Confidence 54321 2478889999999998999999999999999999999999965321 1111 11122211110
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIED 608 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~ 608 (632)
.. .....+.+++.+||+.||++|||+.|+++++..
T Consensus 237 ----~~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 237 ----PY---RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp ----CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ----Cc---ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 01 112357788889999999999999999987654
No 200
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.2e-38 Score=324.66 Aligned_cols=250 Identities=23% Similarity=0.378 Sum_probs=188.3
Q ss_pred HhHhCccceeEEEEEEEc--CCc--EEEEEEeccccc----CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE--EGT--TVVVKRLKEVVM----GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~--~~~--~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|... ++. .||||+++.... ..+.+.+|++++.++ +||||+++++++.... .++|+|
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEe
Confidence 367999999999999853 233 689999875421 246788999999999 8999999999997754 899999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 492 (632)
|+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 101 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred cccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999997542 3488999999999999999999998 999999999999999999999999999977643
Q ss_pred CC-------CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 493 PT-------VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 493 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
.. ...++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ..............
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~~~--- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKIDKEGERL--- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTSCCCC---
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHHHHccCCCC---
Confidence 32 2235668999999988889999999999999999999 9999965321 12222221111110
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCCC
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSE 615 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~ 615 (632)
.........+.+++.+||+.||++|||+.++++.|+++.+....
T Consensus 245 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 288 (291)
T 1u46_A 245 -------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288 (291)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred -------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchh
Confidence 00111224577888999999999999999999999998776543
No 201
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.6e-37 Score=313.86 Aligned_cols=238 Identities=20% Similarity=0.331 Sum_probs=188.5
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEEeccC
Confidence 357999999999999975 68999999996532 2356789999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC-
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT- 494 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~- 494 (632)
+++|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 95 GGELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp SCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 999999997542 478899999999999999999998 99999999999999999999999999998765432
Q ss_pred --CCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 495 --VPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 495 --~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
...+++.|+|||.+.+..+ +.++||||||+++|||++|+.||.... ....... +...... ..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~-~~~~~~~--------~~ 231 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKK-IRGGVFY--------IP 231 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHH-HHHCCCC--------CC
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHH-hhcCccc--------Cc
Confidence 3357888999999988765 689999999999999999999996432 1111111 1111100 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.. ....+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~---~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 EY---LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hh---cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11 12346778889999999999999999984
No 202
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2e-37 Score=316.30 Aligned_cols=238 Identities=21% Similarity=0.339 Sum_probs=194.5
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM----GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||++... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEEecCC
Confidence 367999999999999975 478899999875432 245688899999999 99999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC--
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP-- 493 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~-- 493 (632)
+++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 99 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 99 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999988754 2488999999999999999999998 9999999999999999999999999999765422
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....++..|+|||.+.+..++.++||||||+++|||++|+.||.... ............. . ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~-------~--~~ 235 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEY-------S--IP 235 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCC-------C--CC
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhhccC-------C--Cc
Confidence 23357889999999999889999999999999999999999996532 1111111111110 0 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
... ...+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~---~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 KHI---NPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccc---CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111 2346678889999999999999999984
No 203
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.8e-38 Score=326.20 Aligned_cols=237 Identities=21% Similarity=0.341 Sum_probs=194.1
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM----GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||++... +++.||+|++..... ..+.+.+|++++.++ +|+||+++++++.+.+..++||||+++
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 57999999999999965 478999999875432 245688999999999 999999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 126 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 197 (335)
T 2owb_A 126 RSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197 (335)
T ss_dssp CBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred CCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCccc
Confidence 9999998754 2488999999999999999999998 9999999999999999999999999999765422
Q ss_pred -CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccC
Q 006747 494 -TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE 572 (632)
Q Consensus 494 -~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 572 (632)
....++..|+|||.+.+..++.++|||||||++|||++|+.||.... .............. ...
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~---------~~~ 262 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEYS---------IPK 262 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCC---------CCT
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhcCCCC---------CCc
Confidence 23357889999999999999999999999999999999999996432 11111111111100 001
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.. ...+.+++.+||+.||++|||+.|++++
T Consensus 263 ~~---~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 263 HI---NPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 2346678889999999999999999973
No 204
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.8e-38 Score=322.05 Aligned_cols=240 Identities=25% Similarity=0.391 Sum_probs=191.2
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
.+.||+|+||.||+|... +|+.||+|++.... ....+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 357999999999999865 48999999997643 356789999999999 999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----CC
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP----TV 495 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~----~~ 495 (632)
.+++... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 112 SDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp HHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 9998632 23588999999999999999999998 9999999999999999999999999999765432 23
Q ss_pred CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcH
Q 006747 496 PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIE 575 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 575 (632)
..++..|+|||.+.+..++.++||||||+++|||++|+.||..... ....... ........ ....
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~-~~~~~~~~--------~~~~ 249 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP------MRAIFMI-PTNPPPTF--------RKPE 249 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHH-HHSCCCCC--------SSGG
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHH-hcCCCccc--------CCcc
Confidence 4578889999999999999999999999999999999999964321 1111111 11111000 0011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 576 EEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 576 ~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.....+.+++.+||+.||++|||+.++++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11245778889999999999999999986
No 205
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.7e-38 Score=342.42 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=197.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEeccc
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEV----VMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIE 415 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~ 415 (632)
.+.||+|+||.||++... +++.||||++... ....+.+.+|++++.++ +||||+++++++.+.+..++||||+.
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 467999999999999965 6899999999654 23467899999999999 89999999999999999999999999
Q ss_pred CCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee---cCCCCeEEcccCCCCCCCC
Q 006747 416 AGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL---SQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 416 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl---~~~~~~ki~DfGla~~~~~ 492 (632)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 110 ~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 110 GGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp SCBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999987542 488999999999999999999998 99999999999999 5678999999999976654
Q ss_pred CCC---CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 493 PTV---PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 493 ~~~---~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
... ..+|+.|+|||.+.+ .++.++||||+||++|||++|+.||.+... .............. ...
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~-----~~~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE------YDILKKVEKGKYTF-----ELP 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC-----CSG
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCCC-----CCc
Confidence 332 358899999999876 689999999999999999999999975321 11112211111110 001
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhh
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR--MIEDI 609 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i 609 (632)
.+.. ....+.+++.+||+.||++|||+.|+++ .++..
T Consensus 250 ~~~~---~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 250 QWKK---VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp GGGG---SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred cccc---CCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 1111 1235678888999999999999999987 34444
No 206
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8.5e-39 Score=332.16 Aligned_cols=252 Identities=20% Similarity=0.292 Sum_probs=184.2
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEecCCC
Confidence 36799999999999985 46889999999754322 34678999999999 899999999999999999999999985
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee-----cCCCCeEEcccCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL-----SQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl-----~~~~~~ki~DfGla~~~~ 491 (632)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 118 -~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 118 -DLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp -EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred -CHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9999987643 488999999999999999999998 99999999999999 455669999999987654
Q ss_pred CC----CCCCCCCcccCCccccCCC-CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh--hhccccccc
Q 006747 492 TP----TVPSRSAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVV--REEWTSEVF 564 (632)
Q Consensus 492 ~~----~~~~~t~~y~aPE~~~~~~-~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 564 (632)
.. ....+|..|+|||.+.+.. ++.++|||||||++|||++|+.||......+. +........ .+.......
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSTTGG
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHHHHHHhCCCchhhhhhhh
Confidence 22 2335788999999998754 89999999999999999999999975321110 111111000 000000000
Q ss_pred -----ccccc--ccCCcHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 565 -----DVELM--RYENIEE-----EMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 565 -----d~~~~--~~~~~~~-----~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
..... ....... ...++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000 0001111 1245678899999999999999999986
No 207
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.1e-38 Score=323.41 Aligned_cols=246 Identities=19% Similarity=0.320 Sum_probs=189.2
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM---GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|...+ .||+|+++.... ..+.+.+|++++.++ +||||+++++++...+..++||||++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeecccCC
Confidence 3679999999999998753 599999875422 234577899999999 8999999999999999999999999999
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 115 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 115 TLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp EHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 9999997642 3588899999999999999999998 999999999999998 689999999998765321
Q ss_pred -----CCCCCCCcccCCccccC---------CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006747 494 -----TVPSRSAGYRAPEVIET---------KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559 (632)
Q Consensus 494 -----~~~~~t~~y~aPE~~~~---------~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (632)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...... .....
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~-~~~~~ 259 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA------EAIIWQ-MGTGM 259 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH------HHHHHH-HHTTC
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH-hccCC
Confidence 12247788999999875 3478899999999999999999999965321 111111 11111
Q ss_pred ccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCC
Q 006747 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSD 613 (632)
Q Consensus 560 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 613 (632)
....... . ....+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 260 ~~~~~~~------~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 260 KPNLSQI------G---MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCCS------S---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCcC------C---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111000 1 1124678888999999999999999999999997664
No 208
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.8e-37 Score=340.11 Aligned_cols=241 Identities=22% Similarity=0.354 Sum_probs=189.6
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.++ +|||||+++++|.+....++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 467999999999999965 68899999997643 2356789999999999 899999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC---CCCeEEcccCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---DLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~~ 493 (632)
|+|.+++.... ++++.....++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 121 g~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 121 GELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 99999887542 488899999999999999999998 9999999999999976 456999999999766433
Q ss_pred ---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 494 ---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
....+|+.|+|||++. ..++.++||||+||++|||++|+.||.+... ............. ++.. .
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~---~~~~--~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QEILRKVEKGKYT---FDSP--E 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC---CCSG--G
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC---CCch--h
Confidence 3346899999999986 5689999999999999999999999975321 1122222111111 0000 1
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
+... ...+.+++.+||+.||++|||+.|++++
T Consensus 261 ~~~~---s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 WKNV---SEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cccC---CHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1111 2346678889999999999999999863
No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.4e-38 Score=321.85 Aligned_cols=249 Identities=20% Similarity=0.346 Sum_probs=190.5
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM---GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
+.||+|+||.||+|... +++.||||+++.... ..+.+.+|++++.++ +||||+++++++...+..++||||++ |
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 57999999999999965 689999999975432 236788999999999 89999999999999999999999998 5
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC----
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---- 493 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---- 493 (632)
+|.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 160 (299)
T 2r3i_A 87 DLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160 (299)
T ss_dssp EHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred CHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcccc
Confidence 9999987653 23478899999999999999999998 9999999999999999999999999998654322
Q ss_pred CCCCCCCcccCCccccCCC-CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh-cccccc--------
Q 006747 494 TVPSRSAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE-EWTSEV-------- 563 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~-~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------- 563 (632)
....++..|+|||.+.+.. ++.++|||||||++|||+||+.||...... ......... +...+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 161 THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------DQLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHHHhCCCchhhhhHhhcC
Confidence 2335788899999998765 799999999999999999999999754311 111111110 000000
Q ss_pred --cccccccc--CCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 564 --FDVELMRY--ENI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 564 --~d~~~~~~--~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
..+..... ... .....++.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 000 011245678889999999999999999987
No 210
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.1e-37 Score=326.09 Aligned_cols=250 Identities=16% Similarity=0.233 Sum_probs=195.2
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCH------------------HHHHHHHHHHHhhcCCCCccceeEEEE
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGK------------------REFEQQMEVVGRLSQHPNVVPIRAYYF 402 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~------------------~~~~~e~~~l~~l~~h~niv~l~~~~~ 402 (632)
.+.||+|+||.||+|.. +++.||+|++....... +.+.+|++++.++ +||||+++++++.
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 113 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCCCSEEEE
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence 36799999999999999 89999999997542211 7899999999999 8999999999999
Q ss_pred eCCceEEEEecccCCCHhhh------hccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHh-ccCCCceecCCCCCCeeecC
Q 006747 403 SKDEKLLVYDFIEAGSFSAL------LHGNRGIGRTPLDWESRVKISLGSAKGIAHIHA-AVGGKFILGNIKSSNVLLSQ 475 (632)
Q Consensus 403 ~~~~~~lv~E~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrDlk~~NILl~~ 475 (632)
+.+..++||||+++|+|.++ +... ...++++..+..++.+++.||+|||+ . +|+||||||+||+++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDK 187 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECT
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcC
Confidence 99999999999999999998 5432 13568999999999999999999998 7 9999999999999999
Q ss_pred CCCeEEcccCCCCCCCCC--CCCCCCCcccCCccccCC-CCCc-cchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 006747 476 DLQGCISDFGLTPLMNTP--TVPSRSAGYRAPEVIETK-KPTQ-KSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWV 551 (632)
Q Consensus 476 ~~~~ki~DfGla~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 551 (632)
++.+||+|||+++..... ....++..|+|||.+.+. .++. ++|||||||++|||++|+.||...... ....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHH
Confidence 999999999999765432 334588899999999887 5666 999999999999999999999754321 1111
Q ss_pred HHHhhhcccccccc-----cccccc---CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 552 QSVVREEWTSEVFD-----VELMRY---ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 552 ~~~~~~~~~~~~~d-----~~~~~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.... ........+ ...... .........+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 NNIR-TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHT-SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHh-ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 111000000 000000 000112345778889999999999999999987
No 211
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.6e-37 Score=341.43 Aligned_cols=241 Identities=24% Similarity=0.358 Sum_probs=191.3
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc--------------cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV--------------MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD 405 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~ 405 (632)
.+.||+|+||.||+|... ++..||+|+++... ...+.+.+|++++.++ +||||+++++++.+..
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence 367999999999999965 57899999997543 2246789999999999 8999999999999999
Q ss_pred ceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC---CeEEc
Q 006747 406 EKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL---QGCIS 482 (632)
Q Consensus 406 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~---~~ki~ 482 (632)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEE
Confidence 9999999999999999987542 488999999999999999999998 999999999999999876 69999
Q ss_pred ccCCCCCCCCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006747 483 DFGLTPLMNTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559 (632)
Q Consensus 483 DfGla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (632)
|||+++..... ....+|+.|+|||++. +.++.++||||+||++|||++|+.||.+... ............
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~ 264 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND------QDIIKKVEKGKY 264 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCC
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCC
Confidence 99999876543 3346899999999987 4689999999999999999999999975321 111222111111
Q ss_pred ccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 560 TSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 560 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
. ++ ...+... ...+.+++.+||+.||++|||+.|++++
T Consensus 265 ~---~~--~~~~~~~---s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 Y---FD--FNDWKNI---SDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C---CC--HHHHTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---CC--ccccCCC---CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 00 0001111 2356788889999999999999999873
No 212
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2e-37 Score=325.77 Aligned_cols=263 Identities=18% Similarity=0.271 Sum_probs=182.4
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCc-------eEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDE-------KLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-------~~lv~E 412 (632)
.+.||+|+||.||+|... +++.||||++.........+.++++.+..+ +||||+++++++..... .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeEEEEee
Confidence 367999999999999964 589999999876554455677788888888 89999999999976543 789999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHH--hccCCCceecCCCCCCeeecC-CCCeEEcccCCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH--AAVGGKFILGNIKSSNVLLSQ-DLQGCISDFGLTPL 489 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivHrDlk~~NILl~~-~~~~ki~DfGla~~ 489 (632)
|+++ +|...+..... ....+++.....++.+++.||.||| +. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 107 ~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred cccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 9987 54444332110 2235788899999999999999999 66 9999999999999997 89999999999987
Q ss_pred CCCCC---CCCCCCcccCCccccCCC-CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHH-----------H
Q 006747 490 MNTPT---VPSRSAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQS-----------V 554 (632)
Q Consensus 490 ~~~~~---~~~~t~~y~aPE~~~~~~-~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-----------~ 554 (632)
..... ...+|..|+|||.+.+.. ++.++|||||||++|||+||+.||......+. +...++. .
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH--HHHHHHHcCCCCHHHHHhc
Confidence 65432 335788999999987655 89999999999999999999999976432111 1111110 0
Q ss_pred hhhcccccccccccc-----ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhhCC
Q 006747 555 VREEWTSEVFDVELM-----RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDIRP 611 (632)
Q Consensus 555 ~~~~~~~~~~d~~~~-----~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i~~ 611 (632)
..........+.... ...........+.+++.+||+.||++|||+.|++++ ++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 000000000000000 000011134567889999999999999999999984 666644
No 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.6e-37 Score=328.05 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=184.2
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCC------ceEEE
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKD------EKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv 410 (632)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccccccceEEE
Confidence 367999999999999854 5889999999764332 35688999999999 8999999999998654 67999
Q ss_pred EecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCC
Q 006747 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM 490 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 490 (632)
|||+++ +|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 999985 78888753 278899999999999999999998 9999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCC---------ChhHH-------H
Q 006747 491 NTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVV---------DLPRW-------V 551 (632)
Q Consensus 491 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~---------~~~~~-------~ 551 (632)
... ....+|..|+|||.+.+..++.++|||||||++|||++|+.||.+....+.. ..+.+ +
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 543 2345788999999999999999999999999999999999999764321100 00000 0
Q ss_pred HHHhhhccc--cc----cccccccccC--CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 552 QSVVREEWT--SE----VFDVELMRYE--NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 552 ~~~~~~~~~--~~----~~d~~~~~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
......... .. .+........ ........+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000 00 0000000000 011224568899999999999999999999884
No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.5e-38 Score=325.68 Aligned_cols=253 Identities=24% Similarity=0.372 Sum_probs=177.9
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccc--cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV--MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 36799999999999985 468999999987542 2346688899999999 8999999999999999999999999999
Q ss_pred CHhhhhccCC---CCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC-
Q 006747 418 SFSALLHGNR---GIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP- 493 (632)
Q Consensus 418 ~L~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~- 493 (632)
+|.+++.... ......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999986421 11234589999999999999999999998 9999999999999999999999999998654322
Q ss_pred --------CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 494 --------TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 494 --------~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... . ........ ....
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~~~~~~-~~~~- 247 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK---V---LMLTLQND-PPSL- 247 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---H---HHHHHTSS-CCCT-
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh---H---HHHHhccC-CCcc-
Confidence 12347888999999876 568999999999999999999999997533211 1 11111111 0000
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
................+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000000001112356788889999999999999999873
No 215
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.5e-38 Score=336.54 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=183.3
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHhh
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA 421 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~ 421 (632)
+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++.+|||||++++++.+.+..++||||+. |+|.+
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~ 97 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQD 97 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHH
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHH
Confidence 5799999999987777789999999986532 45678899999887689999999999999999999999996 69999
Q ss_pred hhccCCCCCCC--cCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCC-------------CCeEEcccCC
Q 006747 422 LLHGNRGIGRT--PLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD-------------LQGCISDFGL 486 (632)
Q Consensus 422 ~l~~~~~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~-------------~~~ki~DfGl 486 (632)
++......... ...+..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~ 174 (434)
T 2rio_A 98 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174 (434)
T ss_dssp HHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred HHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence 99865321110 112334578999999999999998 99999999999999754 5899999999
Q ss_pred CCCCCCCC--------CCCCCCcccCCccccC-------CCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHH
Q 006747 487 TPLMNTPT--------VPSRSAGYRAPEVIET-------KKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRW 550 (632)
Q Consensus 487 a~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 550 (632)
++...... ...+|++|+|||++.+ ..++.++|||||||++|||+| |+.||......+
T Consensus 175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------- 247 (434)
T 2rio_A 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------- 247 (434)
T ss_dssp CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-------
T ss_pred ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-------
Confidence 98765432 2358899999999976 568999999999999999999 999996432110
Q ss_pred HHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 551 VQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 551 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
........... .. ..........++.+++.+||+.||++|||+.|+++
T Consensus 248 -~~i~~~~~~~~----~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 -SNIIRGIFSLD----EM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHHHTCCCCC----CC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHhcCCCCcc----cc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111111000 00 11112334566888999999999999999999986
No 216
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.6e-38 Score=334.90 Aligned_cols=251 Identities=21% Similarity=0.319 Sum_probs=174.6
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeC------CceEEE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSK------DEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 410 (632)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++.++ +||||+++++++... ...++|
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEE
Confidence 36799999999999985 56899999999754332 45688999999999 899999999999754 567999
Q ss_pred EecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCC
Q 006747 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM 490 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 490 (632)
+||+ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 113 THLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp EECC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eccc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 9999 67999888642 488999999999999999999998 9999999999999999999999999999876
Q ss_pred CCC-CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---cccccccc
Q 006747 491 NTP-TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE---EWTSEVFD 565 (632)
Q Consensus 491 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d 565 (632)
... ....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+. ...+...... .....+..
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ---LKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHTTCCC
T ss_pred cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHhhh
Confidence 543 33468899999999987 6789999999999999999999999976432111 1111110000 00000000
Q ss_pred c-------cccc--cCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 566 V-------ELMR--YENIE----EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 566 ~-------~~~~--~~~~~----~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
. .+.. ..... .....+.+|+.+||+.||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000 00000 112457788999999999999999999874
No 217
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.6e-38 Score=338.20 Aligned_cols=187 Identities=25% Similarity=0.382 Sum_probs=159.1
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeC-----CceEEEE
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSK-----DEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~ 411 (632)
.+.||+|+||.||+|... +++.||||+++..... .+.+.+|++++.++ +|+||+++++++... ...|+||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 367999999999999864 5789999999764332 45788999999999 899999999999876 5689999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||++ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp ECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred ecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9997 5999999754 3489999999999999999999998 99999999999999999999999999998754
Q ss_pred CC--------------------------CCCCCCCcccCCccc-cCCCCCccchhhHHHHHHHHHHhCCCCCC
Q 006747 492 TP--------------------------TVPSRSAGYRAPEVI-ETKKPTQKSDVYSFGVLLLEMLTGKAPIQ 537 (632)
Q Consensus 492 ~~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~DV~s~Gvvl~elltg~~p~~ 537 (632)
.. ....+|+.|+|||++ .+..++.++|||||||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 32 234578899999986 55669999999999999999998655543
No 218
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.9e-37 Score=326.30 Aligned_cols=253 Identities=20% Similarity=0.307 Sum_probs=185.3
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC------------HHHHHHHHHHHHhhcCCCCccceeEEEEeCC---
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG------------KREFEQQMEVVGRLSQHPNVVPIRAYYFSKD--- 405 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~------------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--- 405 (632)
.+.||+|+||.||+|...+|..||||++...... .+.+.+|++++.++ +||||+++++++...+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTT
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCC
Confidence 3579999999999999888999999999654221 26789999999999 8999999999996533
Q ss_pred --ceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcc
Q 006747 406 --EKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISD 483 (632)
Q Consensus 406 --~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~D 483 (632)
..++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred cceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEEe
Confidence 5799999998 58888887542 3589999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCC---CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006747 484 FGLTPLMNTP---TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEW 559 (632)
Q Consensus 484 fGla~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (632)
||+++..... ....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+. ...+........
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~ 254 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ---LNKIVEVVGTPK 254 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCC
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCC
Confidence 9999765432 23357888999999887 6689999999999999999999999975431111 000000000000
Q ss_pred -----------cccccccccccc--CC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 560 -----------TSEVFDVELMRY--EN----IEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 560 -----------~~~~~d~~~~~~--~~----~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
..+.+....... .. .......+.+++.+||+.||++|||+.|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000000000 00 01112457788999999999999999999874
No 219
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.6e-37 Score=316.11 Aligned_cols=244 Identities=22% Similarity=0.362 Sum_probs=176.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC--HHHHHHHHH-HHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG--KREFEQQME-VVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~e~~-~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|.. .+++.||+|+++..... ...+..+.. .+..+ +||||+++++++...+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-DCPFTVTFYGALFREGDVWICMELMDT 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSSEEEEEECCSE
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccCCEEEEEehhcc
Confidence 35799999999999996 56899999999765322 223333444 35555 999999999999999999999999984
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC--
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT-- 494 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~-- 494 (632)
+|.+++..... ...++++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++......
T Consensus 91 -~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 166 (290)
T 3fme_A 91 -SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166 (290)
T ss_dssp -EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred -chHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence 88777654211 1245899999999999999999999853 89999999999999999999999999998765432
Q ss_pred -CCCCCCcccCCccc----cCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 495 -VPSRSAGYRAPEVI----ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 495 -~~~~t~~y~aPE~~----~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
...+|+.|+|||.+ .+..++.++|||||||++|||+||+.||..... ............... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~-~------ 234 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQ-L------ 234 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCC-C------
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhccCCCC-c------
Confidence 23588899999996 556689999999999999999999999964221 111111111111110 0
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.. ......+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 PA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 00 111235778888999999999999999987
No 220
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2e-37 Score=317.46 Aligned_cols=241 Identities=19% Similarity=0.327 Sum_probs=188.8
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 357999999999999975 48899999987553 3467899999999999 89999999999999999999999999999
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC----CCC
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN----TPT 494 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~----~~~ 494 (632)
|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.... ...
T Consensus 103 l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 103 VDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999887532 2488999999999999999999998 99999999999999999999999999874321 123
Q ss_pred CCCCCCcccCCccc-----cCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccc
Q 006747 495 VPSRSAGYRAPEVI-----ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELM 569 (632)
Q Consensus 495 ~~~~t~~y~aPE~~-----~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 569 (632)
...++..|+|||.+ .+..++.++|||||||++|||++|+.||.... ............. ....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~-~~~~----- 243 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKSDP-PTLL----- 243 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCC-CCCS-----
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC------HHHHHHHHhccCC-cccC-----
Confidence 34578899999998 46678999999999999999999999996532 1111111111111 1000
Q ss_pred ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 570 RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 570 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
........+.+++.+||+.||++|||+.++++
T Consensus 244 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 ---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ---CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 01111235778889999999999999999876
No 221
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8.1e-38 Score=325.73 Aligned_cols=243 Identities=19% Similarity=0.288 Sum_probs=166.4
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEe----CCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS----KDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~E~~~~ 416 (632)
++||+|+||.||+|... +++.||||++... ....+|+..+.+..+||||+++++++.. ....++||||+++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~g 110 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG 110 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTT
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCC
Confidence 46999999999999975 6899999999653 2233444444444499999999999986 3458999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC---CCCeEEcccCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---DLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~~ 493 (632)
|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 111 g~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 111 GELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp EEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 99999998653 24689999999999999999999998 9999999999999976 456999999999766433
Q ss_pred --CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 494 --TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 494 --~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
....+|+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ........... ....
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~-----~~~~--- 254 (336)
T 3fhr_A 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GMKRRIRLGQY-----GFPN--- 254 (336)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCT---
T ss_pred ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hHHHhhhcccc-----ccCc---
Confidence 23457889999999988889999999999999999999999997543222110 00000000000 0000
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.........+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000112345678888999999999999999998
No 222
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.1e-37 Score=349.56 Aligned_cols=244 Identities=22% Similarity=0.363 Sum_probs=195.3
Q ss_pred HhHhCccceeEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILEE----GTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+.||+|+||.||+|.... +..||+|+++.... ..+.+.+|+.++.++ +||||+++++++ ..+..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~-~~~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVI-TENPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEE-ecCceEEEEEcC
Confidence 4679999999999998642 46799999875432 236789999999999 899999999998 456789999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT 494 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~ 494 (632)
++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 473 TLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999997542 3588999999999999999999998 99999999999999999999999999998775432
Q ss_pred C-----CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 495 V-----PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 495 ~-----~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
. ..+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+... ............. .
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~------~~~~~~i~~~~~~-~------ 612 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIENGERL-P------ 612 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHHTCCC-C------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHcCCCC-C------
Confidence 2 235678999999998899999999999999999997 9999975321 1111111111110 0
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhC
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIR 610 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 610 (632)
........+.+++.+||+.||++|||+.++++.|+++.
T Consensus 613 ----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 613 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 01112245778889999999999999999999999874
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3e-37 Score=315.52 Aligned_cols=242 Identities=20% Similarity=0.328 Sum_probs=193.2
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc----------CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEE
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM----------GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLL 409 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~----------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~l 409 (632)
.+.||+|+||.||+|... +++.||||+++.... ..+.+.+|++++.++.+||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 357999999999999965 588999999965421 134578899999999569999999999999999999
Q ss_pred EEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCC
Q 006747 410 VYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPL 489 (632)
Q Consensus 410 v~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 489 (632)
||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999754 2488999999999999999999998 999999999999999999999999999976
Q ss_pred CCCC---CCCCCCCcccCCcccc------CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 490 MNTP---TVPSRSAGYRAPEVIE------TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 490 ~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
.... ....++..|+|||.+. ...++.++||||||+++|||++|+.||..... .............
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~ 247 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRMIMSGNYQ 247 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHHHhcCCcc
Confidence 5433 2335788999999985 45678999999999999999999999965321 1111111111110
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
. .. .........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~--~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 F--GS------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp C--CT------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred c--Cc------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0 00 011112345778889999999999999999986
No 224
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.4e-37 Score=325.94 Aligned_cols=253 Identities=18% Similarity=0.289 Sum_probs=192.7
Q ss_pred HhHhCccceeEEEEEEEc-CC-cEEEEEEecccccCHHHHHHHHHHHHhhcCCCC------ccceeEEEEeCCceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EG-TTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN------VVPIRAYYFSKDEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n------iv~l~~~~~~~~~~~lv~E 412 (632)
.+.||+|+||.||+|... ++ ..||+|+++......+.+.+|++++.++ +|++ ++.+.+++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 367999999999999864 34 6899999986544456788899999988 5655 8999999999999999999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeee-------------------
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLL------------------- 473 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl------------------- 473 (632)
|+ +|++.+++.... ..++++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 103 LL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred cc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccccc
Confidence 99 567777766542 24588999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccCCCCCCCCC-CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 006747 474 SQDLQGCISDFGLTPLMNTP-TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQ 552 (632)
Q Consensus 474 ~~~~~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 552 (632)
+.++.+||+|||+++..... ....+|..|+|||.+.+..++.++|||||||++|||++|+.||......+. ...+.
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~ 252 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH---LVMME 252 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHH
Confidence 67899999999999865443 344688999999999999999999999999999999999999975432111 11111
Q ss_pred HHhhh--------ccccccc-cccc--------------------cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006747 553 SVVRE--------EWTSEVF-DVEL--------------------MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVV 603 (632)
Q Consensus 553 ~~~~~--------~~~~~~~-d~~~--------------------~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl 603 (632)
..... ......+ .... ........+...+.+++.+||+.||++|||+.|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 11000 0000000 0000 00011123345788999999999999999999998
Q ss_pred H
Q 006747 604 R 604 (632)
Q Consensus 604 ~ 604 (632)
+
T Consensus 333 ~ 333 (355)
T 2eu9_A 333 L 333 (355)
T ss_dssp T
T ss_pred c
Confidence 5
No 225
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.6e-38 Score=331.35 Aligned_cols=251 Identities=20% Similarity=0.294 Sum_probs=190.1
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeC-----CceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSK-----DEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~E 412 (632)
.+.||+|+||.||+|... ++..||||++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEc
Confidence 367999999999999854 678999999975432 236788999999999 899999999999765 36899999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 492 (632)
|++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 111 ~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 111 LME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 998 5999988753 388999999999999999999998 999999999999999999999999999976543
Q ss_pred C-------CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc---c
Q 006747 493 P-------TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWT---S 561 (632)
Q Consensus 493 ~-------~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~ 561 (632)
. ....+|+.|+|||.+.+. .++.++|||||||++|||++|+.||.+....+. ...+......... .
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ---LNHILGILGSPSQEDLN 257 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH---HHHHHHHHCSCCHHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH---HHHHHHHhCCCCHHHHH
Confidence 2 233688899999987654 489999999999999999999999976432221 1111111000000 0
Q ss_pred cccc-------ccccc--cCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 562 EVFD-------VELMR--YENI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 562 ~~~d-------~~~~~--~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
...+ ..... .... ......+.+++.+||+.||++|||+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 00000 0000 0112457788999999999999999999873
No 226
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.5e-37 Score=324.23 Aligned_cols=249 Identities=22% Similarity=0.360 Sum_probs=190.0
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccC--HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCC
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG--KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
+.||+|+||.||+|.. .+|+.||||+++..... ...+..|..++.+..+||||+++++++...+..++||||+++ +
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 135 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-S 135 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-E
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-c
Confidence 5799999999999996 56899999999765333 345566666644433999999999999999999999999985 9
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---CC
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP---TV 495 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~---~~ 495 (632)
|.+++..... ....+++..+..++.|++.||+|||+.. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 136 L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 212 (340)
T 3an0_A 136 LDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212 (340)
T ss_dssp HHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHHH
T ss_pred HHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccccccccc
Confidence 9888764211 1245899999999999999999999742 8999999999999999999999999998765432 12
Q ss_pred CCCCCcccCCccccC----CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 496 PSRSAGYRAPEVIET----KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 496 ~~~t~~y~aPE~~~~----~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
..+|..|+|||.+.+ ..++.++|||||||++|||+||+.||..... ....+......... ..
T Consensus 213 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~-~~-------- 278 (340)
T 3an0_A 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSP-QL-------- 278 (340)
T ss_dssp SSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCC-CC--------
T ss_pred CCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcCCCC-CC--------
Confidence 358889999999753 4689999999999999999999999964321 11112222211111 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhh
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR--MIEDI 609 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i 609 (632)
........+.+++.+||+.||++|||+.|+++ .+...
T Consensus 279 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 317 (340)
T 3an0_A 279 -PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 317 (340)
T ss_dssp -CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred -CcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccc
Confidence 00112245778889999999999999999987 44443
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=7.9e-38 Score=332.92 Aligned_cols=260 Identities=20% Similarity=0.326 Sum_probs=189.1
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCc------eEEEEecc
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDE------KLLVYDFI 414 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lv~E~~ 414 (632)
.+.||+|+||.||+|...++..||+|++.... +...+|++++.++ +||||+++++++..... .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 36899999999999998877789999886432 2234689999999 89999999999976543 78999999
Q ss_pred cCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec-CCCCeEEcccCCCCCCCCC
Q 006747 415 EAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS-QDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 415 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~-~~~~~ki~DfGla~~~~~~ 493 (632)
+++.+....+... ....+++.....++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 121 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 121 PETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp SEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 8755444332111 123588999999999999999999998 999999999999999 7999999999999765432
Q ss_pred ---CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH-------hhhccccc
Q 006747 494 ---TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV-------VREEWTSE 562 (632)
Q Consensus 494 ---~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 562 (632)
....+|+.|+|||.+.+. .++.++|||||||++|||++|+.||.+....+. +...+... +... ...
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~~-~~~ 272 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIKTM-NPN 272 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHH-CGG
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhh-Chh
Confidence 234578889999998765 489999999999999999999999976432111 11111100 0000 000
Q ss_pred cccccccc--cCCcH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhhCCC
Q 006747 563 VFDVELMR--YENIE-----EEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDIRPS 612 (632)
Q Consensus 563 ~~d~~~~~--~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i~~~ 612 (632)
........ ..... ....++.+++.+||+.||++|||+.|++++ +++++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 331 (394)
T 4e7w_A 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG 331 (394)
T ss_dssp GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence 00000000 00001 122467788999999999999999999985 6655443
No 228
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-37 Score=330.08 Aligned_cols=251 Identities=20% Similarity=0.298 Sum_probs=184.3
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCC--------------
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD-------------- 405 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-------------- 405 (632)
.+.||+|+||.||+|.. .+|+.||||++.... ....+|++++.++ +||||+++++++....
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTC-CCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHc-CCCCccchhheeeecCcccccccccccccc
Confidence 36799999999999985 568999999986542 2234789999999 9999999999985532
Q ss_pred ------------------------ceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCc
Q 006747 406 ------------------------EKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKF 461 (632)
Q Consensus 406 ------------------------~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 461 (632)
..++||||++ |+|.+.+..... ....+++..+..++.|++.||+|||+. +|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---gi 162 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSL---GI 162 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTT---TE
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---cC
Confidence 3789999998 487777653211 123588999999999999999999998 99
Q ss_pred eecCCCCCCeeec-CCCCeEEcccCCCCCCCCC---CCCCCCCcccCCccccCCC-CCccchhhHHHHHHHHHHhCCCCC
Q 006747 462 ILGNIKSSNVLLS-QDLQGCISDFGLTPLMNTP---TVPSRSAGYRAPEVIETKK-PTQKSDVYSFGVLLLEMLTGKAPI 536 (632)
Q Consensus 462 vHrDlk~~NILl~-~~~~~ki~DfGla~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~DV~s~Gvvl~elltg~~p~ 536 (632)
+||||||+|||++ +++.+||+|||+++..... ....+|..|+|||.+.+.. ++.++||||+||++|||++|+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999998 6899999999999865433 2345788899999988754 899999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHH----------hhhccccccccccccccCC-----cHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 006747 537 QAPGHEDVVDLPRWVQSV----------VREEWTSEVFDVELMRYEN-----IEEEMVQMLQIAMSCVAKVPDMRPTMEE 601 (632)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~d~~~~~~~~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~e 601 (632)
.+....+. +...+... ....+. +..-+.. .... .......+.+++.+||+.||++|||+.|
T Consensus 243 ~~~~~~~~--~~~i~~~~g~p~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 243 SGETSIDQ--LVRIIQIMGTPTKEQMIRMNPHYT-EVRFPTL-KAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp CCSSHHHH--HHHHHHHHCCCCHHHHHHHCTTC---CCCCCC-CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCChHHH--HHHHHHHhCCCCHHHHHHhCcccc-cccCCcc-CcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 76432111 11111100 000000 0000000 0000 0112245778899999999999999999
Q ss_pred HHH
Q 006747 602 VVR 604 (632)
Q Consensus 602 vl~ 604 (632)
+++
T Consensus 319 ~l~ 321 (383)
T 3eb0_A 319 AMA 321 (383)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
No 229
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.8e-37 Score=321.43 Aligned_cols=260 Identities=20% Similarity=0.329 Sum_probs=193.3
Q ss_pred HhHhCccceeEEEEEEE--cCCcEEEEEEecccccC---HHHHHHHHHHHHhhc--CCCCccceeEEEE-----eCCceE
Q 006747 341 AEVLGKGSYGTTYKAIL--EEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLS--QHPNVVPIRAYYF-----SKDEKL 408 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~--~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~--~h~niv~l~~~~~-----~~~~~~ 408 (632)
.+.||+|+||.||+|.. .+++.||+|+++..... ...+.+|++++..+. +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 35799999999999997 46889999999754321 235667777776654 7999999999987 455789
Q ss_pred EEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 409 LVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 409 lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
+||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 9999998 69999987643 23488999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCC---CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh----hhcccc
Q 006747 489 LMNTP---TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVV----REEWTS 561 (632)
Q Consensus 489 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~ 561 (632)
..... ....++..|+|||.+.+..++.++|||||||++|||+||+.||.+....+ ....+.... .+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPR 245 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGGGSCT
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHHcCCCCcccCcc
Confidence 76532 23457889999999999999999999999999999999999997543111 111111100 001110
Q ss_pred cccccc--cc------ccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhhC
Q 006747 562 EVFDVE--LM------RYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDIR 610 (632)
Q Consensus 562 ~~~d~~--~~------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i~ 610 (632)
....+. .. ...........+.+++.+||+.||++|||+.|++++ ++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence 000000 00 000001122356788889999999999999999963 55443
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=6.6e-37 Score=323.33 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=187.2
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCce------EEE
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEK------LLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------~lv 410 (632)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++.++ +||||+++++++...+.. ++|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccceeEEEE
Confidence 357999999999999854 5899999999765333 35688999999999 899999999999877654 999
Q ss_pred EecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCC
Q 006747 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLM 490 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~ 490 (632)
|||+. |+|.+++.. .+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99998 588888742 388999999999999999999998 9999999999999999999999999999876
Q ss_pred CCC-CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc------cccc
Q 006747 491 NTP-TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREE------WTSE 562 (632)
Q Consensus 491 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 562 (632)
... ....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+ ......... ....
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD------QLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHCCCCHHHHTT
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHHHhCCCcHHHHHH
Confidence 543 33467899999999987 678999999999999999999999997543111 111111000 0000
Q ss_pred ccc-------cccc--ccCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 563 VFD-------VELM--RYENI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 563 ~~d-------~~~~--~~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
+.+ ..+. ..... ......+.+++.+||+.||++|||+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 0000 00000 0113457788999999999999999999874
No 231
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.3e-37 Score=314.64 Aligned_cols=241 Identities=20% Similarity=0.334 Sum_probs=185.1
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEe-------------CCc
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS-------------KDE 406 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-------------~~~ 406 (632)
.+.||+|+||.||+|.. .+++.||||++.......+.+.+|++++.++ +||||+++++++.+ .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 36799999999999996 4689999999976544456789999999999 89999999999865 346
Q ss_pred eEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCC
Q 006747 407 KLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGL 486 (632)
Q Consensus 407 ~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGl 486 (632)
.++||||+++|+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 799999999999999997532 3578889999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCC------------------CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 006747 487 TPLMNTP------------------TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDL 547 (632)
Q Consensus 487 a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~ 547 (632)
++..... ....++..|+|||.+.+. .++.++|||||||++|||++ ||... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-----~~~ 234 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-----MER 234 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-----hhH
Confidence 9876421 123477889999999865 68999999999999999998 54321 011
Q ss_pred hHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 548 PRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 548 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
...... +..... .+.+. ........+.+++.+||+.||++|||+.+++++
T Consensus 235 ~~~~~~-~~~~~~--~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKK-LRSVSI--EFPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHH-HHSTTC--CCCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHh-cccccc--ccCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111 111100 00000 111223456788899999999999999999873
No 232
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.9e-37 Score=332.77 Aligned_cols=258 Identities=23% Similarity=0.320 Sum_probs=186.9
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCC------ceEEEEec
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKD------EKLLVYDF 413 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv~E~ 413 (632)
.+.||+|+||.||+|... +|+.||||++.... +...+|++++.++ +|||||+++++|.... ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 367999999999999975 58999999986532 2344789999999 8999999999986532 25799999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCC-CCeEEcccCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD-LQGCISDFGLTPLMNT 492 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~-~~~ki~DfGla~~~~~ 492 (632)
+++ ++.+.+..... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 986 66655542211 224589999999999999999999998 99999999999999965 6789999999986543
Q ss_pred C---CCCCCCCcccCCccccCC-CCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH-------hhhcccc
Q 006747 493 P---TVPSRSAGYRAPEVIETK-KPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSV-------VREEWTS 561 (632)
Q Consensus 493 ~---~~~~~t~~y~aPE~~~~~-~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 561 (632)
. ....+|..|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+...+... +.... .
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~~~~-~ 286 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMN-P 286 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHHHHC-S
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhC-h
Confidence 2 234578899999999765 68999999999999999999999997643211 111111110 00000 0
Q ss_pred cccccccccc--CCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhhC
Q 006747 562 EVFDVELMRY--ENI-----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR--MIEDIR 610 (632)
Q Consensus 562 ~~~d~~~~~~--~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i~ 610 (632)
...+..+... ... .....++.+|+.+||+.||++|||+.|+++ .++++.
T Consensus 287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0000000000 000 011245778899999999999999999986 345553
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.8e-36 Score=312.31 Aligned_cols=239 Identities=18% Similarity=0.296 Sum_probs=187.4
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHhhcC-CCCccceeEEEEeCCceEEEEecccCC
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQ-HPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
+.||+|+||.||++...+++.||||++...... .+.+.+|++++.++.+ |+||+++++++...+..++||| +.++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 112 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 112 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCC
Confidence 579999999999999888999999999754333 3568899999999943 6999999999999999999999 5678
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC---
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT--- 494 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--- 494 (632)
+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++++ +.+||+|||+++......
T Consensus 113 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 113 DLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp EHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 9999997642 578899999999999999999998 9999999999999964 899999999998764432
Q ss_pred ---CCCCCCcccCCccccC-----------CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006747 495 ---VPSRSAGYRAPEVIET-----------KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWT 560 (632)
Q Consensus 495 ---~~~~t~~y~aPE~~~~-----------~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (632)
...++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ..............
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~ 258 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNHE 258 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTSC
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHhcccc
Confidence 2347889999999876 4688899999999999999999999964321 11112222111111
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 561 SEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 561 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.. . .... ...+.+++.+||+.||++|||+.|++++
T Consensus 259 ~~-----~--~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 259 IE-----F--PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CC-----C--CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cC-----C--cccc---hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 0 0111 2356788889999999999999999975
No 234
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3e-37 Score=319.40 Aligned_cols=241 Identities=24% Similarity=0.361 Sum_probs=186.9
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc---------CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEE
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM---------GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLV 410 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 410 (632)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++...+ .++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEE
Confidence 467999999999999864 578999999865321 123588999999999 9999999999987654 8999
Q ss_pred EecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC---eEEcccCCC
Q 006747 411 YDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ---GCISDFGLT 487 (632)
Q Consensus 411 ~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla 487 (632)
|||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 93 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 9999999999998754 3588999999999999999999998 9999999999999987654 999999999
Q ss_pred CCCCCCC---CCCCCCcccCCcccc---CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 006747 488 PLMNTPT---VPSRSAGYRAPEVIE---TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTS 561 (632)
Q Consensus 488 ~~~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (632)
+...... ...+|..|+|||.+. ...++.++|||||||++|||++|+.||....... .+...+ ..+...
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~----~~~~~~ 238 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI----TSGKYN 238 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHH----HHTCCC
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHH----HhCccc
Confidence 8765432 124788999999974 5668999999999999999999999997543221 121111 111100
Q ss_pred ccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 562 EVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 562 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
..+.. .. .....+.+++.+||+.||++|||+.++++
T Consensus 239 --~~~~~--~~---~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 --FIPEV--WA---EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --CCHHH--HT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCchh--hh---hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 00 11245778889999999999999999875
No 235
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=311.55 Aligned_cols=243 Identities=19% Similarity=0.292 Sum_probs=189.5
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccc-----cCHHHHHHHHHHHHhhcCCCCccceeEEEE--eCCceEEEEec
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVV-----MGKREFEQQMEVVGRLSQHPNVVPIRAYYF--SKDEKLLVYDF 413 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--~~~~~~lv~E~ 413 (632)
+.||+|+||.||++.. .+++.||+|+++... .....+.+|++++.++ +||||+++++++. +....++||||
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 5799999999999996 458899999997542 2346789999999999 8999999999985 34578999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~ 493 (632)
+++| |.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 90 CVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp CSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred ccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9986 777766432 24588999999999999999999998 9999999999999999999999999999765432
Q ss_pred ------CCCCCCCcccCCccccCCC--CCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 494 ------TVPSRSAGYRAPEVIETKK--PTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 494 ------~~~~~t~~y~aPE~~~~~~--~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
....++..|+|||.+.+.. ++.++|||||||++|||++|+.||.... ......... .....
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~-~~~~~---- 231 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIG-KGSYA---- 231 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHH-HCCCC----
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHh-cCCCC----
Confidence 2335788999999997654 3789999999999999999999997532 111111111 11100
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhhC
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDIR 610 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i~ 610 (632)
.... ....+.+++.+||+.||++|||+.|++++ +++..
T Consensus 232 ----~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 232 ----IPGD---CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271 (305)
T ss_dssp ----CCSS---SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred ----CCCc---cCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence 0011 12356788889999999999999999974 55443
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=324.99 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=188.4
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEeCCc------eEEEE
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDE------KLLVY 411 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lv~ 411 (632)
+.||+|+||.||+|... +|+.||||++...... .+.+.+|+.++.++ +||||+++++++...+. .++||
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccceeEEEEe
Confidence 57999999999999864 5899999999765333 35688999999999 89999999999987654 49999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 109 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 109 PFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp ECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred cccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 9998 588877742 388999999999999999999998 99999999999999999999999999998765
Q ss_pred CC-CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---hcccccccc-
Q 006747 492 TP-TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVR---EEWTSEVFD- 565 (632)
Q Consensus 492 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d- 565 (632)
.. ....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+. ...+..... ..+...+.+
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~ 254 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQKLNDK 254 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHTTCSCH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHHhhH
Confidence 43 23357889999999887 6789999999999999999999999975431110 100000000 000000000
Q ss_pred -----------ccccc-cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhh
Q 006747 566 -----------VELMR-YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM--IEDI 609 (632)
Q Consensus 566 -----------~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i 609 (632)
..... ..........+.+++.+||+.||++|||+.|++++ ++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 00000 00011223457788899999999999999999874 4444
No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.9e-37 Score=319.25 Aligned_cols=249 Identities=24% Similarity=0.363 Sum_probs=170.1
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
.+.||+|+||.||+|... +|+.||||+++.... ....+..|+..+.+..+||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 367999999999999974 689999999976432 2345566666444434999999999999999999999999985
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCC---
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPT--- 494 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~--- 494 (632)
+|.+++..........+++..+..++.+++.||.|||+.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 183 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT 183 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecccccccc
Confidence 8877765321112345889999999999999999999853 89999999999999999999999999998765432
Q ss_pred CCCCCCcccCCccc----cCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 495 VPSRSAGYRAPEVI----ETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 495 ~~~~t~~y~aPE~~----~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
...+|..|+|||.+ .+..++.++|||||||++|||++|+.||........ ...... .... +.+..
T Consensus 184 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~-~~~~-----~~~~~ 252 (327)
T 3aln_A 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVV-KGDP-----PQLSN 252 (327)
T ss_dssp ----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCC-CSCC-----CCCCC
T ss_pred cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHh-cCCC-----CCCCC
Confidence 23578889999998 456689999999999999999999999975321100 000000 0000 00000
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
.........+.+++.+||+.||++|||+.|+++
T Consensus 253 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 253 -SEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000112235778889999999999999999976
No 238
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.8e-36 Score=317.51 Aligned_cols=257 Identities=17% Similarity=0.268 Sum_probs=191.2
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeC-----CceEEEEe
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSK-----DEKLLVYD 412 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~E 412 (632)
.+.||+|+||.||+|... +|+.||||++..... ....+.+|++++.++ +||||+++++++... ...++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEe
Confidence 357999999999999965 588999999964322 235678999999999 899999999998764 57899999
Q ss_pred cccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCC
Q 006747 413 FIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNT 492 (632)
Q Consensus 413 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~ 492 (632)
|+. |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 95 LMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 997 5999988753 488999999999999999999998 999999999999999999999999999976542
Q ss_pred C--------------CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh
Q 006747 493 P--------------TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVRE 557 (632)
Q Consensus 493 ~--------------~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 557 (632)
. ....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+ ....+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~ 241 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH---QLLLIFGIIGT 241 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCC
Confidence 2 11246888999998765 678999999999999999999999997543111 00001110000
Q ss_pred cc----ccccccc-------cccc--cCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhhCC
Q 006747 558 EW----TSEVFDV-------ELMR--YENI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVR--MIEDIRP 611 (632)
Q Consensus 558 ~~----~~~~~d~-------~~~~--~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i~~ 611 (632)
.. ....... .+.. .... ......+.+++.+||+.||++|||+.|+++ .++.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence 00 0000000 0000 0000 012245678899999999999999999987 3555433
No 239
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.5e-36 Score=307.12 Aligned_cols=245 Identities=22% Similarity=0.325 Sum_probs=194.2
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV---MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 467999999999999975 68999999997543 3467899999999999 999999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCC---CCeEEcccCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQD---LQGCISDFGLTPLMNTP 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~---~~~ki~DfGla~~~~~~ 493 (632)
++|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++.....
T Consensus 106 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 106 GELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 99999886542 488999999999999999999998 99999999999999754 47999999999876543
Q ss_pred CCC---CCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccc
Q 006747 494 TVP---SRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMR 570 (632)
Q Consensus 494 ~~~---~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 570 (632)
... .++..|+|||.+.+. ++.++||||||+++|||++|+.||..... .............. ....
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-----~~~~ 245 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAF-----DLPQ 245 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC-----CSGG
T ss_pred CccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCCC-----Cchh
Confidence 322 357779999998764 89999999999999999999999975321 11111111111100 0001
Q ss_pred cCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhh
Q 006747 571 YENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR--MIEDI 609 (632)
Q Consensus 571 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i 609 (632)
.... ...+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 246 ~~~~---~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 246 WRTI---SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp GTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred hhhc---CHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 1111 235678888999999999999999998 44443
No 240
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=318.67 Aligned_cols=248 Identities=20% Similarity=0.304 Sum_probs=181.5
Q ss_pred HhHhCccceeEEEEEEEcC-CcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEE--------------eC
Q 006747 341 AEVLGKGSYGTTYKAILEE-GTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYF--------------SK 404 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--------------~~ 404 (632)
.+.||+|+||.||+|.... ++.||+|++.... ...+.+.+|++++.++ +||||+++++++. ..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccccccccccccc
Confidence 3579999999999999764 8999999987543 2246788999999999 8999999999874 34
Q ss_pred CceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec-CCCCeEEcc
Q 006747 405 DEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS-QDLQGCISD 483 (632)
Q Consensus 405 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~-~~~~~ki~D 483 (632)
...++||||++ |+|.+++... ++++.....++.|++.||+|||+. +|+||||||+||+++ +++.+||+|
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred CceeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 57899999998 6999998642 478899999999999999999998 999999999999997 567999999
Q ss_pred cCCCCCCCCC-------CCCCCCCcccCCccccC-CCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh
Q 006747 484 FGLTPLMNTP-------TVPSRSAGYRAPEVIET-KKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVV 555 (632)
Q Consensus 484 fGla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 555 (632)
||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||......+ ......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE------QMQLIL 238 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHH
Confidence 9999876432 12235778999998865 678999999999999999999999997543111 111111
Q ss_pred hhcc-------------ccccccccccccC-Cc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 556 REEW-------------TSEVFDVELMRYE-NI----EEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 556 ~~~~-------------~~~~~d~~~~~~~-~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.... ............. .. ......+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000 0000000000000 00 0112457788999999999999999999873
No 241
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=328.93 Aligned_cols=238 Identities=20% Similarity=0.340 Sum_probs=179.1
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHhh
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA 421 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~ 421 (632)
++||+|+||+||.....+++.||||++..... ..+.+|++++.++.+|||||++++++.+....++||||+. |+|.+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~ 106 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQE 106 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHH
Confidence 57999999997666666799999999965422 2356789999988789999999999999999999999997 59999
Q ss_pred hhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC-----CCCeEEcccCCCCCCCCC---
Q 006747 422 LLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ-----DLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 422 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~-----~~~~ki~DfGla~~~~~~--- 493 (632)
++..... ...+.....++.|++.||+|||+. +|+||||||+|||++. ...+||+|||+++.....
T Consensus 107 ~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 107 YVEQKDF----AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp HHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred HHHhcCC----CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 9976532 233345578999999999999998 9999999999999943 346889999999876432
Q ss_pred ----CCCCCCCcccCCcccc---CCCCCccchhhHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcccccccc
Q 006747 494 ----TVPSRSAGYRAPEVIE---TKKPTQKSDVYSFGVLLLEMLT-GKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFD 565 (632)
Q Consensus 494 ----~~~~~t~~y~aPE~~~---~~~~~~~~DV~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 565 (632)
....+|++|+|||++. ...++.++|||||||++|||+| |+.||..... ....... .......
T Consensus 180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------~~~~~~~-~~~~~~~-- 249 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------RQANILL-GACSLDC-- 249 (432)
T ss_dssp ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------HHHHHHT-TCCCCTT--
T ss_pred eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------HHHHHHh-ccCCccc--
Confidence 2235899999999997 4567889999999999999999 8999854221 1111111 1111000
Q ss_pred ccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 566 VELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
..........+.+++.+||+.||++|||+.||++
T Consensus 250 -----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 -----LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -----SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0111123344678899999999999999999984
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=311.84 Aligned_cols=242 Identities=19% Similarity=0.298 Sum_probs=170.0
Q ss_pred HhHhCccceeEEEEEEEc-CCcEEEEEEecccccC--HHHHHHHH-HHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 341 AEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVVMG--KREFEQQM-EVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~-~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
.+.||+|+||.||+|... +|+.||||++...... ...+..|. .++..+ +||||+++++++...+..++||||+ +
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEecc-C
Confidence 467999999999999975 6899999999765322 22333333 455566 9999999999999999999999999 4
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCC---
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTP--- 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~--- 493 (632)
+.+..+.... ..++++..+..++.+++.||+|||+.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (318)
T 2dyl_A 108 TCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK 181 (318)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred CcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc
Confidence 5555555432 135889999999999999999999832 8999999999999999999999999999765433
Q ss_pred CCCCCCCcccCCcccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccc
Q 006747 494 TVPSRSAGYRAPEVIE-----TKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVEL 568 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~-----~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 568 (632)
....++..|+|||.+. ...++.++|||||||++|||++|+.||..... .............. ..
T Consensus 182 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~------~~ 250 (318)
T 2dyl_A 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEEPP------LL 250 (318)
T ss_dssp -----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSCCC------CC
T ss_pred cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccCCC------CC
Confidence 2235788999999994 45688999999999999999999999964221 11222222222111 00
Q ss_pred cccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 569 MRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 569 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
...... ...+.+++.+||+.||++|||+.++++
T Consensus 251 ~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 PGHMGF---SGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CSSSCC---CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccCCC---CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 011111 235677888999999999999999986
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.5e-37 Score=317.26 Aligned_cols=233 Identities=20% Similarity=0.366 Sum_probs=189.3
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc-------CHHHHHHHHHHHHhhc-CCCCccceeEEEEeCCceEEEE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM-------GKREFEQQMEVVGRLS-QHPNVVPIRAYYFSKDEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~-~h~niv~l~~~~~~~~~~~lv~ 411 (632)
.+.||+|+||.||+|.. .+++.||||+++.... ....+..|++++.++. .|+||+++++++...+..++|+
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 36799999999999985 5688999999976532 1245778999999995 3699999999999999999999
Q ss_pred ecccC-CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec-CCCCeEEcccCCCCC
Q 006747 412 DFIEA-GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS-QDLQGCISDFGLTPL 489 (632)
Q Consensus 412 E~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~-~~~~~ki~DfGla~~ 489 (632)
||+.+ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+++.
T Consensus 128 e~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 128 ERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp ECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EcCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99986 89999987542 488899999999999999999998 999999999999999 789999999999977
Q ss_pred CCCCC--CCCCCCcccCCccccCCCC-CccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccc
Q 006747 490 MNTPT--VPSRSAGYRAPEVIETKKP-TQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDV 566 (632)
Q Consensus 490 ~~~~~--~~~~t~~y~aPE~~~~~~~-~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 566 (632)
..... ...+|..|+|||.+.+..+ +.++|||||||++|||+||+.||.... ....... .+
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~---~~-- 262 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQV---FF-- 262 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCC---CC--
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhcccc---cc--
Confidence 65432 3358889999999987765 678999999999999999999996321 0011100 00
Q ss_pred cccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 567 ELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 567 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
.... ...+.+++.+||+.||++|||+.|++++
T Consensus 263 ----~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 263 ----RQRV---SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----SSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----cccC---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 2356788889999999999999999873
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=313.14 Aligned_cols=233 Identities=21% Similarity=0.337 Sum_probs=183.8
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEecccccC-------HHHHHHHHHHHHhhc---CCCCccceeEEEEeCCceEE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMG-------KREFEQQMEVVGRLS---QHPNVVPIRAYYFSKDEKLL 409 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-------~~~~~~e~~~l~~l~---~h~niv~l~~~~~~~~~~~l 409 (632)
.+.||+|+||.||+|.. .+++.||||++...... ...+.+|++++.++. +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 36799999999999985 46889999999754321 223567888888874 69999999999999999999
Q ss_pred EEec-ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeec-CCCCeEEcccCCC
Q 006747 410 VYDF-IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLS-QDLQGCISDFGLT 487 (632)
Q Consensus 410 v~E~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~-~~~~~ki~DfGla 487 (632)
|+|| +.+++|.+++.... ++++..+..++.+++.||+|||+. +|+||||||+||+++ +++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 78999999997642 488999999999999999999998 999999999999999 8899999999999
Q ss_pred CCCCCC--CCCCCCCcccCCccccCCCCC-ccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006747 488 PLMNTP--TVPSRSAGYRAPEVIETKKPT-QKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVF 564 (632)
Q Consensus 488 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~-~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (632)
+..... ....++..|+|||.+.+..+. .++|||||||++|||++|+.||.... .......
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~----- 250 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAEL----- 250 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTCC-----
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhcc-----
Confidence 776543 233578899999999877664 58999999999999999999996310 0011100
Q ss_pred cccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 565 DVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 565 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
..... ....+.+++.+||+.||++|||+.|++++
T Consensus 251 ----~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 ----HFPAH---VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----CCCTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCccc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011 12356788889999999999999999874
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.4e-36 Score=303.14 Aligned_cols=227 Identities=13% Similarity=0.124 Sum_probs=176.3
Q ss_pred hHhCccceeEEEEEEEcC-CcEEEEEEecccccC----HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMG----KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||+|.... ++.||||++...... .+.+.+|++.+.++ +||||+++++++...+..|+||||+++
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEEecCC
Confidence 579999999999999754 899999999865432 26789999999999 999999999999999999999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP 496 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 496 (632)
++|.+++... .......+++.|++.||+|||+. +|+||||||+|||+++++.+||+++|
T Consensus 116 ~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 116 GSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp EEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred CCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 9999999542 23456788999999999999998 99999999999999999999998553
Q ss_pred CCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHH
Q 006747 497 SRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEE 576 (632)
Q Consensus 497 ~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 576 (632)
|++| ++.++|||||||++|||+||+.||.+....+..... ............. ....
T Consensus 175 -----~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~--- 231 (286)
T 3uqc_A 175 -----TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------ERDTAGQPIEPAD-IDRD--- 231 (286)
T ss_dssp -----CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------CBCTTSCBCCHHH-HCTT---
T ss_pred -----ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------HHHhccCCCChhh-cccC---
Confidence 4443 688999999999999999999999865432211000 0000000000000 0011
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhhCCCCC
Q 006747 577 EMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDS 614 (632)
Q Consensus 577 ~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~ 614 (632)
....+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 232 ~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 232 IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 12346788889999999999 99999999999876543
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-36 Score=341.02 Aligned_cols=232 Identities=18% Similarity=0.271 Sum_probs=187.0
Q ss_pred HhHhCccceeEEEEEEEc--CCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEeCCc-----eEEEE
Q 006747 341 AEVLGKGSYGTTYKAILE--EGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDE-----KLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~--~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~lv~ 411 (632)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++...+. .|+||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 357999999999999975 589999999865422 235688999999999 89999999999998765 69999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+++++|.+++.. +++|..+..++.|++.||+|||+. +|+||||||+|||++++ .+||+|||+++...
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999887653 489999999999999999999998 99999999999999986 99999999998887
Q ss_pred CCCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc
Q 006747 492 TPTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY 571 (632)
Q Consensus 492 ~~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 571 (632)
......+|++|+|||++.+.. +.++|||||||++|||++|..||.+....... ..
T Consensus 233 ~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------------~~ 287 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------------ED 287 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------------------TT
T ss_pred cCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc------------------------cc
Confidence 766677999999999987654 88999999999999999999887642211100 00
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHhhh
Q 006747 572 ENIEEEMVQMLQIAMSCVAKVPDMRPT-MEEVVRMIEDI 609 (632)
Q Consensus 572 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs-~~evl~~L~~i 609 (632)
.........+.+++.+||+.||++||+ ++++...|..+
T Consensus 288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 001112245778899999999999995 56666666544
No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.9e-35 Score=302.67 Aligned_cols=225 Identities=18% Similarity=0.256 Sum_probs=174.3
Q ss_pred hHhCccceeEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEe----CCceEEEEecccC
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFS----KDEKLLVYDFIEA 416 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~E~~~~ 416 (632)
+.||+|+||.||++.. .+++.||+|+++. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 5699999999999986 4689999999964 35678888888666699999999999987 6678999999999
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecC---CCCeEEcccCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQ---DLQGCISDFGLTPLMNTP 493 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~---~~~~ki~DfGla~~~~~~ 493 (632)
|+|.+++.... ..++++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 100 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-- 171 (299)
T 3m2w_A 100 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-- 171 (299)
T ss_dssp CBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence 99999998653 24589999999999999999999998 9999999999999998 7899999999986433
Q ss_pred CCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccccccccccc-C
Q 006747 494 TVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRY-E 572 (632)
Q Consensus 494 ~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~ 572 (632)
+..++.++|||||||++|||+||+.||......... ............... .
T Consensus 172 ----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 224 (299)
T 3m2w_A 172 ----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------PGMKTRIRMGQYEFPNP 224 (299)
T ss_dssp ----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSCTTCCSSCHH
T ss_pred ----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----------HHHHHHHhhccccCCch
Confidence 244678999999999999999999999754321110 000000000000000 0
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006747 573 NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRM 605 (632)
Q Consensus 573 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 605 (632)
........+.+++.+||+.||++|||+.|++++
T Consensus 225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001123457788899999999999999999984
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.5e-36 Score=332.64 Aligned_cols=262 Identities=21% Similarity=0.288 Sum_probs=195.6
Q ss_pred HhHhCccceeEEEEEEE-cCCcEEEEEEeccccc--CHHHHHHHHHHHHhhcCCCCccceeEEEEe------CCceEEEE
Q 006747 341 AEVLGKGSYGTTYKAIL-EEGTTVVVKRLKEVVM--GKREFEQQMEVVGRLSQHPNVVPIRAYYFS------KDEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv~ 411 (632)
.+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++.++ +||||+++++++.. .+..++||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEEE
Confidence 46799999999999986 4589999999875422 245688999999999 89999999998765 56789999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCC---eEEcccCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQ---GCISDFGLTP 488 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~---~ki~DfGla~ 488 (632)
||+++|+|.+++..... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 99999999999986532 23578888999999999999999998 9999999999999997765 9999999998
Q ss_pred CCCCCC---CCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc----ccc
Q 006747 489 LMNTPT---VPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREE----WTS 561 (632)
Q Consensus 489 ~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~ 561 (632)
...... ...+|..|+|||.+.+..++.++|||||||++|||++|+.||..... ...|........ ...
T Consensus 173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------CCSC
T ss_pred ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchhhhhh
Confidence 765432 33588899999999999999999999999999999999999965310 001100000000 000
Q ss_pred c------ccccccccc-CCcHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHhhhCCCC
Q 006747 562 E------VFDVELMRY-ENIEEEMVQMLQIAMSCVAKVPDMRPTMEE-----VVRMIEDIRPSD 613 (632)
Q Consensus 562 ~------~~d~~~~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~e-----vl~~L~~i~~~~ 613 (632)
+ .+....... .........+.+++.+||+.||++|||+.+ ..+.++.+....
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 0 000010001 111223456788899999999999999988 556666665443
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-35 Score=314.27 Aligned_cols=235 Identities=13% Similarity=0.129 Sum_probs=171.9
Q ss_pred hHhCccceeEEEEEE-EcCCcEEEEEEecccc----cCHHHHHHHHHHHHhhcCC-CCccce---------e--------
Q 006747 342 EVLGKGSYGTTYKAI-LEEGTTVVVKRLKEVV----MGKREFEQQMEVVGRLSQH-PNVVPI---------R-------- 398 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~-~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h-~niv~l---------~-------- 398 (632)
+.||+|+||.||+|. ..+|+.||||+++... ...+.+.+|+.++..+ +| +|.... .
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchhhcccCCC
Confidence 579999999999999 4568999999987432 2246788999998888 55 322111 1
Q ss_pred ----EEEEe-----CCceEEEEecccCCCHhhhhccCC--CCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCC
Q 006747 399 ----AYYFS-----KDEKLLVYDFIEAGSFSALLHGNR--GIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIK 467 (632)
Q Consensus 399 ----~~~~~-----~~~~~lv~E~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk 467 (632)
.++.. ....+++|+++ +|+|.+++.... .....+++|..++.++.|++.||+|||+. +|+|||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDiK 238 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 238 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcc
Confidence 11111 12356777765 579999884210 01234688899999999999999999998 99999999
Q ss_pred CCCeeecCCCCeEEcccCCCCCCCCC-CCCCCCCcccCCccc----------cCCCCCccchhhHHHHHHHHHHhCCCCC
Q 006747 468 SSNVLLSQDLQGCISDFGLTPLMNTP-TVPSRSAGYRAPEVI----------ETKKPTQKSDVYSFGVLLLEMLTGKAPI 536 (632)
Q Consensus 468 ~~NILl~~~~~~ki~DfGla~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~DV~s~Gvvl~elltg~~p~ 536 (632)
|+|||++.++.+||+|||+++..... ....+ +.|+|||++ .+..++.++|||||||++|||+||+.||
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf 317 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN 317 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999998776543 23356 899999999 5556889999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006747 537 QAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVR 604 (632)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 604 (632)
......+... .++. .....+ ..+.+++.+||+.||++|||+.++++
T Consensus 318 ~~~~~~~~~~---------------~~~~----~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 318 TDDAALGGSE---------------WIFR----SCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CTTGGGSCSG---------------GGGS----SCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCcchhhhHH---------------HHHh----hcccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 7543221110 0111 111122 35778888999999999999766643
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.5e-35 Score=305.01 Aligned_cols=237 Identities=14% Similarity=0.166 Sum_probs=179.0
Q ss_pred HHhHhCccceeEEEEEEEcCCcEEEEEEeccccc---------CHHHHHHHHHHHHhhc--------CCCCccceeEEEE
Q 006747 340 SAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM---------GKREFEQQMEVVGRLS--------QHPNVVPIRAYYF 402 (632)
Q Consensus 340 ~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~--------~h~niv~l~~~~~ 402 (632)
..+.||+|+||.||+|+. +|+.||||+++.... ..+.+.+|++++.++. +|||||++.+.+.
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~ 102 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEE
T ss_pred heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeE
Confidence 457899999999999988 689999999975421 2377999999999884 3777777777643
Q ss_pred ------------------------------eCCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHH
Q 006747 403 ------------------------------SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAH 452 (632)
Q Consensus 403 ------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~ 452 (632)
..+..++||||+++|++.+.+.. ..+++.....++.|++.||+|
T Consensus 103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHHH
Confidence 16789999999999977766643 247889999999999999999
Q ss_pred HH-hccCCCceecCCCCCCeeecCCC--------------------CeEEcccCCCCCCCCCCCCCCCCcccCCccccCC
Q 006747 453 IH-AAVGGKFILGNIKSSNVLLSQDL--------------------QGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETK 511 (632)
Q Consensus 453 LH-~~~~~~ivHrDlk~~NILl~~~~--------------------~~ki~DfGla~~~~~~~~~~~t~~y~aPE~~~~~ 511 (632)
|| +. +|+||||||+|||++.++ .+||+|||+|+..... ...+|+.|+|||++.+.
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~ 252 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGD 252 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCC
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCC
Confidence 99 88 999999999999999887 9999999999876543 34688999999999877
Q ss_pred CCCccchhhHHHHH-HHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccccccccccCCcHHHHHHHHHHHHHccC
Q 006747 512 KPTQKSDVYSFGVL-LLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVA 590 (632)
Q Consensus 512 ~~~~~~DV~s~Gvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~ 590 (632)
. +.++||||+|++ .+++++|..||.. ..|................. ...........++.+|+.+||+
T Consensus 253 ~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~dli~~~L~ 321 (336)
T 2vuw_A 253 G-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMTFKTK-CNTPAMKQIKRKIQEFHRTMLN 321 (336)
T ss_dssp S-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCCCSSC-CCSHHHHHHHHHHHHHHHHGGG
T ss_pred C-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhccCcc-cchhhhhhcCHHHHHHHHHHhc
Confidence 6 899999998877 7778889999842 11211111110000000000 0011123345678899999999
Q ss_pred CCCCCCCCHHHHH
Q 006747 591 KVPDMRPTMEEVV 603 (632)
Q Consensus 591 ~~P~~RPs~~evl 603 (632)
.| |++|++
T Consensus 322 ~d-----sa~e~l 329 (336)
T 2vuw_A 322 FS-----SATDLL 329 (336)
T ss_dssp SS-----SHHHHH
T ss_pred cC-----CHHHHH
Confidence 76 899988
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.9e-29 Score=279.49 Aligned_cols=180 Identities=14% Similarity=0.063 Sum_probs=127.7
Q ss_pred hCccceeEEEEEE-EcCCcEEEEEEecccc-----------cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEE
Q 006747 344 LGKGSYGTTYKAI-LEEGTTVVVKRLKEVV-----------MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVY 411 (632)
Q Consensus 344 lg~G~fg~V~~~~-~~~~~~vavK~~~~~~-----------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 411 (632)
.+.|++|.+..++ +--|+.+|+|++.... ...++|.+|+++|.++.+|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666665544 3348999999996542 123569999999999988999999999999999999999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||++||+|.+++.... +++.. +|+.|++.||+|+|++ +||||||||+|||+++++.+||+|||+|+...
T Consensus 322 Eyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp ECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred ecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999998653 35543 5889999999999999 99999999999999999999999999998775
Q ss_pred CCCC----CCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCC
Q 006747 492 TPTV----PSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAP 535 (632)
Q Consensus 492 ~~~~----~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p 535 (632)
.... ..||++|||||++.+. +..++|+||+|++++++.++..+
T Consensus 391 ~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 4432 2478899999999764 57789999999998887665444
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=8.1e-27 Score=240.05 Aligned_cols=184 Identities=33% Similarity=0.647 Sum_probs=166.6
Q ss_pred cCChhHHHHHHHHHHhCCCCCC-CCCCCCCCCCCC--CcceEecCCC--CeEEEEEeCCCCccc--ccCchhhcCCCCCc
Q 006747 21 ADLNSDKQALLDFAANVPHARK-LNWNSSTSVCTS--WVGITCTKNG--SRVLAVRLPGVGLYG--PIPANTLEKLDSLM 93 (632)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~~~~-~~w~~~~~~c~~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~lp~~~l~~l~~L~ 93 (632)
.|.+.|++||++||+++.++.. .+|+.++++| . |.||+|+... ++|+.|+|+++++.| .+|. .+.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 4778999999999999965433 4898777777 5 9999998654 799999999999999 8998 799999999
Q ss_pred EEeccC-CccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccc
Q 006747 94 ILSLRS-NHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNN 170 (632)
Q Consensus 94 ~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N 170 (632)
+|+|++ |++.+.+|..|.++++|++|+|++|++++.+|..+. ++|++|+|++|.+++.+|..++++++|+.|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 999999999999999999999999999999999886 79999999999999999999999999999999999
Q ss_pred cccccCCCC--CCC-CCcEEEcccCCCCCCCcccccCCC
Q 006747 171 SLTGFIPNF--NLS-RLRHLNLSYNHLNGSVPLALQKFP 206 (632)
Q Consensus 171 ~l~~~~p~~--~~~-~L~~l~ls~N~l~g~~p~~~~~~~ 206 (632)
++++.+|.. .++ .|+.|+|++|+++|.+|..+..+.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 198 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc
Confidence 999888863 666 899999999999999998887654
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=3.2e-26 Score=252.25 Aligned_cols=177 Identities=14% Similarity=0.195 Sum_probs=145.2
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEecccccC---------HHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEE
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMG---------KREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVY 411 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 411 (632)
.+.||+|+||.||+|.. .+..+++|+....... .+.+.+|++++.++ +||||+++..++...+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEE
Confidence 56899999999999954 5788999986543211 23479999999999 9999998888888888899999
Q ss_pred ecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCC
Q 006747 412 DFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMN 491 (632)
Q Consensus 412 E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~ 491 (632)
||+++|+|.+++.. +..++.|++.||+|||+. +|+||||||+|||+++ .+||+|||+++...
T Consensus 419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999874 357899999999999998 9999999999999999 99999999998876
Q ss_pred CCC-----------CCCCCCcccCCccccC--CCCCccchhhHHHHHHHHHHhCCCCCC
Q 006747 492 TPT-----------VPSRSAGYRAPEVIET--KKPTQKSDVYSFGVLLLEMLTGKAPIQ 537 (632)
Q Consensus 492 ~~~-----------~~~~t~~y~aPE~~~~--~~~~~~~DV~s~Gvvl~elltg~~p~~ 537 (632)
... ...+|+.|||||++.. ..|+..+|+|+..+-.++-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 531 2347889999999987 557888999999999999988887763
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=1.7e-24 Score=249.80 Aligned_cols=186 Identities=25% Similarity=0.359 Sum_probs=152.9
Q ss_pred hhccCChhHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCcceEecCCCCeEEEEEeCCCCcccc---cCc----------
Q 006747 18 QMIADLNSDKQALLDFAANVPHA-RKLNWNSSTSVCTSWVGITCTKNGSRVLAVRLPGVGLYGP---IPA---------- 83 (632)
Q Consensus 18 ~~~~~~~~~~~~l~~~~~~~~~~-~~~~w~~~~~~c~~w~gv~c~~~~~~v~~l~l~~~~l~g~---lp~---------- 83 (632)
+..++.++|++||++||+++.++ ...+|+.++++| +|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 34555778999999999998544 334998767666 89999998 58999999999999987 554
Q ss_pred ------------hhhcCCCCCcEEeccCCccCCCCCc--cccCCCCCCeEeecCCcCCccCCCCcc---CCCcEEEccCC
Q 006747 84 ------------NTLEKLDSLMILSLRSNHLSGDLPS--NVLSLSSLRFLYLQNNNFSGNIPSSLS---PQLNWVDLSFN 146 (632)
Q Consensus 84 ------------~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~~L~~L~Ls~N 146 (632)
..++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+. ++|++|||++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 3678889999999999999999998 999999999999999999998887762 78999999999
Q ss_pred CCcccCCcc---ccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCC
Q 006747 147 SITGNIPAS---IRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPP 207 (632)
Q Consensus 147 ~l~g~~p~~---~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 207 (632)
++++..|.. +.++++|+.|+|++|.+++.+|...+++|++|+|++|++++.+|. +.+++.
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~ 224 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSA 224 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCS
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCC
Confidence 999888877 788888888888888888777766777788888888877776665 554443
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1e-23 Score=242.93 Aligned_cols=181 Identities=23% Similarity=0.394 Sum_probs=157.9
Q ss_pred CChhHHHHHHHHHHhCCCCCCCCCCCCC-----CC-CCCC------------cceEecCCCCeEEEEEeCCCCcccccCc
Q 006747 22 DLNSDKQALLDFAANVPHARKLNWNSST-----SV-CTSW------------VGITCTKNGSRVLAVRLPGVGLYGPIPA 83 (632)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~~~~~w~~~~-----~~-c~~w------------~gv~c~~~~~~v~~l~l~~~~l~g~lp~ 83 (632)
+...|.+||++||+++.++ +|+.++ ++ ||.| .||+|+. .+||+.|+|++++|.|.+|+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 3457999999999999644 897665 44 2499 9999986 58999999999999999998
Q ss_pred hhhcCCCCCcEEec-cCCccCCC---------------------------------------------------------
Q 006747 84 NTLEKLDSLMILSL-RSNHLSGD--------------------------------------------------------- 105 (632)
Q Consensus 84 ~~l~~l~~L~~L~L-s~N~l~g~--------------------------------------------------------- 105 (632)
.+++|++|+.|+| ++|.++|.
T Consensus 342 -~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 -AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp -GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred -HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 8999999999999 88876554
Q ss_pred -------------------CCccccCCCCCCeEeecCCcCCc-----------------cCCCCcc----CCCcEEEccC
Q 006747 106 -------------------LPSNVLSLSSLRFLYLQNNNFSG-----------------NIPSSLS----PQLNWVDLSF 145 (632)
Q Consensus 106 -------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~----~~L~~L~Ls~ 145 (632)
+|..|++|++|++|+|++|+|+| .+|..+. ++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 88899999999999999999998 4898875 7899999999
Q ss_pred CCCcccCCccccCCCCccceeccccc-ccc-cCCC---------CCCCCCcEEEcccCCCCCCCcc--cccCCCCC
Q 006747 146 NSITGNIPASIRNLSHLVGLNLQNNS-LTG-FIPN---------FNLSRLRHLNLSYNHLNGSVPL--ALQKFPPS 208 (632)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~l~l~~N~-l~~-~~p~---------~~~~~L~~l~ls~N~l~g~~p~--~~~~~~~~ 208 (632)
|++.|.+|..|+++++|+.|+|++|+ |+| .+|. ..+++|+.|+|++|+|+ .+|. .+.+++..
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 99999999999999999999999998 998 6664 14569999999999999 8998 77766654
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.89 E-value=2.8e-23 Score=234.36 Aligned_cols=180 Identities=24% Similarity=0.412 Sum_probs=156.2
Q ss_pred hhHHHHHHHHHHhCCCC----------CCCCCCCCCCCCCCC---cceEecCCCCeEEEEEeCCCCcccccCchhhcCCC
Q 006747 24 NSDKQALLDFAANVPHA----------RKLNWNSSTSVCTSW---VGITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLD 90 (632)
Q Consensus 24 ~~~~~~l~~~~~~~~~~----------~~~~w~~~~~~c~~w---~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~ 90 (632)
..|.+||.+++.++... ...+|+.++++| .| .||+|+.. +||+.|+|+++++.|.+|+ .+++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcCc
Confidence 46999999999998422 123798877777 89 99999865 8999999999999999997 899999
Q ss_pred CCcEEeccCCc---------------------------------------------------------------------
Q 006747 91 SLMILSLRSNH--------------------------------------------------------------------- 101 (632)
Q Consensus 91 ~L~~L~Ls~N~--------------------------------------------------------------------- 101 (632)
+|+.|+|++|.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999994
Q ss_pred ---------cCCCCCccccCCCCCCeEeecCCcCCcc-----------------CCCCcc----CCCcEEEccCCCCccc
Q 006747 102 ---------LSGDLPSNVLSLSSLRFLYLQNNNFSGN-----------------IPSSLS----PQLNWVDLSFNSITGN 151 (632)
Q Consensus 102 ---------l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~----~~L~~L~Ls~N~l~g~ 151 (632)
|+| +|..|+++++|++|+|++|+|+|. +|..+. ++|++|+|++|++.|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 445 899999999999999999999986 898876 7899999999999999
Q ss_pred CCccccCCCCccceeccccc-ccc-cCCCC--C------CCCCcEEEcccCCCCCCCcc--cccCCCCC
Q 006747 152 IPASIRNLSHLVGLNLQNNS-LTG-FIPNF--N------LSRLRHLNLSYNHLNGSVPL--ALQKFPPS 208 (632)
Q Consensus 152 ~p~~~~~l~~L~~l~l~~N~-l~~-~~p~~--~------~~~L~~l~ls~N~l~g~~p~--~~~~~~~~ 208 (632)
+|..|+++++|+.|+|++|+ ++| .+|.. . +++|+.|+|++|+++ .+|. .+.+++..
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L 332 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKL 332 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTC
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCC
Confidence 99999999999999999998 998 66652 3 389999999999999 8888 77766544
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.6e-22 Score=202.83 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=113.0
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEeccccc-------------------CHHHHHHHHHHHHhhcCCCCccceeEEEE
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM-------------------GKREFEQQMEVVGRLSQHPNVVPIRAYYF 402 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~ 402 (632)
+.||+|+||.||+|...+|+.||+|.++.... ....+.+|++++.++ + | +++.+++.
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l-~--~-~~v~~~~~ 171 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-Q--G-LAVPKVYA 171 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-T--T-SSSCCEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc-c--C-CCcCeEEe
Confidence 68999999999999997799999999964321 134588999999999 4 5 66666554
Q ss_pred eCCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEc
Q 006747 403 SKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCIS 482 (632)
Q Consensus 403 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~ 482 (632)
. +..++||||+++|+|.+ +... ....++.|++.||+|||+. +|+||||||+|||++ ++.+||+
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~~-----------~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRVE-----------NPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCCS-----------CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEEC
T ss_pred c-cceEEEEEecCCCcHHH-cchh-----------hHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEE
Confidence 4 56799999999999998 4321 1346999999999999998 999999999999999 9999999
Q ss_pred ccCCCCCCCCCCCCCCCCcccCCcccc
Q 006747 483 DFGLTPLMNTPTVPSRSAGYRAPEVIE 509 (632)
Q Consensus 483 DfGla~~~~~~~~~~~t~~y~aPE~~~ 509 (632)
|||+++.. ..|+|||++.
T Consensus 235 DFG~a~~~---------~~~~a~e~l~ 252 (282)
T 1zar_A 235 DFPQSVEV---------GEEGWREILE 252 (282)
T ss_dssp CCTTCEET---------TSTTHHHHHH
T ss_pred ECCCCeEC---------CCCCHHHHHH
Confidence 99998643 3478999874
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.84 E-value=1.6e-21 Score=224.82 Aligned_cols=114 Identities=39% Similarity=0.681 Sum_probs=89.5
Q ss_pred CCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEE
Q 006747 113 LSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLN 188 (632)
Q Consensus 113 l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ 188 (632)
+++|++|||++|+|+|.+|..+. ++|+.|+|++|+|+|.+|..|+++++|+.|||++|+|+|.+|.. .+++|+.||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 45566777777777777777665 67778888888888888888888888888888888888887764 678888888
Q ss_pred cccCCCCCCCccc--ccCCCCCCccCCCCCCCCCCCCCCC
Q 006747 189 LSYNHLNGSVPLA--LQKFPPSSFEGNSMLCGPPLNQCST 226 (632)
Q Consensus 189 ls~N~l~g~~p~~--~~~~~~~~~~~n~~~c~~~~~~c~~ 226 (632)
|++|+|+|.||.. +..++..+|.||+.+||.|+..|..
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 8888888888864 6677788899999999998877754
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=2.6e-21 Score=200.13 Aligned_cols=185 Identities=18% Similarity=0.306 Sum_probs=144.9
Q ss_pred hhccCChhHHHHHHHHHHhCC-CC--CCCCCC----CCCCCCCCCcceEecC--------CCCeEEEEEeCCCCcccccC
Q 006747 18 QMIADLNSDKQALLDFAANVP-HA--RKLNWN----SSTSVCTSWVGITCTK--------NGSRVLAVRLPGVGLYGPIP 82 (632)
Q Consensus 18 ~~~~~~~~~~~~l~~~~~~~~-~~--~~~~w~----~~~~~c~~w~gv~c~~--------~~~~v~~l~l~~~~l~g~lp 82 (632)
+..++..+|.+||++||.++. +. ...+|. ...++| .|.|+.|.. ...+|+.|+|+++++. .+|
T Consensus 20 ~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp 97 (328)
T 4fcg_A 20 QGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFP 97 (328)
T ss_dssp C--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCC
T ss_pred eccccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcC
Confidence 345677889999999999872 22 223784 344556 899999952 3468999999999998 888
Q ss_pred chhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccC--
Q 006747 83 ANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRN-- 158 (632)
Q Consensus 83 ~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~-- 158 (632)
+ .+..+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+. ++|++|+|++|++.+.+|..++.
T Consensus 98 ~-~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~ 174 (328)
T 4fcg_A 98 D-QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD 174 (328)
T ss_dssp S-CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC
T ss_pred h-hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhcc
Confidence 7 5777999999999999998 88988999999999999999998 7887776 68999999998888888887765
Q ss_pred -------CCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCcccccCCCCC
Q 006747 159 -------LSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQKFPPS 208 (632)
Q Consensus 159 -------l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 208 (632)
+++|+.|+|++|+++..+..+ .+++|+.|+|++|++++ +|..+..++..
T Consensus 175 ~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L 231 (328)
T 4fcg_A 175 ASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKL 231 (328)
T ss_dssp -CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTC
T ss_pred chhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCC
Confidence 888888888888888433333 67888888888888884 56566655543
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.80 E-value=3.4e-19 Score=176.96 Aligned_cols=152 Identities=25% Similarity=0.265 Sum_probs=123.4
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
.+..|+|+++++.+..+ ..+.++++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..+. ++|++|+|
T Consensus 36 ~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 46678888888886444 4788999999999999999988888889999999999999999965555554 78999999
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCCCCCcccccCCCC---CCccCCCCCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLNGSVPLALQKFPP---SSFEGNSMLCG 218 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~~~~n~~~c~ 218 (632)
++|+|++..+..|..+++|+.|+|++|+|++.++. + .+++|+.|+|++|+|++..+..+..++. ..+.+|.+.|.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999977777788999999999999999988774 3 7889999999999999776666665543 45677776654
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.9e-19 Score=173.97 Aligned_cols=153 Identities=24% Similarity=0.247 Sum_probs=113.8
Q ss_pred CCCCCCCCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCC
Q 006747 44 NWNSSTSVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLS 114 (632)
Q Consensus 44 ~w~~~~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 114 (632)
-|+..++.| +|.+|.|+++. ..+..|+|++|.+++..|. .|..+++|+.|+|++|+|++..+..|.+++
T Consensus 11 ~~~~~~~~C-s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 88 (229)
T 3e6j_A 11 AACPSQCSC-SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLT 88 (229)
T ss_dssp CCCCTTCEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCCCCCEE-eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCC
Confidence 456667778 89999998632 2466788888888765444 677888888888888888755556677888
Q ss_pred CCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcc
Q 006747 115 SLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLS 190 (632)
Q Consensus 115 ~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls 190 (632)
+|++|+|++|+|++..+..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++.. .+++|+.|+|+
T Consensus 89 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 167 (229)
T 3e6j_A 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLF 167 (229)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 888888888888855444443 67888888888887 67778888888888888888888776642 67788888888
Q ss_pred cCCCCCCCc
Q 006747 191 YNHLNGSVP 199 (632)
Q Consensus 191 ~N~l~g~~p 199 (632)
+|.+++..+
T Consensus 168 ~N~~~c~c~ 176 (229)
T 3e6j_A 168 GNPWDCECR 176 (229)
T ss_dssp TSCBCTTBG
T ss_pred CCCccCCcc
Confidence 888876544
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.78 E-value=1.1e-18 Score=168.04 Aligned_cols=149 Identities=24% Similarity=0.322 Sum_probs=123.9
Q ss_pred CCCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeE
Q 006747 49 TSVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFL 119 (632)
Q Consensus 49 ~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 119 (632)
.+.| .|.+|.|+..+ .+++.|+|++++++ .+++..+..+++|++|+|++|++++..+..|.++++|++|
T Consensus 4 ~C~C-~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 4 RCSC-SGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYL 81 (208)
T ss_dssp TCEE-ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEE-CCCEEEecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEE
Confidence 4456 89999998643 25788999999998 5666678899999999999999997666678899999999
Q ss_pred eecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCC
Q 006747 120 YLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLN 195 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~ 195 (632)
+|++|++++..+..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|++++.++. + .+++|+.|+|++|.+.
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 9999999965555454 7899999999999987777789999999999999999987775 3 6889999999999887
Q ss_pred CCCc
Q 006747 196 GSVP 199 (632)
Q Consensus 196 g~~p 199 (632)
+..|
T Consensus 162 ~~~~ 165 (208)
T 2o6s_A 162 CTCP 165 (208)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 7655
No 263
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=4.8e-19 Score=172.17 Aligned_cols=150 Identities=21% Similarity=0.200 Sum_probs=98.4
Q ss_pred CCCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeE
Q 006747 49 TSVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFL 119 (632)
Q Consensus 49 ~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 119 (632)
.+.| .|..+.|+++. ..+..|+|++|.+++..|.+.|..+++|+.|+|++|+|++..+..|.++++|++|
T Consensus 8 ~C~C-~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 8 KCRC-EGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TCEE-ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEE-CCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 3444 67777776532 1345667777777655555456677777777777777776656667777777777
Q ss_pred eecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCC
Q 006747 120 YLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLN 195 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~ 195 (632)
+|++|++++..|..|. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|.. .+++|+.|+|++|.|+
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 7777777655554443 56777777777777666677777777777777777777665542 5667777777777766
Q ss_pred CCCc
Q 006747 196 GSVP 199 (632)
Q Consensus 196 g~~p 199 (632)
+..+
T Consensus 167 c~c~ 170 (220)
T 2v70_A 167 CNCY 170 (220)
T ss_dssp CSGG
T ss_pred CCCc
Confidence 5544
No 264
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.77 E-value=2.3e-19 Score=184.25 Aligned_cols=138 Identities=24% Similarity=0.403 Sum_probs=102.9
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCC-CCCeEeecCCcCCccCCCCcc-CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLS-SLRFLYLQNNNFSGNIPSSLS-PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~-~~L~~L~ 142 (632)
.++..|+|++|.+.|.+|. .+..+++|++|+|++|.++|.+|..+.+++ +|++|+|++|+++|.+|..+. ..|+.|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 3577889999999988887 788899999999999999988899999888 899999999999888887765 3477777
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCccccc
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQ 203 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~ 203 (632)
|++|++++.+|..|.++++|+.|+|++|++++.+|.+ .+++|+.|+|++|+|+|.+|..+.
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 265 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLT 265 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGG
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHh
Confidence 7777777777777777777777777666666655543 445555555555555555554443
No 265
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=1.6e-18 Score=168.36 Aligned_cols=144 Identities=24% Similarity=0.343 Sum_probs=85.0
Q ss_pred CCCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeE
Q 006747 49 TSVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFL 119 (632)
Q Consensus 49 ~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 119 (632)
.+.| .|..|.|++++ ..++.|+|++|++++ +++..|..+++|+.|+|++|+|++..|..|.++++|++|
T Consensus 8 ~C~C-~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 85 (220)
T 2v9t_B 8 ACTC-SNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85 (220)
T ss_dssp TSEE-ETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE
T ss_pred CCEE-CCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE
Confidence 3445 67778886532 135556666666653 444456666666666666666665556666666666666
Q ss_pred eecCCcCCccCCCC-cc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCC
Q 006747 120 YLQNNNFSGNIPSS-LS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHL 194 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~-~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l 194 (632)
+|++|+|+ .+|.. |. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++. + .+++|+.|+|++|.+
T Consensus 86 ~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 86 VLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred ECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 66666666 33332 22 4566666666666665566666666666666666666665554 2 455666666666655
Q ss_pred C
Q 006747 195 N 195 (632)
Q Consensus 195 ~ 195 (632)
.
T Consensus 165 ~ 165 (220)
T 2v9t_B 165 I 165 (220)
T ss_dssp E
T ss_pred C
Confidence 4
No 266
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.6e-18 Score=172.81 Aligned_cols=131 Identities=15% Similarity=0.171 Sum_probs=101.5
Q ss_pred hHhCccceeEEEEEEE-cCCcE--EEEEEecccccC-------------------------HHHHHHHHHHHHhhcCCCC
Q 006747 342 EVLGKGSYGTTYKAIL-EEGTT--VVVKRLKEVVMG-------------------------KREFEQQMEVVGRLSQHPN 393 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~-~~~~~--vavK~~~~~~~~-------------------------~~~~~~e~~~l~~l~~h~n 393 (632)
+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|++.+.++ +|++
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~ 131 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-KEAG 131 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-HHTT
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-HhCC
Confidence 5799999999999997 67889 999987543111 12578899999999 7776
Q ss_pred c--cceeEEEEeCCceEEEEecccC-C----CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHH-hccCCCceecC
Q 006747 394 V--VPIRAYYFSKDEKLLVYDFIEA-G----SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIH-AAVGGKFILGN 465 (632)
Q Consensus 394 i--v~l~~~~~~~~~~~lv~E~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivHrD 465 (632)
+ ...+++ +..++||||+.+ | +|.++... .++.....++.+++.+|.||| +. +|+|||
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 4 333332 367899999942 4 66665432 113345688999999999999 77 999999
Q ss_pred CCCCCeeecCCCCeEEcccCCCCCC
Q 006747 466 IKSSNVLLSQDLQGCISDFGLTPLM 490 (632)
Q Consensus 466 lk~~NILl~~~~~~ki~DfGla~~~ 490 (632)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 267
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=4e-18 Score=178.63 Aligned_cols=170 Identities=25% Similarity=0.292 Sum_probs=141.4
Q ss_pred CCCCCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhc-CCCCCcEEeccCCccCCCCCccccCCCCC
Q 006747 47 SSTSVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLE-KLDSLMILSLRSNHLSGDLPSNVLSLSSL 116 (632)
Q Consensus 47 ~~~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 116 (632)
+..+.| .|..|.|.++. ..+..|+|++|.+++ +++..+. ++++|+.|+|++|+|++..|..|.++++|
T Consensus 13 p~~C~C-~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L 90 (361)
T 2xot_A 13 PANCLC-ASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNL 90 (361)
T ss_dssp CTTCEE-ETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CCCCEE-CCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCCCCC
Confidence 344555 68889997632 236789999999985 5555777 99999999999999998888889999999
Q ss_pred CeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC-----CCCCCcEEEc
Q 006747 117 RFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-----NLSRLRHLNL 189 (632)
Q Consensus 117 ~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-----~~~~L~~l~l 189 (632)
++|+|++|+|++..+..|. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++.. .+++|+.|+|
T Consensus 91 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L 170 (361)
T 2xot_A 91 RYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDL 170 (361)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEEC
T ss_pred CEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEEC
Confidence 9999999999976666665 79999999999999988999999999999999999999876652 5899999999
Q ss_pred ccCCCCCCCcccccCCC-----CCCccCCCCCCC
Q 006747 190 SYNHLNGSVPLALQKFP-----PSSFEGNSMLCG 218 (632)
Q Consensus 190 s~N~l~g~~p~~~~~~~-----~~~~~~n~~~c~ 218 (632)
++|+|++..+..+..++ ...+.+|++.|.
T Consensus 171 ~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 171 SSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 99999965555666654 356788888775
No 268
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.73 E-value=2.4e-17 Score=165.42 Aligned_cols=137 Identities=23% Similarity=0.292 Sum_probs=73.0
Q ss_pred EEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEcc
Q 006747 67 VLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLS 144 (632)
Q Consensus 67 v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls 144 (632)
+..|+|+++.++ .+++..|.++++|++|+|++|.++...+..|.++++|++|+|++|++++..+..+. ++|++|+|+
T Consensus 39 l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 39 TKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp CSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 344555555554 23333455566666666666666543333445566666666666665533333332 456666666
Q ss_pred CCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCCCCCcccccC
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLNGSVPLALQK 204 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~ 204 (632)
+|++++..|..|+++++|+.|+|++|++++.++. + .+++|+.|+|++|++++..+..+.+
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 179 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDK 179 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhcc
Confidence 6666555555555666666666666666555443 2 4555666666666655443333433
No 269
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=4.8e-18 Score=161.35 Aligned_cols=128 Identities=27% Similarity=0.316 Sum_probs=111.3
Q ss_pred EEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCc-cccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccC
Q 006747 69 AVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPS-NVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSF 145 (632)
Q Consensus 69 ~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~ 145 (632)
.++++++++. .+|.. +. .+|+.|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|. ++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~~-~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRD-IP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCSC-CC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCccC-CC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4556667774 78873 32 3899999999999976664 489999999999999999988888886 7999999999
Q ss_pred CCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcc
Q 006747 146 NSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPL 200 (632)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~ 200 (632)
|+|++..|..|.++++|+.|+|++|+|++.+|.. .+++|+.|+|++|.|++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 9999998989999999999999999999998864 789999999999999988764
No 270
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=1.1e-16 Score=155.40 Aligned_cols=154 Identities=21% Similarity=0.229 Sum_probs=130.4
Q ss_pred cceEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCC-ccccCCCCCCeEeecCCcCCccCCCCc
Q 006747 56 VGITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLP-SNVLSLSSLRFLYLQNNNFSGNIPSSL 134 (632)
Q Consensus 56 ~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 134 (632)
.+.+|.. ..+++++++++ .+|.. + ...++.|+|++|+|++..| ..|.++++|++|+|++|++++..|..|
T Consensus 7 ~~C~C~~-----~~l~~s~n~l~-~iP~~-~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 77 (220)
T 2v70_A 7 EKCRCEG-----TTVDCSNQKLN-KIPEH-I--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF 77 (220)
T ss_dssp TTCEEET-----TEEECCSSCCS-SCCSC-C--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCEECC-----CEeEeCCCCcc-cCccC-C--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHh
Confidence 5677764 27899999997 58873 3 3457899999999997755 458899999999999999998777677
Q ss_pred c--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCC---
Q 006747 135 S--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPP--- 207 (632)
Q Consensus 135 ~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~--- 207 (632)
. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|.. .+++|+.|+|++|+|++..|..|..++.
T Consensus 78 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 157 (220)
T 2v70_A 78 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLST 157 (220)
T ss_dssp TTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCE
T ss_pred CCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCE
Confidence 5 78999999999999988888999999999999999999998763 7899999999999999888888876654
Q ss_pred CCccCCCCCCC
Q 006747 208 SSFEGNSMLCG 218 (632)
Q Consensus 208 ~~~~~n~~~c~ 218 (632)
..+.+|++.|.
T Consensus 158 L~L~~N~l~c~ 168 (220)
T 2v70_A 158 LNLLANPFNCN 168 (220)
T ss_dssp EECCSCCEECS
T ss_pred EEecCcCCcCC
Confidence 45678877764
No 271
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.70 E-value=9.2e-17 Score=155.97 Aligned_cols=154 Identities=25% Similarity=0.292 Sum_probs=131.0
Q ss_pred cceEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc
Q 006747 56 VGITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS 135 (632)
Q Consensus 56 ~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 135 (632)
.+.+|.. ..+++.+++++ .+|.. + .++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.
T Consensus 7 ~~C~C~~-----~~v~c~~~~l~-~iP~~-l--~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 77 (220)
T 2v9t_B 7 AACTCSN-----NIVDCRGKGLT-EIPTN-L--PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ 77 (220)
T ss_dssp TTSEEET-----TEEECTTSCCS-SCCSS-C--CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred CCCEECC-----CEEEcCCCCcC-cCCCc-c--CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhh
Confidence 4677864 25789999998 68763 3 27899999999999987777999999999999999999988888886
Q ss_pred --CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCC---C
Q 006747 136 --PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPP---S 208 (632)
Q Consensus 136 --~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~ 208 (632)
++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|.. .+++|+.|+|++|+|++..+..+..++. .
T Consensus 78 ~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 157 (220)
T 2v9t_B 78 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTM 157 (220)
T ss_dssp TCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEE
Confidence 79999999999999766667899999999999999999998863 7899999999999999877766766554 4
Q ss_pred CccCCCCCCC
Q 006747 209 SFEGNSMLCG 218 (632)
Q Consensus 209 ~~~~n~~~c~ 218 (632)
.+.+|++.|.
T Consensus 158 ~L~~N~~~c~ 167 (220)
T 2v9t_B 158 HLAQNPFICD 167 (220)
T ss_dssp ECCSSCEECS
T ss_pred EeCCCCcCCC
Confidence 5678887764
No 272
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.70 E-value=1.6e-16 Score=159.60 Aligned_cols=151 Identities=23% Similarity=0.295 Sum_probs=129.4
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
..+..|+|++|.+.+ ++ .+..+++|++|+|++|.+++..+..+.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 468899999999986 43 689999999999999999988788889999999999999999976666554 7899999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCC---CCccCCCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPP---SSFEGNSMLC 217 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~~~~n~~~c 217 (632)
|++|++++..|..|+++++|+.|+|++|++++.++.. .+++|+.|+|++|++++..|..+..++. ..+.+|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999887888899999999999999999888763 7899999999999999877766665554 4556777665
Q ss_pred C
Q 006747 218 G 218 (632)
Q Consensus 218 ~ 218 (632)
.
T Consensus 220 ~ 220 (272)
T 3rfs_A 220 T 220 (272)
T ss_dssp C
T ss_pred c
Confidence 4
No 273
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.69 E-value=2.3e-16 Score=158.24 Aligned_cols=153 Identities=23% Similarity=0.304 Sum_probs=131.4
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+|+++.++ .+|+..+.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 61 ~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 46889999999998 67777889999999999999999987777889999999999999999977666664 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCCCCCcccccCCCC---CCccCCCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLNGSVPLALQKFPP---SSFEGNSMLC 217 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~~~~n~~~c 217 (632)
|++|+|++..+..|..+++|+.|+|++|++++.++. + .+++|+.|+|++|+|++..+..+..++. ..+.+|++.|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 999999987777799999999999999999998775 3 7899999999999999665555655544 4567887766
Q ss_pred C
Q 006747 218 G 218 (632)
Q Consensus 218 ~ 218 (632)
.
T Consensus 220 ~ 220 (270)
T 2o6q_A 220 T 220 (270)
T ss_dssp S
T ss_pred C
Confidence 4
No 274
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.69 E-value=2.1e-16 Score=154.47 Aligned_cols=155 Identities=26% Similarity=0.296 Sum_probs=127.2
Q ss_pred CcceEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCc
Q 006747 55 WVGITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSL 134 (632)
Q Consensus 55 w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 134 (632)
|..-.|+. ..++.+++++. .+|.. + .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..+
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~-~ip~~-~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHA-SVPAG-I--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcC-ccCCC-C--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 55567863 35888999986 78873 3 4889999999999999889999999999999999999984444444
Q ss_pred c--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCcccccCCCC---C
Q 006747 135 S--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQKFPP---S 208 (632)
Q Consensus 135 ~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~ 208 (632)
. ++|++|+|++|+|++..+..|..+++|+.|+|++|+|+..+..+ .+++|+.|+|++|+|++..+..+..++. .
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 4 78999999999999877788999999999999999999654444 8899999999999999766666665554 4
Q ss_pred CccCCCCCCC
Q 006747 209 SFEGNSMLCG 218 (632)
Q Consensus 209 ~~~~n~~~c~ 218 (632)
.+.+|++.|.
T Consensus 165 ~l~~N~~~c~ 174 (229)
T 3e6j_A 165 YLFGNPWDCE 174 (229)
T ss_dssp ECTTSCBCTT
T ss_pred EeeCCCccCC
Confidence 5677877664
No 275
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=1.7e-16 Score=150.60 Aligned_cols=129 Identities=24% Similarity=0.270 Sum_probs=113.7
Q ss_pred CCCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeE
Q 006747 49 TSVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFL 119 (632)
Q Consensus 49 ~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 119 (632)
.+.| .|..+.|+++. ..++.|+|++|.+++..+...+..+++|+.|+|++|+|++..|..|.++++|++|
T Consensus 5 ~C~C-~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 83 (192)
T 1w8a_A 5 MCHC-EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQEL 83 (192)
T ss_dssp TSEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred CCEE-CCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEE
Confidence 4456 79999998642 2678899999999865554468999999999999999999989999999999999
Q ss_pred eecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCC
Q 006747 120 YLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN 178 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 178 (632)
+|++|+|++..|..+. ++|++|+|++|+|++.+|..|..+++|+.|+|++|.+++..+.
T Consensus 84 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 9999999988887775 7999999999999999999999999999999999999987653
No 276
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.68 E-value=8e-17 Score=166.36 Aligned_cols=146 Identities=21% Similarity=0.321 Sum_probs=117.8
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccC---------CCCCCeEeecCCcCCccCCCCcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLS---------LSSLRFLYLQNNNFSGNIPSSLS 135 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~---------l~~L~~L~Ls~N~l~g~~p~~~~ 135 (632)
.++..|+|++|.++ .+|. .+.++++|+.|+|++|++.+.+|..+.. +++|++|+|++|+++ .+|..+.
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~ 203 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA 203 (328)
T ss_dssp TTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG
T ss_pred CCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc
Confidence 35778899999998 8887 6888999999999998888888887765 888999999999888 7787765
Q ss_pred --CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCCC---
Q 006747 136 --PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPPS--- 208 (632)
Q Consensus 136 --~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~--- 208 (632)
++|+.|+|++|++++ +|..++++++|+.|+|++|++.+.+|.. .+++|+.|+|++|++.+.+|..+.+++..
T Consensus 204 ~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 282 (328)
T 4fcg_A 204 NLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKL 282 (328)
T ss_dssp GCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEE
T ss_pred CCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEE
Confidence 688888888888885 6777888888888888888888888763 67888888888888888888777666544
Q ss_pred CccCCC
Q 006747 209 SFEGNS 214 (632)
Q Consensus 209 ~~~~n~ 214 (632)
.+.+|.
T Consensus 283 ~L~~n~ 288 (328)
T 4fcg_A 283 DLRGCV 288 (328)
T ss_dssp ECTTCT
T ss_pred eCCCCC
Confidence 344444
No 277
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.67 E-value=3.4e-16 Score=155.17 Aligned_cols=132 Identities=22% Similarity=0.242 Sum_probs=118.1
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+|++|.+++. ++..+..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..+. ++|+.|+
T Consensus 59 ~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTL-SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCC-CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCcc-CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 4688999999999964 445799999999999999999988788899999999999999999965555554 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGS 197 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~ 197 (632)
|++|+|++..+..|+.+++|+.|+|++|+|++.++.. .+++|+.|+|++|.|++.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999877778999999999999999999888753 789999999999999976
No 278
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.67 E-value=3.2e-16 Score=158.40 Aligned_cols=141 Identities=23% Similarity=0.236 Sum_probs=96.7
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCc-cCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNH-LSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
++..|+|+++.+++..|. .+..+++|++|+|++|. ++...|..+..+++|++|+|++|.+++..|..+. ++|++|+
T Consensus 57 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 57 NLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCccceeCHh-hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 567777777777654443 67777777777777776 6655566777777777777777777765565554 5677777
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCCCCCcccccCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLNGSVPLALQKFPP 207 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 207 (632)
|++|++++..+..|+++++|+.|+|++|++++.++. + .+++|+.|+|++|++++..|..+..++.
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 202 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCccc
Confidence 777777765556677777777777777777766554 2 5677777777777777666666655443
No 279
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=4.3e-16 Score=145.69 Aligned_cols=133 Identities=25% Similarity=0.290 Sum_probs=111.0
Q ss_pred CCCCCCcceEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCcc
Q 006747 50 SVCTSWVGITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGN 129 (632)
Q Consensus 50 ~~c~~w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 129 (632)
+.| +|.++.|+++ +++ .+|.. ..++|+.|+|++|++++..+..+.++++|++|+|++|++++.
T Consensus 5 C~C-~~~~l~~~~~------------~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (177)
T 2o6r_A 5 CSC-SGTEIRCNSK------------GLT-SVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSL 67 (177)
T ss_dssp CEE-ETTEEECCSS------------CCS-SCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CEe-CCCEEEecCC------------CCc-cCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEe
Confidence 344 6888888653 333 45542 247899999999999977777789999999999999999965
Q ss_pred CCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCc
Q 006747 130 IPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVP 199 (632)
Q Consensus 130 ~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p 199 (632)
.+..+. ++|+.|+|++|+|++..+..+..+++|+.|+|++|++++.++.. .+++|+.|+|++|.+++..|
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 555554 79999999999999877778899999999999999999887763 68999999999999998776
No 280
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.66 E-value=2.3e-16 Score=161.20 Aligned_cols=153 Identities=30% Similarity=0.436 Sum_probs=91.0
Q ss_pred CCCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccC--CCCCccccCCCCCC
Q 006747 49 TSVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLS--GDLPSNVLSLSSLR 117 (632)
Q Consensus 49 ~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~ 117 (632)
.+.| .|.+|.|++.+ ..++.|+|++++++ .+|...+.++++|+.|+|++|.++ +.+|..+..+++|+
T Consensus 4 ~C~C-~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 81 (306)
T 2z66_A 4 RCSC-SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLK 81 (306)
T ss_dssp TCEE-ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCC
T ss_pred CCee-CCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccC
Confidence 3445 89999998643 36889999999998 788777889999999999999887 32344444555555
Q ss_pred eEeecCCcCCccCCCCcc---------------------------CCCcEEEccCCCCcccCCccccCCCCccceecccc
Q 006747 118 FLYLQNNNFSGNIPSSLS---------------------------PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNN 170 (632)
Q Consensus 118 ~L~Ls~N~l~g~~p~~~~---------------------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N 170 (632)
+|+|++|.++ .+|..+. ++|++|+|++|.+++..|..+..+++|+.|+|++|
T Consensus 82 ~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 82 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 5555555554 2332222 34555555555555444444555555555555555
Q ss_pred cccc-cCCC-C-CCCCCcEEEcccCCCCCCCcccccC
Q 006747 171 SLTG-FIPN-F-NLSRLRHLNLSYNHLNGSVPLALQK 204 (632)
Q Consensus 171 ~l~~-~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~ 204 (632)
.+++ .+|. + .+++|+.|+|++|++++..|..+..
T Consensus 161 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 197 (306)
T 2z66_A 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 197 (306)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred ccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcC
Confidence 5544 2222 1 4455555555555555444444433
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.65 E-value=2.2e-16 Score=170.56 Aligned_cols=152 Identities=23% Similarity=0.344 Sum_probs=132.3
Q ss_pred CCcc--eEecCCC--------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCC-CccccCCCCCCeEeec
Q 006747 54 SWVG--ITCTKNG--------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDL-PSNVLSLSSLRFLYLQ 122 (632)
Q Consensus 54 ~w~g--v~c~~~~--------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls 122 (632)
.|.+ |.|+..+ .+++.|+|+++.+++..|. .+.++++|++|+|++|.+.+.+ |..|.++++|++|+|+
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTT-TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChh-HhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 4544 8887643 4689999999999875555 8999999999999999998766 5679999999999999
Q ss_pred CCcCCccCCCCcc--CCCcEEEccCCCCcccCCcc--ccCCCCccceecccccccccCCC--C-CCCCCcEEEcccCCCC
Q 006747 123 NNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPAS--IRNLSHLVGLNLQNNSLTGFIPN--F-NLSRLRHLNLSYNHLN 195 (632)
Q Consensus 123 ~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~l~l~~N~l~~~~p~--~-~~~~L~~l~ls~N~l~ 195 (632)
+|++++..|..+. ++|++|+|++|++++.+|.. |+++++|+.|+|++|++++..|. + .+++|+.|+|++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9999988888886 79999999999999866665 99999999999999999999886 3 7899999999999999
Q ss_pred CCCcccccCCC
Q 006747 196 GSVPLALQKFP 206 (632)
Q Consensus 196 g~~p~~~~~~~ 206 (632)
+..|..+..+.
T Consensus 168 ~~~~~~l~~l~ 178 (455)
T 3v47_A 168 SICEEDLLNFQ 178 (455)
T ss_dssp CCCTTTSGGGT
T ss_pred ccChhhhhccc
Confidence 98888776654
No 282
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.65 E-value=6.8e-16 Score=154.98 Aligned_cols=134 Identities=24% Similarity=0.311 Sum_probs=120.3
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+|++|.+++ +++..+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+. ++|+.|+
T Consensus 85 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCc-cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 468899999999985 5555789999999999999999988888899999999999999999966665554 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCc
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVP 199 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p 199 (632)
|++|++++..+..|+.+++|+.|+|++|++++.++.. .+++|+.|+|++|.+.+..|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9999999888888999999999999999999988863 78999999999999998776
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.65 E-value=2.8e-16 Score=175.85 Aligned_cols=169 Identities=17% Similarity=0.178 Sum_probs=134.6
Q ss_pred CCCCCCCCCCC---CcceEecCC----C------------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCC
Q 006747 44 NWNSSTSVCTS---WVGITCTKN----G------------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSG 104 (632)
Q Consensus 44 ~w~~~~~~c~~---w~gv~c~~~----~------------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g 104 (632)
+|.+...||.. |.++.|+.. . ..+..+++.++.+. .+|+..+..+++|+.|+|++|.+++
T Consensus 11 ~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~ 89 (597)
T 3oja_B 11 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 89 (597)
T ss_dssp CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCE
T ss_pred CCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCC
Confidence 78776666644 555544410 0 13456778888775 6888788999999999999999998
Q ss_pred CCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCC-C-C
Q 006747 105 DLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-N 180 (632)
Q Consensus 105 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~ 180 (632)
..|..|.++++|++|+|++|.+++..|..|. ++|++|+|++|.|++..+..|+++++|+.|+|++|.+++.+|. + .
T Consensus 90 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 169 (597)
T 3oja_B 90 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA 169 (597)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTT
T ss_pred CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhc
Confidence 8888999999999999999999987777665 7999999999999976666689999999999999999999886 3 7
Q ss_pred CCCCcEEEcccCCCCCCCcccccCCCCCCccCC
Q 006747 181 LSRLRHLNLSYNHLNGSVPLALQKFPPSSFEGN 213 (632)
Q Consensus 181 ~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n 213 (632)
+++|+.|+|++|.|++..+..+.++....+.+|
T Consensus 170 l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 170 TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp CTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 899999999999999765445555444444444
No 284
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.65 E-value=1.1e-15 Score=154.87 Aligned_cols=136 Identities=26% Similarity=0.292 Sum_probs=90.7
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
.++.|+|++|.+++..+ ..+..+++|+.|+|++|.|++..+ . ..+++|++|+|++|+|+ .+|..+. ++|++|+|
T Consensus 32 ~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSL-ATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TCCEEECTTSCCSEEEG-GGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCEEEcCCCcCCccCH-HHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 56778888888875444 367778888888888877774322 2 66777777777777776 5565543 56777777
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKF 205 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~ 205 (632)
++|+|++..|..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++..+..+..+
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l 171 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL 171 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCc
Confidence 777777665666777777777777777777665542 56677777777777764333333333
No 285
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.65 E-value=1.5e-16 Score=176.26 Aligned_cols=154 Identities=21% Similarity=0.254 Sum_probs=131.5
Q ss_pred CCCCCcceEecCCC-----------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeE
Q 006747 51 VCTSWVGITCTKNG-----------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFL 119 (632)
Q Consensus 51 ~c~~w~gv~c~~~~-----------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 119 (632)
.| .|.|+ |+... .+++.|+|+++.+++..|. .+.++++|++|+|++|++++..|..|.++++|++|
T Consensus 3 ~C-~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 79 (549)
T 2z81_A 3 SC-DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHL 79 (549)
T ss_dssp EE-CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cC-CCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEE
Confidence 46 79998 87421 3688999999999865554 79999999999999999998888999999999999
Q ss_pred eecCCcCCccCCCCcc--CCCcEEEccCCCCcc-cCCccccCCCCccceecccccccccCCC--C-CCCCCcEEEcccCC
Q 006747 120 YLQNNNFSGNIPSSLS--PQLNWVDLSFNSITG-NIPASIRNLSHLVGLNLQNNSLTGFIPN--F-NLSRLRHLNLSYNH 193 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~~~~p~--~-~~~~L~~l~ls~N~ 193 (632)
+|++|++++..|..+. ++|++|+|++|++++ .+|..++++++|+.|+|++|++.+.+|. + .+++|++|++++|+
T Consensus 80 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 80 DLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp ECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 9999999977666565 789999999999997 4678999999999999999996555553 3 78999999999999
Q ss_pred CCCCCcccccCCCC
Q 006747 194 LNGSVPLALQKFPP 207 (632)
Q Consensus 194 l~g~~p~~~~~~~~ 207 (632)
+++.+|..+.+++.
T Consensus 160 l~~~~~~~l~~l~~ 173 (549)
T 2z81_A 160 LRNYQSQSLKSIRD 173 (549)
T ss_dssp CCEECTTTTTTCSE
T ss_pred ccccChhhhhcccc
Confidence 99988888776553
No 286
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.65 E-value=2e-16 Score=165.11 Aligned_cols=158 Identities=25% Similarity=0.314 Sum_probs=124.0
Q ss_pred CCCCCCCCCCCCcceEecCC-----------CCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccC
Q 006747 44 NWNSSTSVCTSWVGITCTKN-----------GSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLS 112 (632)
Q Consensus 44 ~w~~~~~~c~~w~gv~c~~~-----------~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~ 112 (632)
.|....+.| .|.|+ |+.. ...++.|+|+++++++ +|++.+.++++|+.|+|++|++++..|..|.+
T Consensus 22 ~~~~~~~~C-~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (353)
T 2z80_A 22 SSNQASLSC-DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSS 98 (353)
T ss_dssp -----CCEE-CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCCccCCCC-CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCC
Confidence 455555666 79887 6532 1267889999999984 66667899999999999999999887888999
Q ss_pred CCCCCeEeecCCcCCccCCCC-cc--CCCcEEEccCCCCcccCCc--cccCCCCccceecccc-cccccCCC-C-CCCCC
Q 006747 113 LSSLRFLYLQNNNFSGNIPSS-LS--PQLNWVDLSFNSITGNIPA--SIRNLSHLVGLNLQNN-SLTGFIPN-F-NLSRL 184 (632)
Q Consensus 113 l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~l~l~~N-~l~~~~p~-~-~~~~L 184 (632)
+++|++|+|++|++++ +|.. +. ++|++|+|++|++++ +|. .+.++++|+.|++++| .+.+..+. + .+++|
T Consensus 99 l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 176 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFL 176 (353)
T ss_dssp CTTCCEEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEE
T ss_pred CCCCCEEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCC
Confidence 9999999999999995 4443 43 789999999999985 554 7899999999999999 46666554 3 78899
Q ss_pred cEEEcccCCCCCCCcccccCCC
Q 006747 185 RHLNLSYNHLNGSVPLALQKFP 206 (632)
Q Consensus 185 ~~l~ls~N~l~g~~p~~~~~~~ 206 (632)
+.|++++|++++..|..+.+++
T Consensus 177 ~~L~l~~n~l~~~~~~~l~~l~ 198 (353)
T 2z80_A 177 EELEIDASDLQSYEPKSLKSIQ 198 (353)
T ss_dssp EEEEEEETTCCEECTTTTTTCS
T ss_pred CEEECCCCCcCccCHHHHhccc
Confidence 9999999999987787776654
No 287
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.64 E-value=3.5e-16 Score=165.56 Aligned_cols=169 Identities=17% Similarity=0.170 Sum_probs=128.3
Q ss_pred CCCCCCCCCCCCcceEecCCC-------------------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCC
Q 006747 44 NWNSSTSVCTSWVGITCTKNG-------------------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSG 104 (632)
Q Consensus 44 ~w~~~~~~c~~w~gv~c~~~~-------------------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g 104 (632)
+|....+||+.|.+..|.... ..+..+++.++.+. .+|+..+..+++|+.|+|++|.+++
T Consensus 5 ~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~ 83 (390)
T 3o6n_A 5 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 83 (390)
T ss_dssp --CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCE
T ss_pred CCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccc
Confidence 677766677666655553111 24556788888876 6888788999999999999999998
Q ss_pred CCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--C
Q 006747 105 DLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--N 180 (632)
Q Consensus 105 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~ 180 (632)
..+..|..+++|++|+|++|++++..|..+. ++|++|+|++|+++...+..|+++++|+.|+|++|.+++..|.. .
T Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 163 (390)
T 3o6n_A 84 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA 163 (390)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSS
T ss_pred cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccC
Confidence 7788999999999999999999977777665 78999999999999654455799999999999999999988763 7
Q ss_pred CCCCcEEEcccCCCCCCCcccccCCCCCCccCC
Q 006747 181 LSRLRHLNLSYNHLNGSVPLALQKFPPSSFEGN 213 (632)
Q Consensus 181 ~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n 213 (632)
+++|+.|++++|++++.-...+.++....+.+|
T Consensus 164 l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 164 TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp CTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCCEEECCCCcCCccccccccccceeecccc
Confidence 899999999999998654344444443344443
No 288
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.64 E-value=1.2e-16 Score=182.17 Aligned_cols=178 Identities=21% Similarity=0.292 Sum_probs=116.1
Q ss_pred CChhHHHHHHHHHHhCC---CCCCCCCCCCCCCCCCCcceEecCCCCeEEEEEeCCCCc------------------cc-
Q 006747 22 DLNSDKQALLDFAANVP---HARKLNWNSSTSVCTSWVGITCTKNGSRVLAVRLPGVGL------------------YG- 79 (632)
Q Consensus 22 ~~~~~~~~l~~~~~~~~---~~~~~~w~~~~~~c~~w~gv~c~~~~~~v~~l~l~~~~l------------------~g- 79 (632)
....++++|+++..+.. ......|......+..|.+++++. .+++.++|.++++ .+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCc
Confidence 34578899999987762 122235654444445798888875 4555555544332 21
Q ss_pred -------ccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcc
Q 006747 80 -------PIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITG 150 (632)
Q Consensus 80 -------~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g 150 (632)
.++++.+..+.+|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..+. ++|++|||++|+|+
T Consensus 207 ~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 244557889999999999999999 78888999999999999999999 8998876 79999999999999
Q ss_pred cCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCcccccC
Q 006747 151 NIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQK 204 (632)
Q Consensus 151 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~ 204 (632)
.+|..|++|++|+.|+|++|.|+..+..+ .+++|+.|+|++|+|+|.+|..+..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhh
Confidence 78999999999999999999998654445 7899999999999999998877643
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.64 E-value=3.3e-16 Score=160.02 Aligned_cols=137 Identities=21% Similarity=0.248 Sum_probs=84.4
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCC-ccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLP-SNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
++..|+|++|.+. .+|. .+..+++|++|+|++|.+++..+ ..+.++++|++|+|++|.+++..|..+. ++|+.|+
T Consensus 79 ~L~~L~Ls~n~i~-~l~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 79 SLKYLDLSFNGVI-TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp CCCEEECCSCSEE-EEEE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred ccCEEECCCCccc-cChh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 4566777777766 3554 36666667777777766664443 4566666666666666666655555553 5666666
Q ss_pred ccCCCCcc-cCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccC
Q 006747 143 LSFNSITG-NIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQK 204 (632)
Q Consensus 143 Ls~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~ 204 (632)
|++|.+++ .+|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++..+..+..
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 66666665 45666666666666666666666665542 5566666666666666544444443
No 290
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.64 E-value=2.4e-16 Score=177.26 Aligned_cols=150 Identities=21% Similarity=0.241 Sum_probs=127.3
Q ss_pred cceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcC
Q 006747 56 VGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNF 126 (632)
Q Consensus 56 ~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 126 (632)
..|.|.+.+ ..++.|+|++|.|+ .||+..|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 357787422 35789999999998 57777899999999999999999987788899999999999999999
Q ss_pred CccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceeccccccccc-CCCC--CCCCCcEEEcccCCCCCCCccc
Q 006747 127 SGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGF-IPNF--NLSRLRHLNLSYNHLNGSVPLA 201 (632)
Q Consensus 127 ~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~-~p~~--~~~~L~~l~ls~N~l~g~~p~~ 201 (632)
++..+..|. ++|++|+|++|+|++..+..|+++++|+.|+|++|++++. +|.. .+++|++|+|++|+|++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 965555565 7899999999999987777899999999999999999875 3443 6899999999999999887777
Q ss_pred ccCCC
Q 006747 202 LQKFP 206 (632)
Q Consensus 202 ~~~~~ 206 (632)
+..+.
T Consensus 193 l~~L~ 197 (635)
T 4g8a_A 193 LRVLH 197 (635)
T ss_dssp GHHHH
T ss_pred ccchh
Confidence 65443
No 291
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.64 E-value=3.9e-15 Score=143.03 Aligned_cols=154 Identities=21% Similarity=0.275 Sum_probs=125.1
Q ss_pred ceEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc-
Q 006747 57 GITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS- 135 (632)
Q Consensus 57 gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~- 135 (632)
+..|.. ..+++.+++++ .+|.. ..++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.
T Consensus 4 ~C~C~~-----~~v~c~~~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 74 (208)
T 2o6s_A 4 RCSCSG-----TTVECYSQGRT-SVPTG---IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNK 74 (208)
T ss_dssp TCEEET-----TEEECCSSCCS-SCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred CCEECC-----CEEEecCCCcc-CCCCC---CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCC
Confidence 456743 46788899887 57653 356899999999999977777789999999999999999955554454
Q ss_pred -CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCC---CC
Q 006747 136 -PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPP---SS 209 (632)
Q Consensus 136 -~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~ 209 (632)
++|++|+|++|+|++..+..|.++++|+.|+|++|++++.++.. .+++|+.|+|++|+|++..+..+.+++. ..
T Consensus 75 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 154 (208)
T 2o6s_A 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154 (208)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEE
Confidence 79999999999999877777899999999999999999888763 7899999999999999766655655544 45
Q ss_pred ccCCCCCCCC
Q 006747 210 FEGNSMLCGP 219 (632)
Q Consensus 210 ~~~n~~~c~~ 219 (632)
+.+|...|..
T Consensus 155 l~~N~~~~~~ 164 (208)
T 2o6s_A 155 LHDNPWDCTC 164 (208)
T ss_dssp CCSCCBCCCT
T ss_pred ecCCCeecCC
Confidence 6777766543
No 292
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.64 E-value=7.2e-16 Score=167.71 Aligned_cols=158 Identities=20% Similarity=0.198 Sum_probs=133.1
Q ss_pred CCCCC-CCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCe
Q 006747 49 TSVCT-SWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRF 118 (632)
Q Consensus 49 ~~~c~-~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 118 (632)
.+.|. .|..|.|.+.. ..+..|+|++|.+++..| ..|.++++|+.|+|++|.+++..|..|.++++|++
T Consensus 6 ~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 84 (477)
T 2id5_A 6 RCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT 84 (477)
T ss_dssp TCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCccCCE
Confidence 34453 47889997532 357789999999996444 48999999999999999999888999999999999
Q ss_pred EeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCC
Q 006747 119 LYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHL 194 (632)
Q Consensus 119 L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l 194 (632)
|+|++|++++..+..|. ++|++|+|++|++++..|..|.++++|+.|+|++|.+++..+.. .+++|+.|+|++|++
T Consensus 85 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 164 (477)
T 2id5_A 85 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL 164 (477)
T ss_dssp EECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCC
T ss_pred EECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcC
Confidence 99999999954444454 79999999999999999999999999999999999999887753 789999999999999
Q ss_pred CCCCcccccCCCC
Q 006747 195 NGSVPLALQKFPP 207 (632)
Q Consensus 195 ~g~~p~~~~~~~~ 207 (632)
++..+..+..++.
T Consensus 165 ~~~~~~~l~~l~~ 177 (477)
T 2id5_A 165 TSIPTEALSHLHG 177 (477)
T ss_dssp SSCCHHHHTTCTT
T ss_pred cccChhHhcccCC
Confidence 9765555655543
No 293
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.63 E-value=1.4e-15 Score=153.69 Aligned_cols=143 Identities=25% Similarity=0.286 Sum_probs=124.3
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCc-CCccCCCCcc--CCCcEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNN-FSGNIPSSLS--PQLNWV 141 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~--~~L~~L 141 (632)
..+..|+|+++.+++ ++++.+..+++|++|+|++|.+++..|..|.++++|++|+|++|. +++..|..+. ++|++|
T Consensus 32 ~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 367899999999985 555589999999999999999998889999999999999999998 7755566665 799999
Q ss_pred EccCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCCCCCcccccCCCCC
Q 006747 142 DLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLNGSVPLALQKFPPS 208 (632)
Q Consensus 142 ~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 208 (632)
+|++|.+++..|..|.++++|+.|+|++|++++.++. + .+++|+.|+|++|++++..+..+..++..
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 179 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSL 179 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCcccc
Confidence 9999999998899999999999999999999988776 3 78999999999999996555556655443
No 294
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.63 E-value=1.3e-15 Score=164.61 Aligned_cols=146 Identities=22% Similarity=0.268 Sum_probs=105.1
Q ss_pred CCCCC-CCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCe
Q 006747 49 TSVCT-SWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRF 118 (632)
Q Consensus 49 ~~~c~-~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 118 (632)
.+.|. .|..|.|.+.+ ..+..|+|++|++++..| +.|.++++|+.|+|++|+|++..|..|.++++|++
T Consensus 49 ~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 127 (452)
T 3zyi_A 49 VCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNT 127 (452)
T ss_dssp TSEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CCEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChhhccCcccCCE
Confidence 34443 46789997532 367889999999996544 48999999999999999999888899999999999
Q ss_pred EeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCC--C-CCCCCcEEEcccCC
Q 006747 119 LYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN--F-NLSRLRHLNLSYNH 193 (632)
Q Consensus 119 L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~--~-~~~~L~~l~ls~N~ 193 (632)
|+|++|+|++..+..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|+..+.++. + .+++|+.|+|++|+
T Consensus 128 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 207 (452)
T 3zyi_A 128 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207 (452)
T ss_dssp EECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCc
Confidence 99999999955555554 7899999999999876665666666666666665332222222 1 34444444444444
Q ss_pred CC
Q 006747 194 LN 195 (632)
Q Consensus 194 l~ 195 (632)
|+
T Consensus 208 l~ 209 (452)
T 3zyi_A 208 IK 209 (452)
T ss_dssp CS
T ss_pred cc
Confidence 44
No 295
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.62 E-value=6.2e-16 Score=152.06 Aligned_cols=153 Identities=19% Similarity=0.258 Sum_probs=123.9
Q ss_pred CCCCCCCCCCCcceE--ecC------CCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCc-cCCCCCccccCCCC
Q 006747 45 WNSSTSVCTSWVGIT--CTK------NGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNH-LSGDLPSNVLSLSS 115 (632)
Q Consensus 45 w~~~~~~c~~w~gv~--c~~------~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 115 (632)
|.+..+.|..|.++. |.+ -...+..|+|++++++ .+|+..+.++++|+.|+|++|. +++..+..|.++++
T Consensus 3 ~cp~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~ 81 (239)
T 2xwt_C 3 CSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSK 81 (239)
T ss_dssp CCSSSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTT
T ss_pred CCCCCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcC
Confidence 445556665446555 864 2236889999999998 4666689999999999999997 88666678999999
Q ss_pred CCeEeecC-CcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCcc---ceecccc-cccccCCC-C-CCCCCc-
Q 006747 116 LRFLYLQN-NNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLV---GLNLQNN-SLTGFIPN-F-NLSRLR- 185 (632)
Q Consensus 116 L~~L~Ls~-N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~---~l~l~~N-~l~~~~p~-~-~~~~L~- 185 (632)
|++|+|++ |++++..+..|. ++|+.|+|++|++++ +|. |..+++|+ .|+|++| ++++.++. + .+++|+
T Consensus 82 L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~ 159 (239)
T 2xwt_C 82 VTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETL 159 (239)
T ss_dssp CCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEE
T ss_pred CcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhccee
Confidence 99999998 999966556664 789999999999996 776 88888888 9999999 99888775 3 788999
Q ss_pred EEEcccCCCCCCCccc
Q 006747 186 HLNLSYNHLNGSVPLA 201 (632)
Q Consensus 186 ~l~ls~N~l~g~~p~~ 201 (632)
.|++++|+++ .+|..
T Consensus 160 ~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 160 TLKLYNNGFT-SVQGY 174 (239)
T ss_dssp EEECCSCCCC-EECTT
T ss_pred EEEcCCCCCc-ccCHh
Confidence 9999999998 66653
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.62 E-value=2.4e-15 Score=155.47 Aligned_cols=160 Identities=23% Similarity=0.364 Sum_probs=131.3
Q ss_pred CCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEe
Q 006747 50 SVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLY 120 (632)
Q Consensus 50 ~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 120 (632)
+.| .|..+.|++.. ..++.|+|+++.+.+ +++..+.++++|+.|+|++|++++..|..|.++++|++|+
T Consensus 31 c~c-~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 31 CHC-HLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp CEE-ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred Ccc-cCCEEECCCCCccccCCCCCCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 334 79999998532 367889999999985 5555899999999999999999988899999999999999
Q ss_pred ecCCcCCccCCCCccCCCcEEEccCCCCcccCCccccCCCCccceecccccccc--cCCC-C-CCCCCcEEEcccCCCCC
Q 006747 121 LQNNNFSGNIPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTG--FIPN-F-NLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 121 Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~--~~p~-~-~~~~L~~l~ls~N~l~g 196 (632)
|++|+++ .+|..+.++|++|+|++|++++..+..|.++++|+.|+|++|.++. ..+. + .+ +|+.|++++|++++
T Consensus 109 L~~n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp CCSSCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCCCcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 9999999 7888888999999999999998777789999999999999999963 4444 2 34 88999999999885
Q ss_pred CCcccc-cCCCCCCccCCC
Q 006747 197 SVPLAL-QKFPPSSFEGNS 214 (632)
Q Consensus 197 ~~p~~~-~~~~~~~~~~n~ 214 (632)
+|..+ ..+....+.+|.
T Consensus 187 -l~~~~~~~L~~L~l~~n~ 204 (332)
T 2ft3_A 187 -IPKDLPETLNELHLDHNK 204 (332)
T ss_dssp -CCSSSCSSCSCCBCCSSC
T ss_pred -cCccccCCCCEEECCCCc
Confidence 55443 344444555543
No 297
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=4.7e-16 Score=144.10 Aligned_cols=132 Identities=25% Similarity=0.239 Sum_probs=113.8
Q ss_pred CeEEEEEeCCCCcc-cccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEE
Q 006747 65 SRVLAVRLPGVGLY-GPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWV 141 (632)
Q Consensus 65 ~~v~~l~l~~~~l~-g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L 141 (632)
.+++.|+|++++++ |.+|. .+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+. ++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 46889999999998 88987 588999999999999999965 7889999999999999999977776663 799999
Q ss_pred EccCCCCcccC-CccccCCCCccceecccccccccCC----CC-CCCCCcEEEcccCCCCCCCcc
Q 006747 142 DLSFNSITGNI-PASIRNLSHLVGLNLQNNSLTGFIP----NF-NLSRLRHLNLSYNHLNGSVPL 200 (632)
Q Consensus 142 ~Ls~N~l~g~~-p~~~~~l~~L~~l~l~~N~l~~~~p----~~-~~~~L~~l~ls~N~l~g~~p~ 200 (632)
+|++|++++.. +..+..+++|+.|+|++|.+++.++ .+ .+++|+.|++++|.+. .+|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999998642 2789999999999999999998877 22 7899999999999887 4454
No 298
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.61 E-value=2.8e-15 Score=151.88 Aligned_cols=147 Identities=26% Similarity=0.278 Sum_probs=79.4
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
++..|+|++|.+++ ++. .+.+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|. ++|+.|+|
T Consensus 56 ~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 56 RLTQLNLDRAELTK-LQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TCCEEECTTSCCCE-EEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccCc-ccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 45555666666553 332 245566666666666665 4555555666666666666666644334443 45666666
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCC---CCCccCCCCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFP---PSSFEGNSMLC 217 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~---~~~~~~n~~~c 217 (632)
++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|+ .+|..+.... ...+.+|++.|
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 666666554555556666666666666666554432 4556666666666665 4454433322 22334555444
No 299
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=3.4e-15 Score=141.69 Aligned_cols=124 Identities=28% Similarity=0.352 Sum_probs=108.3
Q ss_pred EEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCC
Q 006747 69 AVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFN 146 (632)
Q Consensus 69 ~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N 146 (632)
.+++++++++ .+|.. + .++|+.|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|. ++|+.|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSC-C--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 3566667776 67763 3 368999999999998 7889999999999999999999977777675 79999999999
Q ss_pred CCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCCCC
Q 006747 147 SITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLNGS 197 (632)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~ 197 (632)
+|++..|..|..+++|+.|+|++|+|++.++. + .+++|+.|+|++|.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99998888999999999999999999988775 3 789999999999998754
No 300
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.61 E-value=1.4e-15 Score=152.95 Aligned_cols=139 Identities=23% Similarity=0.247 Sum_probs=119.9
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
.+..|+|+++++++ +++..+.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..+. ++|++|+|
T Consensus 29 ~l~~L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCE-ECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccc-cCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 57899999999985 4545799999999999999999977777899999999999999999977777775 79999999
Q ss_pred cCCCCcccCCccccCCCCccceeccccccccc-CCC-C-CCCCCcEEEcccCCCCCCCcccccCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGF-IPN-F-NLSRLRHLNLSYNHLNGSVPLALQKF 205 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~-~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~~ 205 (632)
++|++++..+..++++++|+.|+|++|++++. +|. + .+++|+.|+|++|++++..+..+..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 172 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 172 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhh
Confidence 99999987777899999999999999999874 354 3 78999999999999997666655443
No 301
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.61 E-value=2.6e-15 Score=155.07 Aligned_cols=147 Identities=20% Similarity=0.330 Sum_probs=123.2
Q ss_pred CCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEe
Q 006747 50 SVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLY 120 (632)
Q Consensus 50 ~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 120 (632)
+.| .|..+.|++.+ ..++.|+|+++.+++ +++..+.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 29 c~c-~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 29 CQC-HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp CEE-ETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CcC-CCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 344 79999998532 357789999999985 5555799999999999999999988899999999999999
Q ss_pred ecCCcCCccCCCCccCCCcEEEccCCCCcccCCccccCCCCccceecccccccc--cCCCC--CCCCCcEEEcccCCCCC
Q 006747 121 LQNNNFSGNIPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTG--FIPNF--NLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 121 Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~--~~p~~--~~~~L~~l~ls~N~l~g 196 (632)
|++|+++ .+|..+.++|+.|+|++|++++..+..|.++++|+.|+|++|.++. ..+.. .+++|+.|++++|.++.
T Consensus 107 Ls~n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 107 LSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp CCSSCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCCCcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 9999999 7888888999999999999998777788999999999999999864 44432 67788888888888773
Q ss_pred CCcc
Q 006747 197 SVPL 200 (632)
Q Consensus 197 ~~p~ 200 (632)
+|.
T Consensus 186 -l~~ 188 (330)
T 1xku_A 186 -IPQ 188 (330)
T ss_dssp -CCS
T ss_pred -CCc
Confidence 444
No 302
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.61 E-value=9.4e-16 Score=171.96 Aligned_cols=152 Identities=22% Similarity=0.286 Sum_probs=88.0
Q ss_pred EEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCc-cCCCCcc--CCCcEEEc
Q 006747 67 VLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSG-NIPSSLS--PQLNWVDL 143 (632)
Q Consensus 67 v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~--~~L~~L~L 143 (632)
+..|+|++|.+.+..|...+..+++|+.|+|++|.+.+.+|..+.++++|++|+|++|++++ .+|..+. ++|+.|+|
T Consensus 401 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 480 (606)
T 3vq2_A 401 LQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDL 480 (606)
T ss_dssp CCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEEC
Confidence 44445555555544443345556666666666666665555566666666666666666665 2454443 56666666
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCC----CCccCCCCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPP----SSFEGNSMLC 217 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~----~~~~~n~~~c 217 (632)
++|++++.+|..|+++++|+.|+|++|++++.+|.. .+++|+.|+|++|+|+ .+|..+..++. ..+.+|++.|
T Consensus 481 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 481 SKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCC
T ss_pred CCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCccc
Confidence 666666666666666666666666666666655542 5566666666666666 45555544432 3455666655
Q ss_pred CC
Q 006747 218 GP 219 (632)
Q Consensus 218 ~~ 219 (632)
..
T Consensus 560 ~c 561 (606)
T 3vq2_A 560 IC 561 (606)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 303
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.61 E-value=1.5e-15 Score=163.99 Aligned_cols=133 Identities=23% Similarity=0.260 Sum_probs=80.5
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
.+..++|+++.+.+.+|. .+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+. ++|+.|+|
T Consensus 276 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKS-VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp CCCEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred CceEEEecCccccccchh-hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 455566666666654444 566666666666666666655555666666666666666666655554443 55666666
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCc
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVP 199 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p 199 (632)
++|++++..|..|..+++|+.|+|++|++++.++.. .+++|+.|+|++|++++..|
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 666666655666666666666666666666554432 45666666666666666555
No 304
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.61 E-value=1.3e-15 Score=170.75 Aligned_cols=163 Identities=16% Similarity=0.122 Sum_probs=136.1
Q ss_pred CCCCCCCCC-CCcceEecCC---------CCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCC
Q 006747 45 WNSSTSVCT-SWVGITCTKN---------GSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLS 114 (632)
Q Consensus 45 w~~~~~~c~-~w~gv~c~~~---------~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 114 (632)
|....+.|. .+..|.|.+. ...++.|+|++|.+++..| ..|+++++|++|+|++|++++..|..|.+++
T Consensus 3 ~~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 81 (606)
T 3t6q_A 3 SSDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQN-TTFSRLINLTFLDLTRCQIYWIHEDTFQSQH 81 (606)
T ss_dssp ---CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECT-TTSTTCTTCSEEECTTCCCCEECTTTTTTCT
T ss_pred cccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCCh-hHhccCccceEEECCCCccceeChhhccCcc
Confidence 333344442 3566888753 2368899999999996544 4899999999999999999988899999999
Q ss_pred CCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceeccccccccc-CCC-CCCCCCcEEEcc
Q 006747 115 SLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGF-IPN-FNLSRLRHLNLS 190 (632)
Q Consensus 115 ~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~-~p~-~~~~~L~~l~ls 190 (632)
+|++|+|++|++++..|..+. ++|++|+|++|++++..|..++++++|+.|+|++|++++. +|. ..+++|+.|+|+
T Consensus 82 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 161 (606)
T 3t6q_A 82 RLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQ 161 (606)
T ss_dssp TCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECC
T ss_pred ccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcc
Confidence 999999999999988888886 7999999999999987788999999999999999999985 344 378999999999
Q ss_pred cCCCCCCCcccccCCCCC
Q 006747 191 YNHLNGSVPLALQKFPPS 208 (632)
Q Consensus 191 ~N~l~g~~p~~~~~~~~~ 208 (632)
+|.+++..|..+..++..
T Consensus 162 ~n~l~~~~~~~~~~l~~L 179 (606)
T 3t6q_A 162 NNAIHYLSKEDMSSLQQA 179 (606)
T ss_dssp SSCCCEECHHHHHTTTTC
T ss_pred cCcccccChhhhhhhccc
Confidence 999998778777666544
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.60 E-value=1.4e-15 Score=170.46 Aligned_cols=140 Identities=24% Similarity=0.207 Sum_probs=124.0
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.+++.|+|+++.+++..+ ..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 468899999999986544 4799999999999999999988899999999999999999999988888886 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccc-cCCC-C-CCCCCcEEEcccCCCCCCCcccccCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTG-FIPN-F-NLSRLRHLNLSYNHLNGSVPLALQKF 205 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~-~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~~ 205 (632)
|++|++++..|..++++++|+.|+|++|++++ .+|. + .+++|++|+|++|++++..|..+..+
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 176 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFL 176 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHH
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhh
Confidence 99999998887899999999999999999986 4465 3 79999999999999998777766543
No 306
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.60 E-value=1.6e-15 Score=176.60 Aligned_cols=135 Identities=24% Similarity=0.255 Sum_probs=115.2
Q ss_pred hcCCCCCcEEeccCCccCCCCCc-cccCCCCCCeEeecCCcCCccC-----CCCcc--CCCcEEEccCCCCcccCCcccc
Q 006747 86 LEKLDSLMILSLRSNHLSGDLPS-NVLSLSSLRFLYLQNNNFSGNI-----PSSLS--PQLNWVDLSFNSITGNIPASIR 157 (632)
Q Consensus 86 l~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~-----p~~~~--~~L~~L~Ls~N~l~g~~p~~~~ 157 (632)
+.++++|+.|+|++|++++..+. .+..+++|++|+|++|.+++.. |..+. ++|+.|+|++|+|++.+|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 55789999999999999865443 4567899999999999997433 33343 6899999999999999999999
Q ss_pred CCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCCCCccCCCCCCCCC
Q 006747 158 NLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPPSSFEGNSMLCGPP 220 (632)
Q Consensus 158 ~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n~~~c~~~ 220 (632)
.+++|+.|+|++|+|++.++....++|+.|+|++|+|++.+|..+.++....+.+|++.|..+
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSS
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccc
Confidence 999999999999999998887655899999999999999999999888888899999988543
No 307
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.60 E-value=3.3e-15 Score=150.21 Aligned_cols=112 Identities=21% Similarity=0.241 Sum_probs=79.2
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+|+++.+.+ +++..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..+. ++|+.|+
T Consensus 52 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 356777777777763 4444677777777777777777766667777777777777777777755554444 5777777
Q ss_pred ccCCCCccc-CCccccCCCCccceecccccccccCC
Q 006747 143 LSFNSITGN-IPASIRNLSHLVGLNLQNNSLTGFIP 177 (632)
Q Consensus 143 Ls~N~l~g~-~p~~~~~l~~L~~l~l~~N~l~~~~p 177 (632)
|++|++++. +|..++++++|+.|+|++|++++.++
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 777777753 57777777777777777777776544
No 308
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.59 E-value=1.8e-15 Score=166.63 Aligned_cols=151 Identities=25% Similarity=0.361 Sum_probs=122.8
Q ss_pred CCCCCCCCCC----CCcce-EecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCe
Q 006747 44 NWNSSTSVCT----SWVGI-TCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRF 118 (632)
Q Consensus 44 ~w~~~~~~c~----~w~gv-~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 118 (632)
+|.....+|. .|.|+ .|.. .+++.|+|++++|++ ||.. + +++|+.|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 6766666774 49999 7875 479999999999997 8874 3 488999999999999 677 56899999
Q ss_pred EeecCCcCCccCCCCccCCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCC
Q 006747 119 LYLQNNNFSGNIPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSV 198 (632)
Q Consensus 119 L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~ 198 (632)
|+|++|+|++ +|. +..+|+.|+|++|+|++ +|. .+++|+.|+|++|+|++. |. .+++|+.|+|++|+|++ +
T Consensus 105 L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-p~-~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTML-PE-LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp EECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-CC-CCTTCCEEECCSSCCSC-C
T ss_pred EEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcC-CC-cCCCcCEEECCCCCCCC-c
Confidence 9999999997 888 77799999999999997 777 689999999999999985 44 67899999999999996 7
Q ss_pred ccccc-CCCCCCccCCC
Q 006747 199 PLALQ-KFPPSSFEGNS 214 (632)
Q Consensus 199 p~~~~-~~~~~~~~~n~ 214 (632)
|. +. ++....+.+|.
T Consensus 176 p~-l~~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 176 PE-LPESLEALDVSTNL 191 (571)
T ss_dssp CC-CCTTCCEEECCSSC
T ss_pred ch-hhCCCCEEECcCCC
Confidence 76 43 33333344443
No 309
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=4.2e-15 Score=154.21 Aligned_cols=133 Identities=13% Similarity=0.108 Sum_probs=95.0
Q ss_pred HhHhCccceeEEEEEEEcCCcEEEEEEeccccc---------------CHHH--------HHHHHHHHHhhcCCCCccce
Q 006747 341 AEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVM---------------GKRE--------FEQQMEVVGRLSQHPNVVPI 397 (632)
Q Consensus 341 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~---------------~~~~--------~~~e~~~l~~l~~h~niv~l 397 (632)
.+.||+|+||.||+|...+|+.||||+++.... .... ...|...|.++ .+.++...
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~gv~vp 178 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEEGFPVP 178 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHTTCSCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-HhcCCCCC
Confidence 357999999999999998999999998763211 1111 23455566666 34333222
Q ss_pred eEEEEeCCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCC
Q 006747 398 RAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDL 477 (632)
Q Consensus 398 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~ 477 (632)
.-+.. ...+|||||++++.|..+.... ....++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~~~-----------~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSSVP-----------DPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCCCS-----------CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred eeeec--cCceEEEEecCCccHhhhcccH-----------HHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 11211 2347999999998887654311 1245788999999999998 999999999999998877
Q ss_pred C----------eEEcccCCCCCC
Q 006747 478 Q----------GCISDFGLTPLM 490 (632)
Q Consensus 478 ~----------~ki~DfGla~~~ 490 (632)
. +.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3 899999976543
No 310
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=1e-15 Score=138.85 Aligned_cols=124 Identities=27% Similarity=0.304 Sum_probs=94.2
Q ss_pred CeEEEEEeCCCCcc-cccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEE
Q 006747 65 SRVLAVRLPGVGLY-GPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWV 141 (632)
Q Consensus 65 ~~v~~l~l~~~~l~-g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L 141 (632)
.+++.|++++++++ |.+|. .+..+++|+.|+|++|.+++. ..+.++++|++|+|++|++++.+|..+. ++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 35777888888887 77776 677888888888888888765 6777888888888888888876666553 678888
Q ss_pred EccCCCCccc-CCccccCCCCccceecccccccccCC---C-C-CCCCCcEEEccc
Q 006747 142 DLSFNSITGN-IPASIRNLSHLVGLNLQNNSLTGFIP---N-F-NLSRLRHLNLSY 191 (632)
Q Consensus 142 ~Ls~N~l~g~-~p~~~~~l~~L~~l~l~~N~l~~~~p---~-~-~~~~L~~l~ls~ 191 (632)
+|++|++++. .|..++.+++|+.|+|++|.+++.++ . + .+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888763 34778888888888888888887766 2 2 677888887763
No 311
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.58 E-value=1.6e-15 Score=165.12 Aligned_cols=146 Identities=18% Similarity=0.189 Sum_probs=99.2
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc---CCCcEEE
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS---PQLNWVD 142 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~~L~~L~ 142 (632)
.+..|+|++|.+++..+. .+++|+.|+|++|.|++..|..++++++|++|+|++|.+++.+|..+. ++|+.|+
T Consensus 100 ~L~~L~L~~N~l~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 100 SIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TCCEEECCSSCCCCEEEC----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECcCCcCCCCCcc----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 455667777777654332 356777777777777777777777777777777777777776666654 6777777
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCcccccCCC---CCCccCCCCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQKFP---PSSFEGNSMLCG 218 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~---~~~~~~n~~~c~ 218 (632)
|++|.|++. | .+..+++|+.|+|++|.|++.+|.+ .+++|+.|+|++|.|++ +|..+..++ ...+.+|...|+
T Consensus 176 Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred cCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 777777765 2 2335777777777777777776665 66777777777777774 565554443 334566666654
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.57 E-value=9.4e-15 Score=157.21 Aligned_cols=153 Identities=26% Similarity=0.263 Sum_probs=112.3
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCcccc-------------------------CCCCCCeE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVL-------------------------SLSSLRFL 119 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~-------------------------~l~~L~~L 119 (632)
.++..|+|++|.++ .+|++.|..+++|+.|+|++|.+++..+..|. ++++|++|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 35778888888887 56666788888888888888887754444444 45555555
Q ss_pred eecCCcCCccCCCCc-cCCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCC
Q 006747 120 YLQNNNFSGNIPSSL-SPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~~-~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g 196 (632)
+|++|+++ .+|... .++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+|++
T Consensus 191 ~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 191 NLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp ECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred cCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 55555555 333211 157888888888888888888899999999999999998887763 78899999999999997
Q ss_pred CCcccccCCC---CCCccCCCCCCCC
Q 006747 197 SVPLALQKFP---PSSFEGNSMLCGP 219 (632)
Q Consensus 197 ~~p~~~~~~~---~~~~~~n~~~c~~ 219 (632)
..+..+..++ ...+.+|++.|..
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred cChhHhccccCCCEEEcCCCCccCCC
Confidence 6666665554 4467888887754
No 313
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.57 E-value=7.2e-16 Score=173.74 Aligned_cols=140 Identities=19% Similarity=0.371 Sum_probs=126.3
Q ss_pred CeEEEEEeCCCCcccc-----------------cCchhhc--CCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCc
Q 006747 65 SRVLAVRLPGVGLYGP-----------------IPANTLE--KLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNN 125 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~-----------------lp~~~l~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 125 (632)
.++..|+|++|.++|. +|. .++ ++++|++|+|++|++.|.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 4688999999999996 888 688 99999999999999999999999999999999999998
Q ss_pred -CCc-cCCCCcc--------CCCcEEEccCCCCcccCCc--cccCCCCccceecccccccccCCCC-CCCCCcEEEcccC
Q 006747 126 -FSG-NIPSSLS--------PQLNWVDLSFNSITGNIPA--SIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYN 192 (632)
Q Consensus 126 -l~g-~~p~~~~--------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N 192 (632)
++| .+|..+. ++|+.|+|++|+++ .+|. .++++++|+.|+|++|+++|.+|.+ .+++|+.|+|++|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 999 8888764 68999999999999 8998 9999999999999999999888855 6788999999999
Q ss_pred CCCCCCcccccCCCC
Q 006747 193 HLNGSVPLALQKFPP 207 (632)
Q Consensus 193 ~l~g~~p~~~~~~~~ 207 (632)
+++ .+|..+.+++.
T Consensus 364 ~l~-~lp~~l~~l~~ 377 (636)
T 4eco_A 364 QIT-EIPANFCGFTE 377 (636)
T ss_dssp EEE-ECCTTSEEECT
T ss_pred ccc-cccHhhhhhcc
Confidence 998 88887766554
No 314
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.56 E-value=8.4e-15 Score=170.55 Aligned_cols=148 Identities=19% Similarity=0.206 Sum_probs=124.9
Q ss_pred CCcceEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCC-CccccCCCCCCeEeecCCcCCccCCC
Q 006747 54 SWVGITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDL-PSNVLSLSSLRFLYLQNNNFSGNIPS 132 (632)
Q Consensus 54 ~w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~ 132 (632)
+|..|.+ ...+++.|+|++|.+++..|. .|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 5666666 346788999999999865555 7999999999999999777676 77899999999999999999988888
Q ss_pred Ccc--CCCcEEEccCCCCcccCCcc--ccCCCCccceecccccccccCCC--C-CCCCCcEEEcccCCCCCCCcccccC
Q 006747 133 SLS--PQLNWVDLSFNSITGNIPAS--IRNLSHLVGLNLQNNSLTGFIPN--F-NLSRLRHLNLSYNHLNGSVPLALQK 204 (632)
Q Consensus 133 ~~~--~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~l~l~~N~l~~~~p~--~-~~~~L~~l~ls~N~l~g~~p~~~~~ 204 (632)
.|. ++|++|+|++|.+++.+|.. |+++++|+.|+|++|.+++..+. + .+++|+.|+|++|.+++..|..+..
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 886 78999999999999877765 89999999999999999887664 3 7899999999999999888876643
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.56 E-value=1.4e-14 Score=156.47 Aligned_cols=153 Identities=24% Similarity=0.225 Sum_probs=115.9
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCcc-------------------------ccCCCCCCeE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSN-------------------------VLSLSSLRFL 119 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~-------------------------~~~l~~L~~L 119 (632)
.++..|+|++|.++ .+|+..+..+++|++|+|++|.|++..+.. |.++++|++|
T Consensus 123 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 ASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp TTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 35778889998888 566667888888888888888887544434 4455566666
Q ss_pred eecCCcCCccCCCCc-cCCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCC
Q 006747 120 YLQNNNFSGNIPSSL-SPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~~-~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g 196 (632)
+|++|++++ +|... .++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+|++
T Consensus 202 ~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 202 NLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp ECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 666666663 33211 267889999999999888999999999999999999999887763 78999999999999997
Q ss_pred CCcccccCCC---CCCccCCCCCCCC
Q 006747 197 SVPLALQKFP---PSSFEGNSMLCGP 219 (632)
Q Consensus 197 ~~p~~~~~~~---~~~~~~n~~~c~~ 219 (632)
..+..+..++ ...+.+|++.|..
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEECST
T ss_pred cChHHhccccCCCEEEccCCCcCCCC
Confidence 6666665554 4567889887764
No 316
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.56 E-value=9.2e-15 Score=166.21 Aligned_cols=148 Identities=24% Similarity=0.256 Sum_probs=122.8
Q ss_pred CCcceEecCC---------CCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCC
Q 006747 54 SWVGITCTKN---------GSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNN 124 (632)
Q Consensus 54 ~w~gv~c~~~---------~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 124 (632)
.+..|.|+.. ..+++.|+|+++++++ +|+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 5 ~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp BSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred ECCeeECCCCCccccccccCCCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 3555677642 2468899999999985 55557999999999999999999888999999999999999999
Q ss_pred cCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcc
Q 006747 125 NFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPL 200 (632)
Q Consensus 125 ~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~ 200 (632)
++++..+..|. ++|++|+|++|++++..|..|+++++|+.|+|++|.+++.+|.. .+++|++|+|++|.+++..|.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99954444554 78999999999999877788999999999999999999887763 788999999999998877665
Q ss_pred cc
Q 006747 201 AL 202 (632)
Q Consensus 201 ~~ 202 (632)
.+
T Consensus 164 ~~ 165 (680)
T 1ziw_A 164 EL 165 (680)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 317
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.56 E-value=1.2e-14 Score=161.35 Aligned_cols=151 Identities=21% Similarity=0.262 Sum_probs=125.1
Q ss_pred CCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCC--CCCccccCCCCCCeEeecCCcCCccCCCCcc---CCC
Q 006747 64 GSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSG--DLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS---PQL 138 (632)
Q Consensus 64 ~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~~L 138 (632)
-.++..|+|++|.+++.+|. .+.++++|+.|+|++|++++ .+|..+.++++|++|+|++|++++.+|.... ++|
T Consensus 352 l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 35788999999999987876 78999999999999999996 3456789999999999999999987776543 789
Q ss_pred cEEEccCCCCcccCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCccc-ccCCCC---CCccCC
Q 006747 139 NWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLA-LQKFPP---SSFEGN 213 (632)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~-~~~~~~---~~~~~n 213 (632)
+.|+|++|++++.+|..+. ++|+.|+|++|+++..++.. .+++|+.|+|++|+|+ .+|.. +..++. ..+.+|
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCC
Confidence 9999999999988887765 78999999999999665543 8899999999999999 56665 655544 456788
Q ss_pred CCCCC
Q 006747 214 SMLCG 218 (632)
Q Consensus 214 ~~~c~ 218 (632)
++.|.
T Consensus 508 ~~~c~ 512 (562)
T 3a79_B 508 PWDCT 512 (562)
T ss_dssp CBCCC
T ss_pred CcCCC
Confidence 87764
No 318
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=1.2e-14 Score=138.02 Aligned_cols=124 Identities=22% Similarity=0.283 Sum_probs=108.9
Q ss_pred CCCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeE
Q 006747 49 TSVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFL 119 (632)
Q Consensus 49 ~~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 119 (632)
.+.| .|..|.|+++. ..++.|+|++|.++ .+|. .+.++++|+.|+|++|.|++..+..|.++++|++|
T Consensus 7 ~C~C-~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L 83 (193)
T 2wfh_A 7 ECTC-LDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 83 (193)
T ss_dssp TCEE-ETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEe-CCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEE
Confidence 3445 68889997542 35788999999998 7885 89999999999999999998888899999999999
Q ss_pred eecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceeccccccccc
Q 006747 120 YLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGF 175 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 175 (632)
+|++|+|++..|..|. ++|+.|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 84 ~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 84 ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9999999977777776 7999999999999977777899999999999999999754
No 319
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.55 E-value=3.3e-15 Score=152.99 Aligned_cols=136 Identities=22% Similarity=0.173 Sum_probs=86.7
Q ss_pred CeEEEEEeCCCCcccccC---chhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCcc--CC-CCc---c
Q 006747 65 SRVLAVRLPGVGLYGPIP---ANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGN--IP-SSL---S 135 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp---~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p-~~~---~ 135 (632)
.++..|+|++|.+.+..+ ...+..+++|++|+|++|.+++..|..|+++++|++|+|++|++.+. ++ ... .
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 356677777777776554 12344677777777777777777677777777777777777776642 22 111 1
Q ss_pred CCCcEEEccCCCCcccCCc----cccCCCCccceecccccccccCCC-C-C---CCCCcEEEcccCCCCCCCcccc
Q 006747 136 PQLNWVDLSFNSITGNIPA----SIRNLSHLVGLNLQNNSLTGFIPN-F-N---LSRLRHLNLSYNHLNGSVPLAL 202 (632)
Q Consensus 136 ~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~l~l~~N~l~~~~p~-~-~---~~~L~~l~ls~N~l~g~~p~~~ 202 (632)
++|++|+|++|++++ +|. .++++++|+.|+|++|++++..|. + . +++|++|+|++|+|+ .+|..+
T Consensus 197 ~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~ 270 (310)
T 4glp_A 197 PAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGL 270 (310)
T ss_dssp CCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCC
T ss_pred CCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhh
Confidence 567777777777752 232 245667777777777777776443 1 2 257777777777777 555543
No 320
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=2.2e-15 Score=154.46 Aligned_cols=127 Identities=19% Similarity=0.275 Sum_probs=80.1
Q ss_pred EEEEEeCCCCc-ccccCchhhc-------CCCCCcEEeccCCccCCCCCccc--cCCCCCCeEeecCCcCCccCCCCcc-
Q 006747 67 VLAVRLPGVGL-YGPIPANTLE-------KLDSLMILSLRSNHLSGDLPSNV--LSLSSLRFLYLQNNNFSGNIPSSLS- 135 (632)
Q Consensus 67 v~~l~l~~~~l-~g~lp~~~l~-------~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~- 135 (632)
+..++|+++.+ .+.+|. .+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..+.
T Consensus 65 L~~L~L~~n~l~~~~~~~-~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~ 142 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPS-RILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE 142 (312)
T ss_dssp HHHCCCCEEEEEEEECBH-HHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH
T ss_pred HhhcccccccccCCCcCH-HHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH
Confidence 45566666666 345554 233 56677777777777776666665 6677777777777777655 54432
Q ss_pred ------CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCC---C---CCCCCCcEEEcccCCCC
Q 006747 136 ------PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIP---N---FNLSRLRHLNLSYNHLN 195 (632)
Q Consensus 136 ------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p---~---~~~~~L~~l~ls~N~l~ 195 (632)
++|++|+|++|++++..|..|+++++|+.|+|++|++.+.++ . ..+++|+.|+|++|+|+
T Consensus 143 l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp HHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred HHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 567777777777766666667777777777777777655421 1 25566666666666666
No 321
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.55 E-value=8.2e-15 Score=139.53 Aligned_cols=133 Identities=19% Similarity=0.348 Sum_probs=110.7
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
++..++++++++. .+| .+..+++|+.|+|++|.++ .++.+..+++|++|+|++|++++..|..+. ++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 5788999999988 677 4888999999999999775 345788999999999999999987777776 78999999
Q ss_pred cCCCCcccCCccccCCCCccceeccccc-ccccCCCC-CCCCCcEEEcccCCCCCCCcccccCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNS-LTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQKFP 206 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~-l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~ 206 (632)
++|++++..|..++.+++|+.|+|++|. ++.. |.+ .+++|+.|++++|++++ ++ .+..++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~ 181 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHD-YR-GIEDFP 181 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEECTTBCCCC-CT-TGGGCS
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEECCCCCCcC-hH-HhccCC
Confidence 9999998889999999999999999998 5544 444 78999999999999985 33 444443
No 322
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.55 E-value=2.6e-15 Score=173.09 Aligned_cols=139 Identities=19% Similarity=0.336 Sum_probs=125.4
Q ss_pred CeEEEEEeCCCCccc-----------------ccCchhhc--CCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCc
Q 006747 65 SRVLAVRLPGVGLYG-----------------PIPANTLE--KLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNN 125 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g-----------------~lp~~~l~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 125 (632)
.++..|+|++|.|+| .+|. .++ +|++|+.|+|++|++.|.+|..|++|++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 468899999999999 4888 566 99999999999999999999999999999999999998
Q ss_pred -CCc-cCCCCcc---------CCCcEEEccCCCCcccCCc--cccCCCCccceecccccccccCCCC-CCCCCcEEEccc
Q 006747 126 -FSG-NIPSSLS---------PQLNWVDLSFNSITGNIPA--SIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSY 191 (632)
Q Consensus 126 -l~g-~~p~~~~---------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~ 191 (632)
|+| .+|..+. ++|+.|+|++|+|+ .+|. .|+++++|+.|+|++|+++ .+|.+ .+++|+.|+|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 998 8887654 38999999999999 8999 9999999999999999999 66665 789999999999
Q ss_pred CCCCCCCcccccCCCC
Q 006747 192 NHLNGSVPLALQKFPP 207 (632)
Q Consensus 192 N~l~g~~p~~~~~~~~ 207 (632)
|+|+ .+|..+.+++.
T Consensus 605 N~l~-~lp~~l~~l~~ 619 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTD 619 (876)
T ss_dssp SCCS-CCCTTSCEECT
T ss_pred Cccc-cchHHHhhccc
Confidence 9999 89987776554
No 323
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.55 E-value=8.8e-15 Score=164.04 Aligned_cols=143 Identities=20% Similarity=0.190 Sum_probs=95.3
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCcc-ccCCCCCCeEeecCCcCCccCCCCcc--CCCcEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSN-VLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWV 141 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L 141 (632)
.++..|+|++|.+.+..|. .+..+++|+.|+|++|.+.+..|.. +.++++|++|+|++|.+++..|..+. ++|+.|
T Consensus 376 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 3566777777777755444 6777777777777777777665543 66777777777777777766666554 567777
Q ss_pred EccCCCCccc---CCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCCC
Q 006747 142 DLSFNSITGN---IPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPPS 208 (632)
Q Consensus 142 ~Ls~N~l~g~---~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 208 (632)
+|++|++++. .+..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++.+|..+..++..
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 7777777652 2345667777777777777777666542 56677777777777776666666555543
No 324
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.54 E-value=2.9e-14 Score=147.17 Aligned_cols=140 Identities=25% Similarity=0.362 Sum_probs=119.0
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccC--CCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLS--GDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~L 143 (632)
.+..|+++++.+. .+++..+.++++|+.|+|++|.+. +..+..+.++++|++|+|++|.++ .+|..+.++|+.|+|
T Consensus 122 ~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~L~~L~l 199 (330)
T 1xku_A 122 TLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHL 199 (330)
T ss_dssp TCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEEC
T ss_pred cccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccccccCCEEEC
Confidence 4556666666666 355557889999999999999996 477888999999999999999998 678888899999999
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPPS 208 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 208 (632)
++|++++..|..|..+++|+.|+|++|.+++..+.. .+++|+.|+|++|+++ .+|..+..++..
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L 265 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYI 265 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCc
Confidence 999999988999999999999999999999988753 7899999999999999 788877665543
No 325
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.54 E-value=1.2e-14 Score=163.56 Aligned_cols=153 Identities=24% Similarity=0.311 Sum_probs=132.6
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCc-cCCCCcc--CCCcEEE
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSG-NIPSSLS--PQLNWVD 142 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~--~~L~~L~ 142 (632)
.+..+++.+++..+..+...+..+.+|+.++++.|.+.+..|..+..+++|++|+|++|++.+ .+|..+. ++|+.||
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 445667777777777777778899999999999999999999999999999999999998654 5666665 7899999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCC----CCCccCCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFP----PSSFEGNSML 216 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~----~~~~~~n~~~ 216 (632)
|++|+|++.+|..|.++++|+.|+|++|+|++.+|.. .+++|+.|||++|+|++..|..+..++ .....+|++.
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 9999999999999999999999999999999988863 789999999999999999998887663 3467899988
Q ss_pred CC
Q 006747 217 CG 218 (632)
Q Consensus 217 c~ 218 (632)
|.
T Consensus 581 C~ 582 (635)
T 4g8a_A 581 CT 582 (635)
T ss_dssp CS
T ss_pred cc
Confidence 85
No 326
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.54 E-value=1e-14 Score=160.30 Aligned_cols=150 Identities=23% Similarity=0.276 Sum_probs=111.3
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCC--CCCccccCCCCCCeEeecCCcCCccCCCC-cc--CCCc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSG--DLPSNVLSLSSLRFLYLQNNNFSGNIPSS-LS--PQLN 139 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~ 139 (632)
..+..|+|++|.+++.+|. .+..+++|+.|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +. ++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4577888888888877776 67888888888888888886 55677888888888888888888756654 32 6788
Q ss_pred EEEccCCCCcccCCccccCCCCccceecccccccccCCC-CCCCCCcEEEcccCCCCCCCccc-ccCCCC---CCccCCC
Q 006747 140 WVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-FNLSRLRHLNLSYNHLNGSVPLA-LQKFPP---SSFEGNS 214 (632)
Q Consensus 140 ~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~L~~l~ls~N~l~g~~p~~-~~~~~~---~~~~~n~ 214 (632)
.|+|++|++++.+|..+. ++|+.|+|++|+++..++. +.+++|+.|+|++|+|+ .+|.. +..++. ..+.+|+
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCC
Confidence 888888888877777665 6888888888888844333 37788888888888888 56654 554443 4456777
Q ss_pred CCCC
Q 006747 215 MLCG 218 (632)
Q Consensus 215 ~~c~ 218 (632)
..|.
T Consensus 480 ~~c~ 483 (520)
T 2z7x_B 480 WDCS 483 (520)
T ss_dssp BCCC
T ss_pred Cccc
Confidence 6664
No 327
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.53 E-value=3.8e-14 Score=152.44 Aligned_cols=145 Identities=23% Similarity=0.305 Sum_probs=104.9
Q ss_pred CCCC-CCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeE
Q 006747 50 SVCT-SWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFL 119 (632)
Q Consensus 50 ~~c~-~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 119 (632)
+.|. .|..|.|.+.. ..+..|+|++|.+.+ +++..|.++++|+.|+|++|++++..+..|.++++|++|
T Consensus 39 C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L 117 (440)
T 3zyj_A 39 CSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 117 (440)
T ss_dssp SEECTTSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCE-ECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEE
T ss_pred CEeCCCCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCe-eCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEE
Confidence 3443 47789997532 246779999999985 444578999999999999999997777889999999999
Q ss_pred eecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCC--C-CCCCCcEEEcccCCC
Q 006747 120 YLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN--F-NLSRLRHLNLSYNHL 194 (632)
Q Consensus 120 ~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~--~-~~~~L~~l~ls~N~l 194 (632)
+|++|+|++..+..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|+..+.++. + .+++|+.|+|++|+|
T Consensus 118 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 197 (440)
T 3zyj_A 118 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 197 (440)
T ss_dssp ECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCC
T ss_pred ECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcC
Confidence 9999999855444554 6888999999888876666677777777777776433333332 1 455566666666655
Q ss_pred C
Q 006747 195 N 195 (632)
Q Consensus 195 ~ 195 (632)
+
T Consensus 198 ~ 198 (440)
T 3zyj_A 198 R 198 (440)
T ss_dssp S
T ss_pred c
Confidence 5
No 328
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.53 E-value=3.4e-14 Score=157.22 Aligned_cols=146 Identities=18% Similarity=0.220 Sum_probs=95.7
Q ss_pred EEEEEeCCCCcccccC-chhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEccC
Q 006747 67 VLAVRLPGVGLYGPIP-ANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLSF 145 (632)
Q Consensus 67 v~~l~l~~~~l~g~lp-~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~ 145 (632)
+..|+|++|.+++-.+ ...+..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|..+.++|+.|||++
T Consensus 363 L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~Ls~ 440 (549)
T 2z81_A 363 LQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSN 440 (549)
T ss_dssp CCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEECCS
T ss_pred CcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEECCC
Confidence 4445555555442111 123555666666666666666 45666666666666666666665 44555556677777777
Q ss_pred CCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCC---CCccCCCCCCC
Q 006747 146 NSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPP---SSFEGNSMLCG 218 (632)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~~~~n~~~c~ 218 (632)
|+|++.+ ..+++|+.|+|++|+|+..++...+++|+.|+|++|+|++.+|..+..++. ..+.+|++.|.
T Consensus 441 N~l~~~~----~~l~~L~~L~Ls~N~l~~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 441 NNLDSFS----LFLPRLQELYISRNKLKTLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp SCCSCCC----CCCTTCCEEECCSSCCSSCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CChhhhc----ccCChhcEEECCCCccCcCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 7777532 478889999999999985443347889999999999999888876665554 45677877664
No 329
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.52 E-value=3e-15 Score=153.41 Aligned_cols=133 Identities=22% Similarity=0.242 Sum_probs=82.5
Q ss_pred eEEEEEeCCCCcccccCchhh-cCCCCCcEEeccCCccCCCCCccccCC-----CCCCeEeecCCcCCccCCCCcc--CC
Q 006747 66 RVLAVRLPGVGLYGPIPANTL-EKLDSLMILSLRSNHLSGDLPSNVLSL-----SSLRFLYLQNNNFSGNIPSSLS--PQ 137 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l-~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~--~~ 137 (632)
++..|+|+++.++|.+|...+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..+. ++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 566677777777766666322 6677777777777777655 6666655 6677777777777655555554 56
Q ss_pred CcEEEccCCCCccc--CCccc--cCCCCccceecccccccccC--C-CC--CCCCCcEEEcccCCCCCCCc
Q 006747 138 LNWVDLSFNSITGN--IPASI--RNLSHLVGLNLQNNSLTGFI--P-NF--NLSRLRHLNLSYNHLNGSVP 199 (632)
Q Consensus 138 L~~L~Ls~N~l~g~--~p~~~--~~l~~L~~l~l~~N~l~~~~--p-~~--~~~~L~~l~ls~N~l~g~~p 199 (632)
|+.|+|++|++.|. +|..+ +++++|+.|+|++|++++.. + .. .+++|+.|+|++|+|++.+|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 77777777766654 23333 66666666666666666321 1 11 45666666666666666553
No 330
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.52 E-value=1.2e-14 Score=138.38 Aligned_cols=128 Identities=20% Similarity=0.327 Sum_probs=107.8
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+++++.+. .++ .+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+. ++|+.|+
T Consensus 66 ~~L~~L~l~~n~~~--~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS--CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC--cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 35888999999664 333 689999999999999999988899999999999999999999987776665 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g 196 (632)
|++|.+.+.+| .+..+++|+.|+|++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99998334566 799999999999999999986543488999999999999874
No 331
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.52 E-value=3.7e-14 Score=161.23 Aligned_cols=151 Identities=23% Similarity=0.257 Sum_probs=111.7
Q ss_pred EEEeCCCCcc--cccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCC--------Ccc--C
Q 006747 69 AVRLPGVGLY--GPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS--------SLS--P 136 (632)
Q Consensus 69 ~l~l~~~~l~--g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--------~~~--~ 136 (632)
.+++.++.+. +.+|. .+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+. .+. +
T Consensus 458 ~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~ 536 (680)
T 1ziw_A 458 RLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLS 536 (680)
T ss_dssp EEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCT
T ss_pred cchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCC
Confidence 3344444433 34554 677888888888888888877777788888888888888888753221 122 6
Q ss_pred CCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccc----cCCCCCCc
Q 006747 137 QLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLAL----QKFPPSSF 210 (632)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~----~~~~~~~~ 210 (632)
+|+.|+|++|+|+...+..|.++++|+.|+|++|++++.++.. .+++|+.|+|++|+|++..|..+ .++....+
T Consensus 537 ~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l 616 (680)
T 1ziw_A 537 HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDM 616 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEEC
T ss_pred CCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEc
Confidence 7888999999988544456889999999999999999877763 78899999999999997776643 45666678
Q ss_pred cCCCCCCCCC
Q 006747 211 EGNSMLCGPP 220 (632)
Q Consensus 211 ~~n~~~c~~~ 220 (632)
.+|++.|..+
T Consensus 617 ~~N~~~c~c~ 626 (680)
T 1ziw_A 617 RFNPFDCTCE 626 (680)
T ss_dssp TTCCCCBCCC
T ss_pred cCCCcccCCc
Confidence 8999888643
No 332
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.52 E-value=8.4e-14 Score=145.68 Aligned_cols=139 Identities=24% Similarity=0.291 Sum_probs=118.2
Q ss_pred CCCCCCcceEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCcccc-CCCCCCeEeecCCcCCc
Q 006747 50 SVCTSWVGITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVL-SLSSLRFLYLQNNNFSG 128 (632)
Q Consensus 50 ~~c~~w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g 128 (632)
..|. ....|.. ..+++++++|+ .+|.. + ...++.|+|++|+|++..+..+. ++++|++|+|++|+|++
T Consensus 10 ~~Cp--~~C~C~~-----~~l~c~~~~l~-~iP~~-~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~ 78 (361)
T 2xot_A 10 VSCP--ANCLCAS-----NILSCSKQQLP-NVPQS-L--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNF 78 (361)
T ss_dssp TTCC--TTCEEET-----TEEECCSSCCS-SCCSS-C--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCE
T ss_pred CCCC--CCCEECC-----CEEEeCCCCcC-ccCcc-C--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCc
Confidence 4563 5677864 25789999998 58863 3 34689999999999987777787 99999999999999997
Q ss_pred cCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcc
Q 006747 129 NIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPL 200 (632)
Q Consensus 129 ~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~ 200 (632)
..|..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|++++..|.. .+++|+.|+|++|+|++ +|.
T Consensus 79 i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~ 153 (361)
T 2xot_A 79 ISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPV 153 (361)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCG
T ss_pred cChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCH
Confidence 7777675 79999999999999888888999999999999999999987763 78999999999999995 444
No 333
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.52 E-value=9.2e-15 Score=159.21 Aligned_cols=128 Identities=30% Similarity=0.238 Sum_probs=67.7
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCC-------------
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS------------- 132 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~------------- 132 (632)
+++.|+|++|.+++. ++..|..+++|+.|+|++|.+++.+| +..+++|++|+|++|.|++..+.
T Consensus 35 ~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l 111 (487)
T 3oja_A 35 NVKELDLSGNPLSQI-SAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (487)
T ss_dssp GCCEEECCSSCCCCC-CGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CccEEEeeCCcCCCC-CHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcC
Confidence 455566666666542 22355566666666666666654433 55555555555555554432110
Q ss_pred -----CccCCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCC---CCCCCcEEEcccCCCCC
Q 006747 133 -----SLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF---NLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 133 -----~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~L~~l~ls~N~l~g 196 (632)
...++|+.|+|++|.|++..|..++++++|+.|+|++|.+++.+|.. .+++|+.|+|++|.|++
T Consensus 112 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 11134556666666666555555666666666666666666544431 34555555555555553
No 334
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.52 E-value=3.6e-14 Score=146.68 Aligned_cols=145 Identities=23% Similarity=0.351 Sum_probs=106.1
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccC--CCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLS--GDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~L 143 (632)
.+..|+|++|.+. .+|+..+..+++|+.|+|++|.++ +..|..+..+ +|++|+|++|+++ .+|..+.++|+.|+|
T Consensus 124 ~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~~~L~~L~l 200 (332)
T 2ft3_A 124 SLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLPETLNELHL 200 (332)
T ss_dssp TCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSCSSCSCCBC
T ss_pred cCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCccccCCCCEEEC
Confidence 3445555555555 344445666777777777777764 3556666666 7777777777776 366666678999999
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCCCCCcccccCCCCC---CccCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLNGSVPLALQKFPPS---SFEGNS 214 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~~---~~~~n~ 214 (632)
++|.+++..|..|..+++|+.|+|++|++++.++. + .+++|+.|+|++|+|+ .+|..+..++.. .+.+|.
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCC
Confidence 99999988888899999999999999999988775 3 7889999999999998 788777665543 344444
No 335
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.52 E-value=3.6e-14 Score=158.72 Aligned_cols=109 Identities=18% Similarity=0.177 Sum_probs=94.3
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
.+..|+|+++.+++..| ..|+.+++|+.|+|++|.|++..|..|+++++|++|+|++|.|++..+..|. ++|++|+|
T Consensus 76 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 57889999999986544 4799999999999999999988888889999999999999999944444343 78999999
Q ss_pred cCCCCcccCCccccCCCCccceeccccccccc
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGF 175 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 175 (632)
++|.|++..|..|+++++|+.|+|++|.+++.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 99999998888999999999999999998875
No 336
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.51 E-value=2.6e-14 Score=158.85 Aligned_cols=154 Identities=21% Similarity=0.275 Sum_probs=131.7
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCC-ccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLP-SNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWV 141 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L 141 (632)
.++..|+|+++.+.+ +|+. +..+++|+.|+|++|.+.+..| ..+.++++|++|+|++|.+++.+|..+. ++|+.|
T Consensus 373 ~~L~~L~l~~n~l~~-~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVIT-MSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEEE-EEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCcccc-cccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 467889999999985 5553 8999999999999999997766 5788999999999999999988888775 799999
Q ss_pred EccCCCCc-ccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCC---CCccCCCC
Q 006747 142 DLSFNSIT-GNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPP---SSFEGNSM 215 (632)
Q Consensus 142 ~Ls~N~l~-g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~~~~n~~ 215 (632)
+|++|.++ +.+|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++..|..+..++. ..+.+|+.
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 99999998 679999999999999999999999987753 7899999999999999887777766554 45678887
Q ss_pred CCCCC
Q 006747 216 LCGPP 220 (632)
Q Consensus 216 ~c~~~ 220 (632)
.|..+
T Consensus 531 ~~~~~ 535 (570)
T 2z63_A 531 DCSCP 535 (570)
T ss_dssp CCCTT
T ss_pred cCCCc
Confidence 77543
No 337
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.51 E-value=2.8e-14 Score=155.14 Aligned_cols=143 Identities=20% Similarity=0.143 Sum_probs=124.9
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+|++|.+++..|. .|.++++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..+. ++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeChh-hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 4688999999999965555 899999999999999999976667789999999999999999988887776 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCC--CCCCCCcEEEcccCCCCCCCcccccCCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN--FNLSRLRHLNLSYNHLNGSVPLALQKFPPS 208 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~--~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 208 (632)
|++|.+++..|..|.++++|+.|+|++|++++.++. ..+++|+.|+|++|.+++..+..+..++..
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L 202 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRL 202 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCccc
Confidence 999999998999999999999999999999987664 278999999999999997666666655443
No 338
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.51 E-value=3.6e-14 Score=157.67 Aligned_cols=148 Identities=24% Similarity=0.260 Sum_probs=123.7
Q ss_pred CeEEEEEeCCCCccccc--CchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCC-Ccc--CCCc
Q 006747 65 SRVLAVRLPGVGLYGPI--PANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS-SLS--PQLN 139 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~l--p~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~--~~L~ 139 (632)
.++..|+|+++.+++.. |. .+..+++|+.|+|++|.+.+. |..+..+++|++|+|++|.+++..|. .+. ++|+
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~-~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQ-SDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEH-HHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCEEeCcCCccCccccccc-cccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 46888999999998653 44 688999999999999999965 44599999999999999999977663 333 7899
Q ss_pred EEEccCCCCcccCCccccCCCCccceeccccccc-ccCCCC--CCCCCcEEEcccCCCCCCCcccccCCCCC---CccCC
Q 006747 140 WVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLT-GFIPNF--NLSRLRHLNLSYNHLNGSVPLALQKFPPS---SFEGN 213 (632)
Q Consensus 140 ~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~-~~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~---~~~~n 213 (632)
+|+|++|.+++.+|..+.++++|+.|+|++|.++ +.+|.. .+++|+.|+|++|++++..|..+..++.. .+.+|
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 9999999999999999999999999999999998 566653 78999999999999998888888766544 34455
Q ss_pred C
Q 006747 214 S 214 (632)
Q Consensus 214 ~ 214 (632)
.
T Consensus 505 ~ 505 (570)
T 2z63_A 505 Q 505 (570)
T ss_dssp C
T ss_pred c
Confidence 3
No 339
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.51 E-value=1.1e-14 Score=131.99 Aligned_cols=119 Identities=20% Similarity=0.275 Sum_probs=102.0
Q ss_pred CCCCCcEEeccCCccC-CCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccc
Q 006747 88 KLDSLMILSLRSNHLS-GDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVG 164 (632)
Q Consensus 88 ~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 164 (632)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+. ++|++|+|++|.+++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3578999999999998 89999999999999999999999966 4444 79999999999999889999999999999
Q ss_pred eecccccccccC--CCC-CCCCCcEEEcccCCCCCCCc---ccccCCCCC
Q 006747 165 LNLQNNSLTGFI--PNF-NLSRLRHLNLSYNHLNGSVP---LALQKFPPS 208 (632)
Q Consensus 165 l~l~~N~l~~~~--p~~-~~~~L~~l~ls~N~l~g~~p---~~~~~~~~~ 208 (632)
|+|++|++++.. ..+ .+++|+.|++++|.+++..+ ..+..++..
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L 142 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQL 142 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCc
Confidence 999999999853 333 78999999999999996655 355555543
No 340
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.51 E-value=2.5e-14 Score=132.32 Aligned_cols=119 Identities=24% Similarity=0.305 Sum_probs=102.5
Q ss_pred CCCCCcEEeccCCccC-CCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccc
Q 006747 88 KLDSLMILSLRSNHLS-GDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVG 164 (632)
Q Consensus 88 ~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 164 (632)
..++|+.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+. ++|++|+|++|++++.+|..+.++++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 88999999999999999999999965 4444 78999999999999889999999999999
Q ss_pred eecccccccccC--CCC-CCCCCcEEEcccCCCCCCCc---ccccCCCCC
Q 006747 165 LNLQNNSLTGFI--PNF-NLSRLRHLNLSYNHLNGSVP---LALQKFPPS 208 (632)
Q Consensus 165 l~l~~N~l~~~~--p~~-~~~~L~~l~ls~N~l~g~~p---~~~~~~~~~ 208 (632)
|+|++|++++.. +.+ .+++|+.|++++|.+++..+ ..+..++..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L 149 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQL 149 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccC
Confidence 999999999864 333 78999999999999996554 356655544
No 341
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.51 E-value=6.4e-14 Score=139.76 Aligned_cols=141 Identities=22% Similarity=0.249 Sum_probs=113.6
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
.++..|++++++++ .+| .+..+++|+.|+|++|++++..| +.++++|++|+|++|++++ +|....++|+.|+|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccccCcccEEEcc
Confidence 35788999999987 566 58899999999999999996544 9999999999999999996 444333899999999
Q ss_pred CCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCCC---CccCCCC
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPPS---SFEGNSM 215 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~---~~~~n~~ 215 (632)
+|++++ +| .+..+++|+.|+|++|++++..+-..+++|+.|+|++|++++. ..+..++.. .+.+|..
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEE
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcc
Confidence 999996 44 6999999999999999999875334789999999999999865 444444433 3445543
No 342
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.51 E-value=4.9e-14 Score=156.51 Aligned_cols=139 Identities=22% Similarity=0.234 Sum_probs=110.9
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
.+++.|+|++|.+++ ++++.|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|..-.++|++|+|+
T Consensus 52 ~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISE-LRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCC-CCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSCCCTTCSEEECC
T ss_pred CCcCEEECCCCCccc-cChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCccccccCCEEECC
Confidence 367888999998884 55457888999999999999998877888889999999999999988 6666644789999999
Q ss_pred CCCCcc-cCCccccCCCCccceecccccccccCCCCCCCCC--cEEEcccCCC--CCCCcccccCCC
Q 006747 145 FNSITG-NIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRL--RHLNLSYNHL--NGSVPLALQKFP 206 (632)
Q Consensus 145 ~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L--~~l~ls~N~l--~g~~p~~~~~~~ 206 (632)
+|++++ .+|..|+++++|+.|+|++|++++. .-..+++| +.|+|++|++ ++..|..+..+.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccC-chhhhhhceeeEEEeecccccccccCcccccccC
Confidence 999887 4568889999999999999988762 22244555 8999999988 777787776654
No 343
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.49 E-value=4.7e-14 Score=156.00 Aligned_cols=117 Identities=26% Similarity=0.256 Sum_probs=91.3
Q ss_pred EEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEcc
Q 006747 67 VLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLS 144 (632)
Q Consensus 67 v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls 144 (632)
+..|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..|++|++|++|+|++|+|++ +| .+. ++|+.|+|+
T Consensus 443 L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 5568888888875 664 778888888888888888 778888888888888888888885 66 554 678888888
Q ss_pred CCCCcccC-CccccCCCCccceecccccccccCCCC-----CCCCCcEEEc
Q 006747 145 FNSITGNI-PASIRNLSHLVGLNLQNNSLTGFIPNF-----NLSRLRHLNL 189 (632)
Q Consensus 145 ~N~l~g~~-p~~~~~l~~L~~l~l~~N~l~~~~p~~-----~~~~L~~l~l 189 (632)
+|+|++.+ |..|+.+++|+.|+|++|.|++.+|.. .+++|+.||+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 88888766 888888888888888888888877753 3677887764
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.49 E-value=1.3e-14 Score=148.41 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=106.9
Q ss_pred eEEEEEeCCCCcccccCchhh-cCCCCCcEEeccCCccCCCCC----ccccCCCCCCeEeecCCcCCccCCCCcc--CCC
Q 006747 66 RVLAVRLPGVGLYGPIPANTL-EKLDSLMILSLRSNHLSGDLP----SNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQL 138 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l-~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L 138 (632)
++..|+|+++.+.+.+|...+ ..+++|+.|+|++|.+++..| ..+..+++|++|+|++|++++..|..+. ++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 377888888888888887322 788889999999999887655 3455788899999999998877777664 788
Q ss_pred cEEEccCCCCccc--C--CccccCCCCccceecccccccccCCC---C--CCCCCcEEEcccCCCCCCCcccccCC
Q 006747 139 NWVDLSFNSITGN--I--PASIRNLSHLVGLNLQNNSLTGFIPN---F--NLSRLRHLNLSYNHLNGSVPLALQKF 205 (632)
Q Consensus 139 ~~L~Ls~N~l~g~--~--p~~~~~l~~L~~l~l~~N~l~~~~p~---~--~~~~L~~l~ls~N~l~g~~p~~~~~~ 205 (632)
++|||++|++.+. + +..++.+++|+.|+|++|+++...+. . .+++|++|+|++|+|++.+|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 8999999988753 2 23347888899999999988754332 1 56889999999999988877766544
No 345
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.49 E-value=3.6e-14 Score=139.33 Aligned_cols=138 Identities=20% Similarity=0.220 Sum_probs=116.8
Q ss_pred CeEEEEEeCCCC-cccccCchhhcCCCCCcEEeccC-CccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCc-
Q 006747 65 SRVLAVRLPGVG-LYGPIPANTLEKLDSLMILSLRS-NHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLN- 139 (632)
Q Consensus 65 ~~v~~l~l~~~~-l~g~lp~~~l~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~- 139 (632)
.++..|+|++|. ++ .+++..|.++++|++|+|++ |++++..+..|.++++|++|+|++|++++ +|. +. ++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 468899999997 65 67777899999999999999 99997777889999999999999999996 776 43 6777
Q ss_pred --EEEccCC-CCcccCCccccCCCCcc-ceecccccccccCCC-CCCCCCcEEEcccCC-CCCCCcccccCC
Q 006747 140 --WVDLSFN-SITGNIPASIRNLSHLV-GLNLQNNSLTGFIPN-FNLSRLRHLNLSYNH-LNGSVPLALQKF 205 (632)
Q Consensus 140 --~L~Ls~N-~l~g~~p~~~~~l~~L~-~l~l~~N~l~~~~p~-~~~~~L~~l~ls~N~-l~g~~p~~~~~~ 205 (632)
+|+|++| ++++..+..|.++++|+ .|+|++|+++..++. +..++|+.|+|++|+ +++..+..+..+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l 203 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGV 203 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTC
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhcc
Confidence 9999999 99987777899999999 999999999965554 345789999999995 885545556555
No 346
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.49 E-value=4.9e-15 Score=168.94 Aligned_cols=138 Identities=27% Similarity=0.328 Sum_probs=118.2
Q ss_pred CCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEE
Q 006747 64 GSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWV 141 (632)
Q Consensus 64 ~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L 141 (632)
...+..|+|++|.+. .||.+ +..+++|+.|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..+. ++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISAN-IFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGG-GGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCChh-hcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 356889999999998 89884 568999999999999999 89999999999999999999999 8899887 799999
Q ss_pred EccCCCCcccCCccccCCCCccceecccccccccCCCC--CC-CCCcEEEcccCCCCCCCcccccCCC
Q 006747 142 DLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NL-SRLRHLNLSYNHLNGSVPLALQKFP 206 (632)
Q Consensus 142 ~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~-~~L~~l~ls~N~l~g~~p~~~~~~~ 206 (632)
+|++|.|+ .+|..|++|++|+.|+|++|.|++.+|.. .+ ..+..|+|++|.++|.+|..+..+.
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeE
Confidence 99999998 78999999999999999999999988863 11 1223578999999999998876554
No 347
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.49 E-value=1.6e-14 Score=148.30 Aligned_cols=144 Identities=18% Similarity=0.181 Sum_probs=86.7
Q ss_pred EEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc---CCCcEEEc
Q 006747 67 VLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS---PQLNWVDL 143 (632)
Q Consensus 67 v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~~L~~L~L 143 (632)
+..|++++|.+++..+ ..+++|+.|+|++|++++..|..+..+++|++|+|++|.+++..|..+. ++|++|+|
T Consensus 101 L~~L~l~~n~l~~~~~----~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 101 IETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp CCEEECCSSCCSEEEE----CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred cCEEECCCCccCCcCc----cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 3445555555553322 2356677777777777766666666777777777777777765555543 56777777
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCcccccCCCC---CCccCCCCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQKFPP---SSFEGNSMLC 217 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~~~~n~~~c 217 (632)
++|.+++. |. ...+++|+.|+|++|++++.++.+ .+++|+.|+|++|+|+ .+|..+..++. ..+.+|...|
T Consensus 177 ~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 177 QYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp TTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBH
T ss_pred CCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccC
Confidence 77777653 22 223667777777777777665554 5666777777777776 45555544333 3345555544
No 348
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.49 E-value=2.9e-14 Score=156.70 Aligned_cols=139 Identities=22% Similarity=0.231 Sum_probs=120.9
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
.+++.|+|+++.+++ ++++.|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|..-.++|++|+|+
T Consensus 21 ~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISE-LWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCHPTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCC-CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECCCCCCCSEEECC
T ss_pred ccccEEECCCCcccc-cChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCccccCCccEEecc
Confidence 478899999999985 44458999999999999999999888999999999999999999999 6776645899999999
Q ss_pred CCCCcc-cCCccccCCCCccceecccccccccCCCCCCCCC--cEEEcccCCC--CCCCcccccCCC
Q 006747 145 FNSITG-NIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRL--RHLNLSYNHL--NGSVPLALQKFP 206 (632)
Q Consensus 145 ~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L--~~l~ls~N~l--~g~~p~~~~~~~ 206 (632)
+|++++ .+|..|+++++|+.|+|++|++++. .-..+++| +.|++++|.+ ++.+|..+..+.
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG-GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred CCccccccchhhhccCCcceEEEecCcccchh-hccccccceeeEEEeecccccccccccccccccc
Confidence 999998 5889999999999999999999872 22256777 9999999999 888888877655
No 349
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.7e-13 Score=127.06 Aligned_cols=105 Identities=23% Similarity=0.239 Sum_probs=71.1
Q ss_pred EEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCC
Q 006747 69 AVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFN 146 (632)
Q Consensus 69 ~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N 146 (632)
.|++++++|+ .+|.. + .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|. ++|++|+|++|
T Consensus 13 ~l~~s~n~l~-~ip~~-~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTG-I--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCcc-C--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4556666666 46653 3 37788888888888877777788888888888888888744444332 56777777777
Q ss_pred CCcccCCccccCCCCccceecccccccccCC
Q 006747 147 SITGNIPASIRNLSHLVGLNLQNNSLTGFIP 177 (632)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p 177 (632)
+|++..+..|.++++|+.|+|++|.++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 7776555566666666666666666665433
No 350
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.47 E-value=1.6e-13 Score=145.06 Aligned_cols=108 Identities=20% Similarity=0.271 Sum_probs=91.9
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCc-c--CCCcEEE
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSL-S--PQLNWVD 142 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~--~~L~~L~ 142 (632)
++..|+|+++.+.+ +++..+..+++|+.|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+ . ++|++|+
T Consensus 70 ~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 70 QVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred cCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 57788999999874 55557899999999999999999888888899999999999999998 555543 3 7899999
Q ss_pred ccCCCCcccCCccccCCCCccceeccccccccc
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGF 175 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 175 (632)
|++|++++..|..|.++++|+.|+|++|++++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999988888899999999999999998864
No 351
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.46 E-value=1.5e-13 Score=128.27 Aligned_cols=113 Identities=23% Similarity=0.272 Sum_probs=99.1
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
..++.|+|+++.++ .+|+..+..+++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+..+. ++|+.|+
T Consensus 28 ~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 46889999999998 46666789999999999999999977777789999999999999999966665554 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN 178 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 178 (632)
|++|+|++..+..+..+++|+.|+|++|.+++..|.
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999999976666789999999999999999987663
No 352
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.45 E-value=4.8e-14 Score=144.73 Aligned_cols=133 Identities=22% Similarity=0.167 Sum_probs=105.5
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
..+..|+|++|.+++ ++ .+++|+.|+|++|.+++..+. .+++|++|+|++|++++..|..+. ++|++|+
T Consensus 80 ~~L~~L~Ls~n~l~~-l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 150 (317)
T 3o53_A 80 STLRTLDLNNNYVQE-LL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (317)
T ss_dssp TTCCEEECCSSEEEE-EE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEE
T ss_pred CCCCEEECcCCcccc-cc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEE
Confidence 467888999998873 33 348899999999999865443 367899999999999976666664 7899999
Q ss_pred ccCCCCcccCCccc-cCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCC
Q 006747 143 LSFNSITGNIPASI-RNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPP 207 (632)
Q Consensus 143 Ls~N~l~g~~p~~~-~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 207 (632)
|++|.+++..|..+ ..+++|+.|+|++|.+++..+...+++|+.|+|++|+|++ +|..+..++.
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~ 215 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAG 215 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGGTT
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc-chhhhcccCc
Confidence 99999998777777 4789999999999999988665678899999999999985 4544555443
No 353
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=3.7e-13 Score=125.31 Aligned_cols=106 Identities=23% Similarity=0.245 Sum_probs=79.3
Q ss_pred EEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccC
Q 006747 68 LAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSF 145 (632)
Q Consensus 68 ~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~ 145 (632)
..+++++++|. .+|.. + .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|. ++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~-~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAG-I--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCC-c--CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 45788888885 78773 3 37888999999999888888888899999998888888854443333 6778888888
Q ss_pred CCCcccCCccccCCCCccceecccccccccCC
Q 006747 146 NSITGNIPASIRNLSHLVGLNLQNNSLTGFIP 177 (632)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p 177 (632)
|+|++..+..|..+++|+.|+|++|.+....+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 88876555557777777777777777765543
No 354
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=2.6e-13 Score=125.83 Aligned_cols=105 Identities=25% Similarity=0.364 Sum_probs=93.6
Q ss_pred CcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceeccc
Q 006747 92 LMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQN 169 (632)
Q Consensus 92 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~ 169 (632)
.+.|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468999999999 5777663 8999999999999988788776 7999999999999987777889999999999999
Q ss_pred ccccccCCC-C-CCCCCcEEEcccCCCCCCCc
Q 006747 170 NSLTGFIPN-F-NLSRLRHLNLSYNHLNGSVP 199 (632)
Q Consensus 170 N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~p 199 (632)
|+|++.++. + .+++|+.|+|++|.|++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999998886 4 78999999999999997654
No 355
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.44 E-value=1.3e-13 Score=128.69 Aligned_cols=124 Identities=20% Similarity=0.224 Sum_probs=101.4
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCC-CCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCc-c--CCCcE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLD-SLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSL-S--PQLNW 140 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~--~~L~~ 140 (632)
..+..|+|++|+++ .+|. +..+. +|+.|+|++|.|++. ..+..+++|++|+|++|++++. |..+ . ++|++
T Consensus 19 ~~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRI-GEGLDQALPDLTE 92 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEE-CSCHHHHCTTCCE
T ss_pred CCceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccccc-CcchhhcCCCCCE
Confidence 35888999999998 5654 44444 999999999999965 6788999999999999999954 5433 3 78999
Q ss_pred EEccCCCCcccCCc--cccCCCCccceecccccccccCCC----C-CCCCCcEEEcccCCCC
Q 006747 141 VDLSFNSITGNIPA--SIRNLSHLVGLNLQNNSLTGFIPN----F-NLSRLRHLNLSYNHLN 195 (632)
Q Consensus 141 L~Ls~N~l~g~~p~--~~~~l~~L~~l~l~~N~l~~~~p~----~-~~~~L~~l~ls~N~l~ 195 (632)
|+|++|+|+ .+|. .+..+++|+.|+|++|.++..++. + .+++|+.||+++|.+.
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999996 5676 889999999999999999866543 2 7899999999999765
No 356
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=4.4e-13 Score=124.80 Aligned_cols=103 Identities=22% Similarity=0.353 Sum_probs=91.7
Q ss_pred cEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccc
Q 006747 93 MILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNN 170 (632)
Q Consensus 93 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N 170 (632)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 7787775 8999999999999988887775 79999999999999866667899999999999999
Q ss_pred cccccCCC-C-CCCCCcEEEcccCCCCCCC
Q 006747 171 SLTGFIPN-F-NLSRLRHLNLSYNHLNGSV 198 (632)
Q Consensus 171 ~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~ 198 (632)
+|++.++. + .+++|+.|+|++|.|....
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 99998876 4 7899999999999998543
No 357
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.44 E-value=7.1e-14 Score=153.96 Aligned_cols=133 Identities=22% Similarity=0.334 Sum_probs=101.9
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
.++..|+|++|.|++ ||. +.. +|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. ..++|+.|+|+
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~--l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls 168 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE--LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVR 168 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC--CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECC
T ss_pred CCCCEEEccCCCCCC-cch--hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECC
Confidence 467788999999987 876 544 89999999999987 666 68899999999999985 676 55789999999
Q ss_pred CCCCcccCCccccCCCCccceecccccccccCCCCCCCCC-------cEEEcccCCCCCCCcccccCCCCC---CccCCC
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRL-------RHLNLSYNHLNGSVPLALQKFPPS---SFEGNS 214 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L-------~~l~ls~N~l~g~~p~~~~~~~~~---~~~~n~ 214 (632)
+|+|++ +|. |. ++|+.|+|++|+|+..++ +. .+| +.|+|++|+|+ .+|..+.+++.. .+.+|.
T Consensus 169 ~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~-~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~ 241 (571)
T 3cvr_A 169 NNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VP-VRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNP 241 (571)
T ss_dssp SSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC---------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSS
T ss_pred CCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HH-HhhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCc
Confidence 999987 777 66 889999999999985544 42 266 88999999988 678776665543 345554
Q ss_pred C
Q 006747 215 M 215 (632)
Q Consensus 215 ~ 215 (632)
.
T Consensus 242 l 242 (571)
T 3cvr_A 242 L 242 (571)
T ss_dssp C
T ss_pred C
Confidence 4
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.44 E-value=3.5e-13 Score=136.46 Aligned_cols=131 Identities=31% Similarity=0.406 Sum_probs=96.6
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+|++|.+++ +++ +..+++|+.|+|++|.+++ +| .+..+++|++|+|++|++++. + .+. ++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~-~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-N-GLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-G-GGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-h-hhcCCCCCCEEE
Confidence 357788888888875 333 7788888888888888875 33 478888888888888888753 3 232 6788888
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFP 206 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~ 206 (632)
|++|++++. ..+..+++|+.|+|++|++++..+-..+++|+.|+|++|+|++ +|. +..++
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~~-l~~l~ 200 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LRA-LAGLK 200 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CGG-GTTCT
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Chh-hccCC
Confidence 888888864 5778888888888888888877664477888888888888874 442 44443
No 359
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.42 E-value=3.2e-13 Score=140.57 Aligned_cols=147 Identities=23% Similarity=0.268 Sum_probs=94.0
Q ss_pred CCCCCCcceEecCCC---------CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCc-cccCCCCCCe-
Q 006747 50 SVCTSWVGITCTKNG---------SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPS-NVLSLSSLRF- 118 (632)
Q Consensus 50 ~~c~~w~gv~c~~~~---------~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~- 118 (632)
+.| +|..|.|++++ ..++.|+|++|.|+ .||++.|.+|++|++|+|++|++.+.+|. .|.++++|++
T Consensus 7 C~C-~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 7 CHC-SNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEI 84 (350)
T ss_dssp SEE-ETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEE
T ss_pred cEe-eCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhh
Confidence 335 79999998632 25788999999998 78888899999999999999998766553 4566666553
Q ss_pred EeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCC-------------------------ccccCCC-Cccceecccc
Q 006747 119 LYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIP-------------------------ASIRNLS-HLVGLNLQNN 170 (632)
Q Consensus 119 L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p-------------------------~~~~~l~-~L~~l~l~~N 170 (632)
++++.|++++..|..|. ++|++|++++|+|++..+ ..|..+. .|+.|+|++|
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred hcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 44555666644444443 456666665555553222 1222232 4566777777
Q ss_pred cccccCCC-CCCCCCcEEEccc-CCCCCCCc
Q 006747 171 SLTGFIPN-FNLSRLRHLNLSY-NHLNGSVP 199 (632)
Q Consensus 171 ~l~~~~p~-~~~~~L~~l~ls~-N~l~g~~p 199 (632)
+|+...+. +...+|+.|++++ |.++ .+|
T Consensus 165 ~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~ 194 (350)
T 4ay9_X 165 GIQEIHNSAFNGTQLDELNLSDNNNLE-ELP 194 (350)
T ss_dssp CCCEECTTSSTTEEEEEEECTTCTTCC-CCC
T ss_pred cccCCChhhccccchhHHhhccCCccc-CCC
Confidence 77765544 2455666666654 3333 444
No 360
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.41 E-value=2.2e-13 Score=141.98 Aligned_cols=133 Identities=23% Similarity=0.250 Sum_probs=114.0
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCC--Ccc--CCCcE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS--SLS--PQLNW 140 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~--~~L~~ 140 (632)
.++..|+|++|.+++..| ..+.++++|++|+|++|++++..+..+.++++|++|+|++|+++ .+|. .+. ++|+.
T Consensus 76 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEE-DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCEEECCCCccCccCH-hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 468899999999996444 47999999999999999999655555899999999999999999 4555 443 79999
Q ss_pred EEccCC-CCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCcc
Q 006747 141 VDLSFN-SITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVPL 200 (632)
Q Consensus 141 L~Ls~N-~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p~ 200 (632)
|+|++| .+++..|..|+++++|+.|++++|++++..|.. .+++|++|++++|+++ .+|.
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~ 215 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLE 215 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHH
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchh
Confidence 999999 577777889999999999999999999987763 7889999999999986 4554
No 361
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.41 E-value=5.4e-13 Score=136.26 Aligned_cols=127 Identities=24% Similarity=0.336 Sum_probs=93.8
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
.++..|+|+++.+.+ +++ +..+++|+.|+|++|.+++. +.+..+++|++|+|++|++++..+-.-.++|+.|+|+
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~ 137 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLD 137 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECC
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCchhhcCCCCCCEEECC
Confidence 357788888888874 443 77888888888888888753 3688888888888888888753221112678888888
Q ss_pred CCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCC
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSV 198 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~ 198 (632)
+|++++..+ ++.+++|+.|+|++|++++..+-..+++|+.|+|++|++++..
T Consensus 138 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~ 189 (308)
T 1h6u_A 138 LNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDIS 189 (308)
T ss_dssp SSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG
T ss_pred CCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcCh
Confidence 888876433 7788888888888888887665346778888888888887543
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.41 E-value=5.9e-13 Score=134.80 Aligned_cols=130 Identities=25% Similarity=0.389 Sum_probs=110.1
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
++..|+++++++. .++ .+..+++|+.|+|++|++++..+ +.++++|++|+|++|++++ +|. +. ++|+.|+|
T Consensus 47 ~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L 119 (291)
T 1h6t_A 47 SIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSL 119 (291)
T ss_dssp TCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEEC
T ss_pred cccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEEC
Confidence 5788999999987 455 48899999999999999996544 9999999999999999996 333 43 79999999
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCcccccCCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQKFPP 207 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 207 (632)
++|++++. ..+..+++|+.|+|++|++++. +.+ .+++|+.|+|++|++++..| +..++.
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~ 179 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTK 179 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTT
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCc
Confidence 99999963 5789999999999999999987 443 88999999999999997555 555543
No 363
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.41 E-value=6.8e-13 Score=135.52 Aligned_cols=122 Identities=22% Similarity=0.360 Sum_probs=77.6
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
+++.|++.++++. .+| .+..+++|+.|+|++|.+++. +. +..+++|++|+|++|++++ +| .+. ++|+.|+|
T Consensus 42 ~L~~L~l~~~~i~-~l~--~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 42 GITTLSAFGTGVT-TIE--GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp TCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CcCEEEeeCCCcc-Cch--hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 4566666766665 344 366677777777777777643 33 6677777777777777664 23 232 56777777
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g 196 (632)
++|++++ +|. +..+++|+.|+|++|++++..+-..+++|+.|+|++|++++
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCC
Confidence 7777765 332 66677777777777777665553356677777777777664
No 364
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.40 E-value=1.1e-15 Score=145.66 Aligned_cols=130 Identities=28% Similarity=0.345 Sum_probs=109.3
Q ss_pred eEEEEEeCCCCcccccCc-----hhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCC
Q 006747 66 RVLAVRLPGVGLYGPIPA-----NTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQL 138 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~-----~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L 138 (632)
+++.+++..+.++|.+|. ..+..+++|+.|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+. ++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455556666666666653 268899999999999999996 77 8999999999999999999 6777654 789
Q ss_pred cEEEccCCCCcccCCccccCCCCccceecccccccccCC--C-CCCCCCcEEEcccCCCCCCCcc
Q 006747 139 NWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIP--N-FNLSRLRHLNLSYNHLNGSVPL 200 (632)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p--~-~~~~~L~~l~ls~N~l~g~~p~ 200 (632)
++|+|++|++++ +| .+..+++|+.|+|++|++++..+ . ..+++|+.|++++|.+++.+|.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999999997 55 68999999999999999997544 2 3789999999999999877665
No 365
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.40 E-value=1.2e-13 Score=148.95 Aligned_cols=101 Identities=23% Similarity=0.230 Sum_probs=51.7
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCC-------------CeEeecCCcCCccCC
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSL-------------RFLYLQNNNFSGNIP 131 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------~~L~Ls~N~l~g~~p 131 (632)
.++..++++++++ |.||+ .+++|++|++|+|++|.+.|.+|..++++++| ++|++++|.+++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 4677888999998 89987 68999999999999999998899888887754 777777777774 34
Q ss_pred CCccCCCcEEEccCCCCcccCCccccCCCCccceeccccccc
Q 006747 132 SSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLT 173 (632)
Q Consensus 132 ~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 173 (632)
. +.++|+.|+|++|++++ +|..+ ++|+.|++++|+++
T Consensus 88 ~-~~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~ 124 (454)
T 1jl5_A 88 E-LPPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLK 124 (454)
T ss_dssp S-CCTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS
T ss_pred C-CcCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccC
Confidence 3 33566666666666665 55432 34444444444444
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.39 E-value=8.7e-13 Score=146.78 Aligned_cols=132 Identities=32% Similarity=0.429 Sum_probs=109.1
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
..+..|+|++|.+.+ +++ +..|++|+.|+|++|.|++ +| .+..|++|++|+|++|+|++ ++ .+. ++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCC-Chh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEE
Confidence 468899999999986 443 8899999999999999985 34 78999999999999999985 33 233 7899999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPP 207 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 207 (632)
|++|+|++. ..+..|++|+.|+|++|+|++.+|-..+++|+.|+|++|+|++ +| .+..++.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~ 198 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKN 198 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTT
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC-Ch-HHccCCC
Confidence 999999974 6789999999999999999998885588999999999999985 34 4554443
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.38 E-value=5.8e-13 Score=147.26 Aligned_cols=104 Identities=27% Similarity=0.290 Sum_probs=85.6
Q ss_pred CCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecc
Q 006747 91 SLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQ 168 (632)
Q Consensus 91 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~ 168 (632)
.|+.|+|++|+|++ +|. |+++++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +| .++++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46788888888885 665 888888999999998888 7787776 788889999998886 67 78888889999999
Q ss_pred cccccccC-CC-C-CCCCCcEEEcccCCCCCCCc
Q 006747 169 NNSLTGFI-PN-F-NLSRLRHLNLSYNHLNGSVP 199 (632)
Q Consensus 169 ~N~l~~~~-p~-~-~~~~L~~l~ls~N~l~g~~p 199 (632)
+|+|++.+ |. + .+++|+.|+|++|+|++.+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99888885 54 3 78888899999988886554
No 368
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.37 E-value=1.3e-12 Score=140.89 Aligned_cols=123 Identities=21% Similarity=0.160 Sum_probs=80.9
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEccC
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLSF 145 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~ 145 (632)
.+..+++.+|...|.++ +..+++|+.|+|++|++++ +| +..+++|+.|+|++|++++. +-.-.++|+.|+|++
T Consensus 149 ~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~ 221 (457)
T 3bz5_A 149 QLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSS 221 (457)
T ss_dssp TCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCS
T ss_pred cCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcC
Confidence 46677777776666663 5677777888888887775 44 67777777777777777753 322236777777777
Q ss_pred CCCcccCCccccCCCCccceecccccccccCCCCCCC----------CCcEEEcccCCCCCCCc
Q 006747 146 NSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLS----------RLRHLNLSYNHLNGSVP 199 (632)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~----------~L~~l~ls~N~l~g~~p 199 (632)
|+|++ +| ++.+++|+.|+|++|++++.++. .++ +|+.|++++|.+.|.+|
T Consensus 222 N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~-~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 222 NKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS-TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT-TCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred Ccccc-cC--ccccCCCCEEEeeCCcCCCcCHH-HCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 77776 55 67777777777777777775432 222 34445555555555555
No 369
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.4e-12 Score=135.51 Aligned_cols=108 Identities=25% Similarity=0.339 Sum_probs=77.5
Q ss_pred CCCCCcceEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccC-CccCCCCCccccCCCCCCeEeecCCcCCcc
Q 006747 51 VCTSWVGITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRS-NHLSGDLPSNVLSLSSLRFLYLQNNNFSGN 129 (632)
Q Consensus 51 ~c~~w~gv~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 129 (632)
.| .|.+|.|+++ |+|+ .||. +..+++|+.|+|++ |.|++..|..|.+|++|++|+|++|+|++.
T Consensus 7 ~C-~~~~v~~~~~-----------n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 71 (347)
T 2ifg_A 7 PH-GSSGLRCTRD-----------GALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71 (347)
T ss_dssp CS-SSSCEECCSS-----------CCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEE
T ss_pred cc-cCCEEEcCCC-----------CCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCcccee
Confidence 35 6777777542 1455 4776 88888999999986 899877778888898888888888888876
Q ss_pred CCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccc
Q 006747 130 IPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTG 174 (632)
Q Consensus 130 ~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 174 (632)
.|..|. ++|+.|||++|+|++..+..|..++ |+.|+|++|.|..
T Consensus 72 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 666554 5677777777777754444555444 6677777666653
No 370
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.36 E-value=1.1e-12 Score=142.09 Aligned_cols=134 Identities=25% Similarity=0.358 Sum_probs=110.5
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
.++..|+++++.+.+..+ +..+++|+.|+|++|.+++..+ +..+++|++|+|++|++++..|-.-.++|+.|+|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 317 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECC
T ss_pred CCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECc
Confidence 367889999999986543 7889999999999999996544 88999999999999999976553334889999999
Q ss_pred CCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCC
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPP 207 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 207 (632)
+|++++..| +..+++|+.|++++|.+++...-..+++|+.|++++|++++.+| +..++.
T Consensus 318 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 376 (466)
T 1o6v_A 318 FNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTR 376 (466)
T ss_dssp SSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGG--GTTCTT
T ss_pred CCcCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccch--hhcCCC
Confidence 999998766 78999999999999999987433488999999999999998777 555444
No 371
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.36 E-value=1.5e-12 Score=141.02 Aligned_cols=134 Identities=28% Similarity=0.320 Sum_probs=113.7
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
.++..|+|+++.+.+ ++ .+..+++|+.|+|++|.+++..| +..+++|++|+|++|.+++..|-.-.++|+.|+|+
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELN 295 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcC
Confidence 468899999999985 43 58899999999999999997655 89999999999999999976553333899999999
Q ss_pred CCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCC
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPP 207 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 207 (632)
+|++++..| ++.+++|+.|+|++|++++..|...+++|+.|++++|++++. ..+..++.
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~ 354 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTN 354 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCC
Confidence 999997554 899999999999999999988856899999999999999975 34555444
No 372
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.35 E-value=6.7e-13 Score=147.95 Aligned_cols=140 Identities=26% Similarity=0.365 Sum_probs=96.5
Q ss_pred CCCCCCCCCCCCcce--------EecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCC
Q 006747 44 NWNSSTSVCTSWVGI--------TCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSS 115 (632)
Q Consensus 44 ~w~~~~~~c~~w~gv--------~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 115 (632)
.|....++| .|.|. .|.. ..++.|++++++|+ .+|.. +. ++|+.|+|++|+|+ .+|. .+++
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~--~~l~~L~ls~n~L~-~lp~~-l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLN--NGNAVLNVGESGLT-TLPDC-LP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHH--HCCCEEECCSSCCS-CCCSC-CC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHhcCCcc-hhccccccCcccccccC--CCCcEEEecCCCcC-ccChh-hC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 576555555 78654 3322 34778888888888 77763 33 78888888888888 4565 5788
Q ss_pred CCeEeecCCcCCccCCCCccCCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCC
Q 006747 116 LRFLYLQNNNFSGNIPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLN 195 (632)
Q Consensus 116 L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~ 195 (632)
|++|+|++|+|+ .+|. ..++|++|+|++|+|++ +|. .+++|+.|+|++|++++.++. +++|++|+|++|+|+
T Consensus 83 L~~L~Ls~N~l~-~lp~-~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~--l~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV-LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPVL--PPGLQELSVSDNQLA 154 (622)
T ss_dssp CCEEEECSCCCS-CCCC-CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCS
T ss_pred CCEEEcCCCcCC-cCCC-CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCCC--CCCCCEEECcCCcCC
Confidence 888888888887 5666 44778888888888875 454 556777777777777764432 367777777777776
Q ss_pred CCCccccc
Q 006747 196 GSVPLALQ 203 (632)
Q Consensus 196 g~~p~~~~ 203 (632)
+ +|..+.
T Consensus 155 ~-l~~~~~ 161 (622)
T 3g06_A 155 S-LPALPS 161 (622)
T ss_dssp C-CCCCCT
T ss_pred C-cCCccC
Confidence 4 343333
No 373
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.35 E-value=1.7e-12 Score=144.40 Aligned_cols=131 Identities=25% Similarity=0.408 Sum_probs=110.7
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+|+++.+. .+| .+..|++|+.|+|++|+|++..| +..|++|++|+|++|+|++ +| .+. ++|+.|+
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 35777888888887 455 48999999999999999997554 9999999999999999995 44 343 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCcccccCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVPLALQKFPP 207 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 207 (632)
|++|+|++ + ..+..|++|+.|+|++|+|++. +.+ .+++|+.|+|++|.|++..| +..++.
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~ 176 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTK 176 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTT
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCC
Confidence 99999996 3 4699999999999999999987 443 89999999999999998766 555544
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.35 E-value=2e-12 Score=128.92 Aligned_cols=123 Identities=23% Similarity=0.264 Sum_probs=104.4
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
..+..|+|++|.+++ +++ +..+++|+.|+|++|++++ +|.. .. ++|++|+|++|++++. + .+. ++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEE
Confidence 468999999999985 544 8999999999999999996 4543 33 9999999999999963 3 343 7999999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGS 197 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~ 197 (632)
|++|+|++. | .+..+++|+.|+|++|++++...-..+++|+.|++++|++++.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999999974 4 7999999999999999999882223889999999999999865
No 375
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.35 E-value=1.1e-12 Score=122.21 Aligned_cols=119 Identities=18% Similarity=0.124 Sum_probs=96.6
Q ss_pred hhcCCCCCcEEeccCCccCCCCCccccCCC-CCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCC
Q 006747 85 TLEKLDSLMILSLRSNHLSGDLPSNVLSLS-SLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSH 161 (632)
Q Consensus 85 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~ 161 (632)
.+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|.+++. ..+. ++|++|+|++|+|++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4677899999999999999 4554 55554 999999999999975 3444 79999999999999765566699999
Q ss_pred ccceecccccccccCC--CC-CCCCCcEEEcccCCCCCCCccc----ccCCCCC
Q 006747 162 LVGLNLQNNSLTGFIP--NF-NLSRLRHLNLSYNHLNGSVPLA----LQKFPPS 208 (632)
Q Consensus 162 L~~l~l~~N~l~~~~p--~~-~~~~L~~l~ls~N~l~g~~p~~----~~~~~~~ 208 (632)
|+.|+|++|+++..++ .+ .+++|+.|++++|.++ .+|.. +..++..
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L 142 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQV 142 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTC
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcc
Confidence 9999999999976544 33 7899999999999998 55653 5555544
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.32 E-value=1.5e-12 Score=135.22 Aligned_cols=141 Identities=24% Similarity=0.311 Sum_probs=110.9
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
..+..+++.++.+.+..+ +..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++. + .+. ++|+.|+
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~ 271 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP---VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-N-AVKDLTKLKMLN 271 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEE
T ss_pred CccceeecccCCCCCCch---hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-h-hHhcCCCcCEEE
Confidence 457788999998885432 7889999999999999985433 88999999999999999853 3 232 7899999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEcccCCCCCCCc-ccccCCCCCCccCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSYNHLNGSVP-LALQKFPPSSFEGNS 214 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~N~l~g~~p-~~~~~~~~~~~~~n~ 214 (632)
|++|++++. ..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..| ..+.++....+.+|.
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhc
Confidence 999999864 46889999999999999999887763 78999999999999997766 223333344455553
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.32 E-value=2.7e-12 Score=133.20 Aligned_cols=144 Identities=24% Similarity=0.326 Sum_probs=117.9
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
..+..++++++.+.+ ++. +..+++|+.|++++|.+.+..+ +..+++|++|+|++|++++..+-.-.++|+.|+|+
T Consensus 177 ~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 177 TDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIG 251 (347)
T ss_dssp TTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECC
T ss_pred CCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECC
Confidence 467889999999874 443 7899999999999999996544 88999999999999999965442223899999999
Q ss_pred CCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCcccccCCCCC---CccCCCC
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVPLALQKFPPS---SFEGNSM 215 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~---~~~~n~~ 215 (632)
+|.+++ + ..+..+++|+.|++++|++++...-..+++|+.|++++|++++..|..+..++.. .+.+|..
T Consensus 252 ~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 252 TNQISD-I-NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp SSCCCC-C-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSC
T ss_pred CCccCC-C-hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcc
Confidence 999996 3 5789999999999999999986322378999999999999998888777766544 4456654
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.31 E-value=9.6e-12 Score=134.02 Aligned_cols=117 Identities=26% Similarity=0.348 Sum_probs=74.2
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.++..|+|++|.+++ +| .++++++|++|+|++|++++ +|..+ .+|++|+|++|++++ +| .+. ++|+.|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 368889999999986 87 38899999999999999885 55433 466777777777664 44 232 4566666
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCCC-CCCCCcEEEcccCCCC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLN 195 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~ 195 (632)
+++|++++ +|... ++|+.|++++|+++. +|.+ .+++|+.|++++|+++
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILEE-LPELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCS
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCCc-ccccCCCCCCCEEECCCCcCC
Confidence 66666654 33322 355555555555552 2333 4555555555555555
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.31 E-value=9.8e-12 Score=134.06 Aligned_cols=123 Identities=22% Similarity=0.172 Sum_probs=91.5
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEcc
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLS 144 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls 144 (632)
.++..|+|++|.+++ +| ++.+++|+.|+|++|+|++. + ++.+++|++|+|++|++.+.++-.-.++|+.|+|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls 178 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCS 178 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECC
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECC
Confidence 367888999999886 54 78889999999999999873 3 77888888888888866666644334678888888
Q ss_pred CCCCcccCCccccCCCCccceecccccccccCCCCCCCCCcEEEcccCCCCCCCc
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNFNLSRLRHLNLSYNHLNGSVP 199 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~L~~l~ls~N~l~g~~p 199 (632)
+|++++ +| ++.+++|+.|++++|++++. +-..+++|+.|+|++|+|++ +|
T Consensus 179 ~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 179 FNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp SSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC
T ss_pred CCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC
Confidence 888876 44 67777777777777777765 33366777777777777776 44
No 380
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=6.5e-12 Score=130.43 Aligned_cols=102 Identities=23% Similarity=0.180 Sum_probs=90.3
Q ss_pred EEeccCC-ccCCCCCccccCCCCCCeEeecC-CcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceeccc
Q 006747 94 ILSLRSN-HLSGDLPSNVLSLSSLRFLYLQN-NNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQN 169 (632)
Q Consensus 94 ~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~ 169 (632)
.+++++| +|+ .+|. |..+++|++|+|++ |+|++..|..|. ++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 5789998 898 5788 99999999999996 999977777775 7999999999999999999999999999999999
Q ss_pred ccccccCCCC-CCCCCcEEEcccCCCCCC
Q 006747 170 NSLTGFIPNF-NLSRLRHLNLSYNHLNGS 197 (632)
Q Consensus 170 N~l~~~~p~~-~~~~L~~l~ls~N~l~g~ 197 (632)
|+|++.++.. ....|+.|+|++|.|...
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCC
Confidence 9999887763 434499999999999854
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.24 E-value=3.6e-13 Score=139.15 Aligned_cols=125 Identities=22% Similarity=0.186 Sum_probs=65.8
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCC-CCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEE
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGD-LPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVD 142 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~ 142 (632)
.+..+++.++.+.+.++. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..+. ++|+.|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 455566666666555443 34556666666666665543 555555566666666666655544444333 4555555
Q ss_pred ccCC-CCccc-CCccccCCCCccceecccc-ccccc-CCCC--CCC-CCcEEEcccC
Q 006747 143 LSFN-SITGN-IPASIRNLSHLVGLNLQNN-SLTGF-IPNF--NLS-RLRHLNLSYN 192 (632)
Q Consensus 143 Ls~N-~l~g~-~p~~~~~l~~L~~l~l~~N-~l~~~-~p~~--~~~-~L~~l~ls~N 192 (632)
|++| .+++. +|..+.++++|+.|+|++| .+++. ++.. .++ +|++|+|++|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 5555 45542 4444555555555555555 55432 1221 344 5555555555
No 382
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.21 E-value=6.5e-13 Score=140.22 Aligned_cols=143 Identities=20% Similarity=0.332 Sum_probs=97.8
Q ss_pred CeEEEEEeCCC---CcccccCchh------hcCCCCCcEEeccCCccCC----CCCccccCCCCCCeEeecCCcCCccCC
Q 006747 65 SRVLAVRLPGV---GLYGPIPANT------LEKLDSLMILSLRSNHLSG----DLPSNVLSLSSLRFLYLQNNNFSGNIP 131 (632)
Q Consensus 65 ~~v~~l~l~~~---~l~g~lp~~~------l~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p 131 (632)
.++..|+|+++ .++|.+|... +..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 35677777774 4556666532 3677888888888888876 467777788888888888888764433
Q ss_pred CCcc---------------CCCcEEEccCCCCc-ccCC---ccccCCCCccceeccccccc--c---cCC-CC-CCCCCc
Q 006747 132 SSLS---------------PQLNWVDLSFNSIT-GNIP---ASIRNLSHLVGLNLQNNSLT--G---FIP-NF-NLSRLR 185 (632)
Q Consensus 132 ~~~~---------------~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~~l~l~~N~l~--~---~~p-~~-~~~~L~ 185 (632)
..+. ++|+.|+|++|+++ +.+| ..+..+++|+.|+|++|+++ | ..| .+ .+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 3332 57888888888887 4455 46667788888888888877 3 334 33 667888
Q ss_pred EEEcccCCCC----CCCcccccCCCC
Q 006747 186 HLNLSYNHLN----GSVPLALQKFPP 207 (632)
Q Consensus 186 ~l~ls~N~l~----g~~p~~~~~~~~ 207 (632)
.|+|++|.|+ +.+|..+..++.
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCC
Confidence 8888888875 456655554443
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.20 E-value=1.1e-12 Score=138.33 Aligned_cols=150 Identities=21% Similarity=0.299 Sum_probs=117.4
Q ss_pred CeEEEEEeCCCCcccc----cCchhhcCC---------CCCcEEeccCCccC-CCCC---ccccCCCCCCeEeecCCcCC
Q 006747 65 SRVLAVRLPGVGLYGP----IPANTLEKL---------DSLMILSLRSNHLS-GDLP---SNVLSLSSLRFLYLQNNNFS 127 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~----lp~~~l~~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~ 127 (632)
.++..|+|++|.+.+. ++. .+..+ ++|++|+|++|+++ +.+| ..+..+++|++|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIAR-ALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHH-HHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCEEECcCCCCCHHHHHHHHH-HHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 4688999999999633 333 46566 89999999999998 4555 46778999999999999998
Q ss_pred --c---cCCCCcc--CCCcEEEccCCCCc----ccCCccccCCCCccceeccccccccc----CCC----CCCCCCcEEE
Q 006747 128 --G---NIPSSLS--PQLNWVDLSFNSIT----GNIPASIRNLSHLVGLNLQNNSLTGF----IPN----FNLSRLRHLN 188 (632)
Q Consensus 128 --g---~~p~~~~--~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~l~l~~N~l~~~----~p~----~~~~~L~~l~ 188 (632)
| .+|..+. ++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ++. ..+++|+.|+
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 3 3443454 78999999999997 67899999999999999999999876 333 2489999999
Q ss_pred cccCCCCC----CCcccc-c---CCCCCCccCCCC
Q 006747 189 LSYNHLNG----SVPLAL-Q---KFPPSSFEGNSM 215 (632)
Q Consensus 189 ls~N~l~g----~~p~~~-~---~~~~~~~~~n~~ 215 (632)
|++|.|++ .+|..+ . ++....+.+|..
T Consensus 281 L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 281 LQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp CCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred CcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 99999997 477765 3 333444555543
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.20 E-value=5.6e-13 Score=137.67 Aligned_cols=138 Identities=24% Similarity=0.278 Sum_probs=63.1
Q ss_pred eEEEEEeCCCCcccc-cCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCC-cCCcc-CCCCcc--CCCcE
Q 006747 66 RVLAVRLPGVGLYGP-IPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNN-NFSGN-IPSSLS--PQLNW 140 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~-lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~--~~L~~ 140 (632)
++..|+|+++.+++. +|. .+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++. +|..+. ++|+.
T Consensus 94 ~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 94 RVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp CCCEEECTTCEECHHHHHH-HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCEEEccCCCcCHHHHHH-HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 344455555554433 333 3445555555555555555444444555555555555555 34431 222221 44555
Q ss_pred EEccCC-CCccc-CCccccCCC-Cccceecccc--ccc-ccCCCC--CCCCCcEEEcccCC-CCCCCcccccC
Q 006747 141 VDLSFN-SITGN-IPASIRNLS-HLVGLNLQNN--SLT-GFIPNF--NLSRLRHLNLSYNH-LNGSVPLALQK 204 (632)
Q Consensus 141 L~Ls~N-~l~g~-~p~~~~~l~-~L~~l~l~~N--~l~-~~~p~~--~~~~L~~l~ls~N~-l~g~~p~~~~~ 204 (632)
|+|++| .+++. ++..+..++ +|+.|+|++| .++ +.+|.. .+++|+.|+|++|. +++..+..+.+
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~ 245 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 245 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGG
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhC
Confidence 555555 55432 344445555 5555555555 222 112221 34455555555554 44344434333
No 385
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19 E-value=9.5e-11 Score=116.49 Aligned_cols=134 Identities=16% Similarity=0.080 Sum_probs=105.9
Q ss_pred HhCccceeEEEEEEEcCCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHhh
Q 006747 343 VLGKGSYGTTYKAILEEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSA 421 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~ 421 (632)
.++.|+.+.||++... +..+++|+..... .....+.+|.+++..+.+|..+.++++++...+..|+||||++|.+|.+
T Consensus 21 ~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 99 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE 99 (263)
T ss_dssp CCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred eccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhh
Confidence 4677888999998754 6899999987532 2234688999999999667788899999998889999999999999987
Q ss_pred hhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc--------------------------------------------
Q 006747 422 LLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV-------------------------------------------- 457 (632)
Q Consensus 422 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------------- 457 (632)
..... .....++.+++++++.||+..
T Consensus 100 ~~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (263)
T 3tm0_A 100 EYEDE----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRE 169 (263)
T ss_dssp HCCTT----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHH
T ss_pred ccCCc----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHH
Confidence 64211 123467888999999999810
Q ss_pred ------------CCCceecCCCCCCeeecCCCCeEEcccCCC
Q 006747 458 ------------GGKFILGNIKSSNVLLSQDLQGCISDFGLT 487 (632)
Q Consensus 458 ------------~~~ivHrDlk~~NILl~~~~~~ki~DfGla 487 (632)
.+.++|+|+++.||+++++..+.|+||+.+
T Consensus 170 l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 170 LYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp HHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred HHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 135899999999999988766789999875
No 386
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.19 E-value=8.2e-11 Score=131.11 Aligned_cols=125 Identities=24% Similarity=0.306 Sum_probs=82.4
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCccCCCcEEEccC
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLSPQLNWVDLSF 145 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~L~~L~Ls~ 145 (632)
++..|+|++|.++ .||. .+++|+.|+|++|+|+ .+|. .+++|++|+|++|++++ +|. ..++|+.|+|++
T Consensus 62 ~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~-~l~~L~~L~L~~ 130 (622)
T 3g06_A 62 HITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA-LPSGLCKLWIFG 130 (622)
T ss_dssp TCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC-CCTTCCEEECCS
T ss_pred CCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC-CCCCcCEEECCC
Confidence 5778888888887 5765 4678888888888887 4555 67788888888888874 454 446777777777
Q ss_pred CCCcccCCccccCCCCccceecccccccccCCC------------------CCCCCCcEEEcccCCCCCCCcccccCCC
Q 006747 146 NSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN------------------FNLSRLRHLNLSYNHLNGSVPLALQKFP 206 (632)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~------------------~~~~~L~~l~ls~N~l~g~~p~~~~~~~ 206 (632)
|+|++ +|.. +++|+.|+|++|++++.++. ..+++|+.|+|++|+|++ +|..+.++.
T Consensus 131 N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~ 204 (622)
T 3g06_A 131 NQLTS-LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELY 204 (622)
T ss_dssp SCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCC
T ss_pred CCCCc-CCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhh
Confidence 77774 5543 36677777777777654321 122566666666666663 444333333
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.17 E-value=4.8e-12 Score=132.33 Aligned_cols=133 Identities=21% Similarity=0.253 Sum_probs=71.8
Q ss_pred EEEEEeCCCCcccccCc---hhhcCCC-CCcEEeccCCccCCCCCccccCC-----CCCCeEeecCCcCCccCCCCcc--
Q 006747 67 VLAVRLPGVGLYGPIPA---NTLEKLD-SLMILSLRSNHLSGDLPSNVLSL-----SSLRFLYLQNNNFSGNIPSSLS-- 135 (632)
Q Consensus 67 v~~l~l~~~~l~g~lp~---~~l~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~-- 135 (632)
++.|+|++|.+++.-+. +.+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 56666666666532220 3455565 66666666666665555555443 6666666666666644443221
Q ss_pred -----CCCcEEEccCCCCcccCCcccc----C-CCCccceecccccccccCCCC------CC-CCCcEEEcccCCCCCCC
Q 006747 136 -----PQLNWVDLSFNSITGNIPASIR----N-LSHLVGLNLQNNSLTGFIPNF------NL-SRLRHLNLSYNHLNGSV 198 (632)
Q Consensus 136 -----~~L~~L~Ls~N~l~g~~p~~~~----~-l~~L~~l~l~~N~l~~~~p~~------~~-~~L~~l~ls~N~l~g~~ 198 (632)
++|+.|+|++|+|++..+..+. . .++|+.|+|++|.++...... .+ ++|++|+|++|++++..
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 3566666666666654444332 2 246666666666665432210 22 26666666666665444
Q ss_pred c
Q 006747 199 P 199 (632)
Q Consensus 199 p 199 (632)
+
T Consensus 184 ~ 184 (362)
T 3goz_A 184 C 184 (362)
T ss_dssp H
T ss_pred H
Confidence 4
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.15 E-value=6.1e-12 Score=131.53 Aligned_cols=126 Identities=18% Similarity=0.114 Sum_probs=66.8
Q ss_pred EEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCC----ccccCCC-CCCeEeecCCcCCccCCCCcc-------CC
Q 006747 70 VRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLP----SNVLSLS-SLRFLYLQNNNFSGNIPSSLS-------PQ 137 (632)
Q Consensus 70 l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~-------~~ 137 (632)
.+|+.++++|.+|. .+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..+. ++
T Consensus 3 ~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 34555556655554 44444446666666666654444 4455555 566666666666544443331 45
Q ss_pred CcEEEccCCCCcccCCccccC----C-CCccceecccccccccCCCC------C-CCCCcEEEcccCCCCC
Q 006747 138 LNWVDLSFNSITGNIPASIRN----L-SHLVGLNLQNNSLTGFIPNF------N-LSRLRHLNLSYNHLNG 196 (632)
Q Consensus 138 L~~L~Ls~N~l~g~~p~~~~~----l-~~L~~l~l~~N~l~~~~p~~------~-~~~L~~l~ls~N~l~g 196 (632)
|+.|+|++|++++..+..+.. + ++|+.|+|++|++++..+.. . .++|++|+|++|.|++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 666666666665544443322 2 56666666666665543321 1 2456666666666553
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.12 E-value=1.2e-10 Score=120.98 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=102.2
Q ss_pred eEecCCCCeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--
Q 006747 58 ITCTKNGSRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS-- 135 (632)
Q Consensus 58 v~c~~~~~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-- 135 (632)
.+|+. + .++.++++|+ .||.+ + .++++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+|...+
T Consensus 7 C~C~~---~--~v~C~~~~Lt-~iP~~-l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~ 77 (350)
T 4ay9_X 7 CHCSN---R--VFLCQESKVT-EIPSD-L--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSN 77 (350)
T ss_dssp SEEET---T--EEEEESTTCC-SCCTT-C--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCS
T ss_pred cEeeC---C--EEEecCCCCC-ccCcC-c--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhc
Confidence 46764 2 3678899998 78874 3 46899999999999955556799999999999999999888886543
Q ss_pred -CCC-cEEEccCCCCcccCCccccCCCCccceecccccccccCCCC--CCCCCcEEEccc-CCCC
Q 006747 136 -PQL-NWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPNF--NLSRLRHLNLSY-NHLN 195 (632)
Q Consensus 136 -~~L-~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~L~~l~ls~-N~l~ 195 (632)
+++ +.+++++|+|++..|..|..+++|+.|++++|++++.++.. ...++..|++++ |++.
T Consensus 78 L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~ 142 (350)
T 4ay9_X 78 LPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH 142 (350)
T ss_dssp CTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC
T ss_pred chhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc
Confidence 344 46888899999888999999999999999999999876653 445566777755 4454
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.10 E-value=8.4e-13 Score=125.62 Aligned_cols=118 Identities=25% Similarity=0.273 Sum_probs=100.2
Q ss_pred hcCCCCCcEEeccCCccCCCCCc------cccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCcccc
Q 006747 86 LEKLDSLMILSLRSNHLSGDLPS------NVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIR 157 (632)
Q Consensus 86 l~~l~~L~~L~Ls~N~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~ 157 (632)
+.....++.++|+.|.++|.+|. .+..+++|++|+|++|++++ +| .+. ++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 56678889999999999999887 89999999999999999996 77 555 89999999999999 6898889
Q ss_pred CCCCccceecccccccccCCCC-CCCCCcEEEcccCCCCCCCc-ccccCCCC
Q 006747 158 NLSHLVGLNLQNNSLTGFIPNF-NLSRLRHLNLSYNHLNGSVP-LALQKFPP 207 (632)
Q Consensus 158 ~l~~L~~l~l~~N~l~~~~p~~-~~~~L~~l~ls~N~l~g~~p-~~~~~~~~ 207 (632)
.+++|+.|+|++|++++.+ .+ .+++|+.|+|++|++++..+ ..+..++.
T Consensus 91 ~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~ 141 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDK 141 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTT
T ss_pred cCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCC
Confidence 9999999999999999854 43 67899999999999985322 24444443
No 391
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.10 E-value=2.8e-10 Score=112.69 Aligned_cols=129 Identities=10% Similarity=0.030 Sum_probs=96.2
Q ss_pred CccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCC-ccceeEEEEeCCceEEEEecccCCCHhhhh
Q 006747 345 GKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPN-VVPIRAYYFSKDEKLLVYDFIEAGSFSALL 423 (632)
Q Consensus 345 g~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n-iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l 423 (632)
+.|..+.||++...+|..+++|..... ....+..|++++..+.+|.- +.+++++....+..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 456669999998777888999997654 23457889999998854522 556888888777889999999998874 2
Q ss_pred ccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc----------------------------------------------
Q 006747 424 HGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV---------------------------------------------- 457 (632)
Q Consensus 424 ~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------------- 457 (632)
.. .+ ...++.++++.|+.||+..
T Consensus 105 ~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 105 SH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp SC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred Cc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 11 11 2256667777777777642
Q ss_pred ---------CCCceecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 458 ---------GGKFILGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 458 ---------~~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
...++|+|++|.||+++++..++|+|||.+.
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887777899999863
No 392
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.96 E-value=3.3e-12 Score=126.22 Aligned_cols=145 Identities=19% Similarity=0.165 Sum_probs=94.7
Q ss_pred CCCCCcceEecCCCCeEEEEEeCC---CCcccccCchhhcCCCCCcEEeccCCccCCCCCc-cccCCCCCCe--EeecCC
Q 006747 51 VCTSWVGITCTKNGSRVLAVRLPG---VGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPS-NVLSLSSLRF--LYLQNN 124 (632)
Q Consensus 51 ~c~~w~gv~c~~~~~~v~~l~l~~---~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~--L~Ls~N 124 (632)
.| +|.|+.|+.++.+|..+-.++ ..+.|.++++.+..|+. .|...+|..++.++- .+...+.|.. ++++.|
T Consensus 77 l~-~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 77 LK-AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HH-HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HH-hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 45 799999998777886666655 45667887766555543 344444444443332 2455555655 667777
Q ss_pred cCCccCCCCc------cCCCcEEEccCCCCcc--cCCccccCCCCccceecccccccccCCCCCCC--CCcEEEcccCCC
Q 006747 125 NFSGNIPSSL------SPQLNWVDLSFNSITG--NIPASIRNLSHLVGLNLQNNSLTGFIPNFNLS--RLRHLNLSYNHL 194 (632)
Q Consensus 125 ~l~g~~p~~~------~~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~--~L~~l~ls~N~l 194 (632)
+.. .++..+ .++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++...-..+. +|+.|+|++|.+
T Consensus 154 ~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 154 RRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp SHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTT
T ss_pred HHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcC
Confidence 533 222211 2678888888888887 55677778888888888888888752211222 888888888888
Q ss_pred CCCCc
Q 006747 195 NGSVP 199 (632)
Q Consensus 195 ~g~~p 199 (632)
++.+|
T Consensus 233 ~~~~~ 237 (267)
T 3rw6_A 233 CDTFR 237 (267)
T ss_dssp GGGCS
T ss_pred ccccC
Confidence 87666
No 393
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.95 E-value=2.4e-09 Score=111.59 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=103.7
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEec--ccc--cCHHHHHHHHHHHHhhcC-CCCccceeEEEEeC---CceEEEEec
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLK--EVV--MGKREFEQQMEVVGRLSQ-HPNVVPIRAYYFSK---DEKLLVYDF 413 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~--~~~--~~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~---~~~~lv~E~ 413 (632)
+.++.|.++.||+.... +..+++|+.. ... .....+.+|.+++..+.+ +..+.++++++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 35788999999998876 4678888876 332 224568889999998843 34578888888766 347999999
Q ss_pred ccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc------------------------------------
Q 006747 414 IEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAV------------------------------------ 457 (632)
Q Consensus 414 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 457 (632)
++|..+.+... ..++...+..++.++++.|+.||+..
T Consensus 123 v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99977643211 23667788889999999999999731
Q ss_pred -------------------CCCceecCCCCCCeeecCCCC--eEEcccCCCCC
Q 006747 458 -------------------GGKFILGNIKSSNVLLSQDLQ--GCISDFGLTPL 489 (632)
Q Consensus 458 -------------------~~~ivHrDlk~~NILl~~~~~--~ki~DfGla~~ 489 (632)
.+.++|+|+++.||++++++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999998753 68999998754
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.92 E-value=2.3e-11 Score=131.19 Aligned_cols=150 Identities=19% Similarity=0.120 Sum_probs=113.7
Q ss_pred CeEEEEEeCCCCcccc----cCchhhcCCCCCcEEeccCCccCCC----CCccccCCCCCCeEeecCCcCCccCCCCcc-
Q 006747 65 SRVLAVRLPGVGLYGP----IPANTLEKLDSLMILSLRSNHLSGD----LPSNVLSLSSLRFLYLQNNNFSGNIPSSLS- 135 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~----lp~~~l~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~- 135 (632)
..+..|+|+++.+.+. +.+..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 4688899999988753 2232344689999999999999854 677788899999999999998754433332
Q ss_pred ------CCCcEEEccCCCCccc----CCccccCCCCccceecccccccccCCC-C------CCCCCcEEEcccCCCCC--
Q 006747 136 ------PQLNWVDLSFNSITGN----IPASIRNLSHLVGLNLQNNSLTGFIPN-F------NLSRLRHLNLSYNHLNG-- 196 (632)
Q Consensus 136 ------~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~~~~p~-~------~~~~L~~l~ls~N~l~g-- 196 (632)
++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++..+. + ..++|+.|+|++|++++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 4899999999999876 567778889999999999998865432 1 26799999999999986
Q ss_pred --CCcccccCCCC---CCccCCC
Q 006747 197 --SVPLALQKFPP---SSFEGNS 214 (632)
Q Consensus 197 --~~p~~~~~~~~---~~~~~n~ 214 (632)
.+|..+..++. ..+.+|.
T Consensus 387 ~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHHHHHHHhCCCccEEECCCCC
Confidence 67766544443 3455554
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.91 E-value=5.2e-11 Score=128.49 Aligned_cols=134 Identities=21% Similarity=0.221 Sum_probs=107.1
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCC----CCCccccCCCCCCeEeecCCcCCccCCCCcc---C-
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSG----DLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS---P- 136 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~- 136 (632)
.+++.|+|+++.++.......+..+++|+.|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+. .
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3688999999998754444347889999999999999984 4577788899999999999999764443332 2
Q ss_pred ---CCcEEEccCCCCcc----cCCccccCCCCccceecccccccccCCC-------CCCCCCcEEEcccCCCCCCC
Q 006747 137 ---QLNWVDLSFNSITG----NIPASIRNLSHLVGLNLQNNSLTGFIPN-------FNLSRLRHLNLSYNHLNGSV 198 (632)
Q Consensus 137 ---~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~l~l~~N~l~~~~p~-------~~~~~L~~l~ls~N~l~g~~ 198 (632)
+|++|+|++|+++. .+|..+.++++|+.|+|++|.+++..+. ...++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 158 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAAS 158 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHH
Confidence 69999999999984 5788999999999999999998764332 13568999999999998643
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.83 E-value=1.3e-10 Score=121.70 Aligned_cols=132 Identities=18% Similarity=0.181 Sum_probs=76.2
Q ss_pred CeEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccc-----cCCCCCCeEeecCCcCCcc----CCCCc-
Q 006747 65 SRVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNV-----LSLSSLRFLYLQNNNFSGN----IPSSL- 134 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g~----~p~~~- 134 (632)
..+..|+|++|.+...-.......+++|+.|+|++|+|+..-...+ ...++|++|+|++|.|+.. ++..+
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 3577777777776533222223345567777777777763322222 2356677777777777531 11111
Q ss_pred -cCCCcEEEccCCCCccc----CCccccCCCCccceecccccccccCCC-----C-CCCCCcEEEcccCCCCC
Q 006747 135 -SPQLNWVDLSFNSITGN----IPASIRNLSHLVGLNLQNNSLTGFIPN-----F-NLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 135 -~~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~~~~p~-----~-~~~~L~~l~ls~N~l~g 196 (632)
.++|++|||++|.|+.. ++..+..+++|+.|+|++|.|+..... . ..++|++|||++|.|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 25677777777777642 345556666777777777777542211 1 34667777777777663
No 397
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77 E-value=3.1e-09 Score=107.96 Aligned_cols=180 Identities=16% Similarity=0.215 Sum_probs=115.9
Q ss_pred HhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCc--cceeEEEEeCC---ceEEEEecccCC
Q 006747 343 VLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNV--VPIRAYYFSKD---EKLLVYDFIEAG 417 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~ni--v~l~~~~~~~~---~~~lv~E~~~~g 417 (632)
.++.|....||+.. ..+++|+.... .....+.+|.+++..+..+..+ .+.+++....+ ..|+||||++|.
T Consensus 27 ~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~ 101 (304)
T 3sg8_A 27 ISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV 101 (304)
T ss_dssp EEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred ecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence 47889999999862 56888886533 2245788999999888544433 34444433322 347899999998
Q ss_pred CHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 006747 418 SFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA----------------------------------------- 456 (632)
Q Consensus 418 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------------------------------------- 456 (632)
.+...... .++...+..++.++++.++.||+.
T Consensus 102 ~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 102 PLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp ECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred ECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 87653221 245566677777777777777751
Q ss_pred --------------cCCCceecCCCCCCeeecC--CCCeEEcccCCCCCCCCCC------CC---CCCC-------cc--
Q 006747 457 --------------VGGKFILGNIKSSNVLLSQ--DLQGCISDFGLTPLMNTPT------VP---SRSA-------GY-- 502 (632)
Q Consensus 457 --------------~~~~ivHrDlk~~NILl~~--~~~~ki~DfGla~~~~~~~------~~---~~t~-------~y-- 502 (632)
..+.++|+|+++.||++++ ...+.|.||+.+....... .. .+.. +|
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1245899999999999998 5668899999875532210 00 0000 01
Q ss_pred cC-CccccCCCCCccchhhHHHHHHHHHHhCCCCC
Q 006747 503 RA-PEVIETKKPTQKSDVYSFGVLLLEMLTGKAPI 536 (632)
Q Consensus 503 ~a-PE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~ 536 (632)
.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11 111110 112258999999999999998775
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.61 E-value=5.1e-10 Score=117.06 Aligned_cols=131 Identities=21% Similarity=0.162 Sum_probs=96.7
Q ss_pred eEEEEEeCCCCcccccCch---hhc-CCCCCcEEeccCCccCCCCCccc-cCCCCCCeEeecCCcCCccCCCCc------
Q 006747 66 RVLAVRLPGVGLYGPIPAN---TLE-KLDSLMILSLRSNHLSGDLPSNV-LSLSSLRFLYLQNNNFSGNIPSSL------ 134 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~---~l~-~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~------ 134 (632)
.+..|+|+++.++..-... .+. ...+|+.|+|++|.|+..-...+ ..+++|++|+|++|.|+..-...+
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 5789999999987432220 222 23799999999999974333333 356789999999999975433332
Q ss_pred -cCCCcEEEccCCCCcc----cCCccccCCCCccceecccccccccC----CC-C-CCCCCcEEEcccCCCCC
Q 006747 135 -SPQLNWVDLSFNSITG----NIPASIRNLSHLVGLNLQNNSLTGFI----PN-F-NLSRLRHLNLSYNHLNG 196 (632)
Q Consensus 135 -~~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~l~l~~N~l~~~~----p~-~-~~~~L~~l~ls~N~l~g 196 (632)
.++|+.|+|++|.|+. .++..+..+++|+.|+|++|.|+..- .. + ..++|+.|+|++|.|+.
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 2679999999999975 35556678999999999999997532 11 1 45789999999999974
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.59 E-value=1.2e-07 Score=97.33 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=25.2
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccC
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLS 103 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~ 103 (632)
.+..|+|+. +++ .|+..+|.++++|+.|+|++|.+.
T Consensus 102 ~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 102 TLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp TCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCC
T ss_pred CCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCcc
Confidence 466677777 665 577777778888888888877764
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.54 E-value=8.4e-08 Score=98.51 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=40.1
Q ss_pred ccCchhhcC--------CCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCC
Q 006747 80 PIPANTLEK--------LDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFS 127 (632)
Q Consensus 80 ~lp~~~l~~--------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 127 (632)
.||...|.+ +++|+.|+|++ +++..-+..|.++++|+.|+|++|.++
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc
Confidence 577778888 99999999999 888666678999999999999999875
No 401
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=7.4e-09 Score=97.02 Aligned_cols=111 Identities=11% Similarity=0.174 Sum_probs=84.4
Q ss_pred hhcCCCCCcEEeccCC-ccCC----CCCccccCCCCCCeEeecCCcCCccCCCCc----c--CCCcEEEccCCCCccc--
Q 006747 85 TLEKLDSLMILSLRSN-HLSG----DLPSNVLSLSSLRFLYLQNNNFSGNIPSSL----S--PQLNWVDLSFNSITGN-- 151 (632)
Q Consensus 85 ~l~~l~~L~~L~Ls~N-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----~--~~L~~L~Ls~N~l~g~-- 151 (632)
.+...++|++|+|++| .+.. .+...+...++|++|+|++|.++..-...+ . ++|+.|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 6778899999999999 8873 234556677899999999999874221122 1 6899999999999854
Q ss_pred --CCccccCCCCccceec--ccccccccCCC-----C-CCCCCcEEEcccCCCC
Q 006747 152 --IPASIRNLSHLVGLNL--QNNSLTGFIPN-----F-NLSRLRHLNLSYNHLN 195 (632)
Q Consensus 152 --~p~~~~~l~~L~~l~l--~~N~l~~~~p~-----~-~~~~L~~l~ls~N~l~ 195 (632)
+...+...++|+.|+| ++|.+...-.. . ..++|+.|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 5667788889999999 88998743211 1 4578999999999875
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.50 E-value=5.4e-09 Score=116.37 Aligned_cols=131 Identities=15% Similarity=0.142 Sum_probs=82.0
Q ss_pred eEEEEEeCCCCcccccCchhhc-CCCCCcEEecc----CCccCCC-----CCccccCCCCCCeEeecCC--cCCccCCCC
Q 006747 66 RVLAVRLPGVGLYGPIPANTLE-KLDSLMILSLR----SNHLSGD-----LPSNVLSLSSLRFLYLQNN--NFSGNIPSS 133 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~-~l~~L~~L~Ls----~N~l~g~-----~p~~~~~l~~L~~L~Ls~N--~l~g~~p~~ 133 (632)
++..|+|..+.+++..+. .+. .+++|+.|+|+ .|.+++. ++..+.++++|++|+|+++ .+++..+..
T Consensus 379 ~L~~L~l~~~~l~~~~~~-~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLE-SIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TCSEEEEEESCCCHHHHH-HHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred cCeEEEeecCCccHHHHH-HHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 355556655666655444 233 36677777775 5666643 2333556777777777642 355443333
Q ss_pred c---cCCCcEEEccCCCCcc-cCCccccCCCCccceeccccccccc-CCCC--CCCCCcEEEcccCCCCCC
Q 006747 134 L---SPQLNWVDLSFNSITG-NIPASIRNLSHLVGLNLQNNSLTGF-IPNF--NLSRLRHLNLSYNHLNGS 197 (632)
Q Consensus 134 ~---~~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~~~-~p~~--~~~~L~~l~ls~N~l~g~ 197 (632)
+ .++|++|+|++|++++ .++..+..+++|+.|+|++|.+++. ++.+ .+++|+.|+|++|+++..
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 3 2578888888888876 3455567778888888888887643 2222 577888888888887754
No 403
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.48 E-value=8.2e-09 Score=101.83 Aligned_cols=101 Identities=24% Similarity=0.296 Sum_probs=65.4
Q ss_pred hcCCCCCcE--EeccCCccC---CCCCccccCCCCCCeEeecCCcCCc--cCCCCc--cCCCcEEEccCCCCcccCCccc
Q 006747 86 LEKLDSLMI--LSLRSNHLS---GDLPSNVLSLSSLRFLYLQNNNFSG--NIPSSL--SPQLNWVDLSFNSITGNIPASI 156 (632)
Q Consensus 86 l~~l~~L~~--L~Ls~N~l~---g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~ 156 (632)
+...+.|.. ++++.|... +.++....++++|+.|+|++|+|++ .+|..+ .++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444444444 566777432 2222223467788888888888886 444443 27788888888888864 344
Q ss_pred cCCC--CccceecccccccccCCCC---------CCCCCcEEE
Q 006747 157 RNLS--HLVGLNLQNNSLTGFIPNF---------NLSRLRHLN 188 (632)
Q Consensus 157 ~~l~--~L~~l~l~~N~l~~~~p~~---------~~~~L~~l~ 188 (632)
..+. +|+.|+|++|.+++.+|.. .+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 5454 8888888888888876631 577777775
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.39 E-value=7.6e-07 Score=90.93 Aligned_cols=132 Identities=13% Similarity=0.160 Sum_probs=93.0
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcC--CC-CccceeEEEEeCCceEEEEecccCCC
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQ--HP-NVVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~--h~-niv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
+.++.|....||+. +..+++|+..... ....+..|.+++..+.+ .+ .+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 35788999999987 6778888775322 13458899999988843 12 23445544 56789999999988
Q ss_pred HhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccC----------------------------------------
Q 006747 419 FSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVG---------------------------------------- 458 (632)
Q Consensus 419 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~---------------------------------------- 458 (632)
+...... .++...+..++.++++.++.||+...
T Consensus 114 l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 7633211 14445566677777777777774321
Q ss_pred --------------------CCceecCCCCCCeeecCCCCeEEcccCCCCC
Q 006747 459 --------------------GKFILGNIKSSNVLLSQDLQGCISDFGLTPL 489 (632)
Q Consensus 459 --------------------~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 489 (632)
+.++|+|++|.||+++++..+.|.||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999977789999998743
No 405
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.23 E-value=6.7e-06 Score=81.48 Aligned_cols=133 Identities=16% Similarity=0.172 Sum_probs=91.8
Q ss_pred Ccccee-EEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHhhh
Q 006747 345 GKGSYG-TTYKAILE-EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSAL 422 (632)
Q Consensus 345 g~G~fg-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~ 422 (632)
..|..| .||+.... ++..+++|+-... ...++.+|.+.+..+..+--|.++++++.+.+..++|||++++.++.+.
T Consensus 33 ~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 33 NVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp ECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred cCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence 334444 68987654 4667888986543 2456888999998886555577899999999999999999999877664
Q ss_pred hccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhc----------------------------------------------
Q 006747 423 LHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA---------------------------------------------- 456 (632)
Q Consensus 423 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------------------------------------------- 456 (632)
..... ..+..+..+++..|+-||..
T Consensus 111 ~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 111 LEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 43210 11223344444444444431
Q ss_pred -----c----CCCceecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 457 -----V----GGKFILGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 457 -----~----~~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
. .+.++|+|+.+.||++++++.+-|.||+.+.
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1 1237999999999999988878899999763
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.23 E-value=1.9e-07 Score=103.76 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=93.6
Q ss_pred eEEEEEeCCCC-ccc-ccCchhhcCCCCCcEEeccCCccCCC----CCccccCCCCCCeEeecCCcCCccCCCCc-----
Q 006747 66 RVLAVRLPGVG-LYG-PIPANTLEKLDSLMILSLRSNHLSGD----LPSNVLSLSSLRFLYLQNNNFSGNIPSSL----- 134 (632)
Q Consensus 66 ~v~~l~l~~~~-l~g-~lp~~~l~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----- 134 (632)
++..|+|.++. +.. .++. ...++++|++|+|++|.+++. ++..+.++++|++|+|++|.+++.-+..+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 38888888775 221 1222 345789999999999998765 44456788999999999999984322222
Q ss_pred -cCCCcEEEccCCCCcccCCccccCCCCccceecccccccccCC---C--CCCCCCcEEEcccCCCCCCCccccc
Q 006747 135 -SPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIP---N--FNLSRLRHLNLSYNHLNGSVPLALQ 203 (632)
Q Consensus 135 -~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p---~--~~~~~L~~l~ls~N~l~g~~p~~~~ 203 (632)
.++|+.|+|++|.+.+ +|..+.++++|+.|+++++......+ . ..+++|+.|+++++.. +.+|..+.
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~ 290 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFP 290 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGG
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHh
Confidence 2789999999999986 77888999999999998643321111 1 1567788888877532 34554443
No 407
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.21 E-value=7.3e-06 Score=82.17 Aligned_cols=139 Identities=17% Similarity=0.189 Sum_probs=90.5
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCC---CccceeEEEEeCCceEEEEecccCC
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHP---NVVPIRAYYFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~---niv~l~~~~~~~~~~~lv~E~~~~g 417 (632)
+.|+.|.++.||++...+|+.++||+..... .....|..|.+.+..+ ++. .+.+++++. ..++||||++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L-~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWL-GRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHH-TCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHH-HhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 4588999999999998889999999975432 2346789999999999 444 577777763 468999999998
Q ss_pred CHhh-----------hhccCCC--CCC--------------CcCCHHHHH-----HHH---------------HHHHHHH
Q 006747 418 SFSA-----------LLHGNRG--IGR--------------TPLDWESRV-----KIS---------------LGSAKGI 450 (632)
Q Consensus 418 ~L~~-----------~l~~~~~--~~~--------------~~l~~~~~~-----~i~---------------~~ia~~l 450 (632)
.+.. .+|.... .+. -.-+|.... .-. ..+-+.+
T Consensus 96 ~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~ 175 (288)
T 3d1u_A 96 PPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVL 175 (288)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 7431 2332211 000 012443221 100 0111122
Q ss_pred HHHH----hccCCCceecCCCCCCeeecCCCCeEEcccCCC
Q 006747 451 AHIH----AAVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487 (632)
Q Consensus 451 ~~LH----~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla 487 (632)
..+. ....+.++|+|+.+.||+++++ .+.|.|| .+
T Consensus 176 ~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~ 214 (288)
T 3d1u_A 176 DALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AA 214 (288)
T ss_dssp HTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CC
T ss_pred HHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-Cc
Confidence 2232 1235689999999999999984 5889999 54
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.21 E-value=7.5e-06 Score=82.94 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=87.0
Q ss_pred HhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCC--CccceeEEEE-eCCceEEEEecccCCCH
Q 006747 343 VLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP--NVVPIRAYYF-SKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~--niv~l~~~~~-~~~~~~lv~E~~~~g~L 419 (632)
.++.|....||+. +..+++|+-... .....+..|.+++..+.+|- .|.+.+.++. ..+..++||||++|..+
T Consensus 26 ~l~~G~~n~v~~v----g~~~VlR~~~~~-~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l 100 (306)
T 3tdw_A 26 SLGEGFRNYAILV----NGDWVFRFPKSQ-QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL 100 (306)
T ss_dssp EEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred ecCCCcceeEEEE----CCEEEEEecCCc-hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence 4678888899987 567888885322 22457899999999995442 2556676664 34457899999999877
Q ss_pred hhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 006747 420 SALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAA------------------------------------------- 456 (632)
Q Consensus 420 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------- 456 (632)
...... .++...+..++.++++.|+.||+.
T Consensus 101 ~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 101 GEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp HHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred chhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 653111 012223333333333333333321
Q ss_pred --------------cCCCceecCCCCCCeeecC---CCC-eEEcccCCCC
Q 006747 457 --------------VGGKFILGNIKSSNVLLSQ---DLQ-GCISDFGLTP 488 (632)
Q Consensus 457 --------------~~~~ivHrDlk~~NILl~~---~~~-~ki~DfGla~ 488 (632)
..+.++|+|+++.||++++ ++. +.|.||+.+.
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2346799999999999997 455 4899999764
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.11 E-value=1.3e-07 Score=105.14 Aligned_cols=106 Identities=11% Similarity=0.063 Sum_probs=49.7
Q ss_pred CCCCCcEEeccCCccCCCCCcccc-CCCCCCeEeec--C----CcCCccCCC--C----c--cCCCcEEEccCCCCcccC
Q 006747 88 KLDSLMILSLRSNHLSGDLPSNVL-SLSSLRFLYLQ--N----NNFSGNIPS--S----L--SPQLNWVDLSFNSITGNI 152 (632)
Q Consensus 88 ~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls--~----N~l~g~~p~--~----~--~~~L~~L~Ls~N~l~g~~ 152 (632)
.+++|+.|+++.|++++..+..+. ++++|+.|+|+ + |.+++ .|. . + .++|+.|+|++ .+++..
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 355666666666666544333443 35666666666 2 33431 111 0 0 14555555544 444433
Q ss_pred CccccC-CCCccceecccccccccCCC---CCCCCCcEEEcccCCCC
Q 006747 153 PASIRN-LSHLVGLNLQNNSLTGFIPN---FNLSRLRHLNLSYNHLN 195 (632)
Q Consensus 153 p~~~~~-l~~L~~l~l~~N~l~~~~p~---~~~~~L~~l~ls~N~l~ 195 (632)
+..+.. +++|+.|+|++|.+++.... ..+++|+.|+|++|.++
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 333333 55555555555555432221 13455555555555553
No 410
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.09 E-value=8e-06 Score=84.57 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=55.4
Q ss_pred Hh-CccceeEEEEEEEc-------CCcEEEEEEecccc---c-CHHHHHHHHHHHHhhcCC--CCccceeEEEEeC---C
Q 006747 343 VL-GKGSYGTTYKAILE-------EGTTVVVKRLKEVV---M-GKREFEQQMEVVGRLSQH--PNVVPIRAYYFSK---D 405 (632)
Q Consensus 343 ~l-g~G~fg~V~~~~~~-------~~~~vavK~~~~~~---~-~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~---~ 405 (632)
.| +.|....+|+.... ++..+++|+..... . ....+..|.+++..+..+ -.+.++++++.+. +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 56 78889999998764 26778888865432 1 224578888888888554 3466788777654 3
Q ss_pred ceEEEEecccCCCHh
Q 006747 406 EKLLVYDFIEAGSFS 420 (632)
Q Consensus 406 ~~~lv~E~~~~g~L~ 420 (632)
..++||||++|..+.
T Consensus 107 ~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 107 TPFFLMDYVEGVVPP 121 (357)
T ss_dssp SCEEEEECCCCBCCC
T ss_pred CceEEEEecCCCChh
Confidence 468999999987654
No 411
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.05 E-value=1.6e-05 Score=82.43 Aligned_cols=142 Identities=10% Similarity=0.092 Sum_probs=87.8
Q ss_pred HhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCC-CccceeEEEEeC-CceEEEEecccCCCHh
Q 006747 343 VLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP-NVVPIRAYYFSK-DEKLLVYDFIEAGSFS 420 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~~~~~-~~~~lv~E~~~~g~L~ 420 (632)
.++.|....+|+... ++..+++|..... ..+..|..++..+..+. .+.++++++... +..++||||+++..+.
T Consensus 48 ~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~ 122 (362)
T 3ovc_A 48 QLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQ 122 (362)
T ss_dssp EEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETT
T ss_pred ECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCcc
Confidence 467888999999876 5788899887532 36889999999884332 245677777654 5689999999986554
Q ss_pred hh------------------hccCCCC--------C-------------------CCcCCHHHH------HHHHHHHHHH
Q 006747 421 AL------------------LHGNRGI--------G-------------------RTPLDWESR------VKISLGSAKG 449 (632)
Q Consensus 421 ~~------------------l~~~~~~--------~-------------------~~~l~~~~~------~~i~~~ia~~ 449 (632)
+. ||..... + .....|... ......+..-
T Consensus 123 ~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 202 (362)
T 3ovc_A 123 DLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDEL 202 (362)
T ss_dssp TSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHH
Confidence 21 1211000 0 000112111 0111111122
Q ss_pred HHHHHhcc-CCCceecCCCCCCeeecCCCCeEEcccCCCCC
Q 006747 450 IAHIHAAV-GGKFILGNIKSSNVLLSQDLQGCISDFGLTPL 489 (632)
Q Consensus 450 l~~LH~~~-~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~ 489 (632)
+.++.... .+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 203 ~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 203 MLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 22332111 25689999999999999888889999998754
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.00 E-value=4.5e-07 Score=84.73 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=82.6
Q ss_pred CeEEEEEeCCC-Ccccc----cCchhhcCCCCCcEEeccCCccCC----CCCccccCCCCCCeEeecCCcCCcc----CC
Q 006747 65 SRVLAVRLPGV-GLYGP----IPANTLEKLDSLMILSLRSNHLSG----DLPSNVLSLSSLRFLYLQNNNFSGN----IP 131 (632)
Q Consensus 65 ~~v~~l~l~~~-~l~g~----lp~~~l~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p 131 (632)
..++.|+|+++ .+... +. ..+...++|++|+|++|.|+. .+...+...++|++|+|++|.++.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~-~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACA-EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHH-HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHH-HHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 46888999998 77521 32 256778999999999999973 2344566678999999999999843 22
Q ss_pred CCcc--CCCcEEEc--cCCCCccc----CCccccCCCCccceeccccccc
Q 006747 132 SSLS--PQLNWVDL--SFNSITGN----IPASIRNLSHLVGLNLQNNSLT 173 (632)
Q Consensus 132 ~~~~--~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~ 173 (632)
..+. .+|+.|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2333 68999999 88999864 4455667799999999999985
No 413
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.98 E-value=4.9e-07 Score=100.43 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=55.3
Q ss_pred cCCCCCcEEeccCCccCCCCCcccc-CCCCCCeEeecCC-cCCcc-CCCCc--cCCCcEEEccCCCCcccCCcccc----
Q 006747 87 EKLDSLMILSLRSNHLSGDLPSNVL-SLSSLRFLYLQNN-NFSGN-IPSSL--SPQLNWVDLSFNSITGNIPASIR---- 157 (632)
Q Consensus 87 ~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N-~l~g~-~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~---- 157 (632)
..+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+ .++|+.|+|++|.+++..+..+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3456666666666666654444454 4666666666666 33321 22111 15666666666666554333332
Q ss_pred CCCCccceecccccccccCCC-----C--CCCCCcEEEcccC
Q 006747 158 NLSHLVGLNLQNNSLTGFIPN-----F--NLSRLRHLNLSYN 192 (632)
Q Consensus 158 ~l~~L~~l~l~~N~l~~~~p~-----~--~~~~L~~l~ls~N 192 (632)
.+++|+.|+|++|. +.+.. . .+++|++|+|++|
T Consensus 182 ~~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 182 TYTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp TCCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 44566666666665 11111 0 3466666666666
No 414
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.96 E-value=3.9e-05 Score=78.60 Aligned_cols=141 Identities=18% Similarity=0.226 Sum_probs=80.1
Q ss_pred HhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCC-CCccceeE------EEEeCCceEEEEeccc
Q 006747 343 VLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQH-PNVVPIRA------YYFSKDEKLLVYDFIE 415 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~------~~~~~~~~~lv~E~~~ 415 (632)
.|+.|..+.||+....+| .+++|+... .......|.+++..+.++ -.+.+++. +....+..++||||++
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 456677889999887654 588998875 234445556655555321 12333332 1234567899999999
Q ss_pred CCCHh--------------hhhccCC-CC--C------CCcCCHHHHHH-------------------------------
Q 006747 416 AGSFS--------------ALLHGNR-GI--G------RTPLDWESRVK------------------------------- 441 (632)
Q Consensus 416 ~g~L~--------------~~l~~~~-~~--~------~~~l~~~~~~~------------------------------- 441 (632)
|..+. ..+|... .. . ...-.|.....
T Consensus 115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (346)
T 2q83_A 115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG 194 (346)
T ss_dssp CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 86542 1122110 00 0 01123432110
Q ss_pred HHHHHHHHHHHHHh----------ccCCCceecCCCCCCeeecCCCCeEEcccCCC
Q 006747 442 ISLGSAKGIAHIHA----------AVGGKFILGNIKSSNVLLSQDLQGCISDFGLT 487 (632)
Q Consensus 442 i~~~ia~~l~~LH~----------~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla 487 (632)
+...+.+++++|+. .....++|+|+++.||+++.++.+.|+||+.+
T Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 11123345666663 13468999999999999988889999999965
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.96 E-value=2.1e-06 Score=88.98 Aligned_cols=40 Identities=13% Similarity=0.160 Sum_probs=17.2
Q ss_pred hhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCC
Q 006747 85 TLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFS 127 (632)
Q Consensus 85 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 127 (632)
.+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.++
T Consensus 167 ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~ 206 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLP 206 (362)
T ss_dssp HHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCC
T ss_pred HHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCC
Confidence 3444555555555554200 1222 22 445555555544443
No 416
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.76 E-value=0.00015 Score=73.27 Aligned_cols=139 Identities=17% Similarity=0.137 Sum_probs=91.8
Q ss_pred HhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCC--CCccceeEEEEeCCceEEEEecccCCCHh
Q 006747 343 VLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQH--PNVVPIRAYYFSKDEKLLVYDFIEAGSFS 420 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 420 (632)
.|+.|.+..+|+... ++..+++|+.... ....+..|.+.|..+..+ ..+.+.++++...+..++||||+++..+.
T Consensus 43 ~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~ 119 (312)
T 3jr1_A 43 KLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK 119 (312)
T ss_dssp EECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred EeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence 578899999999876 4678888887643 356788999988888543 56788898888888899999999987642
Q ss_pred h-----------hhccCCC---CCC--------------CcCCHHHHH-----HHHHH--------------HHHH-HHH
Q 006747 421 A-----------LLHGNRG---IGR--------------TPLDWESRV-----KISLG--------------SAKG-IAH 452 (632)
Q Consensus 421 ~-----------~l~~~~~---~~~--------------~~l~~~~~~-----~i~~~--------------ia~~-l~~ 452 (632)
. .+|.... .+. -.-+|.... .-..+ +... ...
T Consensus 120 ~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~ 199 (312)
T 3jr1_A 120 QSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADT 199 (312)
T ss_dssp TTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 1 2332211 000 012564321 11111 1111 123
Q ss_pred HHh-ccCCCceecCCCCCCeeecCCCCeEEcccC
Q 006747 453 IHA-AVGGKFILGNIKSSNVLLSQDLQGCISDFG 485 (632)
Q Consensus 453 LH~-~~~~~ivHrDlk~~NILl~~~~~~ki~DfG 485 (632)
|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 200 L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 200 LSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred hccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 321 2256899999999999999887 8899974
No 417
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.74 E-value=0.00021 Score=74.95 Aligned_cols=74 Identities=11% Similarity=0.188 Sum_probs=48.7
Q ss_pred hHhCccceeEEEEEEEc-CCcEEEEEEecccc--------cCHHHHHHHHHHHHhhcCC-CCcc-ceeEEEEeCCceEEE
Q 006747 342 EVLGKGSYGTTYKAILE-EGTTVVVKRLKEVV--------MGKREFEQQMEVVGRLSQH-PNVV-PIRAYYFSKDEKLLV 410 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~~h-~niv-~l~~~~~~~~~~~lv 410 (632)
+.+|.|.++.||++... +++.++||...... .....+..|.+++..+..+ +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 46889999764321 1234567788888877433 3334 45433 45567899
Q ss_pred EecccCC
Q 006747 411 YDFIEAG 417 (632)
Q Consensus 411 ~E~~~~g 417 (632)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 418
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.71 E-value=0.00011 Score=77.10 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=80.0
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
.+..+.|+.+ +. .|+..+|.++++|+.++|..| ++..-...|.+ .+|+.++| .|.++..-...|. .+|+.++|
T Consensus 204 ~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 204 GIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred ccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 4666777744 44 677788889999999999875 44333455666 67888888 4555522233443 57888888
Q ss_pred cCCCCc-----ccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccC
Q 006747 144 SFNSIT-----GNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYN 192 (632)
Q Consensus 144 s~N~l~-----g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N 192 (632)
.+|.+. ..-+..|.+|++|+.++|.+ .++..... | .+.+|+.++|..|
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc
Confidence 877765 34456778888888888873 45544333 2 5677888877554
No 419
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.62 E-value=0.00018 Score=75.53 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=52.3
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEc
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDL 143 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~L 143 (632)
.+..+.|++ .+. .|+...|.++.+|+.++|++|+++......|. .++|+.+.|.+| ++..-...|. .+|+.++|
T Consensus 158 ~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 466777775 454 57777788888888888888877733233333 466666666533 4422222222 35555555
Q ss_pred cCCCCcccCCccccCCCCccceec
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNL 167 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l 167 (632)
..| ++..-..+|.+ .+|+.+.|
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE
T ss_pred CCC-ccCcccccccc-CCccEEEe
Confidence 543 33222333333 34444444
No 420
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.53 E-value=0.00011 Score=63.85 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=42.2
Q ss_pred eEeecCCcCC-ccCCCCccCCCcEEEccCCCCcccCCccccCCCCccceeccccccc
Q 006747 118 FLYLQNNNFS-GNIPSSLSPQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLT 173 (632)
Q Consensus 118 ~L~Ls~N~l~-g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 173 (632)
.++.+++.|+ ..+|..+..+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5667777765 4667777778888888888888666667788888888888888654
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.50 E-value=0.00057 Score=72.27 Aligned_cols=75 Identities=12% Similarity=0.055 Sum_probs=46.6
Q ss_pred CCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCCCC---C--CCCcccCCccccCC---CCCccchhhHHHHHHHHH
Q 006747 458 GGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP---S--RSAGYRAPEVIETK---KPTQKSDVYSFGVLLLEM 529 (632)
Q Consensus 458 ~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~---~--~t~~y~aPE~~~~~---~~~~~~DV~s~Gvvl~el 529 (632)
.+.++|+|+++.||++++++ ++|.||+.+......... . -...|.+|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 45899999999999999876 999999987543211000 0 01125555544311 112234556788888887
Q ss_pred HhCC
Q 006747 530 LTGK 533 (632)
Q Consensus 530 ltg~ 533 (632)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.48 E-value=0.00077 Score=67.23 Aligned_cols=73 Identities=18% Similarity=0.275 Sum_probs=53.2
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEecccc-cCHHHHHHHHHHHHhhcCCCC--ccceeEEEEeCCceEEEEecccCCC
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVV-MGKREFEQQMEVVGRLSQHPN--VVPIRAYYFSKDEKLLVYDFIEAGS 418 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~n--iv~l~~~~~~~~~~~lv~E~~~~g~ 418 (632)
+.+|.|..+.||+..+.||+.|++|+-.... .....|+.|.+.|..+.+... +.+.+++ +..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 3578899999999999999999999876432 224568899999988854322 3444443 23478999998765
No 423
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.41 E-value=0.0013 Score=66.85 Aligned_cols=142 Identities=17% Similarity=0.143 Sum_probs=82.6
Q ss_pred hCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCC-CccceeEE-----EEeCCceEEEEecccCC
Q 006747 344 LGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP-NVVPIRAY-----YFSKDEKLLVYDFIEAG 417 (632)
Q Consensus 344 lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~-----~~~~~~~~lv~E~~~~g 417 (632)
++ |....||+....+|+.+++|...........+..|.+++..+..+. .+++++.. ....+..++||||++|.
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~ 112 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR 112 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCCC
Confidence 45 6677899887777778999998744345667788888888774332 24444443 12244567899999875
Q ss_pred CHhh--------------hhcc----CCCCCCCcCCHHHH----HHH---------------HHHHHHHHHHHHhc----
Q 006747 418 SFSA--------------LLHG----NRGIGRTPLDWESR----VKI---------------SLGSAKGIAHIHAA---- 456 (632)
Q Consensus 418 ~L~~--------------~l~~----~~~~~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~~---- 456 (632)
.+.. .+|. .........++... ..+ ...+...++.+...
T Consensus 113 ~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (328)
T 1zyl_A 113 QFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRED 192 (328)
T ss_dssp ECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4320 1221 10001112232211 000 00111223333322
Q ss_pred cCCCceecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 457 VGGKFILGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 457 ~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
....++|+|+++.||+++ + .+.|.||+.+.
T Consensus 193 ~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 193 FTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred CCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 234689999999999999 4 89999998764
No 424
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.39 E-value=0.00013 Score=75.50 Aligned_cols=133 Identities=16% Similarity=0.133 Sum_probs=87.7
Q ss_pred CeEEEEEeCCCCccc-cc-------CchhhcCCCCCcEEeccCCccC---------CCCCccccCCCCCCeEeecCCcCC
Q 006747 65 SRVLAVRLPGVGLYG-PI-------PANTLEKLDSLMILSLRSNHLS---------GDLPSNVLSLSSLRFLYLQNNNFS 127 (632)
Q Consensus 65 ~~v~~l~l~~~~l~g-~l-------p~~~l~~l~~L~~L~Ls~N~l~---------g~~p~~~~~l~~L~~L~Ls~N~l~ 127 (632)
.+|+.|.+...+..| .+ .. ++..+++|+.|.+..+.+. +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~-s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVE-NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHT-THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHH-hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 357777777555443 21 11 3557889999999776432 234455678899999999988411
Q ss_pred ccCCCCccCCCcEEEccCCCCcccCCcccc--CCCCccceeccc--cccccc---------CCCCCCCCCcEEEcccCCC
Q 006747 128 GNIPSSLSPQLNWVDLSFNSITGNIPASIR--NLSHLVGLNLQN--NSLTGF---------IPNFNLSRLRHLNLSYNHL 194 (632)
Q Consensus 128 g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~l~l~~--N~l~~~---------~p~~~~~~L~~l~ls~N~l 194 (632)
.++..-.++|+.|+|..|.++...-..+. .+++|+.|+|+. |...+. +....+++|++|+|++|.+
T Consensus 186 -~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i 264 (362)
T 2ra8_A 186 -SIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEE 264 (362)
T ss_dssp -BCCSCBCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTT
T ss_pred -eeccccCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCC
Confidence 23332247999999999988754444454 789999999863 332221 1112578999999999988
Q ss_pred CCCCc
Q 006747 195 NGSVP 199 (632)
Q Consensus 195 ~g~~p 199 (632)
+...+
T Consensus 265 ~~~~~ 269 (362)
T 2ra8_A 265 QNVVV 269 (362)
T ss_dssp HHHHH
T ss_pred chHHH
Confidence 74433
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.20 E-value=3.4e-05 Score=71.89 Aligned_cols=111 Identities=15% Similarity=0.161 Sum_probs=74.6
Q ss_pred hhcCCCCCcEEeccCC-ccCC----CCCccccCCCCCCeEeecCCcCCccCCCCcc------CCCcEEEccCCCCccc--
Q 006747 85 TLEKLDSLMILSLRSN-HLSG----DLPSNVLSLSSLRFLYLQNNNFSGNIPSSLS------PQLNWVDLSFNSITGN-- 151 (632)
Q Consensus 85 ~l~~l~~L~~L~Ls~N-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~------~~L~~L~Ls~N~l~g~-- 151 (632)
.+.+-+.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|++...--..+. ..|+.|+|++|.|+..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 4556778999999985 7752 1334556667899999999999744333332 6899999999999853
Q ss_pred --CCccccCCCCccceecccccc---cccC----CC-C-CCCCCcEEEcccCCCC
Q 006747 152 --IPASIRNLSHLVGLNLQNNSL---TGFI----PN-F-NLSRLRHLNLSYNHLN 195 (632)
Q Consensus 152 --~p~~~~~l~~L~~l~l~~N~l---~~~~----p~-~-~~~~L~~l~ls~N~l~ 195 (632)
+-..+..-+.|+.|+|++|.. .... -. . .-++|+.|+++.|.+.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 333455567799999986532 2110 00 0 3467888888877543
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.18 E-value=0.0026 Score=64.33 Aligned_cols=144 Identities=11% Similarity=0.095 Sum_probs=80.5
Q ss_pred HhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCC-CccceeEE------EEeCCceEEEEeccc
Q 006747 343 VLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP-NVVPIRAY------YFSKDEKLLVYDFIE 415 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~------~~~~~~~~lv~E~~~ 415 (632)
.|+.|....+|+....+| .+++|..... .....+..|.+++..+.++. .+.+++.. ....+..++|+||++
T Consensus 29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~ 106 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE 106 (322)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC
T ss_pred ccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCC
Confidence 467788889999887655 6778888652 12335667777777764432 12333321 122456789999999
Q ss_pred CCCHhh--------------hhccC-CCCCC------CcCCHHHHHHH------------HHHHHHHHHHHHhc----cC
Q 006747 416 AGSFSA--------------LLHGN-RGIGR------TPLDWESRVKI------------SLGSAKGIAHIHAA----VG 458 (632)
Q Consensus 416 ~g~L~~--------------~l~~~-~~~~~------~~l~~~~~~~i------------~~~ia~~l~~LH~~----~~ 458 (632)
|..+.. .+|.. ..... ....|.....- ...+...++++++. ..
T Consensus 107 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~ 186 (322)
T 2ppq_A 107 GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLP 186 (322)
T ss_dssp CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSC
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCC
Confidence 864321 12211 00010 01124331110 11234456666542 13
Q ss_pred CCceecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 459 GKFILGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 459 ~~ivHrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
..++|+|+.+.||+++++..+.|.||+.+.
T Consensus 187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 479999999999999987667899998653
No 427
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.14 E-value=0.0013 Score=68.29 Aligned_cols=142 Identities=12% Similarity=0.169 Sum_probs=82.9
Q ss_pred HhCccceeEEEEEEEc--------CCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 343 VLGKGSYGTTYKAILE--------EGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+..|-...+|+.... ++..+++|+............+|.+++..+..+.-..++++++.+ .+||||+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 4666777788888764 247888888644333456677899999888666555667766532 2899999
Q ss_pred cCCCHhh-----------------hhccCC-CCCCCcC-CHHHHHHHHHHHH-------------------HHHHHHHhc
Q 006747 415 EAGSFSA-----------------LLHGNR-GIGRTPL-DWESRVKISLGSA-------------------KGIAHIHAA 456 (632)
Q Consensus 415 ~~g~L~~-----------------~l~~~~-~~~~~~l-~~~~~~~i~~~ia-------------------~~l~~LH~~ 456 (632)
+|..+.. .+|... ..+..+. -|.+..++..++. ..+.+|.+.
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 9755431 122221 1111221 2333333333221 223343321
Q ss_pred -----cCCCceecCCCCCCeeecCC----CCeEEcccCCCC
Q 006747 457 -----VGGKFILGNIKSSNVLLSQD----LQGCISDFGLTP 488 (632)
Q Consensus 457 -----~~~~ivHrDlk~~NILl~~~----~~~ki~DfGla~ 488 (632)
....++|+|+.+.||+++++ +.+.|+||..+.
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 12368999999999999887 789999998753
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.08 E-value=9.2e-05 Score=67.66 Aligned_cols=82 Identities=10% Similarity=0.027 Sum_probs=56.0
Q ss_pred CCCcEEeccCCccCCCCCccccCCCCCCeEeecCCc-CCccCCCCcc------CCCcEEEccCCC-CcccCCccccCCCC
Q 006747 90 DSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNN-FSGNIPSSLS------PQLNWVDLSFNS-ITGNIPASIRNLSH 161 (632)
Q Consensus 90 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~------~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 161 (632)
-+|+.|||+++.++..--..+.++++|++|+|+++. ++..--..+. ++|+.|+|+++. ++..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 368888998888874333456788899999999885 6532111122 368888888874 77543345677888
Q ss_pred ccceeccccc
Q 006747 162 LVGLNLQNNS 171 (632)
Q Consensus 162 L~~l~l~~N~ 171 (632)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888764
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.01 E-value=0.0017 Score=65.12 Aligned_cols=139 Identities=11% Similarity=0.035 Sum_probs=74.3
Q ss_pred hHhCccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc-cCCCHh
Q 006747 342 EVLGKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI-EAGSFS 420 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~-~~g~L~ 420 (632)
+.|+.|....+|+. ..+++|+.........+...|.+++..+..+.-..+++++ ..+.-++|+||+ ++..+.
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEECC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccCC
Confidence 45788888999998 5678888764321111235677777776444333455543 344567899999 554332
Q ss_pred h------------------hhccCCCCCCCcCCHHHHHHHHH---------------HHHHHHHHHH----h-ccCCCce
Q 006747 421 A------------------LLHGNRGIGRTPLDWESRVKISL---------------GSAKGIAHIH----A-AVGGKFI 462 (632)
Q Consensus 421 ~------------------~l~~~~~~~~~~l~~~~~~~i~~---------------~ia~~l~~LH----~-~~~~~iv 462 (632)
. .+|..........+...++.-.. .+...+..+. . .....++
T Consensus 97 ~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~ 176 (301)
T 3dxq_A 97 PEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAAC 176 (301)
T ss_dssp HHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEE
T ss_pred HhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceee
Confidence 1 12221110001111111111100 0111112121 1 1234589
Q ss_pred ecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 463 LGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 463 HrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
|+|+.+.||+ .+++.+.|+||..+.
T Consensus 177 HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 177 HCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp CSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred ccCCCcCCEE-ECCCCEEEEeccccc
Confidence 9999999999 666778999998764
No 430
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.95 E-value=0.002 Score=65.59 Aligned_cols=142 Identities=14% Similarity=0.106 Sum_probs=71.8
Q ss_pred hCccceeE-EEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCCC-CccceeEEEEeCCceEEEEecccCCCHhh
Q 006747 344 LGKGSYGT-TYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHP-NVVPIRAYYFSKDEKLLVYDFIEAGSFSA 421 (632)
Q Consensus 344 lg~G~fg~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~~~~~~~~~lv~E~~~~g~L~~ 421 (632)
|+.|.... +|+....++..+++|...... ..++..|++++..+..+. .+.+++.+.. +.-++|||++.+..+.+
T Consensus 26 l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e~l~~~~l~~ 101 (333)
T 3csv_A 26 LAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIEDLGDALFTE 101 (333)
T ss_dssp --------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEECCCCSCBHHH
T ss_pred CCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEeeCCCcchHH
Confidence 44444443 667665446777777654321 123455667766664442 3456666532 23378999997766654
Q ss_pred hhccC---------------------CCCCCCcCCHHHHH-------H-------------HHHHHHHHHHHHHh---cc
Q 006747 422 LLHGN---------------------RGIGRTPLDWESRV-------K-------------ISLGSAKGIAHIHA---AV 457 (632)
Q Consensus 422 ~l~~~---------------------~~~~~~~l~~~~~~-------~-------------i~~~ia~~l~~LH~---~~ 457 (632)
++... .......++..... . ....+...++.+.. ..
T Consensus 102 ~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~ 181 (333)
T 3csv_A 102 VINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEG 181 (333)
T ss_dssp HHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCS
T ss_pred HhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcccC
Confidence 33211 00001111111000 0 00011122233321 12
Q ss_pred CCCceecCCCCCCeeecCC----CCeEEcccCCCCC
Q 006747 458 GGKFILGNIKSSNVLLSQD----LQGCISDFGLTPL 489 (632)
Q Consensus 458 ~~~ivHrDlk~~NILl~~~----~~~ki~DfGla~~ 489 (632)
...++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3579999999999999875 6899999998753
No 431
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.89 E-value=0.0051 Score=65.46 Aligned_cols=74 Identities=8% Similarity=0.083 Sum_probs=46.9
Q ss_pred hHhCccceeEEEEEEEcC-CcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCH
Q 006747 342 EVLGKGSYGTTYKAILEE-GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSF 419 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 419 (632)
+.|+.|-...+|+....+ +..+++|+........-+...|..++..+..+.-..++++++ .+ ..||||+++..+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 357788889999998765 477888887532211112357888888885544445677766 22 359999987443
No 432
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.81 E-value=0.0028 Score=65.54 Aligned_cols=72 Identities=13% Similarity=0.084 Sum_probs=43.1
Q ss_pred HhCccceeEEEEEEEcC---------CcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEec
Q 006747 343 VLGKGSYGTTYKAILEE---------GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDF 413 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~ 413 (632)
.++.|....+|+....+ +..+++|+.........+...|.+++..+..+.-+.++++.. . -++||||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e~ 115 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEEW 115 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEEE
Confidence 46778788899988654 267888887543211112467777887775453344666543 2 3789999
Q ss_pred ccCCC
Q 006747 414 IEAGS 418 (632)
Q Consensus 414 ~~~g~ 418 (632)
++|..
T Consensus 116 i~G~~ 120 (369)
T 3c5i_A 116 LYGDP 120 (369)
T ss_dssp CCSEE
T ss_pred ecCCc
Confidence 98754
No 433
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.69 E-value=0.01 Score=62.78 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=49.2
Q ss_pred HhCccceeEEEEEEEcC--------CcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 343 VLGKGSYGTTYKAILEE--------GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.|+.|....+|+....+ +..+++|+.... .....+..|..++..+.++.-..++++.+. + .+|+||+
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~l 154 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEYI 154 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECCC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEEe
Confidence 47788888999998753 478889888432 122556678888888865544466776543 2 3899999
Q ss_pred cCCC
Q 006747 415 EAGS 418 (632)
Q Consensus 415 ~~g~ 418 (632)
++..
T Consensus 155 ~G~~ 158 (429)
T 1nw1_A 155 PSRP 158 (429)
T ss_dssp CEEE
T ss_pred CCcc
Confidence 8643
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.45 E-value=0.0049 Score=53.37 Aligned_cols=56 Identities=25% Similarity=0.253 Sum_probs=39.7
Q ss_pred EEEeCCCCcc-cccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCC
Q 006747 69 AVRLPGVGLY-GPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFS 127 (632)
Q Consensus 69 ~l~l~~~~l~-g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 127 (632)
.++.++++|+ ..+|.+ + -.+|+.|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777775 456652 1 235788888888888655666778888888888887764
No 435
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.44 E-value=0.01 Score=60.64 Aligned_cols=69 Identities=19% Similarity=0.158 Sum_probs=43.4
Q ss_pred CccceeEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHhhcCC--CCccceeEE------EEeCCceEEEEecccC
Q 006747 345 GKGSYGTTYKAILEEGTTVVVKRLKEVVMGKREFEQQMEVVGRLSQH--PNVVPIRAY------YFSKDEKLLVYDFIEA 416 (632)
Q Consensus 345 g~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~------~~~~~~~~lv~E~~~~ 416 (632)
|.|....||+....+| .+++|+...... ..|.+++..+.++ +.|.+.+.. ....+..++||||++|
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 4444679999987777 899998765432 3455555555322 224444432 2334667899999998
Q ss_pred CCH
Q 006747 417 GSF 419 (632)
Q Consensus 417 g~L 419 (632)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.29 E-value=0.00058 Score=63.55 Aligned_cols=109 Identities=13% Similarity=0.167 Sum_probs=75.3
Q ss_pred CCeEEEEEeCCC-Cccc----ccCchhhcCCCCCcEEeccCCccCC----CCCccccCCCCCCeEeecCCcCCccCCCCc
Q 006747 64 GSRVLAVRLPGV-GLYG----PIPANTLEKLDSLMILSLRSNHLSG----DLPSNVLSLSSLRFLYLQNNNFSGNIPSSL 134 (632)
Q Consensus 64 ~~~v~~l~l~~~-~l~g----~lp~~~l~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 134 (632)
...++.|+|+++ .+.. .|- +.+..=++|+.|+|++|+|.. .+-..+..-+.|++|+|++|+|+..--..+
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la-~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLI-EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHH-HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHH-HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 356888999875 5531 122 356777899999999999982 233445556889999999999984322222
Q ss_pred ------cCCCcEEEccCC---CCcc----cCCccccCCCCccceeccccccc
Q 006747 135 ------SPQLNWVDLSFN---SITG----NIPASIRNLSHLVGLNLQNNSLT 173 (632)
Q Consensus 135 ------~~~L~~L~Ls~N---~l~g----~~p~~~~~l~~L~~l~l~~N~l~ 173 (632)
...|+.|+|++| .+.. .+-..+..-++|+.|+|+.|.+-
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 157999999876 3332 23445666688999999888653
No 437
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.05 E-value=0.054 Score=50.69 Aligned_cols=103 Identities=9% Similarity=0.014 Sum_probs=66.0
Q ss_pred CCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCeeecCCCCeEEcccCCCCCCCCCCCC
Q 006747 417 GSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGKFILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVP 496 (632)
Q Consensus 417 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~ 496 (632)
-+|.++|.... .|+++.+.+.++.|.+++|.-+-....+ ..+=+-|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc--------
Confidence 37888988653 5899999999999999887665211111 1223346889999999999875 2211
Q ss_pred CCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCC
Q 006747 497 SRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAP 535 (632)
Q Consensus 497 ~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p 535 (632)
.....+.|||... ...+.+.-|||+|+++|.-+--..|
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122367888763 3457888999999999998864443
No 438
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.94 E-value=0.017 Score=60.17 Aligned_cols=109 Identities=15% Similarity=0.232 Sum_probs=72.1
Q ss_pred cCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCC-cc--CCCcEEEccCCCCcccCCcccc
Q 006747 81 IPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSS-LS--PQLNWVDLSFNSITGNIPASIR 157 (632)
Q Consensus 81 lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~~L~Ls~N~l~g~~p~~~~ 157 (632)
+...+|.++.+|+.+.+..+..+ .-...|.++++|+.+.+. +.++ .|+.. |. .+|+.++|..| ++..-..+|.
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 44456778888888888766543 335567788888888885 4455 34433 32 57888888755 5544556788
Q ss_pred CCCCccceecccccccccCCC-C-CCCCCcEEEcccCCC
Q 006747 158 NLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHL 194 (632)
Q Consensus 158 ~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l 194 (632)
+|.+|+.+.|..| ++..-.. | ++.+|+.+++.+|..
T Consensus 332 ~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 332 GCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 8888888888654 4432222 2 678888888877643
No 439
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.91 E-value=0.024 Score=58.57 Aligned_cols=102 Identities=15% Similarity=0.187 Sum_probs=51.7
Q ss_pred hhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCC-Ccc--CCCcEEEccCCCCcccCCccccCCCC
Q 006747 85 TLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPS-SLS--PQLNWVDLSFNSITGNIPASIRNLSH 161 (632)
Q Consensus 85 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~ 161 (632)
.+....+|+.+.+..+ +...-...+.++.+|+.+.+..+ ++ .|.. .+. .+|+.+.+..+ +...-...|.++++
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccc
Confidence 4455566666666544 22233445556666666666544 33 2222 221 35666666443 33333445566666
Q ss_pred ccceecccccccccCCC-C-CCCCCcEEEcc
Q 006747 162 LVGLNLQNNSLTGFIPN-F-NLSRLRHLNLS 190 (632)
Q Consensus 162 L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls 190 (632)
|+.+.+.+|.++..... | .+.+|+.++|.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcC
Confidence 66666666555543332 2 45566666554
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.61 E-value=0.003 Score=57.62 Aligned_cols=82 Identities=11% Similarity=0.092 Sum_probs=57.1
Q ss_pred CCCCeEeecCCcCCccCCCCc--cCCCcEEEccCCC-CcccCCccccCC----CCccceeccccc-ccc--cCCCCCCCC
Q 006747 114 SSLRFLYLQNNNFSGNIPSSL--SPQLNWVDLSFNS-ITGNIPASIRNL----SHLVGLNLQNNS-LTG--FIPNFNLSR 183 (632)
Q Consensus 114 ~~L~~L~Ls~N~l~g~~p~~~--~~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~l~l~~N~-l~~--~~p~~~~~~ 183 (632)
-+|+.|||+++.++..--..+ .++|+.|+|+++. ++..-=..++.+ ++|+.|+|+++. ++. ...-..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999874322222 2789999999985 775433445554 479999999975 552 111126899
Q ss_pred CcEEEcccCC-CC
Q 006747 184 LRHLNLSYNH-LN 195 (632)
Q Consensus 184 L~~l~ls~N~-l~ 195 (632)
|++|+|++.. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999874 44
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.48 E-value=0.038 Score=57.50 Aligned_cols=82 Identities=15% Similarity=0.200 Sum_probs=41.7
Q ss_pred CccccCCCCCCeEeecCCcCCccCCCCcc--CCCcEEEccCCCCcccCCccccCCCCccceecccccccccCCC-C-CCC
Q 006747 107 PSNVLSLSSLRFLYLQNNNFSGNIPSSLS--PQLNWVDLSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLS 182 (632)
Q Consensus 107 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~ 182 (632)
...|.++.+|+.+.+.++..+ .-...|. .+|+.+++. +.++..-...|.++.+|+.++|..| ++..-.. | .+.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 345566666666666544322 1112222 456666664 3444344456666666666666544 3322222 2 456
Q ss_pred CCcEEEccc
Q 006747 183 RLRHLNLSY 191 (632)
Q Consensus 183 ~L~~l~ls~ 191 (632)
+|+.+.|..
T Consensus 335 ~L~~i~ip~ 343 (394)
T 4gt6_A 335 QLERIAIPS 343 (394)
T ss_dssp TCCEEEECT
T ss_pred CCCEEEECc
Confidence 666666643
No 442
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.34 E-value=0.069 Score=55.48 Aligned_cols=141 Identities=13% Similarity=0.179 Sum_probs=79.1
Q ss_pred HhCccceeEEEEEEEcC--------CcEEEEEEecccc------------cCH-------HHHHHHHHHHHhhcCCCCcc
Q 006747 343 VLGKGSYGTTYKAILEE--------GTTVVVKRLKEVV------------MGK-------REFEQQMEVVGRLSQHPNVV 395 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~--------~~~vavK~~~~~~------------~~~-------~~~~~e~~~l~~l~~h~niv 395 (632)
.|..|-...+|+...++ ...|.+++.-... .++ +....|.+++..+..+.-..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45566777888877653 3567777763321 111 12234788888886666667
Q ss_pred ceeEEEEeCCceEEEEecccCCCHhh-----------------hhccCC-CCCCCcC-CHHHHHHHHHHHH---------
Q 006747 396 PIRAYYFSKDEKLLVYDFIEAGSFSA-----------------LLHGNR-GIGRTPL-DWESRVKISLGSA--------- 447 (632)
Q Consensus 396 ~l~~~~~~~~~~~lv~E~~~~g~L~~-----------------~l~~~~-~~~~~~l-~~~~~~~i~~~ia--------- 447 (632)
++++++.. .+|+||+++-.|.. .+|... .....+. -|....++..++.
T Consensus 139 kl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 78777632 28999999644321 122211 1112221 1223223322211
Q ss_pred -------------HHHHH----HHhc-cCCCceecCCCCCCeeecCC------CCeEEcccCCC
Q 006747 448 -------------KGIAH----IHAA-VGGKFILGNIKSSNVLLSQD------LQGCISDFGLT 487 (632)
Q Consensus 448 -------------~~l~~----LH~~-~~~~ivHrDlk~~NILl~~~------~~~ki~DfGla 487 (632)
.-+.. |... ....++|+|+.+.||+++++ +.+.++||..+
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a 278 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence 12222 2221 12368999999999999887 78999999865
No 443
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.31 E-value=0.041 Score=57.78 Aligned_cols=73 Identities=12% Similarity=0.103 Sum_probs=47.1
Q ss_pred HhCccceeEEEEEEEcC--------CcEEEEEEecccccCHHHHHHHHHHHHhhcCCCCccceeEEEEeCCceEEEEecc
Q 006747 343 VLGKGSYGTTYKAILEE--------GTTVVVKRLKEVVMGKREFEQQMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFI 414 (632)
Q Consensus 343 ~lg~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~ 414 (632)
.+..|-...+|+....+ +..+++|+........-+..+|.+++..+..+.-..++++.+ . -+.||||+
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~efI 152 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEFI 152 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEECC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEEe
Confidence 45667777888887653 578888886543221123457788887775554455666533 2 37899999
Q ss_pred cCCCH
Q 006747 415 EAGSF 419 (632)
Q Consensus 415 ~~g~L 419 (632)
+|..|
T Consensus 153 ~G~~l 157 (424)
T 3mes_A 153 DGEPL 157 (424)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98653
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.90 E-value=0.092 Score=54.50 Aligned_cols=95 Identities=16% Similarity=0.102 Sum_probs=43.4
Q ss_pred EEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCCc--cCCCcEEEcc
Q 006747 67 VLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSSL--SPQLNWVDLS 144 (632)
Q Consensus 67 v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~~L~~L~Ls 144 (632)
+..+.++..- + .|....+.++..|+.+.+..|... .....|.++..|+.+.+..+.+.. ..+ ..+|+.+.+.
T Consensus 232 l~~i~ip~~~-~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~---~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 232 VKNIIIPDSF-T-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE---KTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCEEEECTTC-C-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT---TTTTTCTTCCEEEEC
T ss_pred CceEEECCCc-e-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc---ccccccccccccccc
Confidence 4445554332 1 344445666677777776665443 233445555555555544433210 011 1344444444
Q ss_pred CCCCcccCCccccCCCCccceecc
Q 006747 145 FNSITGNIPASIRNLSHLVGLNLQ 168 (632)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~l~l~ 168 (632)
.| ++..-..+|.++++|+.++|.
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCC
T ss_pred cc-cceechhhhcCCCCCCEEEeC
Confidence 33 332233344455555555443
No 445
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.58 E-value=0.016 Score=37.78 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=21.4
Q ss_pred ccccccceeeehhhHHHHHHHHHHHHHhhhhc
Q 006747 254 EKLSTGAIVAIAIGGSAVLFLLFLMIAFCCLK 285 (632)
Q Consensus 254 ~~~s~~~ii~ivi~~~~~v~l~~~~i~~~~~~ 285 (632)
+.++.+++.+++++.++.+.+++.+++|+++|
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 34677888888888777666655555555443
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.51 E-value=0.095 Score=53.98 Aligned_cols=132 Identities=15% Similarity=0.211 Sum_probs=91.4
Q ss_pred EEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCCCC-cc--CCCcEEEc
Q 006747 67 VLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIPSS-LS--PQLNWVDL 143 (632)
Q Consensus 67 v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~--~~L~~L~L 143 (632)
+..+.++.. +. .+....+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++ .++.. |. .+|+.+++
T Consensus 219 l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 219 LKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp CSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEE
T ss_pred cceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccc
Confidence 444555433 22 455667888999999999876 55344667889999999999654 55 44433 32 68999999
Q ss_pred cCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccCCCCCCCcccccCCCCCCccCC
Q 006747 144 SFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYNHLNGSVPLALQKFPPSSFEGN 213 (632)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n 213 (632)
.+|.++..-..+|.+|.+|+.+.|..| ++..-.. | ++.+|+.+.+ |..+..+...+|.+.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i---------p~~v~~I~~~aF~~c 355 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY---------PKSITLIESGAFEGS 355 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC---------CTTCCEECTTTTTTS
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE---------CCccCEEchhHhhCC
Confidence 999998666789999999999999765 5533232 3 6778887755 444445555666553
No 447
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.88 E-value=0.085 Score=54.77 Aligned_cols=118 Identities=18% Similarity=0.181 Sum_probs=86.2
Q ss_pred eEEEEEeCCCCcccccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCcCCccCC-CCcc--CCCcEEE
Q 006747 66 RVLAVRLPGVGLYGPIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNNFSGNIP-SSLS--PQLNWVD 142 (632)
Q Consensus 66 ~v~~l~l~~~~l~g~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~--~~L~~L~ 142 (632)
.+..+.++.+.. .+....+..+..|+.+.+..+.+. ...|..+.+|+.+.+.++ ++ .|+ ..|. .+|+.++
T Consensus 254 ~l~~~~~~~~~~--~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~ 326 (394)
T 4fs7_A 254 DLESISIQNNKL--RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSID 326 (394)
T ss_dssp SCCEEEECCTTC--EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEEC
T ss_pred cceeEEcCCCcc--eeeccccccccccceeccCceeec---cccccccccccccccccc-cc-eechhhhcCCCCCCEEE
Confidence 455566665543 366667889999999988877643 346788999999999765 55 343 3443 6899999
Q ss_pred ccCCCCcccCCccccCCCCccceecccccccccCCC-C-CCCCCcEEEcccC
Q 006747 143 LSFNSITGNIPASIRNLSHLVGLNLQNNSLTGFIPN-F-NLSRLRHLNLSYN 192 (632)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~-~~~~L~~l~ls~N 192 (632)
|..+ ++..-..+|.+|++|+.++|..| ++..-.. | .+.+|+.+++..|
T Consensus 327 lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 327 LPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred eCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 9755 76555678999999999999877 6544333 3 7889999998765
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.59 E-value=0.071 Score=35.73 Aligned_cols=31 Identities=29% Similarity=0.273 Sum_probs=16.4
Q ss_pred cceeeehhhHHHHHHHHHHHHHhhhhccCCC
Q 006747 259 GAIVAIAIGGSAVLFLLFLMIAFCCLKKKDS 289 (632)
Q Consensus 259 ~~ii~ivi~~~~~v~l~~~~i~~~~~~~~~~ 289 (632)
++|.+.+++++++++++++.++++++||+.+
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4455556665555555555455555554443
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=92.52 E-value=0.1 Score=35.10 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=15.2
Q ss_pred cceeeehhhHHHHHHHHHHHHHhhhhccCC
Q 006747 259 GAIVAIAIGGSAVLFLLFLMIAFCCLKKKD 288 (632)
Q Consensus 259 ~~ii~ivi~~~~~v~l~~~~i~~~~~~~~~ 288 (632)
++|.+.++++++++++++++++++++||+.
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 345555555555555445444445554443
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.68 E-value=0.58 Score=48.57 Aligned_cols=28 Identities=25% Similarity=0.421 Sum_probs=23.8
Q ss_pred ceecCCCCCCeee------cCCCCeEEcccCCCC
Q 006747 461 FILGNIKSSNVLL------SQDLQGCISDFGLTP 488 (632)
Q Consensus 461 ivHrDlk~~NILl------~~~~~~ki~DfGla~ 488 (632)
++|+|+.+.||++ +++..++++||..|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456789999998763
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.97 E-value=1.9 Score=40.13 Aligned_cols=123 Identities=10% Similarity=0.095 Sum_probs=81.1
Q ss_pred HHHHHHhhcCCCCccceeEEEEeCCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCC
Q 006747 381 QMEVVGRLSQHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIAHIHAAVGGK 460 (632)
Q Consensus 381 e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ 460 (632)
|+.+|.. .||+.+.. ..-.+.+.+.+.|+.-+.+-=...++ .++...+++++..++.-..+++.
T Consensus 36 el~LL~~--~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~----- 99 (215)
T 4ann_A 36 LMYLLEQ--HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT----- 99 (215)
T ss_dssp GGGGGGS--CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----
T ss_pred HHHHHhc--cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----
Confidence 3444443 68888876 45555666666666544222222232 25678899999988877766553
Q ss_pred ceecCCCCCCeeecCCCCeEEcccCCCCCCCCCCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCC
Q 006747 461 FILGNIKSSNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQ 537 (632)
Q Consensus 461 ivHrDlk~~NILl~~~~~~ki~DfGla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~ 537 (632)
-+|--|.|+||++|.++.+++.=.|+-..+ +|. ..++..=.-.+=+++..+++++..|+
T Consensus 100 r~tf~L~P~NL~f~~~~~p~i~~RGik~~l-------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 100 RYTFVLAPDELFFTRDGLPIAKTRGLQNVV-------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp SEECCCSGGGEEECTTSCEEESCCEETTTB-------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred ceEEEEecceEEEcCCCCEEEEEccCccCC-------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 377889999999999999999888864322 221 11233334467888999999998885
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.59 E-value=0.71 Score=30.87 Aligned_cols=26 Identities=12% Similarity=0.342 Sum_probs=11.0
Q ss_pred eeeehhhHHHHHHHHHHHHHhhhhccC
Q 006747 261 IVAIAIGGSAVLFLLFLMIAFCCLKKK 287 (632)
Q Consensus 261 ii~ivi~~~~~v~l~~~~i~~~~~~~~ 287 (632)
++++++| +++++++.++++++.+||+
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 4555555 3333333333344444443
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.84 E-value=6 Score=36.90 Aligned_cols=115 Identities=14% Similarity=0.158 Sum_probs=75.9
Q ss_pred CCCCccceeEEEEeCCceEEEEecccCCCHhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHH-HHHhccCCCceecCCCC
Q 006747 390 QHPNVVPIRAYYFSKDEKLLVYDFIEAGSFSALLHGNRGIGRTPLDWESRVKISLGSAKGIA-HIHAAVGGKFILGNIKS 468 (632)
Q Consensus 390 ~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivHrDlk~ 468 (632)
.||+. -...-.+.+.+.+.|+.-+++.=...++. ++...+++++..++.-.. +++ .-+|--|.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~--------~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK--------TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT--------SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh--------cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeC
Confidence 68877 33344566777777776544433333432 566788888887776555 444 457888999
Q ss_pred CCeeecCCCCeEEcccCCCCCCCCCCCCCCCCcccCCccccCCCCCccchhhHHHHHHHHHHhCCCCCC
Q 006747 469 SNVLLSQDLQGCISDFGLTPLMNTPTVPSRSAGYRAPEVIETKKPTQKSDVYSFGVLLLEMLTGKAPIQ 537 (632)
Q Consensus 469 ~NILl~~~~~~ki~DfGla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DV~s~Gvvl~elltg~~p~~ 537 (632)
+||++|.++.++|.-.|+-.. ++|.- .++.-=.-.+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~-------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES-------------LPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT-------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCccc-------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999998887432 23322 1222234467788888888888774
No 454
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=66.31 E-value=6.8 Score=28.36 Aligned_cols=21 Identities=33% Similarity=0.515 Sum_probs=12.4
Q ss_pred ehhhHHHHHHHHHHHHHhhhh
Q 006747 264 IAIGGSAVLFLLFLMIAFCCL 284 (632)
Q Consensus 264 ivi~~~~~v~l~~~~i~~~~~ 284 (632)
|++|+++.+++++.+.+||+.
T Consensus 12 ivlGg~~~lll~~glcI~ccv 32 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSV 32 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHhh
Confidence 567766666665555555433
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=64.16 E-value=0.79 Score=48.56 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=16.9
Q ss_pred hHhCccceeEEEEEEEcC-CcEEEE------EEecccccC---HHHHHHHHHHHHhhcCCCCccceeEEEEe
Q 006747 342 EVLGKGSYGTTYKAILEE-GTTVVV------KRLKEVVMG---KREFEQQMEVVGRLSQHPNVVPIRAYYFS 403 (632)
Q Consensus 342 ~~lg~G~fg~V~~~~~~~-~~~vav------K~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~ 403 (632)
+.|| ||.||+|.+.. ..+||| |..+..... ...+.++..++... +|+|+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcceEEe
Confidence 3455 99999999754 367888 766543222 24577777887777 89999999887653
No 456
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=53.76 E-value=5.2 Score=24.94 Aligned_cols=25 Identities=24% Similarity=0.473 Sum_probs=15.5
Q ss_pred ccccceeeehhhHHHHHHHHHHHHH
Q 006747 256 LSTGAIVAIAIGGSAVLFLLFLMIA 280 (632)
Q Consensus 256 ~s~~~ii~ivi~~~~~v~l~~~~i~ 280 (632)
.+.+++.+++++.++..+++.+.++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~vy 28 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALAVY 28 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHHHh
Confidence 4556777888877666554444443
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=46.36 E-value=1.2e+02 Score=32.83 Aligned_cols=85 Identities=18% Similarity=0.123 Sum_probs=49.3
Q ss_pred ceeEEEEeCCceEEEEecccCCCHhhhhcc----------CCCCCCCc--CCHHHHHHHHHHHHH--HHHHHHhccCCCc
Q 006747 396 PIRAYYFSKDEKLLVYDFIEAGSFSALLHG----------NRGIGRTP--LDWESRVKISLGSAK--GIAHIHAAVGGKF 461 (632)
Q Consensus 396 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~----------~~~~~~~~--l~~~~~~~i~~~ia~--~l~~LH~~~~~~i 461 (632)
+.+.+....... =+.|++++.++.+++.. .......+ ..|..+..+...+|- -+.|+= +|
T Consensus 403 ~~Y~Vipls~~~-GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL-----Gi 476 (614)
T 3ls8_A 403 TPYKVLATSTKH-GFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL-----GV 476 (614)
T ss_dssp CCCCEEESSSSE-EEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH-----TC
T ss_pred eccEEEEecCCC-ceEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee-----ec
Confidence 344444444433 34577776555554432 11111111 235566666555542 345543 22
Q ss_pred eecCCCCCCeeecCCCCeEEcccCCCC
Q 006747 462 ILGNIKSSNVLLSQDLQGCISDFGLTP 488 (632)
Q Consensus 462 vHrDlk~~NILl~~~~~~ki~DfGla~ 488 (632)
+|=.++|||+|.+|++-=+|||..-
T Consensus 477 --gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 --GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --cCCCCcceeEcCCCCEeeeehHHhh
Confidence 6778899999999999999999873
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=35.36 E-value=6.2 Score=24.89 Aligned_cols=7 Identities=0% Similarity=0.107 Sum_probs=2.7
Q ss_pred Hhhhhcc
Q 006747 280 AFCCLKK 286 (632)
Q Consensus 280 ~~~~~~~ 286 (632)
.++.+||
T Consensus 28 ~~~iRRr 34 (35)
T 1iij_A 28 GILIKRR 34 (35)
T ss_dssp THHHHHC
T ss_pred heEEeec
Confidence 3344433
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.37 E-value=68 Score=25.45 Aligned_cols=45 Identities=9% Similarity=0.078 Sum_probs=33.7
Q ss_pred ccCchhhcCCCCCcEEeccCCccCCCCCccccCCCCCCeEeecCCc
Q 006747 80 PIPANTLEKLDSLMILSLRSNHLSGDLPSNVLSLSSLRFLYLQNNN 125 (632)
Q Consensus 80 ~lp~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 125 (632)
.|....|.++++|+.+.|..+ ++..-...|.++.+|+.+.+....
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 466668889999999998875 443445688899999998886543
No 460
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=21.67 E-value=54 Score=20.98 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=15.0
Q ss_pred ceeeehhhHHHHHHHHHHHHHhhhhc
Q 006747 260 AIVAIAIGGSAVLFLLFLMIAFCCLK 285 (632)
Q Consensus 260 ~ii~ivi~~~~~v~l~~~~i~~~~~~ 285 (632)
.++.++.+..++++-..+++.++.+|
T Consensus 11 ~i~lII~~vmaGiIG~IllI~y~I~r 36 (40)
T 1afo_A 11 EITLIIFGVMAGVIGTILLISYGIRR 36 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666655555555556666554
No 461
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=25.46 E-value=22 Score=23.37 Aligned_cols=18 Identities=28% Similarity=0.678 Sum_probs=10.3
Q ss_pred cccceeeehhhHHHHHHH
Q 006747 257 STGAIVAIAIGGSAVLFL 274 (632)
Q Consensus 257 s~~~ii~ivi~~~~~v~l 274 (632)
+.+++++..++++++..+
T Consensus 15 srga~iGL~v~gVai~~v 32 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATV 32 (43)
Confidence 446677766665554433
Done!