BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006750
(632 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 177/303 (58%), Gaps = 14/303 (4%)
Query: 210 GTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVF 269
G + RFS L+ A+D FS NI+G+GG VY+G+L DG +VAVKR K + + F
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQF 82
Query: 270 LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG--MNW 327
TEV+M+S H +++ L G+C RLLV+ +M NG++ CL ++W
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCM----TPTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 328 DTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387
R IA+G+ARGL YLH+ P+I+HRD+K++NILLDE A + D G+AK +
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 198
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL 447
+ ++GT G+ APEY G++S +DVF +GV+LLELITG++ + ++ +
Sbjct: 199 VXXA----VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
Query: 448 VL--WATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+L W L++ + L D L+G++ EE++ + +A C Q P RP MSEVV+
Sbjct: 255 MLLDWVKGLLKEKK--LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 312
Query: 506 ILS 508
+L
Sbjct: 313 MLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 175/303 (57%), Gaps = 14/303 (4%)
Query: 210 GTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVF 269
G + RFS L+ A+D F NI+G+GG VY+G+L DG +VAVKR K + + F
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 270 LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG--MNW 327
TEV+M+S H +++ L G+C RLLV+ +M NG++ CL ++W
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCM----TPTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 328 DTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387
R IA+G+ARGL YLH+ P+I+HRD+K++NILLDE A + D G+AK +
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL 447
+ ++G G+ APEY G++S +DVF +GV+LLELITG++ + ++ +
Sbjct: 191 VXXA----VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 448 VL--WATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+L W L++ + L D L+G++ EE++ + +A C Q P RP MSEVV+
Sbjct: 247 MLLDWVKGLLKEKK--LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304
Query: 506 ILS 508
+L
Sbjct: 305 MLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 161/287 (56%), Gaps = 15/287 (5%)
Query: 220 LEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
LE AT+ F ++G G VY+G L DG VA+KR +T F TE++ LS
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSFC 92
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDG--VLVEGMNWDTRVAIAIGA 337
H H+V L+G+C E R +L++++M NGNL+ L G + M+W+ R+ I IGA
Sbjct: 93 RHPHLVSLIGFCDE----RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
ARGL YLH A I+HRD+KS NILLDEN KITD G++K+ G ++
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV---VK 202
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT GY PEY + GR + SDV+SFGVVL E++ R I +S+ + +L WA +
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HN 261
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+G + ++ DP L E ++ A +CL L + RP+M +V+
Sbjct: 262 NGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 161/287 (56%), Gaps = 15/287 (5%)
Query: 220 LEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
LE AT+ F ++G G VY+G L DG VA+KR +T F TE++ LS
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSFC 92
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDG--VLVEGMNWDTRVAIAIGA 337
H H+V L+G+C E R +L++++M NGNL+ L G + M+W+ R+ I IGA
Sbjct: 93 RHPHLVSLIGFCDE----RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
ARGL YLH A I+HRD+KS NILLDEN KITD G++K K L ++
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXV-VK 202
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT GY PEY + GR + SDV+SFGVVL E++ R I +S+ + +L WA +
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HN 261
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+G + ++ DP L E ++ A +CL L + RP+M +V+
Sbjct: 262 NGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 165/310 (53%), Gaps = 34/310 (10%)
Query: 215 FSYSALEHATDKFS------GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV 268
FS+ L++ T+ F G N +G+GG VY+G + + VAVK+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 269 ---FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRD---CLDGVLV 322
F E+ ++++ H ++V L+G+ S+ LV+ +MPNG+L D CLDG
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDD----LCLVYVYMPNGSLLDRLSCLDGT-- 127
Query: 323 EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382
++W R IA GAA G+ +LHE +HRDIKS+NILLDE AKI+D G+A +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA---R 181
Query: 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI--HRSI 440
A + + +R+ GT Y APE A+ G + SD++SFGVVLLE+ITG + HR
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-- 238
Query: 441 TKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500
E L+L ++D I + D ++ D ++ M +A +CL + RP +
Sbjct: 239 ---EPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 501 SEVVQILSTI 510
+V Q+L +
Sbjct: 295 KKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 164/310 (52%), Gaps = 34/310 (10%)
Query: 215 FSYSALEHATDKFS------GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV 268
FS+ L++ T+ F G N +G+GG VY+G + + VAVK+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 269 ---FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRD---CLDGVLV 322
F E+ ++++ H ++V L+G+ S+ LV+ +MPNG+L D CLDG
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDD----LCLVYVYMPNGSLLDRLSCLDGT-- 127
Query: 323 EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382
++W R IA GAA G+ +LHE +HRDIKS+NILLDE AKI+D G+A +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA---R 181
Query: 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI--HRSI 440
A + + R+ GT Y APE A+ G + SD++SFGVVLLE+ITG + HR
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-- 238
Query: 441 TKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500
E L+L ++D I + D ++ D ++ M +A +CL + RP +
Sbjct: 239 ---EPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 501 SEVVQILSTI 510
+V Q+L +
Sbjct: 295 KKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 163/310 (52%), Gaps = 34/310 (10%)
Query: 215 FSYSALEHATDKFS------GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV 268
FS+ L++ T+ F G N +G+GG VY+G + + VAVK+ + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 269 ---FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRD---CLDGVLV 322
F E+ ++++ H ++V L+G+ S+ LV+ +MPNG+L D CLDG
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDD----LCLVYVYMPNGSLLDRLSCLDGT-- 121
Query: 323 EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382
++W R IA GAA G+ +LHE +HRDIKS+NILLDE AKI+D G+A +
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA---R 175
Query: 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI--HRSI 440
A + R+ GT Y APE A+ G + SD++SFGVVLLE+ITG + HR
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-- 232
Query: 441 TKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500
E L+L ++D I + D ++ D ++ M +A +CL + RP +
Sbjct: 233 ---EPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDI 288
Query: 501 SEVVQILSTI 510
+V Q+L +
Sbjct: 289 KKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 158/307 (51%), Gaps = 34/307 (11%)
Query: 215 FSYSALEHATDKFS------GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV 268
FS+ L++ T+ F G N G+GG VY+G + + VAVK+ + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 269 ---FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRD---CLDGVLV 322
F E+ + ++ H ++V L+G+ S+ LV+ + PNG+L D CLDG
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDD----LCLVYVYXPNGSLLDRLSCLDGT-- 118
Query: 323 EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382
++W R IA GAA G+ +LHE +HRDIKS+NILLDE AKI+D G+A +
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA---R 172
Query: 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI--HRSI 440
A + +R+ GT Y APE A+ G + SD++SFGVVLLE+ITG + HR
Sbjct: 173 ASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-- 229
Query: 441 TKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500
E L+L ++D I + D + D ++ +A +CL + RP +
Sbjct: 230 ---EPQLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDI 285
Query: 501 SEVVQIL 507
+V Q+L
Sbjct: 286 KKVQQLL 292
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 130/292 (44%), Gaps = 47/292 (16%)
Query: 232 IVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNAD-----SVFLTEVDMLSRLHHCHVVP 286
I+G GG VYR G VAVK + P+ D E + + L H +++
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVK--AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE 346
L G C K LV EF G L L G + D V A+ ARG+ YLH+
Sbjct: 71 LRGVCL----KEPNLCLVMEFARGGPLNRVLSGKRIPP---DILVNWAVQIARGMNYLHD 123
Query: 347 AAAPRILHRDIKSSNILLDENLN--------AKITDLGMAKRLKADGLPSCSSSPARMQG 398
A I+HRD+KSSNIL+ + + KITD G+A+ ++ G
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-------RTTKMSAAG 176
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458
+ + APE S SDV+S+GV+L EL+TG P +G + L +
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-----RGIDGLAV-------AY 224
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
G +++L P P + A L ++C DP +RP+ + ++ L+TI
Sbjct: 225 GVAMNKLALP-----IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK K GP S + E+D+L L+H H++ G C E +G+++++ LV E++
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDQGEKSLQ-LVMEYV 100
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P G+LRD L + + A G+ YLH A +HR++ + N+LLD +
Sbjct: 101 PLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDR 154
Query: 369 NAKITDLGMAK---------RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDV 419
KI D G+AK R++ DG SP ++APE + SDV
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDG-----DSPVF------WYAPECLKEYKFYYASDV 203
Query: 420 FSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEM 479
+SFGV L EL+T TK L L + Q + ++EL + + P +
Sbjct: 204 WSFGVTLYELLTHCDSSQSPPTK---FLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 260
Query: 480 QIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ +L K C + + RPT ++ IL T+
Sbjct: 261 CEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 126/271 (46%), Gaps = 31/271 (11%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK K GP S + E+D+L L+H H++ G C E G +++ LV E++
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDAGAASLQ-LVMEYV 117
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P G+LRD L + + A G+ YLH A +HRD+ + N+LLD +
Sbjct: 118 PLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDR 171
Query: 369 NAKITDLGMAK---------RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDV 419
KI D G+AK R++ DG SP ++APE + SDV
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDG-----DSPVF------WYAPECLKEYKFYYASDV 220
Query: 420 FSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEM 479
+SFGV L EL+T TK L L + Q + ++EL + + P +
Sbjct: 221 WSFGVTLYELLTHCDSSQSPPTK---FLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 277
Query: 480 QIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ +L K C + + RPT ++ IL T+
Sbjct: 278 AEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK K GP S + E+D+L L+H H++ G C E +G+++++ LV E++
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDQGEKSLQ-LVMEYV 100
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P G+LRD L + + A G+ YLH + +HR++ + N+LLD +
Sbjct: 101 PLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDR 154
Query: 369 NAKITDLGMAK---------RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDV 419
KI D G+AK R++ DG SP ++APE + SDV
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDG-----DSPVF------WYAPECLKEYKFYYASDV 203
Query: 420 FSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEM 479
+SFGV L EL+T TK L L + Q + ++EL + + P +
Sbjct: 204 WSFGVTLYELLTHCDSSQSPPTK---FLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 260
Query: 480 QIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ +L K C + + RPT ++ IL T+
Sbjct: 261 CEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 84 E-----EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 189
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 228
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 84 E-----EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEXTARQGAKFPIKWTAPEAALY 189
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 228
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 24/289 (8%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
D + ++G G ++ V + VA+KR + + L E+ +S+ HH +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG------MNWDTRVAIAIGA 337
+V Y + F K + LV + + G++ D + ++ +G ++ T I
Sbjct: 75 IV---SYYTSFVVKDEL-WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
GLEYLH+ +HRD+K+ NILL E+ + +I D G++ L G + +
Sbjct: 131 LEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 398 GTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT + APE R +D++SFG+ +EL TG P H+ L L P
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
++G + D + + K ++++ CLQ DP+ RPT +E+++
Sbjct: 248 ETG-----VQDKEMLKKYGKSFRKMISL----CLQKDPEKRPTAAELLR 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 24/289 (8%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
D + ++G G ++ V + VA+KR + + L E+ +S+ HH +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG------MNWDTRVAIAIGA 337
+V Y + F K + LV + + G++ D + ++ +G ++ T I
Sbjct: 70 IV---SYYTSFVVKDEL-WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
GLEYLH+ +HRD+K+ NILL E+ + +I D G++ L G + +
Sbjct: 126 LEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 398 GTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT + APE R +D++SFG+ +EL TG P H+ L L P
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
++G + D + + K ++++ CLQ DP+ RPT +E+++
Sbjct: 243 ETG-----VQDKEMLKKYGKSFRKMISL----CLQKDPEKRPTAAELLR 282
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 129/273 (47%), Gaps = 37/273 (13%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK K GP S + E+++L L+H H+V G C E +G+++++ LV E++
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG-CCEDQGEKSVQ-LVMEYV 95
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P G+LRD L V G+ + A G+ YLH A +HR + + N+LLD +
Sbjct: 96 PLGSLRDYLPRHCV-GLA--QLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDR 149
Query: 369 NAKITDLGMAK---------RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDV 419
KI D G+AK R++ DG SP ++APE + SDV
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDG-----DSPVF------WYAPECLKECKFYYASDV 198
Query: 420 FSFGVVLLELIT---GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
+SFGV L EL+T Q H T+ L + Q + ++EL + + P
Sbjct: 199 WSFGVTLYELLTYCDSNQSPHTKFTE------LIGHTQGQMTVLRLTELLERGERLPRPD 252
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509
+ +L K C + + RPT +V IL T
Sbjct: 253 RCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 75 E-----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 126
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 180
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 181 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 219
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 220 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 73 E-----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 124
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 178
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 179 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 217
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 218 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 84 E-----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 189
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 228
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 129/273 (47%), Gaps = 37/273 (13%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK K GP S + E+++L L+H H+V G C E +G+++++ LV E++
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG-CCEDQGEKSVQ-LVMEYV 94
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P G+LRD L V G+ + A G+ YLH A +HR + + N+LLD +
Sbjct: 95 PLGSLRDYLPRHCV-GLA--QLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDR 148
Query: 369 NAKITDLGMAK---------RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDV 419
KI D G+AK R++ DG SP ++APE + SDV
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDG-----DSPVF------WYAPECLKECKFYYASDV 197
Query: 420 FSFGVVLLELIT---GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
+SFGV L EL+T Q H T+ L + Q + ++EL + + P
Sbjct: 198 WSFGVTLYELLTYCDSNQSPHTKFTE------LIGHTQGQMTVLRLTELLERGERLPRPD 251
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509
+ +L K C + + RPT +V IL T
Sbjct: 252 RCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 84 E-----EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 189
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 228
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 125/281 (44%), Gaps = 43/281 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 251 E-----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 302
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+ RL D + AR F + APE A+
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLG-RLIED-----NEYTARQGAKFPIKWTAPEAALY 356
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 357 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 395
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
+G P E + + L +C + DP+ RPT + L
Sbjct: 396 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 436
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 125/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G L D L G + + + V +A A G+ Y+
Sbjct: 84 E-----EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 189
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 228
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + V +A A G+ Y+
Sbjct: 250 E-----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 355
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQP 435
GR ++ SDV+SFG++L EL T GR P
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + V +A A G+ Y+
Sbjct: 250 E-----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 355
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQP 435
GR ++ SDV+SFG++L EL T GR P
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 126/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ ++ H +V L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 84 E-----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 189
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 228
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + V +A A G+ Y+
Sbjct: 250 E-----EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 355
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQP 435
GR ++ SDV+SFG++L EL T GR P
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + V +A A G+ Y+
Sbjct: 333 E-----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 384
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 438
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQP 435
GR ++ SDV+SFG++L EL T GR P
Sbjct: 439 GRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 125/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + + V +A A G+ Y+
Sbjct: 84 E-----EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD+ ++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 189
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 228
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 125/282 (44%), Gaps = 43/282 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G L D L G + + + V +A A G+ Y+
Sbjct: 84 E-----EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 189
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
GR ++ SDV+SFG++L EL T GR P G V E+ D
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPY---------------------PGMVNREVLDQV 228
Query: 470 LKG---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+G P E + + L +C + DP+ RPT + L
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + V +A A G+ Y+
Sbjct: 77 E-----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 128
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 182
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQP 435
GR ++ SDV+SFG++L EL T GR P
Sbjct: 183 GRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + V +A A G+ Y+
Sbjct: 74 E-----EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 125
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEXTARQGAKFPIKWTAPEAALY 179
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQP 435
GR ++ SDV+SFG++L EL T GR P
Sbjct: 180 GRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCHVVPLVGY 290
+G G V+R + G VAVK Q +A+ V FL EV ++ RL H ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLV-EGMNWDTRVAIAIGAARGLEYLHEAAA 349
++ +V E++ G+L L E ++ R+++A A+G+ YLH
Sbjct: 103 VTQPPNLS----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
P I+HR++KS N+L+D+ K+ D G++ RLKA S S+ GT + APE
Sbjct: 159 P-IVHRNLKSPNLLVDKKYTVKVCDFGLS-RLKASTFLSSKSA----AGTPEWMAPEVLR 212
Query: 410 VGRASLMSDVFSFGVVLLELITGRQP 435
++ SDV+SFGV+L EL T +QP
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 76 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 126
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 233
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 234 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 79 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 129
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 236
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 237 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 276
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 94 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 144
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATE---KSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 251
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 252 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 291
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 101 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 151
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 258
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 259 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 298
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 79 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 129
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 236
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 237 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 276
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 74 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 231
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 232 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 271
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 74 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATE---KSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 231
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 232 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 271
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 48/287 (16%)
Query: 232 IVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+VG+G V + + + VA+K+ +++ A F+ E+ LSR++H ++V L G C
Sbjct: 15 VVGRGAFGVVCKAKWR-AKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGAC 70
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGV-------LVEGMNWDTRVAIAIGAARGLEYL 344
LV E+ G+L + L G M+W + ++G+ YL
Sbjct: 71 LN------PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYL 118
Query: 345 HEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
H ++HRD+K N+LL KI D G A ++ + +G+ +
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--------THMTNNKGSAAWM 170
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
APE S DVFS+G++L E+IT R+P G ++WA +GT
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE--IGGPAFRIMWAV----HNGT--- 221
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
P L + PK +M C DP RP+M E+V+I++ +
Sbjct: 222 ---RPPLIKNLPKPIESLMT----RCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 102 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 152
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 259
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 260 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 299
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 102 T-----KPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 152
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATE---KSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 259
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 260 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 299
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 48/287 (16%)
Query: 232 IVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+VG+G V + + + VA+K+ +++ A F+ E+ LSR++H ++V L G C
Sbjct: 16 VVGRGAFGVVCKAKWR-AKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGAC 71
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGV-------LVEGMNWDTRVAIAIGAARGLEYL 344
LV E+ G+L + L G M+W + ++G+ YL
Sbjct: 72 LN------PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYL 119
Query: 345 HEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
H ++HRD+K N+LL KI D G A ++ + +G+ +
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--------THMTNNKGSAAWM 171
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
APE S DVFS+G++L E+IT R+P G ++WA +GT
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE--IGGPAFRIMWAV----HNGT--- 222
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
P L + PK +M C DP RP+M E+V+I++ +
Sbjct: 223 ---RPPLIKNLPKPIESLMT----RCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + V ++ A G+ Y+
Sbjct: 81 E-----EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ ENL K+ D G+A+ ++ + + + ++ T APE A+ GR
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT----APEAALYGR 188
Query: 413 ASLMSDVFSFGVVLLELIT-GRQP 435
++ SDV+SFG++L EL T GR P
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVP 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+GQG V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L G + + V ++ A G+ Y+
Sbjct: 81 E-----EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ ENL K+ D G+A RL D + AR F + APE A+
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLA-RLIED-----NEYTARQGAKFPIKWTAPEAALY 186
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQP 435
GR ++ SDV+SFG++L EL T GR P
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L + + IA ARG++YLH A
Sbjct: 78 T-----KPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLH---AKS 128
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
I+HRD+KS+NI L E+ KI D G+A S S ++ G+ + APE +
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 412 RA---SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
+ S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLS---------PDL 235
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP+ ++ + +A
Sbjct: 236 SKVRSNCPKRMKRLMA----ECLKKKRDERPSFPRILAEIEELA 275
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G VAVK K + G N + E+++L L+H ++V G C+E G ++ L+ EF+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE-DGGNGIK-LIMEFL 107
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P+G+L++ L +N ++ A+ +G++YL + + +HRD+ + N+L++
Sbjct: 108 PSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEH 163
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
KI D G+ K ++ D + R F ++APE M + + SDV+SFGV L E
Sbjct: 164 QVKIGDFGLTKAIETDK-EXXTVKDDRDSPVF-WYAPECLMQSKFYIASDVWSFGVTLHE 221
Query: 429 LIT 431
L+T
Sbjct: 222 LLT 224
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L + + IA ARG++YLH A
Sbjct: 90 T-----KPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLH---AKS 140
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
I+HRD+KS+NI L E+ KI D G+A S S ++ G+ + APE +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATE---KSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 412 RA---SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
+ S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLS---------PDL 247
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP+ ++ + +A
Sbjct: 248 SKVRSNCPKRMKRLMA----ECLKKKRDERPSFPRILAEIEELA 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 15/206 (7%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCHVVPLVGY 290
+G G V+R + G VAVK Q +A+ V FL EV ++ RL H ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLV-EGMNWDTRVAIAIGAARGLEYLHEAAA 349
++ +V E++ G+L L E ++ R+++A A+G+ YLH
Sbjct: 103 VTQPPNLS----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
P I+HRD+KS N+L+D+ K+ D G++ RLKA + GT + APE
Sbjct: 159 P-IVHRDLKSPNLLVDKKYTVKVCDFGLS-RLKASXFLXSKXA----AGTPEWMAPEVLR 212
Query: 410 VGRASLMSDVFSFGVVLLELITGRQP 435
++ SDV+SFGV+L EL T +QP
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G VAVK K + G N + E+++L L+H ++V G C+E G ++ L+ EF+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE-DGGNGIK-LIMEFL 95
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P+G+L++ L +N ++ A+ +G++YL + + +HRD+ + N+L++
Sbjct: 96 PSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEH 151
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
KI D G+ K ++ D + R F ++APE M + + SDV+SFGV L E
Sbjct: 152 QVKIGDFGLTKAIETDK-EXXTVKDDRDSPVF-WYAPECLMQSKFYIASDVWSFGVTLHE 209
Query: 429 LIT 431
L+T
Sbjct: 210 LLT 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 33/284 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ +V ++ +L L ++ + IA A+G++YLH A
Sbjct: 74 TA-----PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E+L KI D G+A S S ++ G+ + APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD- 467
S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIFMVGRGYLS---------PDL 231
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP +++ + +A
Sbjct: 232 SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELLA 271
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 35/285 (12%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFK-TQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK T P F EV +L + H +++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 292 SEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
+ A +L +V ++ +L L + + IA ARG++YLH A
Sbjct: 90 T------APQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLH---AK 139
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
I+HRD+KS+NI L E+ KI D G+A S S ++ G+ + APE +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATE---KSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 411 GRA---SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467
+ S SDV++FG+VL EL+TG+ P + +I ++ + + L PD
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLS---------PD 246
Query: 468 -PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+++ + PK ++MA ECL+ D RP+ ++ + +A
Sbjct: 247 LSKVRSNCPKRMKRLMA----ECLKKKRDERPSFPRILAEIEELA 287
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 135/284 (47%), Gaps = 41/284 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G + VA+K + G ++ F+ E +++ +L H +V L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLD---GVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
E +A LVFEFM +G L D L G+ +T + + + G+ YL EA+
Sbjct: 73 E----QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAS- 123
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
++HRD+ + N L+ EN K++D GM + + D S + + ++ + +PE
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WASPEVFS 177
Query: 410 VGRASLMSDVFSFGVVLLELIT-GRQPI-HRSITKGEESLVLWATPRLQDSGTVISELPD 467
R S SDV+SFGV++ E+ + G+ P +RS ++ E + + L
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI------------STGFRLYK 225
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
PRL QIM + C + P+ RP S +++ L+ IA
Sbjct: 226 PRLAS---THVYQIMNH----CWKERPEDRPAFSRLLRQLAAIA 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 37/282 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G + VA+K + G ++ F+ E +++ +L H +V L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLD---GVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
E +A LVFEFM +G L D L G+ +T + + + G+ YL EA
Sbjct: 73 E----QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC- 123
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
++HRD+ + N L+ EN K++D GM + + D S + + ++ + +PE
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WASPEVFS 177
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S SDV+SFGV++ E+ + + + + + E ++D T L PR
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGF-RLYKPR 227
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
L QIM + KE P+ RP S +++ L+ IA
Sbjct: 228 LAS---THVYQIMNHCWKE----RPEDRPAFSRLLRQLAEIA 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 38 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 94
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 95 MEYLPYGSLRDYLQA-HAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 150
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 208
Query: 425 VLLELIT 431
VL EL T
Sbjct: 209 VLYELFT 215
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 35/282 (12%)
Query: 233 VGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G V+ G+L D +VAVK + P+ + FL E +L + H ++V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG--MNWDTRVAIAIGAARGLEYLHEAAA 349
++ + +V E + G D L + EG + T + + AA G+EYL
Sbjct: 182 TQ----KQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
+HRD+ + N L+ E KI+D GM+ R +ADG+ + S Q + APE
Sbjct: 235 ---IHRDLAARNCLVTEKNVLKISDFGMS-REEADGVXAASG--GLRQVPVKWTAPEALN 288
Query: 410 VGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDP 468
GR S SDV+SFG++L E + G P + V + G LP P
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV--------EKG---GRLPCP 337
Query: 469 RLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L D + L ++C +P RP+ S + Q L +I
Sbjct: 338 ELCPD-------AVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 37/282 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G + VA+K + G ++ F+ E +++ +L H +V L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLD---GVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
E +A LVFEFM +G L D L G+ +T + + + G+ YL EA
Sbjct: 71 E----QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC- 121
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
++HRD+ + N L+ EN K++D GM + + D S + + ++ + +PE
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WASPEVFS 175
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S SDV+SFGV++ E+ + + + + + E ++D T L PR
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGF-RLYKPR 225
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
L QIM + KE P+ RP S +++ L+ IA
Sbjct: 226 LAS---THVYQIMNHCWKE----RPEDRPAFSRLLRQLAEIA 260
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 41/284 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G + VA+K + G ++ F+ E +++ +L H +V L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLD---GVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
E +A LVFEFM +G L D L G+ +T + + + G+ YL EA
Sbjct: 76 E----QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC- 126
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
++HRD+ + N L+ EN K++D GM + + D S + + ++ + +PE
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WASPEVFS 180
Query: 410 VGRASLMSDVFSFGVVLLELIT-GRQPI-HRSITKGEESLVLWATPRLQDSGTVISELPD 467
R S SDV+SFGV++ E+ + G+ P +RS ++ E + + L
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI------------STGFRLYK 228
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
PRL QIM + C + P+ RP S +++ L+ IA
Sbjct: 229 PRLAS---THVYQIMNH----CWRERPEDRPAFSRLLRQLAEIA 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 41/284 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G + VA+K K G ++ F+ E +++ +L H +V L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE--GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLD---GVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
E +A LVFEFM +G L D L G+ +T + + + G+ YL EA
Sbjct: 93 E----QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC- 143
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
++HRD+ + N L+ EN K++D GM + + D S + + ++ + +PE
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WASPEVFS 197
Query: 410 VGRASLMSDVFSFGVVLLELIT-GRQPI-HRSITKGEESLVLWATPRLQDSGTVISELPD 467
R S SDV+SFGV++ E+ + G+ P +RS ++ E + + L
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI------------STGFRLYK 245
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
PRL QIM + KE P+ RP S +++ L+ IA
Sbjct: 246 PRLAS---THVYQIMNHCWKE----RPEDRPAFSRLLRQLAEIA 282
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 130/282 (46%), Gaps = 35/282 (12%)
Query: 233 VGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G V+ G+L D +VAVK + P+ + FL E +L + H ++V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG--MNWDTRVAIAIGAARGLEYLHEAAA 349
++ + +V E + G D L + EG + T + + AA G+EYL
Sbjct: 182 TQ----KQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
+HRD+ + N L+ E KI+D GM+ R +ADG+ ++S Q + APE
Sbjct: 235 ---IHRDLAARNCLVTEKNVLKISDFGMS-REEADGV--YAASGGLRQVPVKWTAPEALN 288
Query: 410 VGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDP 468
GR S SDV+SFG++L E + G P + V + G LP P
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV--------EKG---GRLPCP 337
Query: 469 RLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L D + L ++C +P RP+ S + Q L +I
Sbjct: 338 ELCPD-------AVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 155/344 (45%), Gaps = 69/344 (20%)
Query: 231 NIVGQGGSSYVYRG-QLTDGRIV----AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
++G G VY+G + +G V A+K GP A+ F+ E +++ + H H+V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNL-------RDCLDGVLVEGMNWDTRVAIAIGAA 338
L+G C + LV + MP+G L +D + L+ +NW ++A
Sbjct: 81 RLLGVCLSPTIQ-----LVTQLMPHGCLLEYVHEHKDNIGSQLL--LNWCVQIA------ 127
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+G+ YL E R++HRD+ + N+L+ + KITD G+A+ L+ D ++ +M
Sbjct: 128 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE-KEYNADGGKM-- 181
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQD 457
+ A E + + SDV+S+GV + EL+T G +P
Sbjct: 182 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY--------------------- 220
Query: 458 SGTVISELPDPRLKGD-FPKEEM-QIMAYLAK-ECLQLDPDARPTMSEVVQILSTIAPDK 514
G E+PD KG+ P+ + I Y+ +C +D D+RP E+ S +A D
Sbjct: 221 DGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 280
Query: 515 SRRRNISLNLFQIFSAGGMEKEPSIERPDN--LFETLIESEELK 556
R + + K PS P++ F+ L++ E+L+
Sbjct: 281 QR--------YLVIQGDDRMKLPS---PNDSKFFQNLLDEEDLE 313
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 94 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 147
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTG-AKLPVKWM 203
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 263
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 264 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 95 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 148
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG-AKLPVKWM 204
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 265 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 294
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 25/227 (11%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSRLH 280
+K+ VG+G VY+ + + GRIVA+KR + +G P S + E+ +L LH
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP---STAIREISLLKELH 77
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAI-GAAR 339
H ++V L+ +R + L VFEFM +L+ LD G+ D+++ I + R
Sbjct: 78 HPNIVSLIDVI---HSERCLTL-VFEFM-EKDLKKVLDENKT-GLQ-DSQIKIYLYQLLR 130
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+ + H+ RILHRD+K N+L++ + K+ D G+A +A G+P S + + T
Sbjct: 131 GVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA---RAFGIPVRSYTHEVV--T 182
Query: 400 FGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445
Y AP+ M + S D++S G + E+ITG+ P+ +T ++
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQ 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 33 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 89
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 90 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 145
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 146 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 203
Query: 425 VLLELIT 431
VL EL T
Sbjct: 204 VLYELFT 210
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 94 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 147
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG-AKLPVKWM 203
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 263
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 264 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 293
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 34 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 90
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 91 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 146
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 147 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 204
Query: 425 VLLELIT 431
VL EL T
Sbjct: 205 VLYELFT 211
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 25/227 (11%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSRLH 280
+K+ VG+G VY+ + + GRIVA+KR + +G P S + E+ +L LH
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP---STAIREISLLKELH 77
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAI-GAAR 339
H ++V L+ +R + L VFEFM +L+ LD G+ D+++ I + R
Sbjct: 78 HPNIVSLIDVI---HSERCLTL-VFEFM-EKDLKKVLDENKT-GLQ-DSQIKIYLYQLLR 130
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+ + H+ RILHRD+K N+L++ + K+ D G+A +A G+P S + + T
Sbjct: 131 GVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA---RAFGIPVRSYTHEVV--T 182
Query: 400 FGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445
Y AP+ M + S D++S G + E+ITG+ P+ +T ++
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQ 228
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 95 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 148
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG-AKLPVKWM 204
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 265 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 93 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 146
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG-AKLPVKWM 202
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 262
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 263 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 90 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 143
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG-AKLPVKWM 199
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 259
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 260 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 87 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 140
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG-AKLPVKWM 196
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 256
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 257 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 286
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 35 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 91
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 92 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 147
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 425 VLLELIT 431
VL EL T
Sbjct: 206 VLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 38 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 94
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 95 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 150
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 208
Query: 425 VLLELIT 431
VL EL T
Sbjct: 209 VLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 35 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 91
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 92 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 147
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 425 VLLELIT 431
VL EL T
Sbjct: 206 VLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 40 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 96
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 97 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 152
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 153 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 210
Query: 425 VLLELIT 431
VL EL T
Sbjct: 211 VLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 66 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 122
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 123 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 178
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 179 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 236
Query: 425 VLLELIT 431
VL EL T
Sbjct: 237 VLYELFT 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 39 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 95
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 96 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 151
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 152 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 209
Query: 425 VLLELIT 431
VL EL T
Sbjct: 210 VLYELFT 216
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 92 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 145
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG-AKLPVKWM 201
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 261
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 262 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 291
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 42 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 98
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 99 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 154
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 155 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 212
Query: 425 VLLELIT 431
VL EL T
Sbjct: 213 VLYELFT 219
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 114 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 167
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG-AKLPVKWM 223
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 283
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 284 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 313
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VA+K K G + FL E ++ +L H +V L S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP--GTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +V E+M G+L D L + V +A A G+ Y+
Sbjct: 75 E-----EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NY 126
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++S+NIL+ L KI D G+A RL D + AR F + APE A+
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLA-RLIED-----NEXTARQGAKFPIKWTAPEAALY 180
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQP 435
GR ++ SDV+SFG++L EL+T GR P
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 41 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 97
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 98 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 153
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 154 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 211
Query: 425 VLLELIT 431
VL EL T
Sbjct: 212 VLYELFT 218
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G+++
Sbjct: 93 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKF 146
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG-AKLPVKWM 202
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 262
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 263 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 292
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G++Y
Sbjct: 113 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKY 166
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA-KLPVKWM 222
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 282
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 283 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 312
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 53 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 109
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 110 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 165
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 166 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 223
Query: 425 VLLELIT 431
VL EL T
Sbjct: 224 VLYELFT 230
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 56/302 (18%)
Query: 231 NIVGQGGSSYVYRG-QLTDGRIV----AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
++G G VY+G + +G V A+K GP A+ F+ E +++ + H H+V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNL-------RDCLDGVLVEGMNWDTRVAIAIGAA 338
L+G C + LV + MP+G L +D + L+ +NW ++A
Sbjct: 104 RLLGVCLSPTIQ-----LVTQLMPHGCLLEYVHEHKDNIGSQLL--LNWCVQIA------ 150
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+G+ YL E R++HRD+ + N+L+ + KITD G+A+ L+ D ++ +M
Sbjct: 151 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE-KEYNADGGKM-- 204
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQD 457
+ A E + + SDV+S+GV + EL+T G +P
Sbjct: 205 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY--------------------- 243
Query: 458 SGTVISELPDPRLKGD-FPKEEM-QIMAYLAK-ECLQLDPDARPTMSEVVQILSTIAPDK 514
G E+PD KG+ P+ + I Y+ +C +D D+RP E+ S +A D
Sbjct: 244 DGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 303
Query: 515 SR 516
R
Sbjct: 304 QR 305
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK+ + GP+ F E+ +L LH +V G S G++++RL V E++
Sbjct: 39 GALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFIVKYRG-VSYGPGRQSLRL-VMEYL 95
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P+G LRD L ++ + + +G+EYL + R +HRD+ + NIL++
Sbjct: 96 PSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEA 151
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
+ KI D G+AK L D P Q ++APE S SDV+SFGVVL E
Sbjct: 152 HVKIADFGLAKLLPLDKDYYVVREPG--QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 209
Query: 429 LIT 431
L T
Sbjct: 210 LFT 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 38 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 94
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
EF+P G+LR+ L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 95 MEFLPYGSLREYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 150
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 208
Query: 425 VLLELIT 431
VL EL T
Sbjct: 209 VLYELFT 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK+ + GP+ F E+ +L LH +V G S G++++RL V E++
Sbjct: 52 GALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFIVKYRG-VSYGPGRQSLRL-VMEYL 108
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P+G LRD L ++ + + +G+EYL + R +HRD+ + NIL++
Sbjct: 109 PSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEA 164
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
+ KI D G+AK L D P Q ++APE S SDV+SFGVVL E
Sbjct: 165 HVKIADFGLAKLLPLDKDYYVVREPG--QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 222
Query: 429 LIT 431
L T
Sbjct: 223 LFT 225
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G+++
Sbjct: 95 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKF 148
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG-AKLPVKWM 204
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 265 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 53 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 109
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 110 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 165
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 166 ENENRVKIGDFGLTKVLPQDKEXXKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 223
Query: 425 VLLELIT 431
VL EL T
Sbjct: 224 VLYELFT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G+++
Sbjct: 96 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKF 149
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG-AKLPVKWM 205
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 265
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 266 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 295
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK+ + GP+ F E+ +L LH +V G S G++++RL V E++
Sbjct: 40 GALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFIVKYRG-VSYGPGRQSLRL-VMEYL 96
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P+G LRD L ++ + + +G+EYL + R +HRD+ + NIL++
Sbjct: 97 PSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEA 152
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
+ KI D G+AK L D P Q ++APE S SDV+SFGVVL E
Sbjct: 153 HVKIADFGLAKLLPLDKDYYVVREPG--QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 210
Query: 429 LIT 431
L T
Sbjct: 211 LFT 213
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G+++
Sbjct: 100 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKF 153
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG-AKLPVKWM 209
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 269
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 270 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G+++
Sbjct: 95 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKF 148
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG-AKLPVKWM 204
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 265 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 294
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 63
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 64 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D ++PA
Sbjct: 120 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAPA 172
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
+ + APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 216
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 217 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
Query: 514 KS 515
S
Sbjct: 275 SS 276
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 62
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 63 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 118
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D ++PA
Sbjct: 119 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAPA 171
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
+ + APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 215
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 216 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 273
Query: 514 KS 515
S
Sbjct: 274 SS 275
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G+++
Sbjct: 154 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKF 207
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG-AKLPVKWM 263
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 323
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 324 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 353
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 230 SNIVGQGGSSYVYRGQL--TDGRIV--AVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ ++G+G VY G L DG+ + AVK S FLTE ++ H +V+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEY 343
L+G C G L+V +M +G+LR+ + E N + I G A+G+++
Sbjct: 96 SLLGICLRSEGSP---LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKF 149
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L A+ + +HRD+ + N +LDE K+ D G+A+ + S + + +
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTG-AKLPVKWM 205
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
A E + + SDV+SFGV+L EL+T P + + + ++ L RL
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 265
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L + LK PK EM RP+ SE+V +S I
Sbjct: 266 PLYEVMLKCWHPKAEM-----------------RPSFSELVSRISAI 295
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 35 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 91
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HRD+ + NIL+
Sbjct: 92 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 147
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEFFKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 425 VLLELIT 431
VL EL T
Sbjct: 206 VLYELFT 212
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRF-KTQGGPNADSVFLTEVDMLSRL 279
+ +K+ +VG+G V + + D GRIVA+K+F ++ + + E+ +L +L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR 339
H ++V L+ C K+ LVFEF+ + L D + G+++
Sbjct: 82 RHENLVNLLEVCK----KKKRWYLVFEFVDHTILDDL--ELFPNGLDYQVVQKYLFQIIN 135
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+ + H + I+HRDIK NIL+ ++ K+ D G A+ L A G R
Sbjct: 136 GIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW--- 189
Query: 400 FGYFAPEYAMVG--RASLMSDVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWAT--P 453
Y APE +VG + DV++ G ++ E+ G P I + ++ P
Sbjct: 190 --YRAPE-LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP 246
Query: 454 RLQD---SGTVISELPDPRLKGDFPKEEM-----QIMAYLAKECLQLDPDARPTMSEVVQ 505
R Q+ V + + P +K P E +++ LAK+CL +DPD RP +E++
Sbjct: 247 RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G +VAVK+ + GP+ F E+ +L LH +V G S G+ +RL V E++
Sbjct: 36 GALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFIVKYRG-VSYGPGRPELRL-VMEYL 92
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
P+G LRD L ++ + + +G+EYL + R +HRD+ + NIL++
Sbjct: 93 PSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEA 148
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
+ KI D G+AK L D P Q ++APE S SDV+SFGVVL E
Sbjct: 149 HVKIADFGLAKLLPLDKDXXVVREPG--QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 206
Query: 429 LIT 431
L T
Sbjct: 207 LFT 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 248 DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
D +VAVK K + +A F E ++L+ L H H+V G C+E R L+VFE+
Sbjct: 47 DKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL----LMVFEY 101
Query: 308 MPNGNLRDCL-----DGVLVEG--------MNWDTRVAIAIGAARGLEYLHEAAAPRILH 354
M +G+L L D L+ G + +A+A A G+ YL A +H
Sbjct: 102 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVH 158
Query: 355 RDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
RD+ + N L+ + L KI D GM++ + + R + PE + + +
Sbjct: 159 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG---GRTMLPIRWMPPESILYRKFT 215
Query: 415 LMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGD 473
SDV+SFGVVL E+ T G+QP ++ E++ D T EL PR
Sbjct: 216 TESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAI---------DCITQGRELERPR---A 261
Query: 474 FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
P E IM + C Q +P R ++ +V L +A
Sbjct: 262 CPPEVYAIM----RGCWQREPQQRHSIKDVHARLQALA 295
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 41/284 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G + VA+K + G ++ F+ E +++ +L H +V L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLD---GVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
E +A LV EFM +G L D L G+ +T + + + G+ YL EA
Sbjct: 74 E----QAPICLVTEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC- 124
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
++HRD+ + N L+ EN K++D GM + + D S + + ++ + +PE
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WASPEVFS 178
Query: 410 VGRASLMSDVFSFGVVLLELIT-GRQPI-HRSITKGEESLVLWATPRLQDSGTVISELPD 467
R S SDV+SFGV++ E+ + G+ P +RS ++ E + + L
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI------------STGFRLYK 226
Query: 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
PRL QIM + C + P+ RP S +++ L+ IA
Sbjct: 227 PRLAS---THVYQIMNH----CWRERPEDRPAFSRLLRQLAEIA 263
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 245 QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304
Q G +VAVK+ + + F E+++L L H ++V G C G+R ++L +
Sbjct: 36 QDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYS-AGRRNLKL-I 92
Query: 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
E++P G+LRD L E ++ + +G+EYL R +HR++ + NIL+
Sbjct: 93 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILV 148
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
+ KI D G+ K L D P + ++APE + S+ SDV+SFGV
Sbjct: 149 ENENRVKIGDFGLTKVLPQDKEYYKVKEPG--ESPIFWYAPESLTESKFSVASDVWSFGV 206
Query: 425 VLLELIT 431
VL EL T
Sbjct: 207 VLYELFT 213
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 248 DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
D +VAVK K + +A F E ++L+ L H H+V G C+E R L+VFE+
Sbjct: 41 DKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL----LMVFEY 95
Query: 308 MPNGNLRDCL-----DGVLVEG--------MNWDTRVAIAIGAARGLEYLHEAAAPRILH 354
M +G+L L D L+ G + +A+A A G+ YL A +H
Sbjct: 96 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVH 152
Query: 355 RDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
RD+ + N L+ + L KI D GM++ + + R + PE + + +
Sbjct: 153 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG---GRTMLPIRWMPPESILYRKFT 209
Query: 415 LMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGD 473
SDV+SFGVVL E+ T G+QP ++ E++ D T EL PR
Sbjct: 210 TESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAI---------DCITQGRELERPR---A 255
Query: 474 FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
P E IM + C Q +P R ++ +V L +A
Sbjct: 256 CPPEVYAIM----RGCWQREPQQRHSIKDVHARLQALA 289
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 248 DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
D +VAVK K + +A F E ++L+ L H H+V G C+E R L+VFE+
Sbjct: 70 DKMLVAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR----PLLMVFEY 124
Query: 308 MPNGNLRDCL-----DGVLVEG--------MNWDTRVAIAIGAARGLEYLHEAAAPRILH 354
M +G+L L D L+ G + +A+A A G+ YL A +H
Sbjct: 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVH 181
Query: 355 RDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
RD+ + N L+ + L KI D GM++ + + R + PE + + +
Sbjct: 182 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG---GRTMLPIRWMPPESILYRKFT 238
Query: 415 LMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGD 473
SDV+SFGVVL E+ T G+QP ++ E++ D T EL PR
Sbjct: 239 TESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAI---------DCITQGRELERPR---A 284
Query: 474 FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
P E IM + C Q +P R ++ +V L +A
Sbjct: 285 CPPEVYAIM----RGCWQREPQQRHSIKDVHARLQALA 318
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 62
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 63 VMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 118
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 119 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 175
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 176 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 215
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 216 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 273
Query: 514 KS 515
S
Sbjct: 274 SS 275
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 67 VMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 123 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 180 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+
Sbjct: 220 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 56/338 (16%)
Query: 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DG-RI-VAVKRFKTQGGPNADSVFLTEV 273
Y L+ KF +++G+G V + ++ DG R+ A+KR K + F E+
Sbjct: 9 YPVLDWNDIKFQ--DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGEL 66
Query: 274 DMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA 332
++L +L HH +++ L+G C R L E+ P+GNL D L V + D A
Sbjct: 67 EVLCKLGHHPNIINLLGACEH----RGYLYLAIEYAPHGNLLDFLRKSRV--LETDPAFA 120
Query: 333 IA----------------IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLG 376
IA ARG++YL + + +HRD+ + NIL+ EN AKI D G
Sbjct: 121 IANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 177
Query: 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+++ + + P R + A E + SDV+S+GV+L E+++
Sbjct: 178 LSRGQEVYVKKTMGRLPVR------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
Query: 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA 496
+ +T E L RL+ E+ D L ++C + P
Sbjct: 232 YCGMTCAELYEKLPQGYRLEKPLNCDDEVYD-----------------LMRQCWREKPYE 274
Query: 497 RPTMSEVVQILSTIAPDKSRRRNISLNLFQIFSAGGME 534
RP+ ++++ L+ + + R+ ++ L++ F+ G++
Sbjct: 275 RPSFAQILVSLNRML--EERKTYVNTTLYEKFTYAGID 310
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 56/338 (16%)
Query: 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DG-RI-VAVKRFKTQGGPNADSVFLTEV 273
Y L+ KF +++G+G V + ++ DG R+ A+KR K + F E+
Sbjct: 19 YPVLDWNDIKFQ--DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGEL 76
Query: 274 DMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA 332
++L +L HH +++ L+G C R L E+ P+GNL D L V + D A
Sbjct: 77 EVLCKLGHHPNIINLLGACEH----RGYLYLAIEYAPHGNLLDFLRKSRV--LETDPAFA 130
Query: 333 IA----------------IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLG 376
IA ARG++YL + + +HRD+ + NIL+ EN AKI D G
Sbjct: 131 IANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 187
Query: 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+++ + + P R + A E + SDV+S+GV+L E+++
Sbjct: 188 LSRGQEVYVKKTMGRLPVR------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
Query: 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA 496
+ +T E L RL+ E+ D L ++C + P
Sbjct: 242 YCGMTCAELYEKLPQGYRLEKPLNCDDEVYD-----------------LMRQCWREKPYE 284
Query: 497 RPTMSEVVQILSTIAPDKSRRRNISLNLFQIFSAGGME 534
RP+ ++++ L+ + + R+ ++ L++ F+ G++
Sbjct: 285 RPSFAQILVSLNRML--EERKTYVNTTLYEKFTYAGID 320
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 74
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 75 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 130
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 131 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 188 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 227
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 228 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 285
Query: 514 KS 515
S
Sbjct: 286 SS 287
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 63
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 64 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 120 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 177 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 216
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 217 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
Query: 514 KS 515
S
Sbjct: 275 SS 276
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 63
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 64 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 120 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 177 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 216
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 217 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
Query: 514 KS 515
S
Sbjct: 275 SS 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 67 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 123 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 180 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 220 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
Query: 514 KS 515
S
Sbjct: 278 SS 279
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 67 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 123 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 180 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+
Sbjct: 220 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 62 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 117
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 175 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+
Sbjct: 215 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 62 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 117
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 175 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+
Sbjct: 215 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 248 DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
D +VAVK K NA F E ++L+ L H H+V G C E G ++VFE+
Sbjct: 42 DKILVAVKTLK-DASDNARKDFHREAELLTNLQHEHIVKFYGVCVE--GDPL--IMVFEY 96
Query: 308 MPNGNLRDCL-----DGVLVEGMNWDTRVA------IAIGAARGLEYLHEAAAPRILHRD 356
M +G+L L D VL+ N T + IA A G+ YL A+ +HRD
Sbjct: 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRD 153
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS---PARMQGTFGYFAPEYAMVGRA 413
+ + N L+ ENL KI D GM++ + + P R + PE M +
Sbjct: 154 LATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR------WMPPESIMYRKF 207
Query: 414 SLMSDVFSFGVVLLELIT-GRQPIHR 438
+ SDV+S GVVL E+ T G+QP ++
Sbjct: 208 TTESDVWSLGVVLWEIFTYGKQPWYQ 233
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 232 IVGQGGSSYVYRGQL--TDGRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
++G G VY+G L + G+ VA+K K FL E ++ + H +++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DG---VLVEGMNWDTRVAIAIGAARG 340
L G S+++ +++ E+M NG L L DG VL V + G A G
Sbjct: 111 LEGVISKYKP----MMIITEYMENGALDKFLREKDGEFSVL-------QLVGMLRGIAAG 159
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
++YL A +HRD+ + NIL++ NL K++D G+++ L+ D + ++S ++
Sbjct: 160 MKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PI 214
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460
+ APE + + SDV+SFG+V+ E++T + + ++ E + D
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE------VMKAINDG-- 266
Query: 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI--APD 513
LP P D P Q+M +C Q + RP +++V IL + APD
Sbjct: 267 --FRLPTPM---DCPSAIYQLMM----QCWQQERARRPKFADIVSILDKLIRAPD 312
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 241 VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300
V++ QL + VAVK F Q + + + EV L + H +++ +G +E RG
Sbjct: 40 VWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG--AEKRGTSVD 94
Query: 301 --RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-------AAAPR 351
L+ F G+L D L +V +W+ IA ARGL YLHE P
Sbjct: 95 VDLWLITAFHEKGSLSDFLKANVV---SWNELCHIAETMARGLAYLHEDIPGLKDGHKPA 151
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
I HRDIKS N+LL NL A I D G+A LK + S + ++ GT Y APE + G
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLA--LKFEAGKSAGDTHGQV-GTRRYMAPE-VLEG 207
Query: 412 R------ASLMSDVFSFGVVLLELIT----GRQPIHRSITKGEESLVLWATPRLQD-SGT 460
A L D+++ G+VL EL + P+ + EE + P L+D
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG--QHPSLEDMQEV 265
Query: 461 VISELPDPRLKGDFPKEE-MQIMAYLAKECLQLDPDAR 497
V+ + P L+ + K M ++ +EC D +AR
Sbjct: 266 VVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 65
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 66 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 121
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 122 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 178
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 179 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 218
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+
Sbjct: 219 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + +N + +A
Sbjct: 67 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 123 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 180 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+
Sbjct: 220 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 37/279 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G + V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 79 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMV 410
+HRD++++NIL+ + L+ KI D G+A RL D + AR F + APE
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLA-RLIED-----AEXTAREGAKFPIKWTAPEAINY 184
Query: 411 GRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
G ++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD-- 233
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 234 ---NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 79 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGT 186
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 233
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 234 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 265
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 35/284 (12%)
Query: 236 GGSSY--VYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
GG Y VY G + VAVK K + FL E ++ + H ++V L+G C+
Sbjct: 20 GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ EFM GNL D L + ++ + +A + +EYL +
Sbjct: 78 ----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N L+ EN K+ D G+++ + D + + + ++ T APE +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYNK 186
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
S+ SDV++FGV+L E+ T G P P + S + EL + +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPY----------------PGIDPSQ--VYELLEKDYR 228
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515
+ P+ + + L + C Q +P RP+ +E+ Q T+ + S
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 83
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 84 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 135
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGT 191
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 238
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 239 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 270
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + ++ + +A
Sbjct: 62 VMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 117
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 175 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 215 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Query: 514 KS 515
S
Sbjct: 273 SS 274
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + ++ + +A
Sbjct: 62 VMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 117
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 175 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 215 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Query: 514 KS 515
S
Sbjct: 273 SS 274
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 84
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 85 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGT 192
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 239
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 240 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 79 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 186
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 233
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 234 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 79
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 80 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 131
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 187
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 234
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 235 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 266
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 56/338 (16%)
Query: 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DG-RI-VAVKRFKTQGGPNADSVFLTEV 273
Y L+ KF +++G+G V + ++ DG R+ A+KR K + F E+
Sbjct: 16 YPVLDWNDIKFQ--DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGEL 73
Query: 274 DMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA 332
++L +L HH +++ L+G C R L E+ P+GNL D L V + D A
Sbjct: 74 EVLCKLGHHPNIINLLGACEH----RGYLYLAIEYAPHGNLLDFLRKSRV--LETDPAFA 127
Query: 333 IA----------------IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLG 376
IA ARG++YL + + +HR++ + NIL+ EN AKI D G
Sbjct: 128 IANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFG 184
Query: 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+++ + + P R + A E + SDV+S+GV+L E+++
Sbjct: 185 LSRGQEVYVKKTMGRLPVR------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
Query: 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA 496
+ +T E L RL+ E+ D L ++C + P
Sbjct: 239 YCGMTCAELYEKLPQGYRLEKPLNCDDEVYD-----------------LMRQCWREKPYE 281
Query: 497 RPTMSEVVQILSTIAPDKSRRRNISLNLFQIFSAGGME 534
RP+ ++++ L+ + + R+ ++ L++ F+ G++
Sbjct: 282 RPSFAQILVSLNRML--EERKTYVNTTLYEKFTYAGID 317
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 35/284 (12%)
Query: 236 GGSSY--VYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
GG Y VY G + VAVK K + FL E ++ + H ++V L+G C+
Sbjct: 20 GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ EFM GNL D L + ++ + +A + +EYL +
Sbjct: 78 ----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N L+ EN K+ D G+++ + D + + + ++ T APE +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT----APESLAYNK 186
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
S+ SDV++FGV+L E+ T G P P + S + EL + +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPY----------------PGIDPSQ--VYELLEKDYR 228
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515
+ P+ + + L + C Q +P RP+ +E+ Q T+ + S
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 80
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 81 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 132
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 188
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 235
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 236 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 267
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 123/291 (42%), Gaps = 68/291 (23%)
Query: 248 DGRIVAVKRFKTQGGPN--ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305
D +VAVK K P A F E ++L+ L H H+V G C G ++VF
Sbjct: 44 DKMLVAVKALKD---PTLAARKDFQREAELLTNLQHEHIVKFYGVC----GDGDPLIMVF 96
Query: 306 EFMPNGNLRDCLDG------VLVEG--------MNWDTRVAIAIGAARGLEYLHEAAAPR 351
E+M +G+L L +LV+G + + IA A G+ YL A+
Sbjct: 97 EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQH 153
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS---PARMQGTFGYFAPEYA 408
+HRD+ + N L+ NL KI D GM++ + + P R + PE
Sbjct: 154 FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR------WMPPESI 207
Query: 409 MVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE--- 464
M + + SDV+SFGV+L E+ T G+QP W Q S T + E
Sbjct: 208 MYRKFTTESDVWSFGVILWEIFTYGKQP--------------W----FQLSNTEVIECIT 249
Query: 465 ----LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
L PR+ PKE +M C Q +P R + E+ +IL +
Sbjct: 250 QGRVLERPRV---CPKEVYDVML----GCWQREPQQRLNIKEIYKILHALG 293
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 79 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 186
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 233
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 234 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 84
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 85 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 192
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 239
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 240 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 73
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 74 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 125
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGT 181
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 228
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 229 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 260
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 88
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 89 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 140
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGT 196
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 243
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 244 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 275
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + ++ + +A
Sbjct: 62 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 117
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 175 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 215 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Query: 514 KS 515
S
Sbjct: 273 SS 274
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 87
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 88 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 139
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 195
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 242
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 243 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 86
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 87 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 138
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 194
Query: 413 ASLMSDVFSFGVVLLELIT-GRQP 435
++ SDV+SFG++L E++T GR P
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + ++ + +A
Sbjct: 62 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 117
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 175 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 214
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 215 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Query: 514 KS 515
S
Sbjct: 273 SS 274
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVD 274
+Y E + + +G G VY G + VAVK K + FL E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
++ + H ++V L+G C+ + ++ EFM GNL D L + ++ + +A
Sbjct: 67 VMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 122
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ +EYL + +HRD+ + N L+ EN K+ D G+++ + D + + +
Sbjct: 123 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATP 453
++ T APE + S+ SDV++FGV+L E+ T G P P
Sbjct: 180 PIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------P 219
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
+ S + EL + + + P+ + + L + C Q +P RP+ +E+ Q T+ +
Sbjct: 220 GIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
Query: 514 KS 515
S
Sbjct: 278 SS 279
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 40/299 (13%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHH 281
++ +F +G G + VY+G T G VA+K K S + E+ ++ L H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD----GVLVEGMNWDTRVAIAIGA 337
++V L LVFEFM N +L+ +D G G+ +
Sbjct: 63 ENIVRLYDVIH----TENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+GL + HE +ILHRD+K N+L+++ K+ D G+A +A G+P + S +
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA---RAFGIPVNTFSSEVV- 170
Query: 398 GTFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVL----WAT 452
T Y AP+ M R S D++S G +L E+ITG+ P+ T EE L L T
Sbjct: 171 -TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK-PLFPG-TNDEEQLKLIFDIMGT 227
Query: 453 PRLQDSGTVISELP--DPRLKGDFPKEEMQIMAYLAKE------------CLQLDPDAR 497
P + +++LP +P ++ P++ Q++ KE LQL+PD R
Sbjct: 228 PN-ESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMR 285
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKT-QGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+G+ VAVK K P F EV +L + H +++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + +V ++ +L L V + IA A+G++YLH A
Sbjct: 102 T-----KDNLAIVTQWCEGSSLYKHLH-VQETKFQMFQLIDIARQTAQGMDYLH---AKN 152
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV- 410
I+HRD+KS+NI L E L KI D G+A S S + G+ + APE +
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLA---TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 411 --GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL----WATPRLQDSGTVISE 464
S SDV+S+G+VL EL+TG P + I ++ + + +A+P L
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELP-YSHINNRDQIIFMVGRGYASPDLS-------- 260
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+L + PK M L +C++ + RP QILS+I
Sbjct: 261 ----KLYKNCPKA----MKRLVADCVKKVKEERPLFP---QILSSI 295
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G GG YV R D G VA+K+ + + P + E+ ++ +L+H +VV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 292 SEFR--GKRAMRLLVFEFMPNGNLRDCLDGV-----LVEGMNWDTRVAIAIGAARGLEYL 344
+ + LL E+ G+LR L+ L EG R ++ + L YL
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG---PIRTLLS-DISSALRYL 138
Query: 345 HEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFG 401
HE RI+HRD+K NI+L + L KI DLG AK L L C+ GT
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--CTE----FVGTLQ 189
Query: 402 YFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + ++ D +SFG + E ITG +P
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G GG YV R D G VA+K+ + + P + E+ ++ +L+H +VV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 292 SEFR--GKRAMRLLVFEFMPNGNLRDCLDGV-----LVEGMNWDTRVAIAIGAARGLEYL 344
+ + LL E+ G+LR L+ L EG R ++ + L YL
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG---PIRTLLS-DISSALRYL 137
Query: 345 HEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFG 401
HE RI+HRD+K NI+L + L KI DLG AK L L C+ GT
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--CTE----FVGTLQ 188
Query: 402 YFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + ++ D +SFG + E ITG +P
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY G + VAVK K + FL E ++ + H ++V L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+ + ++ EFM GNL D L + ++ + +A + +EYL +
Sbjct: 77 T----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRD+ + N L+ EN K+ D G+++ + D + + + ++ T APE
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYN 185
Query: 412 RASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
+ S+ SDV++FGV+L E+ T G P P + S + EL +
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPY----------------PGIDPSQ--VYELLEKDY 227
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515
+ + P+ + + L + C Q +P RP+ +E+ Q T+ + S
Sbjct: 228 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 35/311 (11%)
Query: 207 TIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNA 265
T++G + +Y E + + +G G VY G + VAVK K
Sbjct: 201 TVYG--VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 258
Query: 266 DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGM 325
+ FL E ++ + H ++V L+G C+ + ++ EFM GNL D L + +
Sbjct: 259 E--FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEV 312
Query: 326 NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385
N + +A + +EYL + +HR++ + N L+ EN K+ D G+++ + D
Sbjct: 313 NAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 369
Query: 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGE 444
+ + + ++ T APE + S+ SDV++FGV+L E+ T G P
Sbjct: 370 YTAHAGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-------- 417
Query: 445 ESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
P + S + EL + + + P+ + + L + C Q +P RP+ +E+
Sbjct: 418 --------PGIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 467
Query: 505 QILSTIAPDKS 515
Q T+ + S
Sbjct: 468 QAFETMFQESS 478
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 24/230 (10%)
Query: 233 VGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCHVVPLVG 289
+G GG S VY + T I VA+K +++ F EV S+L H ++V ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGAARGLEYLHEAA 348
E LV E++ L + ++ G ++ DT + G+++ H+
Sbjct: 79 VDEE----DDCYYLVMEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHDM- 130
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
RI+HRDIK NIL+D N KI D G+AK L L + + GT YF+PE A
Sbjct: 131 --RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN----HVLGTVQYFSPEQA 184
Query: 409 MVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458
+D++S G+VL E++ G P + E+ V A +QDS
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNG------ETAVSIAIKHIQDS 228
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 35/311 (11%)
Query: 207 TIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNA 265
T++G + +Y E + + +G G VY G + VAVK K
Sbjct: 243 TVYG--VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 300
Query: 266 DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGM 325
+ FL E ++ + H ++V L+G C+ + ++ EFM GNL D L + +
Sbjct: 301 E--FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEV 354
Query: 326 NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385
N + +A + +EYL + +HR++ + N L+ EN K+ D G+++ + D
Sbjct: 355 NAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 411
Query: 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGE 444
+ + + ++ T APE + S+ SDV++FGV+L E+ T G P
Sbjct: 412 YTAHAGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-------- 459
Query: 445 ESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
P + S + EL + + + P+ + + L + C Q +P RP+ +E+
Sbjct: 460 --------PGIDLS--QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 509
Query: 505 QILSTIAPDKS 515
Q T+ + S
Sbjct: 510 QAFETMFQESS 520
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G VAVK K QG + D+ FL E +++ +L H +V L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 74
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ E+M NG+L D L + + + +A A G+ ++ E
Sbjct: 75 Q-----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 126
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HR+++++NIL+ + L+ KI D G+A+ ++ + + + ++ T APE G
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGT 182
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L E++T GR P + +T E L+ ++ PD
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIP-YPGMTNPE------VIQNLERGYRMVR--PD---- 229
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
+ P+E Q+M + C + P+ RPT + +L
Sbjct: 230 -NCPEELYQLM----RLCWKERPEDRPTFDYLRSVLE 261
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 77 NPHVCRLLGICLT-----STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA--- 128
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 129 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 180
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 181 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 238
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 239 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 281
Query: 515 SR 516
R
Sbjct: 282 QR 283
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 47/293 (16%)
Query: 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSV------FLTEVDMLSRLHHCHVV 285
+G+GG V++G+L D +VA+K + F EV ++S L+H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNL-RDCLDGVLVEGMNWDTRVAIAIGAARGLEYL 344
L G +V EF+P G+L LD + W ++ + + A G+EY+
Sbjct: 87 KLYGLM------HNPPRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYM 138
Query: 345 HEAAAPRILHRDIKSSNIL---LDEN--LNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
P I+HRD++S NI LDEN + AK+ D G++++ S + + G
Sbjct: 139 QNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ--------SVHSVSGLLGN 189
Query: 400 FGYFAPEYAMVGRASLM--SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
F + APE S +D +SF ++L ++TG P ++ +++
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-----------YSYGKIKF 238
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ E P + D P ++ C DP RP S +V+ LS +
Sbjct: 239 INMIREEGLRPTIPEDCPPRLRNVIEL----CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 130/294 (44%), Gaps = 39/294 (13%)
Query: 232 IVGQGGSSYVYRGQLTD---GRI-VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPL 287
++G+G VY G+ D RI A+K FL E ++ L+H +V+ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 288 VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG--AARGLEYLH 345
+G G + ++ +M +G D L + N + I+ G ARG+EYL
Sbjct: 88 IGIMLPPEG---LPHVLLPYMCHG---DLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA 141
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR-LKADGLPSCSSSPARMQGTFGYFA 404
E + +HRD+ + N +LDE+ K+ D G+A+ L + AR+ + A
Sbjct: 142 EQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKWTA 196
Query: 405 PEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
E R + SDV+SFGV+L EL+T P +R I + + L R
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR---------- 246
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT----MSEVVQILSTIAPDK 514
LP P P Q+M ++C + DP RPT + EV QI+S + D
Sbjct: 247 LPQPEY---CPDSLYQVM----QQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 35/311 (11%)
Query: 207 TIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNA 265
TI+G + +Y E + + +G G VY G + VAVK K
Sbjct: 204 TIYG--VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 261
Query: 266 DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGM 325
+ FL E ++ + H ++V L+G C+ + ++ EFM GNL D L + +
Sbjct: 262 E--FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEV 315
Query: 326 NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385
+ + +A + +EYL + +HR++ + N L+ EN K+ D G+++ + D
Sbjct: 316 SAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372
Query: 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGE 444
+ + + ++ T APE + S+ SDV++FGV+L E+ T G P
Sbjct: 373 YTAHAGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-------- 420
Query: 445 ESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
P + S + EL + + + P+ + + L + C Q +P RP+ +E+
Sbjct: 421 --------PGIDLSQ--VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 470
Query: 505 QILSTIAPDKS 515
Q T+ + S
Sbjct: 471 QAFETMFQESS 481
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 127/302 (42%), Gaps = 48/302 (15%)
Query: 219 ALEHATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLS 277
+L +A+D F ++GQG V + + D R A+K K + S L+EV +L+
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVMLLA 57
Query: 278 RLHHCHVVPLVGYCSEFRG---------KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW- 327
L+H +VV E R K++ + E+ NG L D + E +N
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQ 114
Query: 328 -DTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------- 379
D + L Y+H I+HRD+K NI +DE+ N KI D G+AK
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYA-MVGRASLMSDVFSFGVVLLELITGRQPI 436
+L + LP S + GT Y A E G + D++S G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----- 226
Query: 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA 496
+ G E + + R +V E P DF +M++ + + + DP+
Sbjct: 227 --PFSTGMERVNILKKLR-----SVSIEFP-----PDFDDNKMKVEKKIIRLLIDHDPNK 274
Query: 497 RP 498
RP
Sbjct: 275 RP 276
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 77 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 128
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 129 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 180
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 181 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 238
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 239 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 281
Query: 515 SR 516
R
Sbjct: 282 QR 283
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 78 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 129
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 130 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 181
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 182 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 239
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 240 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 282
Query: 515 SR 516
R
Sbjct: 283 QR 284
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 52/305 (17%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 80 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 131
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+
Sbjct: 132 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEYH 179
Query: 396 MQG---TFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWA 451
+G + A E + + SDV+S+GV + EL+T G +P + I E S +L
Sbjct: 180 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEK 238
Query: 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
R LP P P + + + K C +D D+RP E++ S +A
Sbjct: 239 GER----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMA 281
Query: 512 PDKSR 516
D R
Sbjct: 282 RDPQR 286
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 76 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 127
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 128 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 179
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 180 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 237
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 238 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 280
Query: 515 SR 516
R
Sbjct: 281 QR 282
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 131/316 (41%), Gaps = 57/316 (18%)
Query: 222 HATDK-----FSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDM 275
H DK F ++G GG V++ + DG+ +KR K EV
Sbjct: 3 HTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-----REVKA 57
Query: 276 LSRLHHCHVVPLVG------YCSEFRGKRAMR------LLVFEFMPNGNLRDCLDGVLVE 323
L++L H ++V G Y E K + R + EF G L ++ E
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 324 GMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383
++ + + +G++Y+H + ++++RD+K SNI L + KI D G+ LK
Sbjct: 118 KLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 174
Query: 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKG 443
DG R +GT Y +PE D+++ G++L EL +H T
Sbjct: 175 DG------KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL------LHVCDTAF 222
Query: 444 EESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
E S ++L D + F K+E ++ L L P+ RP SE+
Sbjct: 223 ETS-------------KFFTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEI 265
Query: 504 VQILSTI--APDKSRR 517
++ L+ +P+K+ R
Sbjct: 266 LRTLTVWKKSPEKNER 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVK--RFKTQGGPNADSVFLTEVDMLSR 278
H +D++ I+G GG S V+ + L D R VAVK R P+ F E +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGA 337
L+H +V + + +V E++ LRD V EG M + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEVIADA 125
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+ L + H+ I+HRD+K +NIL+ K+ D G+A+ + G + A +
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSG--NSVXQTAAVI 180
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
GT Y +PE A SDV+S G VL E++TG P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 79 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 130
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 131 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 182
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 183 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 240
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 241 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 283
Query: 515 SR 516
R
Sbjct: 284 QR 285
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 76 NPHVCRLLGICLT-----STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA--- 127
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 128 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 179
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 180 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 237
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 238 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 280
Query: 515 SR 516
R
Sbjct: 281 QR 282
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
+G+G V+RG+ G VAVK F ++ S F E+ L H +++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLH---- 345
++ G LV ++ +G+L D L+ V VEGM + +A+ A GL +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 122
Query: 346 -EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
P I HRD+KS NIL+ +N I DLG+A R + + +P GT Y A
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTKRYMA 181
Query: 405 PE----------YAMVGRASLMSDVFSFGVVLLEL-----ITGRQPIHRSITKGEESLVL 449
PE + RA D+++ G+V E+ I G IH LV
Sbjct: 182 PEVLDDSINMKHFESFKRA----DIYAMGLVFWEIARRCSIGG---IHEDYQLPYYDLVP 234
Query: 450 WATPRLQDSGTVISELPDPRLKGDFPK-----EEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P +++ V+ E +L+ + P E +++MA + +EC + AR T +
Sbjct: 235 -SDPSVEEMRKVVCE---QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 290
Query: 505 QILSTIA 511
+ LS ++
Sbjct: 291 KTLSQLS 297
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 48/303 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGRIV----AVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G V A+K + P A+ L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 76 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 127
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 128 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 179
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 180 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 237
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYL-AKECLQLDPDARPTMSEVVQILSTIAPD 513
LP P + I Y+ ++C +D D+RP E++ S +A D
Sbjct: 238 ----------LPQPPI--------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279
Query: 514 KSR 516
R
Sbjct: 280 PQR 282
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 35/252 (13%)
Query: 269 FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWD 328
FL EV ++ L H +V+ +G ++ KR + E++ G LR + + + W
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVL--YKDKRLN--FITEYIKGGTLRGIIKSMDSQ-YPWS 108
Query: 329 TRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK-----RLKA 383
RV+ A A G+ YLH I+HRD+ S N L+ EN N + D G+A+ + +
Sbjct: 109 QRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 384 DGLPSCSSSPARMQ-----GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHR 438
+GL S P R + G + APE DVFSFG+VL E+I GR
Sbjct: 166 EGLRSL-KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GR----- 218
Query: 439 SITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP 498
+ + L PR D G + D + P I C LDP+ RP
Sbjct: 219 -VNADPDYL-----PRTMDFGLNVRGFLDRYCPPNCPPSFFPITV----RCCDLDPEKRP 268
Query: 499 TMSEVVQILSTI 510
+ ++ L T+
Sbjct: 269 SFVKLEHWLETL 280
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 48/303 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 86 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 137
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 138 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 189
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 190 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 247
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYL-AKECLQLDPDARPTMSEVVQILSTIAPD 513
LP P + I Y+ ++C +D D+RP E++ S +A D
Sbjct: 248 ----------LPQPPI--------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 289
Query: 514 KSR 516
R
Sbjct: 290 PQR 292
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGRIV----AVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G V A+K + P A+ L E +++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 70 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 121
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 122 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 173
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 174 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 231
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 232 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 274
Query: 515 SR 516
R
Sbjct: 275 QR 276
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
+G+G V+RG+ G VAVK F ++ S F E+ L H +++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLH---- 345
++ G LV ++ +G+L D L+ V VEGM + +A+ A GL +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 121
Query: 346 -EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
P I HRD+KS NIL+ +N I DLG+A R + + +P GT Y A
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTKRYMA 180
Query: 405 PE----------YAMVGRASLMSDVFSFGVVLLEL-----ITGRQPIHRSITKGEESLVL 449
PE + RA D+++ G+V E+ I G IH LV
Sbjct: 181 PEVLDDSINMKHFESFKRA----DIYAMGLVFWEIARRCSIGG---IHEDYQLPYYDLVP 233
Query: 450 WATPRLQDSGTVISELPDPRLKGDFPK-----EEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P +++ V+ E +L+ + P E +++MA + +EC + AR T +
Sbjct: 234 -SDPSVEEMRKVVCE---QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289
Query: 505 QILSTIA 511
+ LS ++
Sbjct: 290 KTLSQLS 296
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVK--RFKTQGGPNADSVFLTEVDMLSR 278
H +D++ I+G GG S V+ + L D R VAVK R P+ F E +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGA 337
L+H +V + + +V E++ LRD V EG M + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEVIADA 125
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+ L + H+ I+HRD+K +NI++ K+ D G+A+ + G + + A +
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG--NSVTQTAAVI 180
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
GT Y +PE A SDV+S G VL E++TG P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVK--RFKTQGGPNADSVFLTEVDMLSR 278
H +D++ I+G GG S V+ + L D R VAVK R P+ F E +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGA 337
L+H +V + + +V E++ LRD V EG M + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEVIADA 125
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+ L + H+ I+HRD+K +NI++ K+ D G+A+ + G + + A +
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG--NSVTQTAAVI 180
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
GT Y +PE A SDV+S G VL E++TG P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 47/293 (16%)
Query: 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSV------FLTEVDMLSRLHHCHVV 285
+G+GG V++G+L D +VA+K + F EV ++S L+H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNL-RDCLDGVLVEGMNWDTRVAIAIGAARGLEYL 344
L G +V EF+P G+L LD + W ++ + + A G+EY+
Sbjct: 87 KLYGLM------HNPPRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYM 138
Query: 345 HEAAAPRILHRDIKSSNIL---LDEN--LNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
P I+HRD++S NI LDEN + AK+ D G +++ S + + G
Sbjct: 139 QNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ--------SVHSVSGLLGN 189
Query: 400 FGYFAPEYAMVGRASLM--SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
F + APE S +D +SF ++L ++TG P ++ +++
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-----------YSYGKIKF 238
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ E P + D P ++ C DP RP S +V+ LS +
Sbjct: 239 INMIREEGLRPTIPEDCPPRLRNVIEL----CWSGDPKKRPHFSYIVKELSEL 287
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
+G+G V+RG+ G VAVK F ++ S F E+ L H +++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLH---- 345
++ G LV ++ +G+L D L+ V VEGM + +A+ A GL +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 124
Query: 346 -EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
P I HRD+KS NIL+ +N I DLG+A R + + +P GT Y A
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTKRYMA 183
Query: 405 PE----------YAMVGRASLMSDVFSFGVVLLEL-----ITGRQPIHRSITKGEESLVL 449
PE + RA D+++ G+V E+ I G IH LV
Sbjct: 184 PEVLDDSINMKHFESFKRA----DIYAMGLVFWEIARRCSIGG---IHEDYQLPYYDLVP 236
Query: 450 WATPRLQDSGTVISELPDPRLKGDFPK-----EEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P +++ V+ E +L+ + P E +++MA + +EC + AR T +
Sbjct: 237 -SDPSVEEMRKVVCE---QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 292
Query: 505 QILSTIA 511
+ LS ++
Sbjct: 293 KTLSQLS 299
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
+G+G V+RG+ G VAVK F ++ S F E+ L H +++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLH---- 345
++ G LV ++ +G+L D L+ V VEGM + +A+ A GL +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 127
Query: 346 -EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
P I HRD+KS NIL+ +N I DLG+A R + + +P GT Y A
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTKRYMA 186
Query: 405 PE----------YAMVGRASLMSDVFSFGVVLLEL-----ITGRQPIHRSITKGEESLVL 449
PE + RA D+++ G+V E+ I G IH LV
Sbjct: 187 PEVLDDSINMKHFESFKRA----DIYAMGLVFWEIARRCSIGG---IHEDYQLPYYDLVP 239
Query: 450 WATPRLQDSGTVISELPDPRLKGDFPK-----EEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P +++ V+ E +L+ + P E +++MA + +EC + AR T +
Sbjct: 240 -SDPSVEEMRKVVCE---QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 295
Query: 505 QILSTIA 511
+ LS ++
Sbjct: 296 KTLSQLS 302
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 79 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 130
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 131 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 182
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 183 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 240
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 241 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 283
Query: 515 SR 516
R
Sbjct: 284 QR 285
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 76 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 127
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 128 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 179
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 180 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 237
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 238 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 280
Query: 515 SR 516
R
Sbjct: 281 QR 282
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 48/303 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 79 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 130
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 131 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 182
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 183 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 240
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYL-AKECLQLDPDARPTMSEVVQILSTIAPD 513
LP P + I Y+ ++C +D D+RP E++ S +A D
Sbjct: 241 ----------LPQPPI--------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 282
Query: 514 KSR 516
R
Sbjct: 283 PQR 285
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
+G+G V+RG+ G VAVK F ++ S F E+ L H +++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLH---- 345
++ G LV ++ +G+L D L+ V VEGM + +A+ A GL +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 147
Query: 346 -EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
P I HRD+KS NIL+ +N I DLG+A R + + +P GT Y A
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTKRYMA 206
Query: 405 PE----------YAMVGRASLMSDVFSFGVVLLEL-----ITGRQPIHRSITKGEESLVL 449
PE + RA D+++ G+V E+ I G IH LV
Sbjct: 207 PEVLDDSINMKHFESFKRA----DIYAMGLVFWEIARRCSIGG---IHEDYQLPYYDLVP 259
Query: 450 WATPRLQDSGTVISELPDPRLKGDFPK-----EEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P +++ V+ E +L+ + P E +++MA + +EC + AR T +
Sbjct: 260 -SDPSVEEMRKVVCE---QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 315
Query: 505 QILSTIA 511
+ LS ++
Sbjct: 316 KTLSQLS 322
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 78 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 129
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 130 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 181
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 182 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 239
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 240 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 282
Query: 515 SR 516
R
Sbjct: 283 QR 284
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G+G V G G VAVK K A FL E ++++L H ++V L+G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +G +V E+M G+L D L + D + ++ +EYL
Sbjct: 257 EEKGGL---YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 310
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N+L+ E+ AK++D G+ K +A P + + APE +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK------WTAPEALREKK 362
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
S SDV+SFG++L E+ + GR P R K PR++ K
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKG-----------YK 404
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
D P + + K C LD RPT ++ + L I
Sbjct: 405 MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 82 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 133
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 134 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 185
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 186 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 243
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 244 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 286
Query: 515 SR 516
R
Sbjct: 287 QR 288
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
+G+G V+RG+ G VAVK F ++ S F E+ L H +++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLH---- 345
++ G LV ++ +G+L D L+ V VEGM + +A+ A GL +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 160
Query: 346 -EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
P I HRD+KS NIL+ +N I DLG+A R + + +P GT Y A
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTKRYMA 219
Query: 405 PE----------YAMVGRASLMSDVFSFGVVLLEL-----ITGRQPIHRSITKGEESLVL 449
PE + RA D+++ G+V E+ I G IH LV
Sbjct: 220 PEVLDDSINMKHFESFKRA----DIYAMGLVFWEIARRCSIGG---IHEDYQLPYYDLVP 272
Query: 450 WATPRLQDSGTVISELPDPRLKGDFPK-----EEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P +++ V+ E +L+ + P E +++MA + +EC + AR T +
Sbjct: 273 -SDPSVEEMRKVVCE---QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 328
Query: 505 QILSTIA 511
+ LS ++
Sbjct: 329 KTLSQLS 335
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 48/303 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 78 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 129
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G AK L A+ +
Sbjct: 130 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-- 181
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 182 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 239
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYL-AKECLQLDPDARPTMSEVVQILSTIAPD 513
LP P + I Y+ ++C +D D+RP E++ S +A D
Sbjct: 240 ----------LPQPPI--------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 281
Query: 514 KSR 516
R
Sbjct: 282 PQR 284
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 101 NPHVCRLLGICL-----TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 152
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 153 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 204
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 205 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 262
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 263 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 305
Query: 515 SR 516
R
Sbjct: 306 QR 307
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 83 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 134
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 135 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 186
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 187 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 244
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 245 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 287
Query: 515 SR 516
R
Sbjct: 288 QR 289
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 79 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 130
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 131 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 182
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 183 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 240
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 241 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 283
Query: 515 SR 516
R
Sbjct: 284 QR 285
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 80 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 131
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G AK L A+ +
Sbjct: 132 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-- 183
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 184 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 241
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 242 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 284
Query: 515 SR 516
R
Sbjct: 285 QR 286
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 78 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 129
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G AK L A+ +
Sbjct: 130 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-- 181
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 182 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 239
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 240 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 282
Query: 515 SR 516
R
Sbjct: 283 QR 284
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 2 HAERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 61
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 62 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 118
Query: 318 ----------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 119 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 175
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 176 NVVKICDFGLARDIXKDP-DXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 233 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 276
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 277 --DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+A+ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLARVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 49/324 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ + +G+G V + R VAVK K
Sbjct: 12 HCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 71
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 72 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 128
Query: 318 ---------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 129 NEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKN 185
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L E
Sbjct: 186 VVKICDFGLARDIXKDP-DXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 429 LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYLA 486
+ + + + EE R GT R++ D+ EM Q M
Sbjct: 243 IFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML--- 285
Query: 487 KECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 286 -DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 48/323 (14%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 13 HCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGAT 72
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 73 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 129
Query: 318 --------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN 369
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 130 NEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV 186
Query: 370 AKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLEL 429
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L E+
Sbjct: 187 VKICDFGLARDIXKDP-DXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 430 ITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYLAK 487
+ + + EE R GT R++ D+ EM Q M
Sbjct: 244 FSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML---- 285
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 286 DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 137/321 (42%), Gaps = 46/321 (14%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ + +G+G V + R VAVK K
Sbjct: 11 HCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGAT 70
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 127
Query: 318 ------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+ + + + + + A+G+E+L A+ + +HRD+ + NILL E K
Sbjct: 128 NEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVK 184
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
I D G+A+ + D AR+ + APE ++ SDV+SFGV+L E+ +
Sbjct: 185 ICDFGLARDIYKDP-DYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Query: 432 GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYLAKEC 489
+ + EE R GT R++ D+ EM Q M +C
Sbjct: 242 LGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML----DC 283
Query: 490 LQLDPDARPTMSEVVQILSTI 510
+P RPT SE+V+ L +
Sbjct: 284 WHGEPSQRPTFSELVEHLGNL 304
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 47/293 (16%)
Query: 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSV------FLTEVDMLSRLHHCHVV 285
+G+GG V++G+L D +VA+K + F EV ++S L+H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNL-RDCLDGVLVEGMNWDTRVAIAIGAARGLEYL 344
L G +V EF+P G+L LD + W ++ + + A G+EY+
Sbjct: 87 KLYGLM------HNPPRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYM 138
Query: 345 HEAAAPRILHRDIKSSNIL---LDEN--LNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
P I+HRD++S NI LDEN + AK+ D ++++ S + + G
Sbjct: 139 QNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ--------SVHSVSGLLGN 189
Query: 400 FGYFAPEYAMVGRASLM--SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
F + APE S +D +SF ++L ++TG P ++ +++
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-----------YSYGKIKF 238
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ E P + D P ++ C DP RP S +V+ LS +
Sbjct: 239 INMIREEGLRPTIPEDCPPRLRNVIEL----CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 135/321 (42%), Gaps = 58/321 (18%)
Query: 215 FSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGGPNADSV 268
+ S E D+ + +G+G V + R VAVK K +
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 269 FLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---------- 317
++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ + + + + + A+G+E+L A+ + +HRD+ + NILL E KI D G+
Sbjct: 134 KDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGL 190
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + D AR+ + APE ++ SDV+SFGV+L E+ +
Sbjct: 191 ARDIYKDP-DYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------ 241
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLK-------GDFPKEEM-QIMAYLAKEC 489
L A+P G I E RLK D+ EM Q M +C
Sbjct: 242 -----------LGASPY---PGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTML----DC 283
Query: 490 LQLDPDARPTMSEVVQILSTI 510
+P RPT SE+V+ L +
Sbjct: 284 WHGEPSQRPTFSELVEHLGNL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 102
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 103 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 158
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 159 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 217 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 255
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 256 DCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 73 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 124
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 125 ---EGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 176
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 177 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 234
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 235 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 277
Query: 515 SR 516
R
Sbjct: 278 QR 279
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 2 HAERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 61
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 62 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVITEFCKFGNLSTYLRSKR 118
Query: 318 ----------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 119 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 175
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 176 NVVKICDFGLARDIXKDP-DXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 233 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 276
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 277 --DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 41/289 (14%)
Query: 232 IVGQGGSSYVYRGQLT-DGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPL 287
++G G V G L G+ VA+K K+ FL+E ++ + H +V+ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 288 VGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEYL 344
G + K +++ EFM NG+L L DG V + G A G++YL
Sbjct: 100 EGVVT----KSTPVMIITEFMENGSLDSFLRQNDGQFTV----IQLVGMLRGIAAGMKYL 151
Query: 345 HEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
A +HRD+ + NIL++ NL K++D G+++ L+ D +S + + A
Sbjct: 152 ---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 405 PEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
PE + + SDV+S+G+V+ E+++ + + +T QD I +
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-------------QDVINAIEQ 255
Query: 465 ---LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
LP P D P Q+M +C Q D + RP ++V L +
Sbjct: 256 DYRLPPPM---DCPSALHQLML----DCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 48/303 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 78 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 129
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G AK L A+ +
Sbjct: 130 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-- 181
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 182 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 239
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYL-AKECLQLDPDARPTMSEVVQILSTIAPD 513
LP P + I Y+ ++C +D D+RP E++ S +A D
Sbjct: 240 ----------LPQPPI--------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 281
Query: 514 KSR 516
R
Sbjct: 282 PQR 284
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 39/288 (13%)
Query: 231 NIVGQGGSSYVYRGQL-TDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
I+G G S V G+L G+ VA+K K FL+E ++ + H +++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G + RG+ AM +V E+M NG+L L DG V + G G+ Y
Sbjct: 115 LEGVVT--RGRLAM--IVTEYMENGSLDTFLRTHDGQF----TIMQLVGMLRGVGAGMRY 166
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + +HRD+ + N+L+D NL K++D G+++ L+ D P + + + +
Sbjct: 167 LSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD--PDAAXTTTGGKIPIRWT 221
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462
APE S SDV+SFGVV+ E++ G +P + S V + G
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--------EEGY-- 271
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
LP P P Q+M +C D RP S++V +L +
Sbjct: 272 -RLPAPM---GCPHALHQLML----DCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 11 HCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 70
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 127
Query: 318 ----------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 128 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 184
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 185 NVVKICDFGLARDIXKDP-DXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 242 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 285
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 286 --DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G+G V G G VAVK K A FL E ++++L H ++V L+G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +G +V E+M G+L D L + D + ++ +EYL
Sbjct: 70 EEKGGL---YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 123
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N+L+ E+ AK++D G+ K +A P + + APE +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK------WTAPEALREKK 175
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
S SDV+SFG++L E+ + GR P R K PR++ + + PD
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKM--DAPD---- 222
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
P ++M K C LD RP+ ++ + L I
Sbjct: 223 -GCPPAVYEVM----KNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 76 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 127
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G AK L A+ +
Sbjct: 128 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-- 179
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 180 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 237
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 238 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 280
Query: 515 SR 516
R
Sbjct: 281 QR 282
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 100/230 (43%), Gaps = 16/230 (6%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHH 281
+ F N++G+G + VYR + + G VA+K + A V EV + +L H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGL 341
++ L Y + LV E NG + L V+ + + G+
Sbjct: 71 PSILELYNYFED----SNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGM 125
Query: 342 EYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFG 401
YLH ILHRD+ SN+LL N+N KI D G+A +LK +P + GT
Sbjct: 126 LYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK---MP--HEKHYTLCGTPN 177
Query: 402 YFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451
Y +PE A L SDV+S G + L+ GR P K + V+ A
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 119
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 120 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 175
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 176 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 234 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 272
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 273 DCWQKDRNNRPKFEQIVSILDKL 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 2 HAERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 61
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 62 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVITEFCKFGNLSTYLRSKR 118
Query: 318 ----------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 119 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 175
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 176 NVVKICDFGLARDIYKDP-DYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 233 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 276
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 277 --DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 39/288 (13%)
Query: 231 NIVGQGGSSYVYRGQL-TDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
I+G G S V G+L G+ VA+K K FL+E ++ + H +++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G + RG+ AM +V E+M NG+L L DG V + G G+ Y
Sbjct: 115 LEGVVT--RGRLAM--IVTEYMENGSLDTFLRTHDGQF----TIMQLVGMLRGVGAGMRY 166
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + +HRD+ + N+L+D NL K++D G+++ L+ D P + + + +
Sbjct: 167 LSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD--PDAAYTTTGGKIPIRWT 221
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462
APE S SDV+SFGVV+ E++ G +P + S V + G
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--------EEGY-- 271
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
LP P P Q+M +C D RP S++V +L +
Sbjct: 272 -RLPAPM---GCPHALHQLML----DCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++ G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 83 NPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 134
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 135 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 186
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 187 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 244
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 245 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 287
Query: 515 SR 516
R
Sbjct: 288 QR 289
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 83 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 134
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G AK L A+ +
Sbjct: 135 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-- 186
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 187 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 244
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 245 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 287
Query: 515 SR 516
R
Sbjct: 288 QR 289
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G+G V G G VAVK K A FL E ++++L H ++V L+G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +G +V E+M G+L D L + D + ++ +EYL
Sbjct: 85 EEKGGL---YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 138
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N+L+ E+ AK++D G+ K +A P + + APE +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK------WTAPEALREKK 190
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
S SDV+SFG++L E+ + GR P R K PR++ + + PD
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKM--DAPD---- 237
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
P ++M K C LD RP+ ++ + L I
Sbjct: 238 -GCPPAVYEVM----KNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 48/302 (15%)
Query: 219 ALEHATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLS 277
+L +A+D F ++GQG V + + D R A+K K + S L+EV +L+
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVMLLA 57
Query: 278 RLHHCHVVPLVGYCSEFRG---------KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW- 327
L+H +VV E R K++ + E+ N L D + E +N
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS---ENLNQQ 114
Query: 328 -DTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------- 379
D + L Y+H I+HRD+K NI +DE+ N KI D G+AK
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYA-MVGRASLMSDVFSFGVVLLELITGRQPI 436
+L + LP S + GT Y A E G + D++S G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----- 226
Query: 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA 496
+ G E + + R +V E P DF +M++ + + + DP+
Sbjct: 227 --PFSTGMERVNILKKLR-----SVSIEFP-----PDFDDNKMKVEKKIIRLLIDHDPNK 274
Query: 497 RP 498
RP
Sbjct: 275 RP 276
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 129
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 130 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 185
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 186 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 244 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 282
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 283 DCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 27/166 (16%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G +YLH R++HRD+K N+ L+E+L KI D G+A +++ DG + GT
Sbjct: 133 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-----ERKKTLCGT 184
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459
Y APE S DV+S G ++ L+ G+ P S K E L R++ +
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-ETYL------RIKKNE 237
Query: 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
I PK + A L ++ LQ DP ARPT++E++
Sbjct: 238 YSI------------PKHINPVAASLIQKMLQTDPTARPTINELLN 271
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 11 HCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 70
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 127
Query: 318 ----------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 128 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 184
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 185 NVVKICDFGLARDIYKDP-DXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 242 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 285
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 286 --DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEXMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + A +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 13 HCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 72
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL-------- 313
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL
Sbjct: 73 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 129
Query: 314 ------RDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
++ + + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 130 NEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 186
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 187 NVVKICDFGLARDIYKDP-DYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 243
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 244 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 287
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 288 --DCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 27/166 (16%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G +YLH R++HRD+K N+ L+E+L KI D G+A +++ DG + GT
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-----ERKKTLCGT 180
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459
Y APE S DV+S G ++ L+ G+ P S K E+ + R++ +
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYL-----RIKKNE 233
Query: 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
I PK + A L ++ LQ DP ARPT++E++
Sbjct: 234 YSI------------PKHINPVAASLIQKMLQTDPTARPTINELLN 267
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 27/166 (16%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G +YLH R++HRD+K N+ L+E+L KI D G+A +++ DG + GT
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-----ERKKTLCGT 180
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459
Y APE S DV+S G ++ L+ G+ P S K E L R++ +
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-ETYL------RIKKNE 233
Query: 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
I PK + A L ++ LQ DP ARPT++E++
Sbjct: 234 YSI------------PKHINPVAASLIQKMLQTDPTARPTINELLN 267
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+ + L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLGRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 11 HCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 70
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 127
Query: 318 ----------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 128 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 184
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 185 NVVKICDFGLARDIYKDP-DYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 242 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 285
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 286 --DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 36/298 (12%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQ----GGPNADSVFLTEVDMLSRLH 280
+K+ G +G+G VY+ Q G A+K+ + + G P S + E+ +L L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIP---STTIREISILKELK 58
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARG 340
H ++V L Y KR + LVFE + + +L+ LD V G+ T + + G
Sbjct: 59 HSNIVKL--YDVIHTKKRLV--LVFEHL-DQDLKKLLD-VCEGGLESVTAKSFLLQLLNG 112
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
+ Y H+ R+LHRD+K N+L++ KI D G+A +A G+P + + T
Sbjct: 113 IAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA---RAFGIPVRKYTHEVV--TL 164
Query: 401 GYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW---ATPRLQ 456
Y AP+ M + S D++S G + E++ G P+ +++ ++ + ++ TP +
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 457 DSGTVISELP--DPRLKGDFPKEEMQIMAYLAK-------ECLQLDPDARPTMSEVVQ 505
+ V +ELP DP P + L + + L+LDP+ R T + ++
Sbjct: 224 NWPNV-TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 36/298 (12%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQ----GGPNADSVFLTEVDMLSRLH 280
+K+ G +G+G VY+ Q G A+K+ + + G P S + E+ +L L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIP---STTIREISILKELK 58
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARG 340
H ++V L Y KR + LVFE + + +L+ LD V G+ T + + G
Sbjct: 59 HSNIVKL--YDVIHTKKRLV--LVFEHL-DQDLKKLLD-VCEGGLESVTAKSFLLQLLNG 112
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
+ Y H+ R+LHRD+K N+L++ KI D G+A +A G+P + + T
Sbjct: 113 IAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA---RAFGIPVRKYTHEIV--TL 164
Query: 401 GYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW---ATPRLQ 456
Y AP+ M + S D++S G + E++ G P+ +++ ++ + ++ TP +
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 457 DSGTVISELP--DPRLKGDFPKEEMQIMAYLAK-------ECLQLDPDARPTMSEVVQ 505
+ V +ELP DP P + L + + L+LDP+ R T + ++
Sbjct: 224 NWPNV-TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 36/298 (12%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSRLH 280
+K+ G +G+G VY+ Q G A+K+ + +G P S + E+ +L L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIP---STTIREISILKELK 58
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARG 340
H ++V L Y KR + LVFE + + +L+ LD V G+ T + + G
Sbjct: 59 HSNIVKL--YDVIHTKKRLV--LVFEHL-DQDLKKLLD-VCEGGLESVTAKSFLLQLLNG 112
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
+ Y H+ R+LHRD+K N+L++ KI D G+A +A G+P + + T
Sbjct: 113 IAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA---RAFGIPVRKYTHEVV--TL 164
Query: 401 GYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW---ATPRLQ 456
Y AP+ M + S D++S G + E++ G P+ +++ ++ + ++ TP +
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-APLFPGVSEADQLMRIFRILGTPNSK 223
Query: 457 DSGTVISELP--DPRLKGDFPKEEMQIMAYLAK-------ECLQLDPDARPTMSEVVQ 505
+ V +ELP DP P + L + + L+LDP+ R T + ++
Sbjct: 224 NWPNV-TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 134/305 (43%), Gaps = 50/305 (16%)
Query: 232 IVGQGGSSYVYRGQL-TDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPL 287
++G G V RG+L G+ VA+K K FL+E ++ + H +++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 288 VGYCSEFRGKRAMRLLVF-EFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
G + +M +++ EFM NG L L DG V + G A G+ Y
Sbjct: 81 EGVVTN-----SMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRY 131
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L E + +HRD+ + NIL++ NL K++D G+++ L+ + +S + +
Sbjct: 132 LAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462
APE + + SD +S+G+V+ E+++ G +P W QD I
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-------------YWDMSN-QDVINAI 234
Query: 463 SE---LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRN 519
+ LP P D P Q+M +C Q D +ARP +VV L DK R
Sbjct: 235 EQDYRLPPP---PDCPTSLHQLML----DCWQKDRNARPRFPQVVSAL-----DKMIRNP 282
Query: 520 ISLNL 524
SL +
Sbjct: 283 ASLKI 287
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 20/219 (9%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
E D F + +G G V + Q G I+A K + P + + E L L
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRE---LQVL 68
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIGA 337
H C+ +VG+ F + + + E M G+L D VL E + ++I
Sbjct: 69 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKEAKRIPEEILGKVSIAV 123
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
RGL YL E +I+HRD+K SNIL++ K+ D G++ +L + S ++S
Sbjct: 124 LRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANS---FV 174
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT Y APE S+ SD++S G+ L+EL GR PI
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 2 HCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 61
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 62 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVITEFCKFGNLSTYLRSKR 118
Query: 318 ----------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 119 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 175
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 176 NVVKICDFGLARDIYKDP-DYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 233 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 276
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 277 --DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 134/305 (43%), Gaps = 50/305 (16%)
Query: 232 IVGQGGSSYVYRGQL-TDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPL 287
++G G V RG+L G+ VA+K K FL+E ++ + H +++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 288 VGYCSEFRGKRAMRLLVF-EFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
G + +M +++ EFM NG L L DG V + G A G+ Y
Sbjct: 83 EGVVTN-----SMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRY 133
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L E + +HRD+ + NIL++ NL K++D G+++ L+ + +S + +
Sbjct: 134 LAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462
APE + + SD +S+G+V+ E+++ G +P W QD I
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-------------YWDMSN-QDVINAI 236
Query: 463 SE---LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRN 519
+ LP P D P Q+M +C Q D +ARP +VV L DK R
Sbjct: 237 EQDYRLPPP---PDCPTSLHQLML----DCWQKDRNARPRFPQVVSAL-----DKMIRNP 284
Query: 520 ISLNL 524
SL +
Sbjct: 285 ASLKI 289
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 27/166 (16%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G +YLH R++HRD+K N+ L+E+L KI D G+A +++ DG + GT
Sbjct: 151 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-----ERKKVLCGT 202
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459
Y APE S DV+S G ++ L+ G+ P S K E+ + R++ +
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYL-----RIKKNE 255
Query: 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
I PK + A L ++ LQ DP ARPT++E++
Sbjct: 256 YSI------------PKHINPVAASLIQKMLQTDPTARPTINELLN 289
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++ G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 76 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 127
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 128 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 179
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 180 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 237
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 238 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 280
Query: 515 SR 516
R
Sbjct: 281 QR 282
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 41/266 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E+M NG
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVT----KSKPVMIVTEYMENG 108
Query: 312 NLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
+L L DG V + G + G++YL + +HRD+ + NIL++ NL
Sbjct: 109 SLDTFLKKNDGQFTV----IQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNL 161
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
K++D G+++ L+ D P + + + + APE + + SDV+S+G+V+ E
Sbjct: 162 VCKVSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWE 219
Query: 429 LIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAY 484
+++ G +P W QD + E LP P D P Q+M
Sbjct: 220 VVSYGERP-------------YWEMTN-QDVIKAVEEGYRLPSPM---DCPAALYQLML- 261
Query: 485 LAKECLQLDPDARPTMSEVVQILSTI 510
+C Q + ++RP E+V +L +
Sbjct: 262 ---DCWQKERNSRPKFDEIVNMLDKL 284
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 233 VGQGGSSYVYRGQ--LTDGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLH---HCHVVP 286
+G+G V++ + GR VA+KR + Q G + + EV +L L H +VV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 287 LVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
L C+ R R +L LVFE + + +L LD V G+ +T + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
+ R++HRD+K NIL+ + K+ D G+A+ + S + + T Y AP
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTSVVVTLWYRAP 188
Query: 406 EYAMVGRASLMSDVFSFGVVLLELITGRQPIHR 438
E + + D++S G + E+ R+P+ R
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFR 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 27/166 (16%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G +YLH R++HRD+K N+ L+E+L KI D G+A +++ DG + GT
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-----ERKKVLCGT 204
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459
Y APE S DV+S G ++ L+ G+ P S K E+ + R++ +
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYL-----RIKKNE 257
Query: 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
I PK + A L ++ LQ DP ARPT++E++
Sbjct: 258 YSI------------PKHINPVAASLIQKMLQTDPTARPTINELLN 291
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 27/166 (16%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G +YLH R++HRD+K N+ L+E+L KI D G+A +++ DG + GT
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-----ERKKVLCGT 178
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459
Y APE S DV+S G ++ L+ G+ P S K E L R++ +
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-ETYL------RIKKNE 231
Query: 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
I PK + A L ++ LQ DP ARPT++E++
Sbjct: 232 YSI------------PKHINPVAASLIQKMLQTDPTARPTINELLN 265
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++ G VY+G + +G VA+K + P A+ L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 83 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 134
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 135 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 186
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 187 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 244
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 245 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 287
Query: 515 SR 516
R
Sbjct: 288 QR 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 121/279 (43%), Gaps = 37/279 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G+G V G G VAVK K A FL E ++++L H ++V L+G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
E +G +V E+M G+L D L + D + ++ +EYL
Sbjct: 76 EEKGGL---YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 129
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N+L+ E+ AK++D G+ K +A P + + APE
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK------WTAPEALREAA 181
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
S SDV+SFG++L E+ + GR P R K PR++ + + PD
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKM--DAPD---- 228
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
P ++M K C LD RP+ ++ + L I
Sbjct: 229 -GCPPAVYEVM----KNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 126/319 (39%), Gaps = 65/319 (20%)
Query: 227 FSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
F ++G GG V++ + DG+ ++R K EV L++L H ++V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-----REVKALAKLDHVNIV 68
Query: 286 PLVGYCSEF-------------------------RGKRAMRLLVFEFMPNGNLRDCLDGV 320
G F R K + EF G L ++
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 321 LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380
E ++ + + +G++Y+H + +++HRD+K SNI L + KI D G+
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSI 440
LK DG R +GT Y +PE D+++ G++L EL +H
Sbjct: 186 LKNDG------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL------LHVCD 233
Query: 441 TKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500
T E S ++L D + F K+E ++ L L P+ RP
Sbjct: 234 TAFETS-------------KFFTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNT 276
Query: 501 SEVVQILSTI--APDKSRR 517
SE+++ L+ +P+K+ R
Sbjct: 277 SEILRTLTVWKKSPEKNER 295
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 121/292 (41%), Gaps = 47/292 (16%)
Query: 233 VGQGGSSYVYRGQLTD---GRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+GQG VY G D G VAVK FL E ++ HVV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR--------VAIAIGAA 338
L+G S K L+V E M +G+L+ L + E N R + +A A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS---PAR 395
G+ YL+ A + +HRD+ + N ++ + KI D GM + + P R
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ APE G + SD++SFGVVL E+ + + ++ ++ E+ L +
Sbjct: 198 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF-----V 245
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
D G + D P + + L + C Q +P+ RPT E+V +L
Sbjct: 246 MDGGYL-----------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 50/325 (15%)
Query: 209 HGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRG------QLTDGRIVAVKRFKTQGG 262
H + + S E D+ +G+G V + R VAVK K
Sbjct: 48 HCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT 107
Query: 263 PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---- 317
+ ++E+ +L + HH +VV L+G C++ G +++ EF GNL L
Sbjct: 108 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKR 164
Query: 318 ----------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
+ + + + + + + A+G+E+L A+ + +HRD+ + NILL E
Sbjct: 165 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 221
Query: 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427
KI D G+A+ + D AR+ + APE ++ SDV+SFGV+L
Sbjct: 222 NVVKICDFGLARDIYKDP-DYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLW 278
Query: 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYL 485
E+ + + + EE R GT R++ D+ EM Q M
Sbjct: 279 EIFSLGASPYPGVKIDEEFC------RRLKEGT--------RMRAPDYTTPEMYQTML-- 322
Query: 486 AKECLQLDPDARPTMSEVVQILSTI 510
+C +P RPT SE+V+ L +
Sbjct: 323 --DCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+F ++G G VY+G + +G VA+ + P A+ L E +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL----DGVLVEGM-NWDTRVAIAI 335
+ HV L+G C + L+ + MP G L D + D + + + NW ++A
Sbjct: 110 NPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA--- 161
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+G+ YL + R++HRD+ + N+L+ + KITD G+AK L A+ +
Sbjct: 162 ---KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 213
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454
+ + A E + + SDV+S+GV + EL+T G +P + I E S +L R
Sbjct: 214 -KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGER 271
Query: 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514
LP P P + + + K C +D D+RP E++ S +A D
Sbjct: 272 ----------LPQP------PICTIDVYMIMVK-CWMIDADSRPKFRELIIEFSKMARDP 314
Query: 515 SR 516
R
Sbjct: 315 QR 316
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 128/286 (44%), Gaps = 58/286 (20%)
Query: 198 TTFCRSKT--WTIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAV 254
T FC+ K IH T+ + FS I+G+GG VY + D G++ A+
Sbjct: 172 TRFCQWKNVELNIHLTM------------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM 219
Query: 255 K-----RFKTQGGPNADSVFLTEVDMLSRLH--HCHVVPLVGYCSEFRGKRAMRLLVFEF 307
K R K + G +++ L E MLS + C + + Y K + + +
Sbjct: 220 KCLDKKRIKMKQG---ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS---FILDL 273
Query: 308 MPNGNLRDCL--DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365
M G+L L GV E D R A GLE++H +++RD+K +NILLD
Sbjct: 274 MNGGDLHYHLSQHGVFSEA---DMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLD 326
Query: 366 ENLNAKITDLGMAKRLKADGLPSCSSS---PARMQGTFGYFAPEYAMVGRASLMS-DVFS 421
E+ + +I+DLG+A C S P GT GY APE G A S D FS
Sbjct: 327 EHGHVRISDLGLA----------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 422 FGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467
G +L +L+ G P + TK + + R+ + T+ ELPD
Sbjct: 377 LGCMLFKLLRGHSPFRQHKTKDKHEI-----DRM--TLTMAVELPD 415
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 233 VGQGGSSYVYRGQ--LTDGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLH---HCHVVP 286
+G+G V++ + GR VA+KR + Q G + + EV +L L H +VV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 287 LVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
L C+ R R +L LVFE + + +L LD V G+ +T + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
+ R++HRD+K NIL+ + K+ D G+A+ + S + + T Y AP
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTSVVVTLWYRAP 188
Query: 406 EYAMVGRASLMSDVFSFGVVLLELITGRQPIHR 438
E + + D++S G + E+ R+P+ R
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFR 220
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 128/286 (44%), Gaps = 58/286 (20%)
Query: 198 TTFCRSKT--WTIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAV 254
T FC+ K IH T+ + FS I+G+GG VY + D G++ A+
Sbjct: 172 TRFCQWKNVELNIHLTM------------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM 219
Query: 255 K-----RFKTQGGPNADSVFLTEVDMLSRLH--HCHVVPLVGYCSEFRGKRAMRLLVFEF 307
K R K + G +++ L E MLS + C + + Y K + + +
Sbjct: 220 KCLDKKRIKMKQG---ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS---FILDL 273
Query: 308 MPNGNLRDCL--DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365
M G+L L GV E D R A GLE++H +++RD+K +NILLD
Sbjct: 274 MNGGDLHYHLSQHGVFSEA---DMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLD 326
Query: 366 ENLNAKITDLGMAKRLKADGLPSCSSS---PARMQGTFGYFAPEYAMVGRASLMS-DVFS 421
E+ + +I+DLG+A C S P GT GY APE G A S D FS
Sbjct: 327 EHGHVRISDLGLA----------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 422 FGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467
G +L +L+ G P + TK + + R+ + T+ ELPD
Sbjct: 377 LGCMLFKLLRGHSPFRQHKTKDKHEI-----DRM--TLTMAVELPD 415
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E M NG
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEXMENG 102
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 103 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 158
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 159 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 217 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 255
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 256 DCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 128/286 (44%), Gaps = 58/286 (20%)
Query: 198 TTFCRSKT--WTIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAV 254
T FC+ K IH T+ + FS I+G+GG VY + D G++ A+
Sbjct: 172 TRFCQWKNVELNIHLTM------------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM 219
Query: 255 K-----RFKTQGGPNADSVFLTEVDMLSRLH--HCHVVPLVGYCSEFRGKRAMRLLVFEF 307
K R K + G +++ L E MLS + C + + Y K + + +
Sbjct: 220 KCLDKKRIKMKQG---ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS---FILDL 273
Query: 308 MPNGNLRDCL--DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365
M G+L L GV E D R A GLE++H +++RD+K +NILLD
Sbjct: 274 MNGGDLHYHLSQHGVFSEA---DMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLD 326
Query: 366 ENLNAKITDLGMAKRLKADGLPSCSSS---PARMQGTFGYFAPEYAMVGRASLMS-DVFS 421
E+ + +I+DLG+A C S P GT GY APE G A S D FS
Sbjct: 327 EHGHVRISDLGLA----------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 422 FGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467
G +L +L+ G P + TK + + R+ + T+ ELPD
Sbjct: 377 LGCMLFKLLRGHSPFRQHKTKDKHEI-----DRM--TLTMAVELPD 415
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 128/286 (44%), Gaps = 58/286 (20%)
Query: 198 TTFCRSKT--WTIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAV 254
T FC+ K IH T+ + FS I+G+GG VY + D G++ A+
Sbjct: 171 TRFCQWKNVELNIHLTM------------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM 218
Query: 255 K-----RFKTQGGPNADSVFLTEVDMLSRLH--HCHVVPLVGYCSEFRGKRAMRLLVFEF 307
K R K + G +++ L E MLS + C + + Y K + + +
Sbjct: 219 KCLDKKRIKMKQG---ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS---FILDL 272
Query: 308 MPNGNLRDCL--DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365
M G+L L GV E D R A GLE++H +++RD+K +NILLD
Sbjct: 273 MNGGDLHYHLSQHGVFSEA---DMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLD 325
Query: 366 ENLNAKITDLGMAKRLKADGLPSCSSS---PARMQGTFGYFAPEYAMVGRASLMS-DVFS 421
E+ + +I+DLG+A C S P GT GY APE G A S D FS
Sbjct: 326 EHGHVRISDLGLA----------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 375
Query: 422 FGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467
G +L +L+ G P + TK + + R+ + T+ ELPD
Sbjct: 376 LGCMLFKLLRGHSPFRQHKTKDKHEI-----DRM--TLTMAVELPD 414
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 127/288 (44%), Gaps = 27/288 (9%)
Query: 220 LEHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR 278
+E D F + +G G V++ G ++A K + P + + E L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQV 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIG 336
LH C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIA 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L S
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSF 163
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE S+ SD++S G+ L+E+ GR PI K E+S A L
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK-EDSRPPMAIFELL 222
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
D +++E P P+L E Q +CL +P R + +++
Sbjct: 223 D--YIVNE-PPPKLPSGVFSLEFQ---DFVNKCLIKNPAERADLKQLM 264
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 117/266 (43%), Gaps = 41/266 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +VV L G + RGK M +V EFM NG
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVT--RGKPVM--IVIEFMENG 129
Query: 312 NLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
L L DG V + G A G+ YL + +HRD+ + NIL++ NL
Sbjct: 130 ALDAFLRKHDGQFTV----IQLVGMLRGIAAGMRYLADMG---YVHRDLAARNILVNSNL 182
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428
K++D G+++ ++ D P + + + APE + + SDV+S+G+V+ E
Sbjct: 183 VCKVSDFGLSRVIEDD--PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWE 240
Query: 429 LIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAY 484
+++ G +P W QD I E LP P D P Q+M
Sbjct: 241 VMSYGERP-------------YWDMSN-QDVIKAIEEGYRLPAPM---DCPAGLHQLML- 282
Query: 485 LAKECLQLDPDARPTMSEVVQILSTI 510
+C Q + RP ++V IL +
Sbjct: 283 ---DCWQKERAERPKFEQIVGILDKM 305
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 37/283 (13%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV 284
K++ +GQG S VY + G+ VA+++ Q P + + + E+ ++ + ++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-LIINEILVMRENKNPNI 80
Query: 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGAARGLEY 343
V Y + + +V E++ G+L D V+ E M+ A+ + LE+
Sbjct: 81 V---NYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEGQIAAVCRECLQALEF 132
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
LH + +++HRDIKS NILL + + K+TD G ++ + S + M GT +
Sbjct: 133 LH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSXMVGTPYWM 184
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQP-IHRSITKGEESLVLWATPRLQDSGTVI 462
APE D++S G++ +E+I G P ++ + + + TP LQ+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN----- 239
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P++ I CL++D + R + E++Q
Sbjct: 240 ------------PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVK--RFKTQGGPNADSVFLTEVDMLSR 278
H +D++ I+G GG S V+ + L R VAVK R P+ F E +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGA 337
L+H +V + + +V E++ LRD V EG M + + A
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEVIADA 125
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+ L + H+ I+HRD+K +NI++ K+ D G+A+ + G + + A +
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG--NSVTQTAAVI 180
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
GT Y +PE A SDV+S G VL E++TG P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 233 VGQGGSSYVYRGQ--LTDGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLH---HCHVVP 286
+G+G V++ + GR VA+KR + Q G + + EV +L L H +VV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 287 LVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
L C+ R R +L LVFE + + +L LD V G+ +T + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
+ R++HRD+K NIL+ + K+ D G+A+ + S + + T Y AP
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTSVVVTLWYRAP 188
Query: 406 EYAMVGRASLMSDVFSFGVVLLELITGRQPIHR 438
E + + D++S G + E+ R+P+ R
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFR 220
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 236 GGSSY--VYRGQLTDGRI-VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
GG Y VY G + VAVK K + FL E ++ + H ++V L+G C+
Sbjct: 41 GGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+V E+MP GNL D L E + + +A + +EYL +
Sbjct: 99 ----LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NF 151
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N L+ EN K+ D G+++ + D + + + ++ T APE
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNT 207
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
S+ SDV++FGV+L E+ T G P G +S++ D K
Sbjct: 208 FSIKSDVWAFGVLLWEIATYGMSPY---------------------PGIDLSQVYDLLEK 246
Query: 472 G---DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
G + P+ + L + C + P RP+ +E Q T+ D
Sbjct: 247 GYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHD 291
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 120/292 (41%), Gaps = 47/292 (16%)
Query: 233 VGQGGSSYVYRGQLTD---GRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+GQG VY G D G VAVK FL E ++ HVV
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR--------VAIAIGAA 338
L+G S K L+V E M +G+L+ L + E N R + +A A
Sbjct: 82 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS---PAR 395
G+ YL+ A + +HRD+ + N ++ + KI D GM + + P R
Sbjct: 138 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ APE G + SD++SFGVVL E+ + + ++ ++ E+ L +
Sbjct: 195 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF-----V 242
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
D G + D P + + L + C Q +P RPT E+V +L
Sbjct: 243 MDGGYL-----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 120/292 (41%), Gaps = 47/292 (16%)
Query: 233 VGQGGSSYVYRGQLTD---GRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+GQG VY G D G VAVK FL E ++ HVV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR--------VAIAIGAA 338
L+G S K L+V E M +G+L+ L + E N R + +A A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS---PAR 395
G+ YL+ A + +HRD+ + N ++ + KI D GM + + P R
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ APE G + SD++SFGVVL E+ + + ++ ++ E+ L +
Sbjct: 198 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF-----V 245
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
D G + D P + + L + C Q +P RPT E+V +L
Sbjct: 246 MDGGYL-----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 41/289 (14%)
Query: 232 IVGQGGSSYVYRGQLT-DGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPL 287
++G G V G L G+ VA+K K+ FL+E ++ + H +V+ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 288 VGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEYL 344
G + K +++ EFM NG+L L DG V + G A G++YL
Sbjct: 74 EGVVT----KSTPVMIITEFMENGSLDSFLRQNDGQFTV----IQLVGMLRGIAAGMKYL 125
Query: 345 HEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
A +HR + + NIL++ NL K++D G+++ L+ D +S + + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 405 PEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
PE + + SDV+S+G+V+ E+++ + + +T QD I +
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-------------QDVINAIEQ 229
Query: 465 ---LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
LP P D P Q+M +C Q D + RP ++V L +
Sbjct: 230 DYRLPPPM---DCPSALHQLML----DCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 120/292 (41%), Gaps = 47/292 (16%)
Query: 233 VGQGGSSYVYRGQLTD---GRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+GQG VY G D G VAVK FL E ++ HVV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR--------VAIAIGAA 338
L+G S K L+V E M +G+L+ L + E N R + +A A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS---PAR 395
G+ YL+ A + +HRD+ + N ++ + KI D GM + + P R
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ APE G + SD++SFGVVL E+ + + ++ ++ E+ L +
Sbjct: 198 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF-----V 245
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
D G + D P + + L + C Q +P RPT E+V +L
Sbjct: 246 MDGGYL-----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVK--RFKTQGGPNADSVFLTEVDMLSR 278
H +D++ I+G GG S V+ + L R VAVK R P+ F E +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGA 337
L+H +V + + +V E++ LRD V EG M + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEVIADA 125
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+ L + H+ I+HRD+K +NI++ K+ D G+A+ + G + + A +
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG--NSVTQTAAVI 180
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
GT Y +PE A SDV+S G VL E++TG P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 35/263 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL E ++ + H +++ L G + K ++V E M NG
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEXMENG 131
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371
+L L + V + G A G++YL + +HRD+ + NIL++ NL K
Sbjct: 132 SLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
++D G+++ L+ D P + + + + +PE + + SDV+S+G+VL E+++
Sbjct: 188 VSDFGLSRVLEDD--PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 432 -GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAK 487
G +P W QD + E LP P D P Q+M
Sbjct: 246 YGERP-------------YWEMSN-QDVIKAVDEGYRLPPPM---DCPAALYQLML---- 284
Query: 488 ECLQLDPDARPTMSEVVQILSTI 510
+C Q D + RP ++V IL +
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 37/283 (13%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV 284
K++ +GQG S VY + G+ VA+++ Q P + + + E+ ++ + ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-LIINEILVMRENKNPNI 79
Query: 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGAARGLEY 343
V Y + + +V E++ G+L D V+ E M+ A+ + LE+
Sbjct: 80 V---NYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEGQIAAVCRECLQALEF 131
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
LH + +++HRDIKS NILL + + K+TD G ++ + S + M GT +
Sbjct: 132 LH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSXMVGTPYWM 183
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQP-IHRSITKGEESLVLWATPRLQDSGTVI 462
APE D++S G++ +E+I G P ++ + + + TP LQ+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN----- 238
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P++ I CL++D + R + E++Q
Sbjct: 239 ------------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 122/297 (41%), Gaps = 57/297 (19%)
Query: 233 VGQGGSSYVYRGQLTD---GRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+GQG VY G D G VAVK FL E ++ HVV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR--------VAIAIGAA 338
L+G S K L+V E M +G+L+ L + E N R + +A A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK--------RLKADGLPSCS 390
G+ YL+ A + +HRD+ + N ++ + KI D GM + R GL
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL---- 193
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
P R + APE G + SD++SFGVVL E+ + + ++ ++ E+ L
Sbjct: 194 -LPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF- 244
Query: 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
+ D G + D P + + L + C Q +P RPT E+V +L
Sbjct: 245 ----VMDGGYL-----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 47/269 (17%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL+E ++ + H +++ L G ++ + +++ E+M NG
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV----MIITEYMENG 115
Query: 312 NLRDCLDGVLVEGMNWDTR------VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365
+L D L + D R V + G G++YL + +A +HRD+ + NIL++
Sbjct: 116 SL----DAFLRKN---DGRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVN 165
Query: 366 ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVV 425
NL K++D GM++ L+ D P + + + + APE + + SDV+S+G+V
Sbjct: 166 SNLVCKVSDFGMSRVLEDD--PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 223
Query: 426 LLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQI 481
+ E+++ G +P W QD I E LP P D P Q+
Sbjct: 224 MWEVMSYGERP-------------YWDMSN-QDVIKAIEEGYRLPPPM---DCPIALHQL 266
Query: 482 MAYLAKECLQLDPDARPTMSEVVQILSTI 510
M +C Q + RP ++V +L +
Sbjct: 267 ML----DCWQKERSDRPKFGQIVNMLDKL 291
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 37/283 (13%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV 284
K++ +GQG S VY + G+ VA+++ Q P + + + E+ ++ + ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-LIINEILVMRENKNPNI 79
Query: 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGAARGLEY 343
V Y + + +V E++ G+L D V+ E M+ A+ + LE+
Sbjct: 80 V---NYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEGQIAAVCRECLQALEF 131
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
LH + +++HRDIKS NILL + + K+TD G ++ + S + M GT +
Sbjct: 132 LH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSEMVGTPYWM 183
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQP-IHRSITKGEESLVLWATPRLQDSGTVI 462
APE D++S G++ +E+I G P ++ + + + TP LQ+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN----- 238
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P++ I CL +D + R + E++Q
Sbjct: 239 ------------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 122/297 (41%), Gaps = 57/297 (19%)
Query: 233 VGQGGSSYVYRGQLTD---GRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+GQG VY G D G VAVK FL E ++ HVV
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR--------VAIAIGAA 338
L+G S K L+V E M +G+L+ L + E N R + +A A
Sbjct: 84 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK--------RLKADGLPSCS 390
G+ YL+ A + +HRD+ + N ++ + KI D GM + R GL
Sbjct: 140 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL---- 192
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
P R + APE G + SD++SFGVVL E+ + + ++ ++ E+ L
Sbjct: 193 -LPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF- 243
Query: 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
+ D G + D P + + L + C Q +P RPT E+V +L
Sbjct: 244 ----VMDGGYL-----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 37/227 (16%)
Query: 233 VGQGGSSYVYRGQL------TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G+ VY+G L + VA+K K + F E + +RL H +VV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL--------------DGVLVEGMNWDTRVA 332
L+G + K ++F + +G+L + L D + + V
Sbjct: 94 LLGVVT----KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 333 IAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG---LPSC 389
+ A G+EYL ++ ++H+D+ + N+L+ + LN KI+DLG+ + + A L
Sbjct: 150 LVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQP 435
S P R + APE M G+ S+ SD++S+GVVL E+ + G QP
Sbjct: 207 SLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 56
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+D +D + G+ +
Sbjct: 57 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 165
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 224 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 132/300 (44%), Gaps = 52/300 (17%)
Query: 231 NIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
++G G VY+G + DG VA+K + P A+ L E +++ + +V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD---GVL--VEGMNWDTRVAIAIGAARG 340
L+G C + LV + MP G L D + G L + +NW ++A +G
Sbjct: 83 RLLGICLT-----STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIA------KG 131
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
+ YL + R++HRD+ + N+L+ + KITD G+A+ L D + +
Sbjct: 132 MSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG---KVPI 185
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSG 459
+ A E + R + SDV+S+GV + EL+T G +P G
Sbjct: 186 KWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPY---------------------DG 224
Query: 460 TVISELPDPRLKGD-FPKEEM-QIMAYLAK-ECLQLDPDARPTMSEVVQILSTIAPDKSR 516
E+PD KG+ P+ + I Y+ +C +D + RP E+V S +A D R
Sbjct: 225 IPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQR 284
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVK--RFKTQGGPNADSVFLTEVDMLSR 278
H +D++ I+G GG S V+ + L R VAVK R P+ F E +
Sbjct: 26 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGA 337
L+H +V + + +V E++ LRD V EG M + + A
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEVIADA 142
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+ L + H+ I+HRD+K +NI++ K+ D G+A+ + G + + A +
Sbjct: 143 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG--NSVTQTAAVI 197
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
GT Y +PE A SDV+S G VL E++TG P
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 37/227 (16%)
Query: 233 VGQGGSSYVYRGQL------TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G+ VY+G L + VA+K K + F E + +RL H +VV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL--------------DGVLVEGMNWDTRVA 332
L+G + K ++F + +G+L + L D + + V
Sbjct: 77 LLGVVT----KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 333 IAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG---LPSC 389
+ A G+EYL ++ ++H+D+ + N+L+ + LN KI+DLG+ + + A L
Sbjct: 133 LVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQP 435
S P R + APE M G+ S+ SD++S+GVVL E+ + G QP
Sbjct: 190 SLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 37/283 (13%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV 284
K++ +GQG S VY + G+ VA+++ Q P + + + E+ ++ + ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-LIINEILVMRENKNPNI 79
Query: 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGAARGLEY 343
V Y + + +V E++ G+L D V+ E M+ A+ + LE+
Sbjct: 80 V---NYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEGQIAAVCRECLQALEF 131
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
LH + +++HRDIKS NILL + + K+TD G ++ + S + M GT +
Sbjct: 132 LH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSTMVGTPYWM 183
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQP-IHRSITKGEESLVLWATPRLQDSGTVI 462
APE D++S G++ +E+I G P ++ + + + TP LQ+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN----- 238
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P++ I CL +D + R + E++Q
Sbjct: 239 ------------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 126/301 (41%), Gaps = 34/301 (11%)
Query: 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
I +G V++ QL + VAVK F Q + S E ++ S H L
Sbjct: 21 EIKARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQS----EREIFSTPGMKHENLLQFI 75
Query: 291 CSEFRGK--RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-- 346
+E RG L+ F G+L D L G ++ W+ +A +RGL YLHE
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNII---TWNELCHVAETMSRGLSYLHEDV 132
Query: 347 ------AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
P I HRD KS N+LL +L A + D G+A R + P + GT
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTR 189
Query: 401 GYFAPEYA-----MVGRASLMSDVFSFGVVLLELIT----GRQPIHRSITKGEESLVLWA 451
Y APE A L D+++ G+VL EL++ P+ + EE +
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIG--Q 247
Query: 452 TPRLQD-SGTVISELPDPRLKGDFPKEE-MQIMAYLAKECLQLDPDARPTMSEVVQILST 509
P L++ V+ + P +K + K + + +EC D +AR + V + +S
Sbjct: 248 HPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVSL 307
Query: 510 I 510
I
Sbjct: 308 I 308
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 220 LEHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR 278
+E D F + +G G V++ G ++A K + P + + E L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQV 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIG 336
LH C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIA 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L S
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSF 163
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT Y +PE S+ SD++S G+ L+E+ GR PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 220 LEHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR 278
+E D F + +G G V++ G ++A K + P + + E L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQV 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIG 336
LH C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIA 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L S
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSF 163
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT Y +PE S+ SD++S G+ L+E+ GR PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 123/297 (41%), Gaps = 57/297 (19%)
Query: 233 VGQGGSSYVYRGQLTD---GRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+GQG VY G D G VAVK FL E ++ HVV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR--------VAIAIGAA 338
L+G S K L+V E M +G+L+ L + E N R + +A A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK--------RLKADGLPSCS 390
G+ YL+ A + +HR++ + N ++ + KI D GM + R GL
Sbjct: 141 DGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL---- 193
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
P R + APE G + SD++SFGVVL E+ + + ++ ++ E+ L
Sbjct: 194 -LPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF- 244
Query: 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
+ D G + D P + + L + C Q +P+ RPT E+V +L
Sbjct: 245 ----VMDGGYL-----------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 123/297 (41%), Gaps = 57/297 (19%)
Query: 233 VGQGGSSYVYRGQLTD---GRI---VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+GQG VY G D G VAVK FL E ++ HVV
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR--------VAIAIGAA 338
L+G S K L+V E M +G+L+ L + E N R + +A A
Sbjct: 86 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK--------RLKADGLPSCS 390
G+ YL+ A + +HR++ + N ++ + KI D GM + R GL
Sbjct: 142 DGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL---- 194
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
P R + APE G + SD++SFGVVL E+ + + ++ ++ E+ L
Sbjct: 195 -LPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKF- 245
Query: 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
+ D G + D P + + L + C Q +P+ RPT E+V +L
Sbjct: 246 ----VMDGGYL-----------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 220 LEHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR 278
+E D F + +G G V++ G ++A K + P + + E L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQV 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIG 336
LH C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIA 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L S
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSF 163
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT Y +PE S+ SD++S G+ L+E+ GR PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 220 LEHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR 278
+E D F + +G G V++ G ++A K + P + + E L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQV 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIG 336
LH C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIA 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L S
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSF 163
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT Y +PE S+ SD++S G+ L+E+ GR PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 37/283 (13%)
Query: 226 KFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV 284
K++ +GQG S VY + G+ VA+++ Q P + + + E+ ++ + ++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-LIINEILVMRENKNPNI 80
Query: 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGAARGLEY 343
V Y + + +V E++ G+L D V+ E M+ A+ + LE+
Sbjct: 81 V---NYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEGQIAAVCRECLQALEF 132
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
LH + +++HR+IKS NILL + + K+TD G ++ + S + M GT +
Sbjct: 133 LH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSTMVGTPYWM 184
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQP-IHRSITKGEESLVLWATPRLQDSGTVI 462
APE D++S G++ +E+I G P ++ + + + TP LQ+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN----- 239
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P++ I CL++D + R + E++Q
Sbjct: 240 ------------PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 127/290 (43%), Gaps = 30/290 (10%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+GG SYV + L DG A+KR + + E DM +H +++ LV YC
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA-QREADMHRLFNHPNILRLVAYC 95
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG--MNWDTRVAIAIGAARGLEYLHEAAA 349
RG + L+ F G L + ++ + +G + D + + +G RGLE +H A
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---A 152
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKR--LKADGLPSCSS--SPARMQGTFGYFAP 405
HRD+K +NILL + + DLG + + +G + A + T Y AP
Sbjct: 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
Query: 406 EYAMVGRASLM---SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462
E V ++ +DV+S G VL ++ G P KG +S+ L V
Sbjct: 213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVAL----------AVQ 261
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAP 512
++L P+ P+ + L + +DP RP + ++ L + P
Sbjct: 262 NQLSIPQ----SPRHSSALWQ-LLNSMMTVDPHQRPHIPLLLSQLEALQP 306
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 58
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+D +D + G+ +
Sbjct: 59 KELNHPNIVKLLDVIH----TENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQ 113
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 167
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 271
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL+E ++ + H +++ L G ++ + +++ E+M NG
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV----MIITEYMENG 94
Query: 312 NLRDCLDGVLVEGMNWDTR------VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365
+L D L + D R V + G G++YL + + +HRD+ + NIL++
Sbjct: 95 SL----DAFLRKN---DGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVN 144
Query: 366 ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVV 425
NL K++D GM++ L+ D P + + + + APE + + SDV+S+G+V
Sbjct: 145 SNLVCKVSDFGMSRVLEDD--PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 202
Query: 426 LLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQI 481
+ E+++ G +P W QD I E LP P D P Q+
Sbjct: 203 MWEVMSYGERP-------------YWDMSN-QDVIKAIEEGYRLPPPM---DCPIALHQL 245
Query: 482 MAYLAKECLQLDPDARPTMSEVVQILSTI 510
M +C Q + RP ++V +L +
Sbjct: 246 ML----DCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G + VAVK K G + FL E +++ L H +V L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP--GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDG-----VLVEGMNWDTRVAIAIGAARGLEYLHEA 347
+ ++ E+M G+L D L VL+ + + + A G+ Y+
Sbjct: 79 ----REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK 129
Query: 348 AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEY 407
+HRD++++N+L+ E+L KI D G+A+ ++ + + + ++ T APE
Sbjct: 130 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEA 182
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQP 435
G ++ SDV+SFG++L E++T G+ P
Sbjct: 183 INFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
E D F + +G G V++ G ++A K + P + + E L L
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQVL 120
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIGA 337
H C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIAV 175
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L S
Sbjct: 176 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSFV 226
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT Y +PE S+ SD++S G+ L+E+ GR PI
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ G + VAVK K G + FL E +++ L H +V L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP--GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDG-----VLVEGMNWDTRVAIAIGAARGLEYLHEA 347
K ++ EFM G+L D L VL+ + + + A G+ Y+
Sbjct: 78 ----KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK 128
Query: 348 AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEY 407
+HRD++++N+L+ E+L KI D G+A+ ++ + + + ++ T APE
Sbjct: 129 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEA 181
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQP 435
G ++ S+V+SFG++L E++T G+ P
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 49/302 (16%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM + +
Sbjct: 121 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 386 LPSCSSS---PARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITK 442
P R + +PE G + SDV+SFGVVL E+ T + ++ ++
Sbjct: 178 XXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 231
Query: 443 GEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSE 502
E+ L R G ++ D P ++ L + C Q +P RP+ E
Sbjct: 232 -EQVL------RFVMEGGLL----------DKPDNCPDMLLELMRMCWQYNPKMRPSFLE 274
Query: 503 VV 504
++
Sbjct: 275 II 276
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 40/290 (13%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLT--DGRIV--AVKRFKTQGGPNAD-SVFLTEVDMLSRLH 280
+F+ ++G+G V QL DG V AVK K ++D FL E +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 281 HCHVVPLVGYC--SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE----GMNWDTRVAIA 334
H HV LVG S +G+ + +++ FM +G+L L + + T V
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL--PSCSSS 392
+ A G+EYL ++ +HRD+ + N +L E++ + D G+++++ + C+S
Sbjct: 144 VDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 393 -PARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451
P + + A E ++ SDV++FGV + E++T Q + I E L
Sbjct: 201 LPVK------WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254
Query: 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS 501
RL+ P E M+ + L +C DP RP+ +
Sbjct: 255 GNRLKQ-----------------PPECMEEVYDLMYQCWSADPKQRPSFT 287
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VA+K K FL+E ++ + H +++ L G ++ + +++ E+M NG
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV----MIITEYMENG 100
Query: 312 NLRDCLDGVLVEGMNWDTR------VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365
+L D L + D R V + G G++YL + + +HRD+ + NIL++
Sbjct: 101 SL----DAFLRKN---DGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVN 150
Query: 366 ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVV 425
NL K++D GM++ L+ D P + + + + APE + + SDV+S+G+V
Sbjct: 151 SNLVCKVSDFGMSRVLEDD--PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 208
Query: 426 LLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE---LPDPRLKGDFPKEEMQI 481
+ E+++ G +P W QD I E LP P D P Q+
Sbjct: 209 MWEVMSYGERP-------------YWDMSN-QDVIKAIEEGYRLPPPM---DCPIALHQL 251
Query: 482 MAYLAKECLQLDPDARPTMSEVVQILSTI 510
M +C Q + RP ++V +L +
Sbjct: 252 ML----DCWQKERSDRPKFGQIVNMLDKL 276
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 59
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+D +D + G+ +
Sbjct: 60 KELNHPNIVKLLDVIH----TENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 168
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 227 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 272
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
E D F + +G G V++ G ++A K + P + + E L L
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQVL 85
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIGA 337
H C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIAV 140
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L S
Sbjct: 141 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSFV 191
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT Y +PE S+ SD++S G+ L+E+ GR PI
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRF---KTQGGPNADSVF---LTEVDMLSR 278
D ++G+G VY+G L D R VAVK F Q N +++ L E D ++R
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
+VG R LLV E+ PNG+L L + +W + +A
Sbjct: 72 F-------IVGDERVTADGRMEYLLVMEYYPNGSLXKYLS---LHTSDWVSSCRLAHSVT 121
Query: 339 RGLEYLH------EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL--PSCS 390
RGL YLH + P I HRD+ S N+L+ + I+D G++ RL + L P
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 391 SSPARMQ-GTFGYFAPEYAMVGRASLMS--------DVFSFGVVLLELI 430
+ A + GT Y APE + G +L D+++ G++ E+
Sbjct: 182 DNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 116/282 (41%), Gaps = 40/282 (14%)
Query: 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G V++ + G ++AVK+ + G + L ++D++ + H C P + C
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC---PYIVQC 89
Query: 292 SEFRGKRAMRLLVFEFMPN--GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
+ E M L+ + G + E + VAI + L YL E
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIV----KALYYLKEKHG 145
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEY-- 407
++HRD+K SNILLDE K+ D G++ RL D + R G Y APE
Sbjct: 146 --VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD------KAKDRSAGCAAYMAPERID 197
Query: 408 ---AMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEE-SLVLWATPRLQDSGTVIS 463
+ +DV+S G+ L+EL TG+ P T E + VL P L S
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFS 257
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
GDF K+CL D RP +++++
Sbjct: 258 --------GDF--------QSFVKDCLTKDHRKRPKYNKLLE 283
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 270 LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDT 329
+ E +L+++H +V L Y E + LV M G++R + V + +
Sbjct: 233 MVEKKILAKVHSRFIVSLA-YAFE---TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 330 RVAIAIGA--ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387
AI A GLE+LH+ I++RD+K N+LLD++ N +I+DLG+A LKA
Sbjct: 289 PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---- 341
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ GT G+ APE + D F+ GV L E+I R P
Sbjct: 342 -GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 17/217 (7%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHH 281
D F ++G+GG V+ Q+ G++ A K+ + + E +L+++H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA--AR 339
+V L Y E + LV M G++R + V + + AI A
Sbjct: 245 RFIVSLA-YAFE---TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
GLE+LH+ I++RD+K N+LLD++ N +I+DLG+A LKA + GT
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-----QTKTKGYAGT 352
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
G+ APE + D F+ GV L E+I R P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 33/287 (11%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
E D F + +G G V++ G ++A K + P + + E L L
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQVL 77
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIGA 337
H C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIAV 132
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L S
Sbjct: 133 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSFV 183
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y +PE S+ SD++S G+ L+E+ GR P I G S+ ++ L D
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP----IGSGSGSMAIF---ELLD 236
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+++E P P+L E Q +CL +P R + +++
Sbjct: 237 --YIVNE-PPPKLPSGVFSLEFQ---DFVNKCLIKNPAERADLKQLM 277
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 49/302 (16%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM + +
Sbjct: 130 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
Query: 386 LPSCSSS---PARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITK 442
P R + +PE G + SDV+SFGVVL E+ T + ++ ++
Sbjct: 187 XXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240
Query: 443 GEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSE 502
E+ L R G ++ D P ++ L + C Q +P RP+ E
Sbjct: 241 -EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLE 283
Query: 503 VV 504
++
Sbjct: 284 II 285
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 48/302 (15%)
Query: 219 ALEHATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLS 277
+L +A+D F ++GQG V + + D R A+K K + S L+EV +L+
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVXLLA 57
Query: 278 RLHHCHVVPLVGYCSEFRG---------KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW- 327
L+H +VV E R K++ + E+ N L D + E +N
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS---ENLNQQ 114
Query: 328 -DTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------- 379
D + L Y+H I+HR++K NI +DE+ N KI D G+AK
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYA-MVGRASLMSDVFSFGVVLLELITGRQPI 436
+L + LP S + GT Y A E G + D +S G++ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY----- 226
Query: 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA 496
+ G E + + R +V E P DF + ++ + + + DP+
Sbjct: 227 --PFSTGXERVNILKKLR-----SVSIEFP-----PDFDDNKXKVEKKIIRLLIDHDPNK 274
Query: 497 RP 498
RP
Sbjct: 275 RP 276
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 270 LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDT 329
+ E +L+++H +V L Y E + LV M G++R + V + +
Sbjct: 233 MVEKKILAKVHSRFIVSLA-YAFE---TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 330 RVAIAIGA--ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387
AI A GLE+LH+ I++RD+K N+LLD++ N +I+DLG+A LKA
Sbjct: 289 PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---- 341
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ GT G+ APE + D F+ GV L E+I R P
Sbjct: 342 -GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 58
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 59 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 165
Query: 399 TFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + + S D++S G + E++T R Q T G
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 270 LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDT 329
+ E +L+++H +V L Y E + LV M G++R + V + +
Sbjct: 233 MVEKKILAKVHSRFIVSLA-YAFE---TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 330 RVAIAIGA--ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387
AI A GLE+LH+ I++RD+K N+LLD++ N +I+DLG+A LKA
Sbjct: 289 PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---- 341
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ GT G+ APE + D F+ GV L E+I R P
Sbjct: 342 -GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 58
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 59 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 114 QGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 165
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 58
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 59 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 165
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 164
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 268
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 59/307 (19%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------ 379
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM +
Sbjct: 130 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
R GL P R + +PE G + SDV+SFGVVL E+ T + +
Sbjct: 187 YYRKGGKGL-----LPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+ ++ E+ L R G ++ D P ++ L + C Q +P R
Sbjct: 236 QGLSN-EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMR 278
Query: 498 PTMSEVV 504
P+ E++
Sbjct: 279 PSFLEII 285
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ E+ GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN KI D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDXXKKTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ E+ GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN KI D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 65
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 66 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 172
Query: 399 TFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + + S D++S G + E++T R Q T G
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 233 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 276
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 59/307 (19%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------ 379
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM +
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
R GL P R + +PE G + SDV+SFGVVL E+ T + +
Sbjct: 180 YYRKGGKGL-----LPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+ ++ E+ L R G ++ D P ++ L + C Q +P R
Sbjct: 229 QGLSN-EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMR 271
Query: 498 PTMSEVV 504
P+ E++
Sbjct: 272 PSFLEII 278
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ E+ GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN KI D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDYYKNTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ E+ GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN KI D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDXXKKTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 164
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 268
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 59/307 (19%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------ 379
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM +
Sbjct: 129 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
R GL P R + +PE G + SDV+SFGVVL E+ T + +
Sbjct: 186 YYRKGGKGL-----LPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+ ++ E+ L R G ++ D P ++ L + C Q +P R
Sbjct: 235 QGLSN-EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMR 277
Query: 498 PTMSEVV 504
P+ E++
Sbjct: 278 PSFLEII 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 59/307 (19%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------ 379
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM +
Sbjct: 129 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
R GL P R + +PE G + SDV+SFGVVL E+ T + +
Sbjct: 186 YYRKGGKGL-----LPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+ ++ E+ L R G ++ D P ++ L + C Q +P R
Sbjct: 235 QGLSN-EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMR 277
Query: 498 PTMSEVV 504
P+ E++
Sbjct: 278 PSFLEII 284
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 49/302 (16%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 70
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM + +
Sbjct: 127 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 386 LPSCSSS---PARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITK 442
P R + +PE G + SDV+SFGVVL E+ T + ++ ++
Sbjct: 184 YYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 237
Query: 443 GEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSE 502
E+ L R G ++ D P ++ L + C Q +P RP+ E
Sbjct: 238 -EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLE 280
Query: 503 VV 504
++
Sbjct: 281 II 282
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 57
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV 166
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 270
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 58
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 59 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 165
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 42/288 (14%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 118
Query: 311 GNLRDCLDGVLVEGMNW--------------DTRVAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 119 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 175
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-GRL--PVKWMAPEALFDRIYTHQ 232
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 281
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRNISLNL 524
+ ++C P RPT ++V+ L I S + + L++
Sbjct: 282 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSM 323
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ E+ GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN KI D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 114
Query: 311 GNLRDCL--------------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L + V E M + V+ ARG+EYL A+ + +HRD
Sbjct: 115 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 171
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ EN KI D G+A+ + +++ R+ + APE +
Sbjct: 172 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQ 228
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV++ E+ T + I E +L R+ +EL
Sbjct: 229 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNEL----------- 277
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ ++C P RPT ++V+ L I
Sbjct: 278 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ E+ GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN KI D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ VAVK K G + FL E +++ L H +V L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP--GSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ EFM G+L D L + + A G+ ++ +
Sbjct: 81 -----KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 132
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ +L KI D G+A+ ++ + + + ++ T APE G
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGS 188
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+SFG++L+E++T GR P + ++ E R + G +P P
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIP-YPGMSNPE-------VIRALERGY---RMPRPE-- 235
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
+ P+E IM C + P+ RPT + +L
Sbjct: 236 -NCPEELYNIMM----RCWKNRPEERPTFEYIQSVL 266
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 117
Query: 311 GNLRDCL--------------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L + V E M + V+ ARG+EYL A+ + +HRD
Sbjct: 118 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 174
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ EN KI D G+A+ + +++ R+ + APE +
Sbjct: 175 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQ 231
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV++ E+ T + I E +L R+ +EL
Sbjct: 232 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNEL----------- 280
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ ++C P RPT ++V+ L I
Sbjct: 281 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 49/284 (17%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ VAVK K G + FL E +++ L H +V L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKP--GSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ EFM G+L D L + + A G+ ++ +
Sbjct: 254 -----KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 305
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ +L KI D G+A+ ++ + + + ++ T APE G
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGS 361
Query: 413 ASLMSDVFSFGVVLLELIT-GRQP--------IHRSITKGEESLVLWATPRLQDSGTVIS 463
++ SDV+SFG++L+E++T GR P + R++ +G
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-------------------Y 402
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
+P P + P+E IM C + P+ RPT + +L
Sbjct: 403 RMPRPE---NCPEELYNIMM----RCWKNRPEERPTFEYIQSVL 439
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 112
Query: 311 GNLRDCL--------------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L + V E M + V+ ARG+EYL A+ + +HRD
Sbjct: 113 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 169
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ EN KI D G+A+ + +++ R+ + APE +
Sbjct: 170 LTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQ 226
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV++ E+ T + I E +L R+ +EL
Sbjct: 227 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNEL----------- 275
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ ++C P RPT ++V+ L I
Sbjct: 276 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 62
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 63 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 169
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 230 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 273
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 56
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 57 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 165
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 224 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 65
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 66 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 172
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 233 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 276
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 49/302 (16%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 101
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM + +
Sbjct: 158 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
Query: 386 LPSCSSS---PARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITK 442
P R + +PE G + SDV+SFGVVL E+ T + ++ ++
Sbjct: 215 YYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 268
Query: 443 GEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSE 502
E+ L R G ++ D P ++ L + C Q +P RP+ E
Sbjct: 269 -EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLE 311
Query: 503 VV 504
++
Sbjct: 312 II 313
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 59/307 (19%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------ 379
+ +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM +
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
R GL P R + +PE G + SDV+SFGVVL E+ T + +
Sbjct: 193 YYRKGGKGL-----LPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+ ++ E+ L R G ++ D P ++ L + C Q +P R
Sbjct: 242 QGLSN-EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMR 284
Query: 498 PTMSEVV 504
P+ E++
Sbjct: 285 PSFLEII 291
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 42/288 (14%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 118
Query: 311 GNLRDCLDGVLVEGMNWDTR--------------VAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 119 GNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 175
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN-GRL--PVKWMAPEALFDRIYTHQ 232
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 281
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRNISLNL 524
+ ++C P RPT ++V+ L I S + + L++
Sbjct: 282 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEXLDLSM 323
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 56
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 57 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 165
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 224 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 58
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 59 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 167
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 271
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLH 280
AT ++ +G G VY+ + G VA+K + G + + EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 281 ---HCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
H +VV L+ C+ R R +++ LVFE + + +LR LD G+ +T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
RGL++LH I+HRD+K NIL+ K+ D G+A+ + S + A +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALAPV 171
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
T Y APE + + D++S G + E+ R+P+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 171
Query: 311 GNLRDCL--------------DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L + V E M + V+ ARG+EYL A+ + +HRD
Sbjct: 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 228
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ EN KI D G+A+ + +++ R+ + APE +
Sbjct: 229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQ 285
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV++ E+ T + I E +L R+ +EL
Sbjct: 286 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNEL----------- 334
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ ++C P RPT ++V+ L I
Sbjct: 335 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 56
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 57 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 165
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 224 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV-- 164
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 268
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 58
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 59 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 167
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 271
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 57
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 166
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 270
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 57
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 166
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 270
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 56
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 57 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H + R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 165
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 224 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 59
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 60 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 168
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 227 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 272
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 59
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 60 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 168
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 227 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 272
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 58
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 59 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 167
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 271
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 107
Query: 311 GNLRDCLDGVLVEGMNWDTR--------------VAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 108 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 164
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 165 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-GRL--PVKWMAPEALFDRIYTHQ 221
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 222 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 270
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+ ++C P RPT ++V+ L I
Sbjct: 271 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 59
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 60 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV-- 166
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 227 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 270
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 36/204 (17%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VAVK K P+ L+E ++L +++H HV+ L G CS+ LL+ E+ G
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ----DGPLLLIVEYAKYG 111
Query: 312 NLRDCLDGVLVEGMNW---------------DTR-------VAIAIGAARGLEYLHEAAA 349
+LR L G + D R ++ A ++G++YL E
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-- 169
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEY 407
+++HRD+ + NIL+ E KI+D G+++ + + S R QG + A E
Sbjct: 170 -KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-----DSXVKRSQGRIPVKWMAIES 223
Query: 408 AMVGRASLMSDVFSFGVVLLELIT 431
+ SDV+SFGV+L E++T
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV-- 164
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 268
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 38/276 (13%)
Query: 233 VGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVG 289
+G+G V++G D R +VA+K + + E+ +LS+ +V
Sbjct: 31 IGKGSFGEVFKG--IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKY-- 86
Query: 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
Y S +G + ++ E++ G+ D L + T + + +GL+YLH +
Sbjct: 87 YGSYLKGSKLW--IIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLH---S 138
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
+ +HRDIK++N+LL E + K+ D G+A +L + + GT + APE
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-----FVGTPFWMAPEVIQ 193
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
+D++S G+ +EL G P + VL+ P+ P
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGEPP----NSDMHPMRVLFLIPKNN----------PPT 239
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
L GDF K + + CL DP RPT E+++
Sbjct: 240 LVGDFTKSFKEFI----DACLNKDPSFRPTAKELLK 271
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 60
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 61 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 169
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 228 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 273
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 110
Query: 311 GNLRDCLDGVLVEGMNWDTR--------------VAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 111 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 167
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 168 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-GRL--PVKWMAPEALFDRIYTHQ 224
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 225 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 273
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ ++C P RPT ++V+ L I
Sbjct: 274 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 127/307 (41%), Gaps = 59/307 (19%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN------- 326
++ + HVV L+G S+ + L++ E M G+L+ L + E N
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 327 -WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------ 379
+ +A A G+ YL+ A + +HRD+ + N + E+ KI D GM +
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
R GL P R + +PE G + SDV+SFGVVL E+ T + +
Sbjct: 180 YYRKGGKGL-----LPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+ ++ E+ L R G ++ D P ++ L + C Q +P R
Sbjct: 229 QGLSN-EQVL------RFVMEGGLL----------DKPDNCPDMLLELMRMCWQYNPKMR 271
Query: 498 PTMSEVV 504
P+ E++
Sbjct: 272 PSFLEII 278
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 36/288 (12%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V G+ VAVK K G ++ F E + +L H +V G CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE--GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
K +V E++ NG L + L +G+ + + G+ +L + +
Sbjct: 74 ----KEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFL---ESHQF 125
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N L+D +L K++D GM + + D S + ++ + APE +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS----APEVFHYFK 181
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
S SDV++FG+++ E+ + G+ P + T E L + RL P L
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMP-YDLYTNSEVVLKVSQGHRLY----------RPHLA 230
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRN 519
D QIM C P+ RPT Q+LS+I P + + ++
Sbjct: 231 SD---TIYQIMY----SCWHELPEKRPTFQ---QLLSSIEPLREKDKH 268
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 111
Query: 311 GNLRDCLDGVLVEGMNWDTR--------------VAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 112 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 168
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 169 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-GRL--PVKWMAPEALFDRIYTHQ 225
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 226 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 274
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+ ++C P RPT ++V+ L I
Sbjct: 275 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 59
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 60 KELNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQ 114
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 168
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 227 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 272
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 36/204 (17%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VAVK K P+ L+E ++L +++H HV+ L G CS+ LL+ E+ G
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ----DGPLLLIVEYAKYG 111
Query: 312 NLRDCLDGVLVEGMNW---------------DTR-------VAIAIGAARGLEYLHEAAA 349
+LR L G + D R ++ A ++G++YL E
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-- 169
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEY 407
+++HRD+ + NIL+ E KI+D G+++ + + S R QG + A E
Sbjct: 170 -KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-----DSYVKRSQGRIPVKWMAIES 223
Query: 408 AMVGRASLMSDVFSFGVVLLELIT 431
+ SDV+SFGV+L E++T
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 127/305 (41%), Gaps = 45/305 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
VG+G V+RG L G VAVK F ++ + S F TE+ L H +++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSR---DEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH-----E 346
R L+ + +G+L D L +E + +A+ AA GL +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACGLAHLHVEIFGT 128
Query: 347 AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPE 406
P I HRD KS N+L+ NL I DLG+A + + G GT Y APE
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAV-MHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 407 Y------AMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL---VLWATPRLQD 457
+ +D+++FG+VL E+ R+ I I + V+ P +D
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDYRPPFYDVVPNDPSFED 245
Query: 458 SGTVI---SELP--------DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506
V+ + P DP L G +A + +EC +P AR T + +
Sbjct: 246 MKKVVCVDQQTPTIPNRLAADPVLSG---------LAQMMRECWYPNPSARLTALRIKKT 296
Query: 507 LSTIA 511
L I+
Sbjct: 297 LQKIS 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 118
Query: 311 GNLRDCLDGVLVEGMNWDTR--------------VAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 119 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 175
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-GRL--PVKWMAPEALFDRIYTHQ 232
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 281
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ ++C P RPT ++V+ L I
Sbjct: 282 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 129/313 (41%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ E+ GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN +I D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 36/204 (17%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
VAVK K P+ L+E ++L +++H HV+ L G CS+ LL+ E+ G
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ----DGPLLLIVEYAKYG 111
Query: 312 NLRDCLDGVLVEGMNW---------------DTR-------VAIAIGAARGLEYLHEAAA 349
+LR L G + D R ++ A ++G++YL E +
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS- 170
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEY 407
++HRD+ + NIL+ E KI+D G+++ + + S R QG + A E
Sbjct: 171 --LVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-----DSXVKRSQGRIPVKWMAIES 223
Query: 408 AMVGRASLMSDVFSFGVVLLELIT 431
+ SDV+SFGV+L E++T
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 103
Query: 311 GNLRDCLDGVLVEGMNW--------------DTRVAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 104 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 160
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-GRL--PVKWMAPEALFDRIYTHQ 217
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 218 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 266
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+ ++C P RPT ++V+ L I
Sbjct: 267 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 46/277 (16%)
Query: 232 IVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVF----LTEVDMLSRLHHCHVVP 286
++G+G VY G+ L++ +A+K P DS + E+ + L H ++V
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEI-----PERDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR---GLEY 343
+G SE + E +P G+L L G D I + GL+Y
Sbjct: 84 YLGSFSE----NGFIKIFMEQVPGGSLSALLRSKW--GPLKDNEQTIGFYTKQILEGLKY 137
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGY 402
LH+ +I+HRDIK N+L++ KI+D G +KRL G+ C+ + GT Y
Sbjct: 138 LHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTET---FTGTLQY 189
Query: 403 FAPEYAMVGRASL--MSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460
APE G +D++S G ++E+ TG+ P + GE ++ +
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL---GEPQAAMFKVGMFK---- 242
Query: 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
V E+P+ + A++ K C + DPD R
Sbjct: 243 VHPEIPESM--------SAEAKAFILK-CFEPDPDKR 270
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 159
Query: 311 GNLRDCLDGVLVEGMNWDTR--------------VAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 216
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-GRL--PVKWMAPEALFDRIYTHQ 273
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 274 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 322
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
+ ++C P RPT ++V+ L I
Sbjct: 323 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 57
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 KELNHPNIVKLLDVIH----TENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 166
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 270
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ S ++E++M+ + H +++ L+G C++ ++ E+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ----DGPLYVIVEYASK 118
Query: 311 GNLRDCLDGVLVEGMNWDTR--------------VAIAIGAARGLEYLHEAAAPRILHRD 356
GNLR+ L G+ + V+ A ARG+EYL A+ + +HRD
Sbjct: 119 GNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 175
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+L+ E+ KI D G+A+ + +++ R+ + APE +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-GRL--PVKWMAPEALFDRIYTHQ 232
Query: 417 SDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPK 476
SDV+SFGV+L E+ T + + E +L R+ +EL
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL----------- 281
Query: 477 EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ ++C P RPT ++V+ L I
Sbjct: 282 ------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 265 ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG 324
+++ L E +L +++ VV L + K A+ LV M G+L+ + + G
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLA---YAYETKDAL-CLVLTLMNGGDLKFHIYHMGQAG 282
Query: 325 MNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384
V A GLE LH RI++RD+K NILLD++ + +I+DLG+A
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVH---- 335
Query: 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITK 442
+P + R+ GT GY APE R + D ++ G +L E+I G+ P + K
Sbjct: 336 -VPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 59
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 60 KELNHPNIVKLLDVIH----TENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 168
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 227 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 272
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 265 ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG 324
+++ L E +L +++ VV L + K A+ LV M G+L+ + + G
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLA---YAYETKDAL-CLVLTLMNGGDLKFHIYHMGQAG 282
Query: 325 MNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384
V A GLE LH RI++RD+K NILLD++ + +I+DLG+A
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVH---- 335
Query: 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITK 442
+P + R+ GT GY APE R + D ++ G +L E+I G+ P + K
Sbjct: 336 -VPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 49/306 (16%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHC 282
+K+ +G+G V++ + D G+IVA+K+F +++ P + L E+ ML +L H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 283 HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD----GV---LVEGMNWDTRVAIAI 335
++V L+ FR KR + L VFE+ + L + LD GV LV+ + W T A+
Sbjct: 63 NLVNLL---EVFRRKRRLHL-VFEYCDHTVLHE-LDRYQRGVPEHLVKSITWQTLQAV-- 115
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+ H+ +HRD+K NIL+ ++ K+ D G A+ L S
Sbjct: 116 ------NFCHKHNC---IHRDVKPENILITKHSVIKLCDFGFARLLTGP-----SDYYDD 161
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPIHRSITKGEESLVLWAT- 452
T Y +PE +VG DV++ G V EL++G P+ + ++ ++ T
Sbjct: 162 EVATRWYRSPE-LLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTL 219
Query: 453 ----PRLQDSGTVIS-----ELPDPR----LKGDFPKEEMQIMAYLAKECLQLDPDARPT 499
PR Q + ++PDP L+ FP + L K CL +DP R T
Sbjct: 220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALG-LLKGCLHMDPTERLT 278
Query: 500 MSEVVQ 505
+++
Sbjct: 279 CEQLLH 284
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG CL + + ++D TR A
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNG----CLLKYIRKIGSFDETCTRFYTA-EI 141
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + + ++S
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS---FV 195
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE AS SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 250
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 33/299 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G+G V+ G+ G VAVK F T A TE+ + H +++ +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTT--EEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-----A 347
+ G L+ ++ NG+L D L ++ + + +A + GL +LH
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKSTTLDA---KSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 348 AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEY 407
P I HRD+KS NIL+ +N I DLG+A + +D P GT Y PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT-NEVDIPPNTRVGTKRYMPPEV 217
Query: 408 AMVG------RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL----VLWATPRLQD 457
++ +M+D++SFG++L E+ R+ + I + E L ++ + P +D
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVE-EYQLPYHDLVPSDPSYED 274
Query: 458 SGTVISELPDPRLKGDFPK-----EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511
++ +L+ FP E ++ M L EC +P +R T V + L+ ++
Sbjct: 275 MREIVC---IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 59/307 (19%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 69
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL--------DGVLVEGM 325
++ + HVV L+G S+ + L++ E M G+L+ L + ++
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 326 NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------ 379
+ + +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM +
Sbjct: 126 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
R GL P R + +PE G + SDV+SFGVVL E+ T + +
Sbjct: 183 YYRKGGKGL-----LPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 231
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+ ++ E+ L R G ++ D P ++ L + C Q +P R
Sbjct: 232 QGLSN-EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMR 274
Query: 498 PTMSEVV 504
P+ E++
Sbjct: 275 PSFLEII 281
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 19/228 (8%)
Query: 218 SALEHATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDML 276
SAL F +VG G VY+G+ + G++ A+K G + + E++ML
Sbjct: 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINML 74
Query: 277 SRL-HHCHVVPLVGYCSEFR--GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAI 333
+ HH ++ G + G LV EF G++ D + + + I
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134
Query: 334 AIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSP 393
RGL +LH+ +++HRDIK N+LL EN K+ D G++ +L
Sbjct: 135 CREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD-----RTVGRR 186
Query: 394 ARMQGTFGYFAPEYAMVGR-----ASLMSDVFSFGVVLLELITGRQPI 436
GT + APE SD++S G+ +E+ G P+
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+ + + T+G P S + E+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVP---STAIREISLLKE 58
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 59 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 165
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 226 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 269
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+ + + T+G P S + E+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVP---STAIREISLLKE 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFEF+ + +L+ +D + G+ +
Sbjct: 58 LNHPNIVKLLDVIH----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 164
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 268
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 116/280 (41%), Gaps = 39/280 (13%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHH 281
D F +G+G V Q D ++ A+K Q + V E+ ++ L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGL 341
LV F+ + M +V + + G+LR L + +T L
Sbjct: 75 PF---LVNLWYSFQDEEDM-FMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMAL 128
Query: 342 EYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFG 401
+YL RI+HRD+K NILLDE+ + ITD +A L + + M GT
Sbjct: 129 DYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE------TQITTMAGTKP 179
Query: 402 YFAPEYAMVGRA---SLMSDVFSFGVVLLELITGRQPIH-RSITKGEESLVLWATPRLQD 457
Y APE + S D +S GV EL+ GR+P H RS T +E + + T
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET----- 234
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
TV++ +P Q M L K+ L+ +PD R
Sbjct: 235 --TVVT----------YPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 59/307 (19%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRI-------VAVKRFKTQGGPNADSVFLTEV 273
E A +K + S +GQG VY G + G + VA+K FL E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL--------DGVLVEGM 325
++ + HVV L+G S+ + L++ E M G+L+ L + ++
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPT----LVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 326 NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------ 379
+ + +A A G+ YL+ A + +HRD+ + N ++ E+ KI D GM +
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 380 --RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
R GL P R + +PE G + SDV+SFGVVL E+ T + +
Sbjct: 193 YYRKGGKGL-----LPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+ ++ E+ L R G ++ D P ++ L + C Q +P R
Sbjct: 242 QGLSN-EQVL------RFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMR 284
Query: 498 PTMSEVV 504
P+ E++
Sbjct: 285 PSFLEII 291
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 128/313 (40%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ + GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ----DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN KI D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
E D F + +G G V++ G ++A K + P + + E L L
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE---LQVL 61
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV--AIAIGA 337
H C+ +VG+ F + + + E M G+L D VL + ++ ++I
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL----DQVLKKAGRIPEQILGKVSIAV 116
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
+GL YL E +I+HRD+K SNIL++ K+ D G++ +L
Sbjct: 117 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDEMANEFV 167
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
GT Y +PE S+ SD++S G+ L+E+ GR P
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 27/166 (16%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+G++YLH R++HRD+K N+ L+++++ KI D G+A +++ DG + G
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-----ERKKXLCG 204
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458
T Y APE S D++S G +L L+ G+ P S K E+ + R++ +
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK--ETYI-----RIKKN 257
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P+ + + L + L DP RP+++E++
Sbjct: 258 EYSV------------PRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 46/277 (16%)
Query: 232 IVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVF----LTEVDMLSRLHHCHVVP 286
++G+G VY G+ L++ +A+K P DS + E+ + L H ++V
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEI-----PERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR---GLEY 343
+G SE + E +P G+L L G D I + GL+Y
Sbjct: 70 YLGSFSE----NGFIKIFMEQVPGGSLSALLRSKW--GPLKDNEQTIGFYTKQILEGLKY 123
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGY 402
LH+ +I+HRDIK N+L++ KI+D G +KRL G+ C+ + GT Y
Sbjct: 124 LHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTET---FTGTLQY 175
Query: 403 FAPEYAMVGRASL--MSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460
APE G +D++S G ++E+ TG+ P + GE ++ +
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL---GEPQAAMFKVGMFK---- 228
Query: 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
V E+P+ + A++ K C + DPD R
Sbjct: 229 VHPEIPESM--------SAEAKAFILK-CFEPDPDKR 256
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 25/238 (10%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGAA 338
V L +C + K L + NG L + + ++D TR A
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGL---SYAKNGELLKYIRKI----GSFDETCTRFYTA-EIV 147
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S + G
Sbjct: 148 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFVG 201
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
T Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 255
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 44/285 (15%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRFKT----QGGPNADSVFLTEVDMLSRLHHCHVVPL 287
+G+G S VYR L DG VA+K+ + AD + E+D+L +L+H +V+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLLKQLNHPNVI-- 95
Query: 288 VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDG------VLVEGMNWDTRVAIAIGAARGL 341
Y + F + + V E G+L + ++ E W V + L
Sbjct: 96 -KYYASFIEDNELNI-VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC----SAL 149
Query: 342 EYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFG 401
E++H + R++HRDIK +N+ + K+ DLG+ + S +++ + GT
Sbjct: 150 EHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-----SKTTAAHSLVGTPY 201
Query: 402 YFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461
Y +PE + SD++S G +L E+ + P + + + L++ +
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY------GDKMNLYSLCK------K 249
Query: 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506
I + P L D EE++ L C+ DP+ RP ++ V +
Sbjct: 250 IEQCDYPPLPSDHYSEELR---QLVNMCINPDPEKRPDVTYVYDV 291
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 27/166 (16%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+G++YLH R++HRD+K N+ L+++++ KI D G+A +++ DG + G
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-----ERKKTLCG 204
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458
T Y APE S D++S G +L L+ G+ P S K E+ + R++ +
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK--ETYI-----RIKKN 257
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P+ + + L + L DP RP+++E++
Sbjct: 258 EYSV------------PRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 27/166 (16%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+G++YLH R++HRD+K N+ L+++++ KI D G+A +++ DG + G
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-----ERKKDLCG 188
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458
T Y APE S D++S G +L L+ G+ P S K E+ + R++ +
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK--ETYI-----RIKKN 241
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P+ + + L + L DP RP+++E++
Sbjct: 242 EYSV------------PRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLH 280
AT ++ +G G VY+ + G VA+K + G + + EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 281 ---HCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
H +VV L+ C+ R R +++ LVFE + + +LR LD G+ +T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
RGL++LH I+HRD+K NIL+ K+ D G+A+ + S + +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALDPV 171
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
T Y APE + + D++S G + E+ R+P+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 128/313 (40%), Gaps = 50/313 (15%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTE 272
E DK + +G+G V + + VAVK K S ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 273 VDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-------------- 317
++M+ + H +++ L+G C++ ++ + GNLR+ L
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ----DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDI 146
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
+ V E M + V+ ARG+EYL A+ + +HRD+ + N+L+ EN KI D G+
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
A+ + +++ R+ + APE + SDV+SFGV++ E+ T +
Sbjct: 204 ARDINNIDYYKKTTN-GRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
I E +L R+ +EL + ++C P R
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNEL-----------------YMMMRDCWHAVPSQR 303
Query: 498 PTMSEVVQILSTI 510
PT ++V+ L I
Sbjct: 304 PTFKQLVEDLDRI 316
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 58/303 (19%)
Query: 231 NIVGQGGSSYVYRG-QLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
++G G V++G + +G V +K + + G + + + L H H+V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD---GVLVEGM--NWDTRVAIAIGAARG 340
L+G C + LV +++P G+L D + G L + NW ++A +G
Sbjct: 97 RLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA------KG 145
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG---LPSCSSSPARMQ 397
+ YL E ++HR++ + N+LL ++ D G+A L D L S + +P +
Sbjct: 146 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK-- 200
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQ 456
+ A E G+ + SDV+S+GV + EL+T G +P
Sbjct: 201 ----WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY-------------------- 236
Query: 457 DSGTVISELPDPRLKGDFPKEEM--QIMAYLAK-ECLQLDPDARPTMSEVVQILSTIAPD 513
+G ++E+PD KG+ + I Y+ +C +D + RPT E+ + +A D
Sbjct: 237 -AGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 295
Query: 514 KSR 516
R
Sbjct: 296 PPR 298
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 27/166 (16%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+G++YLH R++HRD+K N+ L+++++ KI D G+A +++ DG + G
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-----ERKKDLCG 204
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458
T Y APE S D++S G +L L+ G+ P S K E+ + R++ +
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK--ETYI-----RIKKN 257
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ P+ + + L + L DP RP+++E++
Sbjct: 258 EYSV------------PRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 44/285 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
F+ +G+G V++G D R +VA+K + + E+ +LS+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 284 VVPLVG-YCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVLVEGMNWDTRVA-IAIGAARG 340
V G Y K ++ E++ G+ D L+ G L E T++A I +G
Sbjct: 67 VTKYYGSYL-----KDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKG 116
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L+YLH + + +HRDIK++N+LL E+ K+ D G+A +L + + GT
Sbjct: 117 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-----FVGTP 168
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460
+ APE +D++S G+ +EL G +P H + + VL+ P+
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHPMK---VLFLIPKNN---- 220
Query: 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P L+G++ K + + CL +P RPT E+++
Sbjct: 221 ------PPTLEGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 53/277 (19%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
V +K + + G + + + L H H+V L+G C + LV +++P G
Sbjct: 45 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYLPLG 99
Query: 312 NLRDCLD---GVLVEGM--NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366
+L D + G L + NW ++A +G+ YL E ++HR++ + N+LL
Sbjct: 100 SLLDHVRQHRGALGPQLLLNWGVQIA------KGMYYLEEHG---MVHRNLAARNVLLKS 150
Query: 367 NLNAKITDLGMAKRLKADG---LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFG 423
++ D G+A L D L S + +P + + A E G+ + SDV+S+G
Sbjct: 151 PSQVQVADFGVADLLPPDDKQLLYSEAKTPIK------WMALESIHFGKYTHQSDVWSYG 204
Query: 424 VVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEM--Q 480
V + EL+T G +P +G ++E+PD KG+ +
Sbjct: 205 VTVWELMTFGAEPY---------------------AGLRLAEVPDLLEKGERLAQPQICT 243
Query: 481 IMAYLAK-ECLQLDPDARPTMSEVVQILSTIAPDKSR 516
I Y+ +C +D + RPT E+ + +A D R
Sbjct: 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPR 280
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 227 FSGSNIVGQG--GSSYVYRG--QLTDGRIVAVKRFKTQGGPNADSVFLT-EVDMLSRLHH 281
F ++GQG G ++ R + G + A+K K D V E D+L+ ++H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-ARG 340
VV L Y + GK L+ +F+ G+L L E M + V + A G
Sbjct: 90 PFVVKL-HYAFQTEGKL---YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALG 142
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L++LH I++RD+K NILLDE + K+TD G++K + S GT
Sbjct: 143 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-----GTV 194
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451
Y APE S +D +S+GV++ E++TG P K +L+L A
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLH 280
AT ++ +G G VY+ + G VA+K + G + + EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 281 ---HCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
H +VV L+ C+ R R +++ LVFE + + +LR LD G+ +T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
RGL++LH I+HRD+K NIL+ K+ D G+A+ + S + +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALFPV 171
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
T Y APE + + D++S G + E+ R+P+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 28/215 (13%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFK----TQGGPNADSVFLTEVDMLSRLH 280
++ + +G+G + VY+ + + +IVA+K+ K ++ + L E+ +L L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARG 340
H +++ G F G ++ LVF+FM D LV + A + +G
Sbjct: 71 HPNII---GLLDAF-GHKSNISLVFDFMETDLEVIIKDNSLV--LTPSHIKAYMLMTLQG 124
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG-- 398
LEYLH+ ILHRD+K +N+LLDEN K+ D G+AK SP R
Sbjct: 125 LEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF---------GSPNRAYXHQ 172
Query: 399 --TFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELI 430
T Y APE R + D+++ G +L EL+
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 230 SNIVGQGGSSYVYRGQLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ I+G+G VY G T+ + VAVK K + F++E ++ L H H+V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
L+G E ++ E P G L L+ + T V ++ + + YL
Sbjct: 73 KLIGIIEE-----EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE 126
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
+HRDI NIL+ K+ D G+++ ++ + S + ++ + +P
Sbjct: 127 SINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK----WMSP 179
Query: 406 EYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
E R + SDV+ F V + E+++ G+QP W ++ VI
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQPF------------FWL-----ENKDVIGV 222
Query: 465 LPDPRLKGD-FPKEEM--QIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L KGD PK ++ ++ L C DP RP +E+V LS +
Sbjct: 223 LE----KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 230 SNIVGQGGSSYVYRGQLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ I+G+G VY G T+ + VAVK K + F++E ++ L H H+V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
L+G E ++ E P G L L+ + T V ++ + + YL
Sbjct: 89 KLIGIIEE-----EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE 142
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
+HRDI NIL+ K+ D G+++ ++ + S + ++ + +P
Sbjct: 143 SINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK----WMSP 195
Query: 406 EYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
E R + SDV+ F V + E+++ G+QP W ++ VI
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQPF------------FWL-----ENKDVIGV 238
Query: 465 LPDPRLKGD-FPKEEM--QIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L KGD PK ++ ++ L C DP RP +E+V LS +
Sbjct: 239 LE----KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 230 SNIVGQGGSSYVYRGQLTDGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
+ I+G+G VY G T+ + VAVK K + F++E ++ L H H+V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
L+G E ++ E P G L L+ + T V ++ + + YL
Sbjct: 77 KLIGIIEE-----EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE 130
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
+HRDI NIL+ K+ D G+++ ++ + S + ++ + +P
Sbjct: 131 SINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK----WMSP 183
Query: 406 EYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
E R + SDV+ F V + E+++ G+QP W ++ VI
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQPF------------FWL-----ENKDVIGV 226
Query: 465 LPDPRLKGD-FPKEEM--QIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L KGD PK ++ ++ L C DP RP +E+V LS +
Sbjct: 227 LE----KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 44/285 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
F+ +G+G V++G D R +VA+K + + E+ +LS+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 284 VVPLVG-YCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVLVEGMNWDTRVA-IAIGAARG 340
V G Y K ++ E++ G+ D L+ G L E T++A I +G
Sbjct: 87 VTKYYGSYL-----KDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKG 136
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L+YLH + + +HRDIK++N+LL E+ K+ D G+A +L + + GT
Sbjct: 137 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-----FVGTP 188
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460
+ APE +D++S G+ +EL G +P H + + VL+ P+
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHPMK---VLFLIPKNN---- 240
Query: 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P L+G++ K + + CL +P RPT E+++
Sbjct: 241 ------PPTLEGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 275
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 45/216 (20%)
Query: 251 IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
+VAVK K + + + F E +++ + ++V L+G C+ GK L+FE+M
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV--GKPM--CLLFEYMAY 134
Query: 311 GNLRDCLDGVLVEGM------NWDTR----------------VAIAIGAARGLEYLHEAA 348
G+L + L + + + TR + IA A G+ YL E
Sbjct: 135 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER- 193
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRL------KADGLPSCSSSPARMQGTFGY 402
+ +HRD+ + N L+ EN+ KI D G+++ + KADG + P R +
Sbjct: 194 --KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADG---NDAIPIR------W 242
Query: 403 FAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIH 437
PE R + SDV+++GVVL E+ + G QP +
Sbjct: 243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 34/265 (12%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA---MRLLVF 305
G+I+AVKR ++ L ++D++ R C + + Y + FR M L+
Sbjct: 47 GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI-VQFYGALFREGDCWICMELMST 105
Query: 306 EFMP-NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364
F + LD V+ E + I + + L +L E +I+HRDIK SNILL
Sbjct: 106 SFDKFYKYVYSVLDDVIPE----EILGKITLATVKALNHLKENL--KIIHRDIKPSNILL 159
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEY----AMVGRASLMSDVF 420
D + N K+ D G++ +L S + R G Y APE A + SDV+
Sbjct: 160 DRSGNIKLCDFGISGQLVD------SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVW 213
Query: 421 SFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQ 480
S G+ L EL TGR P + W + + D T + + P+L +E
Sbjct: 214 SLGITLYELATGRFPYPK-----------WNS--VFDQLTQVVKGDPPQLSNSEEREFSP 260
Query: 481 IMAYLAKECLQLDPDARPTMSEVVQ 505
CL D RP E+++
Sbjct: 261 SFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 44/285 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
F+ +G+G V++G D R +VA+K + + E+ +LS+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 284 VVPLVG-YCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVLVEGMNWDTRVAIAIGAA-RG 340
V G Y K ++ E++ G+ D L+ G L E T++A + +G
Sbjct: 82 VTKYYGSYL-----KDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKG 131
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L+YLH + + +HRDIK++N+LL E+ K+ D G+A +L + GT
Sbjct: 132 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-----FVGTP 183
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460
+ APE +D++S G+ +EL G +P H + + VL+ P+
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHPMK---VLFLIPKNN---- 235
Query: 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P L+G++ K + + CL +P RPT E+++
Sbjct: 236 ------PPTLEGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 233 VGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G VY+ G+IVA+K+ + + E+ ++ + HVV Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE---IIKEISIMQQCDSPHVVKY--YG 91
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
S F K +V E+ G++ D + + L E D I +GLEYLH
Sbjct: 92 SYF--KNTDLWIVMEYCGAGSVSDIIRLRNKTLTE----DEIATILQSTLKGLEYLHFM- 144
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
R +HRDIK+ NILL+ +AK+ D G+A +L D + + + GT + APE
Sbjct: 145 --RKIHRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNX----VIGTPFWMAPEVI 197
Query: 409 MVGRASLMSDVFSFGVVLLELITGRQP 435
+ ++D++S G+ +E+ G+ P
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 252 VAVKRFKTQGGPNADSV-FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VA+K K QG AD+ + E ++ +L + ++V L+G C + +LV E
Sbjct: 40 VAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-----QAEALMLVMEMAGG 93
Query: 311 GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNA 370
G L L G E + + + G++YL E +HRD+ + N+LL A
Sbjct: 94 GPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYA 149
Query: 371 KITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLE 428
KI+D G++K L AD S AR G + ++APE + S SDV+S+GV + E
Sbjct: 150 KISDFGLSKALGADD----SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
Query: 429 LIT-GRQPIHRSITKGEESLVL 449
++ G++P + KG E +
Sbjct: 206 ALSYGQKPYKK--MKGPEVMAF 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 225 DKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDMLSR 278
+ F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLLKE 57
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L+H ++V L+ LVFE + + +L+ +D + G+ +
Sbjct: 58 LNHPNIVKLLDVIH----TENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + + +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYTHEVV-- 164
Query: 399 TFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEESL 447
T Y APE + S D++S G + E++T R Q T G
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 225 VVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 268
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 44/285 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
F+ +G+G V++G D R +VA+K + + E+ +LS+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 284 VVPLVG-YCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVLVEGMNWDTRVA-IAIGAARG 340
V G Y K ++ E++ G+ D L+ G L E T++A I +G
Sbjct: 67 VTKYYGSYL-----KDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKG 116
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L+YLH + + +HRDIK++N+LL E+ K+ D G+A +L + GT
Sbjct: 117 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-----FVGTP 168
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460
+ APE +D++S G+ +EL G +P H + + VL+ P+
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHPMK---VLFLIPKNN---- 220
Query: 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P L+G++ K + + CL +P RPT E+++
Sbjct: 221 ------PPTLEGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 67 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 116
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 117 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 170
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 70 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 119
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 120 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 173
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 228
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V G+ VA+K K G ++ F+ E ++ L H +V L G C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-WDTRVAIAI--GAARGLEYLHEAAA 349
K+ ++ E+M NG CL L E + + T+ + + +EYL +
Sbjct: 74 ----KQRPIFIITEYMANG----CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---S 122
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS--PARMQGTFGYFAPEY 407
+ LHRD+ + N L+++ K++D G+++ + D S S P R + PE
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------WSPPEV 176
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438
M + S SD+++FGV++ E+ + G+ P R
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 208
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 89 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 138
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + + ++S
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS---FV 192
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 247
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 59/284 (20%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V+ VAVK K G + FL E +++ L H +V L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP--GSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
+ ++ EFM G+L D L + + A G+ ++ +
Sbjct: 248 -----KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 299
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD++++NIL+ +L KI D G+A+ + P + + APE G
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLAR--------VGAKFPIK------WTAPEAINFGS 345
Query: 413 ASLMSDVFSFGVVLLELIT-GRQP--------IHRSITKGEESLVLWATPRLQDSGTVIS 463
++ SDV+SFG++L+E++T GR P + R++ +G
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-------------------Y 386
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
+P P + P+E IM C + P+ RPT + +L
Sbjct: 387 RMPRPE---NCPEELYNIMM----RCWKNRPEERPTFEYIQSVL 423
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 69 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 118
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 119 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 172
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
GR VAVK + + +F EV ++ H +VV + Y S G+ L+ EF+
Sbjct: 70 GRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEM--YKSYLVGEELWVLM--EFL 124
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
G L D + V +N + + + L YLH A ++HRDIKS +ILL +
Sbjct: 125 QGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDG 178
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPAR--MQGTFGYFAPEYAMVGRASLMSDVFSFGVVL 426
K++D G ++ D P R + GT + APE + D++S G+++
Sbjct: 179 RVKLSDFGFCAQISKD-------VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMV 231
Query: 427 LELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLA 486
+E++ G P + A RL+DS P P+LK ++
Sbjct: 232 IEMVDGEPPYFSDSP-------VQAMKRLRDS-------PPPKLKNSHKVSP--VLRDFL 275
Query: 487 KECLQLDPDARPTMSEVV 504
+ L DP R T E++
Sbjct: 276 ERMLVRDPQERATAQELL 293
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 68 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 117
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 118 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 171
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 226
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V G+ VA+K K G ++ F+ E ++ L H +V L G C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-WDTRVAIAI--GAARGLEYLHEAAA 349
K+ ++ E+M NG CL L E + + T+ + + +EYL +
Sbjct: 70 ----KQRPIFIITEYMANG----CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---S 118
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS--PARMQGTFGYFAPEY 407
+ LHRD+ + N L+++ K++D G+++ + D S S P R + PE
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------WSPPEV 172
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438
M + S SD+++FGV++ E+ + G+ P R
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 204
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 93 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 142
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + + ++S
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS---FV 196
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 251
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
G+ VAVK+ + + +F EV ++ HH +VV + Y S G +V EF+
Sbjct: 70 GKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDM--YSSYLVGDELW--VVMEFL 124
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368
G L D V MN + + + R L YLH ++HRDIKS +ILL +
Sbjct: 125 EGGALTDI---VTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDG 178
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPAR--MQGTFGYFAPEYAMVGRASLMSDVFSFGVVL 426
K++D G ++ + P R + GT + APE D++S G+++
Sbjct: 179 RIKLSDFGFCAQVSKE-------VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV 231
Query: 427 LELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLA 486
+E+I G P + P LQ + LP PR+K D K + +L
Sbjct: 232 IEMIDGEPP-------------YFNEPPLQAMRRIRDSLP-PRVK-DLHKVSSVLRGFLD 276
Query: 487 KECLQLDPDARPTMSEVV 504
++ +P R T E++
Sbjct: 277 LMLVR-EPSQRATAQELL 293
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V G+ VA+K K G ++ F+ E ++ L H +V L G C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-WDTRVAIAI--GAARGLEYLHEAAA 349
K+ ++ E+M NG CL L E + + T+ + + +EYL +
Sbjct: 75 ----KQRPIFIITEYMANG----CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---S 123
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS--PARMQGTFGYFAPEY 407
+ LHRD+ + N L+++ K++D G+++ + D S S P R + PE
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR------WSPPEV 177
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438
M + S SD+++FGV++ E+ + G+ P R
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 74 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 123
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 124 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 177
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 232
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V G+ VA+K K G ++ F+ E ++ L H +V L G C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-WDTRVAIAI--GAARGLEYLHEAAA 349
K+ ++ E+M NG CL L E + + T+ + + +EYL +
Sbjct: 90 ----KQRPIFIITEYMANG----CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---S 138
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS--PARMQGTFGYFAPEY 407
+ LHRD+ + N L+++ K++D G+++ + D S S P R + PE
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------WSPPEV 192
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438
M + S SD+++FGV++ E+ + G+ P R
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V G+ VA+K K G ++ F+ E ++ L H +V L G C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-WDTRVAIAI--GAARGLEYLHEAAA 349
K+ ++ E+M NG CL L E + + T+ + + +EYL +
Sbjct: 81 ----KQRPIFIITEYMANG----CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---S 129
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS--PARMQGTFGYFAPEY 407
+ LHRD+ + N L+++ K++D G+++ + D S S P R + PE
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------WSPPEV 183
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438
M + S SD+++FGV++ E+ + G+ P R
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V G+ VA+K K G ++ F+ E ++ L H +V L G C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-WDTRVAIAI--GAARGLEYLHEAAA 349
K+ ++ E+M NG CL L E + + T+ + + +EYL +
Sbjct: 75 ----KQRPIFIITEYMANG----CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---S 123
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS--PARMQGTFGYFAPEY 407
+ LHRD+ + N L+++ K++D G+++ + D S S P R + PE
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------WSPPEV 177
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438
M + S SD+++FGV++ E+ + G+ P R
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 48/300 (16%)
Query: 223 ATDKFSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFK----TQGGPNADSVFLTEVDML 276
+ + F +G+G VY R +LT G +VA+K+ + T+G P S + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVP---STAIREISLL 59
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
L+H ++V L+ LVFE + + +L+ +D + G+ +
Sbjct: 60 KELNHPNIVKLLDVIH----TENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+GL + H R+LHRD+K N+L++ K+ D G+A +A G+P + +
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA---RAFGVPVRTYXHEVV 168
Query: 397 QGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGR----------QPIHRSITKGEE 445
T Y APE + S D++S G + E++T R Q T G
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
V+W ++ +PD K FPK Q +K LD D R +S+++
Sbjct: 227 DEVVWPG---------VTSMPD--YKPSFPKWARQD---FSKVVPPLDEDGRSLLSQMLH 272
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 42/280 (15%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 141
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 195
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y +PE A SD+++ G ++ +L+ G P G E L+
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFR----AGNEGLIF-------- 243
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+I +L+ DFP++ L ++ L LD R
Sbjct: 244 -AKII------KLEYDFPEKFFPKARDLVEKLLVLDATKR 276
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 89 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 138
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 192
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 247
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 90 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 139
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 193
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 248
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 90 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 139
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 193
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 248
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 141
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 195
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 250
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 42/280 (15%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 141
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 195
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y +PE A SD+++ G ++ +L+ G P G E L+
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEGLIF-------- 243
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497
+I +L+ DFP++ L ++ L LD R
Sbjct: 244 -AKII------KLEYDFPEKFFPKARDLVEKLLVLDATKR 276
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 141
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 195
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 250
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 33/242 (13%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 90 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 139
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L S S AR
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQARAN 190
Query: 398 ---GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR 454
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIK 246
Query: 455 LQ 456
L+
Sbjct: 247 LE 248
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 90 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 139
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 193
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 248
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 93 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 142
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 196
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 251
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 141
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 195
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 250
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 252 VAVKRFKTQGGPNADSV-FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VA+K K QG AD+ + E ++ +L + ++V L+G C + +LV E
Sbjct: 366 VAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-----QAEALMLVMEMAGG 419
Query: 311 GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNA 370
G L L G E + + + G++YL E +HR++ + N+LL A
Sbjct: 420 GPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYA 475
Query: 371 KITDLGMAKRLKADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLE 428
KI+D G++K L AD S AR G + ++APE + S SDV+S+GV + E
Sbjct: 476 KISDFGLSKALGADD----SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
Query: 429 LIT-GRQPIHRSITKGEESLVL 449
++ G++P + KG E +
Sbjct: 532 ALSYGQKPYKK--MKGPEVMAF 551
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 225 DKFSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLT-EVDMLSRLHH 281
+ F I+G+G S+ V +L R A+K + + + V ++T E D++SRL H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 282 CHVVPLVGYCSEFRGKRAMRLLV-FEFMPNGNLRDCLDGVLVEGMNWD---TRVAIAIGA 337
V L F + +L + NG L + + ++D TR A
Sbjct: 95 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA-EI 144
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
LEYLH I+HRD+K NILL+E+++ +ITD G AK L + S +
Sbjct: 145 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE---SKQARANXFV 198
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y +PE A SD+++ G ++ +L+ G P G E L+ +L+
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR----AGNEYLIFQKIIKLE 253
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWD-TRVAIAIGA 337
H +++ L GY + A R+ L+ E+ P G + L + +D R A I
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITE 121
Query: 338 -ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 171
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y PE D++S GV+ E + G+ P + Q
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQ 217
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
++ IS R++ FP + L L+ +P RP + EV++
Sbjct: 218 ETYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
+G G V G+ VA+K K G ++ F+ E ++ L H +V L G C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-WDTRVAIAI--GAARGLEYLHEAAA 349
K+ ++ E+M NG CL L E + + T+ + + +EYL +
Sbjct: 90 ----KQRPIFIITEYMANG----CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---S 138
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSS--PARMQGTFGYFAPEY 407
+ LHRD+ + N L+++ K++D G+++ + D S S P R + PE
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR------WSPPEV 192
Query: 408 AMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438
M + S SD+++FGV++ E+ + G+ P R
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 41/297 (13%)
Query: 219 ALEHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLS 277
++E D +G+G V + + G+I+AVKR + L ++D+
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 278 RLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW--DTRVAIAI 335
R C + Y + FR + E M + +L V+ +G D IA+
Sbjct: 61 RTVDCPFT-VTFYGALFREGDVW--ICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV 116
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSS---- 391
+ LE+LH + ++HRD+K SN+L++ K+ D G++ L D +
Sbjct: 117 SIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP 174
Query: 392 --SPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL 449
+P R+ PE G S+ SD++S G+ ++EL R P
Sbjct: 175 YMAPERIN-------PELNQKGY-SVKSDIWSLGITMIELAILRFPYDS----------- 215
Query: 450 WATPRLQDSGTVISELPDPRLKGD-FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
W TP Q V+ E P P+L D F E +CL+ + RPT E++Q
Sbjct: 216 WGTP-FQQLKQVVEE-PSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 42/284 (14%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTDGR-IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
F+ + +G+G VY+G + +VA+K + + E+ +LS+ C
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ---CDSP 77
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA-RGLEYL 344
+ Y + K ++ E++ G+ D L +E +T +A + +GL+YL
Sbjct: 78 YITRYFGSYL-KSTKLWIIMEYLGGGSALDLLKPGPLE----ETYIATILREILKGLDYL 132
Query: 345 HEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
H + R +HRDIK++N+LL E + K+ D G+A +L + GT + A
Sbjct: 133 H---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX-----FVGTPFWMA 184
Query: 405 PEYAMVGRASLMSDVFSFGVVLLELITGRQP---IHRSITKGEESLVLWATPRLQDSGTV 461
PE +D++S G+ +EL G P +H VL+ P+
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH-------PMRVLFLIPKNS----- 232
Query: 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P L+G K + + + CL DP RPT E+++
Sbjct: 233 -----PPTLEGQHSKPFKEFV----EACLNKDPRFRPTAKELLK 267
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 129/320 (40%), Gaps = 77/320 (24%)
Query: 217 YSALEHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVK-------RFKTQGGPNADSV 268
++A + K+ +++G+G SS V R G AVK R +
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 269 FLTEVDMLSRLH-HCHVVPLV-GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN 326
E +L ++ H H++ L+ Y S + LVF+ M G L D L +
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESS-----SFMFLVFDLMRKGELFDYLTEKVALSEK 200
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386
+TR +I + +LH A I+HRD+K NILLD+N+ +++D G
Sbjct: 201 -ETR-SIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGF--------- 246
Query: 387 PSCSSSPA----RMQGTFGYFAPE---------YAMVGRASLMSDVFSFGVVLLELITGR 433
SC P + GT GY APE + G+ D+++ GV+L L+ G
Sbjct: 247 -SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKE---VDLWACGVILFTLLAGS 302
Query: 434 QPI-HRS-------ITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYL 485
P HR I +G+ +++P D + + + L
Sbjct: 303 PPFWHRRQILMLRMIMEGQYQ---FSSPEWDDRSSTVKD--------------------L 339
Query: 486 AKECLQLDPDARPTMSEVVQ 505
LQ+DP+AR T + +Q
Sbjct: 340 ISRLLQVDPEARLTAEQALQ 359
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 29/277 (10%)
Query: 233 VGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G V + + G+I+AVKR + L ++D+ R C + Y
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT-VTFYG 117
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW--DTRVAIAIGAARGLEYLHEAAA 349
+ FR + E M + +L V+ +G D IA+ + LE+LH +
Sbjct: 118 ALFREGDV--WICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 174
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
++HRD+K SN+L++ K+ D G++ L D + + + PE
Sbjct: 175 --VIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
G S+ SD++S G+ ++EL R P W TP Q V+ E P P+
Sbjct: 232 KG-YSVKSDIWSLGITMIELAILRFPYDS-----------WGTP-FQQLKQVVEE-PSPQ 277
Query: 470 LKGD-FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
L D F E +CL+ + RPT E++Q
Sbjct: 278 LPADKFSAE----FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 119/288 (41%), Gaps = 61/288 (21%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + V + + GR VA+K KTQ P + EV ++ L+H ++V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-- 77
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
E L+ E+ G + D L V M + ++Y H+
Sbjct: 78 --EVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSAVQYCHQK--- 130
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPS--CSS----SPARMQGTFGYFA 404
RI+HRD+K+ N+LLD ++N KI D G + G C S +P QG Y
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGK-KYDG 189
Query: 405 PEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
PE DV+S GV+L L++G P G + E
Sbjct: 190 PE----------VDVWSLGVILYTLVSGSLPF---------------------DGQNLKE 218
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKEC-------LQLDPDARPTMSEVVQ 505
L + L+G + +I Y++ +C L L+P R T+ ++++
Sbjct: 219 LRERVLRGKY-----RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVF-------LTEVD 274
AT ++ +G G VY+ + G VA+K + PN + EV
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV---PNGGGGGGGLPISTVREVA 63
Query: 275 MLSRLH---HCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTR 330
+L RL H +VV L+ C+ R R +++ LVFE + + +LR LD G+ +T
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
+ RGL++LH I+HRD+K NIL+ K+ D G+A+ + S
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQ 173
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + T Y APE + + D++S G + E+ R+P+
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 61/288 (21%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + V + + GR VA+K KTQ P + EV ++ L+H ++V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-- 80
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
E L+ E+ G + D L V M + ++Y H+
Sbjct: 81 --EVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSAVQYCHQK--- 133
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC------SSSPARMQGTFGYFA 404
RI+HRD+K+ N+LLD ++N KI D G + G ++P QG Y
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGK-KYDG 192
Query: 405 PEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
PE DV+S GV+L L++G P G + E
Sbjct: 193 PE----------VDVWSLGVILYTLVSGSLPF---------------------DGQNLKE 221
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKEC-------LQLDPDARPTMSEVVQ 505
L + L+G + +I Y++ +C L L+P R T+ ++++
Sbjct: 222 LRERVLRGKY-----RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPRGEVYKELQKL---SKFDEQRTATYITEL 122
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 172
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 218
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 219 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 104
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 220
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 221 Y-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPI 256
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 78
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 139 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 194
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 195 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 230
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 98
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 159 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSR 214
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 215 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 250
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 89
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 150 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 205
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 206 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 241
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 82
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 198
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 199 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 233 VGQGGSSYVYRGQ--LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + VY+G+ LTD +VA+K + + A + EV +L L H ++V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL--- 65
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
+ LVFE++ + +L+ LD G ++ N RGL Y H
Sbjct: 66 -HDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNII---NMHNVKLFLFQLLRGLAYCHRQ- 119
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
++LHRD+K N+L++E K+ D G+A +A +P+ + + T Y P+
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLA---RAKSIPTKTYDNEVV--TLWYRPPD-I 171
Query: 409 MVGRA--SLMSDVFSFGVVLLELITGR 433
++G S D++ G + E+ TGR
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 70
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 186
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 187 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 70
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 186
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 187 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 227 FSGSNIVGQGGSSYVY--RGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV 284
F ++G G S V+ + +LT G++ A+K K + DS E+ +L ++ H ++
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIK-KSPAFRDSSLENEIAVLKKIKHENI 68
Query: 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA-RGLEY 343
V L + LV + + G L D +L G+ + ++ I ++Y
Sbjct: 69 VTL----EDIYESTTHYYLVMQLVSGGEL---FDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 344 LHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
LHE I+HRD+K N+L +EN ITD G++K ++ +G+ S + GT
Sbjct: 122 LHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTAC------GTP 171
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHR 438
GY APE S D +S GV+ L+ G P +
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 104
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSR 220
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 221 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 256
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTDG----RIVAVKRFKTQGGPNADSVFLT-EVDMLSRLH 280
+F ++GQG V+ + G ++ A+K K D V E D+L ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-AR 339
H +V L Y + GK L+ +F+ G+L L E M + V + A
Sbjct: 85 HPFIVKL-HYAFQTEGKL---YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELAL 137
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L++LH I++RD+K NILLDE + K+TD G++K D S GT
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYS----FCGT 189
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451
Y APE + +D +SFGV++ E++TG P K +++L A
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 82
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 198
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 199 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 71
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 132 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 187
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 188 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 223
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 106
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 167 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSR 222
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 223 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 258
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 70
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSR 186
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 187 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 69 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 123
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 124 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 178 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 234 MKGSEVTAMLEKGERM 249
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 69 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 123
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 124 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 178 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 234 MKGSEVTAMLEKGERM 249
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 233 VGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G + V + + G++VAVK+ + + +F EV ++ H +VV + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 84
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
S G +V EF+ G L D V MN + A+ + + L LH A
Sbjct: 85 SYLVGDELW--VVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLH---AQG 136
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR--MQGTFGYFAPEYAM 409
++HRDIKS +ILL + K++D G ++ + P R + GT + APE
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELIS 189
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
D++S G++++E++ G P + P L+ + LP PR
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPLKAMKMIRDNLP-PR 235
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
LK + K + +L + L DP R T +E+++
Sbjct: 236 LK-NLHKVSPSLKGFLDR-LLVRDPAQRATAAELLK 269
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 67 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 121
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 122 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 176 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 231
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 232 MKGSEVTAMLEKGERM 247
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 83
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 144 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSR 199
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 200 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 411 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 465
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 466 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 520 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 576 MKGSEVTAMLEKGERM 591
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 412 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 466
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 467 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 521 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 576
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 577 MKGSEVTAMLEKGERM 592
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWD-TRVAIAIGA 337
H +++ L GY + A R+ L+ E+ P G + L + +D R A I
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITE 119
Query: 338 -ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
A L Y H + R++HRDIK N+LL KI D G + + + SS A +
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAAL 169
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y PE D++S GV+ E + G+ P + Q
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQ 215
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
++ IS R++ FP + L L+ +P RP + EV++
Sbjct: 216 ETYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 75
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 136 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSR 191
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 192 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 227
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 108
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 169 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSR 224
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 225 Y-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPI 260
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 53 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 107
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 108 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 162 RADE----NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 218 MKGSEVTAMLEKGERM 233
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 47 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 101
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 102 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 156 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 211
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 212 MKGSEVTAMLEKGERM 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
++ + ++G G VY+ +L D G +VA+K+ QG + E+ ++ +L HC++V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 286 PL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA-RGLE 342
L Y S + LV +++P R + V + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFG 401
Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSRY----- 187
Query: 402 YFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 53 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 107
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 108 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 162 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 218 MKGSEVTAMLEKGERM 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWD-TRVAIAIGA 337
H +++ L GY + A R+ L+ E+ P G + L + +D R A I
Sbjct: 67 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITE 117
Query: 338 -ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR- 395
A L Y H + R++HRDIK N+LL KI D G SC + +R
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SCHAPSSRR 164
Query: 396 --MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
+ GT Y PE D++S GV+ E + G+ P +
Sbjct: 165 TTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------------- 211
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
Q++ IS R++ FP + L L+ +P RP + EV++
Sbjct: 212 -YQETYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 74
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 135 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 190
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 191 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 233 VGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G + V + + G++VAVK+ + + +F EV ++ H +VV + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 93
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
S G +V EF+ G L D V MN + A+ + + L LH A
Sbjct: 94 SYLVGDELW--VVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLH---AQG 145
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR--MQGTFGYFAPEYAM 409
++HRDIKS +ILL + K++D G ++ + P R + GT + APE
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELIS 198
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
D++S G++++E++ G P + P L+ + LP PR
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPLKAMKMIRDNLP-PR 244
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
LK + K + +L + L DP R T +E+++
Sbjct: 245 LK-NLHKVSPSLKGFLDR-LLVRDPAQRATAAELLK 278
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 59 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 113
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 114 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 168 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 224 MKGSEVTAMLEKGERM 239
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 31/213 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCHVVPLVGY 290
VG G V + +LT G VAVK Q + D V E+ L H H++ L
Sbjct: 26 VGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRD--CLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
S + +V E++ G L D C +G L E + R+ I + G++Y H
Sbjct: 85 IS----TPSDIFMVMEYVSGGELFDYICKNGRLDEKES--RRLFQQILS--GVDYCHRHM 136
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG---LPSCSSSPARMQGTFGYFAP 405
++HRD+K N+LLD ++NAKI D G++ + +DG SC G+ Y AP
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSN-MMSDGEFLRXSC--------GSPNYAAP 184
Query: 406 EYAMVGR--ASLMSDVFSFGVVLLELITGRQPI 436
E + GR A D++S GV+L L+ G P
Sbjct: 185 E-VISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 233 VGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G + V + + G++VAVK+ + + +F EV ++ H +VV + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 88
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
S G +V EF+ G L D V MN + A+ + + L LH A
Sbjct: 89 SYLVGDELW--VVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLH---AQG 140
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR--MQGTFGYFAPEYAM 409
++HRDIKS +ILL + K++D G ++ + P R + GT + APE
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELIS 193
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
D++S G++++E++ G P + P L+ + LP PR
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPLKAMKMIRDNLP-PR 239
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
LK + K + +L + L DP R T +E+++
Sbjct: 240 LK-NLHKVSPSLKGFLDR-LLVRDPAQRATAAELLK 273
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
++ + ++G G VY+ +L D G +VA+K+ QG + E+ ++ +L HC++V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 286 PL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA-RGLE 342
L Y S + LV +++P R + V + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFG 401
Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSRY----- 187
Query: 402 YFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 233 VGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G + V + + G++VAVK+ + + +F EV ++ H +VV + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 95
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
S G +V EF+ G L D V MN + A+ + + L LH A
Sbjct: 96 SYLVGDELW--VVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLH---AQG 147
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR--MQGTFGYFAPEYAM 409
++HRDIKS +ILL + K++D G ++ + P R + GT + APE
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELIS 200
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
D++S G++++E++ G P + P L+ + LP PR
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPLKAMKMIRDNLP-PR 246
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
LK + K + +L + L DP R T +E+++
Sbjct: 247 LK-NLHKVSPSLKGFLDR-LLVRDPAQRATAAELLK 280
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD-GVL 321
P L E +++ +L + ++V ++G C + +LV E G L L
Sbjct: 49 PALKDELLAEANVMQQLDNPYIVRMIGIC-----EAESWMLVMEMAELGPLNKYLQQNRH 103
Query: 322 VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381
V+ N + + + G++YL E+ +HRD+ + N+LL AKI+D G++K L
Sbjct: 104 VKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
Query: 382 KADGLPSCSSSPARMQGTF--GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439
+AD + A+ G + ++APE + S SDV+SFGV++ E + Q +R
Sbjct: 158 RADE----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 213
Query: 440 ITKGEESLVLWATPRL 455
+ E + +L R+
Sbjct: 214 MKGSEVTAMLEKGERM 229
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH + I++RD+K NILLD+N + KITD G AK + C GT
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC--------GT 166
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
Y APE + D +SFG+++ E++ G P + S T +L A R
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 222
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 149
Query: 280 HHCHVVPL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L Y S + LV +++P R + V + +
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 210 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSR 265
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 266 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 301
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 122
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 172
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 218
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 219 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 83 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 134
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 135 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 184
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 230
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 231 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAV------KRFKTQGGPNADSVFLTEVDMLSRL 279
++ + ++G G VY+ +L D G +VA+ KRFK + E+ ++ +L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----------ELQIMRKL 70
Query: 280 HHCHVVPL-VGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
HC++V L + S K + L LV +++P R + V + +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 338 A-RGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPAR 395
R L Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSR 186
Query: 396 MQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 187 Y-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 41/282 (14%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ + ++E+ ++S L H ++V L+G C+ L++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH----GGPVLVITEYCCY 134
Query: 311 GNLRDCL--DGVLVEGMNWDTRVAIAIGAARGLEYLHEA----------AAPRILHRDIK 358
G+L + L ++E D AIA A + LH + A+ +HRD+
Sbjct: 135 GDLLNFLRRKSRVLET---DPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVA 191
Query: 359 SSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSD 418
+ N+LL AKI D G+A+ + D AR+ + APE ++ SD
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARL--PVKWMAPESIFDCVYTVQSD 248
Query: 419 VFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKE 477
V+S+G++L E+ + G P + + +L G ++ P PK
Sbjct: 249 VWSYGILLWEIFSLGLNPYPGILVNSKFY-------KLVKDGY---QMAQPAFA---PKN 295
Query: 478 EMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRN 519
IM + C L+P RPT ++ L A + R R+
Sbjct: 296 IYSIM----QACWALEPTHRPTFQQICSFLQEQAQEDRRERD 333
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMXGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
++ + ++G G VY+ +L D G +VA+K+ QG + E+ ++ +L HC++V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 286 PL--VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA-RGLE 342
L Y S + LV +++P R + V + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFG 401
Y+H I HRDIK N+LLD + K+ D G AK+L G P+ S +R
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY----- 187
Query: 402 YFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
Y APE + G S DV+S G VL EL+ G QPI
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTDG----RIVAVKRFKTQGGPNADSVFL-TEVDMLSRLH 280
+F ++GQG V+ + G ++ A+K K D V E D+L ++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-AR 339
H +V L Y + GK L+ +F+ G+L L E M + V + A
Sbjct: 86 HPFIVKL-HYAFQTEGKL---YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELAL 138
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L++LH I++RD+K NILLDE + K+TD G++K D S GT
Sbjct: 139 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYS----FCGT 190
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451
Y APE + +D +SFGV++ E++TG P K +++L A
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTDG----RIVAVKRFKTQGGPNADSVFL-TEVDMLSRLH 280
+F ++GQG V+ + G ++ A+K K D V E D+L ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-AR 339
H +V L Y + GK L+ +F+ G+L L E M + V + A
Sbjct: 85 HPFIVKL-HYAFQTEGKL---YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELAL 137
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L++LH I++RD+K NILLDE + K+TD G++K D S GT
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYS----FCGT 189
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451
Y APE + +D +SFGV++ E++TG P K +++L A
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 72 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMXGTLPYVAPE-- 177
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 119/288 (41%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 117
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS A +
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALC 167
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 213
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 214 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 68 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 119
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 120 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLC 169
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 215
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 216 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 120/288 (41%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + + I+A+K FK Q + EV++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + + R+ L+ E+ P G + L + + R A I
Sbjct: 66 RHPNILRLYGYFHD-----STRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 117
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + +++HRDIK N+LL KI D G + + + SS A +
Sbjct: 118 ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALC 167
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + QD
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQD 213
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 214 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 117
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTELC 167
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 213
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 214 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 92 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 143
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 144 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 193
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 239
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 240 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 225 DKFSGSNIVGQGGSSYVYR------GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR 278
D + ++G+G S V R GQ +IV V +F + G + + + E +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL-KREASICHM 82
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L H H+V L+ E M +VFEFM +L C + V + A+A
Sbjct: 83 LKHPHIVELL----ETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYM 136
Query: 339 RG-LEYLHEAAAPRILHRDIKSSNILLDENLNA---KITDLGMAKRLKADGLPSCSSSPA 394
R LE L I+HRD+K N+LL N+ K+ D G+A +L GL +
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-- 194
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
GT + APE DV+ GV+L L++G P +
Sbjct: 195 ---GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 37/276 (13%)
Query: 233 VGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G + V + + G++VAVK+ + + +F EV ++ H +VV + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 215
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
S G +V EF+ G L D V MN + A+ + + L LH
Sbjct: 216 SYLVGDELW--VVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLHAQG--- 267
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR--MQGTFGYFAPEYAM 409
++HRDIKS +ILL + K++D G ++ + P R + GT + APE
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELIS 320
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
D++S G++++E++ G P + P L+ + LP PR
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPLKAMKMIRDNLP-PR 366
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
LK + K + +L + L DP R T +E+++
Sbjct: 367 LK-NLHKVSPSLKGFLDR-LLVRDPAQRATAAELLK 400
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 120
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 170
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 216
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 217 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 67 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 118
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLC 168
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 214
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 215 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 122
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 172
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 218
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 219 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 41/302 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
VG+G V+RG G VAVK F ++ + S F TE+ L H +++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH-----E 346
R L+ + G+L D L ++ + + + I + A GL +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHIEIFGT 157
Query: 347 AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPE 406
P I HRD+KS NIL+ +N I DLG+A + + GT Y APE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 407 -------------YAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL---VLW 450
Y V D+++FG+VL E+ R+ + I + + V+
Sbjct: 217 VLDETIQVDCFDSYKRV-------DIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVP 267
Query: 451 ATPRLQDSGTVI-SELPDPRLKGD-FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
P +D V+ + P + F + +A L KEC +P AR T + + L+
Sbjct: 268 NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 327
Query: 509 TI 510
I
Sbjct: 328 KI 329
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 37/278 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ + ++E+ ++S L H ++V L+G C+ L++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH----GGPVLVITEYCCY 134
Query: 311 GNLRDCL------DGVLVEGMNWDTRVAIAIGA--ARGLEYLHEAAAPRILHRDIKSSNI 362
G+L + L D +G + R + + A+G+ +L A+ +HRD+ + N+
Sbjct: 135 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 191
Query: 363 LLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSF 422
LL AKI D G+A+ + D AR+ + APE ++ SDV+S+
Sbjct: 192 LLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSY 248
Query: 423 GVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQI 481
G++L E+ + G P + + +L G ++ P PK I
Sbjct: 249 GILLWEIFSLGLNPYPGILVNSK-------FYKLVKDGY---QMAQPAFA---PKNIYSI 295
Query: 482 MAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRN 519
M + C L+P RPT ++ L A + R R+
Sbjct: 296 M----QACWALEPTHRPTFQQICSFLQEQAQEDRRERD 329
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 41/302 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
VG+G V+RG G VAVK F ++ + S F TE+ L H +++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH-----E 346
R L+ + G+L D L ++ + + + I + A GL +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHIEIFGT 128
Query: 347 AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPE 406
P I HRD+KS NIL+ +N I DLG+A + + GT Y APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 407 -------------YAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL---VLW 450
Y V D+++FG+VL E+ R+ + I + + V+
Sbjct: 188 VLDETIQVDCFDSYKRV-------DIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVP 238
Query: 451 ATPRLQDSGTVI-SELPDPRLKGD-FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
P +D V+ + P + F + +A L KEC +P AR T + + L+
Sbjct: 239 NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
Query: 509 TI 510
I
Sbjct: 299 KI 300
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 41/302 (13%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFL-TEVDMLSRLHHCHVVPLVGYC 291
VG+G V+RG G VAVK F ++ + S F TE+ L H +++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH-----E 346
R L+ + G+L D L ++ + + + I + A GL +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHIEIFGT 128
Query: 347 AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPE 406
P I HRD+KS NIL+ +N I DLG+A + + GT Y APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 407 -------------YAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL---VLW 450
Y V D+++FG+VL E+ R+ + I + + V+
Sbjct: 188 VLDETIQVDCFDSYKRV-------DIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVP 238
Query: 451 ATPRLQDSGTVI-SELPDPRLKGD-FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508
P +D V+ + P + F + +A L KEC +P AR T + + L+
Sbjct: 239 NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
Query: 509 TI 510
I
Sbjct: 299 KI 300
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 232 IVGQGGSSYVYRGQ----LTDGRIVAVKRFK-TQGGPNADSVFLT--EVDMLSRLHHCHV 284
++G+GG V++ + G+I A+K K NA T E ++L + H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLE 342
V L+ Y + GK L+ E++ G L L+ G+ +E DT + L
Sbjct: 84 VDLI-YAFQTGGKL---YLILEYLSGGELFMQLEREGIFME----DTACFYLAEISMALG 135
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGY 402
+LH+ I++RD+K NI+L+ + K+TD G+ K DG + + GT Y
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC-----GTIEY 187
Query: 403 FAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
APE M + D +S G ++ +++TG P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 117
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 167
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 213
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 214 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 122
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLC 172
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 218
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 219 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 80
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 81 TE-----NPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + + APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED----STXXKASKGKLPIKWMAPESINFR 187
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 234
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 235 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 41/283 (14%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G V + + + G+I AVKR + L ++D+ R C + Y
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFT-VTFYG 100
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW--DTRVAIAIGAARGLEYLHEAAA 349
+ FR + + + + +L V+ +G D IA+ + LE+LH +
Sbjct: 101 ALFR---EGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 157
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSS------SPARMQGTFGYF 403
++HRD+K SN+L++ K D G++ L D + +P R+
Sbjct: 158 --VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERIN------ 209
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
PE G S+ SD++S G+ +EL R P W TP Q V+
Sbjct: 210 -PELNQKGY-SVKSDIWSLGITXIELAILRFPYDS-----------WGTP-FQQLKQVVE 255
Query: 464 ELPDPRLKGD-FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
E P P+L D F E + + +CL+ + RPT E+ Q
Sbjct: 256 E-PSPQLPADKFSAEFVDFTS----QCLKKNSKERPTYPELXQ 293
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 117
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLC 167
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 213
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 214 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 80
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 81 TE-----NPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 187
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 234
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 235 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 43/284 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ + ++E+ ++S L H ++V L+G C+ L++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH----GGPVLVITEYCCY 134
Query: 311 GNLRDCLDGVLVEGMNWDTR--------------VAIAIGAARGLEYLHEAAAPRILHRD 356
G+L + L G+ + + + A+G+ +L A+ +HRD
Sbjct: 135 GDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRD 191
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+ + N+LL AKI D G+A+ + D + AR+ + APE ++
Sbjct: 192 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN-ARL--PVKWMAPESIFDCVYTVQ 248
Query: 417 SDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFP 475
SDV+S+G++L E+ + G P + + +L G ++ P P
Sbjct: 249 SDVWSYGILLWEIFSLGLNPYPGILVNSKFY-------KLVKDGY---QMAQPAFA---P 295
Query: 476 KEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRN 519
K IM + C L+P RPT ++ L A + R R+
Sbjct: 296 KNIYSIM----QACWALEPTHRPTFQQICSFLQEQAQEDRRERD 335
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 41/282 (14%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ + ++E+ ++S L H ++V L+G C+ L++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH----GGPVLVITEYCCY 134
Query: 311 GNLRDCL----------DGVLVEGMNWDTRVAIAIGA--ARGLEYLHEAAAPRILHRDIK 358
G+L + L + TR + + A+G+ +L A+ +HRD+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 191
Query: 359 SSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSD 418
+ N+LL AKI D G+A+ + D AR+ + APE ++ SD
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARL--PVKWMAPESIFDCVYTVQSD 248
Query: 419 VFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKE 477
V+S+G++L E+ + G P + + +L G ++ P PK
Sbjct: 249 VWSYGILLWEIFSLGLNPYPGILVNSKFY-------KLVKDGY---QMAQPAFA---PKN 295
Query: 478 EMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRN 519
IM + C L+P RPT ++ L A + R R+
Sbjct: 296 IYSIM----QACWALEPTHRPTFQQICSFLQEQAQEDRRERD 333
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMXGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 67 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 118
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLC 168
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 214
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 215 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 232 IVGQGGSSYVYRGQ----LTDGRIVAVKRFKTQG-GPNADSVFLT--EVDMLSRLHHCHV 284
++G+GG V++ + G+I A+K K NA T E ++L + H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLE 342
V L+ Y + GK L+ E++ G L L+ G+ +E DT + L
Sbjct: 84 VDLI-YAFQTGGKL---YLILEYLSGGELFMQLEREGIFME----DTACFYLAEISMALG 135
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGY 402
+LH+ I++RD+K NI+L+ + K+TD G+ K DG + GT Y
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-----TVTHXFCGTIEY 187
Query: 403 FAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
APE M + D +S G ++ +++TG P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMXGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 233 VGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G+G + V + + G++VAVK+ + + +F EV ++ H +VV + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 138
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
S G +V EF+ G L D V MN + A+ + + L LH A
Sbjct: 139 SYLVGDELW--VVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLH---AQG 190
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR--MQGTFGYFAPEYAM 409
++HRDIKS +ILL + K++D G ++ + P R + GT + APE
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELIS 243
Query: 410 VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
D++S G++++E++ G P + P L+ + LP PR
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPLKAMKMIRDNLP-PR 289
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
LK + K + +L + L DP R T +E+++
Sbjct: 290 LK-NLHKVSPSLKGFLDR-LLVRDPAQRATAAELLK 323
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 117
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLC 167
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 213
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 214 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G + V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 120
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 170
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 216
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 217 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 92 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 143
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 144 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLC 193
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 239
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 240 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 65 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 116
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 117 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 166
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 212
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 213 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 21 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 80
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 81 TE-----NPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + APE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 187
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 234
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 235 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 120
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLC 170
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 216
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 217 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMXGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 49 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 108
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 109 TE-----NPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLE---SKR 159
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + APE
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 215
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 262
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 263 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWD-TRVAIAIGA 337
H +++ L GY + A R+ L+ E+ P G + L + +D R A I
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITE 116
Query: 338 -ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTXL 166
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y PE D++S GV+ E + G+ P + Q
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQ 212
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
++ IS R++ FP + L L+ +P RP + EV++
Sbjct: 213 ETYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 23 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 82
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 83 TE-----NPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLE---SKR 133
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + APE
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 189
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 236
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 237 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 271
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 18 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 77
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 78 TE-----NPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLE---SKR 128
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + APE
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 184
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 231
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 232 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 266
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 26 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 85
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 86 TE-----NPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLE---SKR 136
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + APE
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 192
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 239
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 240 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 24 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 83
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 84 TE-----NPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLE---SKR 134
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + APE
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 190
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 237
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 238 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 272
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWD-TRVAIAIGA 337
H +++ L GY + A R+ L+ E+ P G + L + +D R A I
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITE 116
Query: 338 -ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 166
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y PE D++S GV+ E + G+ P + Q
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQ 212
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
++ IS R++ FP + L L+ +P RP + EV++
Sbjct: 213 ETYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+ + + G + A K +T+ + ++ E+++L+ H ++V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED-YIVEIEILATCDHPYIVKLLG-A 84
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
GK ++ EF P G +D +++E T I + + LE L+ + R
Sbjct: 85 YYHDGKL---WIMIEFCPGG----AVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137
Query: 352 ILHRDIKSSNILLDENLNAKITDLGM-AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
I+HRD+K+ N+L+ + ++ D G+ AK LK L S GT + APE M
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQKRDS----FIGTPYWMAPEVVMC 191
Query: 411 GRA-----SLMSDVFSFGVVLLELITGRQPIH 437
+D++S G+ L+E+ P H
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 37/238 (15%)
Query: 233 VGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G GG + V + G +VA+K + TE++ L L H H+ L +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLY-HV 76
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
E K M V E+ P G L D + D + E +TRV + Y+H
Sbjct: 77 LETANKIFM---VLEYCPGGELFDYIISQDRLSEE----ETRVVFR-QIVSAVAYVHSQG 128
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD---GLPSCSSSPARMQGTFGYFAP 405
HRD+K N+L DE K+ D G+ + K + L +C G+ Y AP
Sbjct: 129 YA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-------GSLAYAAP 178
Query: 406 EYAMVGRASLMS--DVFSFGVVLLELITGRQP--------IHRSITKGEESLVLWATP 453
E + G++ L S DV+S G++L L+ G P +++ I +G+ + W +P
Sbjct: 179 E-LIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSP 235
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
+G G VY+ + + G + A K +T+ + ++ E+++L+ H ++V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED-YIVEIEILATCDHPYIVKLLG-A 76
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
GK ++ EF P G +D +++E T I + + LE L+ + R
Sbjct: 77 YYHDGKL---WIMIEFCPGG----AVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 129
Query: 352 ILHRDIKSSNILLDENLNAKITDLGM-AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
I+HRD+K+ N+L+ + ++ D G+ AK LK L S GT + APE M
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQKRDS----FIGTPYWMAPEVVMC 183
Query: 411 GRA-----SLMSDVFSFGVVLLELITGRQPIHR 438
+D++S G+ L+E+ P H
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + + L+H +VV
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 72 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 177
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
GL++LH I++RD+K NILLD++ + KI D GM K + L ++ GT
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE---NMLGDAKTN--EFCGT 182
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE + + + D +SFGV+L E++ G+ P H
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 72 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 177
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 68 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 119
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI + G + + + SS +
Sbjct: 120 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLC 169
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 215
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 216 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 13 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 70 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 124 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 175
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 44/294 (14%)
Query: 218 SALEHATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVD 274
S + A + F +G+G VY + + I+A+K FK Q + EV+
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 275 MLSRLHHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWD-TRVA 332
+ S L H +++ L GY + A R+ L+ E+ P G + L + +D R A
Sbjct: 65 IQSHLRHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTA 115
Query: 333 IAIGA-ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSS 391
I A L Y H + R++HRDIK N+LL KI D G + + + SS
Sbjct: 116 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSS 165
Query: 392 SPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451
+ GT Y PE D++S GV+ E + G+ P +
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------- 214
Query: 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
Q++ IS R++ FP + L L+ +P RP + EV++
Sbjct: 215 ---YQETYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 72 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 177
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 47/299 (15%)
Query: 221 EHATDKFSGSN---IVGQ-GGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDML 276
EH T + + I+G+ G VY+ Q + ++A + ++ E+D+L
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336
+ H ++V L+ F + + +L+ EF G +D V++E T I +
Sbjct: 62 ASCDHPNIVKLL---DAFYYENNLWILI-EFCAGG----AVDAVMLELERPLTESQIQVV 113
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+ L+ L+ +I+HRD+K+ NIL + + K+ D G++ + + S
Sbjct: 114 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS----F 169
Query: 397 QGTFGYFAPEYAMVGRA-----SLMSDVFSFGVVLLELITGRQPIH-----RSITKGEES 446
GT + APE M + +DV+S G+ L+E+ P H R + K +S
Sbjct: 170 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 229
Query: 447 LVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
P L S D K+CL+ + DAR T S+++Q
Sbjct: 230 ----EPPTLAQPSRWSSNFKD-----------------FLKKCLEKNVDARWTTSQLLQ 267
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 72 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 177
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
GL++LH I++RD+K NILLD++ + KI D GM K + L ++ GT
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE---NMLGDAKTN--XFCGT 181
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE + + + D +SFGV+L E++ G+ P H
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 71 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 176
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 29/223 (13%)
Query: 230 SNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
S+I+GQG ++ V+RG+ G + A+K F V + E ++L +L+H ++V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDG-VLVEGMNWDTRVAIAIGAARGLEYLHEA 347
E + ++L+ EF P G+L L+ G+ + + G+ +L E
Sbjct: 74 AIEEETTTRH--KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 348 AAPRILHRDIKSSNILL----DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
I+HR+IK NI+ D K+TD G A+ L+ D + GT Y
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD------EQFVSLYGTEEYL 182
Query: 404 APEYAMVGRASLMS----------DVFSFGVVLLELITGRQPI 436
P+ M RA L D++S GV TG P
Sbjct: 183 HPD--MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 72 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 177
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 72 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 177
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 233 VGQGGSSYVYRGQLTDGRI----VAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
+G+G V QL R+ VAVK + + E+ + L+H +VV
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
G+ R + ++ L E+ G L D ++ + GM G+ YLH
Sbjct: 72 GH----RREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYA 408
I HRDIK N+LLDE N KI+D G+A + + + +M GT Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN---KMCGTLPYVAPE-- 177
Query: 409 MVGRASLMS---DVFSFGVVLLELITGRQP 435
++ R + DV+S G+VL ++ G P
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 233 VGQGGSSYVY--RGQLTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVG 289
+G+G + V R LT GR VAVK KTQ P + EV ++ L+H ++V L
Sbjct: 23 IGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF- 80
Query: 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAA 349
E LV E+ G + D L V M A ++Y H+
Sbjct: 81 ---EVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQKY- 134
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRL----KAD---GLPSCSSSPARMQGTFGY 402
I+HRD+K+ N+LLD ++N KI D G + K D G P ++P QG Y
Sbjct: 135 --IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPY-AAPELFQGK-KY 190
Query: 403 FAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
PE DV+S GV+L L++G P
Sbjct: 191 DGPE----------VDVWSLGVILYTLVSGSLPF 214
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 63 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 114
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 115 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLC 164
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 210
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 211 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 401 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 460
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 461 TE-----NPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLE---SKR 511
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ N K+ D G+++ ++ S ++ + APE
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 567
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P + + + R+++ LP P
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPF-QGVKNND------VIGRIENG----ERLPMP-- 614
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
P + + + K C DP RP +E+ LSTI
Sbjct: 615 ----PNCPPTLYSLMTK-CWAYDPSRRPRFTELKAQLSTI 649
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 29/223 (13%)
Query: 230 SNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
S+I+GQG ++ V+RG+ G + A+K F V + E ++L +L+H ++V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVL-VEGMNWDTRVAIAIGAARGLEYLHEA 347
E + ++L+ EF P G+L L+ G+ + + G+ +L E
Sbjct: 74 AIEEETTTRH--KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 348 AAPRILHRDIKSSNILL----DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
I+HR+IK NI+ D K+TD G A+ L+ D + GT Y
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD------EQFVXLYGTEEYL 182
Query: 404 APEYAMVGRASLMS----------DVFSFGVVLLELITGRQPI 436
P+ M RA L D++S GV TG P
Sbjct: 183 HPD--MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 220 LEHAT----DKFSGSNIVGQG--GSSYVYRGQLTDGRIVAVKRF-KTQGGPNADS-VFLT 271
++H+T D++ G ++G+G G + + ++T G+ AVK K Q D L
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 81
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L +L H +++ L EF + LV E G L D ++ +
Sbjct: 82 EVQLLKQLDHPNIMKLY----EFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDA 134
Query: 332 AIAIGAA-RGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAKRLKADGLP 387
A I G+ Y+H+ +I+HRD+K N+LL+ ++ N +I D G++ +A
Sbjct: 135 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---- 187
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
S GT Y APE + G DV+S GV+L L++G P +
Sbjct: 188 --SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 234 GQGGSSYVYRGQLTDGRIVAVKRFKTQ-GGPNADSVFLTEVDMLSRLHHCHVVPLVGYCS 292
G+ G+ Y+ R + + + FKTQ + EV++ S L H +++ L GY
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 293 EFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-ARGLEYLHEAAAP 350
+ A R+ L+ E+ P G + L + + R A I A L Y H +
Sbjct: 83 D-----ATRVYLILEYAPLGTVYRELQKL---SRFDEQRTATYITELANALSYCH---SK 131
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
R++HRDIK N+LL N KI D G + + + SS + GT Y PE
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 411 GRASLMSDVFSFGVVLLELITGRQPI 436
D++S GV+ E + G P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 116/303 (38%), Gaps = 59/303 (19%)
Query: 233 VGQGGSSYVYRGQLT--DGRIV--AVKRFKTQ--GGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G V RG+ G+ V AVK K P A F+ EV+ + L H +++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G K +V E P G+L D L G + G T A+ A G+ Y
Sbjct: 80 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEGMGY 130
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + R +HRD+ + N+LL KI D G+ + L + ++ F +
Sbjct: 131 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 185
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT----------GRQPIHRSITKGEESLVLWATP 453
APE S SD + FGV L E+ T G Q +H+ +GE
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE--------- 236
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
LP P D P++ +M +C P+ RPT + L P
Sbjct: 237 ----------RLPRPE---DCPQDIYNVMV----QCWAHKPEDRPTFVALRDFLLEAQPT 279
Query: 514 KSR 516
R
Sbjct: 280 DMR 282
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 208 IHGTIIRFSYSALEHATDKFSGSNIVGQG--GSSYVYRGQLTDGRIVAVKRF-KTQGGPN 264
+H T F + +D++ G ++G+G G + + ++T G+ AVK K Q
Sbjct: 9 LHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQK 67
Query: 265 AD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE 323
D L EV +L +L H +++ L EF + LV E G L D ++
Sbjct: 68 TDKESLLREVQLLKQLDHPNIMKLY----EFFEDKGYFYLVGEVYTGGEL---FDEIISR 120
Query: 324 GMNWDTRVAIAIGAA-RGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAK 379
+ A I G+ Y+H+ +I+HRD+K N+LL+ ++ N +I D G++
Sbjct: 121 KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
Query: 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+A S GT Y APE + G DV+S GV+L L++G P +
Sbjct: 178 HFEA------SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWD-TRVAIAIGA 337
H +++ L GY + A R+ L+ E+ P G + L + +D R A I
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITE 119
Query: 338 -ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
A L Y H + R++HRDIK N+LL KI D G + + + SS +
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDL 169
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456
GT Y PE D++S GV+ E + G+ P + Q
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQ 215
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
++ IS R++ FP + L L+ +P RP + EV++
Sbjct: 216 ETYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRL 279
A + F +G+G VY + + I+A+K FK Q + EV++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 280 HHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA- 337
H +++ L GY + A R+ L+ E+ P G + L + + R A I
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITEL 120
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L Y H + R++HRDIK N+LL KI + G + + + SS +
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLC 170
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
GT Y PE D++S GV+ E + G+ P + Q+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------------YQE 216
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
+ IS R++ FP + L L+ +P RP + EV++
Sbjct: 217 TYKRIS-----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 41/260 (15%)
Query: 253 AVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
AVK N D S L EV++L +L H +++ L E + +V E G
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGG 106
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL---DENL 368
L D + + + + I G+ Y+H+ I+HRD+K NILL +++
Sbjct: 107 ELFDEI--IKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQ---GTFGYFAPEYAMVGRASLMSDVFSFGVV 425
+ KI D GL +C +M+ GT Y APE + G DV+S GV+
Sbjct: 162 DIKIIDF---------GLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVI 211
Query: 426 LLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYL 485
L L++G P + K E ++ + ++G +LP R D K+ L
Sbjct: 212 LYILLSGTPPFY---GKNEYDIL-----KRVETGKYAFDLPQWRTISDDAKD-------L 256
Query: 486 AKECLQLDPDARPTMSEVVQ 505
++ L P R T ++ ++
Sbjct: 257 IRKMLTFHPSLRITATQCLE 276
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 41/260 (15%)
Query: 253 AVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
AVK N D S L EV++L +L H +++ L E + +V E G
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGG 106
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL---DENL 368
L D + + + + I G+ Y+H+ I+HRD+K NILL +++
Sbjct: 107 ELFDEI--IKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQ---GTFGYFAPEYAMVGRASLMSDVFSFGVV 425
+ KI D GL +C +M+ GT Y APE + G DV+S GV+
Sbjct: 162 DIKIIDF---------GLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVI 211
Query: 426 LLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYL 485
L L++G P + K E ++ + ++G +LP R D K+ L
Sbjct: 212 LYILLSGTPPFY---GKNEYDIL-----KRVETGKYAFDLPQWRTISDDAKD-------L 256
Query: 486 AKECLQLDPDARPTMSEVVQ 505
++ L P R T ++ ++
Sbjct: 257 IRKMLTFHPSLRITATQCLE 276
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
+ + A+G+E+L A+ + +HRD+ + NILL E KI D G+A+ + D
Sbjct: 194 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVR 249
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
AR+ + APE ++ SDV+SFGV+L E+ + + + EE
Sbjct: 250 KGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--- 304
Query: 451 ATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYLAKECLQLDPDARPTMSEVVQILS 508
R GT R++ D+ EM Q M +C +P RPT SE+V+ L
Sbjct: 305 ---RRLKEGT--------RMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLG 349
Query: 509 TI 510
+
Sbjct: 350 NL 351
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 21/226 (9%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH 280
+ TD F +G+GG V+ + D A+KR + A + EV L++L
Sbjct: 3 YLTD-FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 281 HCHVVPLVGYCSEFRGKRAMR--------LLVFEFMPNGNLRDCLDG-VLVEGMNWDTRV 331
H +V E ++ + + NL+D ++G +E +
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSS 391
I + A +E+LH ++HRD+K SNI + K+ D G+ + D
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 392 SP----ARMQGTFG---YFAPEYAMVGRASLMSDVFSFGVVLLELI 430
+P AR G G Y +PE S D+FS G++L EL+
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
+ + A+G+E+L A+ + +HRD+ + NILL E KI D G+A+ + D
Sbjct: 196 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVR 251
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
AR+ + APE ++ SDV+SFGV+L E+ + + + EE
Sbjct: 252 KGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--- 306
Query: 451 ATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYLAKECLQLDPDARPTMSEVVQILS 508
R GT R++ D+ EM Q M +C +P RPT SE+V+ L
Sbjct: 307 ---RRLKEGT--------RMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLG 351
Query: 509 TI 510
+
Sbjct: 352 NL 353
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 116/303 (38%), Gaps = 59/303 (19%)
Query: 233 VGQGGSSYVYRGQL--TDGRIV--AVKRFKTQ--GGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G V RG+ G+ V AVK K P A F+ EV+ + L H +++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G K +V E P G+L D L G + G T A+ A G+ Y
Sbjct: 86 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEGMGY 136
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + R +HRD+ + N+LL KI D G+ + L + ++ F +
Sbjct: 137 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWC 191
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT----------GRQPIHRSITKGEESLVLWATP 453
APE S SD + FGV L E+ T G Q +H+ +GE
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE--------- 242
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
LP P D P++ +M +C P+ RPT + L P
Sbjct: 243 ----------RLPRPE---DCPQDIYNVMV----QCWAHKPEDRPTFVALRDFLLEAQPT 285
Query: 514 KSR 516
R
Sbjct: 286 DMR 288
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRLHH 281
+ F +G+G VY + + I+A+K FKTQ + EV++ S L H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 282 CHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-AR 339
+++ L GY + A R+ L+ E+ P G + L + + R A I A
Sbjct: 72 PNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL---SRFDEQRTATYITELAN 123
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L Y H + R++HRDIK N+LL N KI D G + + + SS + GT
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGT 173
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y PE D++S GV+ E + G P
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 208 IHGTIIRFSYSALEHATDKFSGSNIVGQG--GSSYVYRGQLTDGRIVAVKRF-KTQGGPN 264
+H T F + +D++ G ++G+G G + + ++T G+ AVK K Q
Sbjct: 32 LHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQK 90
Query: 265 AD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE 323
D L EV +L +L H +++ L EF + LV E G L D ++
Sbjct: 91 TDKESLLREVQLLKQLDHPNIMKLY----EFFEDKGYFYLVGEVYTGGEL---FDEIISR 143
Query: 324 GMNWDTRVAIAIGAA-RGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAK 379
+ A I G+ Y+H+ +I+HRD+K N+LL+ ++ N +I D G++
Sbjct: 144 KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLST 200
Query: 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+A S GT Y APE + G DV+S GV+L L++G P +
Sbjct: 201 HFEA------SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
+ + A+G+E+L A+ + +HRD+ + NILL E KI D G+A+ + D
Sbjct: 201 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVR 256
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
AR+ + APE ++ SDV+SFGV+L E+ + + + EE
Sbjct: 257 KGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--- 311
Query: 451 ATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYLAKECLQLDPDARPTMSEVVQILS 508
R GT R++ D+ EM Q M +C +P RPT SE+V+ L
Sbjct: 312 ---RRLKEGT--------RMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLG 356
Query: 509 TI 510
+
Sbjct: 357 NL 358
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 26/238 (10%)
Query: 208 IHGTIIRFSYSALEHATDKFSGSNIVGQG--GSSYVYRGQLTDGRIVAVKRF-KTQGGPN 264
+H T F + +D++ G ++G+G G + + ++T G+ AVK K Q
Sbjct: 9 LHATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQK 67
Query: 265 AD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE 323
D L EV +L +L H ++ L EF + LV E G L D ++
Sbjct: 68 TDKESLLREVQLLKQLDHPNIXKLY----EFFEDKGYFYLVGEVYTGGEL---FDEIISR 120
Query: 324 GMNWDTRVAIAIGAA-RGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAK 379
+ A I G+ Y H+ +I+HRD+K N+LL+ ++ N +I D G++
Sbjct: 121 KRFSEVDAARIIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
Query: 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+A S GT Y APE + G DV+S GV+L L++G P +
Sbjct: 178 HFEA------SKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 115/299 (38%), Gaps = 59/299 (19%)
Query: 233 VGQGGSSYVYRGQL--TDGRIV--AVKRFKTQ--GGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G V RG+ G+ V AVK K P A F+ EV+ + L H +++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G K +V E P G+L D L G + G T A+ A G+ Y
Sbjct: 76 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEGMGY 126
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + R +HRD+ + N+LL KI D G+ + L + ++ F +
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWC 181
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT----------GRQPIHRSITKGEESLVLWATP 453
APE S SD + FGV L E+ T G Q +H+ +GE
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE--------- 232
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAP 512
LP P D P++ +M +C P+ RPT + L P
Sbjct: 233 ----------RLPRPE---DCPQDIYNVMV----QCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 116/303 (38%), Gaps = 59/303 (19%)
Query: 233 VGQGGSSYVYRGQL--TDGRIV--AVKRFKTQ--GGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G V RG+ G+ V AVK K P A F+ EV+ + L H +++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G K +V E P G+L D L G + G T A+ A G+ Y
Sbjct: 86 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEGMGY 136
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + R +HRD+ + N+LL KI D G+ + L + ++ F +
Sbjct: 137 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 191
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT----------GRQPIHRSITKGEESLVLWATP 453
APE S SD + FGV L E+ T G Q +H+ +GE
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE--------- 242
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
LP P D P++ +M +C P+ RPT + L P
Sbjct: 243 ----------RLPRPE---DCPQDIYNVMV----QCWAHKPEDRPTFVALRDFLLEAQPT 285
Query: 514 KSR 516
R
Sbjct: 286 DMR 288
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
+ + A+G+E+L A+ + +HRD+ + NILL E KI D G+A+ + D
Sbjct: 203 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVR 258
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
AR+ + APE ++ SDV+SFGV+L E+ + + + EE
Sbjct: 259 KGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--- 313
Query: 451 ATPRLQDSGTVISELPDPRLKG-DFPKEEM-QIMAYLAKECLQLDPDARPTMSEVVQILS 508
R GT R++ D+ EM Q M +C +P RPT SE+V+ L
Sbjct: 314 ---RRLKEGT--------RMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLG 358
Query: 509 TI 510
+
Sbjct: 359 NL 360
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 50/306 (16%)
Query: 216 SYSALEHATDKFSGSNI------VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVF 269
S EH T + + +G G VY+ Q + ++A + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 270 LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDT 329
+ E+D+L+ H ++V L+ F + + +L+ EF G +D V++E T
Sbjct: 82 MVEIDILASCDHPNIVKLL---DAFYYENNLWILI-EFCAGG----AVDAVMLELERPLT 133
Query: 330 RVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389
I + + L+ L+ +I+HRD+K+ NIL + + K+ D G++ A +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTI 189
Query: 390 SSSPARMQGTFGYFAPEYAMVGRA-----SLMSDVFSFGVVLLELITGRQPIH-----RS 439
+ + GT + APE M + +DV+S G+ L+E+ P H R
Sbjct: 190 QRRDSFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 440 ITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT 499
+ K +S P L S D K+CL+ + DAR T
Sbjct: 249 LLKIAKS----EPPTLAQPSRWSSNFKD-----------------FLKKCLEKNVDARWT 287
Query: 500 MSEVVQ 505
S+++Q
Sbjct: 288 TSQLLQ 293
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 63/289 (21%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + V + + G+ VAVK KTQ ++ EV ++ L+H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-- 79
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
E LV E+ G + D L V M A ++Y H+
Sbjct: 80 --EVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQKF-- 133
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRL----KAD---GLPSCSSSPARMQGTFGYF 403
I+HRD+K+ N+LLD ++N KI D G + K D G P ++P QG Y
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPY-AAPELFQGK-KYD 190
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
PE DV+S GV+L L++G P G +
Sbjct: 191 GPE----------VDVWSLGVILYTLVSGSLPF---------------------DGQNLK 219
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKEC-------LQLDPDARPTMSEVVQ 505
EL + L+G + +I Y++ +C L L+P R T+ ++++
Sbjct: 220 ELRERVLRGKY-----RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 208 IHGTIIRFSYSALEHATDKFSGSNIVGQG--GSSYVYRGQLTDGRIVAVKRF-KTQGGPN 264
+H T F + +D++ G ++G+G G + + ++T G+ AVK K Q
Sbjct: 33 LHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQK 91
Query: 265 AD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE 323
D L EV +L +L H +++ L EF + LV E G L D ++
Sbjct: 92 TDKESLLREVQLLKQLDHPNIMKLY----EFFEDKGYFYLVGEVYTGGEL---FDEIISR 144
Query: 324 GMNWDTRVAIAIGAA-RGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAK 379
+ A I G+ Y+H+ +I+HRD+K N+LL+ ++ N +I D G++
Sbjct: 145 KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLST 201
Query: 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+A S GT Y APE + G DV+S GV+L L++G P +
Sbjct: 202 HFEA------SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 63/289 (21%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + V + + G+ VAVK KTQ ++ EV ++ L+H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-- 79
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
E LV E+ G + D L V M A ++Y H+
Sbjct: 80 --EVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQKF-- 133
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRL----KAD---GLPSCSSSPARMQGTFGYF 403
I+HRD+K+ N+LLD ++N KI D G + K D G P ++P QG Y
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY-AAPELFQGK-KYD 190
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
PE DV+S GV+L L++G P G +
Sbjct: 191 GPE----------VDVWSLGVILYTLVSGSLPF---------------------DGQNLK 219
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKEC-------LQLDPDARPTMSEVVQ 505
EL + L+G + +I Y++ +C L L+P R T+ ++++
Sbjct: 220 ELRERVLRGKY-----RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 30/219 (13%)
Query: 227 FSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCH 283
FS +G G VY + + + +VA+K+ G + + + EV L +L H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 284 VVPLVGYCSEFRG---KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARG 340
+ ++RG + LV E+ G+ D L+ V + + A+ GA +G
Sbjct: 77 TI-------QYRGCYLREHTAWLVMEYCL-GSASDLLE-VHKKPLQEVEIAAVTHGALQG 127
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L YLH + ++HRD+K+ NILL E K+ D G A S + GT
Sbjct: 128 LAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA---------SIMAPANXFVGTP 175
Query: 401 GYFAPEYAMV---GRASLMSDVFSFGVVLLELITGRQPI 436
+ APE + G+ DV+S G+ +EL + P+
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 115/299 (38%), Gaps = 59/299 (19%)
Query: 233 VGQGGSSYVYRGQL--TDGRIV--AVKRFKTQ--GGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G V RG+ G+ V AVK K P A F+ EV+ + L H +++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G K +V E P G+L D L G + G T A+ A G+ Y
Sbjct: 76 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEGMGY 126
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + R +HRD+ + N+LL KI D G+ + L + ++ F +
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 181
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT----------GRQPIHRSITKGEESLVLWATP 453
APE S SD + FGV L E+ T G Q +H+ +GE
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE--------- 232
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAP 512
LP P D P++ +M +C P+ RPT + L P
Sbjct: 233 ----------RLPRPE---DCPQDIYNVMV----QCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 63/289 (21%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + V + + G+ VAVK KTQ ++ EV ++ L+H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-- 79
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
E LV E+ G + D L V M A ++Y H+
Sbjct: 80 --EVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQKF-- 133
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRL----KAD---GLPSCSSSPARMQGTFGYF 403
I+HRD+K+ N+LLD ++N KI D G + K D G P ++P QG Y
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY-AAPELFQGK-KYD 190
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
PE DV+S GV+L L++G P G +
Sbjct: 191 GPE----------VDVWSLGVILYTLVSGSLPF---------------------DGQNLK 219
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKEC-------LQLDPDARPTMSEVVQ 505
EL + L+G + +I Y++ +C L L+P R T+ ++++
Sbjct: 220 ELRERVLRGKY-----RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K + + ++E+ M+++L H ++V L+G C+ L+FE+
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT----LSGPIYLIFEYCCY 133
Query: 311 GNLRDCL---------DGVLVEG------------MNWDTRVAIAIGAARGLEYLHEAAA 349
G+L + L D + E + ++ + A A+G+E+L +
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 350 PRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM 409
+HRD+ + N+L+ KI D G+A+ + +D AR+ + APE
Sbjct: 194 ---VHRDLAARNVLVTHGKVVKICDFGLARDIMSDS-NYVVRGNARL--PVKWMAPESLF 247
Query: 410 VGRASLMSDVFSFGVVLLELIT 431
G ++ SDV+S+G++L E+ +
Sbjct: 248 EGIYTIKSDVWSYGILLWEIFS 269
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 80
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 81 TE-----NPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ K+ D G+++ ++ S ++ + APE
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 187
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P K + + R+++ LP P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG----ERLPMP-- 234
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
+ P +M +C DP RP +E+ LSTI
Sbjct: 235 -PNCPPTLYSLMT----KCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 63/289 (21%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + V + + G+ VAVK KTQ ++ EV ++ L+H ++V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-- 72
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
E LV E+ G + D L V M A ++Y H+
Sbjct: 73 --EVIETEKTLYLVMEYASGGEVFDYL--VAHGWMKEKEARAKFRQIVSAVQYCHQKF-- 126
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRL----KAD---GLPSCSSSPARMQGTFGYF 403
I+HRD+K+ N+LLD ++N KI D G + K D G P ++P QG Y
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY-AAPELFQGK-KYD 183
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
PE DV+S GV+L L++G P G +
Sbjct: 184 GPE----------VDVWSLGVILYTLVSGSLPF---------------------DGQNLK 212
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKEC-------LQLDPDARPTMSEVVQ 505
EL + L+G + +I Y++ +C L L+P R T+ ++++
Sbjct: 213 ELRERVLRGKY-----RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 256
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 228 SGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
S + I+G G V++ + T G +A K KT+G + + V E+ ++++L H +++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV-KNEISVMNQLDHANLIQ 150
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW---DTRVAIAIGAARGLEY 343
L F K + +LV E++ G L D ++ E N DT + G+ +
Sbjct: 151 LY---DAFESKNDI-VLVMEYVDGGEL---FDRIIDESYNLTELDT-ILFMKQICEGIRH 202
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAK---ITDLGMAKRLKADGLPSCSSSPARMQGTF 400
+H+ ILH D+K NIL N +AK I D G+A+R K +++ F
Sbjct: 203 MHQMY---ILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKP---------REKLKVNF 249
Query: 401 G---YFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
G + APE S +D++S GV+ L++G P
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 30/219 (13%)
Query: 227 FSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCH 283
FS +G G VY + + + +VA+K+ G + + + EV L +L H +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 284 VVPLVGYCSEFRG---KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARG 340
+ ++RG + LV E+ G+ D L+ V + + A+ GA +G
Sbjct: 116 TI-------QYRGCYLREHTAWLVMEYC-LGSASDLLE-VHKKPLQEVEIAAVTHGALQG 166
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L YLH + ++HRD+K+ NILL E K+ D G A S + GT
Sbjct: 167 LAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA---------SIMAPANXFVGTP 214
Query: 401 GYFAPEYAMV---GRASLMSDVFSFGVVLLELITGRQPI 436
+ APE + G+ DV+S G+ +EL + P+
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 121/309 (39%), Gaps = 56/309 (18%)
Query: 216 SYSALEHATDKFSGSNI------VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVF 269
S EH T + + +G G VY+ Q + ++A + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 270 LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDT 329
+ E+D+L+ H ++V L+ F + + +L+ EF G +D V++E T
Sbjct: 82 MVEIDILASCDHPNIVKLL---DAFYYENNLWILI-EFCAGG----AVDAVMLELERPLT 133
Query: 330 RVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389
I + + L+ L+ +I+HRD+K+ NIL + + K+ D G++ + +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRR 192
Query: 390 SSSPARMQGTFGYFAPEYAMVGRA-----SLMSDVFSFGVVLLELITGRQPIHR------ 438
S GT + APE M + +DV+S G+ L+E+ P H
Sbjct: 193 DS----FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 439 --SITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA 496
I K E P L S D K+CL+ + DA
Sbjct: 249 LLKIAKSE-------PPTLAQPSRWSSNFKD-----------------FLKKCLEKNVDA 284
Query: 497 RPTMSEVVQ 505
R T S+++Q
Sbjct: 285 RWTTSQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 52/307 (16%)
Query: 216 SYSALEHATDKFSGSNI------VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVF 269
S EH T + + +G G VY+ Q + ++A + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 270 LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDT 329
+ E+D+L+ H ++V L+ F + + +L+ EF G +D V++E T
Sbjct: 82 MVEIDILASCDHPNIVKLL---DAFYYENNLWILI-EFCAGG----AVDAVMLELERPLT 133
Query: 330 RVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM-AKRLKADGLPS 388
I + + L+ L+ +I+HRD+K+ NIL + + K+ D G+ AK +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX----- 188
Query: 389 CSSSPARMQGTFGYFAPEYAMVGRA-----SLMSDVFSFGVVLLELITGRQPIH-----R 438
GT + APE M + +DV+S G+ L+E+ P H R
Sbjct: 189 -IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 439 SITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP 498
+ K +S P L S D K+CL+ + DAR
Sbjct: 248 VLLKIAKS----EPPTLAQPSRWSSNFKD-----------------FLKKCLEKNVDARW 286
Query: 499 TMSEVVQ 505
T S+++Q
Sbjct: 287 TTSQLLQ 293
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 121/282 (42%), Gaps = 54/282 (19%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCHVVPLVGY 290
VG G + QLT G VAVK Q + D V E+ L H H++ L
Sbjct: 21 VGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 291 CS---EFRGKRAMRLLVFEFMPNGNLRD--CLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
S +F +V E++ G L D C G VE M R+ I +A ++Y H
Sbjct: 80 ISTPTDF-------FMVMEYVSGGELFDYICKHG-RVEEME-ARRLFQQILSA--VDYCH 128
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG--LPSCSSSPARMQGTFGYF 403
++HRD+K N+LLD ++NAKI D G++ + +DG L + SP Y
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSN-MMSDGEFLRTSCGSP-------NYA 177
Query: 404 APEYAMVGR--ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461
APE + GR A D++S GV+L L+ G P E L+ R G V
Sbjct: 178 APE-VISGRLYAGPEVDIWSCGVILYALLCGTLPF-----DDEHVPTLFKKIR----GGV 227
Query: 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
P+ + +A L LQ+DP R T+ ++
Sbjct: 228 FY----------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 37/272 (13%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K+ + ++E+ ++S L H ++V L+G C+ L++ E+
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH----GGPVLVITEYCCY 126
Query: 311 GNLRDCL------DGVLVEGMNWDTRVAIAIGA--ARGLEYLHEAAAPRILHRDIKSSNI 362
G+L + L D +G + R + + A+G+ +L A+ +HRD+ + N+
Sbjct: 127 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 183
Query: 363 LLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSF 422
LL AKI D G+A+ + D AR+ + APE ++ SDV+S+
Sbjct: 184 LLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSY 240
Query: 423 GVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQI 481
G++L E+ + G P + + +L G ++ P PK I
Sbjct: 241 GILLWEIFSLGLNPYPGILVNSKFY-------KLVKDGY---QMAQPAFA---PKNIYSI 287
Query: 482 MAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513
M + C L+P RPT ++ L A +
Sbjct: 288 M----QACWALEPTHRPTFQQICSFLQEQAQE 315
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 60/275 (21%)
Query: 250 RIVAVKRFKTQGGPNADSVF--LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
RI++ ++F AD TE+++L +L+H ++ + + F + +V E
Sbjct: 180 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF---FDAEDYY--IVLEL 234
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL--- 364
M G L D + G + + T ++YLHE I+HRD+K N+LL
Sbjct: 235 MEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 289
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASL--MSDVFS 421
+E+ KITD G +K L L + GT Y APE + VG A D +S
Sbjct: 290 EEDCLIKITDFGHSKILGETSLMRT------LCGTPTYLAPEVLVSVGTAGYNRAVDCWS 343
Query: 422 FGVVLLELITGRQPI--HRS-------ITKGEESLV--LWATPRLQDSGTVISELPDPRL 470
GV+L ++G P HR+ IT G+ + + +WA E+ + L
Sbjct: 344 LGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA------------EVSEKAL 391
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
L K+ L +DP AR T E ++
Sbjct: 392 D-------------LVKKLLVVDPKARFTTEEALR 413
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377
DG E + + ++ + ARG+E+L ++ + +HRD+ + NILL EN KI D G+
Sbjct: 189 DGFYKEPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGL 245
Query: 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPI 436
A+ + + R+ + APE S SDV+S+GV+L E+ + G P
Sbjct: 246 ARDIYKNP-DYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
Query: 437 HRSITKGEESLVLWATPRLQDSGTVISELPDP-RLKGDFPKEEMQIMAYLAKECLQLDPD 495
P +Q S L + R++ P+ + + +C DP
Sbjct: 303 ----------------PGVQMDEDFCSRLREGMRMRA--PEYSTPEIYQIMLDCWHRDPK 344
Query: 496 ARPTMSEVVQILSTI 510
RP +E+V+ L +
Sbjct: 345 ERPRFAELVEKLGDL 359
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 141/357 (39%), Gaps = 68/357 (19%)
Query: 250 RIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308
R VAVK K + +TE+ +L+ + HH +VV L+G C++ G +++ E+
Sbjct: 58 RTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGP---LMVIVEYC 114
Query: 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNIL--LDE 366
GNL + L + R L +L++ AA LH + K + L++
Sbjct: 115 KYGNLSNYLK------------------SKRDLFFLNKDAA---LHMEPKKEKMEPGLEQ 153
Query: 367 NLNAKITDLGMAKRLKADGLPSCS--SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424
++ + ++ + G S + + G++ M L+S +SF V
Sbjct: 154 GKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITM---EDLIS--YSFQV 208
Query: 425 VL-LELITGRQPIHRSITKGEESLVLWATPRLQDSGTV--ISELPDPRLKGD--FPKEEM 479
+E ++ R+ IHR + L ++ D G I + PD KGD P
Sbjct: 209 ARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP---- 264
Query: 480 QIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRNISLNLFQIFSAGGMEKEPSI 539
+ ++A E I I KS + + L++IFS GG P +
Sbjct: 265 --LKWMAPE----------------SIFDKIYSTKSDVWSYGVLLWEIFSLGG-SPYPGV 305
Query: 540 ERPDNLFETLIESEELKKATSFGSPRCSQAVDTDITLNTRSNSKEEDTVSTEYMEKL 596
+ ++ L E + +A + +P Q I L+ +E E +EKL
Sbjct: 306 QMDEDFCSRLREGMRM-RAPEYSTPEIYQ-----IMLDCWHRDPKERPRFAELVEKL 356
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 41/260 (15%)
Query: 253 AVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311
AVK N D S L EV++L +L H +++ L E + +V E G
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGG 106
Query: 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL---DENL 368
L D + + + + I G+ Y+H+ I+HRD+K NILL +++
Sbjct: 107 ELFDEI--IKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161
Query: 369 NAKITDLGMAKRLKADGLPSCSSSPARMQ---GTFGYFAPEYAMVGRASLMSDVFSFGVV 425
+ KI D GL +C +M+ GT Y APE + G DV+S GV+
Sbjct: 162 DIKIIDF---------GLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVI 211
Query: 426 LLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYL 485
L L++G P + K E ++ + ++G +LP R D K+ L
Sbjct: 212 LYILLSGTPPFY---GKNEYDIL-----KRVETGKYAFDLPQWRTISDDAKD-------L 256
Query: 486 AKECLQLDPDARPTMSEVVQ 505
++ L P R T ++ ++
Sbjct: 257 IRKMLTFHPSLRITATQCLE 276
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----------MTG 210
Query: 399 ---TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWAT 452
T Y APE + M+ D++S G ++ EL+TGR P I + ++ + L T
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 453 PRLQDSGTVISELPDPRLKG------DFPKEEMQ--------IMAYLAKECLQLDPDARP 498
P +VIS +P + PK + L ++ L LD D R
Sbjct: 271 P----PASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRI 326
Query: 499 TMSEVV 504
T SE +
Sbjct: 327 TASEAL 332
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 114/294 (38%), Gaps = 59/294 (20%)
Query: 233 VGQGGSSYVYRGQL--TDGRIV--AVKRFKTQ--GGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G V RG+ G+ V AVK K P A F+ EV+ + L H +++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G K +V E P G+L D L G + G T A+ A G+ Y
Sbjct: 80 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEGMGY 130
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + R +HRD+ + N+LL KI D G+ + L + ++ F +
Sbjct: 131 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 185
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT----------GRQPIHRSITKGEESLVLWATP 453
APE S SD + FGV L E+ T G Q +H+ +GE
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE--------- 236
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
LP P D P++ +M +C P+ RPT + L
Sbjct: 237 ----------RLPRPE---DCPQDIYNVMV----QCWAHKPEDRPTFVALRDFL 273
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 63/289 (21%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + V + + G+ VAV+ KTQ ++ EV ++ L+H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-- 79
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
E LV E+ G + D L V M A ++Y H+
Sbjct: 80 --EVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQKF-- 133
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRL----KAD---GLPSCSSSPARMQGTFGYF 403
I+HRD+K+ N+LLD ++N KI D G + K D G P ++P QG Y
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPY-AAPELFQGK-KYD 190
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
PE DV+S GV+L L++G P G +
Sbjct: 191 GPE----------VDVWSLGVILYTLVSGSLPF---------------------DGQNLK 219
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKEC-------LQLDPDARPTMSEVVQ 505
EL + L+G + +I Y++ +C L L+P R T+ ++++
Sbjct: 220 ELRERVLRGKY-----RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 120/282 (42%), Gaps = 54/282 (19%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCHVVPLVGY 290
VG G + QLT G VAVK Q + D V E+ L H H++ L
Sbjct: 21 VGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 291 CS---EFRGKRAMRLLVFEFMPNGNLRD--CLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
S +F +V E++ G L D C G VE M R+ I +A ++Y H
Sbjct: 80 ISTPTDF-------FMVMEYVSGGELFDYICKHG-RVEEME-ARRLFQQILSA--VDYCH 128
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG--LPSCSSSPARMQGTFGYF 403
++HRD+K N+LLD ++NAKI D G++ + +DG L SP Y
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSN-MMSDGEFLRDSCGSP-------NYA 177
Query: 404 APEYAMVGR--ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461
APE + GR A D++S GV+L L+ G P E L+ R G V
Sbjct: 178 APE-VISGRLYAGPEVDIWSCGVILYALLCGTLPF-----DDEHVPTLFKKIR----GGV 227
Query: 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
P+ + +A L LQ+DP R T+ ++
Sbjct: 228 FY----------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 60/275 (21%)
Query: 250 RIVAVKRFKTQGGPNADSVF--LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
RI++ ++F AD TE+++L +L+H ++ + + F + +V E
Sbjct: 166 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF---FDAEDYY--IVLEL 220
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL--- 364
M G L D + G + + T ++YLHE I+HRD+K N+LL
Sbjct: 221 MEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 275
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASL--MSDVFS 421
+E+ KITD G +K L L + GT Y APE + VG A D +S
Sbjct: 276 EEDCLIKITDFGHSKILGETSLMRT------LCGTPTYLAPEVLVSVGTAGYNRAVDCWS 329
Query: 422 FGVVLLELITGRQPI--HRS-------ITKGEESLV--LWATPRLQDSGTVISELPDPRL 470
GV+L ++G P HR+ IT G+ + + +WA E+ + L
Sbjct: 330 LGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA------------EVSEKAL 377
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
L K+ L +DP AR T E ++
Sbjct: 378 D-------------LVKKLLVVDPKARFTTEEALR 399
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 63/289 (21%)
Query: 233 VGQGGSSYVYRGQ-LTDGRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290
+G+G + V + + G+ VAV+ KTQ ++ EV ++ L+H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-- 79
Query: 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAP 350
E LV E+ G + D L V M A ++Y H+
Sbjct: 80 --EVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQKF-- 133
Query: 351 RILHRDIKSSNILLDENLNAKITDLGMAKRL----KAD---GLPSCSSSPARMQGTFGYF 403
I+HRD+K+ N+LLD ++N KI D G + K D G P ++P QG Y
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY-AAPELFQGK-KYD 190
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463
PE DV+S GV+L L++G P G +
Sbjct: 191 GPE----------VDVWSLGVILYTLVSGSLPF---------------------DGQNLK 219
Query: 464 ELPDPRLKGDFPKEEMQIMAYLAKEC-------LQLDPDARPTMSEVVQ 505
EL + L+G + +I Y++ +C L L+P R T+ ++++
Sbjct: 220 ELRERVLRGKY-----RIPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 233 VGQGGSSYVYRGQLT--DGRIV--AVKRFKTQ--GGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G V RG+ G+ V AVK K P A F+ EV+ + L H +++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEY 343
L G K +V E P G+L D L G + G T A+ A G+ Y
Sbjct: 76 LYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLG----TLSRYAVQVAEGMGY 126
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYF 403
L + R +HRD+ + N+LL KI D G+ + L + ++ F +
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 181
Query: 404 APEYAMVGRASLMSDVFSFGVVLLELIT----------GRQPIHRSITKGEESLVLWATP 453
APE S SD + FGV L E+ T G Q +H+ +GE
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE--------- 232
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500
LP P D P++ +M +C P+ RPT
Sbjct: 233 ----------RLPRPE---DCPQDIYNVMV----QCWAHKPEDRPTF 262
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 35/181 (19%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ- 397
RGL+Y+H A +++HRD+K SN+L++EN KI D GMA+ L C +SPA Q
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL-------C-TSPAEHQY 218
Query: 398 ------GTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGRQ--PIHRSITKGEESLV 448
T Y APE + + + D++S G + E++ RQ P + + + ++
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 278
Query: 449 LWATPR---LQDSG-----TVISELPDPR----LKGDFPKEEMQIMAYLAKECLQLDPDA 496
+ TP +Q G I LP PR + +P + Q ++ L + L+ +P A
Sbjct: 279 VLGTPSPAVIQAVGAERVRAYIQSLP-PRQPVPWETVYPGADRQALSLLGR-MLRFEPSA 336
Query: 497 R 497
R
Sbjct: 337 R 337
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 114/280 (40%), Gaps = 34/280 (12%)
Query: 234 GQGGSSY--VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291
GQ G + +Y VA+K K + FL E + + H H+V L+G
Sbjct: 401 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 460
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPR 351
+E ++ E G LR L V ++ + + A + L YL + R
Sbjct: 461 TE-----NPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLE---SKR 511
Query: 352 ILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG 411
+HRDI + N+L+ K+ D G+++ ++ S ++ + APE
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFR 567
Query: 412 RASLMSDVFSFGVVLLE-LITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470
R + SDV+ FGV + E L+ G +P + + + R+++ LP P
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPF-QGVKNND------VIGRIENG----ERLPMP-- 614
Query: 471 KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
P + + + K C DP RP +E+ LSTI
Sbjct: 615 ----PNCPPTLYSLMTK-CWAYDPSRRPRFTELKAQLSTI 649
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 267 SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN 326
+ F E D+++ + VV L +C+ F+ + + +V E+MP G+L + + V
Sbjct: 120 AFFWEERDIMAFANSPWVVQL--FCA-FQDDKYL-YMVMEYMPGGDLVNLMSNYDVPE-K 174
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386
W + A L+ +H ++HRD+K N+LLD++ + K+ D G ++ G+
Sbjct: 175 WAKFYTAEVVLA--LDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 229
Query: 387 PSCSSSPARMQGTFGYFAPEYAMV----GRASLMSDVFSFGVVLLELITGRQPIHRSITK 442
C ++ GT Y +PE G D +S GV L E++ G P +
Sbjct: 230 VHCDTA----VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV 285
Query: 443 GEESLVL 449
G S ++
Sbjct: 286 GTYSKIM 292
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLHHCHVVPLVGYC 291
+ + S +++G+ G + VK K + S F E L H +V+P++G C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW----DTRVAIAIGAARGLEYLHEA 347
L+ +MP G+L + VL EG N+ V A+ ARG+ +LH
Sbjct: 77 QSPPAPHPT--LITHWMPYGSLYN----VLHEGTNFVVDQSQAVKFALDMARGMAFLH-T 129
Query: 348 AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEY 407
P I + S ++++DE++ A+I+ MA + SP RM + APE
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARIS---MA------DVKFSFQSPGRMYAP-AWVAPEA 179
Query: 408 AM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462
R S +D++SF V+L EL+T P ++ E + ++ G
Sbjct: 180 LQKKPEDTNRRS--ADMWSFAVLLWELVTREVPF-ADLSNMEIGM------KVALEG--- 227
Query: 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510
L+ P ++ L K C+ DP RP +V IL +
Sbjct: 228 -------LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 267 SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE--- 323
+ F E D+++ + VV L F+ R + +V E+MP G+L + + V
Sbjct: 114 AFFWEERDIMAFANSPWVVQLF---YAFQDDRYL-YMVMEYMPGGDLVNLMSNYDVPEKW 169
Query: 324 GMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383
+ V +A+ A + ++H RD+K N+LLD++ + K+ D G ++
Sbjct: 170 ARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK 220
Query: 384 DGLPSCSSSPARMQGTFGYFAPEYAMV----GRASLMSDVFSFGVVLLELITGRQPIHRS 439
+G+ C ++ GT Y +PE G D +S GV L E++ G P +
Sbjct: 221 EGMVRCDTA----VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276
Query: 440 ITKGEESLVL 449
G S ++
Sbjct: 277 SLVGTYSKIM 286
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 267 SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE--- 323
+ F E D+++ + VV L F+ R + +V E+MP G+L + + V
Sbjct: 119 AFFWEERDIMAFANSPWVVQLF---YAFQDDRYL-YMVMEYMPGGDLVNLMSNYDVPEKW 174
Query: 324 GMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383
+ V +A+ A + ++H RD+K N+LLD++ + K+ D G ++
Sbjct: 175 ARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK 225
Query: 384 DGLPSCSSSPARMQGTFGYFAPEYAMV----GRASLMSDVFSFGVVLLELITGRQPIHRS 439
+G+ C ++ GT Y +PE G D +S GV L E++ G P +
Sbjct: 226 EGMVRCDTA----VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
Query: 440 ITKGEESLVL 449
G S ++
Sbjct: 282 SLVGTYSKIM 291
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 35/181 (19%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ- 397
RGL+Y+H A +++HRD+K SN+L++EN KI D GMA+ L C +SPA Q
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL-------C-TSPAEHQY 217
Query: 398 ------GTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGRQ--PIHRSITKGEESLV 448
T Y APE + + + D++S G + E++ RQ P + + + ++
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277
Query: 449 LWATPR---LQDSG-----TVISELPDPR----LKGDFPKEEMQIMAYLAKECLQLDPDA 496
+ TP +Q G I LP PR + +P + Q ++ L + L+ +P A
Sbjct: 278 VLGTPSPAVIQAVGAERVRAYIQSLP-PRQPVPWETVYPGADRQALSLLGR-MLRFEPSA 335
Query: 497 R 497
R
Sbjct: 336 R 336
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 267 SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE--- 323
+ F E D+++ + VV L F+ R + +V E+MP G+L + + V
Sbjct: 119 AFFWEERDIMAFANSPWVVQLF---YAFQDDRYL-YMVMEYMPGGDLVNLMSNYDVPEKW 174
Query: 324 GMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383
+ V +A+ A + ++H RD+K N+LLD++ + K+ D G ++
Sbjct: 175 ARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK 225
Query: 384 DGLPSCSSSPARMQGTFGYFAPEYAMV----GRASLMSDVFSFGVVLLELITGRQPIHRS 439
+G+ C ++ GT Y +PE G D +S GV L E++ G P +
Sbjct: 226 EGMVRCDTA----VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
Query: 440 ITKGEESLVL 449
G S ++
Sbjct: 282 SLVGTYSKIM 291
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K ++E+ +LS L +H ++V L+G C+ L++ E+
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVITEYCCY 134
Query: 311 GNLRDCLDGVLVEGMNWDTRVAI----------------AIGAARGLEYLHEAAAPRILH 354
G+L + L + T AI + A+G+ +L A+ +H
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 191
Query: 355 RDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
RD+ + NILL KI D G+A+ +K D + AR+ + APE +
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN-ARL--PVKWMAPESIFNCVYT 248
Query: 415 LMSDVFSFGVVLLELIT-GRQP---------IHRSITKGEESLVLWATPRLQDSGTVISE 464
SDV+S+G+ L EL + G P ++ I +G L +P
Sbjct: 249 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML----SPE---------- 294
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
P E IM K C DP RPT ++VQ++
Sbjct: 295 --------HAPAEMYDIM----KTCWDADPLKRPTFKQIVQLI 325
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 263 PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLV 322
PN ++ E+ +L RL H +V+ LV + ++ +V E+ G +++ LD V
Sbjct: 47 PNGEANVKKEIQLLRRLRHKNVIQLVDVL--YNEEKQKMYMVMEYCVCG-MQEMLDSVPE 103
Query: 323 EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382
+ GLEYLH I+H+DIK N+LL KI+ LG+A+ L
Sbjct: 104 KRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 383 ---ADGLPSCSSSPARMQGTFGYFAPEYA--MVGRASLMSDVFSFGVVLLELITGRQPI 436
AD +C +S QG+ + PE A + + D++S GV L + TG P
Sbjct: 161 PFAADD--TCRTS----QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG--LPSCSSSPARMQ 397
+EY H +I+HRD+K N+LLD+NLN KI D G++ + DG L + SP
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDGNFLKTSCGSP---- 171
Query: 398 GTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQP 435
Y APE + G+ A DV+S G+VL ++ GR P
Sbjct: 172 ---NYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 250 RIVAVKRFKTQGGPNADSVF--LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
+I++ ++F AD TE+++L +L+H ++ + + F + +V E
Sbjct: 40 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF---FDAEDYY--IVLEL 94
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL--- 364
M G L D + G + + T ++YLHE I+HRD+K N+LL
Sbjct: 95 MEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 149
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASL--MSDVFS 421
+E+ KITD G +K L L + GT Y APE + VG A D +S
Sbjct: 150 EEDCLIKITDFGHSKILGETSLMRT------LCGTPTYLAPEVLVSVGTAGYNRAVDCWS 203
Query: 422 FGVVLLELITGRQPI--HRS-------ITKGEESLV--LWA 451
GV+L ++G P HR+ IT G+ + + +WA
Sbjct: 204 LGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 112/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 139 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAKRLKADGL---PSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ + G C+ P +
Sbjct: 195 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 252 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 288
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 289 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 338
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 112/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 116 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAKRLKADGL---PSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ + G C+ P +
Sbjct: 172 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 229 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 265
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 266 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 315
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 250 RIVAVKRFKTQGGPNADSVF--LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
+I++ ++F AD TE+++L +L+H ++ + + F + +V E
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF---FDAEDYY--IVLEL 95
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL--- 364
M G L D + G + + T ++YLHE I+HRD+K N+LL
Sbjct: 96 MEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 150
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASL--MSDVFS 421
+E+ KITD G +K L L + GT Y APE + VG A D +S
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRT------LCGTPTYLAPEVLVSVGTAGYNRAVDCWS 204
Query: 422 FGVVLLELITGRQPI--HRS-------ITKGEESLV--LWA 451
GV+L ++G P HR+ IT G+ + + +WA
Sbjct: 205 LGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 331 VAIAIGA-ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389
V I +G LE+LH+ I++RDIK NILLD N + +TD G++K AD
Sbjct: 161 VQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD----E 213
Query: 390 SSSPARMQGTFGYFAPEYAMVGRASL--MSDVFSFGVVLLELITGRQPI 436
+ GT Y AP+ G + D +S GV++ EL+TG P
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 250 RIVAVKRFKTQGGPNADSVF--LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
+I++ ++F AD TE+++L +L+H ++ + + F + +V E
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF---FDAEDYY--IVLEL 95
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL--- 364
M G L D + G + + T ++YLHE I+HRD+K N+LL
Sbjct: 96 MEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 150
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASL--MSDVFS 421
+E+ KITD G +K L L + GT Y APE + VG A D +S
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRT------LCGTPTYLAPEVLVSVGTAGYNRAVDCWS 204
Query: 422 FGVVLLELITGRQPI--HRS-------ITKGEESLV--LWA 451
GV+L ++G P HR+ IT G+ + + +WA
Sbjct: 205 LGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 20/230 (8%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLHHCH 283
K+ +GQG V++ + G+ VA+K+ + + L E+ +L L H +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 284 VVPLVGYC----SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR 339
VV L+ C S + +A LVF+F + +L L VLV+ + + + +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM-LLN 136
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG- 398
GL Y+H +ILHRD+K++N+L+ + K+ D G+A+ + +S P R
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL----AKNSQPNRYXNR 189
Query: 399 --TFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445
T Y PE + R D++ G ++ E+ T R PI + T+ +
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 250 RIVAVKRFKTQGGPNADSVF--LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
+I++ ++F AD TE+++L +L+H ++ + + F + +V E
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF---FDAEDYY--IVLEL 95
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL--- 364
M G L D + G + + T ++YLHE I+HRD+K N+LL
Sbjct: 96 MEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 150
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASL--MSDVFS 421
+E+ KITD G +K L L + GT Y APE + VG A D +S
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRT------LCGTPTYLAPEVLVSVGTAGYNRAVDCWS 204
Query: 422 FGVVLLELITGRQPI--HRS-------ITKGEESLV--LWA 451
GV+L ++G P HR+ IT G+ + + +WA
Sbjct: 205 LGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L+YLH + +++RD+K N++LD++ + KITD G+ K DG ++ GT
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-----ATMKXFCGT 172
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS- 458
Y APE D + GVV+ E++ GR P + + L+L R +
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 232
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQ 491
G L LK D PK+ + + AKE +Q
Sbjct: 233 GPEAKSLLSGLLKKD-PKQRLGGGSEDAKEIMQ 264
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K ++E+ +LS L +H ++V L+G C+ L++ E+
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVITEYCCY 111
Query: 311 GNLRDCLDGVLVEGMNWDTRVAI----------------AIGAARGLEYLHEAAAPRILH 354
G+L + L + T AI + A+G+ +L A+ +H
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 168
Query: 355 RDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
RD+ + NILL KI D G+A+ +K D + AR+ + APE +
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN-ARLP--VKWMAPESIFNCVYT 225
Query: 415 LMSDVFSFGVVLLELIT-GRQP---------IHRSITKGEESLVLWATPRLQDSGTVISE 464
SDV+S+G+ L EL + G P ++ I +G L +P
Sbjct: 226 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML----SPEHA-------- 273
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
P E IM K C DP RPT ++VQ++
Sbjct: 274 ----------PAEMYDIM----KTCWDADPLKRPTFKQIVQLI 302
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L+YLH + +++RD+K N++LD++ + KITD G+ K DG ++ GT
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-----ATMKXFCGT 174
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS- 458
Y APE D + GVV+ E++ GR P + + L+L R +
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 234
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQ 491
G L LK D PK+ + + AKE +Q
Sbjct: 235 GPEAKSLLSGLLKKD-PKQRLGGGSEDAKEIMQ 266
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 33/281 (11%)
Query: 231 NIVGQGGSSYVYRGQLT--DGR--IVAVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVV 285
I+G+G V G L DG VAVK K + FL+E + H +V+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 286 PLVGYCSEFRGKRAMR-LLVFEFMPNGNLRDCLDGVLVE----GMNWDTRVAIAIGAARG 340
L+G C E + + +++ FM G+L L +E + T + + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
+EYL + LHRD+ + N +L +++ + D G++K++ + G A+M
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYS-GDYYRQGRIAKM--PV 213
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460
+ A E + SDV++FGV + E+ T R +T P +Q+
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIAT------RGMT---------PYPGVQNHEM 258
Query: 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS 501
L RLK P++ + + + C + DP RPT S
Sbjct: 259 YDYLLHGHRLKQ--PEDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K ++E+ +LS L +H ++V L+G C+ L++ E+
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVITEYCCY 127
Query: 311 GNLRDCLDGVLVEGMNWDTRVAI----------------AIGAARGLEYLHEAAAPRILH 354
G+L + L + T AI + A+G+ +L A+ +H
Sbjct: 128 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 184
Query: 355 RDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
RD+ + NILL KI D G+A+ +K D + AR+ + APE +
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN-ARL--PVKWMAPESIFNCVYT 241
Query: 415 LMSDVFSFGVVLLELIT-GRQP---------IHRSITKGEESLVLWATPRLQDSGTVISE 464
SDV+S+G+ L EL + G P ++ I +G L +P
Sbjct: 242 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML----SPE---------- 287
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
P E IM K C DP RPT ++VQ++
Sbjct: 288 --------HAPAEMYDIM----KTCWDADPLKRPTFKQIVQLI 318
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 118/302 (39%), Gaps = 65/302 (21%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLT-EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
G V V+R + N FL E+ + +H ++VP Y + F + +V F
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP---YRATFIADNEL-WVVTSF 91
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
M G+ +D + ++GMN I G + L+Y+H +HR +K+S+IL+ +
Sbjct: 92 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVD 148
Query: 368 LNAKITDL---------GMAKRLKADGLPSCSS------SPARMQGTF-GYFAPEYAMVG 411
++ L G +R+ D P S SP +Q GY A
Sbjct: 149 GKVYLSGLRSNLSMISHGQRQRVVHD-FPKYSVKVLPWLSPEVLQQNLQGYDA------- 200
Query: 412 RASLMSDVFSFGVVLLELITGRQPIHR--------------------SITKGEESLVLWA 451
SD++S G+ EL G P + T E L +
Sbjct: 201 ----KSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSP 256
Query: 452 TPRLQDSG---TVISELPDPRLKGDFPKEEMQ-----IMAYLAKECLQLDPDARPTMSEV 503
+ + +SG ++ + P P GD P + ++CLQ +PDARP+ S +
Sbjct: 257 SRSVANSGLSDSLTTSTPRPS-NGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL 315
Query: 504 VQ 505
+
Sbjct: 316 LN 317
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L+YLH + +++RD+K N++LD++ + KITD G+ K DG ++ GT
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-----ATMKTFCGT 315
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS- 458
Y APE D + GVV+ E++ GR P + + L+L R +
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 375
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQ 491
G L LK D PK+ + + AKE +Q
Sbjct: 376 GPEAKSLLSGLLKKD-PKQRLGGGSEDAKEIMQ 407
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L+YLH + +++RD+K N++LD++ + KITD G+ K DG ++ GT
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-----ATMKTFCGT 312
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS- 458
Y APE D + GVV+ E++ GR P + + L+L R +
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 372
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQ 491
G L LK D PK+ + + AKE +Q
Sbjct: 373 GPEAKSLLSGLLKKD-PKQRLGGGSEDAKEIMQ 404
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L+YLH + +++RD+K N++LD++ + KITD G+ K DG ++ GT
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-----ATMKXFCGT 173
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS- 458
Y APE D + GVV+ E++ GR P + + L+L R +
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 233
Query: 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQ 491
G L LK D PK+ + + AKE +Q
Sbjct: 234 GPEAKSLLSGLLKKD-PKQRLGGGSEDAKEIMQ 265
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSE----------------- 293
VAVK K+ + ++E+ ++S L H ++V L+G C+
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 294 -FRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352
F ++A +L P G + LD + + + A+G+ +L A+
Sbjct: 124 NFLRRKAEAMLGPSLAP-GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNC 179
Query: 353 LHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR 412
+HRD+ + N+LL AKI D G+A+ + D AR+ + APE
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARL--PVKWMAPESIFDCV 236
Query: 413 ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLK 471
++ SDV+S+G++L E+ + G P + + +L G ++ P
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY-------KLVKDGY---QMAQPAFA 286
Query: 472 GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSR 516
PK IM + C L+P RPT ++ L A + R
Sbjct: 287 ---PKNIYSIM----QACWALEPTHRPTFQQICSFLQEQAQEDRR 324
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 118/302 (39%), Gaps = 65/302 (21%)
Query: 249 GRIVAVKRFKTQGGPNADSVFLT-EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
G V V+R + N FL E+ + +H ++VP Y + F + +V F
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP---YRATFIADNEL-WVVTSF 107
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367
M G+ +D + ++GMN I G + L+Y+H +HR +K+S+IL+ +
Sbjct: 108 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVD 164
Query: 368 LNAKITDL---------GMAKRLKADGLPSCSS------SPARMQGTF-GYFAPEYAMVG 411
++ L G +R+ D P S SP +Q GY A
Sbjct: 165 GKVYLSGLRSNLSMISHGQRQRVVHD-FPKYSVKVLPWLSPEVLQQNLQGYDA------- 216
Query: 412 RASLMSDVFSFGVVLLELITGRQPIHR--------------------SITKGEESLVLWA 451
SD++S G+ EL G P + T E L +
Sbjct: 217 ----KSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSP 272
Query: 452 TPRLQDSG---TVISELPDPRLKGDFPKEEMQ-----IMAYLAKECLQLDPDARPTMSEV 503
+ + +SG ++ + P P GD P + ++CLQ +PDARP+ S +
Sbjct: 273 SRSVANSGLSDSLTTSTPRPS-NGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL 331
Query: 504 VQ 505
+
Sbjct: 332 LN 333
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K ++E+ +LS L +H ++V L+G C+ L++ E+
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVITEYCCY 134
Query: 311 GNLRDCLDGVLVEGMNWDTRVAI----------------AIGAARGLEYLHEAAAPRILH 354
G+L + L + T AI + A+G+ +L A+ +H
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 191
Query: 355 RDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
RD+ + NILL KI D G+A+ +K D + AR+ + APE +
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN-ARL--PVKWMAPESIFNCVYT 248
Query: 415 LMSDVFSFGVVLLELIT-GRQP---------IHRSITKGEESLVLWATPRLQDSGTVISE 464
SDV+S+G+ L EL + G P ++ I +G L +P
Sbjct: 249 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML----SPE---------- 294
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
P E IM K C DP RPT ++VQ++
Sbjct: 295 --------HAPAEMYDIM----KTCWDADPLKRPTFKQIVQLI 325
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 250 RIVAVKRFKTQGGPNADSVF--LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
+I++ ++F AD TE+++L +L+H ++ + + F + +V E
Sbjct: 47 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF---FDAEDYY--IVLEL 101
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL--- 364
M G L D + G + + T ++YLHE I+HRD+K N+LL
Sbjct: 102 MEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 156
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASL--MSDVFS 421
+E+ KITD G +K L L + GT Y APE + VG A D +S
Sbjct: 157 EEDCLIKITDFGHSKILGETSLMRT------LCGTPTYLAPEVLVSVGTAGYNRAVDCWS 210
Query: 422 FGVVLLELITGRQPI--HRS-------ITKGEESLV--LWA 451
GV+L ++G P HR+ IT G+ + + +WA
Sbjct: 211 LGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH + +++RDIK N++LD++ + KITD G+ K +DG ++ GT
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-----ATMKXFCGT 168
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE D + GVV+ E++ GR P +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 252 VAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310
VAVK K ++E+ +LS L +H ++V L+G C+ L++ E+
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVITEYCCY 129
Query: 311 GNLRDCLDGVLVEGMNWDTRVAI----------------AIGAARGLEYLHEAAAPRILH 354
G+L + L + T AI + A+G+ +L A+ +H
Sbjct: 130 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 186
Query: 355 RDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
RD+ + NILL KI D G+A+ +K D + AR+ + APE +
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN-ARL--PVKWMAPESIFNCVYT 243
Query: 415 LMSDVFSFGVVLLELIT-GRQP---------IHRSITKGEESLVLWATPRLQDSGTVISE 464
SDV+S+G+ L EL + G P ++ I +G L +P
Sbjct: 244 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML----SPE---------- 289
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
P E IM K C DP RPT ++VQ++
Sbjct: 290 --------HAPAEMYDIM----KTCWDADPLKRPTFKQIVQLI 320
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 66/348 (18%)
Query: 247 TDGRIVAVKRFKTQGGPNADSVF----LTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302
DGR A K P +F E+ +L + H +V+ L+
Sbjct: 45 VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV------------ 92
Query: 303 LVFEFMPNGNLRDCLDGVLV--------------EGMNWDTRVAIAIGAARGLEYLHEAA 348
F P+ L D D LV E + D + +GL Y+H A
Sbjct: 93 ----FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 349 APRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG---TFGYFAP 405
I+HRD+K N+ ++E+ KI D G+A+ +AD + M G T Y AP
Sbjct: 149 ---IIHRDLKPGNLAVNEDCELKILDFGLAR--QAD---------SEMXGXVVTRWYRAP 194
Query: 406 EYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464
E + R + D++S G ++ E+ITG +++ KG + L ++ +GT +E
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITG-----KTLFKGSDHLDQLKEI-MKVTGTPPAE 248
Query: 465 LPDPRLKGDFPKEEMQIMAYLAKECL-QLDPDARPTMSEVVQILSTIAPDKSRRRNISLN 523
RL+ D K M+ + L K+ + +A P +++ + + ++ +L
Sbjct: 249 FVQ-RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307
Query: 524 LFQIFSAGGMEKEPSIERPDNLFETLIES-EELKKAT-----SFGSPR 565
S E EP +++ D+ F+ + + +E K+ T SF PR
Sbjct: 308 HPYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWKRVTYKEVLSFKPPR 355
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
E+ +L +L H +VV LV + +VFE + G + + ++ ++ D
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDD--PNEDHLYMVFELVNQGPVMEV---PTLKPLSEDQAR 140
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK-ADGLPSCS 390
+G+EYLH +I+HRDIK SN+L+ E+ + KI D G++ K +D L S +
Sbjct: 141 FYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMS---DVFSFGVVLLELITGRQPI 436
GT + APE R DV++ GV L + G+ P
Sbjct: 198 V------GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH + +++RDIK N++LD++ + KITD G+ K +DG ++ GT
Sbjct: 122 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-----ATMKXFCGT 173
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE D + GVV+ E++ GR P +
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLAR--VADPDHDHTGFLTEYVA 189
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 250 EDLNXIIN 257
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH + +++RDIK N++LD++ + KITD G+ K +DG ++ GT
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-----ATMKXFCGT 168
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE D + GVV+ E++ GR P +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 46/238 (19%)
Query: 225 DKFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPN--ADSV------FLTEVDM 275
+ + I+G+G SS V R + AVK GG + A+ V L EVD+
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 276 LSRLH-HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
L ++ H +++ L + LVF+ M G L D L + ++ A
Sbjct: 64 LRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ LE + I+HRD+K NILLD+++N K+TD G SC P
Sbjct: 120 L-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF----------SCQLDPG 164
Query: 395 ----RMQGTFGYFAPE---------YAMVGRASLMSDVFSFGVVLLELITGRQPI-HR 438
+ GT Y APE + G+ D++S GV++ L+ G P HR
Sbjct: 165 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKE---VDMWSTGVIMYTLLAGSPPFWHR 219
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH + +++RDIK N++LD++ + KITD G+ K +DG ++ GT
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-----ATMKXFCGT 168
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE D + GVV+ E++ GR P +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH + +++RDIK N++LD++ + KITD G+ K +DG ++ GT
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-----ATMKTFCGT 168
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE D + GVV+ E++ GR P +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH + +++RDIK N++LD++ + KITD G+ K +DG ++ GT
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-----ATMKTFCGT 168
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE D + GVV+ E++ GR P +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L YLHE I++RD+K N+LLD + K+TD GM K +GL ++ + GT
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTT-SXFCGT 184
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE D ++ GV++ E++ GR P
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH + +++RDIK N++LD++ + KITD G+ K +DG ++ GT
Sbjct: 120 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-----ATMKTFCGT 171
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
Y APE D + GVV+ E++ GR P +
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 46/238 (19%)
Query: 225 DKFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPN--ADSV------FLTEVDM 275
+ + I+G+G SS V R + AVK GG + A+ V L EVD+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 276 LSRLH-HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
L ++ H +++ L + LVF+ M G L D L + ++ A
Sbjct: 77 LRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ LE + I+HRD+K NILLD+++N K+TD G SC P
Sbjct: 133 L-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF----------SCQLDPG 177
Query: 395 R----MQGTFGYFAPE---------YAMVGRASLMSDVFSFGVVLLELITGRQPI-HR 438
+ GT Y APE + G+ D++S GV++ L+ G P HR
Sbjct: 178 EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKE---VDMWSTGVIMYTLLAGSPPFWHR 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 46/238 (19%)
Query: 225 DKFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPN--ADSV------FLTEVDM 275
+ + I+G+G SS V R + AVK GG + A+ V L EVD+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 276 LSRLH-HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIA 334
L ++ H +++ L + LVF+ M G L D L + ++ A
Sbjct: 77 LRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 335 IGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ LE + I+HRD+K NILLD+++N K+TD G SC P
Sbjct: 133 L-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF----------SCQLDPG 177
Query: 395 ----RMQGTFGYFAPE---------YAMVGRASLMSDVFSFGVVLLELITGRQPI-HR 438
+ GT Y APE + G+ D++S GV++ L+ G P HR
Sbjct: 178 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKE---VDMWSTGVIMYTLLAGSPPFWHR 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR--VADPDHDHTGFLTEYVA 189
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 250 EDLNXIIN 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L YLHE I++RD+K N+LLD + K+TD GM K +GL ++ + GT
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTT-SXFCGT 173
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE D ++ GV++ E++ GR P
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L YLHE I++RD+K N+LLD + K+TD GM K +GL ++ + GT
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTT-SXFCGT 169
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE D ++ GV++ E++ GR P
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L YLHE I++RD+K N+LLD + K+TD GM K +GL ++ + GT
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTT-STFCGT 216
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE D ++ GV++ E++ GR P
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 20/230 (8%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLHHCH 283
K+ +GQG V++ + G+ VA+K+ + + L E+ +L L H +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 284 VVPLVGYC----SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR 339
VV L+ C S + + LVF+F + +L L VLV+ + + + +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM-LLN 136
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG- 398
GL Y+H +ILHRD+K++N+L+ + K+ D G+A+ + +S P R
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL----AKNSQPNRYXNR 189
Query: 399 --TFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445
T Y PE + R D++ G ++ E+ T R PI + T+ +
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 112/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+L+H ++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGV-----LVEGMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 113 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 226 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 262
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 263 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 112/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+L+H ++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 99 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 212 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 248
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 249 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 187
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQ 247
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 248 EDLNCIIN 255
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR--VADPDHDHTGFLTEYVA 189
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 250 EDLNCIIN 257
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 22/234 (9%)
Query: 225 DKFSGSNIVGQGGSSYVYR------GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR 278
D + ++G+G S V R GQ +IV V +F + G + + + E +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL-KREASICHM 82
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L H H+V L+ E M +VFEFM +L C + V + A+A
Sbjct: 83 LKHPHIVELL----ETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYM 136
Query: 339 RG-LEYLHEAAAPRILHRDIKSSNILLDENLNA---KITDLGMAKRLKADGLPSCSSSPA 394
R LE L I+HRD+K +LL N+ K+ G+A +L GL +
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-- 194
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV 448
GT + APE DV+ GV+L L++G P + + + E ++
Sbjct: 195 ---GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 193
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 254 EDLNCIIN 261
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR--VADPDHDHTGFLTEYVA 193
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 254 EDLNCIIN 261
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRI-VAVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVVPLV-G 289
+G+G VY+G T+ + VA + + ++ F E + L L H ++V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGM----NWDTRVAIAIGAARGLEYLH 345
+ S +GK+ + +LV E +G L+ L V + +W ++ +GL++LH
Sbjct: 94 WESTVKGKKCI-VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL------KGLQFLH 146
Query: 346 EAAAPRILHRDIKSSNILL-DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFA 404
P I+HRD+K NI + + KI DLG+A +A + +P + A
Sbjct: 147 TRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE-------FXA 198
Query: 405 PEYAMVGRASLMSDVFSFGVVLLELITGRQP---------IHRSITKG 443
PE + DV++FG LE T P I+R +T G
Sbjct: 199 PE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSG 245
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR--VADPDHDHTGFLTEYVA 209
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 270 EDLNCIIN 277
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
GL +LH+ I++RD+K N++LD + KI D GM K DG+ + GT
Sbjct: 132 GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-----TTREFCGT 183
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE D +++GV+L E++ G+ P
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLAR--VADPDHDHTGFLTEYVA 193
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 254 EDLNCIIN 261
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 193
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 254 EDLNCIIN 261
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 189
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 250 EDLNCIIN 257
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 191
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 252 EDLNCIIN 259
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 194
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 254
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 255 EDLNCIIN 262
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 195
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 255
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 256 EDLNCIIN 263
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 186
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 246
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 247 EDLNCIIN 254
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 20/230 (8%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLHHCH 283
K+ +GQG V++ + G+ VA+K+ + + L E+ +L L H +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 284 VVPLVGYC----SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR 339
VV L+ C S + + LVF+F + +L L VLV+ + + + +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM-LLN 136
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG- 398
GL Y+H +ILHRD+K++N+L+ + K+ D G+A+ + +S P R
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL----AKNSQPNRYXNR 189
Query: 399 --TFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445
T Y PE + R D++ G ++ E+ T R PI + T+ +
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 193
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 254 EDLNCIIN 261
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 191
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 252 EDLNCIIN 259
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 187
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 247
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 248 EDLNCIIN 255
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 20/230 (8%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLHHCH 283
K+ +GQG V++ + G+ VA+K+ + + L E+ +L L H +
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 284 VVPLVGYC----SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR 339
VV L+ C S + + LVF+F + +L L VLV+ + + + +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM-LLN 135
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG- 398
GL Y+H +ILHRD+K++N+L+ + K+ D G+A+ + +S P R
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL----AKNSQPNRYXNR 188
Query: 399 --TFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445
T Y PE + R D++ G ++ E+ T R PI + T+ +
Sbjct: 189 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 237
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 197
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 257
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 258 EDLNCIIN 265
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 189
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 250 EDLNCIIN 257
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ K+TD G+AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+DE ++TD G AKR+K C GT
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC--------GTP 189
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLTEYVA 209
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 270 EDLNCIIN 277
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLXEXVA 193
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 254 EDLNCIIN 261
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR--VADPDHDHTGFLXEXVA 194
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 254
Query: 456 QDSGTVIS 463
+D +I+
Sbjct: 255 EDLNCIIN 262
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 28/226 (12%)
Query: 225 DKFSGSNIVGQGGSSYVYR------GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR 278
D + ++G+G S V R GQ +IV V +F + G + + + E +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL-KREASICHM 84
Query: 279 LHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA 338
L H H+V L+ E M +VFEFM +L C + V + A+A
Sbjct: 85 LKHPHIVELL----ETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYM 138
Query: 339 R----GLEYLHEAAAPRILHRDIKSSNILLDENLNA---KITDLGMAKRLKADGLPSCSS 391
R L Y H+ I+HRD+K +LL N+ K+ G+A +L GL +
Sbjct: 139 RQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR 195
Query: 392 SPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
GT + APE DV+ GV+L L++G P +
Sbjct: 196 V-----GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 236
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
V A A GL +L I++RD+K N++LD + KI D GM K DG+
Sbjct: 445 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV---- 497
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ GT Y APE D ++FGV+L E++ G+ P
Sbjct: 498 -TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW--DTRVAIAIGAA-RG 340
+VPL G E + E + G+L G L++ M + R +G A G
Sbjct: 128 IVPLYGAVREGPWVN----IFMELLEGGSL-----GQLIKQMGCLPEDRALYYLGQALEG 178
Query: 341 LEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH RILH D+K+ N+LL + A + D G A L+ DGL + + GT
Sbjct: 179 LEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGT 235
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
+ APE M D++S ++L ++ G P
Sbjct: 236 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW--DTRVAIAIGAA-RG 340
+VPL G E + E + G+L G L++ M + R +G A G
Sbjct: 112 IVPLYGAVREG----PWVNIFMELLEGGSL-----GQLIKQMGCLPEDRALYYLGQALEG 162
Query: 341 LEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH RILH D+K+ N+LL + A + D G A L+ DGL + + GT
Sbjct: 163 LEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGT 219
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
+ APE M D++S ++L ++ G P
Sbjct: 220 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 250 RIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309
R + + R KT +++S L EV +L L H +++ L + F KR LV E
Sbjct: 65 RAIKIIR-KTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF---FEDKRNY-YLVMECYK 119
Query: 310 NGNLRDCLDGVLVEGMNWDTRVAIAI--GAARGLEYLHEAAAPRILHRDIKSSNILL--- 364
G L D ++ M ++ A I G+ YLH+ I+HRD+K N+LL
Sbjct: 120 GGELFD----EIIHRMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESK 172
Query: 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQ---GTFGYFAPEYAMVGRASLMSDVFS 421
+++ KI D GL + + +M+ GT Y APE + + DV+S
Sbjct: 173 EKDALIKIVDF---------GLSAVFENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWS 222
Query: 422 FGVVLLELITGRQP--------IHRSITKGE 444
GV+L L+ G P I R + KG+
Sbjct: 223 IGVILFILLAGYPPFGGQTDQEILRKVEKGK 253
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 98 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 211 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 247
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 248 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 99 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 212 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 248
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 249 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 247 TDGRIVAVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305
+DG+I+ K A+ + ++EV++L L H ++V Y +V
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVM 86
Query: 306 EFMPNGNLRDCLDGVLVEGMNWDT----RVAIAIGAARGLEYLHEAAAPRILHRDIKSSN 361
E+ G+L + E D RV + A + +LHRD+K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 362 ILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFS 421
+ LD N K+ D G+A+ L D +S GT Y +PE + SD++S
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHD-----TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 422 FGVVLLEL 429
G +L EL
Sbjct: 202 LGCLLYEL 209
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 105 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 161 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 218 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 254
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 255 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 304
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 90 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 146 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 203 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 239
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 240 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 289
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ K+TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 21/216 (9%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRLHH 281
D F +G+G VY + + I+A+K FK+Q + E+++ S L H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-ARG 340
+++ + Y + R L+ EF P G L L G + R A + A
Sbjct: 74 PNILRMYNYFHD----RKRIYLMLEFAPRGELYKELQK---HGRFDEQRSATFMEELADA 126
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L Y HE +++HRDIK N+L+ KI D G + + + S M GT
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTL 176
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y PE D++ GV+ E + G P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ K+TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW--DTRVAIAIGAA-RG 340
+VPL G E + E + G+L G L++ M + R +G A G
Sbjct: 126 IVPLYGAVRE----GPWVNIFMELLEGGSL-----GQLIKQMGCLPEDRALYYLGQALEG 176
Query: 341 LEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH RILH D+K+ N+LL + A + D G A L+ DGL + + GT
Sbjct: 177 LEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGT 233
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
+ APE M D++S ++L ++ G P
Sbjct: 234 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 21/216 (9%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRLHH 281
D F +G+G VY + + I+A+K FK+Q + E+++ S L H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-ARG 340
+++ + Y + R L+ EF P G L L G + R A + A
Sbjct: 75 PNILRMYNYFHD----RKRIYLMLEFAPRGELYKELQK---HGRFDEQRSATFMEELADA 127
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L Y HE +++HRDIK N+L+ KI D G + + + S M GT
Sbjct: 128 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTL 177
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y PE D++ GV+ E + G P
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ K+TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 115 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 171 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 228 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 264
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 265 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 314
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 98 CIGVSLQ----SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 211 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 247
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 248 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ K+TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ K+TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ K+TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV++L + H +++ L F K + +L+ E + G L D L E + D
Sbjct: 65 EVNILREIRHPNIITL---HDIFENKTDV-VLILELVSGGELFDFL--AEKESLTEDEAT 118
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + RI H D+K NI LLD+N+ K+ D G+A +++A
Sbjct: 119 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---- 171
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 172 --GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 247 TDGRIVAVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305
+DG+I+ K A+ + ++EV++L L H ++V Y +V
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVM 86
Query: 306 EFMPNGNLRDCLDGVLVEGMNWDT----RVAIAIGAARGLEYLHEAAAPRILHRDIKSSN 361
E+ G+L + E D RV + A + +LHRD+K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 362 ILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFS 421
+ LD N K+ D G+A+ L D +S GT Y +PE + SD++S
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHD-----TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 422 FGVVLLEL 429
G +L EL
Sbjct: 202 LGCLLYEL 209
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 99 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 212 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 248
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 249 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLV--EGMNWDTRVAIAIGAA-RG 340
+VPL G E + E + G+L G LV +G + R +G A G
Sbjct: 147 IVPLYGAVREG----PWVNIFMELLEGGSL-----GQLVKEQGCLPEDRALYYLGQALEG 197
Query: 341 LEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH RILH D+K+ N+LL + +A + D G A L+ DGL + + GT
Sbjct: 198 LEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGT 254
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
+ APE + DV+S ++L ++ G P
Sbjct: 255 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 21/216 (9%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRLHH 281
D F +G+G VY + + I+A+K FK+Q + E+++ S L H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-ARG 340
+++ + Y + R L+ EF P G L L G + R A + A
Sbjct: 74 PNILRMYNYFHD----RKRIYLMLEFAPRGELYKELQK---HGRFDEQRSATFMEELADA 126
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
L Y HE +++HRDIK N+L+ KI D G + + + S M GT
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTL 176
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y PE D++ GV+ E + G P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 113 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 226 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 262
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 263 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 113 CIGVSLQ----SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 226 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 262
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 263 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV++L + H +++ L F K + +L+ E + G L D L E + D
Sbjct: 58 EVNILREIRHPNIITL---HDIFENKTDV-VLILELVSGGELFDFL--AEKESLTEDEAT 111
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + RI H D+K NI LLD+N+ K+ D G+A +++A
Sbjct: 112 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---- 164
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 165 --GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 233 VGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286
+G G VY GQ++ VAVK + FL E ++S+ +H ++V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE-----GMNWDTRVAIAIGAARGL 341
+G + R ++ E M G+L+ L + + +A A G
Sbjct: 125 CIGVSLQ----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK---RLKADGLPSCSSSPAR 395
+YL E +HRDI + N LL AKI D GMA+ R C+ P +
Sbjct: 181 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
+ PE M G + +D +SFGV+L E+ + L P
Sbjct: 238 ------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-----------------LGYMPYP 274
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
S + E + D PK + + +C Q P+ RP + +++
Sbjct: 275 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 324
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 17/136 (12%)
Query: 303 LVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSS 360
+V E+MP G++ L G E I + EYLH + +++RD+K
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH---SLDLIYRDLKPE 170
Query: 361 NILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVF 420
N+L+D+ K+ D G AKR+K C GT Y APE + + D +
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKGRTWXLC--------GTPEYLAPEIILSKGYNKAVDWW 222
Query: 421 SFGVVLLELITGRQPI 436
+ GV++ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 197
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 17/136 (12%)
Query: 303 LVFEFMPNGNLRDCLD--GVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSS 360
+V E+MP G++ L G E I + EYLH + +++RD+K
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH---SLDLIYRDLKPE 170
Query: 361 NILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVF 420
N+L+D+ K+ D G AKR+K C GT Y APE + + D +
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKGRTWXLC--------GTPEYLAPEIILSKGYNKAVDWW 222
Query: 421 SFGVVLLELITGRQPI 436
+ GV++ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV++L + H +++ L F K + +L+ E + G L D L E + D
Sbjct: 79 EVNILREIRHPNIITL---HDIFENKTDV-VLILELVSGGELFDFL--AEKESLTEDEAT 132
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + RI H D+K NI LLD+N+ K+ D G+A +++A
Sbjct: 133 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---- 185
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 186 --GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 106/268 (39%), Gaps = 54/268 (20%)
Query: 249 GRIVAVKRF-KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307
G+ VAVK KTQ ++ EV + L+H ++V L E LV E+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF----EVIETEKTLYLVXEY 94
Query: 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAI-GAARGLEYLHEAAAPRILHRDIKSSNILLDE 366
G + D ++ G + ++Y H+ I+HRD+K+ N+LLD
Sbjct: 95 ASGG---EVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDA 148
Query: 367 NLNAKITDLGMAKRL----KAD---GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDV 419
+ N KI D G + K D G P ++P QG Y PE DV
Sbjct: 149 DXNIKIADFGFSNEFTFGNKLDAFCGAPPY-AAPELFQGK-KYDGPE----------VDV 196
Query: 420 FSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDF--PKE 477
+S GV+L L++G P G + EL + L+G + P
Sbjct: 197 WSLGVILYTLVSGSLPF---------------------DGQNLKELRERVLRGKYRIPFY 235
Query: 478 EMQIMAYLAKECLQLDPDARPTMSEVVQ 505
L K+ L L+P R T+ ++ +
Sbjct: 236 XSTDCENLLKKFLILNPSKRGTLEQIXK 263
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 195
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC--------GTP 223
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 223
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 195
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 140 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC--------GTP 188
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 189 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+LL+ + KI D G+A+ AD +
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLAR--VADPDHDHTGFLTEYVA 191
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGR 433
T Y APE + + S D++S G +L E+++ R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ A
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMAGFVA 184
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 223
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ A
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMAGFVA 184
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ ++TD G+AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
V A A GL +L I++RD+K N++LD + KI D GM K DG+
Sbjct: 124 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV---- 176
Query: 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ GT Y APE D ++FGV+L E++ G+ P
Sbjct: 177 -TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ A
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMAGFVA 180
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 20/180 (11%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A +LHRD+K SN+L++ + KI D G+A+ AD +
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLAR--IADPEHDHTGFLTEXVA 209
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ--PIHRSITKGEESLVLWATPRL 455
T Y APE + + S D++S G +L E+++ R P + + L + +P
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 456 QDSGTVISELPDPRLKG-----------DFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+D +I+ L+ FPK + + + L + L +P+ R T+ E +
Sbjct: 270 EDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDR-MLTFNPNKRITVEEAL 328
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEVDMLS 277
E D + +++G G S V + D R +VA+K + + E+ +L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 278 RLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA--IAI 335
++ H ++V L + L+ + + G L D +VE + R A +
Sbjct: 72 KIKHPNIVAL----DDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDASRLIF 123
Query: 336 GAARGLEYLHEAAAPRILHRDIKSSNIL---LDENLNAKITDLGMAKRLKADGLPSCSSS 392
++YLH+ I+HRD+K N+L LDE+ I+D G++K + S +
Sbjct: 124 QVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC- 179
Query: 393 PARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
GT GY APE S D +S GV+ L+ G P +
Sbjct: 180 -----GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A R AD + +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-RHTADEMTGYVA------- 191
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A R AD + +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-RHTADEMTGYVA------- 191
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ K+ D G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A R AD + +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-RHTADEMTGYVA------- 191
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEV 273
+ E D + +++G G S V + D R +VA+K + + E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA- 332
+L ++ H ++V L + L+ + + G L D +VE + R A
Sbjct: 68 AVLHKIKHPNIVAL----DDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDAS 119
Query: 333 -IAIGAARGLEYLHEAAAPRILHRDIKSSNIL---LDENLNAKITDLGMAKRLKADGLPS 388
+ ++YLH+ I+HRD+K N+L LDE+ I+D G++K + S
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 389 CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ GT GY APE S D +S GV+ L+ G P +
Sbjct: 177 TAC------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ K+ D G AKR+K C GT
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC--------GTP 203
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 127/306 (41%), Gaps = 40/306 (13%)
Query: 227 FSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
F +++G+G V G IVA+K+ + P L E+ +L H +++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 286 PLVGYCSEFRGKRAMRLLVFE--FMPNGNLRDCLDGVLVEGMNWDTRVAIAI-GAARGLE 342
+ F +R F ++ ++ L V+ M D + I R ++
Sbjct: 73 TI------FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ----- 397
LH + ++HRD+K SN+L++ N + K+ D G+A+ + D + +S P Q
Sbjct: 127 VLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMTE 181
Query: 398 --GTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA--- 451
T Y APE + + S DV+S G +L EL R+PI + L+++
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGIIG 240
Query: 452 ------------TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT 499
+PR ++ + P L+ FP+ + + L + L DP R T
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR-MLVFDPAKRIT 299
Query: 500 MSEVVQ 505
E ++
Sbjct: 300 AKEALE 305
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 127/306 (41%), Gaps = 40/306 (13%)
Query: 227 FSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
F +++G+G V G IVA+K+ + P L E+ +L H +++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 286 PLVGYCSEFRGKRAMRLLVFE--FMPNGNLRDCLDGVLVEGMNWDTRVAIAI-GAARGLE 342
+ F +R F ++ ++ L V+ M D + I R ++
Sbjct: 73 TI------FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ----- 397
LH + ++HRD+K SN+L++ N + K+ D G+A+ + D + +S P Q
Sbjct: 127 VLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMTE 181
Query: 398 --GTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA--- 451
T Y APE + + S DV+S G +L EL R+PI + L+++
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGIIG 240
Query: 452 ------------TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT 499
+PR ++ + P L+ FP+ + + L + L DP R T
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR-MLVFDPAKRIT 299
Query: 500 MSEVVQ 505
E ++
Sbjct: 300 AKEALE 305
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLV--EGMNWDTRVAIAIGAA-RG 340
+VPL G E + E + G+L G LV +G + R +G A G
Sbjct: 128 IVPLYGAVRE----GPWVNIFMELLEGGSL-----GQLVKEQGCLPEDRALYYLGQALEG 178
Query: 341 LEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
LEYLH RILH D+K+ N+LL + +A + D G A L+ DGL + + GT
Sbjct: 179 LEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGT 235
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
+ APE + DV+S ++L ++ G P
Sbjct: 236 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 12/188 (6%)
Query: 247 TDGRIVAVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305
+DG+I+ K A+ + ++EV++L L H ++V Y +V
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVM 86
Query: 306 EFMPNGNLRDCLDGVLVEGMNWDT----RVAIAIGAARGLEYLHEAAAPRILHRDIKSSN 361
E+ G+L + E D RV + A + +LHRD+K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 362 ILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFS 421
+ LD N K+ D G+A+ L D GT Y +PE + SD++S
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHD-----EDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 422 FGVVLLEL 429
G +L EL
Sbjct: 202 LGCLLYEL 209
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 22/142 (15%)
Query: 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRV-AIAIGAARGLEYLHEAAAPRILHRDIKSSN 361
+V E M G L LD +L + + A+ + +EYLH A ++HRD+K SN
Sbjct: 93 VVTELMKGGEL---LDKILRQKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSN 146
Query: 362 IL-LDENLNA---KITDLGMAKRLKADG---LPSCSSSPARMQGTFGYFAPEYAMVGRAS 414
IL +DE+ N +I D G AK+L+A+ + C ++ + APE
Sbjct: 147 ILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA--------NFVAPEVLERQGYD 198
Query: 415 LMSDVFSFGVVLLELITGRQPI 436
D++S GV+L ++TG P
Sbjct: 199 AACDIWSLGVLLYTMLTGYTPF 220
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEV 273
+ E D + +++G G S V + D R +VA+K + + E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA- 332
+L ++ H ++V L + L+ + + G L D + VE + R A
Sbjct: 68 AVLHKIKHPNIVAL----DDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDAS 119
Query: 333 -IAIGAARGLEYLHEAAAPRILHRDIKSSNIL---LDENLNAKITDLGMAKRLKADGLPS 388
+ ++YLH+ I+HRD+K N+L LDE+ I+D G++K + S
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 389 CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ GT GY APE S D +S GV+ L+ G P +
Sbjct: 177 TAC------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 127/306 (41%), Gaps = 40/306 (13%)
Query: 227 FSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
F +++G+G V G IVA+K+ + P L E+ +L H +++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 286 PLVGYCSEFRGKRAMRLLVFE--FMPNGNLRDCLDGVLVEGMNWDTRVAIAI-GAARGLE 342
+ F +R F ++ ++ L V+ M D + I R ++
Sbjct: 73 TI------FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ----- 397
LH + ++HRD+K SN+L++ N + K+ D G+A+ + D + +S P Q
Sbjct: 127 VLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMVE 181
Query: 398 --GTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA--- 451
T Y APE + + S DV+S G +L EL R+PI + L+++
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGIIG 240
Query: 452 ------------TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT 499
+PR ++ + P L+ FP+ + + L + L DP R T
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR-MLVFDPAKRIT 299
Query: 500 MSEVVQ 505
E ++
Sbjct: 300 AKEALE 305
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 69/264 (26%)
Query: 290 YCSEFRGKRAMRLLVF--------------EFMPNGNLRDCLDGVLV-EGMNWDTRVAIA 334
+ SE KRA R L+ F P +LR+ D LV M D + +
Sbjct: 61 FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG 120
Query: 335 IGAA------------RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382
+ + +GL+Y+H A ++HRD+K N+ ++E+ KI D G+A+
Sbjct: 121 LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH-- 175
Query: 383 ADGLPSCSSSPARMQG---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHR 438
AD A M G T Y APE + + D++S G ++ E++TG +
Sbjct: 176 AD---------AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-----K 221
Query: 439 SITKGEESL-----VLWAT--------PRLQDSG--TVISELPD-PR--LKGDFPKEEMQ 480
++ KG++ L +L T +L D + I LP PR FP+ Q
Sbjct: 222 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQ 281
Query: 481 IMAYLAKECLQLDPDARPTMSEVV 504
A L ++ L+LD D R T ++ +
Sbjct: 282 -AADLLEKMLELDVDKRLTAAQAL 304
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
+ IAI + L Y+H RDIK NIL+D N + ++ D G +L DG +
Sbjct: 184 MVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDG--TVQ 232
Query: 391 SSPARMQGTFGYFAPEYAMV-----GRASLMSDVFSFGVVLLELITGRQPIH 437
SS A GT Y +PE GR D +S GV + E++ G P +
Sbjct: 233 SSVA--VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+++D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ ++ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 27/229 (11%)
Query: 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGR---IVAVKRFKTQGGPNADSVFLTEV 273
+ E D + +++G G S V + D R +VA+K + + E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKKALEGKEGSMENEI 67
Query: 274 DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA- 332
+L ++ H ++V L + L+ + + G L D +VE + R A
Sbjct: 68 AVLHKIKHPNIVAL----DDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDAS 119
Query: 333 -IAIGAARGLEYLHEAAAPRILHRDIKSSNIL---LDENLNAKITDLGMAKRLKADGLPS 388
+ ++YLH+ I+HRD+K N+L LDE+ I+D G++K + S
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 389 CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ GT GY APE S D +S GV+ L+ G P +
Sbjct: 177 TAC------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG--LPSCSSSPARMQ 397
+EY H +I+HRD+K N+LLDE+LN KI D G++ + DG L + SP
Sbjct: 124 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSCGSP---- 175
Query: 398 GTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQP--------IHRSITKGEESL 447
Y APE + G+ A DV+S GV+L ++ R P + ++I+ G +L
Sbjct: 176 ---NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL 231
Query: 448 VLWATP 453
+ +P
Sbjct: 232 PKFLSP 237
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG--LPSCSSSPARMQ 397
+EY H +I+HRD+K N+LLDE+LN KI D G++ + DG L + SP
Sbjct: 115 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSCGSP---- 166
Query: 398 GTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQP--------IHRSITKGEESL 447
Y APE + G+ A DV+S GV+L ++ R P + ++I+ G +L
Sbjct: 167 ---NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL 222
Query: 448 VLWATP 453
+ +P
Sbjct: 223 PKFLSP 228
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG--LPSCSSSPARMQ 397
+EY H +I+HRD+K N+LLDE+LN KI D G++ + DG L + SP
Sbjct: 125 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSCGSP---- 176
Query: 398 GTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQP--------IHRSITKGEESL 447
Y APE + G+ A DV+S GV+L ++ R P + ++I+ G +L
Sbjct: 177 ---NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL 232
Query: 448 VLWATP 453
+ +P
Sbjct: 233 PKFLSP 238
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 112/264 (42%), Gaps = 69/264 (26%)
Query: 290 YCSEFRGKRAMRLLVF--------------EFMPNGNLRDCLDGVLVE-----------G 324
+ SE KRA R L+ F P +LR+ D LV G
Sbjct: 79 FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG 138
Query: 325 MNWDTR--VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382
M + + +GL+Y+H A ++HRD+K N+ ++E+ KI D G+A+
Sbjct: 139 MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH-- 193
Query: 383 ADGLPSCSSSPARMQG---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHR 438
AD A M G T Y APE + + D++S G ++ E++TG +
Sbjct: 194 AD---------AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-----K 239
Query: 439 SITKGEESL-----VLWAT--------PRLQDSG--TVISELPD-PR--LKGDFPKEEMQ 480
++ KG++ L +L T +L D + I LP PR FP+ Q
Sbjct: 240 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQ 299
Query: 481 IMAYLAKECLQLDPDARPTMSEVV 504
A L ++ L+LD D R T ++ +
Sbjct: 300 -AADLLEKMLELDVDKRLTAAQAL 322
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 99/234 (42%), Gaps = 29/234 (12%)
Query: 223 ATDKFSG---------SNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTE 272
+TD FSG +++G+G + V L + AVK + Q G VF E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF-RE 60
Query: 273 VDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA 332
V+ML + C V EF + LVFE M G++ + N
Sbjct: 61 VEML---YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASV 115
Query: 333 IAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN---AKITDLGMAKRLKADGLPSC 389
+ A L++LH I HRD+K NIL + KI D G+ +K +G S
Sbjct: 116 VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 390 SSSPARMQ--GTFGYFAPEY--AMVGRASLMS---DVFSFGVVLLELITGRQPI 436
S+P + G+ Y APE A AS+ D++S GV+L L++G P
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 44/234 (18%)
Query: 232 IVGQGGS-SYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVG 289
I+G G S + V++G GR VAVKR + + L E+ +L+ H +V+
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRY-- 74
Query: 290 YCSEFRGKRAMRLLVFEF-MPNGNLRDCLDGVLVEGMNWDTR-----VAIAIGAARGLEY 343
YCSE R L + N NL+D ++ V N + +++ A G+ +
Sbjct: 75 YCSE----TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 344 LHEAAAPRILHRDIKSSNILLD-------------ENLNAKITDLGMAKRLKADGLPSCS 390
LH +I+HRD+K NIL+ ENL I+D G+ K+L + G S
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQSSFR 186
Query: 391 SSPARMQGTFGYFAPE-------YAMVGRASLMSDVFSFGVVLLELIT-GRQPI 436
++ GT G+ APE R + D+FS G V +++ G+ P
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG--LPSCSSSPARMQ 397
+EY H +I+HRD+K N+LLDE+LN KI D G++ + DG L + SP
Sbjct: 119 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSCGSP---- 170
Query: 398 GTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQP--------IHRSITKGEESL 447
Y APE + G+ A DV+S GV+L ++ R P + ++I+ G +L
Sbjct: 171 ---NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL 226
Query: 448 VLWATP 453
+ +P
Sbjct: 227 PKFLSP 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD------ 384
+ I I A +E+LH ++HRD+K SNI + K+ D G+ + D
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 385 --GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELI 430
+P+ ++ ++ GT Y +PE S D+FS G++L EL+
Sbjct: 224 LTPMPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH--------TDDEMTGYVA 189
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH--------TDDEMTGYVA 189
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K + GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTWXLXGTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH--------TDDEMTGYVA 195
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH--------TDDEMTGYVA 184
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 19/171 (11%)
Query: 269 FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWD 328
L EV +L +L H +++ L + F KR LV E G L D + +L + +
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEF---FEDKRNY-YLVMEVYRGGELFDEI--ILRQKFSEV 121
Query: 329 TRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAKRLKADG 385
I G YLH+ I+HRD+K N+LL+ + KI D G++ + G
Sbjct: 122 DAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
Query: 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
R+ GT Y APE + + DV+S GV+L L+ G P
Sbjct: 179 -----KMKERL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 28/168 (16%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLD---GVLVEG---M 325
EV +L+ + H ++V Y F ++ +V ++ G+L ++ GVL + +
Sbjct: 73 EVAVLANMKHPNIVQ---YRESFEENGSL-YIVMDYCEGGDLFKRINAQKGVLFQEDQIL 128
Query: 326 NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA-- 383
+W ++ +A L+++H+ +ILHRDIKS NI L ++ ++ D G+A+ L +
Sbjct: 129 DWFVQICLA------LKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179
Query: 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431
+ +C +P Y +PE + SD+++ G VL EL T
Sbjct: 180 ELARACIGTPY-------YLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K + GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTWXLAGTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 224 TDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHC 282
+D F + +G+G +S VYR Q + A+K K + TE+ +L RL H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD---KKIVRTEIGVLLRLSHP 108
Query: 283 HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA-RGL 341
+++ L E LV E + G L D ++ +G + A A+ +
Sbjct: 109 NIIKL----KEIFETPTEISLVLELVTGGEL---FDRIVEKGYYSERDAADAVKQILEAV 161
Query: 342 EYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
YLHE I+HRD+K N+L + KI D G++K ++ L + G
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT------VCG 212
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
T GY APE D++S G++ L+ G +P +
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+ C + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGL-----------CRHTDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 41/289 (14%)
Query: 227 FSGSNIVGQGGS-SYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
F +++G G + VYRG + D R VAVKR + AD EV +L R H
Sbjct: 26 FCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADR----EVQLL-RESDEHPN 79
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345
+ +C+E R + + E + L++ ++ + + + + GL +LH
Sbjct: 80 VIRYFCTE--KDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHLH 135
Query: 346 EAAAPRILHRDIKSSNILL-----DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
I+HRD+K NIL+ + A I+D G+ K+L A G S S + GT
Sbjct: 136 SL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL-AVGRHSFSRRSG-VPGTE 190
Query: 401 GYFAPEYAMVG---RASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQ 456
G+ APE + D+FS G V +I+ G P +S+ + L+
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL-------- 242
Query: 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505
G + P K E I L ++ + +DP RP+ V++
Sbjct: 243 --GACSLDCLHPE------KHEDVIARELIEKMIAMDPQKRPSAKHVLK 283
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 232 IVGQGGS-SYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVG 289
I+G G S + V++G GR VAVKR + + L E+ +L+ H +V+
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRY-- 92
Query: 290 YCSEFRGKRAMRLLVFEF-MPNGNLRDCLDGVLVEGMNWDTR-----VAIAIGAARGLEY 343
YCSE R L + N NL+D ++ V N + +++ A G+ +
Sbjct: 93 YCSE----TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 344 LHEAAAPRILHRDIKSSNILLD-------------ENLNAKITDLGMAKRLKADGLPSCS 390
LH +I+HRD+K NIL+ ENL I+D G+ K+L + G
Sbjct: 149 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQXXFR 204
Query: 391 SSPARMQGTFGYFAPEY---AMVGRASLMSDVFSFGVVLLELIT-GRQPI 436
+ GT G+ APE + R + D+FS G V +++ G+ P
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 186
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 135 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 180
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 63 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 116
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 167
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 19/171 (11%)
Query: 269 FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWD 328
L EV +L +L H +++ L + F KR LV E G L D + +L + +
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEF---FEDKRNY-YLVMEVYRGGELFDEI--ILRQKFSEV 104
Query: 329 TRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMAKRLKADG 385
I G YLH+ I+HRD+K N+LL+ + KI D G++ + G
Sbjct: 105 DAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 161
Query: 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
R+ GT Y APE + + DV+S GV+L L+ G P
Sbjct: 162 -----KMKERL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L ++ H +V+ L + R +L+ E + G L D L E ++ +
Sbjct: 65 EVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEAT 118
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
+ G+ YLH +I H D+K NI LLD+N+ + K+ D G+A ++ DG+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVE 174
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 175 FKN-----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L ++ H +V+ L + R +L+ E + G L D L E ++ +
Sbjct: 65 EVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEAT 118
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
+ G+ YLH +I H D+K NI LLD+N+ + K+ D G+A ++ DG+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVE 174
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 175 FKN-----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L ++ H +V+ L + R +L+ E + G L D L E ++ +
Sbjct: 65 EVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEAT 118
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
+ G+ YLH +I H D+K NI LLD+N+ + K+ D G+A ++ DG+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVE 174
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 175 FKN-----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L ++ H +V+ L + R +L+ E + G L D L E ++ +
Sbjct: 65 EVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEAT 118
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
+ G+ YLH +I H D+K NI LLD+N+ + K+ D G+A ++ DG+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVE 174
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 175 FKN-----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 63 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 116
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 167
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVK-RFKTQ-GGPNADSVFLTEVDMLSRLHH 281
D F +G+G VY + IVA+K FK+Q + E+++ + LHH
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAI--GAAR 339
+++ L Y F +R + L+ E+ P G L L + +D + I A
Sbjct: 83 PNILRLYNY---FYDRRRI-YLILEYAPRGELYKELQ----KSCTFDEQRTATIMEELAD 134
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L Y H +++HRDIK N+LL KI D G + + + S M GT
Sbjct: 135 ALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS-------VHAPSLRRKTMCGT 184
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y PE + D++ GV+ EL+ G P
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMXG 204
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 183
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 232 IVGQGGS-SYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVG 289
I+G G S + V++G GR VAVKR + + L E+ +L+ H +V+
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRY-- 92
Query: 290 YCSEFRGKRAMRLLVFEF-MPNGNLRDCLDGVLVEGMNWDTR-----VAIAIGAARGLEY 343
YCSE R L + N NL+D ++ V N + +++ A G+ +
Sbjct: 93 YCSE----TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 344 LHEAAAPRILHRDIKSSNILLD-------------ENLNAKITDLGMAKRLKADGLPSCS 390
LH +I+HRD+K NIL+ ENL I+D G+ K+L + G
Sbjct: 149 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQXXFR 204
Query: 391 SSPARMQGTFGYFAPEY---AMVGRASLMSDVFSFGVVLLELIT-GRQPI 436
+ GT G+ APE + R + D+FS G V +++ G+ P
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 188
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + +
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA-------- 204
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 191
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 192 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 179
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 183
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 183
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 184
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 187
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L ++ H +V+ L + R +L+ E + G L D L E ++ +
Sbjct: 65 EVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEAT 118
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
+ G+ YLH +I H D+K NI LLD+N+ + K+ D G+A ++ DG+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVE 174
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 175 FKN-----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 187
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 180
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 181
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 192
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 193
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 187
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 50/230 (21%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTDGRIVAVK------RFKTQGGPNADSVFLTEVDMLSRLH 280
++ ++G G V++ +L + VA+K RFK + E+ ++ +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR-----------ELQIMRIVK 90
Query: 281 HCHVVPLVG--YCSEFRGKRAMRLLVFEFMPN---------GNLRDCLDGVLVEGMNWDT 329
H +VV L Y + + LV E++P L+ + +L++ +
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 330 RVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPS 388
R L Y+H I HRDIK N+LLD K+ D G AK L A G P+
Sbjct: 151 --------LRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA-GEPN 198
Query: 389 CSSSPARMQGTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
S +R Y APE + G + + D++S G V+ EL+ G QP+
Sbjct: 199 VSXICSRY-----YRAPE-LIFGATNYTTNIDIWSTGCVMAELMQG-QPL 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 193
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 193
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 189
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 181
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 180
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L ++ H +++ L + R +L+ E + G L D L E ++ +
Sbjct: 65 EVSILRQVLHPNIITL----HDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEAT 118
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
+ G+ YLH +I H D+K NI LLD+N+ + K+ D G+A ++ DG+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVE 174
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 175 FKN-----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARH--------TDDEMTGYVA 186
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 180
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 203
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 201
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 184
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----------TDDEMTG 200
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 41/266 (15%)
Query: 272 EVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR 330
E+++L R H +++ L + GK LV E M G L LD +L + +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDD--GKHVY--LVTELMRGGEL---LDKILRQKFFSERE 122
Query: 331 VAIAIGA-ARGLEYLHEAAAPRILHRDIKSSNIL-LDENLNA---KITDLGMAKRLKADG 385
+ + + +EYLH ++HRD+K SNIL +DE+ N +I D G AK+L+A+
Sbjct: 123 ASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
Query: 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKG-E 444
+P T + APE D++S G++L ++ G P + E
Sbjct: 180 --GLLMTPCY---TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
Query: 445 ESLVLWATPRLQDSG---TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS 501
E L + + SG +SE L + L +DP R T
Sbjct: 235 EILTRIGSGKFTLSGGNWNTVSETAKD----------------LVSKMLHVDPHQRLTAK 278
Query: 502 EVVQILSTIAPDKSRRRNISLNLFQI 527
+V+Q DK + +S Q+
Sbjct: 279 QVLQHPWVTQKDKLPQSQLSHQDLQL 304
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 204
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C GT
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------GTP 202
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y AP + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARH--------TDDEMTGYVA 190
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--------TDDEMTGYVA 207
Query: 399 TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 23/217 (10%)
Query: 227 FSGSNIVGQGG-SSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV 285
F +G G S V + G++ AVK + +S E+ +L ++ H ++V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAA-RGLEYL 344
L + LV + + G L D ++ +G + + I + YL
Sbjct: 84 AL----EDIYESPNHLYLVMQLVSGGEL---FDRIVEKGFYTEKDASTLIRQVLDAVYYL 136
Query: 345 HEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAK-RLKADGLPSCSSSPARMQGTF 400
H I+HRD+K N+L DE I+D G++K K D + + +P
Sbjct: 137 HRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTP------- 186
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
GY APE S D +S GV+ L+ G P +
Sbjct: 187 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 223
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA-ARGLEYLHEAAAPRILHRDIKSSN 361
LV E M G L LD +L + + + + + +EYLH ++HRD+K SN
Sbjct: 98 LVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSN 151
Query: 362 IL-LDENLNA---KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMS 417
IL +DE+ N +I D G AK+L+A+ +P T + APE
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCY---TANFVAPEVLKRQGYDEGC 206
Query: 418 DVFSFGVVLLELITGRQPIHRSITKG-EESLVLWATPRLQDSG---TVISELPDPRLKGD 473
D++S G++L ++ G P + EE L + + SG +SE
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD----- 261
Query: 474 FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRNISLNLFQI 527
L + L +DP R T +V+Q DK + +S Q+
Sbjct: 262 -----------LVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQL 304
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400
EYLH + +++RD+K N+L+D+ ++TD G AKR+K C + A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA------ 204
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
APE + + D ++ GV++ E+ G P
Sbjct: 205 --LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILL----DENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
G+ YLH A +LHRD+K +NIL+ E KI D+G A+ + P P
Sbjct: 140 GIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196
Query: 396 MQGTFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQPIH 437
+ TF Y APE + R + D+++ G + EL+T H
Sbjct: 197 V--TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 271 TEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR 330
E+ +L L H +++ L F K+ LV EF G L + ++ +D
Sbjct: 95 NEISLLKSLDHPNIIKLFDV---FEDKKYF-YLVTEFYEGGELFE----QIINRHKFDEC 146
Query: 331 VAIAIGAA--RGLEYLHEAAAPRILHRDIKSSNILLDEN---LNAKITDLGMAKRLKADG 385
A I G+ YLH+ I+HRDIK NILL+ LN KI D G
Sbjct: 147 DAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDF---------G 194
Query: 386 LPSCSSSPARMQ---GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
L S S +++ GT Y APE + + + DV+S GV++ L+ G P
Sbjct: 195 LSSFFSKDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNIL-LDENLNA---KITDLGMAKRLKADGLP 387
A+ + +EYLH A ++HRD+K SNIL +DE+ N +I D G AK+L+A+
Sbjct: 120 AVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-- 174
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+P T + APE D++S GV+L +TG P
Sbjct: 175 GLLXTPCY---TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 272 EVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRV 331
EV +L + H +V+ L E + +L+ E + G L D L E + +
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEAT 117
Query: 332 AIAIGAARGLEYLHEAAAPRILHRDIKSSNI-LLDENL---NAKITDLGMAKRLKADGLP 387
G+ YLH + +I H D+K NI LLD N+ KI D G+A ++
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI------ 168
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
+ + GT + APE L +D++S GV+ L++G P
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL--HHCHVVPLV 288
+G GGSS V++ +I A+K + N DS + E+ L++L H ++ L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 75
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN---WDTRVAIAIGAARGLEYLH 345
Y ++ M GN+ L+ L + + W+ + LE +H
Sbjct: 76 DY-------EITDQYIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVH 122
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
I+H D+K +N L+ + + K+ D G+A +++ D S GT Y P
Sbjct: 123 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPP 178
Query: 406 EYAMVGRAS------------LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
E A+ +S SDV+S G +L + G+ P + I + +
Sbjct: 179 E-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 229
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ + DP + +FP + + + K CL+ DP R ++ E++
Sbjct: 230 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
L +LH+ I++RD+K N+LLD + K+ D GM K +G+ + A GT
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-----TTATFCGT 187
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
Y APE D ++ GV+L E++ G P
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 98/234 (41%), Gaps = 29/234 (12%)
Query: 223 ATDKFSG---------SNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTE 272
+TD FSG +++G+G + V L + AVK + Q G VF E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF-RE 60
Query: 273 VDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVA 332
V+ML + C V EF + LVFE M G++ + N
Sbjct: 61 VEML---YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASV 115
Query: 333 IAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN---AKITDLGMAKRLKADGLPSC 389
+ A L++LH I HRD+K NIL + KI D + +K +G S
Sbjct: 116 VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 390 SSSPARMQ--GTFGYFAPEY--AMVGRASLMS---DVFSFGVVLLELITGRQPI 436
S+P + G+ Y APE A AS+ D++S GV+L L++G P
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 42/233 (18%)
Query: 232 IVGQGGS-SYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVG 289
I+G G S + V++G GR VAVKR + + L E+ +L+ H +V+
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRY-- 74
Query: 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR-----VAIAIGAARGLEYL 344
YCSE + L + + N NL+D ++ V N + +++ A G+ +L
Sbjct: 75 YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 345 HEAAAPRILHRDIKSSNILLD-------------ENLNAKITDLGMAKRLKADGLPSCSS 391
H +I+HRD+K NIL+ ENL I+D G+ K+L + G
Sbjct: 132 HSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQXXFRX 187
Query: 392 SPARMQGTFGYFAPE-------YAMVGRASLMSDVFSFGVVLLELIT-GRQPI 436
+ GT G+ APE R + D+FS G V +++ G+ P
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 230 SNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288
S ++G+G + V L +G+ AVK + Q G + VF EV+ L + C +
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF-REVETL---YQCQGNKNI 73
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348
EF LVFE + G++ + +RV + AA L++LH
Sbjct: 74 LELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLHTKG 131
Query: 349 APRILHRDIKSSNILLD--ENLN-AKITDLGMAKRLKADGLPSCSSSPARMQ--GTFGYF 403
I HRD+K NIL + E ++ KI D + +K + + ++P G+ Y
Sbjct: 132 ---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 404 APEYAMV--GRASLMS---DVFSFGVVLLELITGRQPI 436
APE V +A+ D++S GVVL +++G P
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 66 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE--R 123
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 124 EASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 178
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 179 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 226
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 74 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE--R 131
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 132 EASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 186
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 187 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 60/289 (20%)
Query: 232 IVGQGGSSYVYRGQ-LTDGRIVAVK---RFKTQG-GPNADSVFLT-EVDMLSRLH----H 281
++G+GG V+ G LTD VA+K R + G P +DSV EV +L ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL--DGVLVEGMN--WDTRVAIAIGA 337
V+ L+ + F + L++ +P +L D + G L EG + + +V AI
Sbjct: 98 PGVIRLLDW---FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI-- 152
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLN-AKITDLGMAKRLKADGLPSCSSSPARM 396
++ H ++HRDIK NIL+D AK+ D G L +
Sbjct: 153 ----QHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY-------TDF 198
Query: 397 QGTFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455
GT Y PE+ + +L + V+S G++L +++ G P R
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER----------------- 241
Query: 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
D + +EL FP L + CL P +RP++ E++
Sbjct: 242 -DQEILEAEL-------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 65 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE--R 122
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 123 EASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 177
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 178 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 64 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 123
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 124 --SEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 176
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 177 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 120 --SEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 172
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 173 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 18/112 (16%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
+ +AI + L Y+H RDIK N+LLD N + ++ D G ++ DG +
Sbjct: 184 MVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDG--TVQ 232
Query: 391 SSPARMQGTFGYFAPEY--AM---VGRASLMSDVFSFGVVLLELITGRQPIH 437
SS A GT Y +PE AM +G+ D +S GV + E++ G P +
Sbjct: 233 SSVA--VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL--HHCHVVPLV 288
+G GGSS V++ +I A+K + N DS + E+ L++L H ++ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 94
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN---WDTRVAIAIGAARGLEYLH 345
Y ++ M GN+ L+ L + + W+ + LE +H
Sbjct: 95 DY-------EITDQYIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVH 141
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
I+H D+K +N L+ + + K+ D G+A +++ D S GT Y P
Sbjct: 142 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPP 197
Query: 406 EYAMVGRAS------------LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
E A+ +S SDV+S G +L + G+ P + I + +
Sbjct: 198 E-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 248
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ + DP + +FP + + + K CL+ DP R ++ E++
Sbjct: 249 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 59 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 118
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 119 --SEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 171
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 172 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 18/112 (16%)
Query: 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390
+ +AI + L Y+H RDIK N+LLD N + ++ D G ++ DG +
Sbjct: 200 MVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDG--TVQ 248
Query: 391 SSPARMQGTFGYFAPEY--AM---VGRASLMSDVFSFGVVLLELITGRQPIH 437
SS A GT Y +PE AM +G+ D +S GV + E++ G P +
Sbjct: 249 SSVA--VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 298
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL--HHCHVVPLV 288
+G GGSS V++ +I A+K + N DS + E+ L++L H ++ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 94
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN---WDTRVAIAIGAARGLEYLH 345
Y ++ M GN+ L+ L + + W+ + LE +H
Sbjct: 95 DY-------EITDQYIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVH 141
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
I+H D+K +N L+ + + K+ D G+A +++ D S GT Y P
Sbjct: 142 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQV---GTVNYMPP 197
Query: 406 EYAMVGRAS------------LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
E A+ +S SDV+S G +L + G+ P + I + +
Sbjct: 198 E-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 248
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ + DP + +FP + + + K CL+ DP R ++ E++
Sbjct: 249 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE--R 161
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 162 EASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 217 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTDGR-IVAVKRFK----TQGGPNADSVFLTEVDMLSRLH 280
K+ +G+G V++ + + IVA+KR + +G P S L E+ +L L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKELK 59
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARG 340
H ++V L + LVFEF + +L+ D + ++ + + +G
Sbjct: 60 HKNIVRL----HDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-LDPEIVKSFLFQLLKG 113
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP-SCSSSPARMQGT 399
L + H +LHRD+K N+L++ N K+ D G+A +A G+P C S+ +
Sbjct: 114 LGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLA---RAFGIPVRCYSA----EVV 163
Query: 400 FGYFAPEYAMVGRASLMS---DVFSFGVVLLELITGRQPI 436
++ P + G A L S D++S G + EL +P+
Sbjct: 164 TLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 119/297 (40%), Gaps = 51/297 (17%)
Query: 233 VGQGGSSYVYRG---------QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
+GQG + +++G QL + ++ + + N F M+S+L H H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLL--KVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-----WDTRVAIAIGAA 338
+V G C F G +LV EF+ G+L D L + N W VA + A
Sbjct: 74 LVLNYGVC--FCGDE--NILVQEFVKFGSL----DTYLKKNKNCINILWKLEVAKQLAWA 125
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+ +L E ++H ++ + NILL + K + K L G+ +Q
Sbjct: 126 --MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGISITVLPKDILQE 179
Query: 399 TFGYFAPE-YAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
+ PE +L +D +SFG L E+ +G G++ L + R
Sbjct: 180 RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSALDSQRKLQ 229
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI-APD 513
+LP P+ +A L C+ +PD RP+ +++ L+++ PD
Sbjct: 230 FYEDRHQLPAPKAAE---------LANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL--HHCHVVPLV 288
+G GGSS V++ +I A+K + N DS + E+ L++L H ++ L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 78
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN---WDTRVAIAIGAARGLEYLH 345
Y ++ M GN+ L+ L + + W+ + LE +H
Sbjct: 79 DY-------EITDQYIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVH 125
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
I+H D+K +N L+ + + K+ D G+A +++ D S GT Y P
Sbjct: 126 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPP 181
Query: 406 EYAMVGRAS------------LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
E A+ +S SDV+S G +L + G+ P + I + +
Sbjct: 182 E-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 232
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ + DP + +FP + + + K CL+ DP R ++ E++
Sbjct: 233 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 58 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 117
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 118 --SEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 170
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 171 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL--HHCHVVPLV 288
+G GGSS V++ +I A+K + N DS + E+ L++L H ++ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 122
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN---WDTRVAIAIGAARGLEYLH 345
Y ++ M GN+ L+ L + + W+ + LE +H
Sbjct: 123 DY-------EITDQYIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVH 169
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
I+H D+K +N L+ + + K+ D G+A +++ D S GT Y P
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPP 225
Query: 406 EYAMVGRAS------------LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
E A+ +S SDV+S G +L + G+ P + I + +
Sbjct: 226 E-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 276
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ + DP + +FP + + + K CL+ DP R ++ E++
Sbjct: 277 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 120 --SEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 172
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 173 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ +I D G+A+ +AD M G
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR--QAD---------EEMTG 179
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+ G+
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 110 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE--R 167
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 168 EASEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 222
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L + +P Y APE + D++S GV++ L+ G P +
Sbjct: 223 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 270
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 38/249 (15%)
Query: 258 KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL 317
K + G + + L E+ +L C P V E + +L+ E+ G +
Sbjct: 64 KRRRGQDCRAEILHEIAVLELAKSC---PRVINLHEVYENTSEIILILEYAAGGEIFSLC 120
Query: 318 DGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL---NAKITD 374
L E ++ + + + G+ YLH+ I+H D+K NILL + KI D
Sbjct: 121 LPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVD 177
Query: 375 LGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQ 434
GM++++ +C + GT Y APE + +D+++ G++ L+T
Sbjct: 178 FGMSRKIGH----ACELR--EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT--- 228
Query: 435 PIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQ--- 491
H S GE++ Q++ IS+ + D+ +E ++ LA + +Q
Sbjct: 229 --HTSPFVGEDN---------QETYLNISQ-----VNVDYSEETFSSVSQLATDFIQSLL 272
Query: 492 -LDPDARPT 499
+P+ RPT
Sbjct: 273 VKNPEKRPT 281
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 30/214 (14%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRLHHCHVVPLVGYC 291
+ + S +++G+ G + VK K + S F E L H +V+P++G C
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNW----DTRVAIAIGAARGLEYLHEA 347
L+ + P G+L + VL EG N+ V A+ ARG +LH
Sbjct: 77 QSPPAPHPT--LITHWXPYGSLYN----VLHEGTNFVVDQSQAVKFALDXARGXAFLH-T 129
Query: 348 AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEY 407
P I + S ++ +DE+ A+I+ + + SP R + APE
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQ---------SPGRXYAP-AWVAPEA 179
Query: 408 AM-----VGRASLMSDVFSFGVVLLELITGRQPI 436
R S +D +SF V+L EL+T P
Sbjct: 180 LQKKPEDTNRRS--ADXWSFAVLLWELVTREVPF 211
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL--HHCHVVPLV 288
+G GGSS V++ +I A+K + N DS + E+ L++L H ++ L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 74
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN---WDTRVAIAIGAARGLEYLH 345
Y ++ M GN+ L+ L + + W+ + LE +H
Sbjct: 75 DY-------EITDQYIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVH 121
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
I+H D+K +N L+ + + K+ D G+A +++ D S GT Y P
Sbjct: 122 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPP 177
Query: 406 EYAMVGRAS------------LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
E A+ +S SDV+S G +L + G+ P + I + +
Sbjct: 178 E-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 228
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ + DP + +FP + + + K CL+ DP R ++ E++
Sbjct: 229 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 58 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 117
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 118 --SEIMKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 170
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
+ L +P Y APE + D++S GV++ L+ G P +
Sbjct: 171 HNSLTEPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 218
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL--HHCHVVPLV 288
+G GGSS V++ +I A+K + N DS + E+ L++L H ++ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 122
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN---WDTRVAIAIGAARGLEYLH 345
Y ++ M GN+ L+ L + + W+ + LE +H
Sbjct: 123 DY-------EITDQYIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVH 169
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
I+H D+K +N L+ + + K+ D G+A +++ D S GT Y P
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPP 225
Query: 406 EYAMVGRAS------------LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
E A+ +S SDV+S G +L + G+ P + I + +
Sbjct: 226 E-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 276
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ + DP + +FP + + + K CL+ DP R ++ E++
Sbjct: 277 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ +I D G+A+ +AD M G
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QAD---------EEMTG 187
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+ G+
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ +I D G+A+ +AD M G
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QAD---------EEMTG 187
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+ G+
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 119/297 (40%), Gaps = 51/297 (17%)
Query: 233 VGQGGSSYVYRG---------QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
+GQG + +++G QL + ++ + + N F M+S+L H H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLL--KVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-----WDTRVAIAIGAA 338
+V G C G +LV EF+ G+L D L + N W VA + AA
Sbjct: 74 LVLNYGVC--VCGDE--NILVQEFVKFGSL----DTYLKKNKNCINILWKLEVAKQLAAA 125
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+ +L E ++H ++ + NILL + K + K L G+ +Q
Sbjct: 126 --MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGISITVLPKDILQE 179
Query: 399 TFGYFAPE-YAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457
+ PE +L +D +SFG L E+ +G G++ L + R
Sbjct: 180 RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSALDSQRKLQ 229
Query: 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI-APD 513
+LP P+ +A L C+ +PD RP+ +++ L+++ PD
Sbjct: 230 FYEDRHQLPAPKAAE---------LANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 17/221 (7%)
Query: 225 DKFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH 283
D+F + GQG V G + + G VA+K K P + L + L+ LHH +
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK--KVIQDPRFRNRELQIMQDLAVLHHPN 80
Query: 284 VVPLVGYCSEF--RGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAI-GAAR 339
+V L Y R +R + L +V E++P+ R C + + + + + R
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDE-NLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
+ LH + + HRDIK N+L++E + K+ D G AK+L P+ + +R
Sbjct: 141 SIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-PNVAYICSRY-- 196
Query: 399 TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQPIHR 438
Y APE + + D++S G + E++ G +PI R
Sbjct: 197 ---YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFR 233
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 34/237 (14%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRF--KTQGGPNADSVFLTEVDMLSR 278
H K+ +G+G V++ G +VAVK+ Q +A F E+ +L+
Sbjct: 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTE 64
Query: 279 LH-HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
L H ++V L+ + LVF++M +L + ++E ++ + +
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVY--LVFDYMET-DLHAVIRANILEPVH---KQYVVYQL 118
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK-----RLKADGLP-SCSS 391
+ ++YLH +LHRD+K SNILL+ + K+ D G+++ R + +P S +
Sbjct: 119 IKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 392 SPARMQ----------GTFGYFAPEYAMVGRASLMS--DVFSFGVVLLELITGRQPI 436
+ T Y APE ++G D++S G +L E++ G+ PI
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPE-ILLGSTKYTKGIDMWSLGCILGEILCGK-PI 230
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI G+A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 42/244 (17%)
Query: 272 EVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL----RDCLDGVLVEGMN 326
EV++ R C H+V +V R L+V E + G L +D D E
Sbjct: 104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREA 163
Query: 327 WDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKA 383
+ + +IG A ++YLH I HRD+K N+L N K+TD G AK +
Sbjct: 164 --SEIXKSIGEA--IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216
Query: 384 -DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHR---- 438
+ L + +P Y APE + D +S GV+ L+ G P +
Sbjct: 217 HNSLTTPCYTPY-------YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269
Query: 439 SITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP 498
+I+ G ++ + E P+P E + + L + L+ +P R
Sbjct: 270 AISPGXKTRIRXGQ----------YEFPNPEW-----SEVSEEVKXLIRNLLKTEPTQRX 314
Query: 499 TMSE 502
T++E
Sbjct: 315 TITE 318
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 339 RGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQG 398
RGL+Y+H A I+HRD+K SN+ ++E+ KI D +A+ + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARH-----------TDDEMTG 181
Query: 399 ---TFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGR 433
T Y APE + + D++S G ++ EL+TGR
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 32/185 (17%)
Query: 256 RFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRD 315
++ GGP+ + +D+ +HH GKR + L++ E M G L
Sbjct: 56 HWQASGGPHIVCI----LDVYENMHH--------------GKRCL-LIIMECMEGGELFS 96
Query: 316 CLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL---DENLNAKI 372
+ + I +++LH + I HRD+K N+L +++ K+
Sbjct: 97 RIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKL 153
Query: 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
TD G AK + L + +P Y APE + D++S GV++ L+ G
Sbjct: 154 TDFGFAKETTQNALQTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
Query: 433 RQPIH 437
P +
Sbjct: 207 FPPFY 211
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 32/185 (17%)
Query: 256 RFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRD 315
++ GGP+ + +D+ +HH GKR + L++ E M G L
Sbjct: 75 HWQASGGPHIVCI----LDVYENMHH--------------GKRCL-LIIMECMEGGELFS 115
Query: 316 CLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL---DENLNAKI 372
+ + I +++LH + I HRD+K N+L +++ K+
Sbjct: 116 RIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKL 172
Query: 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
TD G AK + L + +P Y APE + D++S GV++ L+ G
Sbjct: 173 TDFGFAKETTQNALQTPCYTPY-------YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
Query: 433 RQPIH 437
P +
Sbjct: 226 FPPFY 230
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 55/304 (18%)
Query: 232 IVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVG 289
++ +GG ++VY Q + GR A+KR + + + EV + +L H ++V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 290 YCS----EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGAARGLEYL 344
S E +A LL+ E G L + L + G ++ DT + I R ++++
Sbjct: 94 AASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 345 HEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR--------- 395
H P I+HRD+K N+LL K+ D G A + P S S R
Sbjct: 153 HRQKPP-IIHRDLKVENLLLSNQGTIKLCDFGSATTISH--YPDYSWSAQRRALVEEEIT 209
Query: 396 MQGTFGYFAPE----YAM--VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL 449
T Y PE Y+ +G D+++ G +L L + P
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPIGEK---QDIWALGCILYLLCFRQHPFEDG---------- 256
Query: 450 WATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAY--LAKECLQLDPDARPTMSEVVQIL 507
A R+ + K P + Q + L + LQ++P+ R +++EVV L
Sbjct: 257 -AKLRIVNG------------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303
Query: 508 STIA 511
IA
Sbjct: 304 QEIA 307
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 225 DKFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFKTQGGPNAD-SVFLTEVDMLSRLHHC 282
D++ +++G G +V + R+VA+K+ D L E+ +L+RL+H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 283 HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL-DGVLVEGMNWDTRVAIAIGAARGL 341
HVV ++ ++ L V + + + + V + ++ T + G+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT---LLYNLLVGV 169
Query: 342 EYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL--------------KADGL- 386
+Y+H A ILHRD+K +N L++++ + K+ D G+A+ + + D +
Sbjct: 170 KYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 387 ----PSCSSSPARMQG---TFGYFAPEYAMVGRASLMS-DVFSFGVVLLELIT 431
P + ++ G T Y APE ++ + DV+S G + EL+
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAKRLKADGLPSCSSSPARM 396
+ ++H+ ++HRD+K N+L ++NL KI D G A+ D P +P
Sbjct: 118 AVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCF- 171
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH---RSIT 441
T Y APE D++S GV+L +++G+ P RS+T
Sbjct: 172 --TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 226 KFSGSNIVGQGGSSYVYRGQLTDGR-IVAVKRFK----TQGGPNADSVFLTEVDMLSRLH 280
K+ +G+G V++ + + IVA+KR + +G P S L E+ +L L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKELK 59
Query: 281 HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARG 340
H ++V L + LVFEF + +L+ D + ++ + + +G
Sbjct: 60 HKNIVRL----HDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-LDPEIVKSFLFQLLKG 113
Query: 341 LEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP-SCSSSPARMQGT 399
L + H +LHRD+K N+L++ N K+ + G+A +A G+P C S+ T
Sbjct: 114 LGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA---RAFGIPVRCYSAEVV---T 164
Query: 400 FGYFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQPI 436
Y P+ + S D++S G + EL +P+
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 54/291 (18%)
Query: 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL--HHCHVVPLV 288
+G GGSS V++ +I A+K + N DS + E+ L++L H ++ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 122
Query: 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN---WDTRVAIAIGAARGLEYLH 345
Y ++ M GN+ L+ L + + W+ + LE +H
Sbjct: 123 DY-------EITDQYIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVH 169
Query: 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405
I+H D+K +N L+ + + K+ D G+A +++ D S G Y P
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV---GAVNYMPP 225
Query: 406 EYAMVGRAS------------LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453
E A+ +S SDV+S G +L + G+ P + I + +
Sbjct: 226 E-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 276
Query: 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504
+ + DP + +FP + + + K CL+ DP R ++ E++
Sbjct: 277 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAI------GAARGLEYLHEAAAPRILHRD 356
+++E+M N ++ + V N+ + I + Y+H I HRD
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK--NICHRD 177
Query: 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLM 416
+K SNIL+D+N K++D G ++ + + +GT+ + PE+ +S
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS-------RGTYEFMPPEF-FSNESSYN 229
Query: 417 S---DVFSFGVVLLELITGRQPIHRSIT 441
D++S G+ L + P I+
Sbjct: 230 GAKVDIWSLGICLYVMFYNVVPFSLKIS 257
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S GV++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S GV++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 19/218 (8%)
Query: 224 TDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HH 281
TD++ +G+G S V R +L G A K T+ D L + RL H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 282 CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGL 341
++V L SE LVF+ + G L + ++ + + I + L
Sbjct: 63 SNIVRLHDSISE----EGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCI--QQIL 113
Query: 342 EYLHEAAAPRILHRDIKSSNILLDENLNA---KITDLGMAKRLKADGLPSCSSSPARMQG 398
E + ++HRD+K N+LL K+ D G+A ++ D + G
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD-----QQAWFGFAG 168
Query: 399 TFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
T GY +PE D+++ GV+L L+ G P
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 43/254 (16%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTDGRIVAVKR-FKTQGGPNADSVF---------LTEVDML 276
++ + G V G ++G VA+KR F T ++ L E+ +L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAI 335
+ HH +++ L F +L LV E M R L V+ D R+ I+
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-----RTDLAQVI-----HDQRIVISP 133
Query: 336 GAAR--------GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387
+ GL LHEA ++HRD+ NILL +N + I D +A+ AD
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTAD--- 187
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSIT---KG 443
++ Y APE M + + + D++S G V+ E+ R+ + R T +
Sbjct: 188 ---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGSTFYNQL 243
Query: 444 EESLVLWATPRLQD 457
+ + + TP+++D
Sbjct: 244 NKIVEVVGTPKIED 257
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 27/222 (12%)
Query: 224 TDKFSGSNIVGQGGSSYVYR------GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLS 277
TD++ +G+G S V R GQ +I+ K+ + + E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER----EARICR 58
Query: 278 RLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
L H ++V L SE LVF+ + G L + ++ + + I
Sbjct: 59 LLKHPNIVRLHDSISE----EGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCI-- 109
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ LE ++ I+HRD+K N+LL + K+ D G+A ++ D +
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-----QQAWF 164
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT GY +PE D+++ GV+L L+ G P
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 43/254 (16%)
Query: 227 FSGSNIVGQGGSSYVYRGQLTDGRIVAVKR-FKTQGGPNADSVF---------LTEVDML 276
++ + G V G ++G VA+KR F T ++ L E+ +L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 277 SRLHHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAI 335
+ HH +++ L F +L LV E M R L V+ D R+ I+
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-----RTDLAQVI-----HDQRIVISP 133
Query: 336 GAAR--------GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387
+ GL LHEA ++HRD+ NILL +N + I D +A+ AD
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTAD--- 187
Query: 388 SCSSSPARMQGTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSIT---KG 443
++ Y APE M + + + D++S G V+ E+ R+ + R T +
Sbjct: 188 ---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGSTFYNQL 243
Query: 444 EESLVLWATPRLQD 457
+ + + TP+++D
Sbjct: 244 NKIVEVVGTPKIED 257
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 27/222 (12%)
Query: 224 TDKFSGSNIVGQGGSSYVYR------GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLS 277
TD++ +G+G S V R GQ +I+ K+ + + E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER----EARICR 58
Query: 278 RLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGA 337
L H ++V L SE LVF+ + G L + ++ + + I
Sbjct: 59 LLKHPNIVRLHDSISE----EGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCI-- 109
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILL---DENLNAKITDLGMAKRLKADGLPSCSSSPA 394
+ LE ++ I+HRD+K N+LL + K+ D G+A ++ D +
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-----QQAWF 164
Query: 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT GY +PE D+++ GV+L L+ G P
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 22/221 (9%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
+H D + +G G V+R + G A K T + ++V E+ +S L
Sbjct: 47 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV-RKEIQTMSVL 105
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE--GMNWDTRVAIAIGA 337
H LV F M ++++EFM G L + V E M+ D V
Sbjct: 106 RHP---TLVNLHDAFEDDNEM-VMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQV 158
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILL--DENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+GL ++HE +H D+K NI+ + K+ D G+ L S
Sbjct: 159 CKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP------KQSVKV 209
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT + APE A +D++S GV+ L++G P
Sbjct: 210 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 22/221 (9%)
Query: 221 EHATDKFSGSNIVGQGGSSYVYR-GQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
+H D + +G G V+R + G A K T + ++V E+ +S L
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV-RKEIQTMSVL 211
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVE--GMNWDTRVAIAIGA 337
H +V L F M ++++EFM G L + V E M+ D V
Sbjct: 212 RHPTLVNL---HDAFEDDNEM-VMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQV 264
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILL--DENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
+GL ++HE +H D+K NI+ + K+ D G+ L S
Sbjct: 265 CKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP------KQSVKV 315
Query: 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT + APE A +D++S GV+ L++G P
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 25/233 (10%)
Query: 222 HATDKFSGSNIVGQGGSSYVYRGQLTDG-RIVAVKRFKTQGGPNAD-SVFLTEVDMLSRL 279
H D + +++G+G YVY + + VA+K+ D L E+ +L+RL
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR 339
+++ L + L + + + +L+ + + + I
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEEHIKTILYNLLL 140
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK------------RLKADGLP 387
G ++HE+ I+HRD+K +N LL+++ + K+ D G+A+ L+ + P
Sbjct: 141 GENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197
Query: 388 SCSSSPARMQGTFG-----YFAPEYAMVGRASLMS-DVFSFGVVLLELITGRQ 434
+ + Q T Y APE ++ S D++S G + EL+ Q
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLT-EVDMLSRLHHCH 283
+K+ + +G+G V+R T + + +F G D V + E+ +L+ H +
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRN 62
Query: 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEY 343
++ L F + +++FEF+ ++ + ++ E +N V+ L++
Sbjct: 63 ILHL---HESFESMEEL-VMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEALQF 117
Query: 344 LHEAAAPRILHRDIKSSNILLDENLNA--KITDLGMAKRLK-ADGLPSCSSSPARMQGTF 400
LH + I H DI+ NI+ ++ KI + G A++LK D ++P
Sbjct: 118 LH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE------ 168
Query: 401 GYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435
Y+APE S +D++S G ++ L++G P
Sbjct: 169 -YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 354 HRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRA 413
HRD+K NIL+ + A + D G+A + L ++ GT Y APE A
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT----VGTLYYXAPERFSESHA 212
Query: 414 SLMSDVFSFGVVLLELITGRQP 435
+ +D+++ VL E +TG P
Sbjct: 213 TYRADIYALTCVLYECLTGSPP 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSS---SPARM 396
G+++LH A I+HRD+K SNI++ + KI D G+A+ +C++ +P +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-------ACTNFMMTPYVV 187
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
T Y APE + + D++S G ++ EL+ G
Sbjct: 188 --TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ 397
A L YLH I++RD+K NILLD + +TD G+ K +S+ +
Sbjct: 149 ASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI-----EHNSTTSTFC 200
Query: 398 GTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437
GT Y APE D + G VL E++ G P +
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ + + +P + T
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM----MTPYVV--T 186
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459
Y APE + D++S G ++ EL+ G S++ T +
Sbjct: 187 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKG-------------SVIFQGTDHIDQWN 233
Query: 460 TVISELPDP 468
VI +L P
Sbjct: 234 KVIEQLGTP 242
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKADGLPSCSSSPARM 396
L Y H + ++H+D+K NIL + + KI D G+A+ K+D S++ A
Sbjct: 136 ALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD---EHSTNAA-- 187
Query: 397 QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436
GT Y APE + D++S GVV+ L+TG P
Sbjct: 188 -GTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 225 DKFSGSNIVGQGGSSYVYRGQLTDG-RIVAVKRFKTQGGPNAD-SVFLTEVDMLSRLHHC 282
D + +++G+G YVY + + VA+K+ D L E+ +L+RL
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 283 HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLE 342
+++ L + L + + + +L+ + + I G +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEQHVKTILYNLLLGEK 145
Query: 343 YLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384
++HE+ I+HRD+K +N LL+++ + KI D G+A+ + +D
Sbjct: 146 FIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 183
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------GGQVF------- 222
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 223 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----SFMMTPEVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----SFMMTPYVV--T 189
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 121/310 (39%), Gaps = 67/310 (21%)
Query: 232 IVGQGGSSYVYRGQLTDG---RIVAVKRFKTQGGPNADSV--FLTEVDMLSRLHHCHVVP 286
++G+G VY G+ R++ ++R N D + F EV + H +VV
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIER------DNEDQLKAFKREVMAYRQTRHENVVL 93
Query: 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCL--DGVLVEGMNWDTRVAIAIGAARGLEYL 344
+G C L + + G + D +V +N ++A I +G+ YL
Sbjct: 94 FMGACMS-----PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI--VKGMGYL 146
Query: 345 HEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQ---GTFG 401
H A ILH+D+KS N+ D N ITD G+ G+ +++ G
Sbjct: 147 H---AKGILHKDLKSKNVFYD-NGKVVITDFGL---FSISGVLQAGRREDKLRIQNGWLC 199
Query: 402 YFAPEYAMVGRA---------SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA- 451
+ APE S SDVF+ G + EL P T+ E+ ++W
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK---TQPAEA-IIWQM 255
Query: 452 ----TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507
P L G KE I+ + C + + RPT ++++ +L
Sbjct: 256 GTGMKPNLSQIG--------------MGKEISDILLF----CWAFEQEERPTFTKLMDML 297
Query: 508 STIAPDKSRR 517
+ P ++RR
Sbjct: 298 EKL-PKRNRR 306
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 183
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 222
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 223 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 186
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 225
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 226 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 215
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------GGQVF------- 254
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 255 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 216
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------GGQVF------- 255
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 256 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 215
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------GGQVF------- 254
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 255 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 216
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------GGQVF------- 255
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 256 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 216
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------GGQVF------- 255
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 256 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 215
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------GGQVF------- 254
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 255 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 216
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------GGQVF------- 255
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 256 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 202
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 241
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 242 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 215
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 254
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 255 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 187
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 226
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 227 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 202
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 241
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 242 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 203
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P +E ++ G V
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEII---------RGQVF------- 242
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 243 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 39/256 (15%)
Query: 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPL---- 287
+G GG+ V+ D + VA+K+ P + L E+ ++ RL H ++V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI-VLTDPQSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 288 ----------VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAI-G 336
VG +E +V E+M L VL +G + + +
Sbjct: 78 GPSGSQLTDDVGSLTELNSVY----IVQEYMETD-----LANVLEQGPLLEEHARLFMYQ 128
Query: 337 AARGLEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKRLKADGLPSCSSSPAR 395
RGL+Y+H A +LHRD+K +N+ ++ E+L KI D G+A+ + P S
Sbjct: 129 LLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMD----PHYSHKGHL 181
Query: 396 MQG--TFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWAT 452
+G T Y +P + + D+++ G + E++TG+ + + L+L +
Sbjct: 182 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241
Query: 453 PRL--QDSGTVISELP 466
P + +D ++S +P
Sbjct: 242 PVVHEEDRQELLSVIP 257
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 183
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 222
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 223 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 230
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 269
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 270 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 230
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 269
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 270 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 203
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P +E ++ G V
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEII---------RGQVF------- 242
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 243 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 187
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 226
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 227 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 203
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 242
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 243 ----FRQRVSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 188
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P +E ++ G V
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEII---------RGQVF------- 227
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 188
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 227
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 222
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 261
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 262 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 235
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 236 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 274
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 275 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 188
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 227
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 42/279 (15%)
Query: 216 SYSALEHAT--DKFSGSNIVGQGGSSYVYRG-QLTDGRIVAVKRFK----TQGGPNADSV 268
S SA AT D++ +G+G VY+ VA+KR + +G P
Sbjct: 23 SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA-- 80
Query: 269 FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL-LVFEFMPNGNLRDCLDGVLVEGMNW 327
+ EV +L L H +++ L RL L+FE+ N +L+ +D + +
Sbjct: 81 -IREVSLLKELQHRNIIELKSVIHH-----NHRLHLIFEYAEN-DLKKYMD----KNPDV 129
Query: 328 DTRV--AIAIGAARGLEYLHEAAAPRILHRDIKSSNILL-----DENLNAKITDLGMAKR 380
RV + G+ + H + R LHRD+K N+LL E KI D G+A
Sbjct: 130 SMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA-- 184
Query: 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRS 439
+A G+P + + T Y PE + R S D++S + E++ + P+
Sbjct: 185 -RAFGIPIRQFTHEII--TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPG 240
Query: 440 ITKGEESLVLWATPRLQDSGTV--ISELPDPRLKGDFPK 476
++ ++ ++ L D T ++ LPD K FPK
Sbjct: 241 DSEIDQLFKIFEVLGLPDDTTWPGVTALPD--WKQSFPK 277
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 86/221 (38%), Gaps = 27/221 (12%)
Query: 222 HATDKFSGSNIVGQG--GSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL 279
H +D++ +G G G + + R +LT +VAVK + G D E+ L
Sbjct: 17 HDSDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYI--ERGAAIDENVQREIINHRSL 73
Query: 280 HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNL--RDCLDGVLVEGMNWDTRVAIAIGA 337
H ++V E ++ E+ G L R C G E D
Sbjct: 74 RHPNIVRF----KEVILTPTHLAIIMEYASGGELYERICNAGRFSE----DEARFFFQQL 125
Query: 338 ARGLEYLHEAAAPRILHRDIKSSNILLDEN--LNAKITDLGMAKRLKADGLPSCSSSPAR 395
G+ Y H +I HRD+K N LLD + KI D G +K S P
Sbjct: 126 LSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS------SVLHSQPKS 176
Query: 396 MQGTFGYFAPEYAMVGRAS-LMSDVFSFGVVLLELITGRQP 435
GT Y APE + ++DV+S GV L ++ G P
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 230
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 269
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 270 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 352 ILHRDIKSSNILLDENLNA-KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV 410
+LHRDIK NIL+D N K+ D G LK + GT Y PE+
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLK-------DTVYTDFDGTRVYSPPEWIRY 210
Query: 411 GRASLMS-DVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469
R S V+S G++L +++ G P + +E ++ G V
Sbjct: 211 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII---------RGQVF------- 249
Query: 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503
F + +L + CL L P RPT E+
Sbjct: 250 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S T
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFMMVPFVVT 190
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432
Y APE + D++S G ++ E+I G
Sbjct: 191 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----SFMMTPYVV--T 226
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
Y APE + D++S G ++ E++ H+ + G + + W
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-----HKILFPGRDYIDQW 272
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----SFMMTPYVV--T 226
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
Y APE + D++S G ++ E++ H+ + G + + W
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-----HKILFPGRDYIDQW 272
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----SFMMTPYVV--T 181
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
Y APE + D++S G ++ E++ H+ + G + + W
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-----HKILFPGRDYIDQW 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
Y APE + D++S G ++ E++ H+ + G + + W
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-----HKILFPGRDYIDQW 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----SFMMTPYVV--T 188
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
Y APE + D++S G ++ E++ H+ + G + + W
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-----HKILFPGRDYIDQW 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 340 GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGT 399
G+++LH A I+HRD+K SNI++ + KI D G+A+ S +P + T
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----SFMMTPYVV--T 187
Query: 400 FGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450
Y APE + D++S G ++ E++ H+ + G + + W
Sbjct: 188 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-----HKILFPGRDYIDQW 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,130,443
Number of Sequences: 62578
Number of extensions: 670240
Number of successful extensions: 3733
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 1525
Number of HSP's gapped (non-prelim): 1254
length of query: 632
length of database: 14,973,337
effective HSP length: 105
effective length of query: 527
effective length of database: 8,402,647
effective search space: 4428194969
effective search space used: 4428194969
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)