BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>006751
MSPASKSKSKPSGKASKEQQKAPIKPSGSANAGNGVPASAYNPISGTFHTLDTSSVATSP
PYHDNGRFRNIDDTDEHSSRPHGTVSEYDSVSNNGSCSGESEDPKEKFANSSRQDPIPGS
DNDRREKIRLKNEKKHQRQREKRAQELHERCCGYLMSRKLEALSQQLVAMGFSSERATLA
LMLNEGRVEESVNWLFEVSEEEARNTDPKLESSGSLKIDISEELARISEIELRYKCSKQE
VERAVVASEGDLDKAEDTIKVQKQELPATPPRPDDTADTKSMVRPQEKLLAPITIQQRRN
ERDFNYTKAAATVPITFTETGSRNLLSPVPNQSKLLADKRWAASGSSASASLTATAHMPL
VSPSKVEVRQAVAGNEGKTIQQVREPVIVMQRPQSMNAKQIPASSAASSPQVTAGWYAKN
VPAVENVRPNAKILQGTGTRGTENQSSELFYRQAPYKEIPYMHNPVESISAGLGSSWSSM
GSSSPSLTAPSKSRGSWSTMGMSSPSLAVPSSLGLFASWGSAGTLGSSSHVDWNTGGLMP
ECDYTSIDWTLDTSTSLSSSPKPNGLWFGISSLLRNSPGMRMGGANGTCMSGLQDNGAVT
EASSAGGLREWTSPFAEKDIFSVPRQFVTSPP

High Scoring Gene Products

Symbol, full name Information P value
AT2G26920 protein from Arabidopsis thaliana 1.3e-93
AT5G12120 protein from Arabidopsis thaliana 2.4e-85

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  006751
        (632 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2039513 - symbol:AT2G26920 "AT2G26920" species...   932  1.3e-93   1
TAIR|locus:2177043 - symbol:AT5G12120 species:3702 "Arabi...   713  2.4e-85   2


>TAIR|locus:2039513 [details] [associations]
            symbol:AT2G26920 "AT2G26920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0000956 "nuclear-transcribed mRNA catabolic
            process" evidence=RCA] InterPro:IPR000449 InterPro:IPR009060
            Pfam:PF00627 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005168
            GO:GO:0003746 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
            SUPFAM:SSF46934 UniGene:At.48522 UniGene:At.70122 EMBL:BT010480
            EMBL:AK227218 IPI:IPI00549035 PIR:T02643 RefSeq:NP_180260.1
            ProteinModelPortal:O81015 SMR:O81015 PaxDb:O81015 PRIDE:O81015
            EnsemblPlants:AT2G26920.1 GeneID:817233 KEGG:ath:AT2G26920
            TAIR:At2g26920 eggNOG:NOG272273 HOGENOM:HOG000241433
            InParanoid:O81015 OMA:ERCKGYL PhylomeDB:O81015
            ProtClustDB:CLSN2683429 ArrayExpress:O81015 Genevestigator:O81015
            Uniprot:O81015
        Length = 646

 Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
 Identities = 250/657 (38%), Positives = 343/657 (52%)

Query:    18 EQQKAPIKPSGSANAGNGVPASAYNPISGTFHTLDTSSVATSPPYHDNGRFRNIDDTDEH 77
             E QKA  KPS S N  + + AS YNP+ GTF  LD+ S+A+  P   + RFR+ID+ D +
Sbjct:    22 EAQKASPKPSLSVNGNSSLAASGYNPLLGTFQALDSVSIASISPLQYS-RFRSIDEADVN 80

Query:    78 SSRPHGTVSEYDSVSNNGSCSGESEDPKEKFANSS-RQDPIPGSDNDRREKIRLKNEKKH 136
                      E DSVSNNGSCSGESED KEK  N   +Q+ IPG+DND+REK+R KNE+KH
Sbjct:    81 GI-------ESDSVSNNGSCSGESEDHKEKTTNLPLKQEVIPGADNDKREKVRQKNERKH 133

Query:   137 QRQREKRAQELHERCCGYLMSRKLEALSQQLVAMGFSSERATLALMLNEGRVEESVNWLF 196
             QRQ+E+RAQEL+E+C  YL+SRKLEA +QQ+VAMG S E AT ALM+N+G+VEESV+WLF
Sbjct:   134 QRQKERRAQELNEKCSTYLISRKLEARTQQIVAMGISQEHATTALMMNDGKVEESVHWLF 193

Query:   197 EVSEEEARNTDPKLESSGSLKIDISEELARISEIELRYKCSKQEVERAVVASEGDLDKAE 256
             +  EEE       ++S G+LKIDI+EELARI+++EL+ KC++QE+ERAVV +EGDLD+AE
Sbjct:   194 DRLEEEIEKQS--IQSPGNLKIDITEELARITKMELQLKCTRQEIERAVVQAEGDLDRAE 251

Query:   257 DTIK----------VQKQE----LXXXXXXXXXXXXXKSMVRPQEKLLAPITIQQRRNER 302
             + +K          V+++E    L             ++    + ++ +P  +   R+++
Sbjct:   252 EVLKGTKYEEFSVPVKQEECGDPLTPSNGKLIVGIGYQNSDVERSEIPSP-GLHPTRDDK 310

Query:   303 DFNYTKAAAT---VPITFTETGSRNLLS---PVPNQSKLLADKRWXXXXXXXXXXXXXXX 356
             +FNYTK+ +T   V     +   R  L    P P QS  LADKRW               
Sbjct:   311 NFNYTKSPSTTESVNKMLAQPMKRPELKLDWPKPQQSAALADKRWPPTTGQVPSASYSLP 370

Query:   357 HMPLVSPS---KVEVRQAVAGNEGKTIQQV------REPVIVM-QRPQSMNAKQIPXXXX 406
               P  SP    +VE R   +GNE K  QQ       RE V+VM QRPQ +    +P    
Sbjct:   371 SSPSPSPQPAVRVEARYLASGNEFKNFQQQQQQPANRESVMVMRQRPQVVITNPVPTSSM 430

Query:   407 XXXPQVTAGWYAKNVPAVENVRPNAKILQGTGTRGTENQSSELFYRQAPYKEIPYMHNPV 466
                P     W+     ++E ++ N   +Q        + S         Y+++ Y +   
Sbjct:   431 SAPP---TSWHP--AASIEIMKSNG-FMQTHNIPSARSPSPNHLNPNQVYQQLQYQNQK- 483

Query:   467 EXXXXXXXXXXXXXXXXXXXXXXXXXXRGSWSTMGMSSPSLAVPSSLGLFASWGSAGTLG 526
                                         G W+    SSP ++  SSLGLF++ GSAGT G
Sbjct:   484 ---------RFTNNNQVDPHGSMARGNGGQWTRNTASSPPISAASSLGLFSAVGSAGTSG 534

Query:   527 SSSHVDWNTGGLMPECDYXXXXXXXXXXXXXXXXPKPNGLWFGISSL------------L 574
             +SS +DW +GG +   DY                 + NG W G+ S             L
Sbjct:   535 ASSPIDWISGGSV---DYTNIDWSLDQSLSQNS--RVNGNWSGLKSSSQIYDENMNRYSL 589

Query:   575 RNSPGMRMGGANGTCMSGLQDNGAVTEASSAGGLREWTSPFAEKDIFSVPRQFVTSP 631
               S G R+  +NG  M      G + E   A    +WTSPF  KDIFS+ RQ+V SP
Sbjct:   590 NGSMGGRLNNSNGVSMEN-SGAGVIVETQQAATSPDWTSPFEGKDIFSLSRQYV-SP 644


>TAIR|locus:2177043 [details] [associations]
            symbol:AT5G12120 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR009060 GO:GO:0005886 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0003746 InterPro:IPR015940
            PROSITE:PS50030 SUPFAM:SSF46934 EMBL:AB007727 UniGene:At.24306
            HOGENOM:HOG000241433 ProtClustDB:CLSN2683429 EMBL:AY056794
            EMBL:AY092977 EMBL:BT009666 IPI:IPI00537867 RefSeq:NP_196773.1
            UniGene:At.69518 ProteinModelPortal:Q9FMQ0 SMR:Q9FMQ0 PaxDb:Q9FMQ0
            PRIDE:Q9FMQ0 EnsemblPlants:AT5G12120.1 GeneID:831085
            KEGG:ath:AT5G12120 TAIR:At5g12120 eggNOG:NOG266682
            InParanoid:Q9FMQ0 OMA:STEETHY PhylomeDB:Q9FMQ0 ArrayExpress:Q9FMQ0
            Genevestigator:Q9FMQ0 Uniprot:Q9FMQ0
        Length = 619

 Score = 713 (256.0 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
 Identities = 143/252 (56%), Positives = 191/252 (75%)

Query:    18 EQQKAPIKPSGSANAGNGVPASAYNPISGTFHTLDTSSVATSPPYHDNGRFRNIDDTDEH 77
             + QK P K SGS   G+ V    YNP+ GTF T+++ S   S   H+NGRFR+ID++D  
Sbjct:    17 DSQKTPSKASGSMG-GSSVVVGGYNPLLGTFQTIESLSATGSSSLHNNGRFRHIDESDS- 74

Query:    78 SSRPHGTVSEYDSVSNNGSCSGESEDPKEKFANSS---RQDPIPGSDNDRREKIRLKNEK 134
                   T ++ DSVSNNGS SGESED KEK  ++S   +Q+ IPG+DND+R+K+RLKNE+
Sbjct:    75 ------TGADCDSVSNNGSWSGESEDHKEKVPSTSIAAKQEIIPGADNDKRDKMRLKNER 128

Query:   135 KHQRQREKRAQELHERCCGYLMSRKLEALSQQLVAMGFSSERATLALMLNEGRVEESVNW 194
             KHQRQ+EKRAQELHERCC YLMSRKLE  +Q +++MG   ERAT ALMLNEG++EES+NW
Sbjct:   129 KHQRQKEKRAQELHERCCQYLMSRKLEVHAQLIISMGIPHERATYALMLNEGKIEESINW 188

Query:   195 LFEVSEEEARNTDPKLE-SSGSLKIDISEELARISEIELRYKCSKQEVERAVVASEGDLD 253
             LF+  +  A+  D KL+ +SG+LK+DIS+EL RI E+E +YKC+KQ+VERAVV +EGD++
Sbjct:   189 LFD--DGGAKVADKKLDPTSGNLKLDISQELGRILELETKYKCTKQDVERAVVTAEGDIE 246

Query:   254 KAEDTIKVQKQE 265
             KAE+ ++ QKQ+
Sbjct:   247 KAEEALRRQKQD 258

 Score = 160 (61.4 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
 Identities = 50/139 (35%), Positives = 65/139 (46%)

Query:   501 GMSSPSLAVPS-SLGLFASWGS-AGTLGSSSHVDWNTGGLMPECDYXXXXXXXXXXXXXX 558
             G S+P    P+ SLGLF+ +GS AG+  SSS +DWNT G +   DY              
Sbjct:   486 GSSAPPAVAPAASLGLFSGFGSLAGS--SSSGLDWNTDGSLGHLDYNNIDWSLDKGLACV 543

Query:   559 XXPKPNGLWFGISSLLRNSPGMRMGGANGTCMSGLQDNG-----AVTEASSAGGLREWTS 613
                +P+  +   SS    +        NG        NG      V EA+  G  REWTS
Sbjct:   544 ---RPSQQYVAASSPYSAASSPYEAHMNGRTRMMTNGNGMGVAMGVQEAALVGNGREWTS 600

Query:   614 PFAEKDIFSVPRQFVTSPP 632
             PF  KD+FS+ RQ+V  PP
Sbjct:   601 PFEGKDLFSLSRQYV--PP 617

 Score = 69 (29.3 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
 Identities = 50/190 (26%), Positives = 72/190 (37%)

Query:   359 PLVSPSKVEVRQAVA-GNEGKTIQQ--VREPVIVMQ-------RPQSMNAKQIPXXXXXX 408
             PL S S  E     A G++ K +QQ  +REPV+VMQ       R QS N   +P      
Sbjct:   364 PL-SRSTEETHYVTALGDQFKRLQQQDMREPVMVMQQQQQQQQRSQSANTNVLPVSTMNA 422

Query:   409 X----PQVTAGWYAKNVPAVENVRPNAKILQGTGTRGTENQSSELFYRQAPYKEIPYMHN 464
                      +GW+  N    E  + N  +   + +    + +S L Y+Q  Y++     N
Sbjct:   423 SFTGAAAAGSGWHPAN--RSEAAQSNGYL--PSRSLPPNDLNSNLMYQQLQYQQYQGQVN 478

Query:   465 PVEXXXXXXXXXXXXXXXXXXXXXXXXXXRGSWSTMGMSSPSLAVPSSLGLFASWGSAGT 524
                                           G +S  G    SLA  SS GL   W + G+
Sbjct:   479 ---------NNGHRMAGSSAPPAVAPAASLGLFSGFG----SLAGSSSSGL--DWNTDGS 523

Query:   525 LGSSSHVDWN 534
             LG   H+D+N
Sbjct:   524 LG---HLDYN 530

 Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:   123 DRREKIRLKNEKKHQRQREKRA 144
             D RE + +  +++ Q+QR + A
Sbjct:   389 DMREPVMVMQQQQQQQQRSQSA 410


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.127   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      632       539   0.00094  119 3  11 23  0.49    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  304 KB (2156 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  57.86u 0.13s 57.99t   Elapsed:  00:00:02
  Total cpu time:  57.86u 0.13s 57.99t   Elapsed:  00:00:02
  Start:  Fri May 10 08:28:57 2013   End:  Fri May 10 08:28:59 2013

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