Your job contains 1 sequence.
>006763
MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG
FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF
ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK
KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM
IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK
VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA
DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD
RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF
VTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSNAPYAATRQPAPPPAAP
VSPPVPDLLGDLIGLDNSAAIVPADQAAASPV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006763
(632 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2117924 - symbol:AT4G23460 species:3702 "Arabi... 2602 1.4e-270 1
UNIPROTKB|Q10567 - symbol:AP1B1 "AP-1 complex subunit bet... 1987 2.0e-209 3
ZFIN|ZDB-GENE-061025-1 - symbol:ap1b1 "adaptor-related pr... 1996 9.6e-209 2
FB|FBgn0010380 - symbol:AP-1-2beta "Adaptor Protein compl... 1982 5.3e-208 2
MGI|MGI:1096368 - symbol:Ap1b1 "adaptor protein complex A... 1988 6.8e-208 2
UNIPROTKB|F1NCI1 - symbol:AP1B1 "Uncharacterized protein"... 1987 8.6e-208 2
UNIPROTKB|F1NCR9 - symbol:AP1B1 "Uncharacterized protein"... 1987 8.6e-208 2
UNIPROTKB|E2RRJ6 - symbol:AP1B1 "Uncharacterized protein"... 1988 1.4e-207 2
UNIPROTKB|F1RFI2 - symbol:AP1B1 "Uncharacterized protein"... 1987 1.8e-207 2
UNIPROTKB|I3LV02 - symbol:AP1B1 "Uncharacterized protein"... 1987 1.8e-207 2
UNIPROTKB|F1MIF2 - symbol:AP1B1 "Uncharacterized protein"... 1986 1.8e-207 2
RGD|2064 - symbol:Ap1b1 "adaptor-related protein complex ... 1971 4.2e-206 2
UNIPROTKB|P52303 - symbol:Ap1b1 "AP-1 complex subunit bet... 1971 4.2e-206 2
UNIPROTKB|C9J1E7 - symbol:AP1B1 "AP-1 complex subunit bet... 1973 6.2e-204 1
UNIPROTKB|F1S182 - symbol:LOC100517121 "Uncharacterized p... 1950 1.5e-203 2
UNIPROTKB|I3L6Y6 - symbol:AP2B1 "Uncharacterized protein"... 1950 1.5e-203 2
UNIPROTKB|E1BXC1 - symbol:AP2B1 "Uncharacterized protein"... 1949 1.9e-203 2
UNIPROTKB|E1BY12 - symbol:AP2B1 "Uncharacterized protein"... 1949 1.9e-203 2
UNIPROTKB|P63009 - symbol:AP2B1 "AP-2 complex subunit bet... 1949 1.9e-203 2
UNIPROTKB|Q08DS7 - symbol:AP2B1 "AP-1 complex subunit bet... 1949 1.9e-203 2
UNIPROTKB|E2RIV1 - symbol:AP2B1 "Uncharacterized protein"... 1949 1.9e-203 2
UNIPROTKB|P63010 - symbol:AP2B1 "AP-2 complex subunit bet... 1949 1.9e-203 2
MGI|MGI:1919020 - symbol:Ap2b1 "adaptor-related protein c... 1949 1.9e-203 2
RGD|71048 - symbol:Ap2b1 "adaptor-related protein complex... 1949 1.9e-203 2
ZFIN|ZDB-GENE-030131-6564 - symbol:ap2b1 "adaptor-related... 1944 6.3e-203 2
DICTYBASE|DDB_G0279141 - symbol:ap1b1 "beta adaptin" spec... 1959 1.9e-202 1
UNIPROTKB|G3X7G4 - symbol:AP2B1 "AP-2 complex subunit bet... 1949 2.2e-201 1
WB|WBGene00000160 - symbol:apb-1 species:6239 "Caenorhabd... 1914 1.1e-197 1
UNIPROTKB|Q7Z451 - symbol:AP2B1 "AP-2 complex subunit bet... 1868 6.9e-195 2
GENEDB_PFALCIPARUM|PFE1400c - symbol:PFE1400c "beta adapt... 1712 2.8e-176 1
UNIPROTKB|Q8I3I6 - symbol:PFE1400c "Beta adaptin protein,... 1712 2.8e-176 1
UNIPROTKB|G4N974 - symbol:MGG_03320 "AP-1 complex subunit... 1621 2.4e-168 2
ASPGD|ASPL0000034670 - symbol:AN3029 species:162425 "Emer... 1310 2.4e-166 2
UNIPROTKB|K7EJT8 - symbol:AP2B1 "AP-2 complex subunit bet... 1527 7.7e-159 2
UNIPROTKB|G4NIQ6 - symbol:MGG_04150 "AP-2 complex subunit... 1441 1.5e-147 1
ASPGD|ASPL0000003399 - symbol:AN5950 species:162425 "Emer... 1329 1.1e-135 1
POMBASE|SPBC947.02 - symbol:apl2 "AP-1 adaptor complex su... 1303 6.2e-133 1
POMBASE|SPBC2G2.06c - symbol:apl1 "AP-2 adaptor complex s... 1187 1.2e-120 1
CGD|CAL0003949 - symbol:APL2 species:5476 "Candida albica... 1174 2.9e-119 1
UNIPROTKB|Q5AEN7 - symbol:APL2 "Potential clathrin-associ... 1174 2.9e-119 1
SGD|S000001618 - symbol:APL2 "Beta-adaptin subunit of the... 985 3.1e-99 1
CGD|CAL0003766 - symbol:orf19.7212 species:5476 "Candida ... 926 5.5e-93 1
UNIPROTKB|Q59ZX9 - symbol:APL1 "Potential clathrin-associ... 926 5.5e-93 1
SGD|S000003765 - symbol:APL1 "Beta-adaptin" species:4932 ... 689 7.2e-68 1
UNIPROTKB|Q9Y6B7 - symbol:AP4B1 "AP-4 complex subunit bet... 663 4.1e-65 1
ZFIN|ZDB-GENE-040426-1284 - symbol:ap4b1 "adaptor-related... 659 1.1e-64 1
GENEDB_PFALCIPARUM|MAL7P1.164 - symbol:MAL7P1.164 "adapte... 649 1.2e-63 1
UNIPROTKB|Q8IBF8 - symbol:MAL7P1.164 "Adapter-related pro... 649 1.2e-63 1
UNIPROTKB|F1PTH0 - symbol:AP4B1 "Uncharacterized protein"... 645 3.3e-63 1
RGD|1310529 - symbol:Ap4b1 "adaptor-related protein compl... 642 6.9e-63 1
UNIPROTKB|F1SBR2 - symbol:AP4B1 "Uncharacterized protein"... 641 8.8e-63 1
UNIPROTKB|F6PZ41 - symbol:AP4B1 "Uncharacterized protein"... 639 1.4e-62 1
MGI|MGI:1337130 - symbol:Ap4b1 "adaptor-related protein c... 636 3.0e-62 1
UNIPROTKB|F1NLK7 - symbol:AP4B1 "Uncharacterized protein"... 603 9.3e-59 1
UNIPROTKB|F1NY63 - symbol:AP3B2 "Uncharacterized protein"... 389 1.0e-58 3
RGD|1308950 - symbol:Ap3b2 "adaptor-related protein compl... 377 3.7e-57 2
UNIPROTKB|F1P7W8 - symbol:AP3B2 "Uncharacterized protein"... 376 5.1e-57 2
UNIPROTKB|B7ZKS0 - symbol:AP3B2 "AP-3 complex subunit bet... 376 5.4e-57 2
UNIPROTKB|Q13367 - symbol:AP3B2 "AP-3 complex subunit bet... 375 6.7e-57 2
UNIPROTKB|E1BME2 - symbol:AP3B2 "Uncharacterized protein"... 375 6.8e-57 2
UNIPROTKB|J9P1J6 - symbol:AP3B2 "Uncharacterized protein"... 375 7.2e-57 2
UNIPROTKB|F1RI97 - symbol:F1RI97 "Uncharacterized protein... 374 9.1e-57 2
MGI|MGI:1100869 - symbol:Ap3b2 "adaptor-related protein c... 374 9.1e-57 2
DICTYBASE|DDB_G0283319 - symbol:ap4b1 "adaptor-related pr... 501 5.7e-56 2
UNIPROTKB|K7EJ01 - symbol:AP2B1 "AP-2 complex subunit bet... 568 4.8e-55 1
FB|FBgn0003210 - symbol:rb "ruby" species:7227 "Drosophil... 357 2.3e-54 2
UNIPROTKB|Q7YRF1 - symbol:AP3B1 "AP-3 complex subunit bet... 360 3.3e-54 2
UNIPROTKB|E1BW97 - symbol:AP3B1 "Uncharacterized protein"... 359 7.3e-54 2
UNIPROTKB|F1PVY2 - symbol:AP3B1 "AP-3 complex subunit bet... 356 9.9e-54 2
RGD|1310256 - symbol:Ap3b1 "adaptor-related protein compl... 351 7.1e-53 3
MGI|MGI:1333879 - symbol:Ap3b1 "adaptor-related protein c... 350 7.6e-53 3
UNIPROTKB|E5RJ68 - symbol:AP3B1 "AP-3 complex subunit bet... 347 1.3e-52 3
UNIPROTKB|O00203 - symbol:AP3B1 "AP-3 complex subunit bet... 347 1.7e-52 3
UNIPROTKB|Q32PG1 - symbol:AP3B1 "AP-3 complex subunit bet... 345 2.0e-52 2
UNIPROTKB|K7ERB2 - symbol:AP2B1 "AP-2 complex subunit bet... 524 2.2e-50 1
UNIPROTKB|F1S2G1 - symbol:F1S2G1 "Uncharacterized protein... 326 3.0e-50 2
DICTYBASE|DDB_G0274003 - symbol:ap3b-2 "beta adaptin" spe... 287 2.7e-49 3
DICTYBASE|DDB_G0272578 - symbol:ap3b-1 "beta adaptin" spe... 287 2.7e-49 3
UNIPROTKB|H7C034 - symbol:AP1B1 "AP-1 complex subunit bet... 473 1.6e-47 2
WB|WBGene00000163 - symbol:apb-3 species:6239 "Caenorhabd... 504 2.3e-47 1
UNIPROTKB|B7ZKR7 - symbol:AP3B2 "AP3B2 protein" species:9... 375 7.5e-45 2
UNIPROTKB|D4A3Q4 - symbol:Ap4b1 "Protein Ap4b1" species:1... 461 1.2e-43 1
UNIPROTKB|B7Z4X3 - symbol:AP4B1 "AP-4 complex subunit bet... 261 6.0e-41 2
POMBASE|SPAC23H3.06 - symbol:apl6 "AP-3 adaptor complex s... 427 6.9e-41 2
UNIPROTKB|K7EN71 - symbol:AP2B1 "AP-2 complex subunit bet... 434 7.5e-41 1
TAIR|locus:2099961 - symbol:PAT2 "protein affected traf&#... 284 1.5e-40 2
UNIPROTKB|B1ALD0 - symbol:AP4B1 "AP-4 complex subunit bet... 421 1.8e-39 1
ASPGD|ASPL0000055849 - symbol:AN0165 species:162425 "Emer... 256 2.7e-39 3
UNIPROTKB|F1NY20 - symbol:AP4B1 "Uncharacterized protein"... 413 1.3e-38 1
UNIPROTKB|I3LRS3 - symbol:I3LRS3 "Uncharacterized protein... 258 8.1e-38 3
UNIPROTKB|B1ALD2 - symbol:AP4B1 "AP-4 complex subunit bet... 312 3.0e-27 1
CGD|CAL0003756 - symbol:orf19.1323 species:5476 "Candida ... 314 4.3e-26 2
UNIPROTKB|Q59TL3 - symbol:APL6 "Potential clathrin-associ... 314 4.3e-26 2
UNIPROTKB|B1ALD1 - symbol:AP4B1 "AP-4 complex subunit bet... 298 1.0e-25 1
UNIPROTKB|F5GWU4 - symbol:AP3B2 "AP-3 complex subunit bet... 265 4.0e-22 1
GENEDB_PFALCIPARUM|PFF0655c - symbol:PFF0655c "adapter-re... 211 4.5e-20 2
UNIPROTKB|C6KSX7 - symbol:PFF0655c "Adapter-related prote... 211 4.5e-20 2
SGD|S000003493 - symbol:APL6 "Beta3-like subunit of the y... 170 4.6e-17 3
POMBASE|SPBC146.14c - symbol:sec26 "coatomer beta subunit... 144 2.0e-14 2
UNIPROTKB|K7EJX1 - symbol:AP2B1 "AP-2 complex subunit bet... 189 6.6e-14 1
WARNING: Descriptions of 112 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2117924 [details] [associations]
symbol:AT4G23460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 GO:GO:0006886
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
eggNOG:COG5096 HOGENOM:HOG000163270 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
OMA:SDPNPLI EMBL:AL031326 EMBL:AL161559 EMBL:AY065000 EMBL:AF216387
IPI:IPI00521980 PIR:T05384 RefSeq:NP_194077.1 UniGene:At.2441
ProteinModelPortal:O81742 SMR:O81742 STRING:O81742 PaxDb:O81742
PRIDE:O81742 EnsemblPlants:AT4G23460.1 GeneID:828445
KEGG:ath:AT4G23460 TAIR:At4g23460 InParanoid:Q8VZF2
PhylomeDB:O81742 ProtClustDB:CLSN2685309 Genevestigator:O81742
Uniprot:O81742
Length = 893
Score = 2602 (921.0 bits), Expect = 1.4e-270, P = 1.4e-270
Identities = 528/626 (84%), Positives = 547/626 (87%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
Sbjct: 43 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 102
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLCDPLQ+CLKDDDPYVRKTAAICVAKL+DINAELVEDRG
Sbjct: 103 LIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRG 162
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FLE+LKDLISD S+ PIFEI S L+KLLTALNECTEWGQVF
Sbjct: 163 FLEALKDLISDNNPMVVANAVAALAEIQENSTSPIFEINSTILTKLLTALNECTEWGQVF 222
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
ILDALSRYKA+D REAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV+RNLCK
Sbjct: 223 ILDALSRYKASDPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCK 282
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 300
KMAPPLVTLLSAEPEIQYVALRNINLIVQ+RPTILAHEIKVFFCKYNDPIYVKMEKLEIM
Sbjct: 283 KMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 342
Query: 301 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 360
IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK
Sbjct: 343 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 402
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 420
VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA
Sbjct: 403 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 462
Query: 421 DXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 480
D AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD
Sbjct: 463 DELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 522
Query: 481 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF 540
RAYIYWRLLSTDPEAAKDVVLAEKPVI+DDSNQLDPSLLDELLANI+TLSSVYHKPPEAF
Sbjct: 523 RAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNQLDPSLLDELLANISTLSSVYHKPPEAF 582
Query: 541 VTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSNXXXXXXXXXXXXXXXX 600
VTR+KTT +T+DEDY GSE GY +A + D ASP ++
Sbjct: 583 VTRLKTTVQKTEDEDYVEGSETGYPEASGNPVDGAASPSATTG----------YVTKLAA 632
Query: 601 XXXXXXDLLGDLIGLDNSAAIVPADQ 626
DLLGDL+G DN AAIVP D+
Sbjct: 633 APAPVPDLLGDLMGSDN-AAIVPVDE 657
>UNIPROTKB|Q10567 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=TAS]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=TAS]
[GO:0032588 "trans-Golgi network membrane" evidence=TAS]
[GO:0050690 "regulation of defense response to virus by virus"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005829 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006886 GO:GO:0000139 GO:GO:0050690 GO:GO:0016032
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005765 GO:GO:0032588 GO:GO:0019886 GO:GO:0008565
Pathway_Interaction_DB:hnf3apathway GO:GO:0006897 GO:GO:0005215
GO:GO:0030659 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:L13939
EMBL:CT841508 EMBL:AC000041 EMBL:AC002059 EMBL:BC046242 EMBL:U36268
EMBL:U36250 EMBL:U36251 EMBL:U36252 EMBL:U36253 EMBL:U36254
EMBL:U36255 EMBL:U36256 EMBL:U36257 EMBL:U36258 EMBL:U36259
EMBL:U36260 EMBL:U36261 EMBL:U36262 EMBL:U36263 EMBL:U36264
EMBL:U36265 EMBL:U36266 EMBL:U36267 EMBL:AF379038 EMBL:AF379039
EMBL:L48038 IPI:IPI00328257 IPI:IPI00384489 IPI:IPI00413947
IPI:IPI00940292 PIR:I54360 RefSeq:NP_001118.3 RefSeq:NP_001159491.1
RefSeq:NP_663782.2 UniGene:Hs.368794 ProteinModelPortal:Q10567
SMR:Q10567 DIP:DIP-24207N IntAct:Q10567 STRING:Q10567
PhosphoSite:Q10567 DMDM:290457628 PaxDb:Q10567 PRIDE:Q10567
DNASU:162 Ensembl:ENST00000317368 Ensembl:ENST00000356015
Ensembl:ENST00000357586 Ensembl:ENST00000402502
Ensembl:ENST00000405198 Ensembl:ENST00000415447
Ensembl:ENST00000432560 GeneID:162 KEGG:hsa:162 UCSC:uc003afi.3
UCSC:uc003afj.3 CTD:162 GeneCards:GC22M029723 HGNC:HGNC:554
MIM:600157 neXtProt:NX_Q10567 PharmGKB:PA24844 InParanoid:Q10567
KO:K12392 OMA:PGNPSCT PhylomeDB:Q10567 ChiTaRS:AP1B1 GenomeRNAi:162
NextBio:647 ArrayExpress:Q10567 Bgee:Q10567 CleanEx:HS_AP1B1
Genevestigator:Q10567 GermOnline:ENSG00000100280 GO:GO:0016044
GO:GO:0006892 Uniprot:Q10567
Length = 949
Score = 1987 (704.5 bits), Expect = 2.0e-209, Sum P(3) = 2.0e-209
Identities = 386/543 (71%), Positives = 457/543 (84%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.8e-207, Sum P(2) = 1.8e-207
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 627 DLLGDLLNLD 636
Score = 40 (19.1 bits), Expect = 2.0e-209, Sum P(3) = 2.0e-209
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 554 EDYPNGSEQGYS--DAPTHVADEGASPQTSSSN 584
+D PN +E + D P + E AS + SSN
Sbjct: 851 KDIPNENEAQFQIRDCPLNA--EAASSKLQSSN 881
Score = 37 (18.1 bits), Expect = 2.0e-209, Sum P(3) = 2.0e-209
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 488 LLSTDPEAAKDVVLAEKPVISDDSNQLDP---SLLD--ELLANIATLSSVYHKPPEAFVT 542
L+ +PE P + +N P L D +L + + TLS Y P ++
Sbjct: 666 LMGDEPEGIGGTNFVAPPTAAVPANLGAPIGSGLSDLFDLTSGVGTLSGSYVAPKAVWLP 725
Query: 543 RVK 545
+K
Sbjct: 726 AMK 728
>ZFIN|ZDB-GENE-061025-1 [details] [associations]
symbol:ap1b1 "adaptor-related protein complex 1, beta
1 subunit" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 ZFIN:ZDB-GENE-061025-1 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
OMA:PGNPSCT GeneTree:ENSGT00530000063138 EMBL:BX664747
IPI:IPI00897502 RefSeq:NP_001122002.1 UniGene:Dr.31764 SMR:A5PMS9
Ensembl:ENSDART00000022518 Ensembl:ENSDART00000137128 GeneID:562166
KEGG:dre:562166 NextBio:20884280 Uniprot:A5PMS9
Length = 947
Score = 1996 (707.7 bits), Expect = 9.6e-209, Sum P(2) = 9.6e-209
Identities = 393/581 (67%), Positives = 470/581 (80%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD + + ++ T++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQTINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D RE+++I ERVTPRL HAN AVVLSAVK++++ ME++ D L
Sbjct: 221 FILDCLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ +I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICHIGTLASVYHKPPS 579
Query: 539 AFVT--------RVKTTASRTDDEDYPNGSEQGYSDAPTHV 571
AFV R+ A + + P + G S+AP V
Sbjct: 580 AFVEGSRGVQHKRLPARAGSGESAESPEVGQSGTSEAPPAV 620
Score = 45 (20.9 bits), Expect = 9.6e-209, Sum P(2) = 9.6e-209
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 607 DLLGDLIGLDNSAAI--VPADQ 626
DLLGDL+ LD + A VP+ Q
Sbjct: 626 DLLGDLLNLDLAPATTTVPSVQ 647
Score = 44 (20.5 bits), Expect = 1.2e-208, Sum P(2) = 1.2e-208
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 554 EDYPNGSEQGYSDAPTHVADEGASPQTSSSN 584
+D PN +E + H+ + AS + SN
Sbjct: 852 KDIPNDNEAQFQIKDVHLNSDAASNKLQGSN 882
>FB|FBgn0010380 [details] [associations]
symbol:AP-1-2beta "Adaptor Protein complex 1/2, beta subunit"
species:7227 "Drosophila melanogaster" [GO:0005905 "coated pit"
evidence=IDA] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=IDA] [GO:0030121 "AP-1 adaptor complex" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0008021
"synaptic vesicle" evidence=TAS] [GO:0016183 "synaptic vesicle
coating" evidence=TAS] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=IDA] [GO:0048749 "compound eye development" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0008021 EMBL:AE014298
GO:GO:0005905 GO:GO:0007269 eggNOG:COG5096 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
GeneTree:ENSGT00530000063138 OMA:YDISATM GO:GO:0030119
GO:GO:0016183 GO:GO:0048749 EMBL:BT016054 EMBL:X75910 PIR:S39295
RefSeq:NP_523415.1 UniGene:Dm.2885 SMR:Q24253 DIP:DIP-20749N
IntAct:Q24253 MINT:MINT-316769 STRING:Q24253
EnsemblMetazoa:FBtr0074789 GeneID:32987 KEGG:dme:Dmel_CG12532
UCSC:CG12532-RA CTD:32987 FlyBase:FBgn0010380 InParanoid:Q24253
OrthoDB:EOG4GHX41 GenomeRNAi:32987 NextBio:781377 Uniprot:Q24253
Length = 921
Score = 1982 (702.8 bits), Expect = 5.3e-208, Sum P(2) = 5.3e-208
Identities = 402/632 (63%), Positives = 484/632 (76%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +D NP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKLYDI+A +VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISATMVEDQG 160
Query: 121 FLESLKDLISDXX--XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQ 178
FL+ LKDL+SD S +P+ E+ S T++KLLTALNECTEWGQ
Sbjct: 161 FLDQLKDLLSDSNPMVVANAVAALSEINEASQSGQPLVEMNSVTINKLLTALNECTEWGQ 220
Query: 179 VFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRN 237
VFILD+L+ Y D REA++I ER+TPRL HAN AVVLSAVK++++ +E+++S +D
Sbjct: 221 VFILDSLANYSPKDEREAQSICERITPRLAHANAAVVLSAVKVLMKLLEMLSSDSDFCAT 280
Query: 238 LCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKL 297
L KK+APPLVTLLS+EPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL
Sbjct: 281 LTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL 340
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELI 357
+IMI+LA+ NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E +AERC+S LL+LI
Sbjct: 341 DIMIRLANQSNIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAERCVSTLLDLI 400
Query: 358 KIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERI 417
+ KVNYVVQEAI+VIKDIFR+YPN YESII+TLCE+LDTLDEPEA+ASM+WIIGEYAERI
Sbjct: 401 QTKVNYVVQEAIVVIKDIFRKYPNKYESIISTLCENLDTLDEPEARASMVWIIGEYAERI 460
Query: 418 DNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPD 477
DNAD AQVQLQLLTA VKLFLK+P++ Q+++Q VL+ AT ++DNPD
Sbjct: 461 DNADELLDSFLEGFQDENAQVQLQLLTAVVKLFLKRPSD-TQELVQHVLSLATQDSDNPD 519
Query: 478 LRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPP 537
LRDR +IYWRLLSTDP AAK+VVLA+KP+IS++++ L+P+LLDEL+ +I++L+SVYHKPP
Sbjct: 520 LRDRGFIYWRLLSTDPAAAKEVVLADKPLISEETDLLEPTLLDELICHISSLASVYHKPP 579
Query: 538 EAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEG-ASP-QTSSSNXXXXXXXXXXX 595
AFV + R + GS G A E P Q S
Sbjct: 580 TAFVEG-RGAGVRKSLPNRAAGSAAGAEQAENAAGSEAMVIPNQESLIGDLLSMDINAPA 638
Query: 596 XXXXXXXXXXXDLLGDLIGLDNSAAIVPADQA 627
DLLG GLD PA+ A
Sbjct: 639 MPSAPAATSNVDLLGG--GLDILLGGPPAEAA 668
Score = 52 (23.4 bits), Expect = 5.3e-208, Sum P(2) = 5.3e-208
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 608 LLGDLIGLDNSAAIVPADQAAASPV 632
L+GDL+ +D +A +P+ AA S V
Sbjct: 625 LIGDLLSMDINAPAMPSAPAATSNV 649
>MGI|MGI:1096368 [details] [associations]
symbol:Ap1b1 "adaptor protein complex AP-1, beta 1 subunit"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0048268 "clathrin coat assembly"
evidence=ISO] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 MGI:MGI:1096368
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 EMBL:CH466574
GO:GO:0006897 GO:GO:0005802 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392 OMA:PGNPSCT
ChiTaRS:AP1B1 EMBL:Y07919 EMBL:AK159273 EMBL:BC008513
IPI:IPI00346965 RefSeq:NP_031480.2 UniGene:Mm.274816
ProteinModelPortal:O35643 SMR:O35643 IntAct:O35643 STRING:O35643
PhosphoSite:O35643 PaxDb:O35643 PRIDE:O35643
Ensembl:ENSMUST00000009234 GeneID:11764 KEGG:mmu:11764
GeneTree:ENSGT00530000063138 NextBio:279521 Bgee:O35643
CleanEx:MM_AP1B1 Genevestigator:O35643 Uniprot:O35643
Length = 943
Score = 1988 (704.9 bits), Expect = 6.8e-208, Sum P(2) = 6.8e-208
Identities = 386/543 (71%), Positives = 457/543 (84%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 45 (20.9 bits), Expect = 6.8e-208, Sum P(2) = 6.8e-208
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 607 DLLGDLIGLDNSAAIVPADQAAAS 630
DLLGDL+ LD + AA+S
Sbjct: 627 DLLGDLLNLDLGPPVSGPPLAASS 650
>UNIPROTKB|F1NCI1 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:AADN02050473 EMBL:AADN02050474
EMBL:AADN02050475 IPI:IPI00820134 Ensembl:ENSGALT00000013205
Uniprot:F1NCI1
Length = 922
Score = 1987 (704.5 bits), Expect = 8.6e-208, Sum P(2) = 8.6e-208
Identities = 386/543 (71%), Positives = 457/543 (84%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 29 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 88
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 89 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 148
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 149 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 208
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 209 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 268
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 269 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 328
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 329 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 388
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 389 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 448
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 449 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 507
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 508 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 567
Query: 539 AFV 541
AFV
Sbjct: 568 AFV 570
Score = 45 (20.9 bits), Expect = 8.6e-208, Sum P(2) = 8.6e-208
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 607 DLLGDLIGLDNSAAIVPADQAAAS 630
DLLGDL+ LD + AA+S
Sbjct: 611 DLLGDLLNLDLGPPVSGPPLAASS 634
>UNIPROTKB|F1NCR9 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02050473 EMBL:AADN02050474 EMBL:AADN02050475
IPI:IPI00571321 Ensembl:ENSGALT00000038029 Uniprot:F1NCR9
Length = 881
Score = 1987 (704.5 bits), Expect = 8.6e-208, Sum P(2) = 8.6e-208
Identities = 386/543 (71%), Positives = 457/543 (84%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 29 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 88
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 89 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 148
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 149 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 208
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 209 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 268
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 269 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 328
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 329 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 388
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 389 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 448
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 449 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 507
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 508 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 567
Query: 539 AFV 541
AFV
Sbjct: 568 AFV 570
Score = 45 (20.9 bits), Expect = 8.6e-208, Sum P(2) = 8.6e-208
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 607 DLLGDLIGLDNSAAIVPADQAAAS 630
DLLGDL+ LD + AA+S
Sbjct: 613 DLLGDLLNLDLGPPVSGPPLAASS 636
>UNIPROTKB|E2RRJ6 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 OMA:PGNPSCT GeneTree:ENSGT00530000063138
EMBL:AAEX03014791 EMBL:AAEX03014790 ProteinModelPortal:E2RRJ6
Ensembl:ENSCAFT00000019193 NextBio:20860135 Uniprot:E2RRJ6
Length = 939
Score = 1988 (704.9 bits), Expect = 1.4e-207, Sum P(2) = 1.4e-207
Identities = 393/581 (67%), Positives = 468/581 (80%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYTPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 579
Query: 539 AFVTRVKTTASRT-DDEDYPNGSEQGYSDAPTHVADEGASP 578
AFV + ++ N S + AP A G P
Sbjct: 580 AFVEGGRGVVHKSLPPRTASNESTESPETAPAG-APSGEQP 619
Score = 42 (19.8 bits), Expect = 1.4e-207, Sum P(2) = 1.4e-207
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 627 DLLGDLLNLD 636
>UNIPROTKB|F1RFI2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:CU640468 Ensembl:ENSSSCT00000010934 Uniprot:F1RFI2
Length = 947
Score = 1987 (704.5 bits), Expect = 1.8e-207, Sum P(2) = 1.8e-207
Identities = 386/543 (71%), Positives = 457/543 (84%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYTPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.8e-207, Sum P(2) = 1.8e-207
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 627 DLLGDLLNLD 636
>UNIPROTKB|I3LV02 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:CU640468 Ensembl:ENSSSCT00000028355 Uniprot:I3LV02
Length = 949
Score = 1987 (704.5 bits), Expect = 1.8e-207, Sum P(2) = 1.8e-207
Identities = 386/543 (71%), Positives = 457/543 (84%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYTPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.8e-207, Sum P(2) = 1.8e-207
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 627 DLLGDLLNLD 636
>UNIPROTKB|F1MIF2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:DAAA02045602 IPI:IPI00690120 UniGene:Bt.35586
Ensembl:ENSBTAT00000001576 Uniprot:F1MIF2
Length = 946
Score = 1986 (704.2 bits), Expect = 1.8e-207, Sum P(2) = 1.8e-207
Identities = 385/543 (70%), Positives = 457/543 (84%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYTPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP +L HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEVLKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 43 (20.2 bits), Expect = 1.8e-207, Sum P(2) = 1.8e-207
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 607 DLLGDLIGLDNSAAIVPADQAAASPV 632
DLLGDL+ LD V AAS V
Sbjct: 627 DLLGDLLNLDLGPP-VSGPPLAASAV 651
>RGD|2064 [details] [associations]
symbol:Ap1b1 "adaptor-related protein complex 1, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030118 "clathrin
coat" evidence=IC] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030276 "clathrin binding" evidence=IC] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0048268
"clathrin coat assembly" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
RGD:2064 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
GO:GO:0030276 GO:GO:0030118 GO:GO:0048268 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
EMBL:M77245 IPI:IPI00201713 IPI:IPI00781585 PIR:B32105
RefSeq:NP_058973.1 UniGene:Rn.37383 PDB:1W63 PDBsum:1W63
ProteinModelPortal:P52303 SMR:P52303 IntAct:P52303 MINT:MINT-1344522
STRING:P52303 PhosphoSite:P52303 PRIDE:P52303 GeneID:29663
KEGG:rno:29663 UCSC:RGD:2064 EvolutionaryTrace:P52303 NextBio:609967
ArrayExpress:P52303 Genevestigator:P52303
GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 1971 (698.9 bits), Expect = 4.2e-206, Sum P(2) = 4.2e-206
Identities = 384/543 (70%), Positives = 454/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ + +++KLLTALNECTEW Q+
Sbjct: 161 FLDTLKDLISDSNPMVVANRVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE QYV LRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 45 (20.9 bits), Expect = 4.2e-206, Sum P(2) = 4.2e-206
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 607 DLLGDLIGLDNSAAIVPADQAAAS 630
DLLGDL+ LD + AA+S
Sbjct: 627 DLLGDLLNLDLGPPVSGPPLAASS 650
Score = 40 (19.1 bits), Expect = 1.4e-205, Sum P(2) = 1.4e-205
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 554 EDYPNGSEQGYS--DAPTHVADEGASPQTSSSN 584
+D PN +E + D P + E AS + SSN
Sbjct: 854 KDIPNENEAQFQIRDCPLNT--EAASSKLQSSN 884
>UNIPROTKB|P52303 [details] [associations]
symbol:Ap1b1 "AP-1 complex subunit beta-1" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:2064 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006897 GO:GO:0030276 GO:GO:0030118 GO:GO:0048268
eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 CTD:162 KO:K12392 EMBL:M77245 IPI:IPI00201713
IPI:IPI00781585 PIR:B32105 RefSeq:NP_058973.1 UniGene:Rn.37383
PDB:1W63 PDBsum:1W63 ProteinModelPortal:P52303 SMR:P52303
IntAct:P52303 MINT:MINT-1344522 STRING:P52303 PhosphoSite:P52303
PRIDE:P52303 GeneID:29663 KEGG:rno:29663 UCSC:RGD:2064
EvolutionaryTrace:P52303 NextBio:609967 ArrayExpress:P52303
Genevestigator:P52303 GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 1971 (698.9 bits), Expect = 4.2e-206, Sum P(2) = 4.2e-206
Identities = 384/543 (70%), Positives = 454/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ + +++KLLTALNECTEW Q+
Sbjct: 161 FLDTLKDLISDSNPMVVANRVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE QYV LRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 45 (20.9 bits), Expect = 4.2e-206, Sum P(2) = 4.2e-206
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 607 DLLGDLIGLDNSAAIVPADQAAAS 630
DLLGDL+ LD + AA+S
Sbjct: 627 DLLGDLLNLDLGPPVSGPPLAASS 650
Score = 40 (19.1 bits), Expect = 1.4e-205, Sum P(2) = 1.4e-205
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 554 EDYPNGSEQGYS--DAPTHVADEGASPQTSSSN 584
+D PN +E + D P + E AS + SSN
Sbjct: 854 KDIPNENEAQFQIRDCPLNT--EAASSKLQSSN 884
>UNIPROTKB|C9J1E7 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270 PANTHER:PTHR11134
EMBL:AC000041 EMBL:AC002059 HGNC:HGNC:554 ChiTaRS:AP1B1
IPI:IPI00946351 ProteinModelPortal:C9J1E7 SMR:C9J1E7 STRING:C9J1E7
PRIDE:C9J1E7 Ensembl:ENST00000421126 ArrayExpress:C9J1E7
Bgee:C9J1E7 Uniprot:C9J1E7
Length = 578
Score = 1973 (699.6 bits), Expect = 6.2e-204, P = 6.2e-204
Identities = 383/539 (71%), Positives = 454/539 (84%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPP 537
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPP 578
>UNIPROTKB|F1S182 [details] [associations]
symbol:LOC100517121 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR013037 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF002291 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:CU927946 RefSeq:XP_003131766.3
Ensembl:ENSSSCT00000019278 GeneID:100517121 KEGG:ssc:100517121
Uniprot:F1S182
Length = 819
Score = 1950 (691.5 bits), Expect = 1.5e-203, Sum P(2) = 1.5e-203
Identities = 377/543 (69%), Positives = 454/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ + +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPNDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.5e-203, Sum P(2) = 1.5e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>UNIPROTKB|I3L6Y6 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD Ensembl:ENSSSCT00000025334 Uniprot:I3L6Y6
Length = 939
Score = 1950 (691.5 bits), Expect = 1.5e-203, Sum P(2) = 1.5e-203
Identities = 377/543 (69%), Positives = 454/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 29 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 88
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 89 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 148
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 149 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 208
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ + +D L
Sbjct: 209 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPNDSDYYNML 268
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 269 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 328
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 329 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 388
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 389 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 448
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 449 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 507
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 508 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 567
Query: 539 AFV 541
AFV
Sbjct: 568 AFV 570
Score = 42 (19.8 bits), Expect = 1.5e-203, Sum P(2) = 1.5e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 614 DLLGDLLNLD 623
>UNIPROTKB|E1BXC1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00821954 Ensembl:ENSGALT00000040164 ArrayExpress:E1BXC1
Uniprot:E1BXC1
Length = 938
Score = 1949 (691.1 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>UNIPROTKB|E1BY12 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00591263 Ensembl:ENSGALT00000003347 ArrayExpress:E1BY12
Uniprot:E1BY12
Length = 952
Score = 1949 (691.1 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>UNIPROTKB|P63009 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0005215 "transporter activity" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0005905 GO:GO:0005215
UniGene:Bt.88309 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:M34177 IPI:IPI00845219 PIR:B35553
ProteinModelPortal:P63009 SMR:P63009 DIP:DIP-44826N STRING:P63009
Uniprot:P63009
Length = 937
Score = 1949 (691.1 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>UNIPROTKB|Q08DS7 [details] [associations]
symbol:AP2B1 "AP-1 complex subunit beta-1" species:9913
"Bos taurus" [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006897 EMBL:BC123583 IPI:IPI00696360
RefSeq:NP_001068593.1 UniGene:Bt.88309 ProteinModelPortal:Q08DS7
SMR:Q08DS7 STRING:Q08DS7 PRIDE:Q08DS7 GeneID:282183 KEGG:bta:282183
CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
InParanoid:Q08DS7 KO:K11825 OrthoDB:EOG4PG607 NextBio:20806011
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 Uniprot:Q08DS7
Length = 951
Score = 1949 (691.1 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>UNIPROTKB|E2RIV1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 CTD:163 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AAEX03006623 RefSeq:XP_853723.1
ProteinModelPortal:E2RIV1 Ensembl:ENSCAFT00000028998 GeneID:480605
KEGG:cfa:480605 Uniprot:E2RIV1
Length = 951
Score = 1949 (691.1 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>UNIPROTKB|P63010 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0048268 "clathrin coat
assembly" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0030669 "clathrin-coated endocytic vesicle
membrane" evidence=TAS] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13685 InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 EMBL:M34175
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111045
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007411 GO:GO:0007173 GO:GO:0048011 GO:GO:0006886
GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030669 GO:GO:0019886 GO:GO:0008565
GO:GO:0007268 GO:GO:0005905 GO:GO:0005802 GO:GO:0048488
GO:GO:0007269 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 GO:GO:0042059 PDB:2JKR PDB:2JKT PDBsum:2JKR
PDBsum:2JKT PDB:2VGL PDB:2XA7 PDBsum:2VGL PDBsum:2XA7 EMBL:AC006237
EMBL:CH471147 EMBL:BC006201 IPI:IPI00784156 IPI:IPI00784366
PIR:A35553 RefSeq:NP_001025177.1 RefSeq:NP_001273.1
UniGene:Hs.514819 PDB:1E42 PDB:2G30 PDB:2IV8 PDB:2IV9 PDBsum:1E42
PDBsum:2G30 PDBsum:2IV8 PDBsum:2IV9 ProteinModelPortal:P63010
SMR:P63010 DIP:DIP-33098N IntAct:P63010 MINT:MINT-256705
STRING:P63010 PhosphoSite:P63010 DMDM:51702211 PaxDb:P63010
PRIDE:P63010 DNASU:163 Ensembl:ENST00000262325
Ensembl:ENST00000312678 Ensembl:ENST00000537622 GeneID:163
KEGG:hsa:163 UCSC:uc002hjq.3 UCSC:uc002hjr.3 GeneCards:GC17P033914
HGNC:HGNC:563 HPA:CAB017631 MIM:601025 neXtProt:NX_P63010
PharmGKB:PA24854 OMA:DCHLNAD ChiTaRS:AP2B1 EvolutionaryTrace:P63010
GenomeRNAi:163 NextBio:653 ArrayExpress:P63010 Bgee:P63010
CleanEx:HS_AP2B1 Genevestigator:P63010 GermOnline:ENSG00000006125
Uniprot:P63010
Length = 937
Score = 1949 (691.1 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>MGI|MGI:1919020 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1
subunit" species:10090 "Mus musculus" [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030118 "clathrin coat" evidence=ISO] [GO:0030131 "clathrin
adaptor complex" evidence=ISO] [GO:0030276 "clathrin binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0048268 "clathrin coat assembly" evidence=ISO]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 MGI:MGI:1919020 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005905 GO:GO:0005802 GO:GO:0048488 GO:GO:0007269
GO:GO:0048268 CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 OMA:DCHLNAD ChiTaRS:AP2B1
EMBL:AK004975 EMBL:BC046772 IPI:IPI00119689 IPI:IPI00378063
RefSeq:NP_001030931.1 RefSeq:NP_082191.1 UniGene:Mm.39053
ProteinModelPortal:Q9DBG3 SMR:Q9DBG3 IntAct:Q9DBG3
MINT:MINT-1870047 STRING:Q9DBG3 PhosphoSite:Q9DBG3 PaxDb:Q9DBG3
PRIDE:Q9DBG3 Ensembl:ENSMUST00000018875 Ensembl:ENSMUST00000065692
GeneID:71770 KEGG:mmu:71770 UCSC:uc007kou.1 NextBio:334467
Bgee:Q9DBG3 CleanEx:MM_AP2B1 Genevestigator:Q9DBG3
GermOnline:ENSMUSG00000035152 Uniprot:Q9DBG3
Length = 937
Score = 1949 (691.1 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>RGD|71048 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030118 "clathrin coat" evidence=IDA] [GO:0030119
"AP-type membrane coat adaptor complex" evidence=TAS] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=IMP;IPI] [GO:0048268 "clathrin coat assembly" evidence=IDA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:71048 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0032403
GO:GO:0008565 GO:GO:0005905 GO:GO:0005802 GO:GO:0030276
GO:GO:0030118 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 GO:GO:0030119 OMA:DCHLNAD EMBL:M34176
EMBL:M77246 IPI:IPI00231502 IPI:IPI00389753 PIR:C35553
RefSeq:NP_542150.1 RefSeq:XP_003750923.1 UniGene:Rn.56138 PDB:3H1Z
PDB:3HS9 PDBsum:3H1Z PDBsum:3HS9 ProteinModelPortal:P62944
SMR:P62944 MINT:MINT-122517 STRING:P62944 PhosphoSite:P62944
PRIDE:P62944 Ensembl:ENSRNOT00000013363 Ensembl:ENSRNOT00000013629
GeneID:100912146 GeneID:140670 KEGG:rno:100912146 KEGG:rno:140670
EvolutionaryTrace:P62944 NextBio:620655 ArrayExpress:P62944
Genevestigator:P62944 GermOnline:ENSRNOG00000009988 Uniprot:P62944
Length = 937
Score = 1949 (691.1 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
>ZFIN|ZDB-GENE-030131-6564 [details] [associations]
symbol:ap2b1 "adaptor-related protein complex 2,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
ZFIN:ZDB-GENE-030131-6564 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
HOVERGEN:HBG050515 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:BC049138 IPI:IPI00511115
UniGene:Dr.150746 ProteinModelPortal:Q7ZUF4 SMR:Q7ZUF4
ArrayExpress:Q7ZUF4 Uniprot:Q7ZUF4
Length = 951
Score = 1944 (689.4 bits), Expect = 6.3e-203, Sum P(2) = 6.3e-203
Identities = 375/543 (69%), Positives = 452/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDEREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK++PPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLSPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASHANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+ +MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARGAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 42 (19.8 bits), Expect = 6.3e-203, Sum P(2) = 6.3e-203
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 626 DLLGDLLNLD 635
Score = 38 (18.4 bits), Expect = 1.7e-202, Sum P(2) = 1.7e-202
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 554 EDYPNGSEQGYSDAPTHVADEGASPQTSSSN 584
+D PN +E Y H+ + S + S+N
Sbjct: 856 KDIPNENELQYQIKDCHLNADTVSGKLQSNN 886
>DICTYBASE|DDB_G0279141 [details] [associations]
symbol:ap1b1 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0030665 "clathrin-coated
vesicle membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 dictyBase:DDB_G0279141 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 EMBL:AAFI02000027 eggNOG:COG5096 GO:GO:0030131
GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 KO:K12392 RefSeq:XP_641846.1 HSSP:P63010
ProteinModelPortal:Q54X82 SMR:Q54X82 STRING:Q54X82 PRIDE:Q54X82
EnsemblProtists:DDB0234067 GeneID:8621892 KEGG:ddi:DDB_G0279141
OMA:SDPNPLI ProtClustDB:CLSZ2735785 Uniprot:Q54X82
Length = 942
Score = 1959 (694.7 bits), Expect = 1.9e-202, P = 1.9e-202
Identities = 387/579 (66%), Positives = 461/579 (79%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS LFT V+NCMQT NLELKKLVYLY++NYAK+ PD AILAVNTF KD+ DPNP
Sbjct: 41 MTVGKDVSMLFTHVLNCMQTHNLELKKLVYLYVMNYAKNHPDRAILAVNTFQKDASDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVD ITE+LC+PL+ LKD DPYVRKTAA+CVAKLYD+N ELVE++G
Sbjct: 101 LIRALAVRTMGCIRVDNITEHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQG 160
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FL L DL+ D S + +F I S L+KLL ALNECTEWGQVF
Sbjct: 161 FLNILNDLLGDSNPMVVANAVASLTEIDEVSKKEVFRIHSGNLNKLLAALNECTEWGQVF 220
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
IL++L +Y D++EAEN+ ERV PRLQHAN AVVLSAVK++++ M I + DV+R CK
Sbjct: 221 ILNSLCKYTPRDSQEAENVCERVAPRLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCK 280
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 300
KMAPPLVTLLS EPEIQ++ LRNINLIVQ+RP IL +E+KVFFCKYNDPIYVKMEKLEIM
Sbjct: 281 KMAPPLVTLLSKEPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDPIYVKMEKLEIM 340
Query: 301 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 360
I LA+++NI++VLLEFKEYATE+DV+FVRKAVRAIGRCAIK++RA+ERCI VLL+LI+ K
Sbjct: 341 IMLANEKNIEEVLLEFKEYATEIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTK 400
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 420
VNYVVQEAIIVIKDIFR+YPN YE IIATLC +L++LDEPEAKASMIWIIGEYAERIDNA
Sbjct: 401 VNYVVQEAIIVIKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERIDNA 460
Query: 421 DXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 480
+QVQLQLLT+ VKLFLK+P + QQM+Q VLN +T E+DNPDLRD
Sbjct: 461 HELLNSFLEGFKDENSQVQLQLLTSIVKLFLKRPKDA-QQMVQTVLNLSTQESDNPDLRD 519
Query: 481 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF 540
R ++YWRLLSTD EAAK VVL+EKP+I+D ++ LD SLL+EL+ NI+TL+SVYHKPPE F
Sbjct: 520 RGFVYWRLLSTDFEAAKAVVLSEKPLITDTTSHLDESLLNELILNISTLASVYHKPPETF 579
Query: 541 VTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQ 579
VT++K R N E+ + P +V D+ + Q
Sbjct: 580 VTKLKGLNKR----GLRNKEEED-EEEPDYVDDDNMNNQ 613
>UNIPROTKB|G3X7G4 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:DAAA02048460 Ensembl:ENSBTAT00000027078
Uniprot:G3X7G4
Length = 598
Score = 1949 (691.1 bits), Expect = 2.2e-201, P = 2.2e-201
Identities = 377/543 (69%), Positives = 453/543 (83%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDXX-XXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NAD QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
>WB|WBGene00000160 [details] [associations]
symbol:apb-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0002119 GO:GO:0008565 GO:GO:0000003
HOGENOM:HOG000163270 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:FO081557 UniGene:Cel.22457
GeneID:175376 KEGG:cel:CELE_Y71H2B.10 UCSC:Y71H2B.10a CTD:175376
NextBio:887890 RefSeq:NP_001022937.1 ProteinModelPortal:Q9N4F3
SMR:Q9N4F3 DIP:DIP-27411N IntAct:Q9N4F3 MINT:MINT-116366
STRING:Q9N4F3 PRIDE:Q9N4F3 EnsemblMetazoa:Y71H2B.10a.1
EnsemblMetazoa:Y71H2B.10a.2 WormBase:Y71H2B.10a InParanoid:Q9N4F3
ArrayExpress:Q9N4F3 Uniprot:Q9N4F3
Length = 955
Score = 1914 (678.8 bits), Expect = 1.1e-197, P = 1.1e-197
Identities = 388/648 (59%), Positives = 474/648 (73%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+N+ELKKLVYLYL+NYAKSQPDLAI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNVELKKLVYLYLMNYAKSQPDLAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRV+KITEYLCDPL+RC+KD+DPYVRKTAA+CVAKL+D+N LV+++G
Sbjct: 101 LIRALAVRTMGCIRVEKITEYLCDPLRRCMKDEDPYVRKTAAVCVAKLHDMNPALVKEQG 160
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
F+E L DL+SD + + E+ S ++KLLTALNECTEWGQVF
Sbjct: 161 FVELLNDLLSDANPMVVANAVAALTEMN--EQQTVIEVNSQMVNKLLTALNECTEWGQVF 218
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNLC 239
ILDAL+ Y D RE +NI ER++PRL HAN AVVLS VK++++ ++++ + +D + L
Sbjct: 219 ILDALAGYTPRDERETQNICERISPRLAHANAAVVLSTVKVLMKLIDMMPADSDFITQLT 278
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
KK+APP+VTLLSAEPEIQYVALRNINLIVQ+RP IL E+KVFF KYNDPIYVKMEKL+I
Sbjct: 279 KKLAPPMVTLLSAEPEIQYVALRNINLIVQKRPDILKQEMKVFFVKYNDPIYVKMEKLDI 338
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
MI+LA NI QVL E KEYATEVDVDFVRK+VRAIGRCAIK+E ++ERC+ LLELI+
Sbjct: 339 MIRLAQQNNIAQVLSELKEYATEVDVDFVRKSVRAIGRCAIKVEASSERCVQTLLELIQT 398
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
KVNYVVQEA++VIKDIFR+YPN YESII+ LCE+LDTLDEPEA+ASMIWIIGEYAERIDN
Sbjct: 399 KVNYVVQEAVVVIKDIFRKYPNRYESIISALCENLDTLDEPEARASMIWIIGEYAERIDN 458
Query: 420 ADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLR 479
AD QVQLQLLTA VKLFLK+P Q ++Q VL+ AT ++DNPDLR
Sbjct: 459 ADELLESFVEGFHDENTQVQLQLLTAVVKLFLKRPGVA-QALVQRVLSLATQDSDNPDLR 517
Query: 480 DRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEA 539
DR +IYWRLLS DP AAK+VVL EKP+IS++++ L+PSLL++L+ +I TL+SVYHKPP A
Sbjct: 518 DRGFIYWRLLSADPAAAKNVVLTEKPLISEETDLLEPSLLEQLVCHIGTLASVYHKPPSA 577
Query: 540 FVTRVKTT-------------ASRTDDEDYPNGSEQGYSDAPTHVA--DEGASPQTSSSN 584
F+ K +S D PN + G + APT + D+ + S
Sbjct: 578 FIDPAKAPLRQINPIPAAKFGSSLLDTSSTPNAARNGSAAAPTVIPSQDQVIADLLSLDL 637
Query: 585 XXXXXXXXXXXXXXXXXXXXXXDLLGDLIGLDNSAA-IVPADQAAASP 631
L DL+GL P + A+ +P
Sbjct: 638 NAPAASANTGAFGGAMSGTTSMGGLDDLLGLGGDPMPAAPTNSASYNP 685
>UNIPROTKB|Q7Z451 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 EMBL:CH471147 UniGene:Hs.514819
HGNC:HGNC:563 ChiTaRS:AP2B1 EMBL:AC015911 EMBL:AC004134
EMBL:AY341427 IPI:IPI00790702 SMR:Q7Z451 STRING:Q7Z451
Ensembl:ENST00000538556 Uniprot:Q7Z451
Length = 880
Score = 1868 (662.6 bits), Expect = 6.9e-195, Sum P(2) = 6.9e-195
Identities = 361/526 (68%), Positives = 437/526 (83%)
Query: 18 MQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDK 77
MQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNPLIRALAVRTMGCIRVDK
Sbjct: 1 MQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK 60
Query: 78 ITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDXX-XXX 136
ITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+GFL+SL+DLI+D
Sbjct: 61 ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVV 120
Query: 137 XXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREA 196
+ + ++ ++KLLTALNECTEWGQ+FILD LS Y D REA
Sbjct: 121 ANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREA 180
Query: 197 ENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNLCKKMAPPLVTLLSAEPE 255
++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L KK+APPLVTLLS EPE
Sbjct: 181 QSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPE 240
Query: 256 IQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLE 315
+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+IMI+LAS NI QVL E
Sbjct: 241 VQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAE 300
Query: 316 FKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDI 375
KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+ KVNYVVQEAI+VI+DI
Sbjct: 301 LKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDI 360
Query: 376 FRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXX 435
FR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERIDNAD
Sbjct: 361 FRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDES 420
Query: 436 AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 495
QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDLRDR YIYWRLLSTDP
Sbjct: 421 TQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVT 479
Query: 496 AKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFV 541
AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP AFV
Sbjct: 480 AKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFV 525
Score = 42 (19.8 bits), Expect = 6.9e-195, Sum P(2) = 6.9e-195
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 569 DLLGDLLNLD 578
>GENEDB_PFALCIPARUM|PFE1400c [details] [associations]
symbol:PFE1400c "beta adaptin protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016192 "vesicle-mediated
transport" evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 HOGENOM:HOG000163270 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:AL844504
RefSeq:XP_001351835.2 ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6
MINT:MINT-1744951 PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA
GeneID:813094 KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 1712 (607.7 bits), Expect = 2.8e-176, P = 2.8e-176
Identities = 331/570 (58%), Positives = 435/570 (76%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF+DVVNCMQT N+ELKKLVYLY+INYAK QP+LAILAVNTF KDS DPNP
Sbjct: 41 MTVGKDVSTLFSDVVNCMQTSNIELKKLVYLYVINYAKVQPELAILAVNTFRKDSSDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALA+RTMGCIR+++ITEYL +PL+RCLKD+DPYVRKTA IC+AKLYDI+ +LVE+ G
Sbjct: 101 LIRALAIRTMGCIRLEQITEYLIEPLRRCLKDEDPYVRKTAVICIAKLYDISPKLVEEEG 160
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEIT----SHTLSKLLTALNECTEW 176
F+++L D++ D S++ I + + ++KLL A+NEC EW
Sbjct: 161 FIDTLLDILDDNNAMVVANAVISLTDICENSNKSILKDVINKDENNVNKLLNAINECVEW 220
Query: 177 GQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVR 236
GQVFILDAL Y+ +++AE ++ER+ PRL HAN AVVLS++K+IL ++ I + ++
Sbjct: 221 GQVFILDALVLYEPKTSKDAERVLERILPRLSHANSAVVLSSIKVILCLLDKINDKEFIK 280
Query: 237 NLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEK 296
N+ KK++P LVTLLSAEPEIQY+ALRNINLI Q+ P +L+ +I +FFCKYN+P YVKMEK
Sbjct: 281 NVHKKLSPSLVTLLSAEPEIQYIALRNINLITQKLPNMLSDKINMFFCKYNEPAYVKMEK 340
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLEL 356
L+I+I+L SD+N+D VL E KEY+TEVDV+FV+K+VRAIG CAIKL +++E+CI++LL+L
Sbjct: 341 LDIIIRLVSDKNVDLVLYELKEYSTEVDVEFVKKSVRAIGSCAIKLPQSSEKCINILLDL 400
Query: 357 IKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAER 416
I K+NYV+QE I+VIKDIFR+YPN YESII LCE+L++LDE AKAS+IWIIGEY ER
Sbjct: 401 IDTKINYVIQECIVVIKDIFRKYPNKYESIITILCENLESLDESNAKASLIWIIGEYVER 460
Query: 417 IDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNP 476
IDNAD VQLQ+LTA+VKLFLK ++ + +I VL +T E+DNP
Sbjct: 461 IDNADELIDSFLENFSDEPYNVQLQILTASVKLFLKC-SKNTKDIITKVLKLSTEESDNP 519
Query: 477 DLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKP 536
DLRDRAYIYWRLLS + + AK +VLA+KP I +++ D +L++L+ NI+ LSSVYHK
Sbjct: 520 DLRDRAYIYWRLLSKNIDVAKKIVLADKPPIQEENKITDTKVLNKLIKNISMLSSVYHKL 579
Query: 537 PEAFVTRVKTTASRTDDEDYPNGSEQGYSD 566
PE F+++ K + S D + + + Y D
Sbjct: 580 PETFISK-KNSYSLNSDNNNDHMQDDHYDD 608
>UNIPROTKB|Q8I3I6 [details] [associations]
symbol:PFE1400c "Beta adaptin protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AL844504 RefSeq:XP_001351835.2
ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6 MINT:MINT-1744951
PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA GeneID:813094
KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 1712 (607.7 bits), Expect = 2.8e-176, P = 2.8e-176
Identities = 331/570 (58%), Positives = 435/570 (76%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF+DVVNCMQT N+ELKKLVYLY+INYAK QP+LAILAVNTF KDS DPNP
Sbjct: 41 MTVGKDVSTLFSDVVNCMQTSNIELKKLVYLYVINYAKVQPELAILAVNTFRKDSSDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALA+RTMGCIR+++ITEYL +PL+RCLKD+DPYVRKTA IC+AKLYDI+ +LVE+ G
Sbjct: 101 LIRALAIRTMGCIRLEQITEYLIEPLRRCLKDEDPYVRKTAVICIAKLYDISPKLVEEEG 160
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEIT----SHTLSKLLTALNECTEW 176
F+++L D++ D S++ I + + ++KLL A+NEC EW
Sbjct: 161 FIDTLLDILDDNNAMVVANAVISLTDICENSNKSILKDVINKDENNVNKLLNAINECVEW 220
Query: 177 GQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVR 236
GQVFILDAL Y+ +++AE ++ER+ PRL HAN AVVLS++K+IL ++ I + ++
Sbjct: 221 GQVFILDALVLYEPKTSKDAERVLERILPRLSHANSAVVLSSIKVILCLLDKINDKEFIK 280
Query: 237 NLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEK 296
N+ KK++P LVTLLSAEPEIQY+ALRNINLI Q+ P +L+ +I +FFCKYN+P YVKMEK
Sbjct: 281 NVHKKLSPSLVTLLSAEPEIQYIALRNINLITQKLPNMLSDKINMFFCKYNEPAYVKMEK 340
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLEL 356
L+I+I+L SD+N+D VL E KEY+TEVDV+FV+K+VRAIG CAIKL +++E+CI++LL+L
Sbjct: 341 LDIIIRLVSDKNVDLVLYELKEYSTEVDVEFVKKSVRAIGSCAIKLPQSSEKCINILLDL 400
Query: 357 IKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAER 416
I K+NYV+QE I+VIKDIFR+YPN YESII LCE+L++LDE AKAS+IWIIGEY ER
Sbjct: 401 IDTKINYVIQECIVVIKDIFRKYPNKYESIITILCENLESLDESNAKASLIWIIGEYVER 460
Query: 417 IDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNP 476
IDNAD VQLQ+LTA+VKLFLK ++ + +I VL +T E+DNP
Sbjct: 461 IDNADELIDSFLENFSDEPYNVQLQILTASVKLFLKC-SKNTKDIITKVLKLSTEESDNP 519
Query: 477 DLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKP 536
DLRDRAYIYWRLLS + + AK +VLA+KP I +++ D +L++L+ NI+ LSSVYHK
Sbjct: 520 DLRDRAYIYWRLLSKNIDVAKKIVLADKPPIQEENKITDTKVLNKLIKNISMLSSVYHKL 579
Query: 537 PEAFVTRVKTTASRTDDEDYPNGSEQGYSD 566
PE F+++ K + S D + + + Y D
Sbjct: 580 PETFISK-KNSYSLNSDNNNDHMQDDHYDD 608
>UNIPROTKB|G4N974 [details] [associations]
symbol:MGG_03320 "AP-1 complex subunit beta-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
GO:GO:0043581 PANTHER:PTHR11134 EMBL:CM001234 RefSeq:XP_003716637.1
ProteinModelPortal:G4N974 SMR:G4N974 EnsemblFungi:MGG_03320T0
GeneID:2676863 KEGG:mgr:MGG_03320 Uniprot:G4N974
Length = 738
Score = 1621 (575.7 bits), Expect = 2.4e-168, Sum P(2) = 2.4e-168
Identities = 317/588 (53%), Positives = 425/588 (72%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+GKDVS+LF DV+ + T +L+ KKLVYLYL+NYAKS PDL ILAVNTFV+DS+DPNP
Sbjct: 45 MTLGKDVSALFPDVLKNIATADLDQKKLVYLYLMNYAKSHPDLCILAVNTFVQDSEDPNP 104
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALA+RTMGCIRVDK+ +Y+ +PL++ L+D+ PYVRKTAAICVAKL+D+N + + G
Sbjct: 105 LIRALAIRTMGCIRVDKMVDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLNPTMCIENG 164
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRP-IFEITSHTLSKLLTALNECTEWGQV 179
FLE+L++LI D + IT TL KLL ALNECTEWG+V
Sbjct: 165 FLETLQELIGDPNPMVVANSVQALSEIAETAPETRALVITPATLKKLLMALNECTEWGRV 224
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
IL L+ Y +D +E+E++ ERV P+ QH N +VVL+AVK++ M++I + D VR
Sbjct: 225 TILSTLADYPPSDVKESEHVCERVAPQFQHVNPSVVLAAVKVVFIHMKVI-NPDSVRQYL 283
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
KKMAPPLVTL+++ PE+QYVALRNI+L++Q +P IL+ E++VFFCKYNDP YVKM+KLEI
Sbjct: 284 KKMAPPLVTLVASAPEVQYVALRNIDLLLQAKPDILSKELRVFFCKYNDPPYVKMQKLEI 343
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
M+++A+D+N +Q+L E KEYA EVD+DFVR+AV+AIG+ AIK+E A+E+C++ LL+L+
Sbjct: 344 MVRIANDKNFEQLLAELKEYALEVDMDFVRRAVKAIGQVAIKIESASEKCVNALLDLMAT 403
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
KVNYVVQE ++VIKDI R+YP YE +I TLCE +D LDEP A+ S+IWI+GEYAE+I N
Sbjct: 404 KVNYVVQEVVVVIKDILRKYPG-YEGVIPTLCEHIDELDEPNARGSLIWIVGEYAEKISN 462
Query: 420 ADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLR 479
AD Q QLQ+LTA VKLFLKKP+ Q ++Q VL AT + DNPD+R
Sbjct: 463 ADEIISTFVDGFMEEFTQTQLQILTAAVKLFLKKPSNN-QGLVQKVLQQATADNDNPDIR 521
Query: 480 DRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEA 539
DRAY+YWRLLS D + AK+++ ++KP I+ L SLL++LL ++TL+SVYHKPPE+
Sbjct: 522 DRAYVYWRLLSGDLDIAKNIITSQKPAITTTMTSLPSSLLEQLLTELSTLASVYHKPPES 581
Query: 540 FVTRVKTTAS---RTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSN 584
FV + + A R ++ + + A A GA PQ++ N
Sbjct: 582 FVGKGRFGADAIQRAAIQEQRRDAAENPIAAAVAAAANGAPPQSNVEN 629
Score = 38 (18.4 bits), Expect = 2.4e-168, Sum P(2) = 2.4e-168
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 607 DLLGDLIGLD--NSAAIVPADQ 626
D++G GLD S+A PA Q
Sbjct: 695 DIMGGFAGLDMGGSSAPPPATQ 716
>ASPGD|ASPL0000034670 [details] [associations]
symbol:AN3029 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
EMBL:BN001306 EMBL:AACD01000051 eggNOG:COG5096 HOGENOM:HOG000163270
PANTHER:PTHR11134 OMA:KECENAD OrthoDB:EOG49GPQW RefSeq:XP_660633.1
ProteinModelPortal:Q5B8V1 SMR:Q5B8V1 STRING:Q5B8V1
EnsemblFungi:CADANIAT00010050 GeneID:2873851 KEGG:ani:AN3029.2
Uniprot:Q5B8V1
Length = 766
Score = 1310 (466.2 bits), Expect = 2.4e-166, Sum P(2) = 2.4e-166
Identities = 251/421 (59%), Positives = 327/421 (77%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+GKDVS+LF DV+ + T +LE KKLVYLYL+NYAKS PDL ILAVNTFV+DS+DPNP
Sbjct: 44 MTLGKDVSALFPDVLKNIATSDLEQKKLVYLYLMNYAKSHPDLCILAVNTFVQDSEDPNP 103
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALA+RTMGCIRVDK+ +Y+ +PL++ L+D+ PYVRKTAAICVAKL+D+ + + G
Sbjct: 104 LIRALAIRTMGCIRVDKMIDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLGPAMCLENG 163
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRP-IFEITSHTLSKLLTALNECTEWGQV 179
FLE L+++I D + ++T +TL KLL ALNECTEWG+V
Sbjct: 164 FLEMLQEMIGDPNPMVVANSVTALSEIHHAAPETQALQVTPNTLRKLLMALNECTEWGRV 223
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
IL LS Y+ + EAE I ERV P+ QHAN +VVL+AVK + M++I + ++ +N
Sbjct: 224 TILTTLSEYRTSAVNEAEQICERVAPQFQHANPSVVLAAVKTVFLHMKIINA-ELSKNYL 282
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
KKMAPPLVTL+S+ PE+QYVALRNI+L++Q++P IL E++VFFCKYNDP YVK +KLEI
Sbjct: 283 KKMAPPLVTLVSSAPEVQYVALRNIDLLLQKQPDILNKELRVFFCKYNDPPYVKFQKLEI 342
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
M+++A+DRN DQ+L E +EYA EVD+DFVR+AV+AIG+ AIK+E A E+C++ LL+LI
Sbjct: 343 MVRIANDRNFDQLLAELREYALEVDMDFVRRAVKAIGQVAIKIESACEKCVNTLLDLINT 402
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
KVNYVVQEAI+VIKDIFR+YP YE II TLC+ +D LDEP A+A++IWI+GEYAE+I N
Sbjct: 403 KVNYVVQEAIVVIKDIFRKYPG-YEGIIPTLCKCIDELDEPNARAALIWIVGEYAEKISN 461
Query: 420 A 420
A
Sbjct: 462 A 462
Score = 330 (121.2 bits), Expect = 2.4e-166, Sum P(2) = 2.4e-166
Identities = 71/153 (46%), Positives = 99/153 (64%)
Query: 437 QVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLS--TDPE 494
Q QLQ+LTA VKLFLK+P + Q ++Q VL AT E DNPD+RDRAY+YWRLLS +DP+
Sbjct: 498 QTQLQILTAVVKLFLKRPDKA-QGLVQKVLQAATAENDNPDVRDRAYVYWRLLSNTSDPD 556
Query: 495 AAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRTD-- 552
AA+++VL++KP I + L P+LL++LL ++TL+SVYH PPE FV + + A
Sbjct: 557 AARNIVLSKKPPIVTTIHSLPPALLEQLLTELSTLASVYHMPPEQFVGQGRFGADAVQKA 616
Query: 553 --DEDYPNGSEQGYSDAPTHVADEGASPQTSSS 583
+E N E + A D A+PQ ++
Sbjct: 617 AIEEQLQNARENPLAAAAAAAVDGTAAPQQQNN 649
>UNIPROTKB|K7EJT8 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000592545 Uniprot:K7EJT8
Length = 913
Score = 1527 (542.6 bits), Expect = 7.7e-159, Sum P(2) = 7.7e-159
Identities = 298/454 (65%), Positives = 366/454 (80%)
Query: 90 LKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDXX-XXXXXXXXXXXXXXX 148
+KD+DPYVRKTAA+CVAKL+DINA++VED+GFL+SL+DLI+D
Sbjct: 92 VKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 151
Query: 149 XXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQ 208
+ + ++ ++KLLTALNECTEWGQ+FILD LS Y D REA++I ERVTPRL
Sbjct: 152 SHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLS 211
Query: 209 HANCAVVLSAVKMILQQMELITS-TDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLI 267
HAN AVVLSAVK++++ +EL+ +D L KK+APPLVTLLS EPE+QYVALRNINLI
Sbjct: 212 HANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLI 271
Query: 268 VQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDF 327
VQ+RP IL EIKVFF KYNDPIYVK+EKL+IMI+LAS NI QVL E KEYATEVDVDF
Sbjct: 272 VQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDF 331
Query: 328 VRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESII 387
VRKAVRAIGRCAIK+E++AERC+S LL+LI+ KVNYVVQEAI+VI+DIFR+YPN YESII
Sbjct: 332 VRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESII 391
Query: 388 ATLCESLDTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATV 447
ATLCE+LD+LDEP+A+A+MIWI+GEYAERIDNAD QVQL LLTA V
Sbjct: 392 ATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIV 451
Query: 448 KLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVI 507
KLFLKKP+E Q+++Q VL+ AT ++DNPDLRDR YIYWRLLSTDP AK+VVL+EKP+I
Sbjct: 452 KLFLKKPSE-TQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLI 510
Query: 508 SDDSNQLDPSLLDELLANIATLSSVYHKPPEAFV 541
S++++ ++P+LLDEL+ +I +L+SVYHKPP AFV
Sbjct: 511 SEETDLIEPTLLDELICHIGSLASVYHKPPNAFV 544
Score = 269 (99.8 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 61/123 (49%), Positives = 83/123 (67%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +P
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDE---DP 97
Query: 61 LIR---ALAVRTMGCIRVDKITEY-LCDPLQRCLKDDDPYVRKTAAICVAKLYDI--NAE 114
+R A+ V + I + + D L+ + D +P V A ++++ + N+
Sbjct: 98 YVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSN 157
Query: 115 LVE 117
L++
Sbjct: 158 LLD 160
Score = 52 (23.4 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 50/221 (22%), Positives = 87/221 (39%)
Query: 355 ELIK--IKVNYVVQEAIIVIK----DIFRRYPN--TYESIIATLCESLDTLDEPEAKASM 406
E++K IKV +V I +K DI R + ++A L E +D + +
Sbjct: 277 EILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKA- 335
Query: 407 IWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVK-LFLKKPTEGPQQMIQVV 465
+ IG A +++ + +Q ++ +F K P + + +I +
Sbjct: 336 VRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKY-ESIIATL 394
Query: 466 LNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLAN 525
N D PD R A + W + E A+ + A++ + S D S +L
Sbjct: 395 CENLD-SLDEPDAR--AAMIWIV----GEYAERIDNADELLESFLEGFHDESTQVQLTLL 447
Query: 526 IATLSSVYHKPPEA--FVTRVKTTASRTDDEDYPNGSEQGY 564
A + KP E V +V + A T D D P+ ++GY
Sbjct: 448 TAIVKLFLKKPSETQELVQQVLSLA--TQDSDNPDLRDRGY 486
Score = 42 (19.8 bits), Expect = 7.7e-159, Sum P(2) = 7.7e-159
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 588 DLLGDLLNLD 597
>UNIPROTKB|G4NIQ6 [details] [associations]
symbol:MGG_04150 "AP-2 complex subunit beta" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
PANTHER:PTHR11134 EMBL:CM001236 RefSeq:XP_003719679.1
EnsemblFungi:MGG_04150T0 GeneID:2677629 KEGG:mgr:MGG_04150
Uniprot:G4NIQ6
Length = 724
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 280/537 (52%), Positives = 379/537 (70%)
Query: 1 MTVGK-DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPN 59
MT+ D+ +LF DV+ CM E+LE+KK+ +L+L+NYA+ +P++AI A+ D +D N
Sbjct: 48 MTMSNNDMVALFPDVIGCMHIESLEIKKMCFLFLVNYARMRPEIAIKAIPVLEYDMRDSN 107
Query: 60 PLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDR 119
PL+RALA+RTM I V + E +++ LKD DPYVRKTAA CVAKLYD + ++VE
Sbjct: 108 PLVRALALRTMSYIHVREFVEATVPIVKQMLKDSDPYVRKTAAFCVAKLYDHDKQMVEQS 167
Query: 120 GFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
++ L L+ D S I SK++ L +C+EWGQ
Sbjct: 168 DLIDRLNGLLRDDNPTVVASALASLMDIWERSDAIKLTIDYGNASKMVAILPDCSEWGQT 227
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
+IL+AL Y D+ EA + ER+ PRL H+N AVVL+ +++IL M I+ + LC
Sbjct: 228 YILEALMSYLPVDSGEALLLAERIAPRLSHSNSAVVLTCIRVILYLMNYISDQKQISALC 287
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
+K++PPLVTLL+ PE+QY+ALRN LI+QRRP +L ++I+VFFCKYNDPIYVK+ KLE+
Sbjct: 288 RKLSPPLVTLLAKGPEVQYLALRNALLILQRRPEVLRNDIRVFFCKYNDPIYVKVTKLEL 347
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
+ LA++RNID+VL E +EYATE+DV FVRKAVRAIG+ AIK+E AA RCI +LLEL+
Sbjct: 348 IFMLANERNIDEVLTELREYATEIDVHFVRKAVRAIGKLAIKIEPAAPRCIDLLLELVAT 407
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
KV Y+VQEA +VI++IFR+YPN YESII TLCE LD+LDEPEAKA+M+W+IG+YA RI+N
Sbjct: 408 KVTYIVQEATVVIRNIFRKYPNQYESIIGTLCEHLDSLDEPEAKAAMVWVIGQYASRIEN 467
Query: 420 ADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLR 479
+D +VQL LLTATVKLF+++PT+G Q+++ VL AT ETDNPDLR
Sbjct: 468 SDALLEDFLYSFADEPVEVQLALLTATVKLFIQRPTKG-QELVPKVLKWATEETDNPDLR 526
Query: 480 DRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKP 536
DRAY+YWRLLSTD AK +V+ EKP I+ +S +LDP+ L+E+ N+ TL++VY KP
Sbjct: 527 DRAYMYWRLLSTDIAMAKQIVMGEKPPITAESERLDPATLEEMCLNVGTLATVYLKP 583
>ASPGD|ASPL0000003399 [details] [associations]
symbol:AN5950 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0044732 "mitotic spindle
pole body" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 EMBL:BN001301 PANTHER:PTHR11134 OMA:VLKWATE
ProteinModelPortal:C8V3G8 EnsemblFungi:CADANIAT00007077
Uniprot:C8V3G8
Length = 717
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 261/547 (47%), Positives = 370/547 (67%)
Query: 1 MTVGK-DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPN 59
MT+ D+ +LF DV++CM +LE+KK+ +L+L+NY++ +PD+A+ A+ + D + N
Sbjct: 47 MTMSNNDMIALFPDVIDCMNLPSLEIKKMCFLFLVNYSRMKPDIALKALPILINDMEATN 106
Query: 60 PLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDR 119
PL+RALA+RT+ I V + E PL+R + D DPYVRKTAA CVAKLY+ + ++VE
Sbjct: 107 PLVRALALRTIAYIHVREYVEATVQPLKRLMGDMDPYVRKTAAFCVAKLYEHDRKMVEAS 166
Query: 120 GFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
++ L ++ D S I + SKL++ L +C+EWGQ
Sbjct: 167 DLIDRLNAMLKDENPTVVSSVLASLVDIWGRSETISLTIDYASASKLVSILPDCSEWGQS 226
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
+IL+AL Y D+ EA + ER+ PRL H N AVVL+++++IL M I + +L
Sbjct: 227 YILEALMSYVPQDSAEALLLAERIAPRLSHQNSAVVLTSIRVILYLMNYIAEERHLTSLS 286
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
KK++PPLVTLLS PE+QY+ LRN LI+Q+RP +L ++I+VFFC YNDPIYVK+ KLE+
Sbjct: 287 KKLSPPLVTLLSKPPEVQYLVLRNAILILQKRPEVLRNDIRVFFCNYNDPIYVKVTKLEL 346
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
+ L + NI VL E +EYATE+DV FVRKAVRAIG+ AIK+E AA++CI LL+L+
Sbjct: 347 IFMLTTKENISVVLAELREYATEIDVHFVRKAVRAIGKLAIKIESAAKQCIDCLLDLVNA 406
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
K+ Y+VQEA +VI++IFR+YPN YESII + +++D LDEPEAKA++IWIIG+YA+RI+N
Sbjct: 407 KIPYIVQEATVVIRNIFRKYPNQYESIIGQVIQNIDDLDEPEAKAAVIWIIGQYADRIEN 466
Query: 420 ADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLR 479
+ +VQL LLTATVKLF+++PT+ QQ++ VL T ETD+PDLR
Sbjct: 467 SADLLQDYLATFHDETIEVQLSLLTATVKLFIQRPTKA-QQLVPQVLKWCTEETDDPDLR 525
Query: 480 DRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEA 539
DR Y+YWRLLS+DP A+ VV+ +KP IS +S +LD L+EL N+ TL++VY KP +
Sbjct: 526 DRGYMYWRLLSSDPTTARQVVMGQKPPISAESEKLDNRTLEELCLNVGTLATVYLKPVQQ 585
Query: 540 FVTRVKT 546
+T
Sbjct: 586 VFRSART 592
>POMBASE|SPBC947.02 [details] [associations]
symbol:apl2 "AP-1 adaptor complex subunit beta subunit
Apl2" species:4896 "Schizosaccharomyces pombe" [GO:0005768
"endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006995 "cellular response to
nitrogen starvation" evidence=IMP] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016197 "endosomal transport" evidence=IMP]
[GO:0030121 "AP-1 adaptor complex" evidence=IDA] [GO:0030276
"clathrin binding" evidence=IC] [GO:0070317 "negative regulation of
G0 to G1 transition" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 PomBase:SPBC947.02 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0070317 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005768
EMBL:CU329671 GO:GO:0005905 GenomeReviews:CU329671_GR GO:GO:0016197
GO:GO:0030121 GO:GO:0030276 eggNOG:COG5096 HOGENOM:HOG000163270
PANTHER:PTHR11134 PIR:T40780 RefSeq:NP_595274.1
ProteinModelPortal:O43079 STRING:O43079 EnsemblFungi:SPBC947.02.1
GeneID:2541255 KEGG:spo:SPBC947.02 OMA:KECENAD OrthoDB:EOG49GPQW
NextBio:20802367 GO:GO:0006995 Uniprot:O43079
Length = 683
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 264/580 (45%), Positives = 378/580 (65%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DV+ + T ++ LKKLVYLYLINYAK+ PDL ILAVNTFVKDS++ NP
Sbjct: 45 MTVGKDVSSLFPDVLKNLATRDITLKKLVYLYLINYAKTHPDLCILAVNTFVKDSEEYNP 104
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+RALA+RTMGCIRV+KI YL DPL++ LKD+ PYVRK AA+CV K+YD++ E G
Sbjct: 105 TLRALAIRTMGCIRVNKIIGYLADPLRKALKDEHPYVRKAAAVCVVKMYDLDREYCASNG 164
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
F+E L+ L+SD + F + +L+ AL+EC EWG++
Sbjct: 165 FIEQLQALVSDPNPVVVANAVRSLAEIHDQDPEKGYFNVVYTMTDRLMVALSECNEWGRI 224
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
IL++L+R++ +D +EAE + ERV P+ QHAN VVLSAVK+I+ + L +S D L
Sbjct: 225 TILNSLARFRTSDIKEAEYVCERVVPQFQHANSGVVLSAVKVIMVHIPLFSS-DFTDFLY 283
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
KKMAPPL+TLLS + EIQYVALRNINLI+Q+RP+I + +VFFCKYNDP+Y+KMEKL+I
Sbjct: 284 KKMAPPLLTLLSTDSEIQYVALRNINLILQKRPSIFDVKTRVFFCKYNDPLYIKMEKLKI 343
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
+ LA D NI++ + E + Y +EV+++FV++ ++ +G A+K+ CIS+ LE+ ++
Sbjct: 344 ITMLACDENINETISELRAYVSEVELEFVKQTIKCLGDVALKVPSVINDCISIFLEIYEL 403
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
++Y+VQE +V++ + R+YP + ++ L ++ L +P A++SM WI+GE++ I
Sbjct: 404 NISYMVQEVTVVMETVLRKYPQKIDLLLPYLSRVIEELGDPRARSSMAWILGEFSHVIPT 463
Query: 420 ADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLR 479
+ Q+QL LLTA VKL L ++++Q VLN A ++ N DLR
Sbjct: 464 SSKLLSEMISTMADEDLQIQLALLTAVVKLSLMNGKGNDEELVQKVLNYAINQSSNQDLR 523
Query: 480 DRAYIYWRLLSTDP-EAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
DRA+ Y RLL+ + A+ +V EKP +S ++N L +LLD LL I TL+SVYHK PE
Sbjct: 524 DRAFAYQRLLTPENVRKAQKIVCCEKPSVSYNNN-LPEALLDALLCEITTLASVYHKLPE 582
Query: 539 AFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVA-DEGAS 577
+F+ + K A E +A H A ++GA+
Sbjct: 583 SFIGQGKFGADAIQRRAV---EELNIEEANVHEAIEKGAN 619
>POMBASE|SPBC2G2.06c [details] [associations]
symbol:apl1 "AP-2 adaptor complex subunit Apl1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISO] [GO:0030122
"AP-2 adaptor complex" evidence=ISO] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 PomBase:SPBC2G2.06c GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0044732 GO:GO:0008565 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0030122 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 PIR:T40145
RefSeq:NP_596435.1 ProteinModelPortal:O43005 STRING:O43005
EnsemblFungi:SPBC2G2.06c.1 GeneID:2540375 KEGG:spo:SPBC2G2.06c
OMA:VLKWATE OrthoDB:EOG476P7N NextBio:20801503 Uniprot:O43005
Length = 677
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 245/544 (45%), Positives = 349/544 (64%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G D+SSLF V++ M++ NLELKKL YLYL YA +P A AV + D NP
Sbjct: 42 ISYGYDMSSLFPSVISSMESNNLELKKLCYLYLKIYASVKPTEAKRAVKLILNDIYSSNP 101
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR+LA+RT+ + + DP+ R L D DPYVRKTAAI +AKLY + ++VE G
Sbjct: 102 MIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKTAAIGIAKLYSYDKKMVESSG 161
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEIT-SHTLS-KLLTALNECTEWGQ 178
++ LK+++SD S+ F++T S +S KL+ +L +C+EW Q
Sbjct: 162 LIDHLKEMLSDESSVVVANSLAALMNIVNSSTG--FKLTFSREISNKLVKSLTDCSEWLQ 219
Query: 179 VFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNL 238
V ILDAL Y EAE+ ER++P LQH N AV + AVK+IL + + V+
Sbjct: 220 VAILDALIFYVPQKPGEAESFAERISPWLQHGNAAVCMGAVKVILYLTNYMKDDNRVKEY 279
Query: 239 CKKMAPPLVTLLSAEPEI-QYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKL 297
K PPLVTLL+ + QYV LRNI +I+++ P + A++I F+C ++DPIYVK+EKL
Sbjct: 280 FMKTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFANDIHFFYCNFDDPIYVKLEKL 339
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELI 357
+I+ K+A N+DQ+L EF EYA+E+DV+ VRK+V+ IG AIK+E CI L+EL+
Sbjct: 340 DILTKIADIHNLDQILPEFVEYASEIDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELM 399
Query: 358 KIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERI 417
KV YV+QEA+IVI+DI R+YP +Y+S++ L E+LD+LDEP+AK+++IWI+G+YAE I
Sbjct: 400 NTKVTYVIQEAVIVIRDILRKYPGSYKSLVPILYENLDSLDEPDAKSAVIWILGQYAEEI 459
Query: 418 DNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPD 477
+++ ++QL LLTA +K+FLKKPT M+ VL T E ++PD
Sbjct: 460 EDSITLLNDYLKGFFDEPLEIQLTLLTAVIKVFLKKPTAAAD-MVTNVLQWCTDEVNDPD 518
Query: 478 LRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPP 537
LRDR IY R+LS +PE AK V+LA P ++ + DP ++L+ NI+TLSS+YHKPP
Sbjct: 519 LRDRGIIYSRMLSANPELAKKVILANMPPVNVGTGMYDPDTTEQLMLNISTLSSIYHKPP 578
Query: 538 EAFV 541
FV
Sbjct: 579 NRFV 582
>CGD|CAL0003949 [details] [associations]
symbol:APL2 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005768 "endosome"
evidence=IEA] [GO:0030121 "AP-1 adaptor complex" evidence=IEA]
[GO:0006896 "Golgi to vacuole transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0070317 "negative
regulation of G0 to G1 transition" evidence=IEA] [GO:0030276
"clathrin binding" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003949 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0035690 eggNOG:COG5096
PANTHER:PTHR11134 EMBL:AACQ01000027 RefSeq:XP_719930.1
ProteinModelPortal:Q5AEN7 STRING:Q5AEN7 GeneID:3638343
KEGG:cal:CaO19.231 Uniprot:Q5AEN7
Length = 774
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 249/557 (44%), Positives = 361/557 (64%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DV+ + T +LE KKLVYLYL+NYAK+ P+L ILAVNTFV+D++DPNP
Sbjct: 62 MTVGKDVSSLFPDVLKNIATYDLEQKKLVYLYLMNYAKTNPELCILAVNTFVQDTEDPNP 121
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALA+RTMGCIRV K+ EYL PLQR L D++PYVRKTAAICVAKL+D+N E+ + G
Sbjct: 122 LIRALAIRTMGCIRVAKMVEYLEIPLQRTLADENPYVRKTAAICVAKLFDLNPEMCVEFG 181
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITS---HTLSKLLTALNECTEWG 177
FL+ LK L+SD ++ EI + ++ LL LNECTEWG
Sbjct: 182 FLDELKKLLSDPNPMVVANAINALSEIRDMNTNENLEILAFNREVINSLLLCLNECTEWG 241
Query: 178 QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRN 237
++ IL+ L+ Y ++ EA +I+ RV P+LQH N +VVLS++K IL + I T N
Sbjct: 242 RITILNTLAEYDTDNSEEANHIMGRVIPQLQHVNPSVVLSSIKAILHHLNAIPVTAQRSN 301
Query: 238 LCKKMAPPLVTLLSAE-PEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEK 296
+ KK++ PLV+L+S PE QYV L+NI +I+++ P +L+ E++VFF KY+DP+Y+K+EK
Sbjct: 302 ILKKLSAPLVSLVSTSIPEAQYVGLKNIRIILEKYPNVLSKELRVFFIKYSDPLYLKLEK 361
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLEL 356
LEIMI+LAS++N +L E KEYA E + V KA+++IG AIKL+ +A + I++L E+
Sbjct: 362 LEIMIRLASEQNSALLLGELKEYAMEFEPALVTKAIKSIGSVAIKLQESAVKAINLLHEI 421
Query: 357 IKIKV-NYVVQEAIIVIKDIFRRYPNTYES---IIATLCESLDTLDEPEAKASMIWIIGE 412
I + + ++ E++ V+ +I RRYP + II + ++ L++ EA + IW++GE
Sbjct: 422 IDERGGDLIINESVTVLVNILRRYPGKNDLATLIIPVISNHVNELNKTEALSGYIWLLGE 481
Query: 413 YAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQ------QMIQVVL 466
Y + + +QL +L+ VK+ L+ + G ++Q VL
Sbjct: 482 YPKYFSGLHKKLSDLVDGFLEDDSVLQLNILSTIVKINLELSSNGGSGNSQYSNLLQKVL 541
Query: 467 NNATVETDNPDLRDRAYIYWRLLSTDP--EAAKDVVLAEKPVISDDSNQLDPSLLDELLA 524
AT E +N D+RD+AYIYWRLLS+ + K ++L + P I + P LL+ LL
Sbjct: 542 ELATKECENADVRDKAYIYWRLLSSSSSEDQQKKILLTKLPPIETTISSFSPGLLETLLH 601
Query: 525 NIATLSSVYHKPPEAFV 541
++TLSSVY+KP ++F+
Sbjct: 602 ELSTLSSVYYKPAKSFI 618
>UNIPROTKB|Q5AEN7 [details] [associations]
symbol:APL2 "Potential clathrin-associated protein AP-1
complex component" species:237561 "Candida albicans SC5314"
[GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003949
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0035690
eggNOG:COG5096 PANTHER:PTHR11134 EMBL:AACQ01000027
RefSeq:XP_719930.1 ProteinModelPortal:Q5AEN7 STRING:Q5AEN7
GeneID:3638343 KEGG:cal:CaO19.231 Uniprot:Q5AEN7
Length = 774
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 249/557 (44%), Positives = 361/557 (64%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DV+ + T +LE KKLVYLYL+NYAK+ P+L ILAVNTFV+D++DPNP
Sbjct: 62 MTVGKDVSSLFPDVLKNIATYDLEQKKLVYLYLMNYAKTNPELCILAVNTFVQDTEDPNP 121
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALA+RTMGCIRV K+ EYL PLQR L D++PYVRKTAAICVAKL+D+N E+ + G
Sbjct: 122 LIRALAIRTMGCIRVAKMVEYLEIPLQRTLADENPYVRKTAAICVAKLFDLNPEMCVEFG 181
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITS---HTLSKLLTALNECTEWG 177
FL+ LK L+SD ++ EI + ++ LL LNECTEWG
Sbjct: 182 FLDELKKLLSDPNPMVVANAINALSEIRDMNTNENLEILAFNREVINSLLLCLNECTEWG 241
Query: 178 QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRN 237
++ IL+ L+ Y ++ EA +I+ RV P+LQH N +VVLS++K IL + I T N
Sbjct: 242 RITILNTLAEYDTDNSEEANHIMGRVIPQLQHVNPSVVLSSIKAILHHLNAIPVTAQRSN 301
Query: 238 LCKKMAPPLVTLLSAE-PEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEK 296
+ KK++ PLV+L+S PE QYV L+NI +I+++ P +L+ E++VFF KY+DP+Y+K+EK
Sbjct: 302 ILKKLSAPLVSLVSTSIPEAQYVGLKNIRIILEKYPNVLSKELRVFFIKYSDPLYLKLEK 361
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLEL 356
LEIMI+LAS++N +L E KEYA E + V KA+++IG AIKL+ +A + I++L E+
Sbjct: 362 LEIMIRLASEQNSALLLGELKEYAMEFEPALVTKAIKSIGSVAIKLQESAVKAINLLHEI 421
Query: 357 IKIKV-NYVVQEAIIVIKDIFRRYPNTYES---IIATLCESLDTLDEPEAKASMIWIIGE 412
I + + ++ E++ V+ +I RRYP + II + ++ L++ EA + IW++GE
Sbjct: 422 IDERGGDLIINESVTVLVNILRRYPGKNDLATLIIPVISNHVNELNKTEALSGYIWLLGE 481
Query: 413 YAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQ------QMIQVVL 466
Y + + +QL +L+ VK+ L+ + G ++Q VL
Sbjct: 482 YPKYFSGLHKKLSDLVDGFLEDDSVLQLNILSTIVKINLELSSNGGSGNSQYSNLLQKVL 541
Query: 467 NNATVETDNPDLRDRAYIYWRLLSTDP--EAAKDVVLAEKPVISDDSNQLDPSLLDELLA 524
AT E +N D+RD+AYIYWRLLS+ + K ++L + P I + P LL+ LL
Sbjct: 542 ELATKECENADVRDKAYIYWRLLSSSSSEDQQKKILLTKLPPIETTISSFSPGLLETLLH 601
Query: 525 NIATLSSVYHKPPEAFV 541
++TLSSVY+KP ++F+
Sbjct: 602 ELSTLSSVYYKPAKSFI 618
>SGD|S000001618 [details] [associations]
symbol:APL2 "Beta-adaptin subunit of the clathrin-associated
protein (AP-1) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS;IPI]
[GO:0030276 "clathrin binding" evidence=ISS;IPI] [GO:0030121 "AP-1
adaptor complex" evidence=ISS;IPI] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006896
"Golgi to vacuole transport" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 SGD:S000001618 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0005905 EMBL:BK006944 GO:GO:0030121
GO:GO:0030276 eggNOG:COG5096 HOGENOM:HOG000163270 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 OrthoDB:EOG49GPQW EMBL:Z30212
EMBL:Z28135 PIR:S37964 RefSeq:NP_012787.1 ProteinModelPortal:P36000
SMR:P36000 DIP:DIP-1199N IntAct:P36000 MINT:MINT-404361
STRING:P36000 PaxDb:P36000 PeptideAtlas:P36000 PRIDE:P36000
EnsemblFungi:YKL135C GeneID:853723 KEGG:sce:YKL135C CYGD:YKL135c
OMA:YDISATM NextBio:974749 Genevestigator:P36000 GermOnline:YKL135C
GO:GO:0006896 Uniprot:P36000
Length = 726
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 214/554 (38%), Positives = 332/554 (59%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+GKDVSSLF DV+ + T ++E KKLVYLY++NYA++ P+L ILAVNTF+ D+QDPNP
Sbjct: 54 MTLGKDVSSLFPDVLKNIATIDVEQKKLVYLYVMNYAETHPELCILAVNTFITDAQDPNP 113
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIR +A+RTM IRVDKI EY+ PL+R L DD+ YVRKTA ICVAKL+ +N +L + G
Sbjct: 114 LIRCMAIRTMSMIRVDKILEYIETPLRRTLHDDNAYVRKTAVICVAKLFQLNKDLCVELG 173
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPI---FEITSHTLSKLLTALNECTEWG 177
+E L + + D + I SH +S+ L ALNECTEW
Sbjct: 174 VVEDLVNALDDSNPLVIANATAALIEIHNMDMDAVDLSSLIQSH-VSQFLLALNECTEWA 232
Query: 178 QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELIT-STDVVR 236
++ IL LS Y A D+ EA++I++RVT LQH N AVVL+ +K+I++ + I S++ +
Sbjct: 233 RIIILGTLSEYSAKDSLEAQDIIDRVTAHLQHVNPAVVLATIKVIVRNLPQIEYSSNSL- 291
Query: 237 NLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEK 296
+ K+++ V+L+S PE+QYVAL+NI +I+++ P +L E+++F+ K+NDP+YVK+EK
Sbjct: 292 -IMKRLSSAFVSLMSTPPEMQYVALKNIRIILEKYPELLTKELRIFYVKFNDPLYVKLEK 350
Query: 297 LEIMIKLASDRNIDQ---VLLEFKEYATEVDVDFVRKAVRAIGRCAIKL--ERAAERCIS 351
++I+++L N+ Q +L E KEYA E + +FV +A++A+ + IK E + +
Sbjct: 351 IDILVRLVDPSNLKQCTLLLTELKEYAMEYEPEFVSRAIQALSQLGIKYAQESFVSKVLD 410
Query: 352 VLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPE-------AKA 404
+LLEL++ + + + + I + D+ R P + + +C +T PE AK
Sbjct: 411 ILLELLE-RQDTIKDDCCISLCDLLRHCPGN-DKMAKQVCAVFNTWSNPEVLLQSDIAKC 468
Query: 405 SMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQV 464
+ +W++G++ + + A Q+ LL V+L G M+Q
Sbjct: 469 NYVWLLGQHPNNFSDLESKINIFIENFVQEEALTQMSLLMTIVRLHAT--LTG--SMLQS 524
Query: 465 VLNNATVETDNPDLRDRAYIYWRLLS--TDPEAAKDVVLAEKPVISDDSNQLDPSLLDEL 522
VL AT +T D+RD A +YWR LS + D+ + P+IS+ + P +L++L
Sbjct: 525 VLELATQQTHELDVRDMAMMYWRCLSMPNNESLVNDLCQNKLPMISNTLEKFSPEVLEKL 584
Query: 523 LANIATLSSVYHKP 536
L + T+SS+Y KP
Sbjct: 585 LMELGTISSIYFKP 598
>CGD|CAL0003766 [details] [associations]
symbol:orf19.7212 species:5476 "Candida albicans" [GO:0030447
"filamentous growth" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003766 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0030447 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 EMBL:AACQ01000092
RefSeq:XP_715013.1 ProteinModelPortal:Q59ZX9 STRING:Q59ZX9
GeneID:3643342 KEGG:cal:CaO19.7212 Uniprot:Q59ZX9
Length = 767
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 203/544 (37%), Positives = 313/544 (57%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+V++L D++ M+ ++LE++KL Y+ YA + PD A A+ F + DPNPL+R L
Sbjct: 126 EVTNLMKDIIPLMKIDDLEVRKLCCEYISTYATTNPD-AEDAIPFFSRFHSDPNPLLRVL 184
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
+++TM I + +R D DP VRK+AA ++Y + E G +E L
Sbjct: 185 SLKTMVSINRKEFLNLSITSCKRSFSDKDPDVRKSAAYAAGQIYQHDPARAEREGLIELL 244
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEIT-SH--TLSKLLTALNECTEWGQVFIL 182
+ D S +I +H TL KLL A NE W Q +IL
Sbjct: 245 NQSLYDENSSVISSALASLGTVIENSKTLNLKIDKNHALTLIKLLRATNE---WQQTYIL 301
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV-VRNLCKK 241
+AL Y + EA N++E V P LQH N +VV++A+K+++ + ++ + L K+
Sbjct: 302 NALMSYTPQNEDEALNLIEAVLPSLQHENSSVVMNAIKVVIYYCNYARNPELRLPVLPKR 361
Query: 242 MAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMI 301
+ LV+LLS E Q++ LRN+ L++ R + ++++F+C+++DPIYVK KLEI+
Sbjct: 362 LGTSLVSLLSKPAETQFLVLRNVILLLLGRKEFVHFDVEMFYCRFDDPIYVKDTKLEIIY 421
Query: 302 KLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV 361
LA++ N+ VL E +EYATEVDV RKA+RA G A+KLE AAE+C+ V+ +L+ +
Sbjct: 422 LLANESNVGSVLRELEEYATEVDVSMARKAIRAFGNLAVKLENAAEQCVEVICDLVSNGI 481
Query: 362 NYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNAD 421
+Y+VQE+ IVIK+I R+YP +E I+ L + +DEP+AK + +WI+G+Y + I +
Sbjct: 482 SYIVQESAIVIKNILRKYPGQFEFAISELIKHYKLIDEPDAKTAFVWILGQYCQNIKESK 541
Query: 422 XXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDR 481
VQ LTA K +LK P +G + +I VL AT E DNPD+RDR
Sbjct: 542 SILEDFITSFKDDPLDVQYATLTAVAKYYLKFPEQG-ESVILRVLKWATEEVDNPDIRDR 600
Query: 482 AYIYWRLLSTD----PEA-----AKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSV 532
YIYWRLLS++ P K ++L + PVI+ +++ ++P +L+EL NI TL+S+
Sbjct: 601 GYIYWRLLSSEHASGPNGEFQLNTKKIILNDNPVITSENDNINPVILEELELNIGTLASI 660
Query: 533 YHKP 536
Y KP
Sbjct: 661 YLKP 664
>UNIPROTKB|Q59ZX9 [details] [associations]
symbol:APL1 "Potential clathrin-associated protein AP-2
complex component" species:237561 "Candida albicans SC5314"
[GO:0030447 "filamentous growth" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003766 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0030447 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 EMBL:AACQ01000092
RefSeq:XP_715013.1 ProteinModelPortal:Q59ZX9 STRING:Q59ZX9
GeneID:3643342 KEGG:cal:CaO19.7212 Uniprot:Q59ZX9
Length = 767
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 203/544 (37%), Positives = 313/544 (57%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+V++L D++ M+ ++LE++KL Y+ YA + PD A A+ F + DPNPL+R L
Sbjct: 126 EVTNLMKDIIPLMKIDDLEVRKLCCEYISTYATTNPD-AEDAIPFFSRFHSDPNPLLRVL 184
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
+++TM I + +R D DP VRK+AA ++Y + E G +E L
Sbjct: 185 SLKTMVSINRKEFLNLSITSCKRSFSDKDPDVRKSAAYAAGQIYQHDPARAEREGLIELL 244
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEIT-SH--TLSKLLTALNECTEWGQVFIL 182
+ D S +I +H TL KLL A NE W Q +IL
Sbjct: 245 NQSLYDENSSVISSALASLGTVIENSKTLNLKIDKNHALTLIKLLRATNE---WQQTYIL 301
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV-VRNLCKK 241
+AL Y + EA N++E V P LQH N +VV++A+K+++ + ++ + L K+
Sbjct: 302 NALMSYTPQNEDEALNLIEAVLPSLQHENSSVVMNAIKVVIYYCNYARNPELRLPVLPKR 361
Query: 242 MAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMI 301
+ LV+LLS E Q++ LRN+ L++ R + ++++F+C+++DPIYVK KLEI+
Sbjct: 362 LGTSLVSLLSKPAETQFLVLRNVILLLLGRKEFVHFDVEMFYCRFDDPIYVKDTKLEIIY 421
Query: 302 KLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV 361
LA++ N+ VL E +EYATEVDV RKA+RA G A+KLE AAE+C+ V+ +L+ +
Sbjct: 422 LLANESNVGSVLRELEEYATEVDVSMARKAIRAFGNLAVKLENAAEQCVEVICDLVSNGI 481
Query: 362 NYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNAD 421
+Y+VQE+ IVIK+I R+YP +E I+ L + +DEP+AK + +WI+G+Y + I +
Sbjct: 482 SYIVQESAIVIKNILRKYPGQFEFAISELIKHYKLIDEPDAKTAFVWILGQYCQNIKESK 541
Query: 422 XXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDR 481
VQ LTA K +LK P +G + +I VL AT E DNPD+RDR
Sbjct: 542 SILEDFITSFKDDPLDVQYATLTAVAKYYLKFPEQG-ESVILRVLKWATEEVDNPDIRDR 600
Query: 482 AYIYWRLLSTD----PEA-----AKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSV 532
YIYWRLLS++ P K ++L + PVI+ +++ ++P +L+EL NI TL+S+
Sbjct: 601 GYIYWRLLSSEHASGPNGEFQLNTKKIILNDNPVITSENDNINPVILEELELNIGTLASI 660
Query: 533 YHKP 536
Y KP
Sbjct: 661 YLKP 664
>SGD|S000003765 [details] [associations]
symbol:APL1 "Beta-adaptin" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005905 "coated
pit" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;IC] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030122 "AP-2 adaptor complex"
evidence=IDA] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 SGD:S000003765 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
EMBL:BK006943 GO:GO:0008565 GO:GO:0030122 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 OrthoDB:EOG476P7N
EMBL:M64998 EMBL:X87611 EMBL:Z49505 PIR:S57020 RefSeq:NP_012538.3
RefSeq:NP_012540.3 ProteinModelPortal:P27351 SMR:P27351
DIP:DIP-915N IntAct:P27351 MINT:MINT-504477 STRING:P27351
PaxDb:P27351 PeptideAtlas:P27351 EnsemblFungi:YJR005W GeneID:853461
GeneID:853463 KEGG:sce:YJR005W KEGG:sce:YJR007W CYGD:YJR005w
KO:K03237 OMA:TDIDIQM NextBio:974041 ArrayExpress:P27351
Genevestigator:P27351 GermOnline:YJR005W Uniprot:P27351
Length = 700
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 169/551 (30%), Positives = 294/551 (53%)
Query: 6 DVSSLFTDVVNCMQTEN-LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRA 64
++S LF++++ Q E+ LE+K++ + Y+ +P A A+ + D + + ++
Sbjct: 52 EMSVLFSELLKFWQIEDDLEVKRICHEYIRVIGALKPQQAREALPFIMDDFKSRDEKLQI 111
Query: 65 LAVRTMGCIRVDKITEYLCDPLQRCLKDDDP--YVRKTAAICVAKLYDINAELVEDRGFL 122
+A+RT+ + V ++++ D + + P V +TA + L +I+ E V G
Sbjct: 112 MALRTLVLVPVKELSDQAFDCIISLVNHKSPPEQVTRTAIYALLDLDEIDHERV--LGLS 169
Query: 123 ESLKDLI---SDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
L D++ S ++ F I +L L E EW +
Sbjct: 170 SILHDIVKAQSSSPEVIVAALHTLYSIHEKNANMEPFRIPLELAFDMLELLPELNEWNKA 229
Query: 180 FILDALSRYKAADAR-EAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRN- 237
+L+ L+ + ++E P LQ N VVL+++K I M L+ DV++
Sbjct: 230 TVLEVLTTSVVPQHYLDTHEMIELALPYLQQVNTYVVLNSLKFI---MYLLNYVDVIKET 286
Query: 238 LCKKMAPPLVTLLSAEPEIQYVALRN-INLIVQRRPTILAHEIKVFFCKYNDPIYVKMEK 296
L +K++ ++ LL PE+Q++ LRN I L++ R ++L +I FF +YNDPIY+K K
Sbjct: 287 LAEKLSNSVIALLDKPPELQFLVLRNVILLLLSRESSLLRLDISYFFIEYNDPIYIKDTK 346
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKL-ERAAERCISVLLE 355
LE + LA+ + ++L E ++YAT++D+ RK+VRAIG A+KL E + C++VLL+
Sbjct: 347 LECLYLLANKETLPRILEELEQYATDIDIQMSRKSVRAIGNLAVKLDEDSVHDCVAVLLD 406
Query: 356 LIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAE 415
L++ V+YVVQE I V ++I R+YPN +++ + L + + + EPE+K +MIWII +Y++
Sbjct: 407 LLEFGVDYVVQEIISVFRNILRKYPNNFKANVTELVKHTEVVQEPESKNAMIWIITQYSD 466
Query: 416 RIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
I N +VQ +L + +K F++ PT+ +++ +L +N
Sbjct: 467 VIPNYLELFRVFSSNMFSETLEVQFSILNSAIKFFIRSPTKETEELCMDLLKGCIDHENN 526
Query: 476 PDLRDRAYIYWRLLSTDP----------EAAKDVVLAEKPVISDDSNQLDPSLLDELLAN 525
PDLRD+ +YWRLLS E+ K V+ E P+I + + +LDP++L+EL N
Sbjct: 527 PDLRDKTLMYWRLLSLTKTSRISNAITFESLKSVLDGELPLI-EMNTKLDPTVLEELELN 585
Query: 526 IATLSSVYHKP 536
I T+ S+Y KP
Sbjct: 586 IGTIVSIYLKP 596
>UNIPROTKB|Q9Y6B7 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005215 "transporter activity"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0005215 GO:GO:0005802 eggNOG:COG5096 GO:GO:0030131
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
EMBL:AF092094 EMBL:AB209817 EMBL:AL137856 EMBL:BC014146
IPI:IPI00002150 RefSeq:NP_001240781.1 RefSeq:NP_001240782.1
RefSeq:NP_006585.2 UniGene:Hs.515048 ProteinModelPortal:Q9Y6B7
SMR:Q9Y6B7 DIP:DIP-24209N IntAct:Q9Y6B7 STRING:Q9Y6B7
PhosphoSite:Q9Y6B7 DMDM:126302520 PaxDb:Q9Y6B7 PRIDE:Q9Y6B7
DNASU:10717 Ensembl:ENST00000256658 Ensembl:ENST00000369569
GeneID:10717 KEGG:hsa:10717 UCSC:uc001eeb.3 CTD:10717
GeneCards:GC01M114437 HGNC:HGNC:572 HPA:HPA028162 HPA:HPA028399
HPA:HPA028652 MIM:607245 MIM:614066 neXtProt:NX_Q9Y6B7
Orphanet:280763 PharmGKB:PA24864 HOGENOM:HOG000294128
HOVERGEN:HBG050521 InParanoid:Q9Y6B7 KO:K12401 OMA:RPWKAYL
OrthoDB:EOG48KR9Z PhylomeDB:Q9Y6B7 GenomeRNAi:10717 NextBio:40689
ArrayExpress:Q9Y6B7 Bgee:Q9Y6B7 CleanEx:HS_AP4B1
Genevestigator:Q9Y6B7 GermOnline:ENSG00000134262 Uniprot:Q9Y6B7
Length = 739
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 170/563 (30%), Positives = 286/563 (50%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL +M TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ +VAL ++ I+ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTDQCVQILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWIIGEYAER 416
++ ++ + +D+ P E++ L CE + + + E K ++IW++G + ER
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGER 449
Query: 417 IDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
I NA V+++LLTA ++LFL +P E Q M+ +L E +
Sbjct: 450 IPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPAEC-QDMLGRLLYYCIEEEKD 508
Query: 476 PDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL--DPSL--LDELLANIATLSS 531
+RDR Y+RLL + K ++ + K SD + L DP+ ++ ++ TL
Sbjct: 509 MAVRDRGLFYYRLLLVGIDEVKRILCSPK---SDPTLGLLEDPAERPVNSWASDFNTLVP 565
Query: 532 VYHKPPEAFVTRVKTTASRTDDE 554
VY K A +++ + A R D E
Sbjct: 566 VYGKAHWATISKCQG-AERCDPE 587
>ZFIN|ZDB-GENE-040426-1284 [details] [associations]
symbol:ap4b1 "adaptor-related protein complex 4,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 ZFIN:ZDB-GENE-040426-1284
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 eggNOG:COG5096 GO:GO:0030131
PANTHER:PTHR11134 CTD:10717 HOGENOM:HOG000294128 HOVERGEN:HBG050521
KO:K12401 OrthoDB:EOG48KR9Z EMBL:BC053128 IPI:IPI00488851
RefSeq:NP_956632.1 UniGene:Dr.80194 ProteinModelPortal:Q7T3G3
STRING:Q7T3G3 PRIDE:Q7T3G3 GeneID:393309 KEGG:dre:393309
NextBio:20814361 ArrayExpress:Q7T3G3 Bgee:Q7T3G3 Uniprot:Q7T3G3
Length = 729
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 167/576 (28%), Positives = 282/576 (48%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G DVS+LF D+V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDVSALFMDMVKASATVDIVQKKLVYLYMCTYASDKPDLALLAINTLRKDCADPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R M R+ +TEY+ P+ L+D YVR+ A + AK++ + D
Sbjct: 100 MVRGLALRNMCNFRMPGMTEYIEQPIVAGLRDKASYVRRVAVLGCAKMHSLQPRTEIDGS 159
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFE--ITSHTLSKLLTALNECTEWGQ 178
+ L L+ D + I H L++L +C W Q
Sbjct: 160 LVNELYALLRDPDPVVVVNCLRALEDILKDEGGVVINKPIAHHLLNRLKDL--DC--WAQ 215
Query: 179 VFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNL 238
+L L RY+ + E +I+ + P LQ + V +S +++ L + L
Sbjct: 216 SEVLTFLLRYRPRNDDELFDILSLLDPFLQSSQSHVAISTLRLFLHLAAAHPAVQADALL 275
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
C AP L T +A E+++ L +I +++ +P + K FFC Y++P Y+K K+E
Sbjct: 276 CSS-APLLATCGAASRELRFAGLCHIQQVMRSQPALFNTHYKRFFCGYSEPSYIKFRKME 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
I++ L +D N+ VL E K Y T+V + + A+ AIGR +E+C+ +L L+
Sbjct: 335 ILVALVNDENVALVLEEMKSYCTDVSAELAQAAIAAIGRIG---RTYSEKCLDILTGLLA 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
+K +++ I +D+ P ++ T+ +D + E K +++W++GE+A++I
Sbjct: 392 LKQDHITSAVIQTFRDLVWFCPQCTAAVCLTVESCVDYPQDSEGKQALLWLLGEHADQIS 451
Query: 419 NADXXXXXXXXXXXXX-XAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPD 477
+A A +++++LTA +K+FL++P E Q M+ +L+ E +
Sbjct: 452 SAPYLLEVYIDGLKTELSAALKMEILTAALKMFLRRPAE-TQDMLGRLLHYCIEEESDMC 510
Query: 478 LRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPP 537
+RDRA +Y+RLL E + VV K SD S + S +E ++ ++ +
Sbjct: 511 VRDRALLYYRLLQRGIEETRKVVTGPK---SDPSLSVLTSAQEEPVSQWVSIFNTLGPLS 567
Query: 538 EAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVAD 573
A + T S ++ D +E P + D
Sbjct: 568 AADLQLHNTALSASEHTDDTADTELLTEHVPVSMRD 603
>GENEDB_PFALCIPARUM|MAL7P1.164 [details] [associations]
symbol:MAL7P1.164 "adapter-related protein,
putative" species:5833 "Plasmodium falciparum" [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 PANTHER:PTHR11134 GO:GO:0030130 EMBL:AL844506
RefSeq:XP_001349197.2 ProteinModelPortal:Q8IBF8
EnsemblProtists:MAL7P1.164:mRNA GeneID:2654988 KEGG:pfa:MAL7P1.164
EuPathDB:PlasmoDB:PF3D7_0730200 HOGENOM:HOG000283882
ProtClustDB:CLSZ2500660 Uniprot:Q8IBF8
Length = 858
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 159/547 (29%), Positives = 279/547 (51%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVS LF D++ T ++ KK++YLYL NYA++ +L++L +NT KDS+D +P
Sbjct: 38 MTLGVDVSKLFPDIIMISSTNDIIQKKMIYLYLNNYAETNSELSLLTINTLQKDSKDDDP 97
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+RT +R++ + EY+ PL L D + YVR+ A I KL +N +L
Sbjct: 98 IIRGLALRTFCNLRINNLFEYIEGPLFNGLNDKNSYVRRIAIISCVKLIKMNPDLSIRND 157
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ LK+ + D ++ + +L L+ EWG+
Sbjct: 158 IIKILKNKLLDKDPQCIINSVHALNEILIDEGG--LKVNKEIVFNMLNKLSHFNEWGKSV 215
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
IL +S Y + E +I+ + ++ + V L+ +K L I T++ + +
Sbjct: 216 ILYIVSTYIPENEDEMYDIMNILENHIRDFSSTVFLACLKCFLNFS--INDTNLQIQIFQ 273
Query: 241 KMAPPLVTLLSAEP-EIQYVALRNINLIVQRRPT----ILAHEIKVFFCKYNDPIYVKME 295
+M PL+TL+S EI Y+ L + NL++ I ++ K FF +YND Y+K
Sbjct: 274 RMKDPLLTLISTSSNEIAYIVLLHTNLLLHEANKLNYKIFDYDYKHFFFRYNDLTYIKDI 333
Query: 296 KLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLE 355
KL+I++ +AS N+ ++ E EY ++ +V+ +KA+ +IG A+K+ + R + + L
Sbjct: 334 KLDILVSVASKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISRVVELSLS 393
Query: 356 -LIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYA 414
+ + +Y+ I ++ +I R+Y + II + + + L + S IWIIGEY
Sbjct: 394 NFMTMNYSYICSATIKILVNILRKYEEYTKLIIEEIIKHGNRLIDNGGIISYIWIIGEYC 453
Query: 415 ERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETD 474
E I+ A L+LLTA VK+ ++P E + ++ + +N
Sbjct: 454 EYIEEAPYLLEEYINLRNCSYL-FMLELLTACVKVLYRRPAE-MKNIVSTLFDNILKNYK 511
Query: 475 NPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYH 534
P+L D+ + Y++LLS + + A ++ +K ++ + S + LLD+L TLS +Y
Sbjct: 512 YPELTDKMFFYYKLLSYNYKEAFHIIACKKKIVKNFSESNENLLLDKLYNEFNTLSVLYK 571
Query: 535 KPPEAFV 541
+P FV
Sbjct: 572 QPLNKFV 578
>UNIPROTKB|Q8IBF8 [details] [associations]
symbol:MAL7P1.164 "Adapter-related protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=ISS]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 PANTHER:PTHR11134 GO:GO:0030130 EMBL:AL844506
RefSeq:XP_001349197.2 ProteinModelPortal:Q8IBF8
EnsemblProtists:MAL7P1.164:mRNA GeneID:2654988 KEGG:pfa:MAL7P1.164
EuPathDB:PlasmoDB:PF3D7_0730200 HOGENOM:HOG000283882
ProtClustDB:CLSZ2500660 Uniprot:Q8IBF8
Length = 858
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 159/547 (29%), Positives = 279/547 (51%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVS LF D++ T ++ KK++YLYL NYA++ +L++L +NT KDS+D +P
Sbjct: 38 MTLGVDVSKLFPDIIMISSTNDIIQKKMIYLYLNNYAETNSELSLLTINTLQKDSKDDDP 97
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+RT +R++ + EY+ PL L D + YVR+ A I KL +N +L
Sbjct: 98 IIRGLALRTFCNLRINNLFEYIEGPLFNGLNDKNSYVRRIAIISCVKLIKMNPDLSIRND 157
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ LK+ + D ++ + +L L+ EWG+
Sbjct: 158 IIKILKNKLLDKDPQCIINSVHALNEILIDEGG--LKVNKEIVFNMLNKLSHFNEWGKSV 215
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
IL +S Y + E +I+ + ++ + V L+ +K L I T++ + +
Sbjct: 216 ILYIVSTYIPENEDEMYDIMNILENHIRDFSSTVFLACLKCFLNFS--INDTNLQIQIFQ 273
Query: 241 KMAPPLVTLLSAEP-EIQYVALRNINLIVQRRPT----ILAHEIKVFFCKYNDPIYVKME 295
+M PL+TL+S EI Y+ L + NL++ I ++ K FF +YND Y+K
Sbjct: 274 RMKDPLLTLISTSSNEIAYIVLLHTNLLLHEANKLNYKIFDYDYKHFFFRYNDLTYIKDI 333
Query: 296 KLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLE 355
KL+I++ +AS N+ ++ E EY ++ +V+ +KA+ +IG A+K+ + R + + L
Sbjct: 334 KLDILVSVASKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISRVVELSLS 393
Query: 356 -LIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYA 414
+ + +Y+ I ++ +I R+Y + II + + + L + S IWIIGEY
Sbjct: 394 NFMTMNYSYICSATIKILVNILRKYEEYTKLIIEEIIKHGNRLIDNGGIISYIWIIGEYC 453
Query: 415 ERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETD 474
E I+ A L+LLTA VK+ ++P E + ++ + +N
Sbjct: 454 EYIEEAPYLLEEYINLRNCSYL-FMLELLTACVKVLYRRPAE-MKNIVSTLFDNILKNYK 511
Query: 475 NPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYH 534
P+L D+ + Y++LLS + + A ++ +K ++ + S + LLD+L TLS +Y
Sbjct: 512 YPELTDKMFFYYKLLSYNYKEAFHIIACKKKIVKNFSESNENLLLDKLYNEFNTLSVLYK 571
Query: 535 KPPEAFV 541
+P FV
Sbjct: 572 QPLNKFV 578
>UNIPROTKB|F1PTH0 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
EMBL:AAEX03010988 EMBL:AAEX03010989 Ensembl:ENSCAFT00000014726
Uniprot:F1PTH0
Length = 903
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 165/565 (29%), Positives = 282/565 (49%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G DVS +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 205 MTQGLDVSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 264
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 265 MVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 324
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D + I LL + + +WGQ
Sbjct: 325 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMPKLDQWGQAE 382
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL + TDV L
Sbjct: 383 VLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFPHVQTDV---L 439
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ + AL ++ I+ P + K FFC Y++P Y+K++K+E
Sbjct: 440 VQVKGPLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 499
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A ++C+ +L EL+
Sbjct: 500 VLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTDQCVQILTELLG 556
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWIIGEYAER 416
++ ++ + +D+ P E++ L CE + + + E K ++IW++G + ER
Sbjct: 557 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGER 614
Query: 417 IDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
I NA V+++LLTA ++LFL +P E Q M+ +L+ E +
Sbjct: 615 IPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLCRPAEC-QDMLGRLLHYCIEEEKD 673
Query: 476 PDLRDRAYIYWRLLSTDPEAAKDVVLAEK--PVISDDSNQLDPSLLDELLANIATLSSVY 533
+RDR Y+RLL + K ++ + K P + +Q + + + ++ TL VY
Sbjct: 674 MAVRDRGLFYYRLLLAGIDEVKRILCSPKSDPSLGLLEDQAERPV-NSWASDFNTLVPVY 732
Query: 534 HKPPEAFVTRVKTTASRTDDEDYPN 558
K A +++ + R + PN
Sbjct: 733 GKARWAAISKYQGAEHR--GPELPN 755
>RGD|1310529 [details] [associations]
symbol:Ap4b1 "adaptor-related protein complex 4, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005802 "trans-Golgi network"
evidence=IEA;ISO] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 RGD:1310529 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0005802 GO:GO:0030131 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 CTD:10717 KO:K12401 OrthoDB:EOG48KR9Z
OMA:EQFEKTW EMBL:CH474015 IPI:IPI00197290 RefSeq:NP_001101179.1
UniGene:Rn.8746 Ensembl:ENSRNOT00000026382 GeneID:310746
KEGG:rno:310746 UCSC:RGD:1310529 NextBio:662544 Uniprot:D4AD35
Length = 739
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 161/552 (29%), Positives = 279/552 (50%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL + TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPHVQTDV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ + AL ++ ++ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A + ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGNIA---KTYTDQCVQILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWIIGEYAER 416
++ ++ + +D+ P E++ L CE + + + E K ++IW++G + E+
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGEK 449
Query: 417 IDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
I NA V+++LLTA ++LFL +P E + +++L E D
Sbjct: 450 IPNAPYVLEDFVESVKSETFPAVKMELLTALMRLFLSRPAECQDVLGRLLLYCIEEEKDM 509
Query: 476 PDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL---DPSL-LDELLANIATLSS 531
+RDR Y+RLL + K ++ + K SD S L P ++ ++ TL+
Sbjct: 510 A-VRDRGLFYYRLLLVGIDKTKQILCSPK---SDPSLGLLEDQPERPVNSWASDFNTLAP 565
Query: 532 VYHKPPEAFVTR 543
VY K A +++
Sbjct: 566 VYGKAHWATISK 577
>UNIPROTKB|F1SBR2 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005802
GO:GO:0030131 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
CTD:10717 KO:K12401 OMA:EQFEKTW EMBL:CU651648 RefSeq:XP_003125886.1
UniGene:Ssc.38340 Ensembl:ENSSSCT00000007408 GeneID:100516855
KEGG:ssc:100516855 Uniprot:F1SBR2
Length = 737
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 161/550 (29%), Positives = 276/550 (50%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLQGDSEVDGA 159
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D + I LL + + +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMPKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL + TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFPHVQTDV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ + AL ++ I+ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VQVKGPLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVSADFAQAAILAIGGIA---RTYTDQCVQILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWIIGEYAER 416
++ ++ + +D+ P E++ L CE + + + E K ++IW++G + ER
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGER 449
Query: 417 IDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
I NA V+++LLTA ++LFL +P E Q M+ +L E +
Sbjct: 450 IPNAPYVLEDFVENVKSEAFPAVKMELLTALLRLFLSRPAEC-QDMLGRLLYYCIEEEKD 508
Query: 476 PDLRDRAYIYWRLLSTDPEAAKDVVLAEK--PVISDDSNQLDPSLLDELLANIATLSSVY 533
+RDR Y+RLL + + K ++ + K P + +Q + + + ++ TL VY
Sbjct: 509 MAVRDRGLFYYRLLLSGIDEVKRILCSPKSDPSLGLLEDQAERPV-NSWASDFNTLVPVY 567
Query: 534 HKPPEAFVTR 543
K A +++
Sbjct: 568 GKARWATISK 577
>UNIPROTKB|F6PZ41 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005802
GO:GO:0030131 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 GeneTree:ENSGT00530000063138 OMA:EQFEKTW
EMBL:DAAA02007479 IPI:IPI00703589 PRIDE:F6PZ41
Ensembl:ENSBTAT00000004711 Uniprot:F6PZ41
Length = 739
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 156/520 (30%), Positives = 268/520 (51%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGVDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL + TDV+
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFPHVQTDVLM-- 275
Query: 239 CKKMAPPLVTLLSAEP-EIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKL 297
++ PL+ S+E E+ + AL ++ I+ P + K FFC Y++P Y+K++K+
Sbjct: 276 --QVKGPLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKV 333
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELI 357
E++ +L +D N+ QVL E + Y T+V DF + A+ AIG A ++C+ +L EL+
Sbjct: 334 EVLCELVNDENVQQVLEELRGYCTDVSADFAQAAILAIGGIA---RTYTDQCMQILTELL 390
Query: 358 KIKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWIIGEYAE 415
++ ++ + +D+ P E++ L CE + + + E K ++IW++G + +
Sbjct: 391 GLRQEHITTVVVQTFRDLAWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGK 448
Query: 416 RIDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETD 474
RI NA V+++LLTA ++LF +P E Q M+ +L+ E
Sbjct: 449 RIPNAPYVLEDFIENVKSETFPAVKMELLTAVLRLFFSRPAEC-QDMLGRLLHYCIEEEK 507
Query: 475 NPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL 514
+ +RDR Y+RLL AK ++ + K SD S +L
Sbjct: 508 DMAVRDRGLFYYRLLLAGISEAKQILCSPK---SDPSLRL 544
>MGI|MGI:1337130 [details] [associations]
symbol:Ap4b1 "adaptor-related protein complex AP-4, beta 1"
species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IDA;TAS]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 MGI:MGI:1337130 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0005802 eggNOG:COG5096 GO:GO:0030131
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 CTD:10717 HOGENOM:HOG000294128
HOVERGEN:HBG050521 KO:K12401 OrthoDB:EOG48KR9Z EMBL:AF155157
EMBL:AC124698 EMBL:CU210953 IPI:IPI00125391 RefSeq:NP_001157024.1
RefSeq:NP_080469.2 UniGene:Mm.197568 ProteinModelPortal:Q9WV76
STRING:Q9WV76 PhosphoSite:Q9WV76 PaxDb:Q9WV76 PRIDE:Q9WV76
Ensembl:ENSMUST00000047285 Ensembl:ENSMUST00000076599 GeneID:67489
KEGG:mmu:67489 InParanoid:Q9WV76 OMA:EQFEKTW ChiTaRS:AP4B1
NextBio:324726 CleanEx:MM_AP4B1 Genevestigator:Q9WV76
GermOnline:ENSMUSG00000032952 Uniprot:Q9WV76
Length = 738
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 160/552 (28%), Positives = 279/552 (50%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL + TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPHVQTDV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ + AL ++ ++ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A + ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVAADFAQAAIFAIGSIA---KTYTDQCVQILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWIIGEYAER 416
++ ++ + +D+ P E++ L CE + + + E K ++IW++G + E+
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGEK 449
Query: 417 IDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
I NA V+++LLTA ++L L +P E Q M+ +L+ E +
Sbjct: 450 IPNAPYVLEDFVDNVKSETFPAVKMELLTALMRLVLSRPAEC-QDMLGRLLHYCIEEEKD 508
Query: 476 PDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL---DPSL-LDELLANIATLSS 531
+RDR Y+RLL + K ++ + K SD S L P ++ ++ TL+
Sbjct: 509 MAVRDRGLFYYRLLLVGIDKVKQILCSPK---SDPSLGLLEDQPERPVNSWASDFNTLAP 565
Query: 532 VYHKPPEAFVTR 543
VY + A +++
Sbjct: 566 VYGRAHWATISK 577
>UNIPROTKB|F1NLK7 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=IEA] InterPro:IPR002553 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0005802 GO:GO:0030131
PANTHER:PTHR11134 GeneTree:ENSGT00530000063138 OMA:EQFEKTW
EMBL:AADN02045017 IPI:IPI00822122 Ensembl:ENSGALT00000002443
ArrayExpress:F1NLK7 Uniprot:F1NLK7
Length = 740
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 158/549 (28%), Positives = 268/549 (48%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G DVS LF ++V ++ KKLV LY+ +A P LA+LAVNT +D DP+P
Sbjct: 40 MTQGADVSGLFAEMVKAGAAADVVQKKLVQLYVCAHAPRMPRLALLAVNTLRRDCADPSP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+R LA+R + +R+ + EY+ PL L+D YVR+ A + AK++ + + D
Sbjct: 100 AVRGLALRGLCDLRMPGMQEYVQQPLLSGLRDRASYVRRIAVLGCAKVHRLQGDAEVDGA 159
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D + I LL + + +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRALEEILKKEGGVV--INKPIAHHLLNRMADLDQWGQSE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITSTDVVRNL 238
+L L RY+ E NI+ + L+ ++ +VV++A K+ +L + DV L
Sbjct: 218 VLAFLLRYRPRSEEELFNILSLLDGYLKSSSPSVVMAATKLFLVLAREYPHVQADV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ + AL ++ I+ P + K FFC Y++P Y+K +K+E
Sbjct: 275 VRVKGPLLAACTSESRELCFTALCHVRQILSSLPGHFSSHYKKFFCSYSEPHYIKCQKME 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E K Y T++ V+ + A+ AIG A E+C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELKGYCTDISVELAQGAISAIGSIA---RTYTEQCVGILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWIIGEYAER 416
++ ++ + +D+ P +++ L CE D + + E K ++IW++G + E+
Sbjct: 392 LQQEHITSAVVQAFRDLVWLCPQCTDAVCQALPGCE--DIIQDSEGKQALIWLLGAHGEK 449
Query: 417 IDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
+ NA V+++LLTA V+LFL +P E Q M+ +L + E +
Sbjct: 450 VPNAPYVLEDFVENVKTEVFPAVKMELLTALVRLFLSRPAEC-QDMLGRLLYHCIEEEKD 508
Query: 476 PDLRDRAYIYWRLLSTDPEAAKDVVLAEK--PVISDDSNQLDPSLLDELLANIATLSSVY 533
+RDR Y+RLL + + K V+ + K P + +Q + + + + TL+ +Y
Sbjct: 509 MSVRDRGLFYYRLLQSGVDEVKRVLCSPKSDPSLGLLEDQTEQPV-NTWASEFNTLAPIY 567
Query: 534 HKPPEAFVT 542
K A VT
Sbjct: 568 GKARWALVT 576
>UNIPROTKB|F1NY63 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0005634
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134
GeneTree:ENSGT00530000063546 GO:GO:0030123 PANTHER:PTHR11134:SF1
OMA:ANLGRVP EMBL:AADN02051067 IPI:IPI00585101
Ensembl:ENSGALT00000003336 Uniprot:F1NY63
Length = 1060
Score = 389 (142.0 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 97/314 (30%), Positives = 163/314 (51%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
+V P LQ N AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 264 LVRNTKPLLQSRNAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 315
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI +L EF+
Sbjct: 316 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNISTILREFQT 375
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + + + C++ L++L+ + VV E+++VIK + +
Sbjct: 376 YIRSMDKDFVAATIQAIGRCATNIGKVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 435
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + D + P A+AS++W+IGEY E + A
Sbjct: 436 QPAQHSEIIKHMAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDI 495
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRA-YIYWRLLSTDPEAA 496
V+LQ++ KL+L + + + Q VLN A + N D+RDRA +I ++ T+ A
Sbjct: 496 VKLQVINLAAKLYLTNSKQS-KLLTQYVLNLAKYD-QNYDIRDRARFIRQLIVPTEKSGA 553
Query: 497 -----KDVVLAEKP 505
K + LA+KP
Sbjct: 554 LNKYAKKLFLAQKP 567
Score = 287 (106.1 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 67/185 (36%), Positives = 104/185 (56%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 30 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 89
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 90 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 147
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I++
Sbjct: 148 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIN 203
Query: 184 ALSRY 188
L+RY
Sbjct: 204 MLTRY 208
Score = 38 (18.4 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 542 TRVKTTASRTDDEDYPNGSEQGYSDAPTHVAD---EGASPQTSSSN 584
T+ + R D + P S+ PT AD E S ++ SS+
Sbjct: 622 TKCTSREKRKDKVEKPFYSDSEGESGPTESADSEPESDSEESGSSS 667
>RGD|1308950 [details] [associations]
symbol:Ap3b2 "adaptor-related protein complex 3, beta 2 subunit"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=IEA;ISO] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008089 "anterograde axon
cargo transport" evidence=IEA;ISO] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0048490 "anterograde synaptic vesicle
transport" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 RGD:1308950
GO:GO:0005634 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 CTD:8120 OrthoDB:EOG4VQ9NJ
OMA:ANLGRVP IPI:IPI00767753 RefSeq:XP_003748939.1
RefSeq:XP_003753350.1 PRIDE:D4AE00 Ensembl:ENSRNOT00000026030
GeneID:308777 KEGG:rno:308777 Uniprot:D4AE00
Length = 1082
Score = 377 (137.8 bits), Expect = 3.7e-57, Sum P(2) = 3.7e-57
Identities = 108/398 (27%), Positives = 190/398 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 305 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 356
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 357 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 416
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 417 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 476
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 477 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDI 536
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L++ +
Sbjct: 537 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIAPSEQGGA 594
Query: 496 ----AKDVVLAEKP--VISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTAS 549
AK + LA KP ++ D L L + ++ Y + P+ +
Sbjct: 595 LSRHAKKLFLAPKPAPILESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVR 654
Query: 550 RTDDEDYP---NGSEQGYSDAPTHVADEGASPQTSSSN 584
+ ++ N ++ + P + EG S T S++
Sbjct: 655 NVEVPEWTKCSNREKRKEKEKPFYSDSEGESGPTESAD 692
Score = 286 (105.7 bits), Expect = 3.7e-57, Sum P(2) = 3.7e-57
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 185
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY 188
L+RY
Sbjct: 242 MLTRY 246
Score = 44 (20.5 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 494 EAAKDVVLAEKPVISDDSNQL-----DPSLLDELLANIATLSSVY-HKPPEAFV 541
EAA + A KP + D ++L P L A + ++ +Y H P+A V
Sbjct: 284 EAATAALPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAEV 337
Score = 39 (18.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 8/44 (18%), Positives = 23/44 (52%)
Query: 224 QQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLI 267
+++ L+ D + ++PP+V S +++ + L + +L+
Sbjct: 804 KEISLLDLEDFTSPSVQPVSPPMVVSTSLAADLEGLTLTDSSLV 847
>UNIPROTKB|F1P7W8 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 EMBL:AAEX03002348
EMBL:AAEX03002349 EMBL:AAEX03002347 Ensembl:ENSCAFT00000020838
Uniprot:F1P7W8
Length = 1084
Score = 376 (137.4 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 108/380 (28%), Positives = 181/380 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 287 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 338
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 339 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 398
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 399 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 458
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 459 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDI 518
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 519 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGGA 576
Query: 496 ----AKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRT 551
AK + LA KP + L+ S D + +LS + + + +
Sbjct: 577 LSRHAKKLFLAPKP-----APVLESSFKDRDHFQLGSLSHLLNAKATGY-QELPDWPEEA 630
Query: 552 DDEDYPNGSEQGYSDAPTHV 571
D N E+ S THV
Sbjct: 631 PDPSVRNVEEEDLSLIETHV 650
Score = 286 (105.7 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 50 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 109
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 110 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 167
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I+
Sbjct: 168 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIS 223
Query: 184 ALSRY 188
L+RY
Sbjct: 224 MLTRY 228
>UNIPROTKB|B7ZKS0 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 InterPro:IPR013041 InterPro:IPR008153
GO:GO:0005634 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 Gene3D:2.60.40.1230 GO:GO:0044431
HOVERGEN:HBG050519 GO:GO:0030123 PANTHER:PTHR11134:SF1
UniGene:Hs.199593 HGNC:HGNC:567 OMA:ANLGRVP EMBL:AC105339
EMBL:FJ695193 EMBL:BC143346 IPI:IPI01015491 SMR:B7ZKS0
STRING:B7ZKS0 Ensembl:ENST00000535359 UCSC:uc010uoi.2
Uniprot:B7ZKS0
Length = 1101
Score = 376 (137.4 bits), Expect = 5.4e-57, Sum P(2) = 5.4e-57
Identities = 108/380 (28%), Positives = 181/380 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 305 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 356
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 357 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 416
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 417 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 476
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 477 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDI 536
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 537 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGGA 594
Query: 496 ----AKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRT 551
AK + LA KP + L+ S D + +LS + + + +
Sbjct: 595 LSRHAKKLFLAPKP-----APVLESSFKDRDHFQLGSLSHLLNAKATGY-QELPDWPEEA 648
Query: 552 DDEDYPNGSEQGYSDAPTHV 571
D N E+ S THV
Sbjct: 649 PDPSVRNVEEEDLSLIETHV 668
Score = 286 (105.7 bits), Expect = 5.4e-57, Sum P(2) = 5.4e-57
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 185
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY 188
L+RY
Sbjct: 242 MLTRY 246
>UNIPROTKB|Q13367 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=ISS] [GO:0048490
"anterograde synaptic vesicle transport" evidence=ISS] [GO:0005215
"transporter activity" evidence=TAS] [GO:0030137 "COPI-coated
vesicle" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0005634 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006897
GO:GO:0005215 GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665
PANTHER:PTHR11134 SUPFAM:SSF49348 GO:GO:0006892 Gene3D:2.60.40.1230
HOVERGEN:HBG050519 KO:K12397 GO:GO:0030123 GO:GO:0048490
PANTHER:PTHR11134:SF1 EMBL:U37673 EMBL:AF022152 EMBL:DQ092369
EMBL:BC093739 IPI:IPI00005793 IPI:IPI01011317 PIR:T50650
RefSeq:NP_004635.2 UniGene:Hs.199593 ProteinModelPortal:Q13367
SMR:Q13367 IntAct:Q13367 STRING:Q13367 PhosphoSite:Q13367
DMDM:18202497 PaxDb:Q13367 PRIDE:Q13367 Ensembl:ENST00000261722
GeneID:8120 KEGG:hsa:8120 UCSC:uc010uog.2 CTD:8120
GeneCards:GC15M083328 HGNC:HGNC:567 HPA:HPA039467 HPA:HPA039818
MIM:602166 neXtProt:NX_Q13367 PharmGKB:PA24858 InParanoid:Q13367
OrthoDB:EOG4VQ9NJ GenomeRNAi:8120 NextBio:30780 ArrayExpress:Q13367
Bgee:Q13367 CleanEx:HS_AP3B2 Genevestigator:Q13367
GermOnline:ENSG00000103723 GO:GO:0030137 Uniprot:Q13367
Length = 1082
Score = 375 (137.1 bits), Expect = 6.7e-57, Sum P(2) = 6.7e-57
Identities = 109/398 (27%), Positives = 189/398 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 305 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 356
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 357 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 416
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 417 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 476
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 477 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDI 536
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 537 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGGA 594
Query: 496 ----AKDVVLAEKP--VISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTAS 549
AK + LA KP V+ D L L + ++ Y + P+ +
Sbjct: 595 LSRHAKKLFLAPKPAPVLESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVR 654
Query: 550 RTDDEDYP---NGSEQGYSDAPTHVADEGASPQTSSSN 584
+ ++ N ++ + P + EG S T S++
Sbjct: 655 NVEVPEWTKCSNREKRKEKEKPFYSDSEGESGPTESAD 692
Score = 286 (105.7 bits), Expect = 6.7e-57, Sum P(2) = 6.7e-57
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 185
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY 188
L+RY
Sbjct: 242 MLTRY 246
Score = 39 (18.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 23/104 (22%), Positives = 40/104 (38%)
Query: 472 ETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSS 531
E +P +R+ W S + E K+ EKP SD + P+ E A+ S
Sbjct: 647 EAPDPSVRNVEVPEWTKCS-NREKRKE---KEKPFYSDSEGESGPT---ES-ADSDPESE 698
Query: 532 VYHKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEG 575
+ + ++S +D+ED E+G ++G
Sbjct: 699 SESDSKSSSESGSGESSSESDNEDQDEDEEKGRGSESEQSEEDG 742
>UNIPROTKB|E1BME2 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044431
"Golgi apparatus part" evidence=IEA] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 InterPro:IPR013041 InterPro:IPR008153
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134 SUPFAM:SSF49348
Gene3D:2.60.40.1230 GO:GO:0044431 GeneTree:ENSGT00530000063546
KO:K12397 GO:GO:0030123 PANTHER:PTHR11134:SF1 CTD:8120 OMA:ANLGRVP
EMBL:DAAA02052226 IPI:IPI00923881 RefSeq:NP_001230264.1
UniGene:Bt.10002 Ensembl:ENSBTAT00000061606 GeneID:784163
KEGG:bta:784163 NextBio:20926528 ArrayExpress:E1BME2 Uniprot:E1BME2
Length = 1085
Score = 375 (137.1 bits), Expect = 6.8e-57, Sum P(2) = 6.8e-57
Identities = 109/398 (27%), Positives = 189/398 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 305 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 356
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 357 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 416
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 417 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 476
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 477 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDI 536
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 537 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGGA 594
Query: 496 ----AKDVVLAEKP--VISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTAS 549
AK + LA KP V+ D L L + ++ Y + P+ +
Sbjct: 595 LSRHAKKLFLAPKPAPVLESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVR 654
Query: 550 RTDDEDYP---NGSEQGYSDAPTHVADEGASPQTSSSN 584
+ ++ N ++ + P + EG S T S++
Sbjct: 655 NVEVPEWTKCSNREKRKEKEKPFYSDSEGESGPTESAD 692
Score = 286 (105.7 bits), Expect = 6.8e-57, Sum P(2) = 6.8e-57
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 185
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY 188
L+RY
Sbjct: 242 MLTRY 246
Score = 48 (22.0 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 25/104 (24%), Positives = 42/104 (40%)
Query: 472 ETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSS 531
E +P +R+ W S + E K+ EKP SD + P+ E A+ S
Sbjct: 647 EAPDPSVRNVEVPEWTKCS-NREKRKE---KEKPFYSDSEGESGPT---ES-ADSDPESE 698
Query: 532 VYHKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEG 575
+ + + ++S +D+ED E+G S +EG
Sbjct: 699 SESESKSSSESGSGESSSESDNEDQEEDEEKGRSSESEQSEEEG 742
Score = 46 (21.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 494 EAAKDVVLAEKPVISDDSNQL-----DPSLLDELLANIATLSSVY-HKPPEAFV 541
EAA + A KP + D ++L P L A + ++ +Y H P+A V
Sbjct: 284 EAASTALPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAEV 337
>UNIPROTKB|J9P1J6 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:ANLGRVP EMBL:AAEX03002348
EMBL:AAEX03002349 EMBL:AAEX03002347 Ensembl:ENSCAFT00000049658
Uniprot:J9P1J6
Length = 1102
Score = 375 (137.1 bits), Expect = 7.2e-57, Sum P(2) = 7.2e-57
Identities = 109/398 (27%), Positives = 189/398 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 348 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 399
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 400 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 459
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 460 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 519
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 520 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDI 579
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 580 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGGA 637
Query: 496 ----AKDVVLAEKP--VISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTAS 549
AK + LA KP V+ D L L + ++ Y + P+ +
Sbjct: 638 LSRHAKKLFLAPKPAPVLESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVR 697
Query: 550 RTDDEDYP---NGSEQGYSDAPTHVADEGASPQTSSSN 584
+ ++ N ++ + P + EG S T S++
Sbjct: 698 NVEVPEWTKCSNREKRKEKEKPFYSDSEGESGPTESAD 735
Score = 286 (105.7 bits), Expect = 7.2e-57, Sum P(2) = 7.2e-57
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 111 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 170
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 171 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 228
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I+
Sbjct: 229 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIS 284
Query: 184 ALSRY 188
L+RY
Sbjct: 285 MLTRY 289
>UNIPROTKB|F1RI97 [details] [associations]
symbol:F1RI97 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:ANLGRVP EMBL:CU326406
Ensembl:ENSSSCT00000002023 Uniprot:F1RI97
Length = 1082
Score = 374 (136.7 bits), Expect = 9.1e-57, Sum P(2) = 9.1e-57
Identities = 102/349 (29%), Positives = 172/349 (49%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 305 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 356
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 357 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 416
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 417 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 476
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 477 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDI 536
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 537 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGGA 594
Query: 496 ----AKDVVLAEKP--VISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
AK + LA KP V+ D L L + ++ Y + P+
Sbjct: 595 LSRHAKKLFLAPKPAPVLESSFKDRDHFQLGSLSHLLNAKATGYQELPD 643
Score = 286 (105.7 bits), Expect = 9.1e-57, Sum P(2) = 9.1e-57
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 185
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY 188
L+RY
Sbjct: 242 MLTRY 246
Score = 45 (20.9 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 494 EAAKDVVLAEKPVISDDSNQL-----DPSLLDELLANIATLSSVY-HKPPEAFV 541
EAA + A KP + D ++L P L A + ++ +Y H P+A V
Sbjct: 284 EAAATTLPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAEV 337
Score = 39 (18.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 24/103 (23%), Positives = 40/103 (38%)
Query: 472 ETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSS 531
E +P +R+ W S+ E K+ EKP SD + P+ E A+ S
Sbjct: 647 EAPDPSVRNVEVPEWTKCSSR-EKRKE---KEKPFYSDSEGESGPT---ES-ADSDPESE 698
Query: 532 VYHKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADE 574
+ + ++S +D+ED E+G S +E
Sbjct: 699 SESDSKSSSESGSGGSSSESDNEDQDEDEEKGRSSESDQSEEE 741
>MGI|MGI:1100869 [details] [associations]
symbol:Ap3b2 "adaptor-related protein complex 3, beta 2
subunit" species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 MGI:MGI:1100869 GO:GO:0005634
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006897 GO:GO:0008089 GO:GO:0005802
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GeneTree:ENSGT00530000063546 HOGENOM:HOG000033978
HOVERGEN:HBG050519 KO:K12397 GO:GO:0030123 GO:GO:0048490
PANTHER:PTHR11134:SF1 CTD:8120 OrthoDB:EOG4VQ9NJ EMBL:AY528675
EMBL:BC139378 EMBL:BC139379 EMBL:AK134504 EMBL:AB030202
IPI:IPI00420426 RefSeq:NP_067467.2 UniGene:Mm.322894
ProteinModelPortal:Q9JME5 SMR:Q9JME5 IntAct:Q9JME5 STRING:Q9JME5
PhosphoSite:Q9JME5 PaxDb:Q9JME5 PRIDE:Q9JME5
Ensembl:ENSMUST00000082090 GeneID:11775 KEGG:mmu:11775
UCSC:uc009iby.1 InParanoid:Q3UYP8 OMA:ANLGRVP NextBio:279567
Bgee:Q9JME5 CleanEx:MM_AP3B2 Genevestigator:Q9JME5
GermOnline:ENSMUSG00000062444 Uniprot:Q9JME5
Length = 1082
Score = 374 (136.7 bits), Expect = 9.1e-57, Sum P(2) = 9.1e-57
Identities = 108/398 (27%), Positives = 189/398 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 305 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 356
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 357 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 416
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 417 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 476
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 477 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDI 536
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 537 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGGA 594
Query: 496 ----AKDVVLAEKP--VISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTAS 549
AK + LA KP ++ D L L + ++ Y + P+ +
Sbjct: 595 LSRHAKKLFLAPKPAPILESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVR 654
Query: 550 RTDDEDYP---NGSEQGYSDAPTHVADEGASPQTSSSN 584
+ ++ N ++ + P + EG S T S++
Sbjct: 655 NVEVPEWTKCSNREKRKEKEKPFYSDSEGESGPTESAD 692
Score = 286 (105.7 bits), Expect = 9.1e-57, Sum P(2) = 9.1e-57
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 185
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D R ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY 188
L+RY
Sbjct: 242 MLTRY 246
Score = 44 (20.5 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 494 EAAKDVVLAEKPVISDDSNQL-----DPSLLDELLANIATLSSVY-HKPPEAFV 541
EAA + A KP + D ++L P L A + ++ +Y H P+A V
Sbjct: 284 EAATAALPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAEV 337
Score = 40 (19.1 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 8/46 (17%), Positives = 24/46 (52%)
Query: 222 ILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLI 267
+ +++ L+ D + ++PP+V S +++ + L + +L+
Sbjct: 802 VAKEISLLDLEDFTPPSVQPVSPPMVVSTSLAADLEGLTLTDSSLV 847
>DICTYBASE|DDB_G0283319 [details] [associations]
symbol:ap4b1 "adaptor-related protein complex 4, beta
1 subunit" species:44689 "Dictyostelium discoideum" [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 dictyBase:DDB_G0283319
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CM000153_GR GO:GO:0016192 GO:GO:0008565 GO:GO:0030659
EMBL:AAFI02000052 eggNOG:COG5096 GO:GO:0030131 PANTHER:PTHR11134
RefSeq:XP_639163.1 ProteinModelPortal:Q54R84
EnsemblProtists:DDB0234245 GeneID:8624033 KEGG:ddi:DDB_G0283319
OMA:SEWAQCL Uniprot:Q54R84
Length = 838
Score = 501 (181.4 bits), Expect = 5.7e-56, Sum P(2) = 5.7e-56
Identities = 115/354 (32%), Positives = 194/354 (54%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVS LF DV+ + ++ +KKLVYLY+++Y+KS PDL +L VNT +D D NP
Sbjct: 54 MTIGMDVSVLFPDVIMVASSNDIIIKKLVYLYIVHYSKSNPDLLLLVVNTLRRDCIDRNP 113
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+R++ + EY + R L D YVRKTA + +AKLY ++ E +
Sbjct: 114 IIRGLALRSLCSLDSKNTLEYATIEINRSLTDFSGYVRKTALLGLAKLYHLSKEAFDLDI 173
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ + D+I D +P + T + L+ E EW Q
Sbjct: 174 IIPKIFDMIMDQDPQVIVNAVSTLNEI-----KPGWSFTFDLVQHLMIKFKEFNEWSQCI 228
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
IL+ LSRY + E+ +I+ + RL H+N A+ LS +K+ L+ + ++ + +
Sbjct: 229 ILECLSRYTPSSEDESLDILNLLDDRLSHSNSALTLSTIKIFLKYTDEFE--EIQEQVYE 286
Query: 241 KMAPPLVTLL-SAEP-EIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
++ PL+TL+ S+E E + L +I+L++ R P + K F+CK++DP+Y+K K++
Sbjct: 287 RIKEPLITLMESSESNETSFTILHHIHLLMSRSPRLFNRYYKHFYCKFDDPLYIKTLKVQ 346
Query: 299 IMIKLASDR----NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAER 348
++ ++AS++ +ID++L E EY E D ++++ AI A K + E+
Sbjct: 347 VLKEIASNQTFIESIDEILQELSEYVYEGDHSLCKQSINAITVIAQKHKNTQEK 400
Score = 106 (42.4 bits), Expect = 5.7e-56, Sum P(2) = 5.7e-56
Identities = 44/203 (21%), Positives = 90/203 (44%)
Query: 359 IKVNYVVQEAIIV-IKDIFRRYPNTYESIIATLCESLDTLDE-------PEAKASMIWII 410
I +N + I++ +KD R +P ++++ + E+L + P A S++W++
Sbjct: 430 ISINEGILSFILISLKDFLRVFPKHLKTVLPYINENLIGIGSVSNYTLPPSANESVLWML 489
Query: 411 GEYAE-RIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNA 469
GE ++++ V+ QLLT ++K+F +P E + +++
Sbjct: 490 GESPNSQVNSPYIIEEFFNEKFDQQPTFVKTQLLTTSLKVFFDRPGEMLPILKRILKKCC 549
Query: 470 TVETDNPDLRDRAYIYWRL-LSTDPEAAKDVVLAEKPVIS------DDSNQLDPSLLDEL 522
+ + +P L + + Y R+ L D + A ++ + K S D+ N+ + DE
Sbjct: 550 SDLSQDPGLHEISLFYSRIILLLDIDKAASIINSSKQTTSINTFLEDEINEYRDKIFDEF 609
Query: 523 LANIATLSSVYHKPPEAFVTRVK 545
N TLS ++ K F+ K
Sbjct: 610 --N--TLSVLFGKHSTKFIKNKK 628
>UNIPROTKB|K7EJ01 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000588116 Uniprot:K7EJ01
Length = 164
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 113/160 (70%), Positives = 134/160 (83%)
Query: 311 QVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII 370
+VL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+ KVNYVVQEAI+
Sbjct: 2 EVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIV 61
Query: 371 VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXX 430
VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERIDNAD
Sbjct: 62 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEG 121
Query: 431 XXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNAT 470
QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT
Sbjct: 122 FHDESTQVQLTLLTAIVKLFLKKPSE-TQELVQQVLSLAT 160
>FB|FBgn0003210 [details] [associations]
symbol:rb "ruby" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0008021 "synaptic
vesicle" evidence=TAS] [GO:0016183 "synaptic vesicle coating"
evidence=TAS] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0008057 "eye pigment granule organization" evidence=NAS]
[GO:0006726 "eye pigment biosynthetic process" evidence=TAS]
[GO:0007040 "lysosome organization" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0030123 "AP-3
adaptor complex" evidence=ISS] [GO:0046907 "intracellular
transport" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0031396 "regulation of protein
ubiquitination" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0007220 "Notch receptor processing"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0060967
"negative regulation of gene silencing by RNA" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0008340
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008021 EMBL:AE014298 GO:GO:0007040 GO:GO:0007220
GO:GO:0046907 PANTHER:PTHR11134 GO:GO:0016183
GeneTree:ENSGT00530000063546 KO:K12397 GO:GO:0030123
PANTHER:PTHR11134:SF1 GO:GO:0060967 GO:GO:0006727 GO:GO:0031396
ChiTaRS:RB1 RefSeq:NP_001162664.1 UniGene:Dm.1682
ProteinModelPortal:E1JJE0 SMR:E1JJE0 EnsemblMetazoa:FBtr0301530
GeneID:31381 KEGG:dme:Dmel_CG11427 CTD:31381 FlyBase:FBgn0003210
OMA:LIGEYNE PhylomeDB:E1JJE0 GenomeRNAi:31381 NextBio:773356
Bgee:E1JJE0 Uniprot:E1JJE0
Length = 1178
Score = 357 (130.7 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 111/385 (28%), Positives = 183/385 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ + P LQ N +VV+ AV + + +N + +A L+ LL + E+Q
Sbjct: 336 LLRQTKPLLQSRNASVVM-AVAQLYHHV-------APKNEVQLIAKALIRLLRSHKEVQS 387
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L I + +R I +K FF + +DP ++K+ KL+I+ LAS +I +L EF+
Sbjct: 388 VVLNCIASMSTKRKAIFEPHLKSFFVRTSDPTHIKLLKLDILTNLASAGSISLILREFQT 447
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y + D FV ++AIGRCA ++ E C+S L+ L+ +VV E+++VIK + +
Sbjct: 448 YISSSDRSFVAATIQAIGRCASSIKEVTETCLSGLVHLLSNHDEHVVAESVVVIKRLLQT 507
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
+ II + + +D ++ P A+A++IW+IGEY E++ A
Sbjct: 508 KAAEHFEIITQMAKLIDYINVPAARAAIIWLIGEYNEKVPLIAPDVLRKMAKSFVDEQDV 567
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL-------S 490
V+LQ+L VKL+L P E + Q V A + N D+RDRA +++ S
Sbjct: 568 VKLQVLNLGVKLYLTNP-EQTSLLCQYVFTLARYDP-NYDVRDRARFLRQIIFPASGTSS 625
Query: 491 TDPEAAKDVVLAEKPV-ISD----DSNQLDPSLLDELL----ANIATLSSVYHKPPEAFV 541
+ A+ V LA KP + + D N L L A L + PP++ V
Sbjct: 626 VLSQHARQVFLASKPAPVPESKYRDGNNFQLGSLSHYLNMPAAGYKELPAFPVIPPDSSV 685
Query: 542 TRVKT-TASRTDDEDYPNGSEQGYS 565
+ + ED P+G + S
Sbjct: 686 RNIAGFMQDKLPGEDSPSGHSKDKS 710
Score = 284 (105.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 67/185 (36%), Positives = 103/185 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
G+D S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 74 GRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 133
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++A+ ++ +
Sbjct: 134 ASALRVLSSIRVSMIVPIVMLAIRDSAADLSPYVRKTAAHAIPKLYSLDADQKDE--LVM 191
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+SD R ++ KL L + EWGQV I++
Sbjct: 192 VIEKLLSDRTTLVVGSAVMAFDEVC--PER--VDLIHKNYRKLCNFLLDVDEWGQVIIIN 247
Query: 184 ALSRY 188
L+RY
Sbjct: 248 MLTRY 252
>UNIPROTKB|Q7YRF1 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9615
"Canis lupus familiaris" [GO:0048490 "anterograde synaptic vesicle
transport" evidence=ISS] [GO:0008089 "anterograde axon cargo
transport" evidence=ISS] [GO:0030665 "clathrin-coated vesicle
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006897 GO:GO:0008089
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134 CTD:8546
HOGENOM:HOG000033978 HOVERGEN:HBG050519 KO:K12397 OrthoDB:EOG4H729X
GO:GO:0030123 GO:GO:0048490 PANTHER:PTHR11134:SF1 EMBL:AY221640
RefSeq:NP_001002974.1 UniGene:Cfa.169 ProteinModelPortal:Q7YRF1
STRING:Q7YRF1 PRIDE:Q7YRF1 GeneID:403459 KEGG:cfa:403459
InParanoid:Q7YRF1 NextBio:20816977 Uniprot:Q7YRF1
Length = 1091
Score = 360 (131.8 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 94/314 (29%), Positives = 158/314 (50%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV++ ++ I+ V + K LV LL + E+QY
Sbjct: 300 LIRNTKPLLQSRNAAVVMAVAQLYWH----ISPKSEVGIISKS----LVRLLRSNREVQY 351
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + +R +L +K F+ + DP +K+ KLEI+ LA++ NI +L EF+
Sbjct: 352 IVLQNIATMSIQRKGMLEPYLKSFYVRSTDPTMIKILKLEILTNLANEANISTLLREFQT 411
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++ IGRCA + + C+S L+ L+ + VV E+++VIK + +
Sbjct: 412 YVKSQDKQFAAATIQTIGRCATSISEVTDTCLSGLVCLLSNRDEIVVAESVVVIKKLLQM 471
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD++ P A+AS++W+IGE ER+ A
Sbjct: 472 QPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTNEDDL 531
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ+L KL+L + + + Q +LN + N D+RDR +L+ + ++
Sbjct: 532 VKLQILNLGAKLYLTNSKQ-TKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGA 589
Query: 496 ----AKDVVLAEKP 505
AK + LA+KP
Sbjct: 590 LSKYAKKIFLAQKP 603
Score = 278 (102.9 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 190
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVC--PDR--IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY 188
L+RY
Sbjct: 247 MLTRY 251
Score = 42 (19.8 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKE 318
KM ++I + +DR I+ + +E K+
Sbjct: 895 KMVSIQITLNNTTDRKIENIHIEGKK 920
>UNIPROTKB|E1BW97 [details] [associations]
symbol:AP3B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0032438 "melanosome
organization" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134 GO:GO:0032438
GeneTree:ENSGT00530000063546 OMA:KRIVGMI GO:GO:0030123
GO:GO:0048007 GO:GO:0051138 GO:GO:0006622 PANTHER:PTHR11134:SF1
EMBL:AADN02046168 EMBL:AADN02046169 EMBL:AADN02046170
EMBL:AADN02046171 EMBL:AADN02046172 EMBL:AADN02046173
EMBL:AADN02046174 EMBL:AADN02046175 EMBL:AADN02046176
EMBL:AADN02046177 EMBL:AADN02046178 EMBL:AADN02046179
EMBL:AADN02046180 EMBL:AADN02046181 EMBL:AADN02046182
EMBL:AADN02046183 EMBL:AADN02046184 EMBL:AADN02046185
EMBL:AADN02046186 EMBL:AADN02046187 EMBL:AADN02046188
EMBL:AADN02046189 IPI:IPI00585450 Ensembl:ENSGALT00000006998
Uniprot:E1BW97
Length = 1100
Score = 359 (131.4 bits), Expect = 7.3e-54, Sum P(2) = 7.3e-54
Identities = 94/314 (29%), Positives = 157/314 (50%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV+ AV + + + ++ + LV LL + E+QY
Sbjct: 303 LLRNTKPLLQSRNAAVVM-AVAQLYWHLAPKSEAGII-------SKSLVRLLRSNREVQY 354
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + +R + +K F+ + DP +K KLEIM LA++ NI +L EF+
Sbjct: 355 IVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEIMTNLANEANISTLLREFQT 414
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++AIGRCA + + C++ L+ L+ + VV E+++VIK + +
Sbjct: 415 YVKSQDKQFAAATIQAIGRCATNISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQT 474
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD + P A+AS++W+IGEY ER+ A
Sbjct: 475 QPAHHGEIIKHMAKLLDNITVPVARASILWLIGEYCERVPKIAPDVLRKTAKSFTNEDDL 534
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ+L KL+L + + + Q VLN + + D+RDR +L+ + ++
Sbjct: 535 VKLQILNLGAKLYLTNSKQ-TKLLTQYVLNLGKYD-QSYDIRDRTRFIRQLIVPNEKSGA 592
Query: 496 ----AKDVVLAEKP 505
AK + LA+KP
Sbjct: 593 LSKYAKKIFLAQKP 606
Score = 276 (102.2 bits), Expect = 7.3e-54, Sum P(2) = 7.3e-54
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 74 GKNASELFPAVVKNVASKNIEIKKLVYVYLMRYAEEQQDLALLSISTFQRALKDPNQLIR 133
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 134 ASALRVLSSIRVPIIVPIMMLAIKEASSDLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 191
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 192 VIEKLLRDRSTLVAGSVVMAFEEVC--PDR--IDLIHKNYRKLCNLLVDVEEWGQVVIIH 247
Query: 184 ALSRY 188
L+RY
Sbjct: 248 MLTRY 252
>UNIPROTKB|F1PVY2 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9615
"Canis lupus familiaris" [GO:0051138 "positive regulation of NK T
cell differentiation" evidence=IEA] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=IEA] [GO:0048007 "antigen
processing and presentation, exogenous lipid antigen via MHC class
Ib" evidence=IEA] [GO:0032438 "melanosome organization"
evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007596 "blood coagulation" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0007596 PANTHER:PTHR11134
GO:GO:0032438 GeneTree:ENSGT00530000063546 OMA:KRIVGMI
GO:GO:0030123 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 EMBL:AAEX03002125 Ensembl:ENSCAFT00000014640
Uniprot:F1PVY2
Length = 1090
Score = 356 (130.4 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 93/314 (29%), Positives = 157/314 (50%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV++ ++ I+ V + K LV LL + E+QY
Sbjct: 300 LIRNTKPLLQSRNAAVVMAVAQLYWH----ISPKSEVGIISKS----LVRLLRSNREVQY 351
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + +R + +K F+ + DP +K+ KLEI+ LA++ NI +L EF+
Sbjct: 352 IVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKILKLEILTNLANEANISTLLREFQT 411
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++ IGRCA + + C+S L+ L+ + VV E+++VIK + +
Sbjct: 412 YVKSQDKQFAAATIQTIGRCATNISEVTDTCLSGLVCLLSNRDEIVVAESVVVIKKLLQM 471
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD++ P A+AS++W+IGE ER+ A
Sbjct: 472 QPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTNEDDL 531
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ+L KL+L + + + Q +LN + N D+RDR +L+ + ++
Sbjct: 532 VKLQILNLGAKLYLTNSKQ-TKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGA 589
Query: 496 ----AKDVVLAEKP 505
AK + LA+KP
Sbjct: 590 LSKYAKKIFLAQKP 603
Score = 278 (102.9 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 190
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVC--PDR--IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY 188
L+RY
Sbjct: 247 MLTRY 251
Score = 42 (19.8 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKE 318
KM ++I + +DR I+ + +E K+
Sbjct: 894 KMVSIQITLNNTTDRKIENIHIEGKK 919
>RGD|1310256 [details] [associations]
symbol:Ap3b1 "adaptor-related protein complex 3, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006622 "protein targeting to lysosome" evidence=ISO]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=ISO] [GO:0008089
"anterograde axon cargo transport" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0019882 "antigen processing and
presentation" evidence=ISO] [GO:0019903 "protein phosphatase
binding" evidence=ISO] [GO:0030123 "AP-3 adaptor complex"
evidence=IEA] [GO:0032438 "melanosome organization" evidence=ISO]
[GO:0048007 "antigen processing and presentation, exogenous lipid
antigen via MHC class Ib" evidence=ISO] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=ISO] [GO:0051138 "positive
regulation of NK T cell differentiation" evidence=ISO]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 RGD:1310256
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0007596 PANTHER:PTHR11134 GO:GO:0032438 OMA:KRIVGMI
OrthoDB:EOG4H729X GO:GO:0030123 GO:GO:0048007 GO:GO:0051138
GO:GO:0006622 PANTHER:PTHR11134:SF1 EMBL:CH473955 IPI:IPI00360117
UniGene:Rn.11685 Ensembl:ENSRNOT00000014278 UCSC:RGD:1310256
Uniprot:D4AA25
Length = 1096
Score = 351 (128.6 bits), Expect = 7.1e-53, Sum P(3) = 7.1e-53
Identities = 92/314 (29%), Positives = 156/314 (49%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV+ AV + + + V+ + LV LL + E+QY
Sbjct: 298 LIRNTKPLLQSRNAAVVM-AVAQLYWHISPRSEAGVI-------SKSLVRLLRSHREVQY 349
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + +R + +K F+ + DP +K KLEI+ LA++ NI +L EF+
Sbjct: 350 IVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQT 409
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + +
Sbjct: 410 YVRSQDKQFAAATIQTIGRCATSIAEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQM 469
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD++ P A+AS++W+IGE ER+ A
Sbjct: 470 QPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDL 529
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ+L KL+L + + + Q +LN + N D+RDR +L+ + ++
Sbjct: 530 VKLQILNLGAKLYLTNSKQ-TKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGA 587
Query: 496 ----AKDVVLAEKP 505
AK + LA+KP
Sbjct: 588 LSKYAKKIFLAQKP 601
Score = 279 (103.3 bits), Expect = 7.1e-53, Sum P(3) = 7.1e-53
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 190
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVC--PDR--IDLIHRNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY 188
L+RY
Sbjct: 247 MLTRY 251
Score = 45 (20.9 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 551 TDDEDYPNGSEQGYSDAPTH-VADEGASPQTSSSN 584
+DDE+ +G ++ YS P H + P S N
Sbjct: 276 SDDEEKKSGKKKPYSMDPDHRLLIRNTKPLLQSRN 310
Score = 39 (18.8 bits), Expect = 7.1e-53, Sum P(3) = 7.1e-53
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 552 DDEDYPNGSEQGYSDAPTHVADEGASPQTSSSN 584
++ED + S S + D G+S + SS +
Sbjct: 691 EEEDPSDSSSDSESGSGRESGDSGSSSEDSSED 723
>MGI|MGI:1333879 [details] [associations]
symbol:Ap3b1 "adaptor-related protein complex 3, beta 1
subunit" species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0006622 "protein targeting to lysosome" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0006829 "zinc ion
transport" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IMP] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0019882 "antigen processing and presentation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0032438 "melanosome organization"
evidence=ISO] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IMP] [GO:0048490
"anterograde synaptic vesicle transport" evidence=IMP] [GO:0051138
"positive regulation of NK T cell differentiation" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 MGI:MGI:1333879
GO:GO:0005794 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007596 GO:GO:0006897 GO:GO:0008089 GO:GO:0005802
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134 GO:GO:0032438
CTD:8546 GeneTree:ENSGT00530000063546 HOGENOM:HOG000033978
HOVERGEN:HBG050519 KO:K12397 OMA:KRIVGMI OrthoDB:EOG4H729X
GO:GO:0030123 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138
GO:GO:0006622 PANTHER:PTHR11134:SF1 EMBL:AF103809 EMBL:AF255589
EMBL:AF255566 EMBL:AF255567 EMBL:AF255568 EMBL:AF255569
EMBL:AF255570 EMBL:AF255571 EMBL:AF255572 EMBL:AF255573
EMBL:AF255574 EMBL:AF255575 EMBL:AF255576 EMBL:AF255577
EMBL:AF255578 EMBL:AF255579 EMBL:AF255580 EMBL:AF255581
EMBL:AF255582 EMBL:AF255583 EMBL:AF255584 EMBL:AF255585
EMBL:AF255586 EMBL:AF255587 EMBL:AF255588 EMBL:AC122373
EMBL:AC123043 EMBL:BC015068 IPI:IPI00130444 PIR:T18295
RefSeq:NP_033810.2 UniGene:Mm.21185 ProteinModelPortal:Q9Z1T1
SMR:Q9Z1T1 DIP:DIP-49018N IntAct:Q9Z1T1 STRING:Q9Z1T1
PhosphoSite:Q9Z1T1 PaxDb:Q9Z1T1 PRIDE:Q9Z1T1
Ensembl:ENSMUST00000022196 GeneID:11774 KEGG:mmu:11774
UCSC:uc007rlv.2 InParanoid:Q9Z1T1 NextBio:279563 Bgee:Q9Z1T1
CleanEx:MM_AP3B1 Genevestigator:Q9Z1T1
GermOnline:ENSMUSG00000021686 GO:GO:0006829 Uniprot:Q9Z1T1
Length = 1105
Score = 350 (128.3 bits), Expect = 7.6e-53, Sum P(3) = 7.6e-53
Identities = 92/314 (29%), Positives = 154/314 (49%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV+ AV + + + V+ + LV LL + E+QY
Sbjct: 301 LIRNTKPLLQSRNAAVVM-AVAQLYWHISPKSEAGVI-------SKSLVRLLRSNREVQY 352
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + R + +K F+ + DP +K KLEI+ LA++ NI +L EF+
Sbjct: 353 IVLQNIATMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQT 412
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + +
Sbjct: 413 YVRSQDKQFAAATIQTIGRCATSISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQM 472
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD++ P A+AS++W+IGE ER+ A
Sbjct: 473 QPAQHGEIIRHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDL 532
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ+L KL+L + + + Q +LN + N D+RDR +L+ + ++
Sbjct: 533 VKLQILNLAAKLYLTNSKQ-TKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGA 590
Query: 496 ----AKDVVLAEKP 505
AK + LA KP
Sbjct: 591 LSKYAKKIFLAPKP 604
Score = 279 (103.3 bits), Expect = 7.6e-53, Sum P(3) = 7.6e-53
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 190
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVC--PDR--IDLIHRNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY 188
L+RY
Sbjct: 247 MLTRY 251
Score = 40 (19.1 bits), Expect = 7.6e-53, Sum P(3) = 7.6e-53
Identities = 10/49 (20%), Positives = 20/49 (40%)
Query: 535 KPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSS 583
KP + F + + +DED ++ + P+ + + S S S
Sbjct: 671 KPMKKFYSESEEEEDEDEDEDEEEEEKEDEDENPSDSSSDSESGSGSES 719
Score = 37 (18.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 284 CKYNDPIYVKMEKLEIMIKLASDRNIDQV 312
C ++D KM ++I + SDR I+ +
Sbjct: 904 CIFSD----KMVSVQITLTNTSDRKIENI 928
>UNIPROTKB|E5RJ68 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=IEA] [GO:0048007
"antigen processing and presentation, exogenous lipid antigen via
MHC class Ib" evidence=IEA] [GO:0048490 "anterograde synaptic
vesicle transport" evidence=IEA] [GO:0051138 "positive regulation
of NK T cell differentiation" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0007596 PANTHER:PTHR11134
GO:GO:0030123 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 EMBL:AC024568 EMBL:AC024578 EMBL:AC104108
EMBL:AC112197 GeneID:8546 HGNC:HGNC:566 ChiTaRS:AP3B1
IPI:IPI00982231 RefSeq:NP_001258698.1 ProteinModelPortal:E5RJ68
SMR:E5RJ68 PRIDE:E5RJ68 Ensembl:ENST00000519295 ArrayExpress:E5RJ68
Bgee:E5RJ68 Uniprot:E5RJ68
Length = 1045
Score = 347 (127.2 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 91/314 (28%), Positives = 156/314 (49%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV+ AV + + + ++ + LV LL + E+QY
Sbjct: 251 LIRNTKPLLQSRNAAVVM-AVAQLYWHISPKSEAGII-------SKSLVRLLRSNREVQY 302
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + +R + +K F+ + DP +K KLEI+ LA++ NI +L EF+
Sbjct: 303 IVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQT 362
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + +
Sbjct: 363 YVKSQDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQM 422
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD++ P A+AS++W+IGE ER+ A
Sbjct: 423 QPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDL 482
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ+L KL+L + + + Q +LN + N D+RDR +L+ + ++
Sbjct: 483 VKLQILNLGAKLYLTNSKQ-TKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNVKSGA 540
Query: 496 ----AKDVVLAEKP 505
AK + LA+KP
Sbjct: 541 LSKYAKKIFLAQKP 554
Score = 278 (102.9 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 24 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 83
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 84 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 141
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 142 VIEKLLKDKSTLVAGSVVMAFEEVC--PDR--IDLIHKNYRKLCNLLVDVEEWGQVVIIH 197
Query: 184 ALSRY 188
L+RY
Sbjct: 198 MLTRY 202
Score = 41 (19.5 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 552 DDEDYPNGSEQGYSDAPTHVADEGASPQTSSSN 584
++ED + S S++ + ++G S + SN
Sbjct: 632 EEEDSSDSSSDSESESGSESGEQGESGEEGDSN 664
>UNIPROTKB|O00203 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006622 "protein
targeting to lysosome" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0032438 "melanosome organization" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0008089 "anterograde axon cargo transport" evidence=ISS]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS]
Reactome:REACT_11123 InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007596 GO:GO:0006897
GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GO:GO:0032438 CTD:8546 HOGENOM:HOG000033978 HOVERGEN:HBG050519
KO:K12397 OMA:KRIVGMI OrthoDB:EOG4H729X GO:GO:0030123 GO:GO:0048490
GO:GO:0048007 GO:GO:0051138 GO:GO:0006622 PANTHER:PTHR11134:SF1
EMBL:U91931 EMBL:U81504 EMBL:BX538041 EMBL:AC024568 EMBL:AC024578
EMBL:AC104108 EMBL:AC112197 EMBL:BC038444 EMBL:AF247736
IPI:IPI00021129 IPI:IPI00397887 PIR:T50651 PIR:T50652
RefSeq:NP_003655.3 UniGene:Hs.532091 ProteinModelPortal:O00203
SMR:O00203 DIP:DIP-24208N IntAct:O00203 STRING:O00203
PhosphoSite:O00203 PaxDb:O00203 PRIDE:O00203 DNASU:8546
Ensembl:ENST00000255194 GeneID:8546 KEGG:hsa:8546 UCSC:uc003kfj.3
GeneCards:GC05M077296 HGNC:HGNC:566 HPA:HPA038737 MIM:203300
MIM:603401 MIM:608233 neXtProt:NX_O00203 Orphanet:183678
PharmGKB:PA24857 InParanoid:O00203 PhylomeDB:O00203 ChiTaRS:AP3B1
GenomeRNAi:8546 NextBio:32018 ArrayExpress:O00203 Bgee:O00203
CleanEx:HS_AP3B1 Genevestigator:O00203 GermOnline:ENSG00000132842
Uniprot:O00203
Length = 1094
Score = 347 (127.2 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 91/314 (28%), Positives = 156/314 (49%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV+ AV + + + ++ + LV LL + E+QY
Sbjct: 300 LIRNTKPLLQSRNAAVVM-AVAQLYWHISPKSEAGII-------SKSLVRLLRSNREVQY 351
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + +R + +K F+ + DP +K KLEI+ LA++ NI +L EF+
Sbjct: 352 IVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQT 411
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + +
Sbjct: 412 YVKSQDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQM 471
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD++ P A+AS++W+IGE ER+ A
Sbjct: 472 QPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDL 531
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ+L KL+L + + + Q +LN + N D+RDR +L+ + ++
Sbjct: 532 VKLQILNLGAKLYLTNSKQ-TKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNVKSGA 589
Query: 496 ----AKDVVLAEKP 505
AK + LA+KP
Sbjct: 590 LSKYAKKIFLAQKP 603
Score = 278 (102.9 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 190
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVC--PDR--IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY 188
L+RY
Sbjct: 247 MLTRY 251
Score = 41 (19.5 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 552 DDEDYPNGSEQGYSDAPTHVADEGASPQTSSSN 584
++ED + S S++ + ++G S + SN
Sbjct: 681 EEEDSSDSSSDSESESGSESGEQGESGEEGDSN 713
>UNIPROTKB|Q32PG1 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9913
"Bos taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0051138 "positive regulation of NK T cell differentiation"
evidence=IEA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IEA] [GO:0032438
"melanosome organization" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0006622 "protein targeting to lysosome"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0005794 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007596 GO:GO:0006897
GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GO:GO:0032438 EMBL:BC108129 IPI:IPI00698557 RefSeq:NP_001070002.1
UniGene:Bt.8350 ProteinModelPortal:Q32PG1 STRING:Q32PG1
PRIDE:Q32PG1 Ensembl:ENSBTAT00000006605 GeneID:767602
KEGG:bta:767602 CTD:8546 GeneTree:ENSGT00530000063546
HOGENOM:HOG000033978 HOVERGEN:HBG050519 InParanoid:Q32PG1 KO:K12397
OMA:KRIVGMI OrthoDB:EOG4H729X NextBio:20918018 GO:GO:0030123
GO:GO:0048490 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 Uniprot:Q32PG1
Length = 1084
Score = 345 (126.5 bits), Expect = 2.0e-52, Sum P(2) = 2.0e-52
Identities = 90/314 (28%), Positives = 157/314 (50%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV+ AV + + + ++ + LV LL + E+QY
Sbjct: 300 LIRNTKPLLQSRNAAVVM-AVAQLYWHIAPKSEAGII-------SKSLVRLLRSSREVQY 351
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + +R + +K F+ + D +K+ KLEI+ LA++ NI +L EF+
Sbjct: 352 IVLQNIATMSIQRKGMFEPYLKSFYVRSTDATMIKILKLEILTNLANEANISTLLREFQT 411
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++ IGRCA + ++ C++ L+ L+ + VV E+++VIK + +
Sbjct: 412 YVKSQDKQFAAATIQTIGRCATSITEVSDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQM 471
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD++ P A+AS++W+IGE ER+ A
Sbjct: 472 QPMQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKTAKSFTSEDDL 531
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ+L KL+L + + + Q +LN + N D+RDR +L+ + ++
Sbjct: 532 VKLQILNLGAKLYLTNSKQ-TKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGA 589
Query: 496 ----AKDVVLAEKP 505
AK + LA+KP
Sbjct: 590 LSKYAKKIFLAQKP 603
Score = 278 (102.9 bits), Expect = 2.0e-52, Sum P(2) = 2.0e-52
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 190
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 191 IIEKLLKDKSTLVAGSVVMAFEEVC--PDR--IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY 188
L+RY
Sbjct: 247 MLTRY 251
>UNIPROTKB|K7ERB2 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000589774 Uniprot:K7ERB2
Length = 151
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 97/111 (87%), Positives = 109/111 (98%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDI 111
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DI
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDI 151
>UNIPROTKB|F1S2G1 [details] [associations]
symbol:F1S2G1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 OMA:KRIVGMI
GO:GO:0030123 PANTHER:PTHR11134:SF1 EMBL:CU462946 EMBL:CU657913
Ensembl:ENSSSCT00000015403 Uniprot:F1S2G1
Length = 1058
Score = 326 (119.8 bits), Expect = 3.0e-50, Sum P(2) = 3.0e-50
Identities = 79/275 (28%), Positives = 140/275 (50%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ N AVV++ ++ + ++V + K PLV LL + E+QY
Sbjct: 265 LIRNTKPLLQSRNAAVVMAVAQLY---WHIAPKSEV--GIISK---PLVRLLRSNREVQY 316
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
+ L+NI + +R + +K F+ + DP +K+ KLEI+ LA++ NI +L EF+
Sbjct: 317 IVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKILKLEILTNLANEANISTLLREFQT 376
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y D F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + +
Sbjct: 377 YVKSQDKQFAAATIQTIGRCATNISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQM 436
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II + + LD++ P A+AS++W+IGE ER+ A
Sbjct: 437 QPIQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPIIAPDVLRKMAKSFTSEDDL 496
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVE 472
V+LQ+L KL+L + + + + +L N ++
Sbjct: 497 VKLQILNLGAKLYLTNSRQD-KDLEEGLLKNIKID 530
Score = 278 (102.9 bits), Expect = 3.0e-50, Sum P(2) = 3.0e-50
Identities = 67/185 (36%), Positives = 99/185 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 38 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 97
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 98 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEM--LIE 155
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D R ++ KL L + EWGQV I+
Sbjct: 156 IIEKLLKDKSTLVAGSVVMAFEEVC--PDR--IDLIHKNYRKLCNLLVDVEEWGQVVIIH 211
Query: 184 ALSRY 188
L+RY
Sbjct: 212 MLTRY 216
Score = 52 (23.4 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 35/144 (24%), Positives = 61/144 (42%)
Query: 246 LVTLLSAEPEIQYV-ALRNINLIVQRRPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKL 303
LV LLS EI ++ I ++Q +P + H EI K D I V + + I+ +
Sbjct: 411 LVCLLSNRDEIVVAESVVVIKKLLQMQP--IQHGEIIKHMAKLLDSITVPVARASILWLI 468
Query: 304 ASDRN-----IDQVLLEFKEYATEVDVDFVRKAVRAIG-RCAIKLERAAERCISVLLELI 357
+ VL + + T D D V+ + +G + + R + LL+ I
Sbjct: 469 GENCERVPIIAPDVLRKMAKSFTSED-DLVKLQILNLGAKLYLTNSRQDKDLEEGLLKNI 527
Query: 358 KIKVNYVVQEAIIVIKDIFRRYPN 381
KI YV+ + ++ R +P+
Sbjct: 528 KIDECYVLYDRVVFSNQTVRPHPS 551
>DICTYBASE|DDB_G0274003 [details] [associations]
symbol:ap3b-2 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IEA;IDA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 dictyBase:DDB_G0274003
dictyBase:DDB_G0272578 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0006897
GenomeReviews:CM000151_GR GO:GO:0010008 EMBL:AAFI02000011
EMBL:AAFI02000009 eggNOG:COG5096 PANTHER:PTHR11134 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 RefSeq:XP_644360.1
RefSeq:XP_645054.1 ProteinModelPortal:Q556J8 STRING:Q556J8
PRIDE:Q556J8 EnsemblProtists:DDB0237724 EnsemblProtists:DDB0238781
GeneID:8618729 GeneID:8619247 KEGG:ddi:DDB_G0272578
KEGG:ddi:DDB_G0274003 OMA:FSDEHES ProtClustDB:CLSZ2729218
Uniprot:Q556J8
Length = 1108
Score = 287 (106.1 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 66/194 (34%), Positives = 107/194 (55%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G+DVS F VV + +NLE+KKLVY+YL++YA+SQ D A+L++NT K D +
Sbjct: 49 LSKGRDVSEAFPQVVKNVIVKNLEIKKLVYMYLVHYAESQNDSALLSINTIQKSLNDQSQ 108
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IRA A+R M IRV I E + +++ +KD P+VRK AA +AK++ ++ + E
Sbjct: 109 VIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIAKVHKLDCDKQEP-- 166
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ L+ L++D R F++ K+ L + EW QV
Sbjct: 167 LIDLLEILLNDTSTMVLGAAIVAFNELC--PQR--FDLLHQHYRKICQLLADFDEWSQVI 222
Query: 181 ILDALSRYKAADAR 194
+LD L++Y + R
Sbjct: 223 VLDILTKYARSQFR 236
Score = 250 (93.1 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 61/180 (33%), Positives = 98/180 (54%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
+++ P LQ N AVV++ + I + +K+ LV +L + PE+QY
Sbjct: 297 LLKSTLPLLQSRNNAVVMAVSSLYFYCAPSIEA--------QKVGKSLVRILRSGPEVQY 348
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIY-VKMEKLEIMIKLASDRNIDQVLLEFK 317
+ L NI+ +V RP++ + FF +DP Y +K+ KLEI+ +LA+ NI ++L EFK
Sbjct: 349 ITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKL-KLEILTRLATPENIGKILKEFK 407
Query: 318 EYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFR 377
EY D FV ++AIG CA + E CI L+ L+ + VV E++IV+K + +
Sbjct: 408 EYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLSNQSTVVVAESVIVLKRLLQ 467
Score = 107 (42.7 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 31/94 (32%), Positives = 44/94 (46%)
Query: 383 YESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQVQLQ 441
Y++II L + LDTL P A+AS++W+IGEY R+ A V+L+
Sbjct: 507 YDNIILHLSKLLDTLQVPSARASIVWVIGEYCYRVPLVAPDVFRKLVKSFSDEHESVKLE 566
Query: 442 LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
L KL+ +Q NN+T TDN
Sbjct: 567 TLNLGSKLY-----------VQFTDNNSTTTTDN 589
Score = 44 (20.5 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 27/111 (24%), Positives = 47/111 (42%)
Query: 283 FCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAI-- 340
+C Y P+ V + ++K SD + + V LE +++ V F +I
Sbjct: 537 YC-YRVPL-VAPDVFRKLVKSFSDEH-ESVKLETLNLGSKLYVQFTDNNSTTTTDNSIPN 593
Query: 341 --KLERAAERC---ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESI 386
K ER E+ +L L K NY +++ ++K + NT +SI
Sbjct: 594 EFKNERTKEKITLMFQYVLNLAKFDQNYDIRDNSRMLKHFYFNTENT-QSI 643
Score = 37 (18.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 457 GPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPE 494
GP+ + N +T+ T P + + + + S+DPE
Sbjct: 343 GPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPE 380
>DICTYBASE|DDB_G0272578 [details] [associations]
symbol:ap3b-1 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IEA;IDA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 dictyBase:DDB_G0274003
dictyBase:DDB_G0272578 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0006897
GenomeReviews:CM000151_GR GO:GO:0010008 EMBL:AAFI02000011
EMBL:AAFI02000009 eggNOG:COG5096 PANTHER:PTHR11134 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 RefSeq:XP_644360.1
RefSeq:XP_645054.1 ProteinModelPortal:Q556J8 STRING:Q556J8
PRIDE:Q556J8 EnsemblProtists:DDB0237724 EnsemblProtists:DDB0238781
GeneID:8618729 GeneID:8619247 KEGG:ddi:DDB_G0272578
KEGG:ddi:DDB_G0274003 OMA:FSDEHES ProtClustDB:CLSZ2729218
Uniprot:Q556J8
Length = 1108
Score = 287 (106.1 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 66/194 (34%), Positives = 107/194 (55%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G+DVS F VV + +NLE+KKLVY+YL++YA+SQ D A+L++NT K D +
Sbjct: 49 LSKGRDVSEAFPQVVKNVIVKNLEIKKLVYMYLVHYAESQNDSALLSINTIQKSLNDQSQ 108
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IRA A+R M IRV I E + +++ +KD P+VRK AA +AK++ ++ + E
Sbjct: 109 VIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIAKVHKLDCDKQEP-- 166
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ L+ L++D R F++ K+ L + EW QV
Sbjct: 167 LIDLLEILLNDTSTMVLGAAIVAFNELC--PQR--FDLLHQHYRKICQLLADFDEWSQVI 222
Query: 181 ILDALSRYKAADAR 194
+LD L++Y + R
Sbjct: 223 VLDILTKYARSQFR 236
Score = 250 (93.1 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 61/180 (33%), Positives = 98/180 (54%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
+++ P LQ N AVV++ + I + +K+ LV +L + PE+QY
Sbjct: 297 LLKSTLPLLQSRNNAVVMAVSSLYFYCAPSIEA--------QKVGKSLVRILRSGPEVQY 348
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIY-VKMEKLEIMIKLASDRNIDQVLLEFK 317
+ L NI+ +V RP++ + FF +DP Y +K+ KLEI+ +LA+ NI ++L EFK
Sbjct: 349 ITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKL-KLEILTRLATPENIGKILKEFK 407
Query: 318 EYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFR 377
EY D FV ++AIG CA + E CI L+ L+ + VV E++IV+K + +
Sbjct: 408 EYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLSNQSTVVVAESVIVLKRLLQ 467
Score = 107 (42.7 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 31/94 (32%), Positives = 44/94 (46%)
Query: 383 YESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQVQLQ 441
Y++II L + LDTL P A+AS++W+IGEY R+ A V+L+
Sbjct: 507 YDNIILHLSKLLDTLQVPSARASIVWVIGEYCYRVPLVAPDVFRKLVKSFSDEHESVKLE 566
Query: 442 LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
L KL+ +Q NN+T TDN
Sbjct: 567 TLNLGSKLY-----------VQFTDNNSTTTTDN 589
Score = 44 (20.5 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 27/111 (24%), Positives = 47/111 (42%)
Query: 283 FCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAI-- 340
+C Y P+ V + ++K SD + + V LE +++ V F +I
Sbjct: 537 YC-YRVPL-VAPDVFRKLVKSFSDEH-ESVKLETLNLGSKLYVQFTDNNSTTTTDNSIPN 593
Query: 341 --KLERAAERC---ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESI 386
K ER E+ +L L K NY +++ ++K + NT +SI
Sbjct: 594 EFKNERTKEKITLMFQYVLNLAKFDQNYDIRDNSRMLKHFYFNTENT-QSI 643
Score = 37 (18.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 457 GPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPE 494
GP+ + N +T+ T P + + + + S+DPE
Sbjct: 343 GPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPE 380
>UNIPROTKB|H7C034 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AC000041 EMBL:AC002059 HGNC:HGNC:554 ChiTaRS:AP1B1
ProteinModelPortal:H7C034 PRIDE:H7C034 Ensembl:ENST00000415756
Uniprot:H7C034
Length = 173
Score = 473 (171.6 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 89/108 (82%), Positives = 103/108 (95%)
Query: 311 QVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII 370
QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+ KVNYVVQEAI+
Sbjct: 66 QVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIV 125
Query: 371 VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 126 VIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 173
Score = 41 (19.5 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 298 EIMIKLASDRNIDQ 311
+IMI+LAS NI Q
Sbjct: 2 DIMIRLASQANIAQ 15
>WB|WBGene00000163 [details] [associations]
symbol:apb-3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030123 "AP-3 adaptor complex"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0007040 "lysosome organization"
evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0009792 GO:GO:0040007 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0016192 GO:GO:0010171 GO:GO:0007040 GO:GO:0019915
eggNOG:COG5096 PANTHER:PTHR11134 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:RVPVISQ EMBL:Z83122
RefSeq:NP_492170.2 ProteinModelPortal:O45718 SMR:O45718
PaxDb:O45718 PRIDE:O45718 EnsemblMetazoa:R11A5.1a.1
EnsemblMetazoa:R11A5.1a.2 GeneID:172553 KEGG:cel:CELE_R11A5.1
UCSC:R11A5.1b CTD:172553 WormBase:R11A5.1a ArrayExpress:O45718
Uniprot:O45718
Length = 945
Score = 504 (182.5 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 146/525 (27%), Positives = 256/525 (48%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GKDVS LF VV + +N+ELKKLV++YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 57 GKDVSELFAAVVKNVAAKNVELKKLVFVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 116
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A+R + IRV + + ++ ++D PYVRK AA + KLY + EL E + ++
Sbjct: 117 GSALRVLTSIRVPMVAPIMLLAIKDAVRDMSPYVRKVAAHAIPKLYSLEPEL-EPQ-LVD 174
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
+ L++D ++ L L + EWGQ+ +++
Sbjct: 175 CIDFLLADRRSLVLGSAVYAFDEICPHR----LDLLHKHFRALCRGLADVDEWGQIVMIN 230
Query: 184 ALSRYKAADAREAEN---------IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
L+RY + + + ++ P LQ NC+VV++ V++ + +
Sbjct: 231 MLTRYARHELADPDRGPPDTDVVLLLNSARPLLQSRNCSVVMAVVQLFYHVAPKAQLSQI 290
Query: 235 VRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRP----------TILAHEIKVFFC 284
R LV LL E QYV L NI I +R P T+ +K FF
Sbjct: 291 AR--------ALVRLLRGPRETQYVVLTNIATICERNPVEEGTYAISKTMFDPFLKSFFV 342
Query: 285 KYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLER 344
+ D VK KL ++ L S+ N+ +L E + Y D+ AV AIGRCA+++
Sbjct: 343 RSCDSSLVKKLKLHVLTSLVSEANVHIILRELQTYVHMSDL--ASPAVEAIGRCAVRVGA 400
Query: 345 AAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
+++C++ L++LI VV A++VIK + + + ++++ L + + +A+A
Sbjct: 401 VSDQCMTGLVQLISSSDEKVVCSAVVVIKRLL--HASAPLNLLSRLMRLMPNMIAAQARA 458
Query: 405 SMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQ 463
+IW++ + E++ + A V+L+ L VKL+L K + ++++Q
Sbjct: 459 CVIWLVATHVEQVLHMAPDFLRLIAKKFSTENELVKLEALKLAVKLWLVKRDDS-EKIVQ 517
Query: 464 VVLNNATVETDNPDLRDRAYIYWRLL-STD--PEAAKDVVLAEKP 505
V A + D+RDR L+ +T+ + +++ +++KP
Sbjct: 518 YVFQLARFDLSY-DVRDRCRFLRNLMFNTEILSQHMEEIFMSKKP 561
>UNIPROTKB|B7ZKR7 [details] [associations]
symbol:AP3B2 "AP3B2 protein" species:9606 "Homo sapiens"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] [GO:0044431 "Golgi apparatus
part" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041
InterPro:IPR008153 GO:GO:0005634 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 Gene3D:2.60.40.1230 GO:GO:0044431
HOVERGEN:HBG050519 GO:GO:0030123 PANTHER:PTHR11134:SF1
IPI:IPI01011317 UniGene:Hs.199593 HGNC:HGNC:567 EMBL:AC105339
EMBL:FJ695193 EMBL:BC143342 SMR:B7ZKR7 STRING:B7ZKR7
Ensembl:ENST00000535348 UCSC:uc010uoj.2 Uniprot:B7ZKR7
Length = 1050
Score = 375 (137.1 bits), Expect = 7.5e-45, Sum P(2) = 7.5e-45
Identities = 109/398 (27%), Positives = 189/398 (47%)
Query: 199 IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY 258
++ P LQ + AVV++ ++ L +V +A LV LL + E+QY
Sbjct: 273 LLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSEVQY 324
Query: 259 VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
V L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 325 VVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQT 384
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR 378
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 385 YIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQM 444
Query: 379 YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADXXXXXXXXXXXXXXAQ 437
P + II L + D + P A+AS++W+IGEY E + A
Sbjct: 445 QPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDI 504
Query: 438 VQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA-- 495
V+LQ++ KL+L + + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 505 VKLQVINLAAKLYLTNSKQ-TKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGGA 562
Query: 496 ----AKDVVLAEKP--VISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTAS 549
AK + LA KP V+ D L L + ++ Y + P+ +
Sbjct: 563 LSRHAKKLFLAPKPAPVLESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVR 622
Query: 550 RTDDEDYP---NGSEQGYSDAPTHVADEGASPQTSSSN 584
+ ++ N ++ + P + EG S T S++
Sbjct: 623 NVEVPEWTKCSNREKRKEKEKPFYSDSEGESGPTESAD 660
Score = 171 (65.3 bits), Expect = 7.5e-45, Sum P(2) = 7.5e-45
Identities = 52/167 (31%), Positives = 80/167 (47%)
Query: 23 LELKKLVYLYLINYAKSQPDLAILAV-NTFVKDSQDPNPLIRALAVRTMGCIRVDKITEY 81
LE K + + +I K+ DL V N K+ +DPN LIRA A+R + IRV I
Sbjct: 55 LEAMKRI-VAMIARGKNASDLFPAVVKNVACKNIEDPNQLIRASALRVLSSIRVPIIVPI 113
Query: 82 LCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDXXXXXXXXXX 141
+ ++ D PYVRKTAA + KLY ++++ +D+ +E ++ L++D
Sbjct: 114 MMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVV 171
Query: 142 XXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRY 188
R ++ KL L + EWGQV I+ L+RY
Sbjct: 172 MAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQVVIISMLTRY 214
Score = 45 (20.9 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 23/119 (19%), Positives = 52/119 (43%)
Query: 4 GKDVSSLFTDVVNCMQTENLE-LKKLVYLYLINYAKS--QPDLAILAVNTFVKDSQDPNP 60
GK+ S LF VV + +N+E +L+ + S P + + + + + D +P
Sbjct: 68 GKNASDLFPAVVKNVACKNIEDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSP 127
Query: 61 LIR---ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELV 116
+R A A+ + + D+ + L + +++ L D V + + ++ +L+
Sbjct: 128 YVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLI 185
Score = 39 (18.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 23/104 (22%), Positives = 40/104 (38%)
Query: 472 ETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSS 531
E +P +R+ W S + E K+ EKP SD + P+ E A+ S
Sbjct: 615 EAPDPSVRNVEVPEWTKCS-NREKRKE---KEKPFYSDSEGESGPT---ES-ADSDPESE 666
Query: 532 VYHKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEG 575
+ + ++S +D+ED E+G ++G
Sbjct: 667 SESDSKSSSESGSGESSSESDNEDQDEDEEKGRGSESEQSEEDG 710
>UNIPROTKB|D4A3Q4 [details] [associations]
symbol:Ap4b1 "Protein Ap4b1" species:10116 "Rattus
norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 RGD:1310529 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 PANTHER:PTHR11134 IPI:IPI00951398
Ensembl:ENSRNOT00000066724 ArrayExpress:D4A3Q4 Uniprot:D4A3Q4
Length = 664
Score = 461 (167.3 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 132/498 (26%), Positives = 237/498 (47%)
Query: 59 NPLIRA--LAVRTM--GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAE 114
NP I+A L R + IR+ + EY+ P+ L+D YVR+ A + AK+++++ +
Sbjct: 19 NPHIQADRLRYRNVIQRVIRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGD 78
Query: 115 LVEDRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECT 174
D + L L+ D + I LL +++
Sbjct: 79 SEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLD 136
Query: 175 EWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITST 232
+WGQ +L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL + T
Sbjct: 137 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPHVQT 196
Query: 233 DVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYV 292
DV L + P L S E+ + AL ++ ++ P + K FFC Y++P Y+
Sbjct: 197 DV---LVRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYI 253
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
K++K+E++ +L +D N+ QVL E + Y T+V DF + A+ AIG A + ++C+ +
Sbjct: 254 KLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGNIA---KTYTDQCVQI 310
Query: 353 LLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWII 410
L EL+ ++ ++ + +D+ P E++ L CE + + + E K ++IW++
Sbjct: 311 LTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLL 368
Query: 411 GEYAERIDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNA 469
G + E+I NA V+++LLTA ++LFL +P E + +++L
Sbjct: 369 GVHGEKIPNAPYVLEDFVESVKSETFPAVKMELLTALMRLFLSRPAECQDVLGRLLLYCI 428
Query: 470 TVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL---DPSL-LDELLAN 525
E D +RDR Y+RLL + K ++ + K SD S L P ++ ++
Sbjct: 429 EEEKDMA-VRDRGLFYYRLLLVGIDKTKQILCSPK---SDPSLGLLEDQPERPVNSWASD 484
Query: 526 IATLSSVYHKPPEAFVTR 543
TL+ VY K A +++
Sbjct: 485 FNTLAPVYGKAHWATISK 502
>UNIPROTKB|B7Z4X3 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL137856 UniGene:Hs.515048 HGNC:HGNC:572 HOVERGEN:HBG106066
EMBL:AK298037 IPI:IPI00922864 SMR:B7Z4X3 STRING:B7Z4X3
Ensembl:ENST00000369566 UCSC:uc010owq.2 Uniprot:B7Z4X3
Length = 302
Score = 261 (96.9 bits), Expect = 6.0e-41, Sum P(2) = 6.0e-41
Identities = 58/173 (33%), Positives = 97/173 (56%)
Query: 170 LNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQME 227
+++ +WGQ +L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL +M
Sbjct: 114 MSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMF 173
Query: 228 LITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYN 287
TDV L + P L S E+ +VAL ++ I+ P + K FFC Y+
Sbjct: 174 PHVQTDV---LVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYS 230
Query: 288 DPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAI 340
+P Y+K++K+E++ +L +D N+ QVL E + Y T+V DF + A+ AIGRC +
Sbjct: 231 EPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGRCLL 283
Score = 206 (77.6 bits), Expect = 6.0e-41, Sum P(2) = 6.0e-41
Identities = 38/81 (46%), Positives = 57/81 (70%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEY 81
++R LA+R+M +R+ K+ ++
Sbjct: 100 MVRGLALRSMCSLRMSKLDQW 120
>POMBASE|SPAC23H3.06 [details] [associations]
symbol:apl6 "AP-3 adaptor complex subunit Apl6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006896 "Golgi
to vacuole transport" evidence=ISO] [GO:0030123 "AP-3 adaptor
complex" evidence=ISO] [GO:0030665 "clathrin-coated vesicle
membrane" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PomBase:SPAC23H3.06 GO:GO:0005829 GO:GO:0005634 GO:GO:0006886
EMBL:CU329670 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CU329670_GR eggNOG:COG5096 GO:GO:0030665
PANTHER:PTHR11134 GO:GO:0006896 KO:K12397 GO:GO:0030123
PANTHER:PTHR11134:SF1 PIR:T38299 RefSeq:NP_593796.1
ProteinModelPortal:O13939 EnsemblFungi:SPAC23H3.06.1 GeneID:2541771
KEGG:spo:SPAC23H3.06 OMA:RVPVISQ OrthoDB:EOG44F9J9 NextBio:20802862
Uniprot:O13939
Length = 745
Score = 427 (155.4 bits), Expect = 6.9e-41, Sum P(2) = 6.9e-41
Identities = 145/527 (27%), Positives = 239/527 (45%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
M G+++S F DVV + +EN E+++LV++YL+ YA+ PDLA+L+VNT K D NP
Sbjct: 61 MMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQYAEFNPDLALLSVNTVQKTLYDKNP 120
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
L R+ A+R M IRV I + +Q+C+ D VR++AA+ + K Y ++
Sbjct: 121 LTRSTAIRVMSSIRVPAINGIVLLAIQQCITDTADRVRQSAALAITKCYSLDPSYKSQ-- 178
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
E +K L+SD EI ++ T + +W +V
Sbjct: 179 LEEHIKTLLSDNSPIVVPAALFTFEVVCPEK----LEIIHPYYHRICTLFPQMNDWDKVV 234
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV----- 235
L L RY AR + E TP H++ +L ++K L+ ST +
Sbjct: 235 ALKTLVRY----ARLT--LPEPSTPST-HSDLKELLESIKSCF--FSLLPSTIIAGARAF 285
Query: 236 -----RNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPI 290
N + PL+ LL +P ++ LR I+ IV + P + + IK FF +D
Sbjct: 286 YYLAPSNQMHLIVEPLLQLLLEKPIVRTTTLRYISQIVYKTPELFKNHIKSFFLIASDSD 345
Query: 291 YVKMEKLEIMIKLASDRNIDQVLLEFKEYA-TEVDVDFVRKAVRAIGRCAIKLERAAERC 349
+ K+ I+ +L +N Q+L E Y + + AV+A+G A A C
Sbjct: 346 DTCLLKINILSRLLDAQNSSQILPELLYYINSHPNPSVASTAVKALGDFASANISMAPSC 405
Query: 350 ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWI 409
++ LL L+K + +V EA ++ + P E + L + +TL+ P AK+ +W+
Sbjct: 406 LNTLLLLLKSHNSLIVTEAASSLRLLIHNDPK--EIYLQYLAATYETLEVPRAKSVTLWL 463
Query: 410 IGEYAERIDN-ADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQ-------M 461
I E+ I +V+ Q+L +V+L++ +E Q +
Sbjct: 464 ISEHILIIPRLVPDVLRIAVKTFADETLEVKYQILELSVRLYVLSHSEEKQNDLESRDDV 523
Query: 462 IQVVLNN--ATVETD-NPDLRDRAYIYWRLLST-DPEAAKDVVLAEK 504
+ ++ N + + D + DLRDRA Y L ST E + +VL K
Sbjct: 524 VSLLFNYVLSLIHFDMSYDLRDRARFYKELASTPSSEFTRRIVLESK 570
Score = 37 (18.1 bits), Expect = 6.9e-41, Sum P(2) = 6.9e-41
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 528 TLSSVY-HKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSS 582
TL Y + E+ +T+ S ++DE+ + S++ ++ + ++ + TSS
Sbjct: 669 TLEEFYASETSESSEGEYETSTSESEDEETDDTSQEEDNEKNSTPDEDTENNNTSS 724
>UNIPROTKB|K7EN71 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000593014 Uniprot:K7EN71
Length = 132
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 81/92 (88%), Positives = 90/92 (97%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKD 92
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKD 132
>TAIR|locus:2099961 [details] [associations]
symbol:PAT2 "protein affected trafficking 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0080171 "lytic
vacuole organization" evidence=IMP] [GO:0006896 "Golgi to vacuole
transport" evidence=IMP] [GO:0051453 "regulation of intracellular
pH" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 EMBL:CP002686 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 KO:K12397 GO:GO:0030123 PANTHER:PTHR11134:SF1
GO:GO:0080171 IPI:IPI00938719 RefSeq:NP_974443.4 UniGene:At.26631
UniGene:At.35023 ProteinModelPortal:F4IWW1 SMR:F4IWW1 PRIDE:F4IWW1
EnsemblPlants:AT3G55480.2 GeneID:824714 KEGG:ath:AT3G55480
OMA:PVIVPIM Uniprot:F4IWW1
Length = 1115
Score = 284 (105.0 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 65/188 (34%), Positives = 100/188 (53%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
G DVS+ F VV + +++ E+KKLVYLYL+ YA+ +P+ A+L++N F KD DPNPL+R
Sbjct: 63 GFDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSINYFQKDLGDPNPLVR 122
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+RTM IR+ I + +C +D YVR+ AA + KL+D+ E E +E
Sbjct: 123 AWALRTMAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDLRLE--EHASAIE 180
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
L ++ + ++ F++ KL L + EWGQ+ ++
Sbjct: 181 ELVGILLNDHSPGVVGAAAAAFTSICPNN---FKLIGKNYKKLCQILPDVEEWGQILLIG 237
Query: 184 ALSRYKAA 191
L RY A
Sbjct: 238 TLLRYVVA 245
Score = 232 (86.7 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 74/257 (28%), Positives = 128/257 (49%)
Query: 171 NECTEW-GQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSA--VKMILQQME 227
+ CT+ F D A + + +++ +P L N AVVL+A V+ I+ +E
Sbjct: 312 SSCTDTVSSAF--DTKETTSIAHNEDVKILLQCTSPLLWSNNSAVVLAAAGVQWIMAPLE 369
Query: 228 LITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYN 287
DV KK+ PL+ LL + +YV L NI + + P++ A + FF +
Sbjct: 370 -----DV-----KKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFENFFICSS 419
Query: 288 DPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAE 347
D VK KLE++ +A+ +I +L EF++Y + D F V AIG CA +L
Sbjct: 420 DAYQVKAYKLEMLSLIATTSSIASILREFEDYIKDPDRRFAADTVAAIGLCAKRLMTIPT 479
Query: 348 RCISVLLELIKIKV---NY--------VVQEAIIVIKDIFRRYPNTYESIIATLCESLDT 396
C+ LL L++ + ++ V+ +A++ I+ + R P +E ++ L SLD+
Sbjct: 480 TCLDGLLALVRQESFAGDFESADGEAGVLVQAVMSIQTMIERDPLRHEKVLIQLFRSLDS 539
Query: 397 LDEPEAKASMIWIIGEY 413
+ A+A++IW++G Y
Sbjct: 540 IKVAAARATIIWMVGVY 556
>UNIPROTKB|B1ALD0 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 EMBL:AL137856 UniGene:Hs.515048 HGNC:HGNC:572
HOGENOM:HOG000294128 HOVERGEN:HBG050521 IPI:IPI00514624 SMR:B1ALD0
STRING:B1ALD0 Ensembl:ENST00000369567 UCSC:uc001eea.1
Uniprot:B1ALD0
Length = 571
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 115/394 (29%), Positives = 200/394 (50%)
Query: 170 LNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQME 227
+++ +WGQ +L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL +M
Sbjct: 39 MSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMF 98
Query: 228 LITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYN 287
TDV L + P L S E+ +VAL ++ I+ P + K FFC Y+
Sbjct: 99 PHVQTDV---LVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYS 155
Query: 288 DPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAE 347
+P Y+K++K+E++ +L +D N+ QVL E + Y T+V DF + A+ AIG A +
Sbjct: 156 EPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTD 212
Query: 348 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKAS 405
+C+ +L EL+ ++ ++ + +D+ P E++ L CE + + + E K +
Sbjct: 213 QCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQA 270
Query: 406 MIWIIGEYAERIDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQV 464
+IW++G + ERI NA V+++LLTA ++LFL +P E Q M+
Sbjct: 271 LIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPAEC-QDMLGR 329
Query: 465 VLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL--DPSL--LD 520
+L E + +RDR Y+RLL + K ++ + K SD + L DP+ ++
Sbjct: 330 LLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPK---SDPTLGLLEDPAERPVN 386
Query: 521 ELLANIATLSSVYHKPPEAFVTRVKTTASRTDDE 554
++ TL VY K A +++ + A R D E
Sbjct: 387 SWASDFNTLVPVYGKAHWATISKCQG-AERCDPE 419
>ASPGD|ASPL0000055849 [details] [associations]
symbol:AN0165 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006896 "Golgi to
vacuole transport" evidence=IEA] [GO:0006623 "protein targeting to
vacuole" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
EMBL:BN001308 PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1
OMA:LLHGHFR EnsemblFungi:CADANIAT00002572 HOGENOM:HOG000175744
Uniprot:C8VQ45
Length = 841
Score = 256 (95.2 bits), Expect = 2.7e-39, Sum P(3) = 2.7e-39
Identities = 61/211 (28%), Positives = 112/211 (53%)
Query: 207 LQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINL 266
LQ N AV+++ V+ + T+ + PLV LL + ++Q++AL NI +
Sbjct: 307 LQSRNAAVIVAVVRCYFY----LAPTEYLG----AAVGPLVALLRSPQDMQHIALYNIVV 358
Query: 267 IVQRRPTILAHEIKVFFCKYNDPIYV---KMEKLEIMIKLASDRNIDQVLLEFKEYATEV 323
+ R P + F +DP ++ K+E L I+ + + ++ E + +A
Sbjct: 359 VALRYPKPFTKYVSHFLVHASDPPHIWRLKLEALTILFPHCGNHFKNLIISELEHFAQGA 418
Query: 324 DVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTY 383
D D VR++VRA+GRCA AA++C+ +LL I + +V E++ VI+ + + P ++
Sbjct: 419 DPDLVRESVRALGRCAQGDPNAADKCLRILLNQITSLDDTLVSESLTVIRHLIQHDPGSH 478
Query: 384 ESIIATLCESLDTLDEPEAKASMIWIIGEYA 414
E + L + L P+A+A+++W++GEYA
Sbjct: 479 ERTVIQLVKYLGLTTNPDARATIVWLVGEYA 509
Score = 230 (86.0 bits), Expect = 2.7e-39, Sum P(3) = 2.7e-39
Identities = 62/179 (34%), Positives = 95/179 (53%)
Query: 11 FTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTM 70
F+ VV + + NLE+KKLVY+YL+++A+++PDLA+L++N K D NP RA+A+RTM
Sbjct: 78 FSAVVKNVASANLEVKKLVYIYLVHHAEAEPDLALLSINAIQKSLTDQNPQARAMALRTM 137
Query: 71 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDR-GFLESLKDLI 129
IRV I + + ++R D P+VRK AA+ + K Y ++ G++E+L +
Sbjct: 138 ASIRVPVINQIVSLAIKRGCGDMSPHVRKAAALAIPKCYRLDPSTQPQLIGYIETL---L 194
Query: 130 SDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRY 188
D R I I H S L+ L + EWGQ+ L L+ Y
Sbjct: 195 GDTQYFVAGPAVAAFLEVC--PDR-IDLIHKHYRS-LVKKLVDMDEWGQLATLRLLTFY 249
Score = 60 (26.2 bits), Expect = 2.7e-39, Sum P(3) = 2.7e-39
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 477 DLRDRAYIYWRLLST--DPEAAKDVVLAEKPV 506
DLRDRA +Y LLS+ + A ++LA KPV
Sbjct: 625 DLRDRARLYKALLSSPSSTQIANLLLLAPKPV 656
>UNIPROTKB|F1NY20 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=IEA] InterPro:IPR002553 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005802 GO:GO:0030131
PANTHER:PTHR11134 GeneTree:ENSGT00530000063138 EMBL:AADN02045017
IPI:IPI00588021 Ensembl:ENSGALT00000040096 ArrayExpress:F1NY20
Uniprot:F1NY20
Length = 534
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 106/375 (28%), Positives = 188/375 (50%)
Query: 175 EWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITST 232
+WGQ +L L RY+ E NI+ + L+ ++ +VV++A K+ +L +
Sbjct: 6 QWGQSEVLAFLLRYRPRSEEELFNILSLLDGYLKSSSPSVVMAATKLFLVLAREYPHVQA 65
Query: 233 DVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYV 292
DV L + P L S E+ + AL ++ I+ P + K FFC Y++P Y+
Sbjct: 66 DV---LVRVKGPLLAACTSESRELCFTALCHVRQILSSLPGHFSSHYKKFFCSYSEPHYI 122
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
K +K+E++ +L +D N+ QVL E K Y T++ V+ + A+ AIG A E+C+ +
Sbjct: 123 KCQKMEVLCELVNDENVQQVLEELKGYCTDISVELAQGAISAIGSIA---RTYTEQCVGI 179
Query: 353 LLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATL--CESLDTLDEPEAKASMIWII 410
L EL+ ++ ++ + +D+ P +++ L CE D + + E K ++IW++
Sbjct: 180 LTELLGLQQEHITSAVVQAFRDLVWLCPQCTDAVCQALPGCE--DIIQDSEGKQALIWLL 237
Query: 411 GEYAERIDNADXXXXXXXXXXXXXX-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNA 469
G + E++ NA V+++LLTA V+LFL +P E Q M+ +L +
Sbjct: 238 GAHGEKVPNAPYVLEDFVENVKTEVFPAVKMELLTALVRLFLSRPAEC-QDMLGRLLYHC 296
Query: 470 TVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEK--PVISDDSNQLDPSLLDELLANIA 527
E + +RDR Y+RLL + + K V+ + K P + +Q + + + +
Sbjct: 297 IEEEKDMSVRDRGLFYYRLLQSGVDEVKRVLCSPKSDPSLGLLEDQTEQPV-NTWASEFN 355
Query: 528 TLSSVYHKPPEAFVT 542
TL+ +Y K A VT
Sbjct: 356 TLAPIYGKARWALVT 370
>UNIPROTKB|I3LRS3 [details] [associations]
symbol:I3LRS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 GO:GO:0030123
PANTHER:PTHR11134:SF1 Ensembl:ENSSSCT00000024280 OMA:ESADSXT
Uniprot:I3LRS3
Length = 995
Score = 258 (95.9 bits), Expect = 8.1e-38, Sum P(3) = 8.1e-38
Identities = 54/128 (42%), Positives = 85/128 (66%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 31 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 90
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 91 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 148
Query: 124 SLKDLISD 131
++ L++D
Sbjct: 149 VIEKLLAD 156
Score = 230 (86.0 bits), Expect = 8.1e-38, Sum P(3) = 8.1e-38
Identities = 46/139 (33%), Positives = 82/139 (58%)
Query: 279 IKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRC 338
+K F+ + DP +K+ KLE++ LA++ NI VL EF+ Y +D DFV ++AIGRC
Sbjct: 295 LKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRC 354
Query: 339 AIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLD 398
A + R + C++ L++L+ + VV E+++VIK + + P + II L + D +
Sbjct: 355 ATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQ 414
Query: 399 EPEAKASMIW-IIGEYAER 416
A+ +++W ++ Y+ R
Sbjct: 415 VMMAQRAVVWRLVPMYSCR 433
Score = 47 (21.6 bits), Expect = 8.1e-38, Sum P(3) = 8.1e-38
Identities = 26/108 (24%), Positives = 42/108 (38%)
Query: 472 ETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSS 531
E +P +R+ W S+ E K+ EKP SD + P+ E A+ S
Sbjct: 568 EAPDPSVRNVEVPEWTKCSSR-EKRKE---KEKPFYSDSEGESGPT---ES-ADSDPESE 619
Query: 532 VYHKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQ 579
+ + ++S +D+ED E+G S +EG Q
Sbjct: 620 SESDSKSSSESGSGGSSSESDNEDQDEDEEKGRSSESDQSEEEGKKRQ 667
>UNIPROTKB|B1ALD2 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0005802 PANTHER:PTHR11134 EMBL:AL137856
UniGene:Hs.515048 HGNC:HGNC:572 HOGENOM:HOG000294128
IPI:IPI00643929 SMR:B1ALD2 STRING:B1ALD2 Ensembl:ENST00000369571
HOVERGEN:HBG091836 Uniprot:B1ALD2
Length = 262
Score = 312 (114.9 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 70/223 (31%), Positives = 116/223 (52%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMIL 223
+L+ L RY+ E +I+ + L+ ++ VV+ A K+ L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFL 260
>CGD|CAL0003756 [details] [associations]
symbol:orf19.1323 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006896
"Golgi to vacuole transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 CGD:CAL0003756 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 eggNOG:COG5096
PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1
EMBL:AACQ01000139 EMBL:AACQ01000138 RefSeq:XP_709962.1
RefSeq:XP_712999.1 ProteinModelPortal:Q59TL3 STRING:Q59TL3
GeneID:3645373 GeneID:3645401 KEGG:cal:CaO19.1323
KEGG:cal:CaO19.8903 Uniprot:Q59TL3
Length = 771
Score = 314 (115.6 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 105/444 (23%), Positives = 200/444 (45%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
+T +D F DVV + + ++++LV +YL YA+ +PD A+L++N+ K D +P
Sbjct: 65 ITREEDALPYFADVVKNITNSDPKIRQLVIIYLTKYAEVEPDTALLSINSIQKSLNDKDP 124
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+ RA A+R++ IR+ I L ++R D P VR AI + K+Y I+ R
Sbjct: 125 INRANAIRSLAGIRIGSIIPILVLSMKRTSTDRSPLVRAATAISIGKIYQISGR--SKRQ 182
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSH-TLSKLLTALNECTEWGQV 179
+E L L++D + H + LN+ EW Q
Sbjct: 183 MIEYLSKLLTDSEVMVVGAAIKTYAKIRMELNEEKRWTPIHGNFRRFCKLLNQFDEWTQS 242
Query: 180 FILDALSRYKAA-------DA---REAENIVERVTPRLQHANCAVVLSAVKMILQQMELI 229
++++ L+ Y D + E + + P +Q + +V+LS K I
Sbjct: 243 YVVELLTEYSRKFLLRPINDEITDDDLELFLRSMKPLVQSISESVILSVAKSIYLLAPRQ 302
Query: 230 TSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDP 289
D +L + + T L+ + ++ AL ++ I + + K F+ +D
Sbjct: 303 LFCDFQLDL---VLTRIATSLN-QSDVSLFALEVVSFI-SKSDKLFESYYKSFYVTPSDS 357
Query: 290 IYVKMEKLEIMIKLASDRNIDQVLLEFKEYAT-EVDVDFVRKAVRAIGRCA-IKLERAAE 347
V + K+ I+ L++ N + E K YA + +++++A+G+C+ + LE + +
Sbjct: 358 NDVAICKINILSALSNQENFKYIFEELKYYAIYSTNKSISKESIKAMGKCSGLSLEWS-Q 416
Query: 348 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESI-----------IATLCESLDT 396
+ + L+ IK + E + V++ + ++ ++ +S+ +A + E
Sbjct: 417 KILKWCLKKIKTSRGETLNELLTVVRYLIQQKSDSNDSLNKAEVLKTTFNLAAILEDSSV 476
Query: 397 LDEPEAKASMIWIIGEYAERIDNA 420
E EA+AS+IWIIGEY +N+
Sbjct: 477 ELETEARASIIWIIGEYTALAENS 500
Score = 56 (24.8 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 30/126 (23%), Positives = 55/126 (43%)
Query: 460 QMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA--AKDVVLAEKPVI---SDDSNQL 514
+M Q L+ A ++ D RDRA ++ LLS+ A A + KPV SD ++ L
Sbjct: 562 KMFQHALHLAKYDSSY-DTRDRARMFSVLLSSVDRAQLASLFLQVPKPVPFVKSDTADYL 620
Query: 515 DPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRTDDEDYPNGS-EQGYSDAPTHVAD 573
+D+ + S PP++ T ++ + + + S + + +P+ V +
Sbjct: 621 RLRAIDDYF-EVCDWSDQDKLPPKSIRTEFTVQVNKLGNVSFTSSSTSREKTKSPSPVGE 679
Query: 574 EGASPQ 579
S Q
Sbjct: 680 HSFSSQ 685
>UNIPROTKB|Q59TL3 [details] [associations]
symbol:APL6 "Potential clathrin-associated protein AP-3
complex component" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 CGD:CAL0003756 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 eggNOG:COG5096
PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1
EMBL:AACQ01000139 EMBL:AACQ01000138 RefSeq:XP_709962.1
RefSeq:XP_712999.1 ProteinModelPortal:Q59TL3 STRING:Q59TL3
GeneID:3645373 GeneID:3645401 KEGG:cal:CaO19.1323
KEGG:cal:CaO19.8903 Uniprot:Q59TL3
Length = 771
Score = 314 (115.6 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 105/444 (23%), Positives = 200/444 (45%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
+T +D F DVV + + ++++LV +YL YA+ +PD A+L++N+ K D +P
Sbjct: 65 ITREEDALPYFADVVKNITNSDPKIRQLVIIYLTKYAEVEPDTALLSINSIQKSLNDKDP 124
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+ RA A+R++ IR+ I L ++R D P VR AI + K+Y I+ R
Sbjct: 125 INRANAIRSLAGIRIGSIIPILVLSMKRTSTDRSPLVRAATAISIGKIYQISGR--SKRQ 182
Query: 121 FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSH-TLSKLLTALNECTEWGQV 179
+E L L++D + H + LN+ EW Q
Sbjct: 183 MIEYLSKLLTDSEVMVVGAAIKTYAKIRMELNEEKRWTPIHGNFRRFCKLLNQFDEWTQS 242
Query: 180 FILDALSRYKAA-------DA---REAENIVERVTPRLQHANCAVVLSAVKMILQQMELI 229
++++ L+ Y D + E + + P +Q + +V+LS K I
Sbjct: 243 YVVELLTEYSRKFLLRPINDEITDDDLELFLRSMKPLVQSISESVILSVAKSIYLLAPRQ 302
Query: 230 TSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDP 289
D +L + + T L+ + ++ AL ++ I + + K F+ +D
Sbjct: 303 LFCDFQLDL---VLTRIATSLN-QSDVSLFALEVVSFI-SKSDKLFESYYKSFYVTPSDS 357
Query: 290 IYVKMEKLEIMIKLASDRNIDQVLLEFKEYAT-EVDVDFVRKAVRAIGRCA-IKLERAAE 347
V + K+ I+ L++ N + E K YA + +++++A+G+C+ + LE + +
Sbjct: 358 NDVAICKINILSALSNQENFKYIFEELKYYAIYSTNKSISKESIKAMGKCSGLSLEWS-Q 416
Query: 348 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESI-----------IATLCESLDT 396
+ + L+ IK + E + V++ + ++ ++ +S+ +A + E
Sbjct: 417 KILKWCLKKIKTSRGETLNELLTVVRYLIQQKSDSNDSLNKAEVLKTTFNLAAILEDSSV 476
Query: 397 LDEPEAKASMIWIIGEYAERIDNA 420
E EA+AS+IWIIGEY +N+
Sbjct: 477 ELETEARASIIWIIGEYTALAENS 500
Score = 56 (24.8 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 30/126 (23%), Positives = 55/126 (43%)
Query: 460 QMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA--AKDVVLAEKPVI---SDDSNQL 514
+M Q L+ A ++ D RDRA ++ LLS+ A A + KPV SD ++ L
Sbjct: 562 KMFQHALHLAKYDSSY-DTRDRARMFSVLLSSVDRAQLASLFLQVPKPVPFVKSDTADYL 620
Query: 515 DPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRTDDEDYPNGS-EQGYSDAPTHVAD 573
+D+ + S PP++ T ++ + + + S + + +P+ V +
Sbjct: 621 RLRAIDDYF-EVCDWSDQDKLPPKSIRTEFTVQVNKLGNVSFTSSSTSREKTKSPSPVGE 679
Query: 574 EGASPQ 579
S Q
Sbjct: 680 HSFSSQ 685
>UNIPROTKB|B1ALD1 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL137856 UniGene:Hs.515048 HGNC:HGNC:572 HOGENOM:HOG000294128
IPI:IPI00515080 SMR:B1ALD1 STRING:B1ALD1 Ensembl:ENST00000369564
HOVERGEN:HBG106066 Uniprot:B1ALD1
Length = 296
Score = 298 (110.0 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 81/283 (28%), Positives = 137/283 (48%)
Query: 59 NPLIRA--LAVRTM--GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAE 114
NP I+A L R + IR+ + EY+ P+ L+D YVR+ A + AK+++++ +
Sbjct: 19 NPHIQADRLRYRNVIQRVIRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGD 78
Query: 115 LVEDRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECT 174
D + L L+ D + I LL +++
Sbjct: 79 SEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLD 136
Query: 175 EWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQMELITST 232
+WGQ +L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL +M T
Sbjct: 137 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQT 196
Query: 233 DVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYV 292
DV L + P L S E+ +VAL ++ I+ P + K FFC Y++P Y+
Sbjct: 197 DV---LVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYI 253
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAI 335
K++K+E++ +L +D N+ QVL E + Y T+V DF + A+ AI
Sbjct: 254 KLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAI 296
>UNIPROTKB|F5GWU4 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1 HGNC:HGNC:567
EMBL:AC105339 EMBL:FJ695193 IPI:IPI01012451
ProteinModelPortal:F5GWU4 SMR:F5GWU4 Ensembl:ENST00000541693
ArrayExpress:F5GWU4 Bgee:F5GWU4 Uniprot:F5GWU4
Length = 193
Score = 265 (98.3 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 63/176 (35%), Positives = 97/176 (55%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 24 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 83
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ +D+ +E
Sbjct: 84 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQ-LIE 141
Query: 124 SLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQV 179
++ L++D R ++ KL L + EWGQV
Sbjct: 142 VIEKLLADKTTLVAGSVVMAFEEVC--PER--IDLIHKNYRKLCNLLIDVEEWGQV 193
>GENEDB_PFALCIPARUM|PFF0655c [details] [associations]
symbol:PFF0655c "adapter-related protein,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0030135 "coated vesicle" evidence=ISS]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL844505 GO:GO:0030135 GO:GO:0020011 RefSeq:XP_966122.1
ProteinModelPortal:C6KSX7 PRIDE:C6KSX7
EnsemblProtists:PFF0655c:mRNA GeneID:3885757 KEGG:pfa:PFF0655c
EuPathDB:PlasmoDB:PF3D7_0613500 HOGENOM:HOG000281500 Uniprot:C6KSX7
Length = 1363
Score = 211 (79.3 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 51/127 (40%), Positives = 74/127 (58%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
DVS+LF DV+ + NL LKKL+Y YLI YA+ +L IL +N+F D + N IRA
Sbjct: 73 DVSNLFFDVLKNISINNLTLKKLIYNYLILYAEGNEELTILTINSFKNDLNNNNYQIRAS 132
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLES- 124
A++ M I+ + L + L++ KD PYVRK+ A + +Y+I+ + FL
Sbjct: 133 ALKAMASIKSIDMINILMNSLKKLSKDKSPYVRKSCADVIPSIYNIDKDQFM---FLRKI 189
Query: 125 LKDLISD 131
L DLI+D
Sbjct: 190 LLDLIND 196
Score = 116 (45.9 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 40/228 (17%), Positives = 104/228 (45%)
Query: 195 EAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEP 254
+ E ++++ L +C+VVL + + + ++ ++ + T+ E
Sbjct: 553 DIEIFIDKLLLLLSSNSCSVVLMCISSLYHLTKFFYKEYIIDSIINTLFR--CTMEKNE- 609
Query: 255 EIQYVALRNI-NLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVL 313
++ + L+++ ++I+ + + + I F+ K D +K K++++ L +D N +L
Sbjct: 610 DMYEIFLKSVKHIIIYLKDDFVKY-ISFFYIKPQDTNIIKSIKIDLLYILKNDYNKIIIL 668
Query: 314 LEFKE--YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIV 371
EF Y D ++K I A+ + + ++ ++ + ++I+
Sbjct: 669 DEFLYILYIPGNTEDIIKKLFSYITSIALTNSLCLSKAMQHIIIMLNSNIKLYSYQSILS 728
Query: 372 IKDIFRR-YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
++ + ++ + N I+ LC+ L ++ E K S++W + +Y + ID
Sbjct: 729 LRKLLKQSHKNQIVKILFFLCKILLSIHLEEVKISILWTLTKYQKYID 776
>UNIPROTKB|C6KSX7 [details] [associations]
symbol:PFF0655c "Adapter-related protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0020011 "apicoplast"
evidence=IDA] [GO:0030135 "coated vesicle" evidence=ISS]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL844505 GO:GO:0030135 GO:GO:0020011 RefSeq:XP_966122.1
ProteinModelPortal:C6KSX7 PRIDE:C6KSX7
EnsemblProtists:PFF0655c:mRNA GeneID:3885757 KEGG:pfa:PFF0655c
EuPathDB:PlasmoDB:PF3D7_0613500 HOGENOM:HOG000281500 Uniprot:C6KSX7
Length = 1363
Score = 211 (79.3 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 51/127 (40%), Positives = 74/127 (58%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
DVS+LF DV+ + NL LKKL+Y YLI YA+ +L IL +N+F D + N IRA
Sbjct: 73 DVSNLFFDVLKNISINNLTLKKLIYNYLILYAEGNEELTILTINSFKNDLNNNNYQIRAS 132
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLES- 124
A++ M I+ + L + L++ KD PYVRK+ A + +Y+I+ + FL
Sbjct: 133 ALKAMASIKSIDMINILMNSLKKLSKDKSPYVRKSCADVIPSIYNIDKDQFM---FLRKI 189
Query: 125 LKDLISD 131
L DLI+D
Sbjct: 190 LLDLIND 196
Score = 116 (45.9 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 40/228 (17%), Positives = 104/228 (45%)
Query: 195 EAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEP 254
+ E ++++ L +C+VVL + + + ++ ++ + T+ E
Sbjct: 553 DIEIFIDKLLLLLSSNSCSVVLMCISSLYHLTKFFYKEYIIDSIINTLFR--CTMEKNE- 609
Query: 255 EIQYVALRNI-NLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVL 313
++ + L+++ ++I+ + + + I F+ K D +K K++++ L +D N +L
Sbjct: 610 DMYEIFLKSVKHIIIYLKDDFVKY-ISFFYIKPQDTNIIKSIKIDLLYILKNDYNKIIIL 668
Query: 314 LEFKE--YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIV 371
EF Y D ++K I A+ + + ++ ++ + ++I+
Sbjct: 669 DEFLYILYIPGNTEDIIKKLFSYITSIALTNSLCLSKAMQHIIIMLNSNIKLYSYQSILS 728
Query: 372 IKDIFRR-YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
++ + ++ + N I+ LC+ L ++ E K S++W + +Y + ID
Sbjct: 729 LRKLLKQSHKNQIVKILFFLCKILLSIHLEEVKISILWTLTKYQKYID 776
>SGD|S000003493 [details] [associations]
symbol:APL6 "Beta3-like subunit of the yeast AP-3 complex"
species:4932 "Saccharomyces cerevisiae" [GO:0006623 "protein
targeting to vacuole" evidence=IMP] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA;IMP] [GO:0006896 "Golgi to vacuole transport"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602 SGD:S000003493
GO:GO:0005794 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 EMBL:BK006941 eggNOG:COG5096 GO:GO:0030665
PANTHER:PTHR11134 GO:GO:0006896 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OrthoDB:EOG44F9J9 EMBL:U35411
EMBL:Y07777 EMBL:Z73046 PIR:S64594 RefSeq:NP_011777.3
RefSeq:NP_011784.3 ProteinModelPortal:P46682 SMR:P46682
DIP:DIP-2684N IntAct:P46682 MINT:MINT-530434 STRING:P46682
PaxDb:P46682 PeptideAtlas:P46682 EnsemblFungi:YGR261C GeneID:853177
GeneID:853185 KEGG:sce:YGR261C KEGG:sce:YGR268C CYGD:YGR261c
HOGENOM:HOG000248160 OMA:LLHGHFR NextBio:973308
Genevestigator:P46682 GermOnline:YGR261C GO:GO:0006623
Uniprot:P46682
Length = 809
Score = 170 (64.9 bits), Expect = 4.6e-17, Sum P(3) = 4.6e-17
Identities = 34/126 (26%), Positives = 69/126 (54%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
DV F DVV + T + ++K+L++LYL+ +A++ P+L +L++N+ K D N +R
Sbjct: 78 DVQLYFADVVKNITTNDTKVKRLIHLYLLRFAENDPNLTLLSINSLQKSLSDSNSELRCF 137
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+ + +++ + + +++ + D VR A+ + KLY + L+ L
Sbjct: 138 ALSALSDMKMSSLAPIILHTVKKLVTDPSAMVRGEVALAIIKLYRAGKNDYHEE-LLDIL 196
Query: 126 KDLISD 131
K+L++D
Sbjct: 197 KELMAD 202
Score = 117 (46.2 bits), Expect = 4.6e-17, Sum P(3) = 4.6e-17
Identities = 53/220 (24%), Positives = 102/220 (46%)
Query: 207 LQHANCAVVLSAVKMILQ---QMELITSTDVVRNLCKKMAPPLV-TLLSAEPE-IQYVAL 261
LQ NC + S +IL + + S ++N K LV T+ E + + + L
Sbjct: 303 LQSLNCLIYSSNPTVILSCCNALYQLASPLQMKNT--KFIEALVRTVTMTENQGNKEMLL 360
Query: 262 RNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYAT 321
+ I+ + T+ K F+ DPI + K++I+ L ++ N+ ++ E K Y
Sbjct: 361 QAIHFLSILDQTLFLPYTKKFYVFPKDPIVASIWKIQILSTLINESNVKEIFKELKYYVA 420
Query: 322 EVDV--DFVRKAVRAIGRCAIKLERAAE-RCISVLLELIKI-KVNYVVQEAII-VIKDIF 376
+ V AV+++ RC +L + E + L++ ++ ++ V +A + VI+ +
Sbjct: 421 SAHFPENVVIMAVKSLSRCG-QLSTSWESHVMKWLIDHMESHNLSASVLDAYVNVIRMLV 479
Query: 377 RRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYA 414
++ P + II L + L T A+A ++W+ GE A
Sbjct: 480 QKNPTKHLRIIFKLADLLTVQTSLADNARAGIVWLFGEIA 519
Score = 68 (29.0 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 31/118 (26%), Positives = 51/118 (43%)
Query: 18 MQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRA-LAVRTMGCIRVD 76
+ N EL+ L + S LA + ++T K DP+ ++R +A+ + R
Sbjct: 127 LSDSNSELRCFALSALSDMKMSS--LAPIILHTVKKLVTDPSAMVRGEVALAIIKLYRAG 184
Query: 77 K--ITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVED--RGFLESLKDLIS 130
K E L D L+ + D DP V A + + Y + EL+ R + +K L S
Sbjct: 185 KNDYHEELLDILKELMADTDPKVISCAVLAYKECYADHLELLHGHFRRYCRIIKQLDS 242
Score = 51 (23.0 bits), Expect = 4.6e-17, Sum P(3) = 4.6e-17
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 519 LDELLANIATLSSVYHKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGAS 577
LDE ++I S P + V+ ++ +DE + + YSD+ + G S
Sbjct: 749 LDEFFSDIPERKS----KPRKIIKVVEESSDEDEDESEESSDDDEYSDSSLGTSSSGTS 803
>POMBASE|SPBC146.14c [details] [associations]
symbol:sec26 "coatomer beta subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0030134 "ER to Golgi transport vesicle" evidence=IC]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
PomBase:SPBC146.14c GO:GO:0005829 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006888
eggNOG:COG5096 GO:GO:0030126 GO:GO:0030134 HOGENOM:HOG000207417
PANTHER:PTHR10635 OMA:DFEWENK PIR:T39428 RefSeq:NP_595403.1
ProteinModelPortal:Q9UUF7 STRING:Q9UUF7 EnsemblFungi:SPBC146.14c.1
GeneID:2539798 KEGG:spo:SPBC146.14c OrthoDB:EOG483HCN
NextBio:20800947 Uniprot:Q9UUF7
Length = 940
Score = 144 (55.7 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYL-----INYAKSQPDLAILAVNTFVKDSQD 57
G + S+ V+ M + N ELKKL+Y Y N + ILA N+F D Q
Sbjct: 46 GDSLPSILMHVIRFVMPSRNKELKKLLYYYWEVCPKYNNDGTMKQEMILACNSFRNDLQH 105
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ + L +++CL+ YVRK A + V +Y ++ L+
Sbjct: 106 PNEFIRGATLRFLCKLKEPELLDPLIPTVRQCLEHRHAYVRKNAILAVFSIYQVSNHLIP 165
Query: 118 DRGFL 122
D L
Sbjct: 166 DAASL 170
Score = 128 (50.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 54/185 (29%), Positives = 82/185 (44%)
Query: 240 KKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPTILAHEIK--VFFCKYNDPIYVKME 295
K A L+ L E + + + L I+ + R +IL I + F +D V +
Sbjct: 275 KLAASRLLALADREADNNAKLIMLDRISQLAARDKSILEDLITDVIPFLSSSD-FDVCEK 333
Query: 296 KLEIMIKLASDRNIDQVLLEF-KEYA-----TEVDVDFVRKAV-RAIGRCAIKLERAAER 348
+ I++ L S RN++ +L F KE TE D D R+A+ +AI CAI A
Sbjct: 334 AISIIMGLVSSRNVEDILNHFQKELTKSNGETEKD-DGRRRALTKAIHSCAINFPHTAAT 392
Query: 349 CISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIW 408
I LL I + + IK++ ++P+ S I L SL L + +IW
Sbjct: 393 AIQYLLSHISDFQSKSASSVLSFIKEVMEKFPDLRSSNITKLLLSLKELRAGKIFRGVIW 452
Query: 409 IIGEY 413
I GEY
Sbjct: 453 IAGEY 457
Score = 60 (26.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 164 SKLLT-ALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMI 222
S+LL A E ++ +LD +S+ A D E+++ V P L ++ V A+ +I
Sbjct: 279 SRLLALADREADNNAKLIMLDRISQLAARDKSILEDLITDVIPFLSSSDFDVCEKAISII 338
Query: 223 LQQMELITSTDVVRNLCKKM 242
+ + D++ + K++
Sbjct: 339 MGLVSSRNVEDILNHFQKEL 358
>UNIPROTKB|K7EJX1 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000590432 Uniprot:K7EJX1
Length = 80
Score = 189 (71.6 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 37/40 (92%), Positives = 39/40 (97%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQ 40
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQ
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQ 80
>SGD|S000002646 [details] [associations]
symbol:SEC26 "Essential beta-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA;IGI;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030135
"coated vesicle" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 SGD:S000002646
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 EMBL:BK006938 GO:GO:0006888
EMBL:Z49701 eggNOG:COG5096 GO:GO:0030126 HOGENOM:HOG000207417
PANTHER:PTHR10635 GeneTree:ENSGT00390000005270 OrthoDB:EOG483HCN
EMBL:U11236 PIR:S54534 RefSeq:NP_010524.3 RefSeq:NP_010529.3
ProteinModelPortal:P41810 DIP:DIP-6467N IntAct:P41810
MINT:MINT-429001 STRING:P41810 PaxDb:P41810 PeptideAtlas:P41810
EnsemblFungi:YDR238C GeneID:851824 GeneID:851830 KEGG:sce:YDR238C
KEGG:sce:YDR243C CYGD:YDR238c KO:K12858 OMA:TEFRSMW NextBio:969701
Genevestigator:P41810 GermOnline:YDR238C Uniprot:P41810
Length = 973
Score = 143 (55.4 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 61/246 (24%), Positives = 112/246 (45%)
Query: 180 FILDALSRYKAADAREAENIVERV-TPRLQHANCAVVLSAVKMILQQMELITSTDVVRNL 238
FI +R A A+ E ++E + T L+ + L+ + + + +L
Sbjct: 232 FIRQDANRTPALKAQYIELLMELLSTTTSDEVIFETALALTVLSANPNVLVPAVNKLIDL 291
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
K++ + L+ + IQ + N+ + + IL +V + D V+ + L+
Sbjct: 292 AVKVSDNNIKLIVLD-RIQDINANNVGALEELTLDIL----RVLNAEDLD---VRSKALD 343
Query: 299 IMIKLASDRNIDQVL-LEFKEYATEV---DVD----FVRKAVRAIGRCAIKLERAAERCI 350
I + LA+ RN + V+ L KE T V D D + + ++ I A+ A +
Sbjct: 344 ISMDLATSRNAEDVVQLLKKELQTTVNNPDQDKAMQYRQLLIKTIRTVAVNFVEMAASVV 403
Query: 351 SVLLELIKIKVNYVVQEAIIV-IKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWI 409
S+LL+ I +N V II IK++ +YP +I+ + ++LD + +A +WI
Sbjct: 404 SLLLDFIG-DLNSVAASGIIAFIKEVIEKYPQLRANILENMVQTLDKVRSAKAYRGALWI 462
Query: 410 IGEYAE 415
+GEYAE
Sbjct: 463 MGEYAE 468
Score = 123 (48.4 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 1 MTVGKDVSSLFTDVVN-CMQTENLELKKLVYLY------LINYAKSQPDLAILAVNTFVK 53
M G + L ++ M ++N ELKKL+Y Y L K + ++ IL N
Sbjct: 51 MLEGNPMPELLMHIIRFVMPSKNKELKKLLYFYWEIVPKLAEDGKLRHEM-ILVCNAIQH 109
Query: 54 DSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINA 113
D Q PN IR +R + +R ++ E + + CL+ YVRK A + V ++ ++
Sbjct: 110 DLQHPNEYIRGNTLRFLTKLREAELLEQMVPSVLACLEYRHAYVRKYAILAVFSIFKVSE 169
Query: 114 ELVED 118
L+ D
Sbjct: 170 HLLPD 174
>CGD|CAL0000129 [details] [associations]
symbol:SEC26 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
CGD:CAL0000129 GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198
eggNOG:COG5096 GO:GO:0030126 EMBL:AACQ01000055 EMBL:AACQ01000054
HOGENOM:HOG000207417 PANTHER:PTHR10635 RefSeq:XP_717391.1
RefSeq:XP_717483.1 ProteinModelPortal:Q5A6M6 STRING:Q5A6M6
GeneID:3640891 GeneID:3641005 KEGG:cal:CaO19.528
KEGG:cal:CaO19.8161 Uniprot:Q5A6M6
Length = 952
Score = 144 (55.7 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 40/171 (23%), Positives = 83/171 (48%)
Query: 252 AEPEIQYVALRNINLIVQRRPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNID 310
++ ++ + L IN + ++ P +L +++ + + VK + L++ ++ + RN++
Sbjct: 290 SDNNVKIITLERINQLHKQHPGVLQDLSLEILRVLSSQDLDVKKKALDVTLQFITTRNVE 349
Query: 311 QV--LL--EFKEYATEVD---VDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNY 363
V LL E + A D D+ + + AI + AIK A I +LL+ I
Sbjct: 350 DVVKLLKKELQSTALSNDDKNADYRQLLINAIHQLAIKFVEVAANVIDLLLDSIADLNTT 409
Query: 364 VVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYA 414
E I +K++ ++P+ ++I+ L +L + + +W+IGEYA
Sbjct: 410 AAYEVITFVKEVVEKFPDLRDAILRRLILALPHVKSGKVFRGALWVIGEYA 460
Score = 116 (45.9 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLY------LINYAKSQPDLAILAVNTFVKDSQ 56
G + L ++ M + N ELKKL+Y Y + K + ++ IL N +D Q
Sbjct: 49 GDPLPDLLMHIIRFVMPSRNKELKKLLYHYWEVCPKMDESGKMRHEM-ILVCNAIQRDLQ 107
Query: 57 DPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELV 116
PN IR +R + ++ ++ E L +++CL+ YVRK A + ++ ++ L
Sbjct: 108 HPNEYIRGNTLRYLTKLKEPELLETLVPNVRQCLEHRHAYVRKNAVFALWSIHKVSDHLA 167
Query: 117 ED 118
D
Sbjct: 168 PD 169
>UNIPROTKB|Q5A6M6 [details] [associations]
symbol:SEC26 "Coatomer subunit beta" species:237561
"Candida albicans SC5314" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 CGD:CAL0000129 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 eggNOG:COG5096 GO:GO:0030126 EMBL:AACQ01000055
EMBL:AACQ01000054 HOGENOM:HOG000207417 PANTHER:PTHR10635
RefSeq:XP_717391.1 RefSeq:XP_717483.1 ProteinModelPortal:Q5A6M6
STRING:Q5A6M6 GeneID:3640891 GeneID:3641005 KEGG:cal:CaO19.528
KEGG:cal:CaO19.8161 Uniprot:Q5A6M6
Length = 952
Score = 144 (55.7 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 40/171 (23%), Positives = 83/171 (48%)
Query: 252 AEPEIQYVALRNINLIVQRRPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNID 310
++ ++ + L IN + ++ P +L +++ + + VK + L++ ++ + RN++
Sbjct: 290 SDNNVKIITLERINQLHKQHPGVLQDLSLEILRVLSSQDLDVKKKALDVTLQFITTRNVE 349
Query: 311 QV--LL--EFKEYATEVD---VDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNY 363
V LL E + A D D+ + + AI + AIK A I +LL+ I
Sbjct: 350 DVVKLLKKELQSTALSNDDKNADYRQLLINAIHQLAIKFVEVAANVIDLLLDSIADLNTT 409
Query: 364 VVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYA 414
E I +K++ ++P+ ++I+ L +L + + +W+IGEYA
Sbjct: 410 AAYEVITFVKEVVEKFPDLRDAILRRLILALPHVKSGKVFRGALWVIGEYA 460
Score = 116 (45.9 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLY------LINYAKSQPDLAILAVNTFVKDSQ 56
G + L ++ M + N ELKKL+Y Y + K + ++ IL N +D Q
Sbjct: 49 GDPLPDLLMHIIRFVMPSRNKELKKLLYHYWEVCPKMDESGKMRHEM-ILVCNAIQRDLQ 107
Query: 57 DPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELV 116
PN IR +R + ++ ++ E L +++CL+ YVRK A + ++ ++ L
Sbjct: 108 HPNEYIRGNTLRYLTKLKEPELLETLVPNVRQCLEHRHAYVRKNAVFALWSIHKVSDHLA 167
Query: 117 ED 118
D
Sbjct: 168 PD 169
>ASPGD|ASPL0000052724 [details] [associations]
symbol:AN1177 species:162425 "Emericella nidulans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 EMBL:AACD01000016 EMBL:BN001308
GO:GO:0005198 eggNOG:COG5096 GO:GO:0030126 HOGENOM:HOG000207417
PANTHER:PTHR10635 OMA:DFEWENK OrthoDB:EOG483HCN RefSeq:XP_658781.1
ProteinModelPortal:Q5BE53 STRING:Q5BE53
EnsemblFungi:CADANIAT00001449 GeneID:2876954 KEGG:ani:AN1177.2
Uniprot:Q5BE53
Length = 950
Score = 207 (77.9 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 88/430 (20%), Positives = 179/430 (41%)
Query: 1 MTVGKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAK--SQPDLA---ILAVNTFVKD 54
M G + L ++ M +++ LKKL+Y Y K S L IL N D
Sbjct: 49 MLNGDPMPQLLMHIIRFVMPSKSKPLKKLLYFYYEICPKHDSNGKLKQEMILVCNGIRND 108
Query: 55 SQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAE 114
Q PN +R +R + +R ++ E L + CL YVRK+A ++ ++ +
Sbjct: 109 LQHPNEYVRGNTLRFLCKLREPELIEPLLSSARSCLDHRHAYVRKSAVWAISSIFQHSES 168
Query: 115 LVEDRG-FLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNEC 173
L+ D +++ + SD S + E + T ++
Sbjct: 169 LIPDAPELIQTFLETESDGTCKRNAFAALMSI-----SHQKALEYLASTFD----SIPNT 219
Query: 174 TEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTD 233
E Q+ L+ + + +++ + + L + VV A + +TS
Sbjct: 220 DELLQLAELEFIRKDAVQNSQNKARYLRLIFDLLDASTSTVVYEAAT----SLTALTSNP 275
Query: 234 V-VRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDP-IY 291
V V+ K+ +++ A+ ++ + L ++ + R +L + P I
Sbjct: 276 VAVKAAAGKLIE--LSIKEADNNVKLIVLDRVDQLRIRNEGVLDDLTMEILRVLSSPDID 333
Query: 292 VKMEKLEIMIKLASDRNIDQ-VLLEFKEYATEVDVDFVRKA------VRAIGRCAIKLER 344
V+ + L I +++ S +N+++ V+L KE + VD + + + +++I CAIK
Sbjct: 334 VRRKALGIALEMVSSKNVEEIVMLLKKELSKTVDEQYEKNSEYRQLLIQSIHNCAIKFSE 393
Query: 345 AAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
A + +L++ I N + I +K++ ++P SI+ L +L + +
Sbjct: 394 IAASVVDLLMDFIADFNNNSAVDVISFVKEVVEKFPKLRPSIVNRLVSTLSEVRAGKVYR 453
Query: 405 SMIWIIGEYA 414
++W++GEY+
Sbjct: 454 GVLWVVGEYS 463
>UNIPROTKB|B1ALD3 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL137856 UniGene:Hs.515048 HGNC:HGNC:572 HOVERGEN:HBG106066
IPI:IPI00640132 SMR:B1ALD3 STRING:B1ALD3 Ensembl:ENST00000432415
HOGENOM:HOG000200012 Uniprot:B1ALD3
Length = 175
Score = 174 (66.3 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 42/139 (30%), Positives = 75/139 (53%)
Query: 170 LNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKM--ILQQME 227
+++ +WGQ +L+ L RY+ E +I+ + L+ ++ VV+ A K+ IL +M
Sbjct: 39 MSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMF 98
Query: 228 LITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYN 287
TDV L + P L S E+ +VAL ++ I+ P + K FFC Y+
Sbjct: 99 PHVQTDV---LVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYS 155
Query: 288 DPIYVKMEKLEIMIKLASD 306
+P Y+K++K+E++ +L +D
Sbjct: 156 EPHYIKLQKVEVLCELVND 174
>WB|WBGene00011775 [details] [associations]
symbol:T14G10.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005798 "Golgi-associated vesicle"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006898
GO:GO:0040010 GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0032940
GO:GO:0005198 GO:GO:0040011 GO:GO:0000003 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:Z68880
GeneID:177891 KEGG:cel:CELE_T14G10.5 CTD:177891
RefSeq:NP_001255464.1 ProteinModelPortal:F5GUA3 SMR:F5GUA3
EnsemblMetazoa:T14G10.5c WormBase:T14G10.5c Uniprot:F5GUA3
Length = 885
Score = 195 (73.7 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 113/593 (19%), Positives = 246/593 (41%)
Query: 2 TVGK-DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++G+ + + F V Q++++ L+++VYL + A+ D+ I+ ++ KD
Sbjct: 69 SIGRTEATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDV-IIVTSSLTKDMTGRED 127
Query: 61 LIRALAVRTMGCIRVDKITEY-LCDPLQRCLK----DDDPYVRKTAAICVAKLYDINAEL 115
L RA A+R + C KIT+ + ++R +K D + + +A + L ++E+
Sbjct: 128 LYRAAAIRAL-C----KITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEV 182
Query: 116 VEDRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTE 175
V R + +++ +S + ++ SK AL +
Sbjct: 183 V--RRWANEVQEAVSSDNHMVQYHALALLYQIRANDRLAVNKLVQK-FSK--NALR--SP 235
Query: 176 WGQVFILDALSRYKAAD--AREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTD 233
+ +++ +R D R ++ + L+H + VV A + I+ + T+
Sbjct: 236 YAVCYLIRIATRCLVDDDHCRPDSSVFTFIESCLRHKSEMVVYEAARAIVSLPQ--TTPS 293
Query: 234 VVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKY-NDPIY- 291
++ + + S + +++ A+R +N + P + V K+ DP
Sbjct: 294 EIQPAITALQ---MCCTSPKAAVRFAAVRTLNKVAMAHPNAVM-SCNVDLEKFITDPNRS 349
Query: 292 VKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCIS 351
+ + ++K ++ ++++++ + + E+ +F V AI + R +
Sbjct: 350 IATLAITTLLKTGAESSVERLMQQIAGFVNEISDEFKIVVVDAIRSLCSRYPRKHTVMMP 409
Query: 352 VLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWII 410
L ++++ +Y ++AI+ I I P+ + +A LCE ++ + ++ ++
Sbjct: 410 FLAKMLRSDGSYDYKKAIVETIIAIIEENPDAKVAGLAHLCEFIEDCEHDNLSTRVLHLL 469
Query: 411 GEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNAT 470
G A + N +V+ +TA K + P IQV+L
Sbjct: 470 GREAPKTPNPSSYIRFIYNRVILESTKVRAAAVTALAKFGAQCVDLRPS--IQVLLKRCL 527
Query: 471 VETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLS 530
+++D+ ++RDRA Y ++L+ EAA+ ++ ++ D Q+ PS L+ + +
Sbjct: 528 LDSDD-EVRDRATFYLKMLT---EAAEGLI--HNFIL--DGLQVSPSGLERSILDYLRSG 579
Query: 531 SVYHKPPEAFVTRVKTTASRTDDEDYPN-GSEQGYSDAPT---HVADEGASPQ 579
S Y P + V V A ++ P E+ AP + A A PQ
Sbjct: 580 S-YSSPFDLRVVPVTQQALSQPEKRVPQLVEEEEKPKAPKVEPYAAQLAAIPQ 631
>DICTYBASE|DDB_G0289371 [details] [associations]
symbol:copG "adaptin N-terminal domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI
vesicle coat" evidence=IEA;ISS] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005798 "Golgi-associated vesicle" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030663
"COPI-coated vesicle membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
dictyBase:DDB_G0289371 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
GenomeReviews:CM000154_GR EMBL:AAFI02000139 GO:GO:0006891
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
eggNOG:COG5240 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 HSSP:P53620 RefSeq:XP_636291.1
ProteinModelPortal:Q54HL0 IntAct:Q54HL0 STRING:Q54HL0 PRIDE:Q54HL0
EnsemblProtists:DDB0233801 GeneID:8627109 KEGG:ddi:DDB_G0289371
OMA:EMSSISE ProtClustDB:CLSZ2429791 Uniprot:Q54HL0
Length = 898
Score = 193 (73.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 91/523 (17%), Positives = 213/523 (40%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F Q++++ L++L+YL L + D AI+ +++ KD L RA
Sbjct: 63 EATDIFFAATKLFQSKDIPLRRLMYLLLKELSTISQD-AIIVISSLTKDMSHKIELYRAN 121
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I I + ++ + + DP+V A + L + E+V + + +
Sbjct: 122 AIRILCKITDSSILPQIERYFKQSIVEKDPHVSSAALVSSIHLLKVCPEIV--KRWANEV 179
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
++ IS+ + ++ S+ + L + + Q +++
Sbjct: 180 QEAISNKSNMVQYHALALLHRIKQHDRLAVSKLVSNLIKNSLRS-----PYAQSYLIRCC 234
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMI-----LQQMELITSTDVVRNLCK 240
E E + L+ N V A + I + E+ ++ V++N
Sbjct: 235 VEVIEETNTEDRIFREYIESCLRSKNEMVAYEAARSICTFKNVSNKEINSAVGVLQNF-- 292
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAH---EIKVFFCKYNDPIYVKMEKL 297
L S +P +++ A+R +N + Q PT + +++ N I +
Sbjct: 293 --------LNSTKPTLRFAAVRTLNKLAQTNPTAVIPCNLDMENLITDTNRSIATLA--I 342
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELI 357
++K+ ++ N+++++ + + +++ +F V AI + K + + I L +++
Sbjct: 343 TTLLKVGNESNVERLIKQIANFLGDINDEFKIVVVDAITSLSQKFPKKYKHLIIFLNKIL 402
Query: 358 KIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAER 416
+ + +++A + I + P + E + LC+ ++ D P+ ++ +IG+
Sbjct: 403 RDEGTLQLKQATLDAILTVVNNIPESKEIALTELCDYIEDCDFPDLSVQILHLIGQEGPL 462
Query: 417 IDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNP 476
+ ++ +T+ K L E ++ + ++L ++ D+
Sbjct: 463 TSSPAQYMRYIYNRVLLDGGIIRAAAVTSIAKFGLLY--EPMKEKVVILLQRCLLDEDD- 519
Query: 477 DLRDRAYIYWRLLS-TDPEAAKDVVLAEKPVISDDSNQLDPSL 518
++RDRA +Y +L D V++ + PV N L SL
Sbjct: 520 EVRDRATLYLKLFKENDVRYLNKVLMDDVPV---PLNNLQKSL 559
>TAIR|locus:2139479 [details] [associations]
symbol:AT4G34450 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005798 "Golgi-associated
vesicle" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0009507
GO:GO:0006886 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 EMBL:AL161585
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
EMBL:AL023094 eggNOG:COG5240 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AK221839 EMBL:AK226533 IPI:IPI00537691
PIR:T05265 RefSeq:NP_195171.2 UniGene:At.25572
ProteinModelPortal:Q0WW26 SMR:Q0WW26 IntAct:Q0WW26 STRING:Q0WW26
PaxDb:Q0WW26 PRIDE:Q0WW26 ProMEX:Q0WW26 EnsemblPlants:AT4G34450.1
GeneID:829596 KEGG:ath:AT4G34450 TAIR:At4g34450 InParanoid:Q0WW26
OMA:DESIFAN PhylomeDB:Q0WW26 ProtClustDB:CLSN2681006
Genevestigator:Q0WW26 Uniprot:Q0WW26
Length = 886
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 98/530 (18%), Positives = 218/530 (41%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F V Q+++ L+++VYL + + S D I+ ++ +KD + RA
Sbjct: 67 EATEVFFSVTKLFQSKDTGLRRMVYLIIKELSPSS-DEVIIVTSSLMKDMNSKIDMYRAN 125
Query: 66 AVRTMGCIRVD-KITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLES 124
A+R + C +D + + L++ + D +P V A + L N E+V + +
Sbjct: 126 AIRVL-CRIIDGTLLTQIERYLKQAIVDKNPVVSSAALVSGLHLLKTNPEIV--KRWSNE 182
Query: 125 LKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEIT-SHTLSKLLTALNECTEWGQVFILD 183
+++ I + ++ S T + + L +C +
Sbjct: 183 VQEGIQSRSALVQFHALALLHQIRQNDRLAVSKLVGSLTRGSVRSPLAQCL---LIRYTS 239
Query: 184 ALSRYKAADAREAEN-IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKM 242
+ R A + E E + L+H V+L A + I + ++ +TS R L +
Sbjct: 240 QVIRDMANHGQSGERPFYEFLESCLRHKAEMVILEAARAITE-LDGVTS----RELTPAI 294
Query: 243 APPLVTLLSAEPEIQYVALRNINLIVQRRPTILAH---EIKVFFCKYNDPIYVKMEKLEI 299
+ L S P +++ A+R +N + P + + +++ N I +
Sbjct: 295 TVLQLFLSSPRPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLA--ITT 352
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
++K ++ ++++++ + + +++ +F V AI +K ++ L +++
Sbjct: 353 LLKTGNESSVERLMKQITNFMSDIADEFKIVVVDAIRSLCVKFPLKYRSLMTFLSNILRE 412
Query: 360 KVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
+ + + AI+ I I R P+ ES + LCE ++ + ++ +G
Sbjct: 413 EGGFEYKRAIVDSIVTIIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGIEGPNTS 472
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKL-FLKKPTEGPQQMIQVVLNNATVETDNPD 477
+ A V+ ++ K F+ E + I V+L ++D+ +
Sbjct: 473 DPSKYIRYIYNRVHLENATVRAAAVSTLAKFGFM---VESLKPRITVLLKRCIYDSDD-E 528
Query: 478 LRDRAYIYWRLLS------TDPEAAKDVVLA--EKPVISDDSN--QLDPS 517
+RDRA +Y +L TD E+ KD + E P+++ +++ +PS
Sbjct: 529 VRDRATLYLSVLGGDGTVDTDKES-KDFLFGSLEVPLVNMETSLKNYEPS 577
>ZFIN|ZDB-GENE-030219-38 [details] [associations]
symbol:copb1 "coatomer protein complex, subunit beta
1" species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 ZFIN:ZDB-GENE-030219-38
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 eggNOG:COG5096
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000207417 PANTHER:PTHR10635
CTD:1315 GeneTree:ENSGT00390000005270 HOVERGEN:HBG005380
OMA:DFEWENK OrthoDB:EOG4KPT94 EMBL:AY294010 EMBL:BC081657
IPI:IPI00639577 RefSeq:NP_001002013.1 UniGene:Dr.77150
ProteinModelPortal:Q66HV4 STRING:Q66HV4 PRIDE:Q66HV4
Ensembl:ENSDART00000079042 GeneID:338138 KEGG:dre:338138
InParanoid:Q6JWU8 NextBio:20812553 Bgee:Q66HV4 Uniprot:Q66HV4
Length = 953
Score = 179 (68.1 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 88/433 (20%), Positives = 178/433 (41%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVHTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ PT +L + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-IELKEHPTHERVLQDLVMDILRVLTTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYA------TE-VDVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ TE D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N II + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDTNEAAAADVLEFVREAIQRFDNLRPLIIEKMLEVFHAIKTV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>UNIPROTKB|E9PP73 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR10635
HGNC:HGNC:2231 ChiTaRS:COPB1 EMBL:AC018523 IPI:IPI00982417
ProteinModelPortal:E9PP73 SMR:E9PP73 PRIDE:E9PP73
Ensembl:ENST00000534234 ArrayExpress:E9PP73 Bgee:E9PP73
Uniprot:E9PP73
Length = 486
Score = 173 (66.0 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 84/433 (19%), Positives = 177/433 (40%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVQTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-IELKEHPAHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ + D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>UNIPROTKB|A0JN39 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198
GO:GO:0005793 eggNOG:COG5096 GO:GO:0030126 HOGENOM:HOG000207417
PANTHER:PTHR10635 EMBL:BC126502 IPI:IPI00712785
RefSeq:NP_001071475.1 UniGene:Bt.22486 STRING:A0JN39 PRIDE:A0JN39
Ensembl:ENSBTAT00000008616 GeneID:535533 KEGG:bta:535533 CTD:1315
GeneTree:ENSGT00390000005270 HOVERGEN:HBG005380 InParanoid:A0JN39
OMA:DFEWENK OrthoDB:EOG4KPT94 NextBio:20876774 Uniprot:A0JN39
Length = 953
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 85/439 (19%), Positives = 179/439 (40%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVQTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-IELKEHPAHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ + D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEYAERIDN 419
+ +WI+GEY D+
Sbjct: 453 KIYRGALWILGEYCSTKDD 471
>UNIPROTKB|F1S982 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9823 "Sus
scrofa" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 PANTHER:PTHR10635 GeneTree:ENSGT00390000005270
EMBL:CU487223 Ensembl:ENSSSCT00000014629 OMA:LELATLX Uniprot:F1S982
Length = 590
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 84/433 (19%), Positives = 177/433 (40%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVQTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-IELKEHPAHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ + D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>ASPGD|ASPL0000012367 [details] [associations]
symbol:AN4207 species:162425 "Emericella nidulans"
[GO:0016197 "endosomal transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0030121 "AP-1 adaptor complex" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 EMBL:BN001302 GO:GO:0030131 SUPFAM:SSF49348
eggNOG:NOG303101 HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GO:GO:0044431
OrthoDB:EOG4X9BRC EMBL:AACD01000068 RefSeq:XP_661811.1
ProteinModelPortal:Q5B5H3 SMR:Q5B5H3 STRING:Q5B5H3
EnsemblFungi:CADANIAT00004455 GeneID:2873629 KEGG:ani:AN4207.2
OMA:DCASGVF Uniprot:Q5B5H3
Length = 839
Score = 118 (46.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 50/242 (20%), Positives = 99/242 (40%)
Query: 181 ILDALSRYKAADAREAENIVERV---TPRLQHANCAVVLSAVKMILQQMELITSTDVVRN 237
+L L+R A + +I+ +V T ++ A++ AV IL I + +R
Sbjct: 257 LLRVLARGDTATSELINDILAQVATNTDSSKNVGNAILYEAVLTILD----IEADSGLRV 312
Query: 238 LCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEK 296
L + +T + + I+YVAL +N +V P + H V C + I ++
Sbjct: 313 LGVNILGKFLT--NKDNNIRYVALNTLNKVVAIEPNAVQRHRNTVLECLRDPDISIRRRA 370
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLEL 356
L++ L ++ N+ ++ E + D +F IG A + +L +
Sbjct: 371 LDLSFMLINESNVRVLVRELLAFLEVADNEFKPTMTTQIGIAADRYAPNKRWHADTILRV 430
Query: 357 IKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESL-DTLDEPEAKASMIWIIGEYAE 415
+K+ YV ++ + + P + L SL + + + + W+IGEY +
Sbjct: 431 LKLAGAYVKEQILSSFVRLIATTPELQTYSVQKLYVSLKEDISQEGLTLAATWLIGEYGD 490
Query: 416 RI 417
+
Sbjct: 491 NL 492
Score = 107 (42.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K+L YL + ++ L N+ D N I L++ T+G I +++ L
Sbjct: 81 KRLGYLGTMLLLDENQEVLTLVTNSLKNDLNHSNQYIVGLSLCTLGNIASVEMSRDLFTE 140
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
++ L +PY+R+ AA+C ++ +L E FLE K+L+SD
Sbjct: 141 VESLLSTANPYIRRKAALCAMRICRKVPDLQEH--FLEKAKNLLSD 184
>UNIPROTKB|Q5ZIA5 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 eggNOG:COG5096
GO:GO:0030126 HOGENOM:HOG000207417 PANTHER:PTHR10635 CTD:1315
GeneTree:ENSGT00390000005270 HOVERGEN:HBG005380 OMA:DFEWENK
OrthoDB:EOG4KPT94 EMBL:AJ720879 IPI:IPI00599398
RefSeq:NP_001006467.1 UniGene:Gga.3647 ProteinModelPortal:Q5ZIA5
STRING:Q5ZIA5 PRIDE:Q5ZIA5 Ensembl:ENSGALT00000009679 GeneID:423063
KEGG:gga:423063 InParanoid:Q5ZIA5 NextBio:20825590 Uniprot:Q5ZIA5
Length = 953
Score = 175 (66.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 86/433 (19%), Positives = 179/433 (41%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVQTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P+ +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-VELKEHPSHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYA------TE-VDVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ TE D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRPLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>UNIPROTKB|P53618 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030126 "COPI
vesicle coat" evidence=ISS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=TAS] [GO:0005798 "Golgi-associated vesicle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
[GO:0048205 "COPI coating of Golgi vesicle" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 GO:GO:0005829 GO:GO:0005886 GO:GO:0019048
GO:GO:0006886 EMBL:CH471064 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198 GO:GO:0006891
GO:GO:0005793 eggNOG:COG5096 GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000207417 PANTHER:PTHR10635 CTD:1315
HOVERGEN:HBG005380 OMA:DFEWENK OrthoDB:EOG4KPT94 EMBL:AF084457
EMBL:AF111807 EMBL:AL136593 EMBL:BC037280 EMBL:X82103
IPI:IPI00295851 PIR:A55136 PIR:T46913 RefSeq:NP_001137533.1
RefSeq:NP_001137534.1 RefSeq:NP_057535.1 UniGene:Hs.339278
ProteinModelPortal:P53618 SMR:P53618 DIP:DIP-265N IntAct:P53618
MINT:MINT-1151935 STRING:P53618 PhosphoSite:P53618 DMDM:116241311
PaxDb:P53618 PeptideAtlas:P53618 PRIDE:P53618 DNASU:1315
Ensembl:ENST00000249923 Ensembl:ENST00000439561 GeneID:1315
KEGG:hsa:1315 UCSC:uc001mlg.2 GeneCards:GC11M014436
H-InvDB:HIX0009466 HGNC:HGNC:2231 HPA:CAB012338 MIM:600959
neXtProt:NX_P53618 PharmGKB:PA26747 InParanoid:P53618 ChiTaRS:COPB1
GenomeRNAi:1315 NextBio:5379 ArrayExpress:P53618 Bgee:P53618
CleanEx:HS_COPB1 Genevestigator:P53618 GermOnline:ENSG00000129083
Uniprot:P53618
Length = 953
Score = 173 (66.0 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 84/433 (19%), Positives = 177/433 (40%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVQTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-IELKEHPAHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ + D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>UNIPROTKB|D2SW95 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198
GO:GO:0005793 GO:GO:0030126 PANTHER:PTHR10635 CTD:1315
EMBL:FJ865397 RefSeq:NP_001165837.1 UniGene:Ssc.2442
GeneID:100337660 KEGG:ssc:100337660 Uniprot:D2SW95
Length = 953
Score = 173 (66.0 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 84/433 (19%), Positives = 177/433 (40%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVQTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-IELKEHPAHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ + D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>FB|FBgn0008635 [details] [associations]
symbol:betaCop "beta-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 GO:GO:0005794
GO:GO:0006886 GO:GO:0006911 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198 EMBL:AE014298
GO:GO:0000902 eggNOG:COG5096 GO:GO:0030126 GO:GO:0010883
PANTHER:PTHR10635 GeneTree:ENSGT00390000005270 OMA:DFEWENK
EMBL:L31852 EMBL:AF145656 RefSeq:NP_523400.1 UniGene:Dm.2883
ProteinModelPortal:P45437 SMR:P45437 DIP:DIP-23112N IntAct:P45437
MINT:MINT-846029 STRING:P45437 PaxDb:P45437
EnsemblMetazoa:FBtr0074576 GeneID:32820 KEGG:dme:Dmel_CG6223
CTD:32820 FlyBase:FBgn0008635 InParanoid:P45437 OrthoDB:EOG4MGQP7
PhylomeDB:P45437 GenomeRNAi:32820 NextBio:780558 Bgee:P45437
GermOnline:CG6223 Uniprot:P45437
Length = 964
Score = 127 (49.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 290 IYVKMEKLEIMIKLASDRNIDQVLLEFK-EYATEVDVD------FVRKAVRAIGRCAIKL 342
I V+ + L + + L RNI +++L K E A +V+ + + VR + C+IK
Sbjct: 332 IEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGKYRQLLVRTLHTCSIKF 391
Query: 343 ERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEA 402
A I VL+E + + +I I++ +++P II L E+ + +
Sbjct: 392 PDVAANVIPVLVEFLSDTNELAAADVLIFIREAIQKFPALRALIIEHLIEAFPQIKSSKI 451
Query: 403 KASMIWIIGEYAE 415
+ +WI+GEY E
Sbjct: 452 HRAAVWILGEYVE 464
Score = 96 (38.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD---LA--ILAVNTFVKDSQD 57
G+ L ++ + +N +KKL+ ++ K+ D L IL + + KD Q
Sbjct: 50 GERYPGLIMTIIRFVLPVQNHTIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQH 109
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN +R +R + ++ ++ E L ++ CL YVR+ A + + +Y LV
Sbjct: 110 PNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDHRHSYVRRNAVLAIFTIYKNFDWLVP 169
Query: 118 D-----RGFLESLKDL 128
D FL++ +D+
Sbjct: 170 DGPELIASFLDTQQDM 185
>UNIPROTKB|E2R9A2 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GO:GO:0030126 PANTHER:PTHR10635
CTD:1315 GeneTree:ENSGT00390000005270 OMA:DFEWENK EMBL:AAEX03012936
RefSeq:XP_534069.3 Ensembl:ENSCAFT00000013410 GeneID:476866
KEGG:cfa:476866 Uniprot:E2R9A2
Length = 953
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 84/433 (19%), Positives = 177/433 (40%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVHTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-IELKEHPAHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ + D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>MGI|MGI:1917599 [details] [associations]
symbol:Copb1 "coatomer protein complex, subunit beta 1"
species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISO;IDA] [GO:0005798
"Golgi-associated vesicle" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030137 "COPI-coated vesicle"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
MGI:MGI:1917599 GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
EMBL:CH466531 GO:GO:0006891 GO:GO:0005793 eggNOG:COG5096
GO:GO:0030137 GO:GO:0030126 HOGENOM:HOG000207417 PANTHER:PTHR10635
CTD:1315 GeneTree:ENSGT00390000005270 HOVERGEN:HBG005380
OMA:DFEWENK OrthoDB:EOG4KPT94 EMBL:AF231925 EMBL:AK149828
EMBL:AK152222 EMBL:AK161544 EMBL:AK172214 EMBL:BC030837
IPI:IPI00120503 RefSeq:NP_203534.1 UniGene:Mm.277024
ProteinModelPortal:Q9JIF7 SMR:Q9JIF7 DIP:DIP-42642N IntAct:Q9JIF7
MINT:MINT-1489518 STRING:Q9JIF7 PhosphoSite:Q9JIF7 PaxDb:Q9JIF7
PRIDE:Q9JIF7 Ensembl:ENSMUST00000033012 GeneID:70349 KEGG:mmu:70349
InParanoid:Q3T9Y4 NextBio:331414 Bgee:Q9JIF7 CleanEx:MM_COPB1
Genevestigator:Q9JIF7 GermOnline:ENSMUSG00000030754 Uniprot:Q9JIF7
Length = 953
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 84/433 (19%), Positives = 177/433 (40%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVQTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-VELKEHPAHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ + D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>RGD|620861 [details] [associations]
symbol:Copb1 "coatomer protein complex, subunit beta 1"
species:10116 "Rattus norvegicus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISO;IDA]
[GO:0005798 "Golgi-associated vesicle" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=TAS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IDA] [GO:0030126 "COPI vesicle
coat" evidence=IDA] [GO:0030137 "COPI-coated vesicle" evidence=ISO]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
RGD:620861 GO:GO:0005783 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0006891 GO:GO:0005793
eggNOG:COG5096 GO:GO:0030126 GO:GO:0006890 HOGENOM:HOG000207417
PANTHER:PTHR10635 CTD:1315 GeneTree:ENSGT00390000005270
HOVERGEN:HBG005380 OMA:DFEWENK OrthoDB:EOG4KPT94 EMBL:X57228
EMBL:BC061882 IPI:IPI00211812 PIR:S13520 RefSeq:NP_542959.1
UniGene:Rn.4327 ProteinModelPortal:P23514 IntAct:P23514
STRING:P23514 PRIDE:P23514 Ensembl:ENSRNOT00000016292 GeneID:114023
KEGG:rno:114023 UCSC:RGD:620861 InParanoid:P23514 NextBio:618175
Genevestigator:P23514 GermOnline:ENSRNOG00000012000 Uniprot:P23514
Length = 953
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 84/433 (19%), Positives = 177/433 (40%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYLINYAKSQPD--LA---ILAVNTFVKDSQD 57
G+ + L ++ + ++ +KKL+ ++ K+ PD L IL + + KD Q
Sbjct: 52 GEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQH 111
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ E L ++ CL+ YVR+ A + + +Y L+
Sbjct: 112 PNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIP 171
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI D I L L T +++ +G
Sbjct: 172 DA------PELIHDFLVNEKDASCKRNAFMML-----IHADQDRALDYLSTCIDQVQTFG 220
Query: 178 ---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
Q+ I++ + + A+ E + + LQ ++ AV A L+T +
Sbjct: 221 DILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGT------LVTLSSA 274
Query: 235 VRNLCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPT---ILAHEIKVFFCKYNDP 289
+ K A + L+ E + ++ + L + + ++ P +L + + P
Sbjct: 275 PTAI-KAAAQCYIDLIIKESDNNVKLIVLDRL-VELKEHPAHERVLQDLVMDILRVLSTP 332
Query: 290 -IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAI 340
+ V+ + L++ + L S RN++++++ K+ + D D R+ VR + C++
Sbjct: 333 DLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV 392
Query: 341 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 400
+ A I VL+E + + + +++ +R+ N I+ + E +
Sbjct: 393 RFPDMAANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSV 452
Query: 401 EAKASMIWIIGEY 413
+ +WI+GEY
Sbjct: 453 KIYRGALWILGEY 465
>POMBASE|SPAC57A7.10c [details] [associations]
symbol:sec21 "coatomer gamma subunit Sec21 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISO] [GO:0030126 "COPI vesicle coat"
evidence=ISO] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
PomBase:SPAC57A7.10c GO:GO:0005829 GO:GO:0006886 EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CU329670_GR GO:GO:0005198
GO:GO:0006888 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 eggNOG:COG5240 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:DESIFAN PIR:T38944 RefSeq:NP_593371.1
ProteinModelPortal:P87140 STRING:P87140 EnsemblFungi:SPAC57A7.10c.1
GeneID:2542247 KEGG:spo:SPAC57A7.10c OrthoDB:EOG4FFH8X
NextBio:20803312 Uniprot:P87140
Length = 905
Score = 158 (60.7 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 58/280 (20%), Positives = 122/280 (43%)
Query: 235 VRNLCKKMAPPLVTLL-----SAEPEIQYVALRNINLIVQRRPTILAHE----IKVFFCK 285
++N+ P+V++L S ++ A+R +N + RP L H I+
Sbjct: 297 LKNISDDDLQPVVSVLKIFLSSHRSATRFSAIRTLNELAMTRPH-LVHSCNLNIESLITD 355
Query: 286 YNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERA 345
N I + ++K +D ++D+++ + + +++ +F V AI +K R
Sbjct: 356 VNRSIATYA--ITTLLKTGNDESVDRLMKQIVTFMSDISDNFKIIVVDAIRSLCLKFPRK 413
Query: 346 AERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
+ ++ L ++ + Y + A + I D+ + P + E +A LCE ++ + P+
Sbjct: 414 QDSMLTFLSNILCDEGGYEFKRAAVDAISDMIKYIPESKERALAELCEFIEDCEYPKIAV 473
Query: 405 SMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQV 464
++ I+GE + A V+ ++A K L + Q+ ++V
Sbjct: 474 RILSILGEEGPKASEPTRFIRYIYNRIMLENAIVRSAAVSALTKFGLNAEDKFVQRSVKV 533
Query: 465 VLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEK 504
+L + D+ ++RDRA + L D +A VV ++K
Sbjct: 534 ILTRCLEDADD-EVRDRAAFSVKALE-DRDAFLPVVKSDK 571
Score = 61 (26.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/117 (23%), Positives = 52/117 (44%)
Query: 5 KDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI-R 63
K + LF + Q ++ L++ VY+ + + D+ I+ ++ +KD+ I R
Sbjct: 60 KQATELFFGITKLFQHKDPSLRQFVYIIIKELSVVAEDV-IMITSSIMKDTATGRETIYR 118
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDD--DPY--VRKTAAICVAKLYDINAELV 116
A+R++ IRV I ++R L DP V A + LY + ++V
Sbjct: 119 PNAIRSL--IRV--IDANTVPAIERILTTGIVDPISAVASAALVSAYHLYPVAKDIV 171
>UNIPROTKB|F5GYB0 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
HGNC:HGNC:567 EMBL:AC105339 EMBL:FJ695193 IPI:IPI01015207
ProteinModelPortal:F5GYB0 SMR:F5GYB0 Ensembl:ENST00000542200
ArrayExpress:F5GYB0 Bgee:F5GYB0 Uniprot:F5GYB0
Length = 141
Score = 142 (55.0 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 29/75 (38%), Positives = 51/75 (68%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + ++P ++
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKEP-VVMA 126
Query: 64 ALAVRTMGCIRVDKI 78
A ++ + RV+ +
Sbjct: 127 ASSMNHLSPRRVESL 141
>UNIPROTKB|E1C7T8 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958
OMA:SEEGHES EMBL:AADN02039801 IPI:IPI00596855 RefSeq:XP_414981.2
Ensembl:ENSGALT00000013228 GeneID:416685 KEGG:gga:416685
NextBio:20820109 Uniprot:E1C7T8
Length = 871
Score = 166 (63.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 85/486 (17%), Positives = 192/486 (39%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + A D+ I+ ++ KD + R
Sbjct: 65 EATEAFFAMTRLFQSNDQTLRRMCYLTIKEMANISEDV-IIVTSSLTKDMTGKEDVYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I + + + +++ + D P V +A + + I+ ++V+ R E+
Sbjct: 124 AIRALCRITDGTMLQAIERYMKQAIVDKVPSVSSSALVSSLHMMKISYDVVK-RWINEAQ 182
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
+ SD + T S L + C + I A
Sbjct: 183 EAASSDNIMVQYHALGLLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYC-----MLIRIAS 237
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPP 245
K ++ + + + L++ + V+ A I+ L T R L ++
Sbjct: 238 KLLKESEEGHESPLFDFIESCLRNKHEMVIYEAASAIIH---LPNCT--ARELAPAVSVL 292
Query: 246 LVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 304
+ S +P ++Y A+R +N + + P+ + A + + + + + ++K
Sbjct: 293 QLFCSSPKPVLRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTG 352
Query: 305 SDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYV 364
S+ ++D+++ + + +E+ +F V+AI K R ++ L +++ +
Sbjct: 353 SESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFE 412
Query: 365 VQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADXX 423
+ AI+ I I P + ES +A LCE ++ + ++ ++G+ R +
Sbjct: 413 YKRAIVDCIISIIEENPESKESGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPSPSKY 472
Query: 424 XXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAY 483
V+ ++A K + P I V+L +++D+ ++RDRA
Sbjct: 473 IRFIFNRVVLENEAVRAAAVSALAKFGAQNENLLPS--ILVLLQRCMMDSDD-EVRDRAT 529
Query: 484 IYWRLL 489
Y +L
Sbjct: 530 FYLNVL 535
>TAIR|locus:2125259 [details] [associations]
symbol:AT4G31490 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISS] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 GO:GO:0005829
GO:GO:0006886 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016020 GO:GO:0016192 GO:GO:0005198
eggNOG:COG5096 GO:GO:0030126 EMBL:AL080283 EMBL:AL161579
EMBL:AK228881 IPI:IPI00528352 PIR:T10679 RefSeq:NP_194877.2
UniGene:At.47266 ProteinModelPortal:Q9SV20 SMR:Q9SV20 IntAct:Q9SV20
STRING:Q9SV20 PaxDb:Q9SV20 PRIDE:Q9SV20 EnsemblPlants:AT4G31490.1
GeneID:829276 KEGG:ath:AT4G31490 TAIR:At4g31490
HOGENOM:HOG000207417 InParanoid:Q9SV20 OMA:NDIHVDI PhylomeDB:Q9SV20
ProtClustDB:CLSN2685858 Genevestigator:Q9SV20 PANTHER:PTHR10635
Uniprot:Q9SV20
Length = 948
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 77/429 (17%), Positives = 179/429 (41%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYL--INYAKSQ----PDLAILAVNTFVKDSQ 56
G+ + LF ++ + +E+ ++KL+ LYL I S+ P++ ++ N + Q
Sbjct: 48 GETIPQLFITIIRYVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEMILICQN-LRNNLQ 106
Query: 57 DPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELV 116
PN IR + +R + ++ +I E L + + L+ P+VR+ A + + +Y +
Sbjct: 107 HPNEYIRGVTLRFLCRMKETEIVEPLTPSVLQNLEHRHPFVRRNAILAIMSIYKLPHG-- 164
Query: 117 EDRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEW 176
D+ F+++ ++I + ++ LL+ +++ ++W
Sbjct: 165 -DQLFVDA-PEMIEKVLSTEQDPSAKRNAFLMLFTCAE-----ERAVNYLLSNVDKVSDW 217
Query: 177 G---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTD 233
Q+ +L+ + E ++ + L + AV+ ++ T+
Sbjct: 218 NESLQMVVLELIRSVCKTKPAEKGKYIKIIISLLSATSSAVIYECAGTLVSLSSAPTAIR 277
Query: 234 VVRNL-CKKMAPPLVTLLSAEPEIQYVAL-RNINLIVQRRPTILAHEIKVFFCKYNDPIY 291
N C+ + L ++ ++ + L R L R ++ I V + +
Sbjct: 278 AAANTYCQLL------LSQSDNNVKLILLDRLYELKTLHRDIMVELIIDVLRALSSPNLD 331
Query: 292 VKMEKLEIMIKLASDRNIDQVLLEFKEYAT-------EVDVDFVRKAVRAIGRCAIKLER 344
++ + L+I + L + NI++V+ K+ E + ++ + ++AI CA+K
Sbjct: 332 IRRKTLDIALDLITHHNINEVVQMLKKEVVKTQSGELEKNGEYRQMLIQAIHACAVKFPE 391
Query: 345 AAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
A + +L++ + + ++ +++I P SII L ++ + +
Sbjct: 392 VASTVVHLLMDFLGDSNVASALDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAGKVCP 451
Query: 405 SMIWIIGEY 413
+WIIGEY
Sbjct: 452 CALWIIGEY 460
>ZFIN|ZDB-GENE-030131-3187 [details] [associations]
symbol:ap1g1 "adaptor-related protein complex 1,
gamma 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153
ZFIN:ZDB-GENE-030131-3187 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 EMBL:CU914549 IPI:IPI01024413
Ensembl:ENSDART00000150062 ArrayExpress:F8W5I5 Uniprot:F8W5I5
Length = 821
Score = 116 (45.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 84 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGE 143
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+S+
Sbjct: 144 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLSE 187
Score = 98 (39.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 34/170 (20%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 319 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 378
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + D +F I A K + I ++ ++ +YV +
Sbjct: 379 NIRGMMKELLYFLDSCDPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 438
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
++ + + + + L ++L D +P + + W IGEY +
Sbjct: 439 SVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQVAS-WCIGEYGD 487
>DICTYBASE|DDB_G0281957 [details] [associations]
symbol:ap1g1 "gamma adaptin" species:44689
"Dictyostelium discoideum" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030276 "clathrin binding" evidence=IPI]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IDA] [GO:0030121 "AP-1 adaptor complex" evidence=IDA]
[GO:0006895 "Golgi to endosome transport" evidence=IDA] [GO:0044431
"Golgi apparatus part" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 dictyBase:DDB_G0281957
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 GO:GO:0030121 SUPFAM:SSF49348 HSSP:P22892
eggNOG:NOG303101 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 EMBL:AY144597
EMBL:AAFI02000044 RefSeq:XP_640382.1 ProteinModelPortal:Q8I8U2
SMR:Q8I8U2 STRING:Q8I8U2 EnsemblProtists:DDB0214928 GeneID:8623337
KEGG:ddi:DDB_G0281957 OMA:NTECAYI GO:GO:0006895 Uniprot:Q8I8U2
Length = 895
Score = 161 (61.7 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 81/412 (19%), Positives = 161/412 (39%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL L+ + ++ +LA N D + N I +++ G I + +
Sbjct: 80 KRIGYLGLMLLLDEKQEVLLLATNCIRGDIMNSNQFIVGVSLCAFGNICSTAMARDISPE 139
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDXXXXXXXXXXXXXX 145
+++ + +PY+RK AA+C ++ +L E+ ++ +K L+S+
Sbjct: 140 IEKVISHSNPYIRKKAALCAIRVLRKVPDLTEN--YIPKIKALLSERNHAVILTALTLII 197
Query: 146 XXXXXSSRPIFEITSHTLSKLLTALNECTEWG---------------QVFILDALSRYKA 190
S I + +L+ L T G QV IL L R
Sbjct: 198 EICEMDSTQIIHFKK-MVPQLVRILKSLTSSGYLPEHDIGGVTDPFLQVKILRLL-RILG 255
Query: 191 ADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVT-- 248
+ EA + + + ++ N + IL + T N K MA ++
Sbjct: 256 QNDPEASDAMNDILAQVS-TNTDSTKNVGNAILYECVQTIMTIESENGLKVMAINILGRF 314
Query: 249 LLSAEPEIQYVALRNINLIVQRR-PTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ +V + H + C + + ++ L+++ L ++
Sbjct: 315 LLNRDNNIRYVALNTLSRVVNTDIQAVQRHRNTIVECLKDPDVSIRCRALDLIYSLVTES 374
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERC--ISVLLELIKIKVNYVV 365
NI ++ E + D F + V + C + + A + I +L ++ I N++
Sbjct: 375 NIRVLVRELLNFLLIADAQFKSELVAKL--CIVTEKYAPNKRWQIDTILRVMSIAGNFIP 432
Query: 366 QEAIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
E + + P + L +L D +P + + W IGEY +
Sbjct: 433 DEVPSNLIQLISSTPELSSYAVQKLYLALKQDITQQPLTQVGL-WCIGEYGD 483
>WB|WBGene00000161 [details] [associations]
symbol:apa-2 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0005886
GO:GO:0009792 GO:GO:0006898 GO:GO:0040010 GO:GO:0006886
GO:GO:0008104 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0040011 GO:GO:0030131 SUPFAM:SSF55711
SUPFAM:SSF49348 eggNOG:NOG303101 HSSP:P17427 HOGENOM:HOG000170596
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
GeneTree:ENSGT00550000074757 GO:GO:0045334 EMBL:FO081025 PIR:T16911
RefSeq:NP_509572.1 ProteinModelPortal:Q22601 SMR:Q22601
IntAct:Q22601 STRING:Q22601 PaxDb:Q22601 EnsemblMetazoa:T20B5.1.1
EnsemblMetazoa:T20B5.1.2 GeneID:181163 KEGG:cel:CELE_T20B5.1
UCSC:T20B5.1.1 CTD:181163 WormBase:T20B5.1 InParanoid:Q22601
NextBio:912676 Uniprot:Q22601
Length = 925
Score = 109 (43.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 29/131 (22%), Positives = 62/131 (47%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + Q DL L V D NP+
Sbjct: 67 LGNDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLIEQQSDLMKLIVQGIRNDLTSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDP--YVRKTAAICVAKLYDINAELVEDRG 120
LA++ + + ++ E C L + L + +V+++AA+C+ KL+ + + +
Sbjct: 127 VNLALQCISNMGSREMVEAFCTDLPKLLVSGETIDFVKQSAALCILKLFRNSPDSFQPGD 186
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 187 YASRIVHLLND 197
Score = 102 (41.0 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 62/327 (18%), Positives = 128/327 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALR 262
++QH+N AV+ A+ +I+ M+ + ++ C ++ T LS E ++Y+AL
Sbjct: 298 KVQHSNAKNAVLFEAIALIIH-MD--SEPQLLVRACNQLG----TFLSHRETNLRYLALE 350
Query: 263 NINLIVQRR---PTILAHEIKVF-FCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
++ L+ + H+ + K + V+ ++++ + N +Q++ E
Sbjct: 351 SMCLLATSEFSHDAVKKHQDTIINSLKTERDVSVRQRAVDLLYAMCDRSNANQIVAEMLA 410
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFR 377
Y D + V + A K + V+L+LI+I +YV +E VI+ +
Sbjct: 411 YLETADYSIREEMVLKVAILAEKYATDYTWYVDVILKLIRIAGDYVSEEVWYRVIQIVVN 470
Query: 378 RYPNTYESIIATLCESL-DTLDEPEAKASMI----WIIGEYAERI-----DNADXXXXXX 427
R E + +++ + L P +M+ +I+GE+ I A
Sbjct: 471 R-----EDVQGYAAKTVFEALQRPACHENMVKVGGYILGEFGNFIAGDERSTAKIQFELL 525
Query: 428 XXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWR 487
+ LLT +K P P QV + + + +L+ R+ Y +
Sbjct: 526 HSKFHLCSITTRCLLLTTYIKFCNLFPEIKPLVQ-QVFQTDHNLRNPDAELQQRSIEYLQ 584
Query: 488 LLSTDPEAAKDVVLAEKPVISDDSNQL 514
+ +L P ++ + L
Sbjct: 585 MTKLASNDVLATILEVMPAFAEKESSL 611
>UNIPROTKB|Q22601 [details] [associations]
symbol:apa-2 "Protein APA-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
GO:GO:0005886 GO:GO:0009792 GO:GO:0006898 GO:GO:0040010
GO:GO:0006886 GO:GO:0008104 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0040011 GO:GO:0030131
SUPFAM:SSF55711 SUPFAM:SSF49348 eggNOG:NOG303101 HSSP:P17427
HOGENOM:HOG000170596 KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030
Gene3D:3.30.310.30 GeneTree:ENSGT00550000074757 GO:GO:0045334
EMBL:FO081025 PIR:T16911 RefSeq:NP_509572.1
ProteinModelPortal:Q22601 SMR:Q22601 IntAct:Q22601 STRING:Q22601
PaxDb:Q22601 EnsemblMetazoa:T20B5.1.1 EnsemblMetazoa:T20B5.1.2
GeneID:181163 KEGG:cel:CELE_T20B5.1 UCSC:T20B5.1.1 CTD:181163
WormBase:T20B5.1 InParanoid:Q22601 NextBio:912676 Uniprot:Q22601
Length = 925
Score = 109 (43.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 29/131 (22%), Positives = 62/131 (47%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + Q DL L V D NP+
Sbjct: 67 LGNDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLIEQQSDLMKLIVQGIRNDLTSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDP--YVRKTAAICVAKLYDINAELVEDRG 120
LA++ + + ++ E C L + L + +V+++AA+C+ KL+ + + +
Sbjct: 127 VNLALQCISNMGSREMVEAFCTDLPKLLVSGETIDFVKQSAALCILKLFRNSPDSFQPGD 186
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 187 YASRIVHLLND 197
Score = 102 (41.0 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 62/327 (18%), Positives = 128/327 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALR 262
++QH+N AV+ A+ +I+ M+ + ++ C ++ T LS E ++Y+AL
Sbjct: 298 KVQHSNAKNAVLFEAIALIIH-MD--SEPQLLVRACNQLG----TFLSHRETNLRYLALE 350
Query: 263 NINLIVQRR---PTILAHEIKVF-FCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE 318
++ L+ + H+ + K + V+ ++++ + N +Q++ E
Sbjct: 351 SMCLLATSEFSHDAVKKHQDTIINSLKTERDVSVRQRAVDLLYAMCDRSNANQIVAEMLA 410
Query: 319 YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFR 377
Y D + V + A K + V+L+LI+I +YV +E VI+ +
Sbjct: 411 YLETADYSIREEMVLKVAILAEKYATDYTWYVDVILKLIRIAGDYVSEEVWYRVIQIVVN 470
Query: 378 RYPNTYESIIATLCESL-DTLDEPEAKASMI----WIIGEYAERI-----DNADXXXXXX 427
R E + +++ + L P +M+ +I+GE+ I A
Sbjct: 471 R-----EDVQGYAAKTVFEALQRPACHENMVKVGGYILGEFGNFIAGDERSTAKIQFELL 525
Query: 428 XXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWR 487
+ LLT +K P P QV + + + +L+ R+ Y +
Sbjct: 526 HSKFHLCSITTRCLLLTTYIKFCNLFPEIKPLVQ-QVFQTDHNLRNPDAELQQRSIEYLQ 584
Query: 488 LLSTDPEAAKDVVLAEKPVISDDSNQL 514
+ +L P ++ + L
Sbjct: 585 MTKLASNDVLATILEVMPAFAEKESSL 611
>GENEDB_PFALCIPARUM|PF11_0463 [details] [associations]
symbol:PF11_0463 "coat protein, gamma subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0005829
"cytosol" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 EMBL:AE014186
HOGENOM:HOG000184434 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 RefSeq:XP_001348130.1
ProteinModelPortal:Q8IHR6 PRIDE:Q8IHR6
EnsemblProtists:PF11_0463:mRNA GeneID:811006 KEGG:pfa:PF11_0463
EuPathDB:PlasmoDB:PF3D7_1145100 OMA:EDVEYSP ProtClustDB:CLSZ2433713
Uniprot:Q8IHR6
Length = 1068
Score = 112 (44.5 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 30/119 (25%), Positives = 63/119 (52%)
Query: 5 KDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRA 64
++ + +F + Q+ N L++++YL + N S+ ++ I+ ++ KD N RA
Sbjct: 76 QECTDIFFSITKLFQSNNERLRRMIYLLIKNLPVSEKEIFIVT-SSLTKDMNSANDCYRA 134
Query: 65 LAVRTMGCIRVDKITEY-LCDPLQRCLK----DDDPYVRKTAAICVAKLYD-INAELVE 117
A+R + KI ++ L ++R LK D +P+V +A +C LY+ ++++V+
Sbjct: 135 NAIRVLS-----KIIDFSLATQIERYLKTAVVDRNPFVSTSALLCGLNLYNNTSSDIVK 188
Score = 107 (42.7 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 54/290 (18%), Positives = 121/290 (41%)
Query: 229 ITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILA---HEIKVFFCK 285
+ + D++ N C K+ + LLS++ ++ +R IN + RP +++ +I+
Sbjct: 393 VFNVDIL-NECIKVCQ--LFLLSSKIVDKFSIIRQINKLAHHRPYVVSKLNQDIENLLYD 449
Query: 286 YNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERA 345
N I V ++K ++ +ID++L + Y T + F K + +
Sbjct: 450 NNKSICVLA--FTTLLKTGNETSIDKLLNQINNYMTADNTTFKIKIIEEVKNLCFIYPNK 507
Query: 346 AERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
++ L ++ +Y + + I I I PN E+ I LCE ++ +
Sbjct: 508 CNIILNFLSNNLRDDESYQFKASTIDSIILIITNLPNAEETAILQLCEFIEDCEYHALLL 567
Query: 405 SMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQV 464
+I + + + N + +++ + A + LK E + ++ V
Sbjct: 568 KVIRFLLMHIPKTKNPSKYIRYIYNRLLLENSTIRIDGMYALFYIALKC-AENSKDIL-V 625
Query: 465 VLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL 514
+LN + D+ ++RDR ++ +L E K++ + K + ++ +L
Sbjct: 626 LLNCLLADNDD-EVRDRTNFFYYMLK---EKIKELDTSNKQISNEYEEKL 671
Score = 37 (18.1 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 170 LNECTEWGQVFILDA 184
LNEC + Q+F+L +
Sbjct: 399 LNECIKVCQLFLLSS 413
>UNIPROTKB|Q8IHR6 [details] [associations]
symbol:PF11_0463 "Coatomer subunit gamma" species:36329
"Plasmodium falciparum 3D7" [GO:0005829 "cytosol" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0005829
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 EMBL:AE014186 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 RefSeq:XP_001348130.1 ProteinModelPortal:Q8IHR6
PRIDE:Q8IHR6 EnsemblProtists:PF11_0463:mRNA GeneID:811006
KEGG:pfa:PF11_0463 EuPathDB:PlasmoDB:PF3D7_1145100 OMA:EDVEYSP
ProtClustDB:CLSZ2433713 Uniprot:Q8IHR6
Length = 1068
Score = 112 (44.5 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 30/119 (25%), Positives = 63/119 (52%)
Query: 5 KDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRA 64
++ + +F + Q+ N L++++YL + N S+ ++ I+ ++ KD N RA
Sbjct: 76 QECTDIFFSITKLFQSNNERLRRMIYLLIKNLPVSEKEIFIVT-SSLTKDMNSANDCYRA 134
Query: 65 LAVRTMGCIRVDKITEY-LCDPLQRCLK----DDDPYVRKTAAICVAKLYD-INAELVE 117
A+R + KI ++ L ++R LK D +P+V +A +C LY+ ++++V+
Sbjct: 135 NAIRVLS-----KIIDFSLATQIERYLKTAVVDRNPFVSTSALLCGLNLYNNTSSDIVK 188
Score = 107 (42.7 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 54/290 (18%), Positives = 121/290 (41%)
Query: 229 ITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILA---HEIKVFFCK 285
+ + D++ N C K+ + LLS++ ++ +R IN + RP +++ +I+
Sbjct: 393 VFNVDIL-NECIKVCQ--LFLLSSKIVDKFSIIRQINKLAHHRPYVVSKLNQDIENLLYD 449
Query: 286 YNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERA 345
N I V ++K ++ +ID++L + Y T + F K + +
Sbjct: 450 NNKSICVLA--FTTLLKTGNETSIDKLLNQINNYMTADNTTFKIKIIEEVKNLCFIYPNK 507
Query: 346 AERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
++ L ++ +Y + + I I I PN E+ I LCE ++ +
Sbjct: 508 CNIILNFLSNNLRDDESYQFKASTIDSIILIITNLPNAEETAILQLCEFIEDCEYHALLL 567
Query: 405 SMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQV 464
+I + + + N + +++ + A + LK E + ++ V
Sbjct: 568 KVIRFLLMHIPKTKNPSKYIRYIYNRLLLENSTIRIDGMYALFYIALKC-AENSKDIL-V 625
Query: 465 VLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL 514
+LN + D+ ++RDR ++ +L E K++ + K + ++ +L
Sbjct: 626 LLNCLLADNDD-EVRDRTNFFYYMLK---EKIKELDTSNKQISNEYEEKL 671
Score = 37 (18.1 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 170 LNECTEWGQVFILDA 184
LNEC + Q+F+L +
Sbjct: 399 LNECIKVCQLFLLSS 413
>FB|FBgn0001087 [details] [associations]
symbol:g "garnet" species:7227 "Drosophila melanogaster"
[GO:0006726 "eye pigment biosynthetic process"
evidence=IEP;IMP;IDA] [GO:0006727 "ommochrome biosynthetic process"
evidence=IMP] [GO:0008055 "ocellus pigment biosynthetic process"
evidence=IDA] [GO:0008057 "eye pigment granule organization"
evidence=IMP] [GO:0030131 "clathrin adaptor complex" evidence=ISS]
[GO:0030123 "AP-3 adaptor complex" evidence=NAS] [GO:0005798
"Golgi-associated vesicle" evidence=NAS] [GO:0006895 "Golgi to
endosome transport" evidence=NAS] [GO:0007041 "lysosomal transport"
evidence=TAS] [GO:0007040 "lysosome organization" evidence=ISS]
[GO:0005795 "Golgi stack" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0046907 "intracellular transport"
evidence=TAS] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0048072 "compound eye pigmentation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0007220 "Notch receptor processing" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005770 "late endosome"
evidence=IDA] [GO:0060967 "negative regulation of gene silencing by
RNA" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005783
GO:GO:0008340 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0008565 EMBL:AE014298
GO:GO:0005795 GO:GO:0006897 GO:GO:0007040 GO:GO:0005770
GO:GO:0005798 GO:GO:0007220 eggNOG:COG5096 GO:GO:0030665
GO:GO:0006895 GO:GO:0007041 GO:GO:0030123 KO:K12396
InterPro:IPR010474 Pfam:PF06375 EMBL:AF002164 EMBL:AF044287
EMBL:U31351 RefSeq:NP_524785.2 ProteinModelPortal:P54362 SMR:P54362
IntAct:P54362 MINT:MINT-948300 STRING:P54362 PaxDb:P54362
GeneID:44819 KEGG:dme:Dmel_CG10986 UCSC:CG10986-RB CTD:44819
FlyBase:FBgn0001087 InParanoid:P54362 OrthoDB:EOG4RJDGF ChiTaRS:g
GenomeRNAi:44819 NextBio:837685 Bgee:P54362 GermOnline:CG10986
GO:GO:0048072 GO:GO:0008057 GO:GO:0060967 GO:GO:0006727
Uniprot:P54362
Length = 1034
Score = 160 (61.4 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 74/437 (16%), Positives = 180/437 (41%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M + K++ YL +L +L N KD N
Sbjct: 69 LGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYD 128
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C ++ L + + + PY+R A + + K++ E + R
Sbjct: 129 AGVALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEAL--RPAF 186
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + + T+ N W + I+
Sbjct: 187 PKLKEKLEDPDPGVQSAAVNVICELARKNPKNYLPLAPIFFKLMTTSTNN---WMLIKII 243
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--SAVKMILQQMELITSTDVVRNLCK 240
+ R + ++E +T L H+ A+ L + ++ + I+S +
Sbjct: 244 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECINTVIAVLISISSGMPNHSASI 302
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
++ + +L ++ ++Y+ L ++ I++ P ++ AH+ + C + +++ L
Sbjct: 303 QLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQAHKDLILACLDDKDESIRLRAL 362
Query: 298 EIMIKLASDRNIDQV---LLEFKEYA--TEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
+++ + S +N+ ++ LL E A + + + K + + + E ++V
Sbjct: 363 DLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRDELLYKVIEICAQSSYLYVTNFEWYLTV 422
Query: 353 LLELIKIKVNY----VVQEAI--IVIK-DIFRRYP-NTYESIIATLCESLDTLDEPEAKA 404
L+ELI+++ ++ E + + I+ + R++ N +++ T S + E
Sbjct: 423 LVELIQLEAGSRHGRLIAEQLLDVAIRVPVVRQFAVNEMTNLLDTFTVSAQSNSMYEVLY 482
Query: 405 SMIWIIGEYAERIDNAD 421
+ WI+GE+A +++A+
Sbjct: 483 AAAWIVGEFAGELEDAE 499
>DICTYBASE|DDB_G0284735 [details] [associations]
symbol:copB "coatomer protein complex beta subunit"
species:44689 "Dictyostelium discoideum" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IEA;IDA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 dictyBase:DDB_G0284735
GO:GO:0005794 GO:GO:0048471 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077
GenomeReviews:CM000153_GR GO:GO:0016192 GO:GO:0005198
EMBL:AAFI02000071 eggNOG:COG5096 GO:GO:0030126 PANTHER:PTHR10635
OMA:DFEWENK EMBL:AF247143 EMBL:U62960 RefSeq:XP_638375.1
ProteinModelPortal:Q23924 STRING:Q23924 PRIDE:Q23924
EnsemblProtists:DDB0191250 GeneID:8624744 KEGG:ddi:DDB_G0284735
ProtClustDB:CLSZ2430217 Uniprot:Q23924
Length = 912
Score = 159 (61.0 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 79/432 (18%), Positives = 177/432 (40%)
Query: 4 GKDVSSLFTDVV-NCMQTENLELKKLVYLY--LI---NYAKSQPDLAILAVNTFVKDSQD 57
G+ + L ++ M + + +KKL+ +Y +I + K + ++ IL N+ + D
Sbjct: 57 GEPIPQLLMPIILYVMPSNDHTIKKLLLIYWEVIEKTHLGKLKSEM-ILVCNSLLNDLNH 115
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN +R +R + +R ++ E L ++ L++ Y R+ A + + +Y L+
Sbjct: 116 PNEFVRGSTLRFLCKLREAEVLEPLVPSVRSNLENRHAYCRRNAVLAIYNIYSHFDYLIP 175
Query: 118 DRGFLESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWG 177
D +LI + + P E LS +L + +
Sbjct: 176 DA------PELIYNFLLQEKDASCKRNAFIMLFNCAP--EKAVEYLSSVLDEVPSFGDML 227
Query: 178 QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRN 237
Q +++ + + E ++ + L ++ AV + +L L ++ VR
Sbjct: 228 QFIVVELIRKVCKTSPSERSKYIKCIFTLLNSSSPAVKYESAGTLLS---LSSAPTAVRG 284
Query: 238 LCKKMAPPLVTLLSAEPE--IQYVALRNINLIVQRRPTILAHEIKVFFCKYNDP-IYVKM 294
A + LL E + ++ + L + I + I+ + + P I +
Sbjct: 285 A----ASAYIDLLCNESDNNVKMIVLDKLIEIKKNHSKIMEELVMDILRALSSPNIDICK 340
Query: 295 EKLEIMIKLASDRNIDQVLLEFKE-----YATEVD--VDFVRKAVRAIGRCAIKLERAAE 347
+ L I++ + +NID+++L K+ + E D +++ +R I ++K
Sbjct: 341 KVLNIVLDSVTPKNIDEIILFLKKEINKTQSKEFDKGLEYRHILIRTIHVSSLKYPEVLG 400
Query: 348 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 407
+ +L+E + + +I ++++ YP+ E II L E+L ++ + +
Sbjct: 401 NVVPLLMEYLGDSYLPSAVDVVIFLREVVETYPSLRELIIKKLIENLSSIKVSKVYRVAV 460
Query: 408 WIIGEYAERIDN 419
W+I EY +++
Sbjct: 461 WVIAEYVTCLED 472
>UNIPROTKB|O43747 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0055037 "recycling endosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005215
"transporter activity" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=TAS] [GO:0019894 "kinesin binding" evidence=IPI]
[GO:0030136 "clathrin-coated vesicle" evidence=IDA] [GO:0000139
"Golgi membrane" evidence=TAS] [GO:0005765 "lysosomal membrane"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006892
"post-Golgi vesicle-mediated transport" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=TAS] [GO:0032588 "trans-Golgi network membrane"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] [GO:0030665 "clathrin-coated vesicle
membrane" evidence=ISS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0005829 GO:GO:0048471
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006886
GO:GO:0000139 GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005765 GO:GO:0032588
GO:GO:0019886 GO:GO:0008565 GO:GO:0006897 GO:GO:0005215
GO:GO:0055037 GO:GO:0030131 GO:GO:0030665 SUPFAM:SSF49348
GO:GO:0016044 GO:GO:0006892 eggNOG:NOG303101 HOGENOM:HOG000210271
KO:K12391 Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
EMBL:Y12226 EMBL:AJ224112 EMBL:AJ224113 EMBL:AJ224114 EMBL:AB015317
EMBL:AC009097 EMBL:AC010653 EMBL:AL050025 EMBL:AL110198
IPI:IPI00293396 IPI:IPI00939879 RefSeq:NP_001025178.1
RefSeq:NP_001119.3 UniGene:Hs.461253 PDB:1IU1 PDBsum:1IU1
ProteinModelPortal:O43747 SMR:O43747 IntAct:O43747
MINT:MINT-3369703 STRING:O43747 PhosphoSite:O43747 PaxDb:O43747
PRIDE:O43747 DNASU:164 Ensembl:ENST00000299980
Ensembl:ENST00000393512 Ensembl:ENST00000569748 GeneID:164
KEGG:hsa:164 UCSC:uc010cgg.3 UCSC:uc021tky.1 CTD:164
GeneCards:GC16M071762 HGNC:HGNC:555 HPA:CAB009049 MIM:603533
neXtProt:NX_O43747 PharmGKB:PA24845 HOVERGEN:HBG067473
OrthoDB:EOG4ZGPBP ChiTaRS:AP1G1 EvolutionaryTrace:O43747
GenomeRNAi:164 NextBio:659 PMAP-CutDB:O43747 ArrayExpress:O43747
Bgee:O43747 CleanEx:HS_AP1G1 Genevestigator:O43747
GermOnline:ENSG00000166747 GO:GO:0030119 Uniprot:O43747
Length = 822
Score = 114 (45.2 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
Score = 94 (38.1 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 33/170 (19%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 317 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 376
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 377 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 436
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 437 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 485
>MGI|MGI:101919 [details] [associations]
symbol:Ap1g1 "adaptor protein complex AP-1, gamma 1 subunit"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005518 "collagen binding" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005802
"trans-Golgi network" evidence=IDA;TAS] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0006897
"endocytosis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=ISO] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0019894 "kinesin binding" evidence=ISO]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0030136 "clathrin-coated
vesicle" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0055037 "recycling endosome" evidence=ISO]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 MGI:MGI:101919
GO:GO:0048471 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0006897
GO:GO:0030136 GO:GO:0005802 GO:GO:0030131 GO:GO:0030665
SUPFAM:SSF49348 PDB:1W63 PDBsum:1W63 eggNOG:NOG303101
HOGENOM:HOG000210271 Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5
PROSITE:PS50180 HOVERGEN:HBG067473 OrthoDB:EOG4ZGPBP EMBL:X54424
IPI:IPI00621460 PIR:A36680 UniGene:Mm.37210 PDB:1GYU PDB:1GYV
PDB:1GYW PDB:2A7B PDB:3ZY7 PDBsum:1GYU PDBsum:1GYV PDBsum:1GYW
PDBsum:2A7B PDBsum:3ZY7 ProteinModelPortal:P22892 SMR:P22892
IntAct:P22892 MINT:MINT-200421 STRING:P22892 PhosphoSite:P22892
PaxDb:P22892 PRIDE:P22892 Ensembl:ENSMUST00000034171
UCSC:uc012gkl.1 GeneTree:ENSGT00390000012618
EvolutionaryTrace:P22892 Bgee:P22892 CleanEx:MM_AP1G1
Genevestigator:P22892 GO:GO:0044431 Uniprot:P22892
Length = 822
Score = 114 (45.2 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
Score = 94 (38.1 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 33/170 (19%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 317 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 376
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 377 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 436
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 437 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 485
>UNIPROTKB|J3KQU9 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 EMBL:AC009097 EMBL:AC010653
HGNC:HGNC:555 ChiTaRS:AP1G1 GO:GO:0044431 ProteinModelPortal:J3KQU9
Ensembl:ENST00000423132 Uniprot:J3KQU9
Length = 825
Score = 114 (45.2 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
Score = 94 (38.1 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 33/170 (19%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 320 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 379
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 380 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 439
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 440 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 488
>UNIPROTKB|B3KXW5 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 HOGENOM:HOG000210271
Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
EMBL:AC009097 EMBL:AC010653 UniGene:Hs.461253 HGNC:HGNC:555
HOVERGEN:HBG067473 ChiTaRS:AP1G1 GO:GO:0044431 EMBL:AK128078
IPI:IPI00643591 SMR:B3KXW5 STRING:B3KXW5 Ensembl:ENST00000433195
UCSC:uc002fbb.3 OMA:KIWYIDQ Uniprot:B3KXW5
Length = 845
Score = 114 (45.2 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 105 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGE 164
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 165 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 208
Score = 94 (38.1 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 33/170 (19%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 340 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 399
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 400 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 459
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 460 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 508
>UNIPROTKB|F1MF68 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 EMBL:DAAA02046759 IPI:IPI00686299 UniGene:Bt.3110
Ensembl:ENSBTAT00000003599 NextBio:20868171 Uniprot:F1MF68
Length = 822
Score = 113 (44.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
Score = 94 (38.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/170 (19%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 317 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 376
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 377 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 436
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 437 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 485
>UNIPROTKB|E2RPG3 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0030136 "clathrin-coated vesicle" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 CTD:164
GeneTree:ENSGT00390000012618 GO:GO:0044431 OMA:KIWYIDQ
EMBL:AAEX03004089 EMBL:AAEX03004087 EMBL:AAEX03004088
RefSeq:XP_862506.1 ProteinModelPortal:E2RPG3
Ensembl:ENSCAFT00000032187 GeneID:479666 KEGG:cfa:479666
NextBio:20854810 Uniprot:E2RPG3
Length = 822
Score = 113 (44.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
Score = 94 (38.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/170 (19%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 317 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 376
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 377 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 436
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 437 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 485
>UNIPROTKB|E9PU39 [details] [associations]
symbol:Ap1g1 "Protein Ap1g1" species:10116 "Rattus
norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 RGD:619785 GO:GO:0048471
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030136 GO:GO:0055037
GO:GO:0005802 GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GO:GO:0044431 IPI:IPI00951607
PRIDE:E9PU39 Ensembl:ENSRNOT00000021419 ArrayExpress:E9PU39
Uniprot:E9PU39
Length = 825
Score = 114 (45.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
Score = 93 (37.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 32/170 (18%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 320 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 379
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F + A K + I ++ ++ +YV +
Sbjct: 380 NIRGMMKELLYFLDSCEPEFKADCASGVFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 439
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 440 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 488
>UNIPROTKB|G3MZH4 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 CTD:164
GeneTree:ENSGT00390000012618 GO:GO:0044431 OMA:DCASGVF
EMBL:DAAA02046759 UniGene:Bt.3110 NextBio:20868171
RefSeq:NP_001178365.1 PRIDE:G3MZH4 Ensembl:ENSBTAT00000065037
GeneID:507677 KEGG:bta:507677 Uniprot:G3MZH4
Length = 825
Score = 113 (44.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
Score = 94 (38.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/170 (19%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 320 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 379
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 380 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 439
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 440 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 488
>UNIPROTKB|F1S3C7 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:KIWYIDQ EMBL:CU467029 EMBL:FP565416
Ensembl:ENSSSCT00000003036 Uniprot:F1S3C7
Length = 844
Score = 113 (44.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 104 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGE 163
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 164 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 207
Score = 94 (38.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/170 (19%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 339 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 398
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
NI ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 399 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 458
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 459 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA-WCIGEYGD 507
>UNIPROTKB|Q7QG73 [details] [associations]
symbol:alpha-Adaptin "AP-2 complex subunit alpha"
species:7165 "Anopheles gambiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005905 "coated pit" evidence=ISS] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0015031 "protein transport"
evidence=ISS] [GO:0048488 "synaptic vesicle endocytosis"
evidence=ISS] InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005905 GO:GO:0048488 GO:GO:0030131 SUPFAM:SSF55711
SUPFAM:SSF49348 eggNOG:NOG303101 HSSP:P17427 HOGENOM:HOG000170596
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
EMBL:AAAB01008839 RefSeq:XP_310153.4 ProteinModelPortal:Q7QG73
SMR:Q7QG73 STRING:Q7QG73 PRIDE:Q7QG73 EnsemblMetazoa:AGAP009538-RA
GeneID:1271372 KEGG:aga:AgaP_AGAP009538 VectorBase:AGAP009538
CTD:1271372 InParanoid:Q7QG73 OrthoDB:EOG42V6X5 PhylomeDB:Q7QG73
Uniprot:Q7QG73
Length = 934
Score = 106 (42.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 65/319 (20%), Positives = 132/319 (41%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + ++ C ++ L + E ++Y+AL +
Sbjct: 299 KVQHSNAKNAVLFEAINLIIHND---SEPSLLVRACNQLGQ---FLSNRETNLRYLALES 352
Query: 264 I-NLIVQR--RPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ +L + H E+ + K + V+ + ++++ + N ++++ E Y
Sbjct: 353 MCHLATSEFSHEAVKKHQEVVILSMKMEKDVSVRQQAVDLLYAMCDRSNAEEIVQEMLNY 412
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + V+L LI+I +YV +E VI+ + R
Sbjct: 413 LETADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINR 472
Query: 379 YPNTYESIIATLCESL-DTLDEPEAKASMI----WIIGEYAERI--DN--ADXXXXXXXX 429
E + +++ + L P +M+ +I+GE+ I D+ A
Sbjct: 473 -----EEVQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPMVQFKLLH 527
Query: 430 XXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRL- 488
+ + LL +T F+ E + V ++ + + + +L+ RA Y +L
Sbjct: 528 SKYHLCSSMTRALLLSTYIKFINLFPEIRGTIQDVFRQHSNLRSADAELQQRASEYLQLS 587
Query: 489 --LSTDPEAAKDVVLAEKP 505
STD A VL E P
Sbjct: 588 IVASTDVLAT---VLEEMP 603
Score = 102 (41.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/131 (20%), Positives = 61/131 (46%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ +++
Sbjct: 127 VNLALQCIANIGSQDMAEAFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRTCPDIIPGGE 186
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 187 WTSRIIHLLND 197
>FB|FBgn0264855 [details] [associations]
symbol:AP-2alpha "Adaptor Protein complex 2, alpha subunit"
species:7227 "Drosophila melanogaster" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0008021 "synaptic vesicle" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016183 "synaptic
vesicle coating" evidence=TAS] [GO:0030135 "coated vesicle"
evidence=TAS] [GO:0030122 "AP-2 adaptor complex" evidence=IMP;NAS]
[GO:0016192 "vesicle-mediated transport" evidence=NAS] [GO:0048489
"synaptic vesicle transport" evidence=TAS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008356
"asymmetric cell division" evidence=TAS] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0030100 "regulation of endocytosis"
evidence=IDA] [GO:0008565 "protein transporter activity"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AE014134 GO:GO:0022008
GO:GO:0008565 GO:GO:0008021 GO:GO:0045807 GO:GO:0007269
GO:GO:0030122 SUPFAM:SSF55711 SUPFAM:SSF49348 eggNOG:NOG303101
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
GeneTree:ENSGT00550000074757 OrthoDB:EOG42V6X5 EMBL:Y11104
EMBL:Y13092 EMBL:BT032839 EMBL:BT003458 RefSeq:NP_476819.2
RefSeq:NP_995607.1 UniGene:Dm.246 ProteinModelPortal:P91926
SMR:P91926 IntAct:P91926 STRING:P91926 PaxDb:P91926 PRIDE:P91926
EnsemblMetazoa:FBtr0089488 GeneID:33211 KEGG:dme:Dmel_CG4260
CTD:33211 FlyBase:FBgn0263350 InParanoid:P91926 GenomeRNAi:33211
NextBio:782454 Bgee:P91926 GermOnline:CG4260 GO:GO:0008356
GO:GO:0016183 Uniprot:P91926
Length = 940
Score = 106 (42.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 69/318 (21%), Positives = 131/318 (41%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +AV + + + LI +D NL + L LS E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAV--LFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESM 353
Query: 265 -NLIVQR--RPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+L + H E+ + K + V+ ++++ + N ++++ E Y
Sbjct: 354 CHLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRY 379
D + V + A K + V+L LI+I +YV +E VI+ + R
Sbjct: 414 ETADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINR- 472
Query: 380 PNTYESIIATLCESL-DTLDEPEAKASMI----WIIGEYAERI--DN--ADXXXXXXXXX 430
E + +++ + L P +M+ +I+GE+ I D+ A
Sbjct: 473 ----EEVQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHS 528
Query: 431 XXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRL-- 488
+ + LL +T F+ E + V ++ + + + +L+ RA Y +L
Sbjct: 529 KYHLCSPMTRALLLSTYIKFINLFPEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSI 588
Query: 489 -LSTDPEAAKDVVLAEKP 505
STD A VL E P
Sbjct: 589 VASTDVLAT---VLEEMP 603
Score = 102 (41.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/131 (20%), Positives = 62/131 (47%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ + +++
Sbjct: 127 VNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGE 186
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 187 WTSRIIHLLND 197
>ASPGD|ASPL0000072207 [details] [associations]
symbol:AN4547 species:162425 "Emericella nidulans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 EMBL:BN001303 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
HOGENOM:HOG000184434 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE
EnsemblFungi:CADANIAT00005891 Uniprot:C8V880
Length = 917
Score = 123 (48.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 35/198 (17%), Positives = 88/198 (44%)
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
++K ++ ++D+++ + + ++ +F V AI +K +S L +++
Sbjct: 365 LLKTGNEASVDRLMKQISGFMADITDEFKITIVEAIRTLCLKFPSKQAGMLSFLSGILRD 424
Query: 360 KVNYVVQEAIIV-IKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
+ Y + +++ + D+ + P + E +A LCE ++ + + ++ ++G +
Sbjct: 425 EGGYEFKRSVVESMFDLIKFVPESKEDALAHLCEFIEDCEFTKLSVRVLHLLGVEGPKTS 484
Query: 419 NADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
A V+ +TA K + + + + V+L +TD+ ++
Sbjct: 485 QPTKYIRYIYNRVVLENAIVRAAAVTALAKFGVGQKDPEVKSSVSVLLTRCLDDTDD-EV 543
Query: 479 RDRAYIYWRLLSTDPEAA 496
RDRA + RL++ + E A
Sbjct: 544 RDRAALNLRLMAEEDEMA 561
Score = 84 (34.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQ-DPNPLIRA 64
+ ++LF + Q ++ L+++VYL L A + D+ I++ + +KD+ + L RA
Sbjct: 60 EATTLFFGISKLFQNKDPSLRQMVYLILKELANTAEDV-IMSTSIIMKDTAVGSDVLYRA 118
Query: 65 LAVRTMGCIRVDKITEYLCDPL-QRCLKDDDPYVRKTAAICVAKLYDINAELV 116
A+R + C +D T + L + + D P V A + L I ++V
Sbjct: 119 NAIRAL-CRIIDATTVQGIERLIKTAIVDKTPSVSSAALVSSYHLLPIARDVV 170
>UNIPROTKB|F1NDA9 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0044431 "Golgi
apparatus part" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0030136 "clathrin-coated vesicle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:DCASGVF EMBL:AADN02054199 IPI:IPI00592100
Ensembl:ENSGALT00000001245 Uniprot:F1NDA9
Length = 820
Score = 113 (44.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
Score = 93 (37.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 32/170 (18%), Positives = 70/170 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQR-RPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
LL+ + I+YVAL ++ VQ + H + C + + +K +E+ L +
Sbjct: 319 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 378
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
N+ ++ E + + +F I A K + I ++ ++ +YV +
Sbjct: 379 NVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 438
Query: 368 AIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIWIIGEYAE 415
A+ + + + + L +++ D +P + + W IGEY +
Sbjct: 439 AVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAS-WCIGEYGD 487
>MGI|MGI:1858683 [details] [associations]
symbol:Copg2 "coatomer protein complex, subunit gamma 2"
species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 MGI:MGI:1858683 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 eggNOG:COG5240 GeneTree:ENSGT00390000016313
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 CTD:26958 EMBL:AF205065 EMBL:AJ251067
EMBL:AK088492 EMBL:AK149462 EMBL:AK163668 EMBL:BC049178
EMBL:BC145898 EMBL:BC145900 IPI:IPI00316359 IPI:IPI00896643
IPI:IPI00896657 IPI:IPI00896682 RefSeq:NP_059506.1
UniGene:Mm.381860 UniGene:Mm.39896 ProteinModelPortal:Q9QXK3
SMR:Q9QXK3 STRING:Q9QXK3 PhosphoSite:Q9QXK3 PaxDb:Q9QXK3
PRIDE:Q9QXK3 Ensembl:ENSMUST00000048774 Ensembl:ENSMUST00000166192
GeneID:54160 KEGG:mmu:54160 UCSC:uc009bfv.1 UCSC:uc012ejo.1
InParanoid:Q9QXK3 OMA:KETEEGH ChiTaRS:COPG2 NextBio:311000
Bgee:Q9QXK3 CleanEx:MM_COPG2 Genevestigator:Q9QXK3
GermOnline:ENSMUSG00000025607 Uniprot:Q9QXK3
Length = 871
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 85/486 (17%), Positives = 195/486 (40%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + A D+ I+ ++ KD + R
Sbjct: 65 EATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDV-IIVTSSLTKDMTGKEDVYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I + + + +++ + D V +A + + I+ ++V+ R E+
Sbjct: 124 AIRALCRITDGTMLQAVERYMKQAIVDKVSSVASSALVSSLHMMKISYDVVK-RWINEAQ 182
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
+ SD + T S L + C + I L
Sbjct: 183 EAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCM---LIRIASRL 239
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPP 245
+ ++ D E+ + + + L++ + V+ A I+ L T R L ++
Sbjct: 240 LK-ESEDGHESP-LFDFIESCLRNKHEMVIYEAASAIIH---LPNCT--ARELAPAVSVL 292
Query: 246 LVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 304
+ S +P ++Y A+R +N + + P+ + A + + + + + ++K
Sbjct: 293 QLFCSSPKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTG 352
Query: 305 SDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYV 364
S+ ++D+++ + + +E+ +F V+AI K R ++ L +++ +
Sbjct: 353 SESSVDRLMKQISSFVSEISDEFKVVVVQAISALCHKYPRKHSVMMTFLSNMLRDDGGFE 412
Query: 365 VQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADXX 423
++AI+ I I P + E+ +A LCE ++ + ++ ++G+ R
Sbjct: 413 YKKAIVDCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKY 472
Query: 424 XXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAY 483
V+ ++A K + + P I V+L ++TD+ ++RDRA
Sbjct: 473 IRFIFNRVVLENEAVRAAAVSALAKFGAQNESLLPS--ILVLLQRCMMDTDD-EVRDRAT 529
Query: 484 IYWRLL 489
Y +L
Sbjct: 530 FYLNVL 535
>WB|WBGene00021292 [details] [associations]
symbol:copb-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 GO:GO:0008340 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0032940 GO:GO:0016192
GO:GO:0005198 GO:GO:0000003 eggNOG:COG5096 GO:GO:0030126
HOGENOM:HOG000207417 PANTHER:PTHR10635 GeneTree:ENSGT00390000005270
OMA:DFEWENK EMBL:FO080207 PIR:T33907 RefSeq:NP_494441.1
ProteinModelPortal:Q9TYL9 SMR:Q9TYL9 STRING:Q9TYL9 PaxDb:Q9TYL9
EnsemblMetazoa:Y25C1A.5 GeneID:173656 KEGG:cel:CELE_Y25C1A.5
UCSC:Y25C1A.5.1 CTD:173656 WormBase:Y25C1A.5 InParanoid:Q9TYL9
NextBio:880553 Uniprot:Q9TYL9
Length = 971
Score = 109 (43.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 28/131 (21%), Positives = 59/131 (45%)
Query: 292 VKMEKLEIMIKLASDRNIDQVLL----EFKEYATEVDVD---FVRKAVRAIGRCAIKLER 344
V+ + L + + L S RN++ +++ E + ATE + + + ++ V+ + IK
Sbjct: 337 VRKKTLSLALDLVSSRNVEDMVMFLKKEINKTATESNDENGKYRQELVKTLHAATIKFPD 396
Query: 345 AAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
A + VL+E + + +++ + PN +I+ L E + + P
Sbjct: 397 VASTIVPVLMEFLSDTNEKASSYVLQFVREAVHKLPNLKNAILGALREGIPFIQSPTIFM 456
Query: 405 SMIWIIGEYAE 415
S +WI+ Y E
Sbjct: 457 SALWILATYCE 467
Score = 97 (39.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 32/121 (26%), Positives = 56/121 (46%)
Query: 5 KDVSSLFTDVVN-CMQTENLELKKLVYLY--LINYAKSQPDLA---ILAVNTFVKDSQDP 58
K S+ V+ C+ + LKK++ ++ + S L IL + + KD Q P
Sbjct: 54 KTSQSMLMYVIRFCLPSNEHTLKKVLLIFWECVPKTDSNGKLLHEMILVCDAYRKDLQHP 113
Query: 59 NPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAE-LVE 117
N +R +R + +R ++ E L ++ CL+ YVR+ A + +Y N E L+
Sbjct: 114 NEFVRGSTLRFLCKLREPELLEPLMPAIRACLEHRHSYVRRNAVCAIFTIYK-NFEFLIP 172
Query: 118 D 118
D
Sbjct: 173 D 173
>UNIPROTKB|Q9UBF2 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0006891 EMBL:CH236950
EMBL:CH471070 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 EMBL:AC007938 eggNOG:COG5240
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958 EMBL:AF207598
EMBL:AF157833 EMBL:AB047847 EMBL:AK291409 EMBL:AC090520
EMBL:AC009274 EMBL:BC017443 IPI:IPI00002557 RefSeq:NP_036265.3
UniGene:Hs.6421 ProteinModelPortal:Q9UBF2 SMR:Q9UBF2 IntAct:Q9UBF2
STRING:Q9UBF2 PhosphoSite:Q9UBF2 DMDM:13124090 PaxDb:Q9UBF2
PeptideAtlas:Q9UBF2 PRIDE:Q9UBF2 GeneID:26958 KEGG:hsa:26958
UCSC:uc003vqh.1 GeneCards:GC07M130146 H-InvDB:HIX0201202
HGNC:HGNC:2237 MIM:604355 neXtProt:NX_Q9UBF2 PharmGKB:PA26753
GenomeRNAi:26958 NextBio:49412 CleanEx:HS_COPG2
Genevestigator:Q9UBF2 Uniprot:Q9UBF2
Length = 871
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 85/486 (17%), Positives = 193/486 (39%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + A D+ I+ ++ KD + R
Sbjct: 65 EATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDV-IIVTSSLTKDMTGKEDVYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I + + + +++ + D V +A + + I+ ++V+ R E+
Sbjct: 124 AIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVK-RWINEAQ 182
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
+ SD + T S L + C + I L
Sbjct: 183 EAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCM---LIRIASRL 239
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPP 245
+ + D E+ + + + L++ + V+ A I+ L T R L ++
Sbjct: 240 LK-ETEDGHESP-LFDFIESCLRNKHEMVIYEAASAIIH---LPNCT--ARELAPAVSVL 292
Query: 246 LVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 304
+ S +P ++Y A+R +N + + P+ + A + + + + + ++K
Sbjct: 293 QLFCSSPKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTG 352
Query: 305 SDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYV 364
S+ ++D+++ + + +E+ +F V+AI K R ++ L +++ +
Sbjct: 353 SESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFE 412
Query: 365 VQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADXX 423
+ AI+ I I P + E+ +A LCE ++ + ++ ++G+ R
Sbjct: 413 YKRAIVDCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKY 472
Query: 424 XXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAY 483
V+ ++A K + + P I V+L ++TD+ ++RDRA
Sbjct: 473 IRFIFNRVVLENEAVRAAAVSALAKFGAQNESLLPS--ILVLLQRCMMDTDD-EVRDRAT 529
Query: 484 IYWRLL 489
Y +L
Sbjct: 530 FYLNVL 535
>UNIPROTKB|F1SNE9 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:SEEGHES
EMBL:CU915599 EMBL:FP236769 Ensembl:ENSSSCT00000018023
Uniprot:F1SNE9
Length = 871
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 82/494 (16%), Positives = 200/494 (40%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + A D+ I+ ++ KD + R
Sbjct: 65 EATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDV-IIVTSSLTKDMTGKEDVYRGP 123
Query: 66 AVRTMGCIRVDKITE-YLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLES 124
A+R + C +IT+ + ++R +K V K +++ ++ LV ++
Sbjct: 124 AIRAL-C----RITDGTMLQAIERYMKQ--AIVDKVSSVS-------SSALVSSLHMMKI 169
Query: 125 LKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSH---TLSKLLTALNEC---TEWGQ 178
D++ + ++ + + +SK+L +C +++
Sbjct: 170 SYDVVKRWVNEAQEAASSDNIMVQYHALGVLYHLKKNDRLAVSKMLNKFTKCGLKSQFAY 229
Query: 179 VFILDALSRYKAADAREAEN-IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRN 237
++ SR + E+ + + + L++ + V+ A I+ + + R
Sbjct: 230 CMLIRIASRLLKENEEGHESPVFDFIESCLRNKHEMVIYEAASAIIH----LPNCSA-RE 284
Query: 238 LCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEK 296
L ++ + S +P ++Y A+R +N + + P+ + A + + + +
Sbjct: 285 LAPAVSVLQLFCSSPKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLA 344
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLEL 356
+ ++K S+ ++D+++ + + +E+ +F V+AI K R ++ L +
Sbjct: 345 ITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNM 404
Query: 357 IKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAE 415
++ + + AI+ I +I P + E+ +A LCE ++ + ++ ++G+
Sbjct: 405 LRDDGGFEYKRAIVDCIINIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGP 464
Query: 416 RIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
R V+ ++A K + P I V+L ++TD+
Sbjct: 465 RTPVPSKYIRFIFNRVVLENEAVRAAAVSALAKFGAQNENLLPS--ILVLLQRCMMDTDD 522
Query: 476 PDLRDRAYIYWRLL 489
++RDRA Y +L
Sbjct: 523 -EVRDRATFYLNVL 535
>UNIPROTKB|Q29N38 [details] [associations]
symbol:alpha-Adaptin "AP-2 complex subunit alpha"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0005886
"plasma membrane" evidence=ISS] [GO:0005905 "coated pit"
evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0015031 "protein transport" evidence=ISS]
[GO:0048488 "synaptic vesicle endocytosis" evidence=ISS]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0005905 GO:GO:0048488
GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348 eggNOG:NOG303101
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
OrthoDB:EOG42V6X5 EMBL:CH379060 RefSeq:XP_001356441.1
ProteinModelPortal:Q29N38 SMR:Q29N38 GeneID:4817178
KEGG:dpo:Dpse_GA18063 FlyBase:FBgn0078071 InParanoid:Q29N38
Uniprot:Q29N38
Length = 939
Score = 106 (42.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 69/318 (21%), Positives = 131/318 (41%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +AV + + + LI +D NL + L LS E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAV--LFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESM 353
Query: 265 -NLIVQR--RPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+L + H E+ + K + V+ ++++ + N ++++ E Y
Sbjct: 354 CHLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRY 379
D + V + A K + V+L LI+I +YV +E VI+ + R
Sbjct: 414 ETADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINR- 472
Query: 380 PNTYESIIATLCESL-DTLDEPEAKASMI----WIIGEYAERI--DN--ADXXXXXXXXX 430
E + +++ + L P +M+ +I+GE+ I D+ A
Sbjct: 473 ----EEVQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHS 528
Query: 431 XXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRL-- 488
+ + LL +T F+ E + V ++ + + + +L+ RA Y +L
Sbjct: 529 KYHLCSPMTRALLLSTYIKFINLFPEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSI 588
Query: 489 -LSTDPEAAKDVVLAEKP 505
STD A VL E P
Sbjct: 589 VASTDVLAT---VLEEMP 603
Score = 102 (41.0 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 27/131 (20%), Positives = 62/131 (47%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ + +++
Sbjct: 127 VNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGE 186
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 187 WTSRIIHLLND 197
Score = 41 (19.5 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 607 DLLGDLIGLDNSAAIV 622
D+LGD+ G +N+++ V
Sbjct: 688 DVLGDIYGSNNNSSAV 703
>UNIPROTKB|E2RJS0 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:AAEX03016123 Ensembl:ENSCAFT00000024322
Uniprot:E2RJS0
Length = 1125
Score = 120 (47.3 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 39/174 (22%), Positives = 87/174 (50%)
Query: 176 WGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV 235
W Q+ +L L D R +E + + + L+ A ++ ++ + + + S
Sbjct: 259 WLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYA-ILFECVHTVYSIYPK 317
Query: 236 RNLCKKMAPPLVT-LLSAEPEIQYVALRNINLIVQRRPTI-LAHEIKVFFC-KYNDPIYV 292
L +K A + +LS + ++Y+ L+ + ++Q+ PT+ L H++ + C + DPI +
Sbjct: 318 SELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDPTLALQHQMTIIECLDHPDPI-I 376
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 346
K E LE++ ++ + +NI ++ + EY + +++ V +G+ A E+ A
Sbjct: 377 KRETLELLYRITNAQNITVIVQKMLEYLHQSKEEYI--IVNLVGKIAELAEKYA 428
Score = 81 (33.6 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D S + + Q NL K++ YL + + +L +L VNT VKD Q N +
Sbjct: 77 LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVE 136
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
+A+ + I ++ + ++ L+ +R+ A + + K + I V+
Sbjct: 137 VCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFHLIAPNQVQ 191
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 28/137 (20%), Positives = 55/137 (40%)
Query: 406 MIWIIGEYAERIDNAD----XXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQM 461
M W++GEY+ +D ++ + L+ A KL P +
Sbjct: 501 MSWVLGEYSYLLDKDTPEEVLTKLYKLLMNDSVSSETKAWLIAAVTKL---TPQAHSSNI 557
Query: 462 IQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSL--L 519
++ ++ T+ D +R A+ + L + E K ++ +K S + +D SL L
Sbjct: 558 VERLIQEFTISLDTC-MRQHAFEL-KHLRENLELMKSLLPVDK---SCEDMVVDASLSFL 612
Query: 520 DELLANIATLSSVYHKP 536
D +A + + +KP
Sbjct: 613 DGFVAEELSQGAAPYKP 629
>UNIPROTKB|Q9UPM8 [details] [associations]
symbol:AP4E1 "AP-4 complex subunit epsilon-1" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
Reactome:REACT_11123 InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 EMBL:CH471082 eggNOG:NOG303101 Orphanet:280763
EMBL:AF155156 EMBL:AB030653 EMBL:CR749604 EMBL:AC021752
EMBL:AC022407 EMBL:AC073964 EMBL:BC126308 EMBL:BC130466
IPI:IPI00010213 RefSeq:NP_001239056.1 RefSeq:NP_031373.2
UniGene:Hs.413366 ProteinModelPortal:Q9UPM8 SMR:Q9UPM8
IntAct:Q9UPM8 STRING:Q9UPM8 PhosphoSite:Q9UPM8 DMDM:145559441
PaxDb:Q9UPM8 PRIDE:Q9UPM8 DNASU:23431 Ensembl:ENST00000261842
Ensembl:ENST00000560508 GeneID:23431 KEGG:hsa:23431 UCSC:uc001zyx.2
CTD:23431 GeneCards:GC15P051200 HGNC:HGNC:573 HPA:HPA041749
HPA:HPA041891 MIM:607244 MIM:613744 neXtProt:NX_Q9UPM8
PharmGKB:PA24865 HOGENOM:HOG000231886 HOVERGEN:HBG050522
InParanoid:Q9UPM8 KO:K12400 OMA:KYAPDNA OrthoDB:EOG4QFWCJ
GenomeRNAi:23431 NextBio:45677 Bgee:Q9UPM8 CleanEx:HS_AP4E1
Genevestigator:Q9UPM8 GermOnline:ENSG00000081014 GO:GO:0030126
InterPro:IPR017109 PANTHER:PTHR22780:SF6 PIRSF:PIRSF037097
Uniprot:Q9UPM8
Length = 1137
Score = 121 (47.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 40/174 (22%), Positives = 87/174 (50%)
Query: 176 WGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV 235
W Q+ +L L D R +E + + + L+ A ++ ++ + + + S
Sbjct: 272 WLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYA-ILFECVHTVYSIYPK 330
Query: 236 RNLCKKMAPPLVT-LLSAEPEIQYVALRNINLIVQRRPTI-LAHEIKVFFC-KYNDPIYV 292
L +K A + +LS + ++Y+ L+ + ++Q+ PT+ L H++ + C + DPI +
Sbjct: 331 SELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDPTLALQHQMTIIECLDHPDPI-I 389
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 346
K E LE++ ++ + +NI ++ + EY + ++V V +G+ A E+ A
Sbjct: 390 KRETLELLYRITNAQNITVIVQKMLEYLHQSKEEYV--IVNLVGKIAELAEKYA 441
Score = 83 (34.3 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPN--P 60
+G D S + + Q NL K++ YL + + +L +L VNT VKD Q N
Sbjct: 90 LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVE 149
Query: 61 LIRALAV--RTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
+ AL V + C + + + D LQ K+ VR+ A + + K + I V+
Sbjct: 150 VCMALTVVSQIFPCEMIPAVLPLIEDKLQHS-KE---IVRRKAVLALYKFHLIAPNQVQ 204
Score = 46 (21.3 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 27/138 (19%), Positives = 57/138 (41%)
Query: 406 MIWIIGEYAERIDNAD----XXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQM 461
M W++GEY+ +D ++ + L+ A KL + +
Sbjct: 514 MSWVLGEYSYLLDKETPEEVIAKLYKLLMNDSVSSETKAWLIAAVTKLTSQAHSSNT--- 570
Query: 462 IQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSL--L 519
++ +++ T+ D +R A+ + L + E K ++ ++ S + +D SL L
Sbjct: 571 VERLIHEFTISLDTC-MRQHAFEL-KHLHENVELMKSLLPVDR---SCEDLVVDASLSFL 625
Query: 520 DELLANIATLSSVYHKPP 537
D +A + + +KPP
Sbjct: 626 DGFVAEGLSQGAAPYKPP 643
>MGI|MGI:1336993 [details] [associations]
symbol:Ap4e1 "adaptor-related protein complex AP-4, epsilon
1" species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
MGI:MGI:1336993 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 GO:GO:0005802
eggNOG:NOG303101 GeneTree:ENSGT00390000012618 CTD:23431
HOGENOM:HOG000231886 HOVERGEN:HBG050522 KO:K12400 OMA:KYAPDNA
OrthoDB:EOG4QFWCJ GO:GO:0030126 InterPro:IPR017109
PANTHER:PTHR22780:SF6 PIRSF:PIRSF037097 EMBL:AK144636 EMBL:AL928836
EMBL:AL928590 EMBL:BC042530 IPI:IPI00667233 RefSeq:NP_780759.2
UniGene:Mm.134045 ProteinModelPortal:Q80V94 SMR:Q80V94
STRING:Q80V94 PhosphoSite:Q80V94 PaxDb:Q80V94 PRIDE:Q80V94
DNASU:108011 Ensembl:ENSMUST00000002063 GeneID:108011
KEGG:mmu:108011 InParanoid:A2ASB4 NextBio:359873 Bgee:Q80V94
CleanEx:MM_AP4E1 Genevestigator:Q80V94
GermOnline:ENSMUSG00000001998 Uniprot:Q80V94
Length = 1122
Score = 117 (46.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 52/246 (21%), Positives = 112/246 (45%)
Query: 176 WGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV 235
W Q+ +L L D R +E + + + L+ A ++ ++ + + I S
Sbjct: 271 WLQIQLLRILGLLGKDDERTSELMYDVLDESLRRAELNHNVTYA-ILFECVHTIYSIYPK 329
Query: 236 RNLCKKMAPPLVT-LLSAEPEIQYVALRNINLIVQRRPTI-LAHEIKVFFC-KYNDPIYV 292
L +K A + +LS + ++Y+ L+ + ++Q+ P++ L H+I + C + DPI +
Sbjct: 330 SELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDPSLALQHQITIIECLDHPDPI-I 388
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
K E LE++ ++ + +N+ ++ + EY + + + + +GR A E+ A +
Sbjct: 389 KRETLELLYRITNAQNVVVIVQKMLEYLHQSKEEHI--IISLVGRIAELAEKYAPDNVWF 446
Query: 353 LLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGE 412
+ + N V V D+ +P+ + + L E D DE E + ++ +
Sbjct: 447 IQTM-----NAVFS----VGGDVM--HPDILSNFLRLLAEGFD--DETEDQQLRLYAVQS 493
Query: 413 YAERID 418
Y +D
Sbjct: 494 YLTLLD 499
Score = 87 (35.7 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D S + + Q NL K++ YL + + +L +L VNT VKD Q N +
Sbjct: 89 LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVE 148
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
+A+ + I ++ + ++ L+ +R+ A + + K Y I V+
Sbjct: 149 VCMALTVVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFYLIAPNQVQ 203
>TAIR|locus:2199897 [details] [associations]
symbol:GAMMA-ADAPTIN 1 "gamma-adaptin 1" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;ISS] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0030276 "clathrin binding" evidence=ISS]
[GO:0030121 "AP-1 adaptor complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0008565 GO:GO:0006897 GO:GO:0030121 SUPFAM:SSF49348
EMBL:AF061286 EMBL:AF124524 EMBL:AJ133777 EMBL:AC002423
EMBL:BT004307 EMBL:BT005557 IPI:IPI00542209 PIR:T51951
RefSeq:NP_173802.1 RefSeq:NP_849701.1 UniGene:At.10731 HSSP:P22892
ProteinModelPortal:Q84K16 SMR:Q84K16 IntAct:Q84K16 STRING:Q84K16
PaxDb:Q84K16 PRIDE:Q84K16 EnsemblPlants:AT1G23900.1
EnsemblPlants:AT1G23900.2 GeneID:839001 KEGG:ath:AT1G23900
TAIR:At1g23900 eggNOG:NOG303101 HOGENOM:HOG000210271
InParanoid:Q84K16 KO:K12391 OMA:VETIMAI PhylomeDB:Q84K16
ProtClustDB:CLSN2682358 Genevestigator:Q84K16 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 Uniprot:Q84K16
Length = 876
Score = 106 (42.4 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 55/239 (23%), Positives = 102/239 (42%)
Query: 191 ADAREA-ENIVERVTPRLQ---HANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPL 246
ADA + +I+ +V + + +A AV+ V+ I+ I T+ +R L +
Sbjct: 265 ADASDLMTDILAQVATKTESNKNAGNAVLYECVETIMA----IEDTNSLRVLAINILGRF 320
Query: 247 VTLLSAEPEIQYVALRNI-NLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLAS 305
++ + + I+YVAL + I + H + + C + ++ LE++ L +
Sbjct: 321 LS--NRDNNIRYVALNMLMKAITFDDQAVQRHRVTILECVKDPDASIRKRALELVTLLVN 378
Query: 306 DRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKL--ERA--AERCISVLLELIKIKV 361
+ N+ Q+ E +Y D DF I K E+ ++ + VL E K
Sbjct: 379 ENNVTQLTKELIDYLEISDEDFKEDLSAKICFIVEKFSPEKLWYIDQMLKVLCEAGKFVK 438
Query: 362 NYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASM-IWIIGEYAERIDN 419
+ V I+VI + + T + L +S+ T E E + +W IGEY + + N
Sbjct: 439 DDVWHALIVVISNASELHGYT----VRALYKSVLTYSEQETLVRVAVWCIGEYGDLLVN 493
Score = 95 (38.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 25/106 (23%), Positives = 53/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL L+ + ++ +L N+ +D N + LA+ +G I ++ L
Sbjct: 85 KRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQYVVGLALCALGNICSAEMARDLAPE 144
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
++R ++ DP +RK AA+C ++ +L E+ F+ + L+ +
Sbjct: 145 VERLIQFRDPNIRKKAALCSTRIIRKVPDLAEN--FVNAAASLLKE 188
>FB|FBgn0030089 [details] [associations]
symbol:AP-1gamma "Adaptor Protein complex 1, gamma subunit"
species:7227 "Drosophila melanogaster" [GO:0030135 "coated vesicle"
evidence=TAS] [GO:0016183 "synaptic vesicle coating" evidence=TAS]
[GO:0008021 "synaptic vesicle" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0006901 "vesicle
coating" evidence=TAS] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IDA] [GO:0055037 "recycling
endosome" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] [GO:0030141 "secretory granule" evidence=IDA]
[GO:0033363 "secretory granule organization" evidence=IMP]
[GO:0048749 "compound eye development" evidence=IMP] [GO:0035976
"AP1 complex" evidence=IMP;IPI] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0008021
EMBL:AE014298 GO:GO:0030141 GO:GO:0055037 GO:GO:0005802
GO:GO:0007269 GO:GO:0030131 SUPFAM:SSF49348 KO:K12391
Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
GeneTree:ENSGT00390000012618 GO:GO:0044431 GO:GO:0016183
GO:GO:0033363 GO:GO:0048749 GO:GO:0035976 UniGene:Dm.5374
GeneID:31842 KEGG:dme:Dmel_CG9113 CTD:31842 FlyBase:FBgn0030089
GenomeRNAi:31842 NextBio:775599 RefSeq:NP_788891.2
ProteinModelPortal:Q7KVR8 SMR:Q7KVR8 STRING:Q7KVR8 PRIDE:Q7KVR8
EnsemblMetazoa:FBtr0071296 UCSC:CG9113-RD InParanoid:Q7KVR8
OMA:LNKVVSM PhylomeDB:Q7KVR8 ArrayExpress:Q7KVR8 Bgee:Q7KVR8
Uniprot:Q7KVR8
Length = 982
Score = 106 (42.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 27/106 (25%), Positives = 51/106 (48%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D + LA+ T+G I ++ L
Sbjct: 123 KRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLALCTLGAIASPEMARDLASE 182
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
++R +K + Y+RK A +C ++ EL+E FL + + L+S+
Sbjct: 183 VERLMKSPNTYIRKKATLCAFRVIRRVPELMEI--FLPATRSLLSE 226
Score = 96 (38.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 47/231 (20%), Positives = 91/231 (39%)
Query: 192 DAREAEN-IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 250
DA EA N I+ +V + + + +L M+ I S +R L + LL
Sbjct: 309 DASEAMNDILAQVATNTETSKNVGNTILYETVLSIMD-IRSEGGLRVLAVNILGRF--LL 365
Query: 251 SAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNI 309
+++ I+YVAL + V + + H + C + + ++ +E+ L + +NI
Sbjct: 366 NSDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPDVSIRRRAMELSFALINAQNI 425
Query: 310 DQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAI 369
+ E + + D +F + + A + + L ++ NYV + +
Sbjct: 426 RTMTKELLLFLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDVV 485
Query: 370 IVIKDIFRRYPNTYESIIAT-LCESLDTLDEPEAKASM----IWIIGEYAE 415
+ P ++ I ESL + E K + +W IGEY +
Sbjct: 486 SSTIQLVSSSPVPEQTYITNRFWESLQVANHCEDKQPLLQVAVWAIGEYGD 536
>UNIPROTKB|A2VE21 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9913 "Bos
taurus" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093
EMBL:BC133529 IPI:IPI00688869 RefSeq:NP_001075917.1
UniGene:Bt.22540 ProteinModelPortal:A2VE21 SMR:A2VE21 STRING:A2VE21
PRIDE:A2VE21 Ensembl:ENSBTAT00000022911 GeneID:536616
KEGG:bta:536616 CTD:26958 InParanoid:A2VE21 OMA:SEEGHES
NextBio:20876980 Uniprot:A2VE21
Length = 871
Score = 149 (57.5 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 84/486 (17%), Positives = 189/486 (38%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + A D+ I+ ++ KD + R
Sbjct: 65 EATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDV-IIVTSSLTKDMTGKEDVYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I + + + +++ + D V +A + + I+ ++V+ R E+
Sbjct: 124 AIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVK-RWVNEAQ 182
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
+ SD + T S L + C + I A
Sbjct: 183 EAASSDNIMVQYHALGVLYHLKKNDRLAVSKMLNKFTKSGLKSQFAYC-----MLIRIAS 237
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPP 245
K + + + + L++ + V+ A I+ L T R L ++
Sbjct: 238 RLLKENEEGHESPVFDFIESCLRNKHEMVIYEAASAIIH---LPNCT--ARELAPAVSVL 292
Query: 246 LVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 304
+ S +P ++Y A+R +N + + P+ + A + + + + + ++K
Sbjct: 293 QLFCSSPKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTG 352
Query: 305 SDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYV 364
S+ ++D+++ + + +E+ +F V+AI K R ++ L +++ +
Sbjct: 353 SESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFE 412
Query: 365 VQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADXX 423
+ AI+ I I P + E+ +A LCE ++ + ++ ++G+ R
Sbjct: 413 YKRAIVDCIIHIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKY 472
Query: 424 XXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAY 483
V+ ++A K + P I V+L ++TD+ ++RDRA
Sbjct: 473 IRFIFNRVVLENEAVRAAAVSALAKFGAQNENLLPS--ILVLLQRCMMDTDD-EVRDRAT 529
Query: 484 IYWRLL 489
Y +L
Sbjct: 530 FYLNVL 535
>ZFIN|ZDB-GENE-000208-8 [details] [associations]
symbol:copg2 "coatomer protein complex, subunit gamma
2" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 ZFIN:ZDB-GENE-000208-8 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958
EMBL:AF191561 EMBL:AF191562 EMBL:CR749763 EMBL:BX004864
EMBL:BC045918 EMBL:BC096860 IPI:IPI00495942 IPI:IPI00898490
RefSeq:NP_571069.1 UniGene:Dr.75573 HSSP:Q9Y678
ProteinModelPortal:Q9PUE4 SMR:Q9PUE4 STRING:Q9PUE4 PRIDE:Q9PUE4
Ensembl:ENSDART00000043660 GeneID:30187 KEGG:dre:30187
InParanoid:Q7ZVC5 NextBio:20806653 Bgee:Q9PUE4 Uniprot:Q9PUE4
Length = 873
Score = 135 (52.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 46/262 (17%), Positives = 114/262 (43%)
Query: 240 KKMAPPL--VTLLSAEPE--IQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKM 294
+++AP + + L + P+ ++Y A+R +N + + P+ + A + + + +
Sbjct: 283 RELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIAT 342
Query: 295 EKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLL 354
+ ++K S+ ++D+++ + + +E+ +F V+AI K R ++ L
Sbjct: 343 LAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMNFLS 402
Query: 355 ELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEY 413
+++ + + AI+ I I P + E+ +A LCE ++ + ++ ++G+
Sbjct: 403 NMLRDDGGFEYKRAIVDCIISIIEENPESKETGLAHLCEFIEDCEHTVLATKILHLLGKE 462
Query: 414 AERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVET 473
R V+ ++A K + P + V++ +++
Sbjct: 463 GPRTPTPSKYIRFIFNRVVLESEAVRAAAVSALAKFGAQNDDLLPS--VLVLMQRCMMDS 520
Query: 474 DNPDLRDRAYIYWRLLSTDPEA 495
D+ ++RDRA Y +L +A
Sbjct: 521 DD-EVRDRATFYMNVLQQKQKA 541
Score = 62 (26.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 19/112 (16%), Positives = 50/112 (44%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + A D+ I+ ++ KD + R
Sbjct: 65 EATEAFFAMTRLFQSNDQTLRRMCYLTIKEMANISEDV-IIVTSSLTKDMTGKEDVYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
A+R + I + + + +++ + D P V +A + + ++ ++V+
Sbjct: 124 AIRALCRITDTTMLQAIERYMKQAIVDKVPSVSSSALVSSLHMVKMSFDVVK 175
>UNIPROTKB|I3LM40 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:CU407241 EMBL:CU915459
Ensembl:ENSSSCT00000025088 Uniprot:I3LM40
Length = 1131
Score = 121 (47.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 39/174 (22%), Positives = 87/174 (50%)
Query: 176 WGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV 235
W Q+ +L L D R +E + + + L+ A ++ ++ + + + S
Sbjct: 272 WLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYA-ILFECVHTVYSIYPK 330
Query: 236 RNLCKKMAPPLVT-LLSAEPEIQYVALRNINLIVQRRPTI-LAHEIKVFFC-KYNDPIYV 292
L +K A + +LS + ++Y+ L+ + ++Q+ PT+ L H++ + C + DPI +
Sbjct: 331 SELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDPTLALQHQMTIIECLDHPDPI-I 389
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 346
K E LE++ ++ + +NI ++ + EY + +++ V +G+ A E+ A
Sbjct: 390 KRETLELLYRITNAQNITVIVQKMLEYLQQSKEEYI--IVNLVGKIAELAEKYA 441
Score = 81 (33.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D S + + Q NL K++ YL + + +L +L VNT VKD Q N +
Sbjct: 90 LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVVKDLQSTNLVE 149
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
+A+ + I ++ + ++ L+ +R+ A + + K + I V+
Sbjct: 150 VCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFHLIAPNQVQ 204
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 406 MIWIIGEYAERID 418
M W++GEY+ +D
Sbjct: 514 MSWVLGEYSYLLD 526
>UNIPROTKB|F1RYM9 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:CU407241 EMBL:CU915459
Ensembl:ENSSSCT00000005118 Uniprot:F1RYM9
Length = 1139
Score = 121 (47.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 39/174 (22%), Positives = 87/174 (50%)
Query: 176 WGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV 235
W Q+ +L L D R +E + + + L+ A ++ ++ + + + S
Sbjct: 272 WLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYA-ILFECVHTVYSIYPK 330
Query: 236 RNLCKKMAPPLVT-LLSAEPEIQYVALRNINLIVQRRPTI-LAHEIKVFFC-KYNDPIYV 292
L +K A + +LS + ++Y+ L+ + ++Q+ PT+ L H++ + C + DPI +
Sbjct: 331 SELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDPTLALQHQMTIIECLDHPDPI-I 389
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 346
K E LE++ ++ + +NI ++ + EY + +++ V +G+ A E+ A
Sbjct: 390 KRETLELLYRITNAQNITVIVQKMLEYLQQSKEEYI--IVNLVGKIAELAEKYA 441
Score = 81 (33.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D S + + Q NL K++ YL + + +L +L VNT VKD Q N +
Sbjct: 90 LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVVKDLQSTNLVE 149
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
+A+ + I ++ + ++ L+ +R+ A + + K + I V+
Sbjct: 150 VCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFHLIAPNQVQ 204
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 406 MIWIIGEYAERID 418
M W++GEY+ +D
Sbjct: 514 MSWVLGEYSYLLD 526
>UNIPROTKB|F1PHS7 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 GeneTree:ENSGT00390000016313
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:SEEGHES EMBL:AAEX03009252 EMBL:AAEX03009250
EMBL:AAEX03009251 Ensembl:ENSCAFT00000002234 Uniprot:F1PHS7
Length = 1010
Score = 148 (57.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 84/486 (17%), Positives = 188/486 (38%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + A D+ I+ ++ KD + R
Sbjct: 186 EATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDV-IIVTSSLTKDMTGKEDVYRGP 244
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I + + + +++ + D V +A + + I+ ++V+ R E+
Sbjct: 245 AIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISHDVVK-RWVNEAQ 303
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
+ SD + T S L + C + I A
Sbjct: 304 EAASSDNIMVQYHALGVLYHLKKNDRLAVSKMLNKFTKSSLKSQFAYC-----MLIRIAS 358
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPP 245
K + + + + L++ + V+ A I+ L T R L ++
Sbjct: 359 RLLKENEEGHESPLFDFIESCLRNKHEMVIYEAASAIIH---LPNCT--ARELAPAVSVL 413
Query: 246 LVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 304
+ S +P ++Y A+R +N + + P+ + A + + + + + ++K
Sbjct: 414 QLFCSSPKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTG 473
Query: 305 SDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYV 364
S+ ++D+++ + + +E+ +F V+AI K R ++ L +++ +
Sbjct: 474 SESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFE 533
Query: 365 VQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADXX 423
+ AI+ I I P E+ +A LCE ++ + ++ ++G+ R
Sbjct: 534 YKRAIVDCIISIVEENPEGKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKY 593
Query: 424 XXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAY 483
V+ ++A K + P I V+L ++TD+ ++RDRA
Sbjct: 594 IRFIFNRVVLENEAVRAAAVSALAKFGAQNENLLPS--ILVLLQRCMMDTDD-EVRDRAT 650
Query: 484 IYWRLL 489
Y +L
Sbjct: 651 FYLNVL 656
>UNIPROTKB|P53620 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9913 "Bos
taurus" [GO:0006890 "retrograde vesicle-mediated transport, Golgi
to ER" evidence=TAS] [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0030126 "COPI vesicle coat"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
GO:GO:0006891 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 PDB:3TJZ PDBsum:3TJZ EMBL:X92987
EMBL:BC111322 EMBL:X70019 IPI:IPI00717350 PIR:S33957
RefSeq:NP_001032904.1 UniGene:Bt.65158 PDB:1PZD PDBsum:1PZD
ProteinModelPortal:P53620 SMR:P53620 DIP:DIP-739N STRING:P53620
Ensembl:ENSBTAT00000017588 GeneID:338055 KEGG:bta:338055 CTD:22820
eggNOG:COG5240 GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 InParanoid:P53620 OrthoDB:EOG4DZ1TM
EvolutionaryTrace:P53620 NextBio:20812506 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093
Uniprot:P53620
Length = 874
Score = 147 (56.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 55/281 (19%), Positives = 124/281 (44%)
Query: 225 QMELITSTDVVRNL--C--KKMAPPL--VTLLSAEPE--IQYVALRNINLIVQRRPT-IL 275
+M + + + NL C K++AP + + L + P+ ++Y A+R +N + + P+ +
Sbjct: 264 EMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVT 323
Query: 276 AHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAI 335
A + + + + + ++K S+ +ID+++ + + +E+ +F V+AI
Sbjct: 324 ACNLDLENLVTDANRSIATLAITTLLKTGSEGSIDRLMKQISSFMSEISDEFKVVVVQAI 383
Query: 336 GRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESL 394
K R ++ L +++ + + + AI+ I I + E+ ++ LCE +
Sbjct: 384 SALCQKYPRKHAVLMNFLFSMLREEGGFEYKRAIVDCIISIIEENAESKETGLSHLCEFI 443
Query: 395 DTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKP 454
+ + ++ ++G+ R N A+V+ ++A K +
Sbjct: 444 EDCEFTVLATRILHLLGQEGPRTSNPSKYIRFIYNRVVLEHAEVRAGAVSALAKFGAQNE 503
Query: 455 TEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 495
P I V+L ++ DN ++RDRA Y +L +A
Sbjct: 504 EMLPS--ILVLLKRCVMDDDN-EVRDRATFYLNVLEQKQKA 541
Score = 53 (23.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 20/112 (17%), Positives = 48/112 (42%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + + D+ I+ ++ KD R
Sbjct: 65 EATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV-IIVTSSLTKDMTGKEDSYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
AVR + I + + + +++ + D P V +A + L + ++V+
Sbjct: 124 AVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK 175
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 513 QLDPSLLDELLANIATLSSVYHKP 536
Q++PS E+L + S Y++P
Sbjct: 680 QMEPSEAYEVLCYVPARSLPYNQP 703
>FB|FBgn0028968 [details] [associations]
symbol:gammaCop "gamma-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] [GO:0007424 "open tracheal
system development" evidence=IMP] [GO:0035149 "lumen formation,
open tracheal system" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0008362 "chitin-based embryonic cuticle biosynthetic process"
evidence=IMP] [GO:0010883 "regulation of lipid storage"
evidence=IDA] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0035158 "regulation of tube diameter, open
tracheal system" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0007436 "larval salivary gland morphogenesis"
evidence=IMP] [GO:0005801 "cis-Golgi network" evidence=IDA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0005783
EMBL:AE014297 GO:GO:0005794 GO:GO:0006886 GO:GO:0006911
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0008362 HOGENOM:HOG000250272
GO:GO:0030198 GO:GO:0009306 GO:GO:0000910 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 GO:GO:0010883
GO:GO:0035147 GO:GO:0005801 GO:GO:0035158 GO:GO:0007436
eggNOG:COG5240 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE
HSSP:P53620 EMBL:AF191563 EMBL:AY113545 EMBL:BT001628
RefSeq:NP_001163784.1 RefSeq:NP_524608.1 RefSeq:NP_733432.1
UniGene:Dm.1895 ProteinModelPortal:Q8I0G5 SMR:Q8I0G5
MINT:MINT-1018880 STRING:Q8I0G5 PaxDb:Q8I0G5 PRIDE:Q8I0G5
EnsemblMetazoa:FBtr0085794 GeneID:43717 KEGG:dme:Dmel_CG1528
UCSC:CG1528-RB CTD:43717 FlyBase:FBgn0028968 InParanoid:Q8MYW4
PhylomeDB:Q8I0G5 GenomeRNAi:43717 NextBio:835406 Bgee:Q8I0G5
GO:GO:0035149 Uniprot:Q8I0G5
Length = 883
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 56/320 (17%), Positives = 133/320 (41%)
Query: 235 VRNLCKKMAPPLVTLLS---AEPE--IQYVALRNINLIVQRRPTILAH---EIKVFFCKY 286
++N +M P ++L + P+ +++ A+R +N + P + +++
Sbjct: 286 LKNTNPRMLSPAFSILQLFCSSPKATLRFAAVRTLNKVAMTHPAAVTTCNLDLEGLITDS 345
Query: 287 NDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 346
N + + ++K ++ ++++++ + + E+ +F V+AI K R
Sbjct: 346 NRSVATLA--ITTLLKTGAESSVERLMKQISTFVAEISDEFKVVVVQAICALCTKYPRKH 403
Query: 347 ERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
++ L +++ + + +I+ I I + ES ++ LCE ++ +
Sbjct: 404 TVLMNFLSGMLREEGGLEYKTSIVDTIITIIEENADAKESGLSHLCEFIEDCEHVSLAVR 463
Query: 406 MIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQMIQVV 465
++ ++G+ V+ +TA + P I V+
Sbjct: 464 ILHLLGKEGPFAATPSKYIRFIYNRVILESPIVRAAAVTAMAQFGASCPAL--LSNILVL 521
Query: 466 LNNATVETDNPDLRDRAYIYWRLLSTD-PEAAKDVVLAEKPVISDDSNQLDPSLLDELLA 524
L ++ D+ ++RDRA Y +L+++ PE K+ ++ E+ S L+ SL++ L
Sbjct: 522 LGRCQMDPDD-EVRDRATYYLSILNSERPELYKNYII-ERENCS--LALLEKSLVEHLNG 577
Query: 525 NIATLSSVYHKPPEAFVTRV 544
++ T + P A V V
Sbjct: 578 DVDTRFDISIVPKAAIVKPV 597
Score = 90 (36.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 28/129 (21%), Positives = 64/129 (49%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
V ++ + F + Q++++ L+++VYL + + D+ I+ ++ KD L
Sbjct: 67 VAREATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDV-IIVTSSLTKDMTGKEDLY 125
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
RA A+R + I + + + + +++C+ D + V A + +L + ++V+ R
Sbjct: 126 RAAAIRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVK-RWAN 184
Query: 123 ESLKDLISD 131
E+ + L SD
Sbjct: 185 EAQEALNSD 193
>ZFIN|ZDB-GENE-050208-437 [details] [associations]
symbol:ap3d1 "adaptor-related protein complex 3,
delta 1 subunit" species:7955 "Danio rerio" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
Pfam:PF01602 ZFIN:ZDB-GENE-050208-437 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
eggNOG:COG5096 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL OrthoDB:EOG45TCMD
InterPro:IPR010474 Pfam:PF06375 HOVERGEN:HBG050520 EMBL:BX005201
EMBL:BC171356 IPI:IPI00864428 RefSeq:NP_001038480.1
UniGene:Dr.74054 Ensembl:ENSDART00000105580 GeneID:563359
KEGG:dre:563359 Uniprot:B7ZUU8
Length = 1247
Score = 148 (57.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 74/437 (16%), Positives = 175/437 (40%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G DVS ++V M + K++ YL D+ +L N KD PN
Sbjct: 68 LGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPNQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--SAVKMILQQMELITSTDVVRNLCK 240
+ R + ++E +T L H+ A+ L V ++ + ++S +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
++ + +L ++ ++Y+ L ++ I++ P ++ +H+ + C + +++ L
Sbjct: 302 QLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRAL 361
Query: 298 EIMIKLASDRNIDQVLLEF-----KEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
+++ + S +N+ +++ + K T + + K + + + E IS+
Sbjct: 362 DLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYISI 421
Query: 353 LLELIKI---KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP-------EA 402
L+EL ++ + +++ ++ + + + +ATL ++ L E
Sbjct: 422 LVELTRLEGTRHGHLIASQMLDVAIRVKAIRAFAVAQMATLLDNAHLLTGNTQRNGICEV 481
Query: 403 KASMIWIIGEYAERIDN 419
+ WI GE+AE +++
Sbjct: 482 LYAAAWICGEFAEHLED 498
>UNIPROTKB|E1BNA3 [details] [associations]
symbol:LOC536144 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618 KO:K12400
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:DAAA02029063 IPI:IPI00923849
RefSeq:XP_003586629.1 Ensembl:ENSBTAT00000061383 GeneID:536144
KEGG:bta:536144 Uniprot:E1BNA3
Length = 1138
Score = 115 (45.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 39/174 (22%), Positives = 86/174 (49%)
Query: 176 WGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV 235
W Q+ +L L D R +E + + + L+ A ++ ++ + + + S
Sbjct: 272 WLQIQLLRILGLLGKDDQRTSELMYDVLDESLRTAELNHNVTYA-ILFECVHTVYSIYPK 330
Query: 236 RNLCKKMAPPLVT-LLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFC-KYNDPIYV 292
L +K A + +LS + ++Y+ L+ + ++Q+ PT L H++ + C + DPI +
Sbjct: 331 SELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDPTQALQHQMTIIECLDHPDPI-I 389
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 346
K E LE++ ++ + +NI ++ + EY + +++ V +G+ A E+ A
Sbjct: 390 KRETLELLYRITNAQNITVIVQKMLEYLHQSKEEYI--IVNLVGKIAELAEKYA 441
Score = 86 (35.3 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D S + + Q NL K++ YL + + +L +L VNT VKD Q N +
Sbjct: 90 LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVE 149
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
+A+ + I ++ + ++ L+ +R+ A + + K Y I V+
Sbjct: 150 VCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFYLIAPNQVQ 204
Score = 41 (19.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 27/137 (19%), Positives = 54/137 (39%)
Query: 406 MIWIIGEYAERIDNAD----XXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKPTEGPQQM 461
M W++GEY+ ++ ++ + ++ A KL P +
Sbjct: 514 MSWVLGEYSYLLNKETPEEVITKLYKLLMNDSISSETKAWIIAAVTKL---TPQAHSSNI 570
Query: 462 IQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSL--L 519
++ ++ T D LR A+ + L + + K ++ +K S + +D SL L
Sbjct: 571 VERLIQEFTTSLDTC-LRQHAFEL-KHLHENIKLMKSLLPLDK---SCEDMVVDASLSFL 625
Query: 520 DELLANIATLSSVYHKP 536
D +A T + +KP
Sbjct: 626 DGFVAEELTQGAAPYKP 642
>UNIPROTKB|E2RPG9 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 CTD:22820 GeneTree:ENSGT00390000016313
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:AAEX03012021 RefSeq:XP_533723.2
Ensembl:ENSCAFT00000006920 GeneID:476517 KEGG:cfa:476517
Uniprot:E2RPG9
Length = 874
Score = 142 (55.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 53/281 (18%), Positives = 124/281 (44%)
Query: 225 QMELITSTDVVRNL--C--KKMAPPL--VTLLSAEPE--IQYVALRNINLIVQRRPT-IL 275
+M + + + NL C K++AP + + L + P+ ++Y A+R +N + + P+ +
Sbjct: 264 EMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVT 323
Query: 276 AHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAI 335
A + + + + + ++K S+ +ID+++ + + +E+ +F V+AI
Sbjct: 324 ACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAI 383
Query: 336 GRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESL 394
K R ++ L +++ + + + AI+ I I + E+ ++ LCE +
Sbjct: 384 SALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENTESKETGLSHLCEFI 443
Query: 395 DTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKP 454
+ + ++ ++G+ + +N +V+ ++A K +
Sbjct: 444 EDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNE 503
Query: 455 TEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 495
P I V+L ++ DN ++RDRA Y +L +A
Sbjct: 504 EMLPS--ILVLLKRCVMDDDN-EVRDRATFYLNVLEQKQKA 541
Score = 52 (23.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 20/112 (17%), Positives = 48/112 (42%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + + D+ I+ ++ KD R
Sbjct: 65 EATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV-IIVTSSLTKDMTGKEDNYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
AVR + I + + + +++ + D P V +A + L + ++V+
Sbjct: 124 AVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK 175
>MGI|MGI:1858696 [details] [associations]
symbol:Copg1 "coatomer protein complex, subunit gamma 1"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005798 "Golgi-associated
vesicle" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0051683 "establishment of Golgi localization"
evidence=ISO] [GO:0072384 "organelle transport along microtubule"
evidence=ISO] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
MGI:MGI:1858696 GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 eggNOG:COG5240 GeneTree:ENSGT00390000016313
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:WDEVGEE ChiTaRS:COPG1 EMBL:AF187079
EMBL:AK049417 EMBL:AK077461 EMBL:AK147895 EMBL:AK151284
EMBL:AK151816 EMBL:AK153142 EMBL:AK164280 EMBL:AK169256
EMBL:AK171950 EMBL:AK172519 EMBL:BC008553 EMBL:BC024686
EMBL:BC024896 IPI:IPI00223437 RefSeq:NP_059505.1 UniGene:Mm.258785
HSSP:P53620 ProteinModelPortal:Q9QZE5 SMR:Q9QZE5 STRING:Q9QZE5
PhosphoSite:Q9QZE5 PaxDb:Q9QZE5 PRIDE:Q9QZE5
Ensembl:ENSMUST00000113607 GeneID:54161 KEGG:mmu:54161
UCSC:uc009cug.1 CTD:54161 InParanoid:Q922C6 NextBio:311004
Bgee:Q9QZE5 CleanEx:MM_COPG Genevestigator:Q9QZE5 Uniprot:Q9QZE5
Length = 874
Score = 142 (55.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 53/281 (18%), Positives = 124/281 (44%)
Query: 225 QMELITSTDVVRNL--C--KKMAPPL--VTLLSAEPE--IQYVALRNINLIVQRRPT-IL 275
+M + + + NL C K++AP + + L + P+ ++Y A+R +N + + P+ +
Sbjct: 264 EMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVT 323
Query: 276 AHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAI 335
A + + + + + ++K S+ +ID+++ + + +E+ +F V+AI
Sbjct: 324 ACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAI 383
Query: 336 GRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESL 394
K R ++ L +++ + + + AI+ I I + E+ ++ LCE +
Sbjct: 384 SALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFI 443
Query: 395 DTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKP 454
+ + ++ ++G+ + +N +V+ ++A K +
Sbjct: 444 EDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNE 503
Query: 455 TEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 495
P I V+L ++ DN ++RDRA Y +L +A
Sbjct: 504 EMLPS--ILVLLKRCVMDDDN-EVRDRATFYLNVLEQKQKA 541
Score = 51 (23.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 20/112 (17%), Positives = 48/112 (42%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + + D+ I+ ++ KD R
Sbjct: 65 EATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV-IIVTSSLTKDMTGKEDNYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
AVR + I + + + +++ + D P V +A + L + ++V+
Sbjct: 124 AVRALCQITDSTMLQAVERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK 175
>RGD|1565292 [details] [associations]
symbol:Copg1 "coatomer protein complex, subunit gamma 1"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0051683 "establishment of Golgi localization" evidence=IMP]
[GO:0072384 "organelle transport along microtubule" evidence=IMP]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 RGD:1565292
GO:GO:0005634 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 EMBL:AB158425 EMBL:AB158426
EMBL:BC129074 IPI:IPI00364504 RefSeq:NP_001026992.1
UniGene:Rn.50150 ProteinModelPortal:Q4AEF8 SMR:Q4AEF8 IntAct:Q4AEF8
STRING:Q4AEF8 PRIDE:Q4AEF8 Ensembl:ENSRNOT00000016137 GeneID:297428
KEGG:rno:297428 InParanoid:Q4AEF8 NextBio:642245
ArrayExpress:Q4AEF8 Genevestigator:Q4AEF8 Uniprot:Q4AEF8
Length = 874
Score = 142 (55.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 53/281 (18%), Positives = 124/281 (44%)
Query: 225 QMELITSTDVVRNL--C--KKMAPPL--VTLLSAEPE--IQYVALRNINLIVQRRPT-IL 275
+M + + + NL C K++AP + + L + P+ ++Y A+R +N + + P+ +
Sbjct: 264 EMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVT 323
Query: 276 AHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAI 335
A + + + + + ++K S+ +ID+++ + + +E+ +F V+AI
Sbjct: 324 ACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAI 383
Query: 336 GRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESL 394
K R ++ L +++ + + + AI+ I I + E+ ++ LCE +
Sbjct: 384 SALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFI 443
Query: 395 DTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKP 454
+ + ++ ++G+ + +N +V+ ++A K +
Sbjct: 444 EDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNE 503
Query: 455 TEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 495
P I V+L ++ DN ++RDRA Y +L +A
Sbjct: 504 EMLPS--ILVLLKRCVMDDDN-EVRDRATFYLNVLEQKQKA 541
Score = 51 (23.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 20/112 (17%), Positives = 48/112 (42%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + + D+ I+ ++ KD R
Sbjct: 65 EATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV-IIVTSSLTKDMTGKEDNYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
AVR + I + + + +++ + D P V +A + L + ++V+
Sbjct: 124 AVRALCQITDSTMLQAVERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK 175
>UNIPROTKB|Q4AEF8 [details] [associations]
symbol:Copg1 "Coatomer subunit gamma-1" species:10116
"Rattus norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 RGD:1565292
GO:GO:0005634 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 EMBL:AB158425 EMBL:AB158426
EMBL:BC129074 IPI:IPI00364504 RefSeq:NP_001026992.1
UniGene:Rn.50150 ProteinModelPortal:Q4AEF8 SMR:Q4AEF8 IntAct:Q4AEF8
STRING:Q4AEF8 PRIDE:Q4AEF8 Ensembl:ENSRNOT00000016137 GeneID:297428
KEGG:rno:297428 InParanoid:Q4AEF8 NextBio:642245
ArrayExpress:Q4AEF8 Genevestigator:Q4AEF8 Uniprot:Q4AEF8
Length = 874
Score = 142 (55.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 53/281 (18%), Positives = 124/281 (44%)
Query: 225 QMELITSTDVVRNL--C--KKMAPPL--VTLLSAEPE--IQYVALRNINLIVQRRPT-IL 275
+M + + + NL C K++AP + + L + P+ ++Y A+R +N + + P+ +
Sbjct: 264 EMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVT 323
Query: 276 AHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAI 335
A + + + + + ++K S+ +ID+++ + + +E+ +F V+AI
Sbjct: 324 ACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAI 383
Query: 336 GRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESL 394
K R ++ L +++ + + + AI+ I I + E+ ++ LCE +
Sbjct: 384 SALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFI 443
Query: 395 DTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKP 454
+ + ++ ++G+ + +N +V+ ++A K +
Sbjct: 444 EDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNE 503
Query: 455 TEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 495
P I V+L ++ DN ++RDRA Y +L +A
Sbjct: 504 EMLPS--ILVLLKRCVMDDDN-EVRDRATFYLNVLEQKQKA 541
Score = 51 (23.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 20/112 (17%), Positives = 48/112 (42%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + + D+ I+ ++ KD R
Sbjct: 65 EATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV-IIVTSSLTKDMTGKEDNYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
AVR + I + + + +++ + D P V +A + L + ++V+
Sbjct: 124 AVRALCQITDSTMLQAVERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK 175
>UNIPROTKB|E2QXV5 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
GeneTree:ENSGT00550000075067 OMA:VCKLTYL InterPro:IPR010474
Pfam:PF06375 EMBL:AAEX03012612 Ensembl:ENSCAFT00000030886
Uniprot:E2QXV5
Length = 1216
Score = 146 (56.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 61/368 (16%), Positives = 149/368 (40%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M K++ YL D+ +L N KD P+
Sbjct: 68 LGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--SAVKMILQQMELITSTDVVRNLCK 240
+ R + ++E +T L H+ A+ L V ++ + ++S +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
++ + +L ++ ++Y+ L ++ I++ P ++ AH+ V C + +++ L
Sbjct: 302 QLCVQKLRILIEDSDQNLKYLGLLAMSKILRTHPKSVQAHKDLVLQCLDDKDESIRLRAL 361
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVDV-----DFVRKAVRAIGRCAIKLERAAERCISV 352
+++ + S +N+ +++ + + + + + + K + +C + + ISV
Sbjct: 362 DLLYGMVSKKNLVEIVKKLMSHVDKAEGTTYRDELLTKIIDICSQCNYQHITNFQWYISV 421
Query: 353 LLELIKIK 360
L+EL +++
Sbjct: 422 LVELTRLE 429
>UNIPROTKB|Q9Y678 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0051683 "establishment of Golgi
localization" evidence=ISS] [GO:0072384 "organelle transport along
microtubule" evidence=ISS] [GO:0000139 "Golgi membrane"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0005829 GO:GO:0005634 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 EMBL:CH471052 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AB047846 EMBL:AF100756 EMBL:AK001724
EMBL:AK291693 EMBL:BC066650 IPI:IPI00783982 RefSeq:NP_057212.1
UniGene:Hs.518250 PDB:1R4X PDBsum:1R4X ProteinModelPortal:Q9Y678
SMR:Q9Y678 DIP:DIP-29872N IntAct:Q9Y678 MINT:MINT-4657598
STRING:Q9Y678 PhosphoSite:Q9Y678 DMDM:12229771 PaxDb:Q9Y678
PeptideAtlas:Q9Y678 PRIDE:Q9Y678 Ensembl:ENST00000314797
GeneID:22820 KEGG:hsa:22820 UCSC:uc003els.3 GeneCards:GC03P128969
HGNC:HGNC:2236 HPA:HPA037867 neXtProt:NX_Q9Y678 PharmGKB:PA26752
InParanoid:Q9Y678 OMA:WDEVGEE ChiTaRS:COPG1
EvolutionaryTrace:Q9Y678 GenomeRNAi:22820 NextBio:43212
ArrayExpress:Q9Y678 Bgee:Q9Y678 CleanEx:HS_COPG
Genevestigator:Q9Y678 GermOnline:ENSG00000181789 Uniprot:Q9Y678
Length = 874
Score = 140 (54.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 53/281 (18%), Positives = 123/281 (43%)
Query: 225 QMELITSTDVVRNL--C--KKMAPPL--VTLLSAEPE--IQYVALRNINLIVQRRPT-IL 275
+M + + + NL C K++AP + + L + P+ ++Y A+R +N + + P+ +
Sbjct: 264 EMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVT 323
Query: 276 AHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAI 335
A + + + + + ++K S+ +ID+++ + + +E+ +F V+AI
Sbjct: 324 ACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAI 383
Query: 336 GRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESL 394
K R ++ L +++ + + + AI+ I I + E+ ++ LCE +
Sbjct: 384 SALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFI 443
Query: 395 DTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKP 454
+ + ++ ++G+ + N +V+ ++A K +
Sbjct: 444 EDCEFTVLATRILHLLGQEGPKTTNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNE 503
Query: 455 TEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 495
P I V+L ++ DN ++RDRA Y +L +A
Sbjct: 504 EMLPS--ILVLLKRCVMDDDN-EVRDRATFYLNVLEQKQKA 541
Score = 52 (23.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 20/112 (17%), Positives = 48/112 (42%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + + D+ I+ ++ KD R
Sbjct: 65 EATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV-IIVTSSLTKDMTGKEDNYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
AVR + I + + + +++ + D P V +A + L + ++V+
Sbjct: 124 AVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK 175
>UNIPROTKB|F1NB52 [details] [associations]
symbol:COPG "Coatomer subunit gamma" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:AADN02014051
EMBL:AADN02014052 IPI:IPI00571269 PRIDE:F1NB52
Ensembl:ENSGALT00000009434 Uniprot:F1NB52
Length = 874
Score = 142 (55.0 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 53/281 (18%), Positives = 124/281 (44%)
Query: 225 QMELITSTDVVRNL--C--KKMAPPL--VTLLSAEPE--IQYVALRNINLIVQRRPT-IL 275
+M + + + NL C K++AP + + L + P+ ++Y A+R +N + + P+ +
Sbjct: 264 EMVVYEAASAIVNLPNCTAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVT 323
Query: 276 AHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAI 335
A + + + + + ++K S+ +ID+++ + + +E+ +F V+AI
Sbjct: 324 ACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAI 383
Query: 336 GRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESL 394
K R ++ L +++ + + + AI+ I I + E+ ++ LCE +
Sbjct: 384 NALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFI 443
Query: 395 DTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKLFLKKP 454
+ + ++ ++G+ + +N +V+ ++A K +
Sbjct: 444 EDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNE 503
Query: 455 TEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 495
P I V+L ++ DN ++RDRA Y +L +A
Sbjct: 504 EMLPS--ILVLLKRCVMDDDN-EVRDRATFYLNVLEQKQKA 541
Score = 55 (24.4 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 20/112 (17%), Positives = 49/112 (43%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + + D+ I+ ++ KD + R
Sbjct: 65 EATESFFAMTKLFQSNDPTLRRMCYLTIKEMSSIAEDV-IIVTSSLTKDMTGKDDNYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
AVR + I + + + +++ + D P V +A + L + ++V+
Sbjct: 124 AVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKTSFDVVK 175
Score = 37 (18.1 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 506 VISDDSNQLDPSLLDELLANIATLSSVYHKP 536
++ + + Q++P+ E++ I S VY++P
Sbjct: 673 ILENVTVQMEPTEGYEVIGYIPAKSLVYNQP 703
>UNIPROTKB|D4A101 [details] [associations]
symbol:Ap2a2 "AP-2 complex subunit alpha-2" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
RGD:71015 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0030131
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 EMBL:AC109542 IPI:IPI00952004
Ensembl:ENSRNOT00000026738 ArrayExpress:D4A101 Uniprot:D4A101
Length = 929
Score = 102 (41.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 59 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 118
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 119 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 178
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 179 WTSRVVHLLND 189
Score = 92 (37.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 62/316 (19%), Positives = 126/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 289 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 342
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 343 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSY 402
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 403 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 462
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 463 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLH 517
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL
Sbjct: 518 SKFHLCSVPTRALLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRLS 577
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 578 TVASTDILATVLEEMP 593
>UNIPROTKB|O94973 [details] [associations]
symbol:AP2A2 "AP-2 complex subunit alpha-2" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0030122 "AP-2 adaptor complex"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030666 "endocytic vesicle membrane" evidence=TAS] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050690 "regulation of defense
response to virus by virus" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13685 InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0005829
Reactome:REACT_111045 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0007411 GO:GO:0007173 GO:GO:0048011
GO:GO:0006886 GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0019886 GO:GO:0008565
GO:GO:0007268 GO:GO:0006897 GO:GO:0008289 GO:GO:0030122
eggNOG:COG5096 SUPFAM:SSF55711 SUPFAM:SSF49348 HOGENOM:HOG000170596
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
HOVERGEN:HBG050518 GO:GO:0042059 CTD:161 EMBL:AB020706
EMBL:AK223558 EMBL:AK027891 EMBL:BC006155 EMBL:AF049527
IPI:IPI00016621 IPI:IPI00914938 IPI:IPI00914952
RefSeq:NP_001229766.1 RefSeq:NP_036437.1 UniGene:Hs.19121
ProteinModelPortal:O94973 SMR:O94973 IntAct:O94973
MINT:MINT-1198502 STRING:O94973 PhosphoSite:O94973 PaxDb:O94973
PRIDE:O94973 DNASU:161 Ensembl:ENST00000332231
Ensembl:ENST00000448903 Ensembl:ENST00000528815 GeneID:161
KEGG:hsa:161 UCSC:uc001lss.3 UCSC:uc001lst.2 GeneCards:GC11P000915
HGNC:HGNC:562 HPA:CAB017514 MIM:607242 neXtProt:NX_O94973
PharmGKB:PA24853 InParanoid:O94973 ChiTaRS:AP2A2 GenomeRNAi:161
NextBio:643 PMAP-CutDB:O94973 ArrayExpress:O94973 Bgee:O94973
CleanEx:HS_AP2A2 Genevestigator:O94973 GermOnline:ENSG00000183020
Uniprot:O94973
Length = 939
Score = 104 (41.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 128 MGLALHCIASVGSREMAEAFAGEIPKVLVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTSRVVHLLND 198
Score = 90 (36.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 62/316 (19%), Positives = 125/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 298 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 351
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 352 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAPQIVAEMLSY 411
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 412 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 471
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 472 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFHLLH 526
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ + + +L+ RA Y RL
Sbjct: 527 SKFHLCSVPTRALLLSTYIKFVNLFPEVKPTIQDVLRSDSQLRNADVELQQRAVEYLRLS 586
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 587 TVASTDILATVLEEMP 602
>MGI|MGI:101920 [details] [associations]
symbol:Ap2a2 "adaptor-related protein complex 2, alpha 2
subunit" species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=TAS] [GO:0030117 "membrane
coat" evidence=IDA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030141 "secretory granule" evidence=TAS]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
MGI:MGI:101920 GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 GO:GO:0030141 GO:GO:0006897 GO:GO:0005905
GO:GO:0008289 PDB:1KY7 PDBsum:1KY7 PDB:2VJ0 PDBsum:2VJ0
eggNOG:COG5096 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
HOVERGEN:HBG050518 GeneTree:ENSGT00550000074757 OrthoDB:EOG4HMJ8J
CTD:161 ChiTaRS:AP2A2 EMBL:X14972 EMBL:AK088500 EMBL:AC158224
EMBL:AC102524 EMBL:BC010597 EMBL:AF006990 IPI:IPI00310131
PIR:B30111 PIR:S12471 RefSeq:NP_031485.3 UniGene:Mm.253090 PDB:1B9K
PDB:1KY6 PDB:1KYD PDB:1KYF PDB:1KYU PDB:1QTP PDB:1QTS PDB:1W80
PDB:2JKR PDB:2JKT PDB:3HS8 PDBsum:1B9K PDBsum:1KY6 PDBsum:1KYD
PDBsum:1KYF PDBsum:1KYU PDBsum:1QTP PDBsum:1QTS PDBsum:1W80
PDBsum:2JKR PDBsum:2JKT PDBsum:3HS8 ProteinModelPortal:P17427
SMR:P17427 DIP:DIP-32160N IntAct:P17427 MINT:MINT-101068
STRING:P17427 PhosphoSite:P17427 PaxDb:P17427 PRIDE:P17427
Ensembl:ENSMUST00000003038 GeneID:11772 KEGG:mmu:11772
InParanoid:Q8C2J5 EvolutionaryTrace:P17427 NextBio:279555
PMAP-CutDB:P17427 Bgee:P17427 CleanEx:MM_AP2A2
Genevestigator:P17427 GermOnline:ENSMUSG00000002957 Uniprot:P17427
Length = 938
Score = 102 (41.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 128 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTSRVVHLLND 198
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 62/316 (19%), Positives = 126/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 298 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 351
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 352 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSY 411
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 412 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 471
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 472 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLH 526
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL
Sbjct: 527 SKFHLCSVPTRALLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRLS 586
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 587 TVASTDILATVLEEMP 602
>RGD|71015 [details] [associations]
symbol:Ap2a2 "adaptor-related protein complex 2, alpha 2 subunit"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=ISO] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 RGD:71015 GO:GO:0005886
Reactome:REACT_111984 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
GO:GO:0005905 GO:GO:0008289 GO:GO:0030131 SUPFAM:SSF55711
SUPFAM:SSF49348 eggNOG:NOG303101 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 HOVERGEN:HBG050518 OrthoDB:EOG4HMJ8J EMBL:X53773
IPI:IPI00471901 PIR:S11276 UniGene:Rn.34928 PDB:2VGL PDB:2XA7
PDBsum:2VGL PDBsum:2XA7 ProteinModelPortal:P18484 SMR:P18484
DIP:DIP-29765N IntAct:P18484 MINT:MINT-93156 STRING:P18484
PRIDE:P18484 UCSC:RGD:71015 InParanoid:P18484
EvolutionaryTrace:P18484 ArrayExpress:P18484 Genevestigator:P18484
GermOnline:ENSRNOG00000019534 Uniprot:P18484
Length = 938
Score = 102 (41.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 128 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTSRVVHLLND 198
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 62/316 (19%), Positives = 126/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 298 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 351
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 352 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSY 411
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 412 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 471
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 472 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLH 526
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL
Sbjct: 527 SKFHLCSVPTRALLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRLS 586
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 587 TVASTDILATVLEEMP 602
>UNIPROTKB|P18484 [details] [associations]
symbol:Ap2a2 "AP-2 complex subunit alpha-2" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
RGD:71015 GO:GO:0005886 Reactome:REACT_111984 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006897 GO:GO:0005905 GO:GO:0008289 GO:GO:0030131
SUPFAM:SSF55711 SUPFAM:SSF49348 eggNOG:NOG303101
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 HOVERGEN:HBG050518
OrthoDB:EOG4HMJ8J EMBL:X53773 IPI:IPI00471901 PIR:S11276
UniGene:Rn.34928 PDB:2VGL PDB:2XA7 PDBsum:2VGL PDBsum:2XA7
ProteinModelPortal:P18484 SMR:P18484 DIP:DIP-29765N IntAct:P18484
MINT:MINT-93156 STRING:P18484 PRIDE:P18484 UCSC:RGD:71015
InParanoid:P18484 EvolutionaryTrace:P18484 ArrayExpress:P18484
Genevestigator:P18484 GermOnline:ENSRNOG00000019534 Uniprot:P18484
Length = 938
Score = 102 (41.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 128 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTSRVVHLLND 198
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 62/316 (19%), Positives = 126/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 298 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 351
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 352 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSY 411
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 412 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 471
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 472 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLH 526
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL
Sbjct: 527 SKFHLCSVPTRALLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRLS 586
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 587 TVASTDILATVLEEMP 602
>UNIPROTKB|Q66HM2 [details] [associations]
symbol:Ap2a2 "AP-2 complex subunit alpha-2" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
RGD:71015 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0030131
SUPFAM:SSF55711 SUPFAM:SSF49348 HOGENOM:HOG000170596 KO:K11824
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 HOVERGEN:HBG050518
GeneTree:ENSGT00550000074757 CTD:161 IPI:IPI00471901
UniGene:Rn.34928 PDBsum:2XA7 EMBL:AC109542 EMBL:BC081786
RefSeq:NP_112270.2 SMR:Q66HM2 IntAct:Q66HM2 MINT:MINT-3375420
STRING:Q66HM2 Ensembl:ENSRNOT00000064254 GeneID:81637
KEGG:rno:81637 InParanoid:Q66HM2 NextBio:615128
Genevestigator:Q66HM2 Uniprot:Q66HM2
Length = 939
Score = 102 (41.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 128 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTSRVVHLLND 198
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 62/316 (19%), Positives = 126/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 299 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 352
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 353 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSY 412
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 413 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 472
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 473 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLH 527
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL
Sbjct: 528 SKFHLCSVPTRALLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRLS 587
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 588 TVASTDILATVLEEMP 603
>UNIPROTKB|G5E675 [details] [associations]
symbol:AP2A2 "AP-2 complex subunit alpha-2" species:9913
"Bos taurus" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 GeneTree:ENSGT00550000074757
EMBL:DAAA02063740 Ensembl:ENSBTAT00000053993 OMA:RINKLAN
Uniprot:G5E675
Length = 915
Score = 97 (39.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 28/131 (21%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 45 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 104
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +L+ + +LV
Sbjct: 105 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLHRASPDLVPVGD 164
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 165 WTSRVVHLLND 175
Score = 96 (38.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 65/315 (20%), Positives = 125/315 (39%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +AV + + + L+T D NL + L L E ++Y+AL ++
Sbjct: 276 KVQHSNAK---NAV--LFEAISLVTHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 330
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 331 CTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYL 390
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRY 379
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 391 ETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR- 449
Query: 380 PNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXX 431
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 450 -DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLTQFHLLHS 505
Query: 432 XXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLS 490
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL +
Sbjct: 506 KFHLCSVPTRALLLSTYIKFVNLFPEVKGTIQDVLRSDSQLKNADVELQQRAVEYLRLST 565
Query: 491 TDPEAAKDVVLAEKP 505
VL E P
Sbjct: 566 VASTDILATVLEEMP 580
>UNIPROTKB|Q0VCK5 [details] [associations]
symbol:AP2A2 "AP-2 complex subunit alpha-2" species:9913
"Bos taurus" [GO:0048268 "clathrin coat assembly" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030122 "AP-2
adaptor complex" evidence=IDA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006897 GO:GO:0008289 GO:GO:0048268 GO:GO:0030122
SUPFAM:SSF55711 SUPFAM:SSF49348 eggNOG:NOG303101
HOGENOM:HOG000170596 KO:K11824 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 HOVERGEN:HBG050518 OrthoDB:EOG4HMJ8J
EMBL:BC120121 IPI:IPI00842509 RefSeq:NP_001069170.1 UniGene:Bt.2041
ProteinModelPortal:Q0VCK5 SMR:Q0VCK5 STRING:Q0VCK5 PRIDE:Q0VCK5
GeneID:515216 KEGG:bta:515216 CTD:161 NextBio:20871716
Uniprot:Q0VCK5
Length = 938
Score = 97 (39.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 28/131 (21%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +L+ + +LV
Sbjct: 128 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLHRASPDLVPVGD 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTSRVVHLLND 198
Score = 96 (38.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 65/315 (20%), Positives = 125/315 (39%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +AV + + + L+T D NL + L L E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAV--LFEAISLVTHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 353
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 354 CTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRY 379
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 414 ETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR- 472
Query: 380 PNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXX 431
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 473 -DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLTQFHLLHS 528
Query: 432 XXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLS 490
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL +
Sbjct: 529 KFHLCSVPTRALLLSTYIKFVNLFPEVKGTIQDVLRSDSQLKNADVELQQRAVEYLRLST 588
Query: 491 TDPEAAKDVVLAEKP 505
VL E P
Sbjct: 589 VASTDILATVLEEMP 603
>WB|WBGene00000162 [details] [associations]
symbol:apd-3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0009792
GO:GO:0005794 GO:GO:0040007 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0010171 eggNOG:COG5096
GeneTree:ENSGT00550000075067 HOGENOM:HOG000000981 KO:K12396
InterPro:IPR010474 Pfam:PF06375 EMBL:FO081774 RefSeq:NP_494570.1
ProteinModelPortal:O16637 STRING:O16637 PaxDb:O16637 PRIDE:O16637
EnsemblMetazoa:W09G10.4a.1 EnsemblMetazoa:W09G10.4a.2 GeneID:173701
KEGG:cel:CELE_W09G10.4 UCSC:W09G10.4a CTD:173701 WormBase:W09G10.4a
InParanoid:O16637 OMA:ERACCAL NextBio:880723 ArrayExpress:O16637
Uniprot:O16637
Length = 1251
Score = 144 (55.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 83/443 (18%), Positives = 176/443 (39%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +V+ M + K++ YL + D+ +L N KD N
Sbjct: 68 LGYDISWASFNVIEVMASTKYTEKRIGYLAAAQSFHDETDVLMLTTNLIRKDVNSSNMYE 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + L Y RK A + + K++ + + R
Sbjct: 128 SGIALGGLSCFVTPDLARDLAADVVNLLSCSRNYTRKRAVLLLYKIFLKYPDAL--RPTF 185
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + KL+T + W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSSAVNVICELARKNPKNYLTLAP-VFFKLMTTSSN--NWMLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL-SAVKMILQQMELITST-DVVRN--L 238
+ R + ++E +T + + +L + ++ + I++ D + L
Sbjct: 243 KLFGALVPLEPRLGKKLLEPLTNLINSTSAMSLLYECINTVIAVLISISAGGDHTASIQL 302
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
C + L+ ++ ++Y+ L + I++ P + AH+ V C + +++ L
Sbjct: 303 CVQKLGVLIE--DSDQNLKYLGLLAMGKILKTHPKAVQAHKDIVLRCLDDKDESIRIRSL 360
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAV--RAIGRCA---IKLERAAERCISV 352
+++ + S +NI +++ + E+ + R + R IG C+ + E ISV
Sbjct: 361 DLLYGMVSKKNIVEIVKKLMEHVEAAEGSHYRDELLSRIIGICSWSNYQYITNFEWYISV 420
Query: 353 LLELIKI-------KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTL--DEPEAK 403
L+EL K+ K+ +Q+ + ++ I R + S +A L E+ L + +
Sbjct: 421 LVELTKVEGTEHGAKIAEQIQDVTVRVESI-RHFS---VSQMALLVENAHVLLAGSAQQR 476
Query: 404 ASMI-------WIIGEYAERIDN 419
++M WI GEY++ + N
Sbjct: 477 SNMCEVLLAAAWICGEYSQHVRN 499
>UNIPROTKB|E1C866 [details] [associations]
symbol:AP2A2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 GeneTree:ENSGT00550000074757
EMBL:AADN02030345 IPI:IPI00590871 Ensembl:ENSGALT00000010998
ArrayExpress:E1C866 Uniprot:E1C866
Length = 938
Score = 102 (41.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 128 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTSRVVHLLND 198
Score = 90 (36.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 62/316 (19%), Positives = 126/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 298 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 351
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 352 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLNY 411
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 412 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 471
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 472 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLH 526
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL
Sbjct: 527 SKFHLCSVPTRALLLSTYIKFVNLFPEIKTTIQDVLRSDSQLKNADVELQQRAVEYLRLS 586
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 587 TIASTDILATVLEEMP 602
>UNIPROTKB|F1NQB3 [details] [associations]
symbol:AP2A2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
GeneTree:ENSGT00550000074757 EMBL:AADN02030345 IPI:IPI00819995
Ensembl:ENSGALT00000039069 ArrayExpress:F1NQB3 Uniprot:F1NQB3
Length = 941
Score = 102 (41.0 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 70 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 129
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 130 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 189
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 190 WTSRVVHLLND 200
Score = 90 (36.7 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 62/316 (19%), Positives = 126/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 301 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 354
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 355 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLNY 414
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 415 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 474
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 475 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLH 529
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL
Sbjct: 530 SKFHLCSVPTRALLLSTYIKFVNLFPEIKTTIQDVLRSDSQLKNADVELQQRAVEYLRLS 589
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 590 TIASTDILATVLEEMP 605
>SGD|S000005231 [details] [associations]
symbol:SEC21 "Gamma subunit of coatomer" species:4932
"Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle coat"
evidence=IEA;IDA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IMP] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0030663 "COPI-coated
vesicle membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 SGD:S000005231
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0005768 EMBL:BK006947
GO:GO:0006888 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:KETEEGH OrthoDB:EOG4FFH8X EMBL:M59708
EMBL:Z71563 PIR:S63261 RefSeq:NP_014112.1 ProteinModelPortal:P32074
SMR:P32074 DIP:DIP-1611N IntAct:P32074 MINT:MINT-399140
STRING:P32074 PaxDb:P32074 PeptideAtlas:P32074 EnsemblFungi:YNL287W
GeneID:855429 KEGG:sce:YNL287W CYGD:YNL287w NextBio:979304
Genevestigator:P32074 GermOnline:YNL287W Uniprot:P32074
Length = 935
Score = 103 (41.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 62/319 (19%), Positives = 135/319 (42%)
Query: 223 LQQMELITSTDVVRNLCKKMAPPL----VTLLSAEPEIQYVALRNINLIVQRRPTILAHE 278
L+ +LITS RN + +AP L ++ L + + V+ R L + R ++++ E
Sbjct: 281 LETAKLITSF-ATRN-SRLVAPELYAAAISALQSLLTVPRVSSRFAALRILNRISMVSPE 338
Query: 279 IKVFFCK------YNDPIY-VKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKA 331
K+ C ND + + ++K + +NI ++ + +V DF
Sbjct: 339 -KIVVCNPELESLINDSNRNISTYAITTLLKTGTSKNISSLISTITNFIHDVSDDFKIII 397
Query: 332 VRAIGRCAIKLERAAERCISVLLELIK-IKVNYVVQEAII-VIKDIFRRYPNTYESIIAT 389
+ A+ ++ + + ++ L++++K + + + +I+ + DI P + E +
Sbjct: 398 IDAVRTLSLNFPQEWKSILNFLIDVLKNSEGGFKFKNSIVEALIDIVSFVPQSKELALEN 457
Query: 390 LCESLDTLDEPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXXXXAQVQLQLLTATVKL 449
LC+ ++ + E ++ ++G+ N + ++ + A K
Sbjct: 458 LCDFIEDCEFNEILVRILHLLGKEGPSAPNPSLYVRHIYNRVVLENSIIRSAAVVALSKF 517
Query: 450 FLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISD 509
L K + I +L + D+ ++RDRA I + D KD V+A+ + S
Sbjct: 518 ALTKNDPTLYESIISLLKRIANDKDD-EVRDRATIALEFI--DSARNKDDVIAQNLIESK 574
Query: 510 DSNQLDPSLLDELLANIAT 528
+ PSL +L + I++
Sbjct: 575 YFYDI-PSLESKLSSYISS 592
Score = 86 (35.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/128 (22%), Positives = 66/128 (51%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ ++LF + Q +N L++ VYL + + D+ ++A ++ +KD Q+ + LI+
Sbjct: 62 EATALFFSISKLFQHQNDPLRQAVYLAIKELSGISEDV-LMATSSIMKDVQNGSDLIKPD 120
Query: 66 AVRTMGCIRVDKITEYLCDPLQR-CLKDDDPYVRKTAAICVA-KLYDINAELVEDRGFLE 123
A+R++ + +D+ T + + L + + P + +AA+C + L I+ + R F
Sbjct: 121 AIRSLTYV-LDESTAFSAERLLKSAVVSRHPSI-SSAALCTSYHLLPISEVTI--RRFTN 176
Query: 124 SLKDLISD 131
++ + D
Sbjct: 177 ETQEAVLD 184
>TAIR|locus:2162419 [details] [associations]
symbol:alpha-ADR "alpha-adaptin" species:3702
"Arabidopsis thaliana" [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0008565 GO:GO:0006897 GO:GO:0005905
GO:GO:0008289 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
eggNOG:NOG303101 PROSITE:PS50180 EMBL:AB006699 EMBL:AB024030
EMBL:AY099568 EMBL:AK318657 EMBL:AK319011 IPI:IPI00528626
IPI:IPI00969742 IPI:IPI00969758 RefSeq:NP_197669.1
RefSeq:NP_851057.1 RefSeq:NP_851058.1 UniGene:At.46641 HSSP:P17427
ProteinModelPortal:Q8LPL6 SMR:Q8LPL6 IntAct:Q8LPL6 STRING:Q8LPL6
PaxDb:Q8LPL6 PRIDE:Q8LPL6 EnsemblPlants:AT5G22770.1
EnsemblPlants:AT5G22770.2 EnsemblPlants:AT5G22770.3 GeneID:832340
KEGG:ath:AT5G22770 TAIR:At5g22770 HOGENOM:HOG000170596
InParanoid:Q8LPL6 KO:K11824 OMA:PNKQAQM PhylomeDB:Q8LPL6
ProtClustDB:CLSN2687597 Genevestigator:Q8LPL6 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 Uniprot:Q8LPL6
Length = 1012
Score = 105 (42.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 33/131 (25%), Positives = 56/131 (42%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G DV + V+ + K++ Y+ D LA+NT D N
Sbjct: 62 LGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETF 121
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDD--PYVRKTAAICVAKLYDINAELVEDRG 120
+ LA+ +G I E L +Q+ L P VRK AA+C+ +L+ N + V G
Sbjct: 122 QCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDG 181
Query: 121 FLESLKDLISD 131
+ + + L+ +
Sbjct: 182 WADRMAQLLDE 192
Score = 91 (37.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 72/363 (19%), Positives = 142/363 (39%)
Query: 176 WGQVFILDALSRYKAAD---AREAE-NIVERV---TPRLQHANCAVVLSAVKMILQQMEL 228
W QV + AL + + R+A +++R+ T +++ N AV + + + L
Sbjct: 249 WLQVKAMRALQYFPTIEDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAV--LFEALSL 306
Query: 229 ITSTDVVRNLCKKMAPPLVTLLSA-EPEIQYVALRNIN---LIVQRRPTILAHEIKVFFC 284
+ D + + + L +S EP I+Y+ L N+ ++ + I H+ ++
Sbjct: 307 VMHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQII-T 365
Query: 285 KYNDP-IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLE 343
DP I ++ L+++ + N ++ E +Y + + +R+ + + AI E
Sbjct: 366 SLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFS-MREELSL--KAAILAE 422
Query: 344 RAAERC---ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLD--TLD 398
+ A + V+L+LI ++V + + + + E LD +
Sbjct: 423 KFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAASKAREYLDKIAIH 482
Query: 399 EPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXX----XXAQVQLQLLTAT-VKLFLKK 453
E K S +I+GEY + + + +L +T KL +
Sbjct: 483 ETMVKVSA-YILGEYGHLLARQPGCSASELFSILHEKLPTISTPTIPILLSTYAKLLMHA 541
Query: 454 PTEGP--QQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDS 511
P Q+ + V D +++ RA Y+ L P A DV LAE P +
Sbjct: 542 QPPDPELQKKVWAVFKKYESCID-VEIQQRAVEYFELSKKGP-AFMDV-LAEMPKFPERQ 598
Query: 512 NQL 514
+ L
Sbjct: 599 SSL 601
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 486 WRLLSTDPEAAKDVVLAEKPV 506
WR +S P ++VV +P+
Sbjct: 871 WRAISGPPLKLQEVVRGVRPL 891
>UNIPROTKB|F1PDT7 [details] [associations]
symbol:AP2A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 GeneTree:ENSGT00550000074757 OMA:KPALHET
EMBL:AAEX03011534 Ensembl:ENSCAFT00000015398 Uniprot:F1PDT7
Length = 859
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 27/121 (22%), Positives = 54/121 (44%)
Query: 13 DVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGC 72
+ VN + + K++ YL++ S +L L N D NP LA+ +
Sbjct: 2 EAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIAN 61
Query: 73 IRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRGFLESLKDLIS 130
+ ++ E + + L D V+++AA+C+ +LY + +LV + + L++
Sbjct: 62 VGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLN 121
Query: 131 D 131
D
Sbjct: 122 D 122
Score = 92 (37.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 62/316 (19%), Positives = 126/316 (39%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N AV+ A+ +I+ + +++ C ++ L E ++Y+AL +
Sbjct: 222 KVQHSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 275
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E + K + V+ ++++ + N Q++ E Y
Sbjct: 276 MCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSY 335
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRR 378
D + V + A K + +L LI+I +YV +E VI+ + R
Sbjct: 336 LETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINR 395
Query: 379 YPNTYESIIA-TLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXX 430
+ + A T+ E+L P +++ +I+GE+ I D +
Sbjct: 396 --DDVQGYAAKTVFEALQA---PACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLH 450
Query: 431 XXXXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLL 489
V + LL +T F+ E + V+ +++ ++ + +L+ RA Y RL
Sbjct: 451 SKFHLCSVPTRALLLSTYIKFVNLFPEVKTTIQDVLRSDSQLKNADVELQQRAVEYLRLS 510
Query: 490 STDPEAAKDVVLAEKP 505
+ VL E P
Sbjct: 511 TVASTDILATVLEEMP 526
>TAIR|locus:2157510 [details] [associations]
symbol:AT5G22780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0008565 GO:GO:0006897 GO:GO:0005905
GO:GO:0008289 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
eggNOG:NOG303101 PROSITE:PS50180 EMBL:AB024030 UniGene:At.46641
HSSP:P17427 HOGENOM:HOG000170596 KO:K11824 ProtClustDB:CLSN2687597
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 EMBL:AB025618 EMBL:AY099646
IPI:IPI00547724 RefSeq:NP_197670.1 UniGene:At.49048
ProteinModelPortal:Q8LPK4 SMR:Q8LPK4 IntAct:Q8LPK4 STRING:Q8LPK4
PaxDb:Q8LPK4 PRIDE:Q8LPK4 EnsemblPlants:AT5G22780.1 GeneID:832341
KEGG:ath:AT5G22780 TAIR:At5g22780 InParanoid:Q8LPK4 OMA:KPALHET
PhylomeDB:Q8LPK4 Genevestigator:Q8LPK4 Uniprot:Q8LPK4
Length = 1013
Score = 105 (42.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 33/131 (25%), Positives = 56/131 (42%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G DV + V+ + K++ Y+ D LA+NT D N
Sbjct: 62 LGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETF 121
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDD--PYVRKTAAICVAKLYDINAELVEDRG 120
+ LA+ +G I E L +Q+ L P VRK AA+C+ +L+ N + V G
Sbjct: 122 QCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDG 181
Query: 121 FLESLKDLISD 131
+ + + L+ +
Sbjct: 182 WADRMAQLLDE 192
Score = 89 (36.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 71/363 (19%), Positives = 142/363 (39%)
Query: 176 WGQVFILDALSRYKAAD---AREAE-NIVERV---TPRLQHANCAVVLSAVKMILQQMEL 228
W QV + AL + + R+A +++R+ T +++ N AV + + + L
Sbjct: 249 WLQVKAMRALQYFPTIEDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAV--LFEALSL 306
Query: 229 ITSTDVVRNLCKKMAPPLVTLLSA-EPEIQYVALRNIN---LIVQRRPTILAHEIKVFFC 284
+ D + + + L +S EP I+Y+ L N+ ++ + I H+ ++
Sbjct: 307 VMHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQII-T 365
Query: 285 KYNDP-IYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLE 343
DP I ++ L+++ + N ++ E +Y + + +R+ + + AI E
Sbjct: 366 SLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFS-MREELSL--KAAILAE 422
Query: 344 RAAERC---ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLD--TLD 398
+ A + V+L+LI ++V + + + + E +D +
Sbjct: 423 KFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAASKAREYMDKIAIH 482
Query: 399 EPEAKASMIWIIGEYAERIDNADXXXXXXXXXXXX----XXAQVQLQLLTAT-VKLFLKK 453
E K S +I+GEY + + + +L +T KL +
Sbjct: 483 ETMVKVSA-YILGEYGHLLARQPGCSASELFSILHEKLPTVSTPTIPILLSTYAKLLMHA 541
Query: 454 PTEGP--QQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDS 511
P Q+ + V D +++ RA Y+ L P A DV LAE P +
Sbjct: 542 QPPDPELQKKVWAVFKKYESCID-VEIQQRAVEYFELSKKGP-AFMDV-LAEMPKFPERQ 598
Query: 512 NQL 514
+ L
Sbjct: 599 SSL 601
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 486 WRLLSTDPEAAKDVVLAEKPV 506
WR +S P ++VV +P+
Sbjct: 871 WRAISGPPLKLQEVVRGVRPL 891
>UNIPROTKB|O14617 [details] [associations]
symbol:AP3D1 "AP-3 complex subunit delta-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0033365
"protein localization to organelle" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0048499 "synaptic vesicle membrane organization"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS]
[GO:0008089 "anterograde axon cargo transport" evidence=ISS]
[GO:0005215 "transporter activity" evidence=TAS] [GO:0005794 "Golgi
apparatus" evidence=TAS] [GO:0006726 "eye pigment biosynthetic
process" evidence=TAS] [GO:0061088 "regulation of sequestering of
zinc ion" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117 GO:GO:0008565
GO:GO:0005215 GO:GO:0010008 GO:GO:0008089 GO:GO:0033365
eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138 CTD:8943
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL GO:GO:0061088
GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375 EMBL:AF002163
EMBL:U91930 EMBL:AB208804 EMBL:AC005545 EMBL:BC010065 EMBL:AF130042
IPI:IPI00289608 IPI:IPI00411453 IPI:IPI00411677 IPI:IPI00413686
IPI:IPI00719680 RefSeq:NP_001248755.1 RefSeq:NP_003929.4
UniGene:Hs.512815 PDB:4AFI PDBsum:4AFI ProteinModelPortal:O14617
SMR:O14617 IntAct:O14617 STRING:O14617 PhosphoSite:O14617
PaxDb:O14617 PRIDE:O14617 Ensembl:ENST00000345016
Ensembl:ENST00000355272 GeneID:8943 KEGG:hsa:8943 UCSC:uc002luy.3
UCSC:uc002luz.3 UCSC:uc002lva.3 GeneCards:GC19M002101
H-InvDB:HIX0014607 HGNC:HGNC:568 MIM:607246 neXtProt:NX_O14617
PharmGKB:PA24859 HOVERGEN:HBG050520 ChiTaRS:AP3D1 GenomeRNAi:8943
NextBio:33636 ArrayExpress:O14617 Bgee:O14617 CleanEx:HS_AP3D1
Genevestigator:O14617 GermOnline:ENSG00000065000 GO:GO:0006726
Uniprot:O14617
Length = 1153
Score = 138 (53.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 71/436 (16%), Positives = 175/436 (40%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M K++ YL D+ +L N KD P+
Sbjct: 68 LGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSPSQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--SAVKMILQQMELITSTDVVRNLCK 240
+ R + ++E +T L H+ A+ L V ++ + ++S +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
++ + +L ++ ++Y+ L ++ I++ P ++ +H+ + C + +++ L
Sbjct: 302 QLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRAL 361
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAV--RAIGRCA---IKLERAAERCISV 352
+++ + S +N+ +++ + + + + R + + I C+ + E IS+
Sbjct: 362 DLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYISI 421
Query: 353 LLELIKIK-------VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
L+EL +++ + + + I +K I R++ + S + L + +
Sbjct: 422 LVELTRLEGTRHGHLIAAQMLDVAIRVKAI-RKFAVSQMSALLDSAHLLASSTQRNGICE 480
Query: 406 MI----WIIGEYAERI 417
++ WI GE++E +
Sbjct: 481 VLYAAAWICGEFSEHL 496
>GENEDB_PFALCIPARUM|PF14_0529 [details] [associations]
symbol:PF14_0529 "gamma-adaptin, putative"
species:5833 "Plasmodium falciparum" [GO:0005802 "trans-Golgi
network" evidence=ISS] [GO:0030131 "clathrin adaptor complex"
evidence=ISS] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 EMBL:AE014187 GO:GO:0005802 GO:GO:0030131
SUPFAM:SSF49348 HSSP:P22892 HOGENOM:HOG000210271 KO:K12391
Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
GO:GO:0044431 RefSeq:XP_001348703.1 ProteinModelPortal:Q8IKS3
IntAct:Q8IKS3 MINT:MINT-1570028 EnsemblProtists:PF14_0529:mRNA
GeneID:812111 KEGG:pfa:PF14_0529 EuPathDB:PlasmoDB:PF3D7_1455500
OMA:SNQYING ProtClustDB:CLSZ2432934 Uniprot:Q8IKS3
Length = 1081
Score = 107 (42.7 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 15 VNCMQ---TENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMG 71
+ C++ + K++ YL L D+ +L N+ D ++ N I LA+ +G
Sbjct: 66 IECLKLIASNKFSFKRIGYLGLTILLDENTDILMLVTNSIKNDLRNSNQYINGLALCALG 125
Query: 72 CIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
I ++ L + + ++PY++K AA+C ++ ++ E FLE + +L+ D
Sbjct: 126 NIANSEMCSSLRYEILDMMNINNPYIKKKAAMCAIRILKKTNDIEEL--FLEKINNLLDD 183
Score = 83 (34.3 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 33/173 (19%), Positives = 73/173 (42%)
Query: 249 LLSAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
L + + I+YV L + ++++ P T+ + + C + I ++ + L++ L +
Sbjct: 416 LQNNDNNIRYVGLCTLQKLLKKDPKTLHIYRNTIIECLKDQDISIRKKALDVAFALITKD 475
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
++ ++ E Y D++ V I K + + ++L + N++
Sbjct: 476 SLKIMVKELLNYLLVADIEIKSDIVSNICVSVNKYAPNVQYLLDTYIKLFCLAGNFIQDH 535
Query: 368 AIIVIKDIFRRY----PNTYESIIATLCESL-DTLDEPEAKASMIWIIGEYAE 415
IKD F Y P + ++ + S+ + LD+ IW IGE+ +
Sbjct: 536 ----IKDDFIYYLLQNPEFHSYVVFKIFFSIKENLDQYALIQVGIWCIGEFGD 584
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 506 VISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRTDDEDYPN 558
+ S QL PS + + N+ + ++ K P R+ + +D+ N
Sbjct: 1021 IFSASDKQLLPSEGNTIKQNLKIWNKLFKKKPVLMKVRLSYVKNNESFQDFIN 1073
>UNIPROTKB|Q8IKS3 [details] [associations]
symbol:PF14_0529 "Gamma-adaptin, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005802 "trans-Golgi network"
evidence=ISS] [GO:0030131 "clathrin adaptor complex" evidence=ISS]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
EMBL:AE014187 GO:GO:0005802 GO:GO:0030131 SUPFAM:SSF49348
HSSP:P22892 HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GO:GO:0044431
RefSeq:XP_001348703.1 ProteinModelPortal:Q8IKS3 IntAct:Q8IKS3
MINT:MINT-1570028 EnsemblProtists:PF14_0529:mRNA GeneID:812111
KEGG:pfa:PF14_0529 EuPathDB:PlasmoDB:PF3D7_1455500 OMA:SNQYING
ProtClustDB:CLSZ2432934 Uniprot:Q8IKS3
Length = 1081
Score = 107 (42.7 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 15 VNCMQ---TENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMG 71
+ C++ + K++ YL L D+ +L N+ D ++ N I LA+ +G
Sbjct: 66 IECLKLIASNKFSFKRIGYLGLTILLDENTDILMLVTNSIKNDLRNSNQYINGLALCALG 125
Query: 72 CIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
I ++ L + + ++PY++K AA+C ++ ++ E FLE + +L+ D
Sbjct: 126 NIANSEMCSSLRYEILDMMNINNPYIKKKAAMCAIRILKKTNDIEEL--FLEKINNLLDD 183
Score = 83 (34.3 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 33/173 (19%), Positives = 73/173 (42%)
Query: 249 LLSAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
L + + I+YV L + ++++ P T+ + + C + I ++ + L++ L +
Sbjct: 416 LQNNDNNIRYVGLCTLQKLLKKDPKTLHIYRNTIIECLKDQDISIRKKALDVAFALITKD 475
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQE 367
++ ++ E Y D++ V I K + + ++L + N++
Sbjct: 476 SLKIMVKELLNYLLVADIEIKSDIVSNICVSVNKYAPNVQYLLDTYIKLFCLAGNFIQDH 535
Query: 368 AIIVIKDIFRRY----PNTYESIIATLCESL-DTLDEPEAKASMIWIIGEYAE 415
IKD F Y P + ++ + S+ + LD+ IW IGE+ +
Sbjct: 536 ----IKDDFIYYLLQNPEFHSYVVFKIFFSIKENLDQYALIQVGIWCIGEFGD 584
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 506 VISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRTDDEDYPN 558
+ S QL PS + + N+ + ++ K P R+ + +D+ N
Sbjct: 1021 IFSASDKQLLPSEGNTIKQNLKIWNKLFKKKPVLMKVRLSYVKNNESFQDFIN 1073
>RGD|1566215 [details] [associations]
symbol:Copg2 "coatomer protein complex, subunit gamma 2"
species:10116 "Rattus norvegicus" [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 RGD:1566215
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GeneTree:ENSGT00390000016313
InterPro:IPR017106 PANTHER:PTHR10261 IPI:IPI00767794
Ensembl:ENSRNOT00000033706 UCSC:RGD:1566215 OrthoDB:EOG4CG093
ArrayExpress:D4ABY2 Uniprot:D4ABY2
Length = 490
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 71/414 (17%), Positives = 169/414 (40%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + F + Q+ + L+++ YL + A D+ I+ ++ KD + R
Sbjct: 65 EATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDV-IIVTSSLTKDMTGKEDVYRGP 123
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I + + + +++ + D V +A + + I+ ++V+ R E+
Sbjct: 124 AIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVK-RWINEAQ 182
Query: 126 KDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
+ SD + T S L + C + I L
Sbjct: 183 EAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCM---LIRIASRL 239
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPP 245
+ ++ D E+ + + + L++ + V+ A I+ L T R L ++
Sbjct: 240 LK-ESEDGHESP-LFDFIESCLRNKHEMVIYEAASAIIH---LPNCT--ARELAPAVSVL 292
Query: 246 LVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 304
+ S +P ++Y A+R +N + + P+ + A + + + + + ++K
Sbjct: 293 QLFCSSPKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTG 352
Query: 305 SDRNIDQVLLEFKEYATEVDVDF-VRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNY 363
S+ ++D+++ + + +E+ +F V V+AI K R ++ L +++ +
Sbjct: 353 SESSVDRLMKQISSFVSEISDEFKVSGVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGF 412
Query: 364 VVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAER 416
++AI+ I I P + E+ +A LCE ++ + ++ ++G+ R
Sbjct: 413 EYKKAIVDCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPR 466
>UNIPROTKB|F1PE67 [details] [associations]
symbol:AP2A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 OMA:NIKFRYG GeneTree:ENSGT00550000074757
EMBL:AAEX03000795 Ensembl:ENSCAFT00000005702 Uniprot:F1PE67
Length = 982
Score = 101 (40.6 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + R L D V+++AA+C+ +LY + +LV
Sbjct: 128 MCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGE 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTARVVHLLND 198
Score = 82 (33.9 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 64/314 (20%), Positives = 116/314 (36%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +A+ + + + LI D NL + L L E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAI--LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 353
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H + + K + V+ +++ + N Q++ E Y
Sbjct: 354 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYP 380
D + V + A K + +L LI+I +YV +E + I
Sbjct: 414 ETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRD 473
Query: 381 NTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXXXX 433
+ T+ E+L P +M+ +I+GE+ I D +
Sbjct: 474 DVQGYAAKTVFEALQA---PACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKF 530
Query: 434 XXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLN-NATVETDNPDLRDRAYIYWRLLST 491
V + LL +T F+ E + IQ VL + + + +L+ RA Y L S
Sbjct: 531 HLCSVATRALLLSTYIKFINLFPE-TKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSV 589
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 590 ASTDVLATVLEEMP 603
Score = 46 (21.3 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 486 WRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFV 541
W+ LS + A+ + A P+I L +LL +LL + L PE FV
Sbjct: 880 WKQLSLPQQEAQKIFKANHPMIWPP---LTAALLPQLLGFGSALLDNVDPNPENFV 932
>SGD|S000006233 [details] [associations]
symbol:APL4 "Gamma-adaptin" species:4932 "Saccharomyces
cerevisiae" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA;ISS;IPI] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IMP] [GO:0030276 "clathrin binding" evidence=ISS;IPI]
[GO:0030121 "AP-1 adaptor complex" evidence=ISS;IPI] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 SGD:S000006233 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
EMBL:Z71255 EMBL:BK006949 GO:GO:0030121 GO:GO:0030276 EMBL:Z49274
SUPFAM:SSF49348 GO:GO:0006896 eggNOG:NOG303101 HOGENOM:HOG000210271
KO:K12391 OMA:VETIMAI Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5
PROSITE:PS50180 GeneTree:ENSGT00390000012618 OrthoDB:EOG4X9BRC
PIR:S54503 RefSeq:NP_015354.1 ProteinModelPortal:Q12028 SMR:Q12028
DIP:DIP-3913N IntAct:Q12028 MINT:MINT-475384 STRING:Q12028
PaxDb:Q12028 PeptideAtlas:Q12028 EnsemblFungi:YPR029C GeneID:856141
KEGG:sce:YPR029C CYGD:YPR029c NextBio:981253 Genevestigator:Q12028
GermOnline:YPR029C Uniprot:Q12028
Length = 832
Score = 97 (39.2 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 27/104 (25%), Positives = 48/104 (46%)
Query: 15 VNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIR 74
+N + +++ K+L YL DL L N D PN +LA+ ++G +
Sbjct: 71 INLIASDDFVDKRLGYLAATLLLDESEDLLTLLTNMLNNDLHHPNKYAVSLALTSLGFLS 130
Query: 75 VDKITEYLCDPLQRCLKDD-DPYVRKTAAICVAKLYDINAELVE 117
++ L ++ +K+ DP++ K A C AKL + L+E
Sbjct: 131 SPELARDLYPDVENIIKNSRDPFLLKKALQCAAKLIFKDVSLLE 174
Score = 89 (36.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 36/185 (19%), Positives = 77/185 (41%)
Query: 249 LLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDR 307
L + +YV+L + +V + PT + H + C + + ++M LE+ + D
Sbjct: 347 LAGKDNNTKYVSLNTLLKVVPQEPTAVQRHRKFISHCLQDTDVSIRMRALELSFAILDDS 406
Query: 308 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERC----ISVLLELIKIK--- 360
N+ +++ E ++ + D D + I + + + V ++K+
Sbjct: 407 NLVELVNELMKFLAKQDEDSKDLIIYTIDHLIDTFDTRVVKDESWKLDVFFNILKLVGSF 466
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLD----TLDEPEA--KASMIWIIGEYA 414
+NY I++I + + + E + L SL+ + E + +IW IGEY
Sbjct: 467 INYEKINDILIIINNTSQLSDKSEFLRKMLTISLNGTSAEISEENIGWQLVLIWCIGEYG 526
Query: 415 ERIDN 419
+ + N
Sbjct: 527 DLVLN 531
Score = 40 (19.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 607 DLLGDLIGLDNSA 619
DLL DL+G D+ A
Sbjct: 655 DLLSDLLGEDSKA 667
>MGI|MGI:107734 [details] [associations]
symbol:Ap3d1 "adaptor-related protein complex 3, delta 1
subunit" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006829 "zinc ion transport"
evidence=TAS] [GO:0006886 "intracellular protein transport"
evidence=IMP;TAS] [GO:0008089 "anterograde axon cargo transport"
evidence=IMP] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=ISO;IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0019882 "antigen processing and presentation"
evidence=IMP] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0043195 "terminal bouton"
evidence=IDA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IMP] [GO:0048490
"anterograde synaptic vesicle transport" evidence=IMP] [GO:0048499
"synaptic vesicle membrane organization" evidence=IMP] [GO:0051138
"positive regulation of NK T cell differentiation" evidence=IMP]
[GO:0061088 "regulation of sequestering of zinc ion"
evidence=ISO;TAS] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 MGI:MGI:107734
GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117 GO:GO:0008565
GO:GO:0043195 GO:GO:0010008 GO:GO:0008089 GO:GO:0005802
GO:GO:0033365 eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007
GO:GO:0051138 GO:GO:0006829 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL OrthoDB:EOG45TCMD
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
HOVERGEN:HBG050520 ChiTaRS:AP3D1 EMBL:AB004305 EMBL:BC048786
EMBL:BC053066 IPI:IPI00117811 PIR:T13946 RefSeq:NP_031486.1
UniGene:Mm.209294 ProteinModelPortal:O54774 SMR:O54774
DIP:DIP-32163N IntAct:O54774 STRING:O54774 PhosphoSite:O54774
PaxDb:O54774 PRIDE:O54774 Ensembl:ENSMUST00000020420 GeneID:11776
KEGG:mmu:11776 UCSC:uc007gek.1 InParanoid:O54774 NextBio:279571
Bgee:O54774 Genevestigator:O54774 GermOnline:ENSMUSG00000020198
Uniprot:O54774
Length = 1199
Score = 136 (52.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 55/327 (16%), Positives = 132/327 (40%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M K++ YL D+ +L N KD P+
Sbjct: 68 LGYDISWAAFNIIEVMSASKFTFKRVGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--SAVKMILQQMELITSTDVVRNLCK 240
+ R + ++E +T L H+ A+ L V ++ + ++S +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
++ + +L ++ ++Y+ L ++ I++ P ++ +H+ + C + +++ L
Sbjct: 302 QLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRAL 361
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVD 324
+++ + S +N+ +++ K+ T VD
Sbjct: 362 DLLYGMVSKKNLMEIV---KKLMTHVD 385
>UNIPROTKB|J9NWS6 [details] [associations]
symbol:AP2A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K11824
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 CTD:160
GeneTree:ENSGT00550000074757 EMBL:AAEX03000795
RefSeq:XP_003638863.1 Ensembl:ENSCAFT00000043790 GeneID:484375
KEGG:cfa:484375 Uniprot:J9NWS6
Length = 956
Score = 101 (40.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + R L D V+++AA+C+ +LY + +LV
Sbjct: 128 MCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGE 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTARVVHLLND 198
Score = 82 (33.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 64/314 (20%), Positives = 116/314 (36%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +A+ + + + LI D NL + L L E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAI--LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 353
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H + + K + V+ +++ + N Q++ E Y
Sbjct: 354 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYP 380
D + V + A K + +L LI+I +YV +E + I
Sbjct: 414 ETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRD 473
Query: 381 NTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXXXX 433
+ T+ E+L P +M+ +I+GE+ I D +
Sbjct: 474 DVQGYAAKTVFEALQA---PACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKF 530
Query: 434 XXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLN-NATVETDNPDLRDRAYIYWRLLST 491
V + LL +T F+ E + IQ VL + + + +L+ RA Y L S
Sbjct: 531 HLCSVATRALLLSTYIKFINLFPE-TKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSV 589
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 590 ASTDVLATVLEEMP 603
>UNIPROTKB|I3LK24 [details] [associations]
symbol:AP2A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
KO:K11824 Gene3D:2.60.40.1030 Gene3D:3.30.310.30 CTD:160
GeneTree:ENSGT00550000074757 EMBL:CU694867 UniGene:Ssc.45388
GeneID:100520250 KEGG:ssc:100520250 RefSeq:XP_003127387.1
Ensembl:ENSSSCT00000026861 Uniprot:I3LK24
Length = 956
Score = 101 (40.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + R L D V+++AA+C+ +LY + +LV
Sbjct: 128 MCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGE 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTARVVHLLND 198
Score = 82 (33.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 64/314 (20%), Positives = 116/314 (36%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +A+ + + + LI D NL + L L E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAI--LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 353
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H + + K + V+ +++ + N Q++ E Y
Sbjct: 354 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYP 380
D + V + A K + +L LI+I +YV +E + I
Sbjct: 414 ETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRD 473
Query: 381 NTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXXXX 433
+ T+ E+L P +M+ +I+GE+ I D +
Sbjct: 474 DVQGYAAKTVFEALQA---PACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKF 530
Query: 434 XXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLN-NATVETDNPDLRDRAYIYWRLLST 491
V + LL +T F+ E + IQ VL + + + +L+ RA Y L S
Sbjct: 531 HLCSVATRALLLSTYIKFINLFPE-TKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSV 589
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 590 ASTDVLATVLEEMP 603
>UNIPROTKB|O95782 [details] [associations]
symbol:AP2A1 "AP-2 complex subunit alpha-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0016323 "basolateral plasma membrane"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0006895 "Golgi to endosome transport" evidence=NAS] [GO:0030122
"AP-2 adaptor complex" evidence=NAS] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=NAS] [GO:0006886
"intracellular protein transport" evidence=NAS] [GO:0006897
"endocytosis" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007173 "epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] [GO:0042059 "negative
regulation of epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050690 "regulation of defense response
to virus by virus" evidence=TAS] Reactome:REACT_13685
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
GO:GO:0005829 Reactome:REACT_111045 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0007411
GO:GO:0007173 GO:GO:0048011 GO:GO:0006886 GO:GO:0050690
GO:GO:0016032 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0019886 GO:GO:0008565 GO:GO:0016324 GO:GO:0007268
GO:GO:0006897 GO:GO:0016323 EMBL:AC011495 GO:GO:0030122
SUPFAM:SSF55711 SUPFAM:SSF49348 eggNOG:NOG303101 GO:GO:0006895
HOGENOM:HOG000170596 KO:K11824 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 EMBL:AF289221 EMBL:AL136925 EMBL:AC006942
EMBL:AC098783 EMBL:BC014214 IPI:IPI00256684 IPI:IPI00304577
RefSeq:NP_055018.2 RefSeq:NP_570603.2 UniGene:Hs.467125
ProteinModelPortal:O95782 SMR:O95782 IntAct:O95782
MINT:MINT-5002322 STRING:O95782 PhosphoSite:O95782 PaxDb:O95782
PRIDE:O95782 DNASU:160 Ensembl:ENST00000354293
Ensembl:ENST00000359032 GeneID:160 KEGG:hsa:160 UCSC:uc002ppn.3
UCSC:uc002ppo.3 CTD:160 GeneCards:GC19P050270 HGNC:HGNC:561
HPA:CAB004306 MIM:601026 neXtProt:NX_O95782 PharmGKB:PA24852
HOVERGEN:HBG050518 InParanoid:O95782 OMA:NIKFRYG
Pathway_Interaction_DB:arf_3pathway ChiTaRS:AP2A1 GenomeRNAi:160
NextBio:637 ArrayExpress:O95782 Bgee:O95782 CleanEx:HS_AP2A1
Genevestigator:O95782 GermOnline:ENSG00000196961 GO:GO:0030130
GO:GO:0042059 Uniprot:O95782
Length = 977
Score = 101 (40.6 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + R L D V+++AA+C+ +LY + +LV
Sbjct: 128 MCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGE 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTARVVHLLND 198
Score = 82 (33.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 64/314 (20%), Positives = 116/314 (36%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +A+ + + + LI D NL + L L E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAI--LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 353
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H + + K + V+ +++ + N Q++ E Y
Sbjct: 354 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYP 380
D + V + A K + +L LI+I +YV +E + I
Sbjct: 414 ETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRD 473
Query: 381 NTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXXXX 433
+ T+ E+L P +M+ +I+GE+ I D +
Sbjct: 474 DVQGYAAKTVFEALQA---PACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKF 530
Query: 434 XXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLN-NATVETDNPDLRDRAYIYWRLLST 491
V + LL +T F+ E + IQ VL + + + +L+ RA Y L S
Sbjct: 531 HLCSVATRALLLSTYIKFINLFPE-TKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSV 589
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 590 ASTDVLATVLEEMP 603
>MGI|MGI:101921 [details] [associations]
symbol:Ap2a1 "adaptor-related protein complex 2, alpha 1
subunit" species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=TAS] [GO:0016323 "basolateral
plasma membrane" evidence=ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0030117 "membrane coat" evidence=IDA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030141 "secretory
granule" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
MGI:MGI:101921 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
GO:GO:0016324 GO:GO:0030141 GO:GO:0006897 GO:GO:0005905
GO:GO:0016323 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
eggNOG:NOG303101 HOGENOM:HOG000170596 KO:K11824 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 CTD:160 HOVERGEN:HBG050518 OMA:NIKFRYG
ChiTaRS:AP2A1 EMBL:X14971 EMBL:BC031433 IPI:IPI00108780
IPI:IPI00622911 PIR:A30111 RefSeq:NP_001070732.1 RefSeq:NP_031484.1
UniGene:Mm.6877 ProteinModelPortal:P17426 SMR:P17426 IntAct:P17426
MINT:MINT-1865011 STRING:P17426 PhosphoSite:P17426 PaxDb:P17426
PRIDE:P17426 Ensembl:ENSMUST00000085399 Ensembl:ENSMUST00000107857
Ensembl:ENSMUST00000166972 Ensembl:ENSMUST00000167930 GeneID:11771
KEGG:mmu:11771 UCSC:uc009grv.1 UCSC:uc009grw.1
GeneTree:ENSGT00550000074757 InParanoid:P17426 OrthoDB:EOG4HMJ8J
NextBio:279549 PMAP-CutDB:P17426 Bgee:P17426 CleanEx:MM_AP2A1
Genevestigator:P17426 GermOnline:ENSMUSG00000060279 Uniprot:P17426
Length = 977
Score = 101 (40.6 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + R L D V+++AA+C+ +LY + +LV
Sbjct: 128 MCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGE 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTARVVHLLND 198
Score = 82 (33.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 64/314 (20%), Positives = 116/314 (36%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +A+ + + + LI D NL + L L E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAI--LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 353
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H + + K + V+ +++ + N Q++ E Y
Sbjct: 354 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYP 380
D + V + A K + +L LI+I +YV +E + I
Sbjct: 414 ETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRD 473
Query: 381 NTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXXXX 433
+ T+ E+L P +M+ +I+GE+ I D +
Sbjct: 474 DVQGYAAKTVFEALQA---PACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKF 530
Query: 434 XXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLN-NATVETDNPDLRDRAYIYWRLLST 491
V + LL +T F+ E + IQ VL + + + +L+ RA Y L S
Sbjct: 531 HLCSVATRALLLSTYIKFINLFPE-TKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSV 589
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 590 ASTDVLATVLEEMP 603
>RGD|1306254 [details] [associations]
symbol:Ap2a1 "adaptor-related protein complex 2, alpha 1
subunit" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0008150 "biological_process" evidence=ND]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=IDA] [GO:0016324 "apical
plasma membrane" evidence=IDA] [GO:0030117 "membrane coat"
evidence=ISO] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 RGD:1306254
GO:GO:0006886 GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0016324
GO:GO:0016323 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
KO:K11824 Gene3D:2.60.40.1030 Gene3D:3.30.310.30 CTD:160
GeneTree:ENSGT00550000074757 OrthoDB:EOG4HMJ8J EMBL:CH473979
IPI:IPI00764057 RefSeq:NP_001100981.1 UniGene:Rn.162416
Ensembl:ENSRNOT00000020304 GeneID:308578 KEGG:rno:308578
UCSC:RGD:1306254 NextBio:659166 Uniprot:D3ZUY8
Length = 977
Score = 101 (40.6 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + R L D V+++AA+C+ +LY + +LV
Sbjct: 128 MCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGE 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTARVVHLLND 198
Score = 82 (33.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 64/314 (20%), Positives = 116/314 (36%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +A+ + + + LI D NL + L L E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAI--LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 353
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H + + K + V+ +++ + N Q++ E Y
Sbjct: 354 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYP 380
D + V + A K + +L LI+I +YV +E + I
Sbjct: 414 ETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRD 473
Query: 381 NTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXXXX 433
+ T+ E+L P +M+ +I+GE+ I D +
Sbjct: 474 DVQGYAAKTVFEALQA---PACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKF 530
Query: 434 XXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLN-NATVETDNPDLRDRAYIYWRLLST 491
V + LL +T F+ E + IQ VL + + + +L+ RA Y L S
Sbjct: 531 HLCSVATRALLLSTYIKFINLFPE-TKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSV 589
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 590 ASTDVLATVLEEMP 603
>UNIPROTKB|F1RH60 [details] [associations]
symbol:AP2A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
KO:K11824 Gene3D:2.60.40.1030 Gene3D:3.30.310.30 CTD:160
OMA:NIKFRYG GeneTree:ENSGT00550000074757 EMBL:CU694867
RefSeq:XP_003127386.1 UniGene:Ssc.45388 Ensembl:ENSSSCT00000003554
GeneID:100520250 KEGG:ssc:100520250 Uniprot:F1RH60
Length = 978
Score = 101 (40.6 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + R L D V+++AA+C+ +LY + +LV
Sbjct: 128 MCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGE 187
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 188 WTARVVHLLND 198
Score = 82 (33.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 64/314 (20%), Positives = 116/314 (36%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +A+ + + + LI D NL + L L E ++Y+AL ++
Sbjct: 299 KVQHSNAK---NAI--LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 353
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H + + K + V+ +++ + N Q++ E Y
Sbjct: 354 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 413
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYP 380
D + V + A K + +L LI+I +YV +E + I
Sbjct: 414 ETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRD 473
Query: 381 NTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXXXX 433
+ T+ E+L P +M+ +I+GE+ I D +
Sbjct: 474 DVQGYAAKTVFEALQA---PACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKF 530
Query: 434 XXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLN-NATVETDNPDLRDRAYIYWRLLST 491
V + LL +T F+ E + IQ VL + + + +L+ RA Y L S
Sbjct: 531 HLCSVATRALLLSTYIKFINLFPE-TKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSV 589
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 590 ASTDVLATVLEEMP 603
>UNIPROTKB|E1BWK3 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 CTD:8943
GeneTree:ENSGT00550000075067 KO:K12396 InterPro:IPR010474
Pfam:PF06375 EMBL:AADN02066738 IPI:IPI00819277
RefSeq:XP_003642902.1 UniGene:Gga.55207 Ensembl:ENSGALT00000041197
GeneID:420079 KEGG:gga:420079 ArrayExpress:E1BWK3 Uniprot:E1BWK3
Length = 1153
Score = 145 (56.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 71/440 (16%), Positives = 177/440 (40%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M K++ YL D+ +L N KD PN
Sbjct: 68 LGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPNQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--SAVKMILQQMELITSTDVVRNLCK 240
+ R + ++E +T L H+ A+ L V ++ + ++S +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
++ + +L ++ ++Y+ L ++ I++ P ++ +H+ + C + +++ L
Sbjct: 302 QLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRAL 361
Query: 298 EIMIKLASDRNIDQVLLEF-----KEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
+++ + S +N+ +++ + K T + + K + + + E IS+
Sbjct: 362 DLLYGMVSKKNLMEIVKKLMIHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYISI 421
Query: 353 LLELIKIK-------VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
L+EL +++ + + + I +K I R++ + +++ + + +
Sbjct: 422 LVELTRLEGTRHGHLIAAQMLDVAIRVKAI-RKFAVSQMAMLLDNAHLIASNTQRNGICE 480
Query: 406 MI----WIIGEYAERIDNAD 421
++ WI GE++E ++ A+
Sbjct: 481 VLYAAAWICGEFSEHLEEAN 500
Score = 37 (18.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 507 ISDDSNQLDPSLLDELLANIA-TLS 530
+S D DP+LL LL + TLS
Sbjct: 1127 VSIDGKCSDPTLLSNLLDEMKETLS 1151
>UNIPROTKB|E1BMW2 [details] [associations]
symbol:E1BMW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 OMA:NIKFRYG
GeneTree:ENSGT00550000074757 EMBL:DAAA02047483 EMBL:DAAA02047484
EMBL:DAAA02047485 IPI:IPI01017757 Ensembl:ENSBTAT00000043179
ArrayExpress:E1BMW2 Uniprot:E1BMW2
Length = 968
Score = 101 (40.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 97 LGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 156
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + R L D V+++AA+C+ +LY + +LV
Sbjct: 157 MCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGE 216
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 217 WTARVVHLLND 227
Score = 81 (33.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 63/314 (20%), Positives = 118/314 (37%)
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNI 264
++QH+N +A+ + + + LI D NL + L L E ++Y+AL ++
Sbjct: 328 KVQHSNAK---NAI--LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESM 382
Query: 265 NLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
+ + H + + K + V+ +++ + N Q++ E Y
Sbjct: 383 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 442
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYP 380
D + V + A K + +L LI+I +YV +E + I
Sbjct: 443 ETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRD 502
Query: 381 NTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERIDNADXXXXXXXXXXXXXXA 436
+ T+ E+L P +M+ +I+GE+ I A +
Sbjct: 503 DVQGYAAKTVFEALQA---PACHENMVKVGGYILGEFGNLI--AGDPRSSPPVQFSLLHS 557
Query: 437 QVQL-QLLTATVKL--FLKKPTEGPQ-QMIQVVLN-NATVETDNPDLRDRAYIYWRLLST 491
+ L + T + L ++K P+ + IQ VL + + + +L+ RA Y L S
Sbjct: 558 KFHLCSVATRALLLSTYIKFINLFPETKTIQGVLRAGSQLRNADVELQQRAVEYLTLSSV 617
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 618 ASTDVLATVLEEMP 631
>UNIPROTKB|E1C262 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0033365 "protein localization to organelle" evidence=IEA]
[GO:0043195 "terminal bouton" evidence=IEA] [GO:0048007 "antigen
processing and presentation, exogenous lipid antigen via MHC class
Ib" evidence=IEA] [GO:0048490 "anterograde synaptic vesicle
transport" evidence=IEA] [GO:0048499 "synaptic vesicle membrane
organization" evidence=IEA] [GO:0051138 "positive regulation of NK
T cell differentiation" evidence=IEA] [GO:0061088 "regulation of
sequestering of zinc ion" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR017105 Pfam:PF01602
PIRSF:PIRSF037092 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 GO:GO:0010008 GO:GO:0033365 GO:GO:0048007
GO:GO:0051138 GeneTree:ENSGT00550000075067 OMA:VCKLTYL
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
EMBL:AADN02066738 IPI:IPI00573196 Ensembl:ENSGALT00000001472
ArrayExpress:E1C262 Uniprot:E1C262
Length = 1208
Score = 145 (56.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 71/440 (16%), Positives = 177/440 (40%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M K++ YL D+ +L N KD PN
Sbjct: 68 LGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPNQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--SAVKMILQQMELITSTDVVRNLCK 240
+ R + ++E +T L H+ A+ L V ++ + ++S +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
++ + +L ++ ++Y+ L ++ I++ P ++ +H+ + C + +++ L
Sbjct: 302 QLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRAL 361
Query: 298 EIMIKLASDRNIDQVLLEF-----KEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
+++ + S +N+ +++ + K T + + K + + + E IS+
Sbjct: 362 DLLYGMVSKKNLMEIVKKLMIHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYISI 421
Query: 353 LLELIKIK-------VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
L+EL +++ + + + I +K I R++ + +++ + + +
Sbjct: 422 LVELTRLEGTRHGHLIAAQMLDVAIRVKAI-RKFAVSQMAMLLDNAHLIASNTQRNGICE 480
Query: 406 MI----WIIGEYAERIDNAD 421
++ WI GE++E ++ A+
Sbjct: 481 VLYAAAWICGEFSEHLEEAN 500
Score = 37 (18.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 507 ISDDSNQLDPSLLDELLANIA-TLS 530
+S D DP+LL LL + TLS
Sbjct: 1182 VSIDGKCSDPTLLSNLLDEMKETLS 1206
>UNIPROTKB|E1BR25 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
EMBL:AADN02045349 EMBL:AADN02045350 IPI:IPI00570896
Ensembl:ENSGALT00000007625 ArrayExpress:E1BR25 Uniprot:E1BR25
Length = 1139
Score = 108 (43.1 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 37/174 (21%), Positives = 84/174 (48%)
Query: 176 WGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV 235
W Q+ +L L D R +E + + + L+ A ++ ++ + ++ I +
Sbjct: 276 WLQIQLLRILGLLGKDDNRTSELMYDVLEESLRRAEINHNITYA-ILFECVQTIYTIYPK 334
Query: 236 RNLCKKMAPPLVT-LLSAEPEIQYVALRNINLIVQRRPTI-LAHEIKVFFC-KYNDPIYV 292
L +K A + +LS + ++Y+ L+ + ++Q+ P + L H++ + C + DPI +
Sbjct: 335 SELLEKAAKCIGKFVLSPQINLKYLGLKALTCVIQQDPNLALEHQMTIIECLDHPDPI-I 393
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 346
K E LEI+ ++ + N+ ++ + +Y E ++ + G+ A E+ A
Sbjct: 394 KRETLEILYRITNGHNVVVIVQKMLDYLKETREEYA--IITLAGKIAELAEKYA 445
Score = 76 (31.8 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G + S + + Q NL K++ YL + + +L +L VNT VKD Q N +
Sbjct: 94 LGYESSFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVVKDLQSTNLVE 153
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
++A+ + I ++ + ++ L+ +R+ A + K Y I V+
Sbjct: 154 VSMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVQALYKFYLIAPNQVQ 208
Score = 41 (19.5 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 406 MIWIIGEYAERIDNAD 421
M W++GEY+ + D
Sbjct: 518 MSWVLGEYSSLATDVD 533
>UNIPROTKB|E1BR26 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
EMBL:AADN02045349 EMBL:AADN02045350 IPI:IPI00575379
Ensembl:ENSGALT00000007624 ArrayExpress:E1BR26 Uniprot:E1BR26
Length = 1144
Score = 108 (43.1 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 37/174 (21%), Positives = 84/174 (48%)
Query: 176 WGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV 235
W Q+ +L L D R +E + + + L+ A ++ ++ + ++ I +
Sbjct: 276 WLQIQLLRILGLLGKDDNRTSELMYDVLEESLRRAEINHNITYA-ILFECVQTIYTIYPK 334
Query: 236 RNLCKKMAPPLVT-LLSAEPEIQYVALRNINLIVQRRPTI-LAHEIKVFFC-KYNDPIYV 292
L +K A + +LS + ++Y+ L+ + ++Q+ P + L H++ + C + DPI +
Sbjct: 335 SELLEKAAKCIGKFVLSPQINLKYLGLKALTCVIQQDPNLALEHQMTIIECLDHPDPI-I 393
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 346
K E LEI+ ++ + N+ ++ + +Y E ++ + G+ A E+ A
Sbjct: 394 KRETLEILYRITNGHNVVVIVQKMLDYLKETREEYA--IITLAGKIAELAEKYA 445
Score = 76 (31.8 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G + S + + Q NL K++ YL + + +L +L VNT VKD Q N +
Sbjct: 94 LGYESSFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVVKDLQSTNLVE 153
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
++A+ + I ++ + ++ L+ +R+ A + K Y I V+
Sbjct: 154 VSMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVQALYKFYLIAPNQVQ 208
Score = 41 (19.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 406 MIWIIGEYAERIDNAD 421
M W++GEY+ + D
Sbjct: 518 MSWVLGEYSSLATDVD 533
>UNIPROTKB|Q865S1 [details] [associations]
symbol:AP3D1 "AP-3 complex subunit delta-1" species:9913
"Bos taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0061088 "regulation of sequestering of zinc ion" evidence=IEA]
[GO:0051138 "positive regulation of NK T cell differentiation"
evidence=IEA] [GO:0048499 "synaptic vesicle membrane organization"
evidence=IEA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0033365 "protein localization
to organelle" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR017105 Pfam:PF01602
PIRSF:PIRSF037092 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117
GO:GO:0008565 GO:GO:0010008 GO:GO:0008089 GO:GO:0033365
eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138
EMBL:AB015979 EMBL:S75828 EMBL:M98430 IPI:IPI00685602
RefSeq:NP_776423.3 UniGene:Bt.8223 ProteinModelPortal:Q865S1
STRING:Q865S1 PRIDE:Q865S1 Ensembl:ENSBTAT00000011906 GeneID:281023
KEGG:bta:281023 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 HOVERGEN:HBG004853 InParanoid:Q865S1 KO:K12396
OMA:VCKLTYL OrthoDB:EOG45TCMD NextBio:20805113 ArrayExpress:Q865S1
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
Uniprot:Q865S1
Length = 1207
Score = 142 (55.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 73/435 (16%), Positives = 170/435 (39%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M K++ YL D+ +L N KD P+
Sbjct: 68 LGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--SAVKMILQQMELITSTDVVRNLCK 240
+ R + ++E +T L H+ A+ L V ++ + ++S +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKMEKL 297
++ + +L ++ ++Y+ L ++ I++ P ++ AH+ V C + +++ L
Sbjct: 302 QLCVQKLRILIEDSDQNLKYLGLLAMSKILRTHPKSVQAHKDLVLQCLDDKDESIRLRAL 361
Query: 298 EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAV--RAIGRCA-IKLERAA--ERCISV 352
+++ + S +N+ +++ + + + + R + + I C+ + E IS+
Sbjct: 362 DLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHITNFEWYISI 421
Query: 353 LLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTL----DEPEAKA---- 404
L+EL +++ + D+ R +A + LD+ P+
Sbjct: 422 LVELTRLEGTRHGHLIAAQMLDVAIRVKAIRRFAVAQMSALLDSAHLVASSPQRSGICEV 481
Query: 405 --SMIWIIGEYAERI 417
+ WI GE++E +
Sbjct: 482 LYAAAWICGEFSEHL 496
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 621 IVPADQAAASPV 632
+ PAD+ AA PV
Sbjct: 949 VPPADEEAAEPV 960
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 503 EKPVISDDSNQLDPSLLDELLANIA-TLSS 531
EK V S D DP+LL LL + TL++
Sbjct: 1178 EKSV-SVDGKCSDPTLLSNLLEEMKETLAT 1206
>WB|WBGene00000158 [details] [associations]
symbol:apg-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF037094 SMART:SM00809 InterPro:IPR013041
InterPro:IPR008153 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0002119 GO:GO:0016192 GO:GO:0008565 GO:GO:0040011
GO:GO:0009306 GO:GO:0030131 SUPFAM:SSF49348 eggNOG:NOG303101
HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:DERSEVH HSSP:P17427 GO:GO:0001703 EMBL:AL132876
RefSeq:NP_740937.1 ProteinModelPortal:Q8WQB3 SMR:Q8WQB3
STRING:Q8WQB3 PaxDb:Q8WQB3 EnsemblMetazoa:Y105E8A.9 GeneID:173304
KEGG:cel:CELE_Y105E8A.9 UCSC:Y105E8A.9 CTD:173304
WormBase:Y105E8A.9 InParanoid:Q8WQB3 NextBio:879077 Uniprot:Q8WQB3
Length = 829
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/106 (21%), Positives = 53/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + ++ +L N+ D + LA+ T+G I ++ L +
Sbjct: 104 KRIGYLGAMLLLDERSEVHMLVTNSLKNDLTCSTQFVSGLALCTLGSICSAEMCRDLANE 163
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ +K ++ Y++K AA+C ++ EL+E F+ + L+ +
Sbjct: 164 VEKIIKQNNAYLKKKAALCAFRIVRKVPELMEV--FIPCTRSLLGE 207
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 75/366 (20%), Positives = 137/366 (37%)
Query: 178 QVFILDALSRYKAADAR---EAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV 234
QV IL L D R E +I+ +V + A + +L ME I S
Sbjct: 268 QVKILRLLRVLGKDDVRVTEEMNDILAQVATNTETAKNVGNAILYETVLTIME-IKSESG 326
Query: 235 VRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQ-RRPTILAHEIKVFFCKYNDPIYVK 293
+R L + LL+ + I+YVAL + V + H V C + I ++
Sbjct: 327 LRILAVNILGRF--LLNTDKNIRYVALNTLLKTVHVDYQAVQRHRNVVVECLKDPDISIR 384
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA---ERCI 350
+E+ L + NI + E + D +F + R I ER + E +
Sbjct: 385 KRAMELCFALMNRTNIAIMTKEVLIFLETADAEFKSECA---SRMYIATERYSPNHEWHL 441
Query: 351 SVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESL--DTLDEPEAKASMIW 408
++ ++++ YV E + + + ++ L + D ++ W
Sbjct: 442 DTMITVLRLAGKYVPDEVVSCMIQMISANEQLQSYAVSQLYHAAQKDAINAQPLLQVAFW 501
Query: 409 IIGEYAER------IDNADXXXXXXXXXXXXXXAQVQLQL------LTATVKLFLKKPTE 456
IGE+ + +D+ L +TA KL + +
Sbjct: 502 TIGEFGDLLLQPTDVDSTPISENDVVGVFESVLPSALTSLWTKCYGVTALAKLGTRFQST 561
Query: 457 GPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDS-NQLD 515
G + V +N A ++ + L+ R+ + +L+ +D +L PVI+ +S N
Sbjct: 562 GDRIGALVRMNQAHIQLE---LQQRSVEFNVILNLGD--LRDGLLERMPVITHNSLNAAA 616
Query: 516 PSLLDE 521
PS++DE
Sbjct: 617 PSMIDE 622
>ASPGD|ASPL0000017338 [details] [associations]
symbol:AN8291 species:162425 "Emericella nidulans"
[GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR017105
Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 EMBL:BN001302 OMA:ASQSFYK
EnsemblFungi:CADANIAT00004352 HOGENOM:HOG000179695 Uniprot:C8V3R4
Length = 934
Score = 132 (51.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 65/321 (20%), Positives = 129/321 (40%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
G D+S +V+ M + K++ YL + + + ++ +LA N KD N I
Sbjct: 18 GYDMSWASFNVLEVMSSSKFLQKRVGYLGALQSFRPETEVLMLATNLLKKDMVCSNLQII 77
Query: 64 ALAVRTMGCIRVDKIT-EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+L + T+ I + L D L R + P +RK A +C+ +L + E + R
Sbjct: 78 SLPLNTLPNIITPSLAMSLLPDVLSR-ISHSSPSIRKKAVVCLYRLALVYPEAL--RLAW 134
Query: 123 ESLKDLISDXXXXXXXXXXXXXXXXXXXSSRP--IFEITSHTLSKLLTALNECTEWGQVF 180
LKD + D RP + L+ N W +
Sbjct: 135 PRLKDRLMDETEDSSVTTAVLNVVCELGWRRPHDFLPLAPRFFELLVEGGNN---WMSIK 191
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVL-SAVKMILQQ--ME---LITSTDV 234
I+ + + R ++ + +Q +L + I+Q +E + +
Sbjct: 192 IIKLFATLTPLEPRLVRKLIRPLINIVQTTTAMSLLYECINGIIQGGILEGEGALEDSHE 251
Query: 235 VRNLC-KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILA-HEIKVFFCKYNDPIYV 292
+ +LC K+ +VT +P ++YVAL + IV P +++ H+ + C + I +
Sbjct: 252 IADLCVSKLRGMVVT--DFDPNLKYVALLAFSRIVVSHPHLISMHQDVIMNCLEDADISI 309
Query: 293 KMEKLEIMIKLASDRNIDQVL 313
+++ LE+ ++ + + V+
Sbjct: 310 RLQALELAARMVTGDTLQPVV 330
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 345 AAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
AA R I + + I ++V V EA + F + +S+ A + + + + P A
Sbjct: 438 AASR-IGLEMRNIAVRVKNVRMEATRAAE--FLLLVDNRQSVFANVSLAYNGVLGPLA-- 492
Query: 405 SMIWIIGEYAERIDN 419
W++GEYAE + +
Sbjct: 493 ---WVVGEYAEYLSS 504
Score = 40 (19.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAER 348
+E D + A++ I + +K++RA+ER
Sbjct: 844 SEDDAEMAT-AMKEIEKIRLKMQRASER 870
Score = 37 (18.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 515 DPSLLDELLA 524
DP +LDE LA
Sbjct: 695 DPDILDEALA 704
>UNIPROTKB|H3BR36 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 GO:GO:0005794 GO:GO:0048471
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0005802
PANTHER:PTHR22780:SF5 EMBL:AC009097 EMBL:AC010653 HGNC:HGNC:555
ChiTaRS:AP1G1 Ensembl:ENST00000563259 Bgee:H3BR36 Uniprot:H3BR36
Length = 187
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
>UNIPROTKB|F1RZ02 [details] [associations]
symbol:AP2A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR013038 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 OMA:PNKQAQM Gene3D:2.60.40.1030
GeneTree:ENSGT00550000074757 EMBL:CU928976
Ensembl:ENSSSCT00000014031 Uniprot:F1RZ02
Length = 836
Score = 101 (40.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ S +L L N D NP
Sbjct: 97 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAVKNDLASRNPTF 156
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA+ + + ++ E + + L D V+++AA+C+ +LY + +LV
Sbjct: 157 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGD 216
Query: 121 FLESLKDLISD 131
+ + L++D
Sbjct: 217 WTSRVVHLLND 227
Score = 73 (30.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 54/314 (17%), Positives = 118/314 (37%)
Query: 206 RLQHANC--AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRN 263
++QH+N A + A+ +++ + +++ C ++ L E ++Y+AL +
Sbjct: 328 KVQHSNAKNAALFEAISLVIHHD---SEPNLLVRACNQLGQ---FLQHRETNLRYLALES 381
Query: 264 INLIVQRR---PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
+ + + H E K + V+ ++++ + N Q++ E Y
Sbjct: 382 MCTLASSEFSHEAVKTHIETVTNALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSY 441
Query: 320 ATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRY 379
D + V + A K + +L LI++ ++V +E + I
Sbjct: 442 LETADYSIREEIVLKVAVLAEKYAVDYTWYVDTILGLIRVAGDFVSEEVWYRVIQIVVNR 501
Query: 380 PNTYESIIATLCESLDTLDEPEAKASMI----WIIGEYAERI--D-NADXXXXXXXXXXX 432
+ T+ E+L P +++ +++GE+ I D +
Sbjct: 502 DDAQGYAAKTVFEALQA---PACHENLVKVGGYVLGEFGNLIAGDPRSSPLIQFNLLHSK 558
Query: 433 XXXAQVQLQ-LLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLST 491
V + LL +T F+ E + V+ +++ + + +L+ RA Y RL +
Sbjct: 559 FHLCSVPTRALLLSTYIKFVNLFPEVKGTIQDVLRSDSQLRNADVELQQRAVEYLRLSTV 618
Query: 492 DPEAAKDVVLAEKP 505
VL E P
Sbjct: 619 ASTDILATVLEEMP 632
>UNIPROTKB|H3BUN9 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 PANTHER:PTHR22780:SF5 EMBL:AC009097
EMBL:AC010653 HGNC:HGNC:555 ChiTaRS:AP1G1 ProteinModelPortal:H3BUN9
SMR:H3BUN9 Ensembl:ENST00000565009 Bgee:H3BUN9 Uniprot:H3BUN9
Length = 208
Score = 114 (45.2 bits), Expect = 0.00041, P = 0.00041
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
>UNIPROTKB|H3BNR4 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 PANTHER:PTHR22780:SF5 EMBL:AC009097
EMBL:AC010653 HGNC:HGNC:555 ChiTaRS:AP1G1 ProteinModelPortal:H3BNR4
SMR:H3BNR4 Ensembl:ENST00000568327 Bgee:H3BNR4 Uniprot:H3BNR4
Length = 236
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K++ YL + + D+ +L N D ++ LA+ T+GC+ ++ L
Sbjct: 82 KRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGE 141
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISD 131
+++ LK + Y+RK AA+C + EL+E FL + K+L+++
Sbjct: 142 VEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPATKNLLNE 185
>UNIPROTKB|K7EMN7 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR026739 PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563
EMBL:AC015911 EMBL:AC004134 Ensembl:ENST00000587805 Uniprot:K7EMN7
Length = 181
Score = 104 (41.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 514 LDPSLLDELLANIATLSSVYHKPPEAFV 541
++P+LLDEL+ +I +L+SVYHKPP AFV
Sbjct: 3 IEPTLLDELICHIGSLASVYHKPPNAFV 30
Score = 42 (19.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 607 DLLGDLIGLD 616
DLLGDL+ LD
Sbjct: 74 DLLGDLLNLD 83
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 632 577 0.00081 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 212
No. of states in DFA: 619 (66 KB)
Total size of DFA: 291 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.99u 0.09s 46.08t Elapsed: 00:00:02
Total cpu time: 46.05u 0.09s 46.14t Elapsed: 00:00:03
Start: Fri May 10 10:00:39 2013 End: Fri May 10 10:00:42 2013
WARNINGS ISSUED: 1