Query 006764
Match_columns 632
No_of_seqs 309 out of 975
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 08:20:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006764.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006764hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 99.9 2.1E-27 7.1E-32 240.1 5.9 230 18-330 22-256 (256)
2 3i3n_A Kelch-like protein 11; 99.9 7.4E-27 2.5E-31 239.1 6.5 230 18-331 23-264 (279)
3 3htm_A Speckle-type POZ protei 99.8 7.8E-21 2.7E-25 179.7 12.7 127 16-160 23-149 (172)
4 2vkp_A BTB/POZ domain-containi 99.8 2.8E-21 9.7E-26 170.2 8.5 104 21-134 2-109 (109)
5 4eoz_A Speckle-type POZ protei 99.8 1.9E-21 6.5E-26 179.0 6.6 126 17-160 15-140 (145)
6 2if5_A Zinc finger and BTB dom 99.8 5.2E-21 1.8E-25 171.8 9.0 104 19-131 17-120 (120)
7 1r29_A B-cell lymphoma 6 prote 99.8 1.2E-20 4.2E-25 171.2 9.2 105 18-132 20-125 (127)
8 3b84_A Zinc finger and BTB dom 99.8 5E-21 1.7E-25 172.5 6.5 103 18-133 15-117 (119)
9 2z8h_A Transcription regulator 99.8 7.9E-21 2.7E-25 175.4 7.9 109 17-136 26-135 (138)
10 1buo_A POZ domain, protein (pr 99.8 1.4E-20 4.9E-25 169.7 9.1 102 18-133 19-120 (121)
11 2vpk_A Myoneurin; transcriptio 99.8 1.3E-20 4.4E-25 168.5 8.2 102 18-132 13-116 (116)
12 2yy9_A Zinc finger and BTB dom 99.8 7.6E-21 2.6E-25 175.2 5.3 106 17-135 15-120 (135)
13 2ppi_A Gigaxonin; BTB domain, 99.8 2.2E-20 7.4E-25 174.3 7.3 106 18-131 38-144 (144)
14 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.7E-20 5.8E-25 169.0 5.9 100 18-131 18-117 (119)
15 3ga1_A Nucleus accumbens-assoc 99.8 1.4E-20 4.7E-25 171.7 5.1 102 19-133 25-127 (129)
16 3ohu_A Transcription regulator 99.8 9.1E-21 3.1E-25 171.6 3.5 102 18-130 23-125 (125)
17 2ihc_A Transcription regulator 99.8 1.3E-20 4.4E-25 171.0 4.2 105 16-131 18-123 (124)
18 3m5b_A Zinc finger and BTB dom 99.8 5.8E-20 2E-24 166.5 5.7 94 21-132 24-117 (119)
19 3hqi_A Speckle-type POZ protei 99.8 1.4E-18 4.7E-23 180.1 11.2 134 19-170 166-302 (312)
20 3fkc_A Transcriptional regulat 99.7 3.8E-18 1.3E-22 153.4 7.2 90 18-115 22-112 (116)
21 2ast_A S-phase kinase-associat 99.4 3.7E-13 1.2E-17 127.9 7.2 97 30-136 3-128 (159)
22 4ajy_C Transcription elongatio 99.2 4.5E-11 1.5E-15 104.6 7.3 80 30-113 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 3.5E-10 1.2E-14 105.5 7.1 93 30-136 4-123 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 2.2E-10 7.6E-15 109.0 -0.6 94 30-136 6-127 (160)
25 1hv2_A Elongin C, ELC1; protei 98.3 1E-06 3.5E-11 77.4 5.9 80 29-113 5-99 (99)
26 3v7d_A Suppressor of kinetocho 98.2 1.5E-06 5E-11 83.5 7.4 98 29-135 8-134 (169)
27 2fnj_C Transcription elongatio 98.2 9E-07 3.1E-11 77.3 4.9 80 30-113 3-96 (96)
28 1vcb_B Protein (elongin C); tu 97.6 4.2E-05 1.4E-09 68.7 4.1 81 29-113 18-112 (112)
29 3drz_A BTB/POZ domain-containi 97.4 0.0005 1.7E-08 60.8 8.9 95 29-132 7-106 (107)
30 3drx_A BTB/POZ domain-containi 95.4 0.033 1.1E-06 54.8 7.7 96 29-133 13-113 (202)
31 3kvt_A Potassium channel prote 94.2 0.017 5.7E-07 51.9 2.1 83 30-115 7-91 (115)
32 2eqx_A Kelch repeat and BTB do 94.0 0.017 5.7E-07 50.5 1.5 37 217-256 46-82 (105)
33 1t1d_A Protein (potassium chan 92.3 0.2 7E-06 43.7 5.8 83 30-115 3-88 (100)
34 1s1g_A Potassium voltage-gated 92.1 0.13 4.5E-06 46.7 4.6 82 28-115 13-98 (124)
35 1nn7_A Potassium channel KV4.2 91.4 0.1 3.5E-06 45.9 2.9 80 30-115 2-85 (105)
36 2nz0_B Potassium voltage-gated 90.5 0.15 5.2E-06 47.2 3.3 83 27-115 34-120 (140)
37 3vmx_A Voltage-gated hydrogen 82.6 1.9 6.4E-05 32.9 4.7 35 539-573 4-38 (48)
38 2yy0_A C-MYC-binding protein; 75.4 3.4 0.00012 32.0 4.4 34 538-571 18-51 (53)
39 1deb_A APC protein, adenomatou 71.8 6.8 0.00023 30.0 5.1 37 536-572 14-50 (54)
40 3a2a_A Voltage-gated hydrogen 60.2 9.9 0.00034 29.6 4.1 35 540-574 12-46 (58)
41 1pd7_B MAD1; PAH2, SIN3, eukar 59.6 2.1 7.1E-05 28.4 0.2 16 99-114 3-18 (26)
42 2r9r_B Paddle chimera voltage 51.4 15 0.00052 40.5 5.5 84 29-115 53-139 (514)
43 1vjh_A BET V I allergen family 47.3 14 0.00048 32.7 3.6 33 411-454 90-122 (122)
44 3vp9_A General transcriptional 45.1 20 0.00067 30.9 4.0 26 546-571 50-75 (92)
45 1ci6_A Transcription factor AT 29.4 85 0.0029 24.7 5.2 33 538-570 29-61 (63)
46 2yy0_A C-MYC-binding protein; 29.3 38 0.0013 26.1 3.0 31 533-563 20-50 (53)
47 1dip_A Delta-sleep-inducing pe 28.7 45 0.0015 27.5 3.4 32 538-569 14-45 (78)
48 1e09_A PRU AV 1; allergen, maj 27.0 51 0.0017 30.2 4.0 36 412-455 122-157 (159)
49 3qh9_A Liprin-beta-2; coiled-c 24.0 98 0.0034 25.9 4.7 28 534-561 14-41 (81)
50 2xv5_A Lamin-A/C; structural p 21.5 1E+02 0.0035 25.3 4.3 29 544-572 3-31 (74)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.93 E-value=2.1e-27 Score=240.09 Aligned_cols=230 Identities=14% Similarity=0.100 Sum_probs=165.9
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhccccc-ccccceEEeCCCCCCHHHHHHHHHHhcCCCccc
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEK-AEEKCIINLLDIPGRAKTFELVAKFCYGVKLEL 96 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e-~~~~~~v~L~d~pgga~~felv~~FcYg~~i~i 96 (632)
-..++.++.+|||+|.|||+.|++||.+|+++|+||++||+.+..+ ++....|.|+++ .+++|+.+++|+|||++.+
T Consensus 22 l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v--~~~~f~~ll~~~Yt~~~~i 99 (256)
T 3hve_A 22 LSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGI--SVMVMREILDYIFSGQIRL 99 (256)
T ss_dssp HHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSC--CHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCC--CHHHHHHHHhhccCCCCcc
Confidence 4467899999999999999999999999999999999999876541 134578999999 4799999999999999999
Q ss_pred CcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhcchhhHHHHHhhhhhHHHHHHHhc---hhhHHHHHHHHHHc
Q 006764 97 TASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELN---ITKRCIESLAVKAS 173 (632)
Q Consensus 97 t~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~d~i~~L~sC~~L~~~Ae~~~---iv~rcidsLa~kac 173 (632)
+.+||..++.||.+|||++ |++.|+.||.+.+.+ .||..++.+|+.++ +.+.|.+-|+....
T Consensus 100 ~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~ 164 (256)
T 3hve_A 100 NEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCIAA---------ENCIGIRDFALHYCLHHVHYLATEYLETHFR 164 (256)
T ss_dssp C-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCCS---------STTHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhCCH---------hhHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 999999999998865 37777888888776 33444444433310
Q ss_pred CCCCCCCCCcccCCCCCCCCCCCccccCcccCCCCCCCCCCccccccccCChHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 006764 174 TDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPKNSTSDWWYEDVSTLSLPLYKRLIDVMESRGIRQEIIAGSLTFYA 253 (632)
Q Consensus 174 ~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~t~~~~~~~~~dWW~EDl~~Lsldlf~rvI~am~~~g~~~e~I~~aL~~Ya 253 (632)
.+ +-.+++..|+.+.+..+|++......+++.|+.+++.|+
T Consensus 165 ----~v-----------------------------------~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~ 205 (256)
T 3hve_A 165 ----DV-----------------------------------SSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWI 205 (256)
T ss_dssp ----HH-----------------------------------TTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTC
T ss_pred ----HH-----------------------------------hCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHH
Confidence 00 014688999999999999998888788999999999998
Q ss_pred HhhcCCCcccCCCCCCCcCCcCCCCCCCHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcCCC-HHHHHHHHH
Q 006764 254 KKYLPGLNRRQGDSSTRLAPVALGAPPSEEEQKLLLEEIDKLLPVQKGLVSAKFLFGLLRTAMILKAS-PSCISKLEK 330 (632)
Q Consensus 254 kk~lp~~~r~~~~~~~~~~~~~~~~~~~~~~qr~LLEtIv~lLP~~k~~vs~~fLf~LLR~A~~l~as-~~cr~~LE~ 330 (632)
++..+. | ...-..|++.|+. +.+|..||...+.....+..+ +.|+.-|++
T Consensus 206 ~~~~~~--R-------------------~~~~~~ll~~VRf------~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 206 AHDTEI--R-------------------KVHMKDVMSALWV------SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp CC--CC--S-------------------TTTHHHHHHHHHH------HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred HcCHHH--H-------------------HHHHHHHHHhCCC------CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 654321 1 1344679999985 357778999999988888888 689988875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.93 E-value=7.4e-27 Score=239.14 Aligned_cols=230 Identities=14% Similarity=0.190 Sum_probs=180.5
Q ss_pred hHHHhhcCCCeeEEEEEC---CeEEEeccccccccCHHHHHHhhcccccccccceEEeC------CCCCCHHHHHHHHHH
Q 006764 18 QAWFCTSGLPSDIVVEVG---EMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLL------DIPGRAKTFELVAKF 88 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~---~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~------d~pgga~~felv~~F 88 (632)
-..+|.+|.+|||+|.|| |+.|++||.+|+++|+||++||+++..| +....|.|+ ++ ++++|+.+++|
T Consensus 23 l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e-~~~~~i~l~~~~~~~~v--~~~~f~~ll~~ 99 (279)
T 3i3n_A 23 QNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSE-SRSGRVEMRKWSSEPGP--EPDTVEAVIEY 99 (279)
T ss_dssp HHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCS--CHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCcc-ccCCeEEeccccccCCC--CHHHHHHHHHh
Confidence 446899999999999998 9999999999999999999999987766 456789998 55 57999999999
Q ss_pred hcCCCcccCcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhcchhhHHHHHhhhhhHHHHHHHhch---hhHHH
Q 006764 89 CYGVKLELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELNI---TKRCI 165 (632)
Q Consensus 89 cYg~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~d~i~~L~sC~~L~~~Ae~~~i---v~rci 165 (632)
+|||++.++.+||..|+.||.+|+|++ |.+.|+.||.+.+.+ .||..++.+|+.+++ .+.|.
T Consensus 100 ~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~ 164 (279)
T 3i3n_A 100 MYTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLHL---------SNCVAIHSLAHMYTLSQLALKAA 164 (279)
T ss_dssp HHHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCCT---------TTHHHHHHHHHHTTCHHHHHHHH
T ss_pred hCcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCCc---------chHHHHHHHHHHcCcHHHHHHHH
Confidence 999999999999999999999999998 999999999998865 478888888888763 34444
Q ss_pred HHHHHHHcCCCCCCCCCcccCCCCCCCCCCCccccCcccCCCCCCCCCCccccccccCChHHHHHHHHHHHhcCCchHHH
Q 006764 166 ESLAVKASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPKNSTSDWWYEDVSTLSLPLYKRLIDVMESRGIRQEII 245 (632)
Q Consensus 166 dsLa~kac~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~t~~~~~~~~~dWW~EDl~~Lsldlf~rvI~am~~~g~~~e~I 245 (632)
+-|+... ..+ +-.+++..|+.+.+..+|++......+++.|
T Consensus 165 ~~i~~~f----~~v-----------------------------------~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~v 205 (279)
T 3i3n_A 165 DMIRRNF----HKV-----------------------------------IQDEEFYTLPFHLIRDWLSDLEITVDSEEVL 205 (279)
T ss_dssp HHHHHTH----HHH-----------------------------------TTSSGGGGSCHHHHHHHHTCSSCCCSCHHHH
T ss_pred HHHHHHH----HHH-----------------------------------hcCcChhcCCHHHHHHHhcCcCCCCCCHHHH
Confidence 4433221 100 0146889999999999999988888889999
Q ss_pred HHHHHHHHHhhcCCCcccCCCCCCCcCCcCCCCCCCHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcCCCHHHH
Q 006764 246 AGSLTFYAKKYLPGLNRRQGDSSTRLAPVALGAPPSEEEQKLLLEEIDKLLPVQKGLVSAKFLFGLLRTAMILKASPSCI 325 (632)
Q Consensus 246 ~~aL~~Yakk~lp~~~r~~~~~~~~~~~~~~~~~~~~~~qr~LLEtIv~lLP~~k~~vs~~fLf~LLR~A~~l~as~~cr 325 (632)
+.+++.|+++..+. |. ..-..|++.|+. +.+|..+|..+++....+..++.|+
T Consensus 206 f~av~~W~~~~~~~--r~-------------------~~~~~ll~~VRf------~l~~~~~L~~~v~~~~l~~~~~~c~ 258 (279)
T 3i3n_A 206 FETVLKWVQRNAEE--RE-------------------RYFEELFKLLRL------SQMKPTYLTRHVKPERLVANNEVCV 258 (279)
T ss_dssp HHHHHHHHHTTHHH--HT-------------------TTHHHHHTTSCG------GGSCHHHHHHTTTTSHHHHTCHHHH
T ss_pred HHHHHHHHHcCHHH--HH-------------------HHHHHHHHhcCC------CCCCHHHHHHHhhccchhcCCHHHH
Confidence 99999999764321 11 122446666552 4789999999999999999999999
Q ss_pred HHHHHH
Q 006764 326 SKLEKR 331 (632)
Q Consensus 326 ~~LE~r 331 (632)
..|..-
T Consensus 259 ~~l~ea 264 (279)
T 3i3n_A 259 KLVADA 264 (279)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877653
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.84 E-value=7.8e-21 Score=179.71 Aligned_cols=127 Identities=19% Similarity=0.177 Sum_probs=113.4
Q ss_pred hhhHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCcc
Q 006764 16 QGQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLE 95 (632)
Q Consensus 16 ~~~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~ 95 (632)
..-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ +....|.|+++ .+++|+.+++|+|++++.
T Consensus 23 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~--~~~~f~~~l~~~Yt~~~~ 99 (172)
T 3htm_A 23 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDV--EPEVFKEMMCFIYTGKAP 99 (172)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCG-GGTTEEEECSS--CHHHHHHHHHHHHHSCCT
T ss_pred HHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccc-cCCCeEEecCC--CHHHHHHHHHHHhCCCCC
Confidence 344467899999999999999999999999999999999999987665 45679999999 479999999999999999
Q ss_pred cCcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhcchhhHHHHHhhhhhHHHHHHHhch
Q 006764 96 LTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELNI 160 (632)
Q Consensus 96 it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~d~i~~L~sC~~L~~~Ae~~~i 160 (632)
++.+|+..|+.+|++|+|++ |.+.|+.||.+.+.. .+|..++.+|+.+++
T Consensus 100 ~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~~---------~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 100 NLDKMADDLLAAADKYALER------LKVMCEDALCSNLSV---------ENAAEILILADLHSA 149 (172)
T ss_dssp TGGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTCCT---------TTHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhCCH---------HHHHHHHHHHHHhCc
Confidence 99999999999999999998 999999999998754 477788888887763
No 4
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.84 E-value=2.8e-21 Score=170.23 Aligned_cols=104 Identities=20% Similarity=0.300 Sum_probs=92.4
Q ss_pred HhhcCCCeeEEEEECC----eEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCccc
Q 006764 21 FCTSGLPSDIVVEVGE----MSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLEL 96 (632)
Q Consensus 21 ~r~~g~~~DV~I~V~~----~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~i 96 (632)
++.++.+|||+|.|++ +.|++||.+|+++|+||++||.....| +. ..|.|+++ .+++|+.+++|+||+++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e-~~-~~i~l~~~--~~~~f~~~l~~iYt~~~~~ 77 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAE-VK-SEIHIPDV--EPAAFLILLKYMYSDEIDL 77 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEETTS--CHHHHHHHHHHHHHCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCccc-CC-CeEEeCCC--CHHHHHHHHHHHcCCCccC
Confidence 4678999999999988 999999999999999999999987765 34 78999998 4799999999999999999
Q ss_pred CcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhh
Q 006764 97 TASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVV 134 (632)
Q Consensus 97 t~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v 134 (632)
+++||..|+.+|++++|++ |.+.|++||.+.+
T Consensus 78 ~~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 78 EADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 9999999999999999998 9999999998753
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.83 E-value=1.9e-21 Score=179.01 Aligned_cols=126 Identities=19% Similarity=0.176 Sum_probs=95.7
Q ss_pred hhHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCccc
Q 006764 17 GQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLEL 96 (632)
Q Consensus 17 ~~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~i 96 (632)
.-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ +....|.|+++ .+++|+.+++|+||+++.+
T Consensus 15 ~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~--~~~~~~~~l~~~Y~~~~~~ 91 (145)
T 4eoz_A 15 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDV--EPEVFKEMMCFIYTGKAPN 91 (145)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHH-HHHTEEEECSS--CHHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcC-CCCceEEecCC--CHHHHHHHHHhhccCccCC
Confidence 33467889999999999999999999999999999999999987655 34578999998 4799999999999999999
Q ss_pred CcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhcchhhHHHHHhhhhhHHHHHHHhch
Q 006764 97 TASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELNI 160 (632)
Q Consensus 97 t~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~d~i~~L~sC~~L~~~Ae~~~i 160 (632)
+.+|+..|+.+|++++|++ |.+.|+.||.+.+.. .||..++.+|+.+++
T Consensus 92 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~~---------~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 92 LDKMADDLLAAADKYALER------LKVMCEDALCSNLSV---------ENAAEILILADLHSA 140 (145)
T ss_dssp GGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred cHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhCCH---------HHHHHHHHHHHHhCH
Confidence 9999999999999999998 999999999998744 588888888888764
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.83 E-value=5.2e-21 Score=171.76 Aligned_cols=104 Identities=21% Similarity=0.283 Sum_probs=93.3
Q ss_pred HHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCc
Q 006764 19 AWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTA 98 (632)
Q Consensus 19 ~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~ 98 (632)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+...+ +....|.|+++ .+++|+.+++|+||+++.++.
T Consensus 17 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~--~~~~f~~ll~~~Yt~~~~~~~ 93 (120)
T 2if5_A 17 NEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVV-DQQNVYEIDFV--SAEALTALMDFAYTATLTVST 93 (120)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECCSS--CHHHHHHHHHHHHHSCCCCCG
T ss_pred HHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccc-cCCceEEeCCC--CHHHHHHHHHHHcCCCCccCH
Confidence 357889999999999999999999999999999999999987655 45678999998 479999999999999999999
Q ss_pred chHhHHHHhhcccccCcccCcccHHHHHHHHHH
Q 006764 99 SNVVYLRCAAEHLEMTEEYGDGNLITQTETFLN 131 (632)
Q Consensus 99 ~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~ 131 (632)
+|+..|+.||++|+|++ |++.|++||.
T Consensus 94 ~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 94 ANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp GGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 99999999999999999 9999999983
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.82 E-value=1.2e-20 Score=171.16 Aligned_cols=105 Identities=22% Similarity=0.421 Sum_probs=97.0
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEe-CCCCCCHHHHHHHHHHhcCCCccc
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINL-LDIPGRAKTFELVAKFCYGVKLEL 96 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L-~d~pgga~~felv~~FcYg~~i~i 96 (632)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....| ....|.| +++ .+++|+.+++|+|++++.+
T Consensus 20 l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e--~~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~ 95 (127)
T 1r29_A 20 LNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR--NLSVINLDPEI--NPEGFNILLDFMYTSRLNL 95 (127)
T ss_dssp HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT--TCSEEECCTTS--CHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC--CCCEEEeCCCC--CHHHHHHHHHHHcCCCcCc
Confidence 3457899999999999999999999999999999999999987654 4578999 888 4799999999999999999
Q ss_pred CcchHhHHHHhhcccccCcccCcccHHHHHHHHHHH
Q 006764 97 TASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQ 132 (632)
Q Consensus 97 t~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~ 132 (632)
+.+|+..|+.||++|+|++ |.+.|+.||.+
T Consensus 96 ~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 96 REGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 9999999999999999998 99999999975
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.82 E-value=5e-21 Score=172.46 Aligned_cols=103 Identities=24% Similarity=0.233 Sum_probs=93.2
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCcccC
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELT 97 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it 97 (632)
-..++.+|.+|||+|.|||++|++||.+|+++|+||++||..+. ...|.|++++ +++|+.+++|+|||++.++
T Consensus 15 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~ 87 (119)
T 3b84_A 15 LNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLPAGF--AEIFGLLLDFFYTGHLALT 87 (119)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEECGGG--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeCCCC--HHHHHHHHHHHcCCCCccC
Confidence 34578999999999999999999999999999999999998754 2579999985 7999999999999999999
Q ss_pred cchHhHHHHhhcccccCcccCcccHHHHHHHHHHHh
Q 006764 98 ASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQV 133 (632)
Q Consensus 98 ~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 133 (632)
.+||..|+.||++|+|++ |.+.|++||.+.
T Consensus 88 ~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 88 SGNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 999999999999999998 999999999763
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.82 E-value=7.9e-21 Score=175.41 Aligned_cols=109 Identities=22% Similarity=0.248 Sum_probs=99.0
Q ss_pred hhHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeC-CCCCCHHHHHHHHHHhcCCCcc
Q 006764 17 GQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLL-DIPGRAKTFELVAKFCYGVKLE 95 (632)
Q Consensus 17 ~~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~-d~pgga~~felv~~FcYg~~i~ 95 (632)
+-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ ...|.|+ ++ .+++|+.+++|+||+++.
T Consensus 26 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~v--~~~~~~~lL~~~Ytg~~~ 100 (138)
T 2z8h_A 26 SLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA---ELTVTLPEEV--TVKGFEPLIQFAYTAKLI 100 (138)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT---TEEEECCTTS--CHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC---CceEEeCCCC--CHHHHHHHHHHhcCCCcc
Confidence 34467899999999999999999999999999999999999986653 3578885 78 479999999999999999
Q ss_pred cCcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhc
Q 006764 96 LTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLR 136 (632)
Q Consensus 96 it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~ 136 (632)
++.+||..|+.||++|||++ |++.|++||.+.+..
T Consensus 101 i~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~ 135 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLD 135 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSC
T ss_pred cCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhccc
Confidence 99999999999999999999 999999999987754
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.82 E-value=1.4e-20 Score=169.74 Aligned_cols=102 Identities=26% Similarity=0.310 Sum_probs=94.5
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCcccC
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELT 97 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it 97 (632)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.++ ...|.|++++ +++|+.+++|+||+++.++
T Consensus 19 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~ 90 (121)
T 1buo_A 19 ANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN------SQHYTLDFLS--PKTFQQILEYAYTATLQAK 90 (121)
T ss_dssp HHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC------CcEEEeCCCC--HHHHHHHHHhhcCCCcCCC
Confidence 3457899999999999999999999999999999999999753 2579999995 7999999999999999999
Q ss_pred cchHhHHHHhhcccccCcccCcccHHHHHHHHHHHh
Q 006764 98 ASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQV 133 (632)
Q Consensus 98 ~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 133 (632)
++|+..|+.||++|+|++ |.+.|++||.+.
T Consensus 91 ~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 91 AEDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp GGGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 999999999999999998 999999999874
No 11
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.82 E-value=1.3e-20 Score=168.46 Aligned_cols=102 Identities=24% Similarity=0.303 Sum_probs=92.5
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeC--CCCCCHHHHHHHHHHhcCCCcc
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLL--DIPGRAKTFELVAKFCYGVKLE 95 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~--d~pgga~~felv~~FcYg~~i~ 95 (632)
-..++.++.+|||+|.|||+.|++||.+|+++|+||++||.... ...|.|+ ++ .+++|+.+++|+||+++.
T Consensus 13 l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~ 85 (116)
T 2vpk_A 13 LNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-----ENNVFLDQSQV--KADGFQKLLEFIYTGTLN 85 (116)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-----CSCEECCTTTC--CHHHHHHHHHHHHHSCCC
T ss_pred HHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-----CCeEEeecCCC--CHHHHHHHHHHHcCCCcc
Confidence 34678999999999999999999999999999999999998752 2467777 88 479999999999999999
Q ss_pred cCcchHhHHHHhhcccccCcccCcccHHHHHHHHHHH
Q 006764 96 LTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQ 132 (632)
Q Consensus 96 it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~ 132 (632)
++++||..|+.||++|+|++ |++.|++||.+
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 99999999999999999998 99999999853
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.81 E-value=7.6e-21 Score=175.25 Aligned_cols=106 Identities=24% Similarity=0.244 Sum_probs=92.7
Q ss_pred hhHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCccc
Q 006764 17 GQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLEL 96 (632)
Q Consensus 17 ~~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~i 96 (632)
+-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ...|.|++++ +++|+.+++|+|++++.+
T Consensus 15 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i 87 (135)
T 2yy9_A 15 ELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLPAGF--AEIFGLLLDFFYTGHLAL 87 (135)
T ss_dssp HHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGG--HHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeCCCC--HHHHHHHHHHHhCCCCCC
Confidence 344688999999999999999999999999999999999998754 2579999985 799999999999999999
Q ss_pred CcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhh
Q 006764 97 TASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVL 135 (632)
Q Consensus 97 t~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~ 135 (632)
+.+||..|+.||++|+|++ |++.|++||.+.+.
T Consensus 88 ~~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 88 TSGNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 9999999999999999998 99999999988763
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.81 E-value=2.2e-20 Score=174.34 Aligned_cols=106 Identities=17% Similarity=0.153 Sum_probs=92.0
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhccccc-ccccceEEeCCCCCCHHHHHHHHHHhcCCCccc
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEK-AEEKCIINLLDIPGRAKTFELVAKFCYGVKLEL 96 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e-~~~~~~v~L~d~pgga~~felv~~FcYg~~i~i 96 (632)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ ++....|.|++++ +++|+.+++|+|++++.+
T Consensus 38 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i 115 (144)
T 2ppi_A 38 LSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRL 115 (144)
T ss_dssp HHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCC
T ss_pred HHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCC
Confidence 3457889999999999999999999999999999999999875432 1345689999985 799999999999999999
Q ss_pred CcchHhHHHHhhcccccCcccCcccHHHHHHHHHH
Q 006764 97 TASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLN 131 (632)
Q Consensus 97 t~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~ 131 (632)
+.+||..|+.||++|+|++ |++.|++||.
T Consensus 116 ~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 116 NEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 9999999999999999998 9999999974
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.80 E-value=1.7e-20 Score=168.96 Aligned_cols=100 Identities=25% Similarity=0.269 Sum_probs=91.3
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCcccC
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELT 97 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it 97 (632)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.. ..|.|+++ .+++|+.+++|+||+++.++
T Consensus 18 l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~------~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~ 89 (119)
T 2q81_A 18 LNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK------DVVHLDIS--NAAGLGQVLEFMYTAKLSLS 89 (119)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------SGGGGGGC--CHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCCC------CEEEeCCC--CHHHHHHHHHHHcCCCCccC
Confidence 34678999999999999999999999999999999999998632 35677777 47999999999999999999
Q ss_pred cchHhHHHHhhcccccCcccCcccHHHHHHHHHH
Q 006764 98 ASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLN 131 (632)
Q Consensus 98 ~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~ 131 (632)
.+||..|+.||++|+|++ |++.|++||.
T Consensus 90 ~~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 90 PENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 999999999999999998 9999999985
No 15
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.80 E-value=1.4e-20 Score=171.71 Aligned_cols=102 Identities=22% Similarity=0.385 Sum_probs=87.3
Q ss_pred HHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeC-CCCCCHHHHHHHHHHhcCCCcccC
Q 006764 19 AWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLL-DIPGRAKTFELVAKFCYGVKLELT 97 (632)
Q Consensus 19 ~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~-d~pgga~~felv~~FcYg~~i~it 97 (632)
..++.++.+|||+|.|||+.|++||.+|+++|+||++||... ....|.|+ +++ +++|+.+++|+|++++.++
T Consensus 25 ~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~ 97 (129)
T 3ga1_A 25 NEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMN 97 (129)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCC--HHHHHHHHHHHHHSEEECC
T ss_pred HHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCC--HHHHHHHHHHHhCCccccC
Confidence 356889999999999999999999999999999999999875 23689996 884 7999999999999999999
Q ss_pred cchHhHHHHhhcccccCcccCcccHHHHHHHHHHHh
Q 006764 98 ASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQV 133 (632)
Q Consensus 98 ~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 133 (632)
.+||..|+.||++|||++ |++.|++||.+.
T Consensus 98 ~~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 98 VGDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp TTTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 999999999999999999 999999999875
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.80 E-value=9.1e-21 Score=171.59 Aligned_cols=102 Identities=22% Similarity=0.278 Sum_probs=93.1
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCC-CCCCHHHHHHHHHHhcCCCccc
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLD-IPGRAKTFELVAKFCYGVKLEL 96 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d-~pgga~~felv~~FcYg~~i~i 96 (632)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ ...|.|++ + .+++|+.+++|+||+++.+
T Consensus 23 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~~--~~~~f~~~l~~iYtg~~~~ 97 (125)
T 3ohu_A 23 LNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN---DLVVSLPEEV--TARGFGPLLQFAYTAKLLL 97 (125)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS---SCEEECCTTC--CHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC---CcEEEeCCCC--CHHHHHHHHHhHcCCceEE
Confidence 3467899999999999999999999999999999999999876543 46899987 8 4799999999999999999
Q ss_pred CcchHhHHHHhhcccccCcccCcccHHHHHHHHH
Q 006764 97 TASNVVYLRCAAEHLEMTEEYGDGNLITQTETFL 130 (632)
Q Consensus 97 t~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL 130 (632)
+.+||..|+.||++|+|++ |.+.|++||
T Consensus 98 ~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 98 SRENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp CTTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 9999999999999999998 999888775
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.80 E-value=1.3e-20 Score=170.97 Aligned_cols=105 Identities=22% Similarity=0.239 Sum_probs=93.0
Q ss_pred hhhHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeC-CCCCCHHHHHHHHHHhcCCCc
Q 006764 16 QGQAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLL-DIPGRAKTFELVAKFCYGVKL 94 (632)
Q Consensus 16 ~~~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~-d~pgga~~felv~~FcYg~~i 94 (632)
++-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+...+ ...|.++ ++ .+++|+.+++|+||+++
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e---~~~i~l~~~v--~~~~f~~lL~~iYtg~~ 92 (124)
T 2ihc_A 18 LSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG---ELNITLPEEV--TVKGFEPLIQFAYTAKL 92 (124)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTS--CHHHHHHHHHHHHHSEE
T ss_pred HHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC---CceEeecCCc--CHHHHHHHHHHhcCCCc
Confidence 344568899999999999999999999999999999999999987654 3578884 78 57999999999999999
Q ss_pred ccCcchHhHHHHhhcccccCcccCcccHHHHHHHHHH
Q 006764 95 ELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLN 131 (632)
Q Consensus 95 ~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~ 131 (632)
.++.+||..|+.||++|||++ |++.|++||.
T Consensus 93 ~i~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 93 ILSKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp EEETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred ccCHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 999999999999999999998 9999999875
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.79 E-value=5.8e-20 Score=166.55 Aligned_cols=94 Identities=22% Similarity=0.204 Sum_probs=85.6
Q ss_pred HhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCcch
Q 006764 21 FCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTASN 100 (632)
Q Consensus 21 ~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~~N 100 (632)
.|.++.+|||+|.|||+.|++||.+|+++|+||++ . ...|.|++++ +++|+.+++|+|||++.|+.+|
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~-----~-----~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~ 91 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR-----R-----GQWALGEGIS--PSTFAQLLNFVYGESVELQPGE 91 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC-----C-----EEEECCSSCC--HHHHHHHHHHHTTCCEEECGGG
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc-----C-----CCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHH
Confidence 47889999999999999999999999999999984 1 2478999994 7999999999999999999999
Q ss_pred HhHHHHhhcccccCcccCcccHHHHHHHHHHH
Q 006764 101 VVYLRCAAEHLEMTEEYGDGNLITQTETFLNQ 132 (632)
Q Consensus 101 V~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~ 132 (632)
|..|+.||++|||+. |++.|++++.+
T Consensus 92 v~~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 92 LRPLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 999999999999998 99999999875
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.76 E-value=1.4e-18 Score=180.11 Aligned_cols=134 Identities=18% Similarity=0.197 Sum_probs=114.1
Q ss_pred HHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCc
Q 006764 19 AWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTA 98 (632)
Q Consensus 19 ~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~ 98 (632)
..++.++.+|||+|.|+|++|++||.+|+++|+||++||...+.| +...+|.|+++ .+++|+.+++|+||+++.++.
T Consensus 166 ~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~--~~~~f~~~L~~iYt~~~~~~~ 242 (312)
T 3hqi_A 166 GGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDV--EPEVFKEMMCFIYTGKAPNLD 242 (312)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEECSS--CHHHHHHHHHHHHHSCCTTHH
T ss_pred HHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccc-cCCceEEecCC--CHHHHHHHHHhhcCCCCCChH
Confidence 346788999999999999999999999999999999999987665 45679999999 579999999999999999999
Q ss_pred chHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhcchhhHHHHHhhhhhHHHHHHHhc---hhhHHHHHHHH
Q 006764 99 SNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLRNWKDSLKALQTCDDILPYAEELN---ITKRCIESLAV 170 (632)
Q Consensus 99 ~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~d~i~~L~sC~~L~~~Ae~~~---iv~rcidsLa~ 170 (632)
.|+..|+.||++++|+. |...|+.||.+.+.. .+|..++.+|+.++ +.+.|++-|+.
T Consensus 243 ~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 243 KMADDLLAAADKYALER------LKVMCEDALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp HHHHHHHHHHHHTTCHH------HHHHHHHHHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHH------HHHHHHHHHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999998 999999999988754 47788888888774 55556655554
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.72 E-value=3.8e-18 Score=153.38 Aligned_cols=90 Identities=22% Similarity=0.216 Sum_probs=82.9
Q ss_pred hHHHhhcCCCeeEEEEECCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCc-cc
Q 006764 18 QAWFCTSGLPSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKL-EL 96 (632)
Q Consensus 18 ~~w~r~~g~~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i-~i 96 (632)
-..++.++.+|||+|.|||+.|++||.+|+++|+||++||..+ ...|.|++++ +++|+.+++|+|||++ .+
T Consensus 22 l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~ 93 (116)
T 3fkc_A 22 LNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA------GQVVELSFIR--AEIFAEILNYIYSSKIVRV 93 (116)
T ss_dssp HHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSC--HHHHHHHHHHHTTSCCCSC
T ss_pred HHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCC--HHHHHHHHHhhcCCCcCCC
Confidence 3457889999999999999999999999999999999999864 2579999994 7999999999999999 79
Q ss_pred CcchHhHHHHhhcccccCc
Q 006764 97 TASNVVYLRCAAEHLEMTE 115 (632)
Q Consensus 97 t~~NV~~L~cAA~~LqM~e 115 (632)
+.+|+..++.||++|||+.
T Consensus 94 ~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 94 RSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp CHHHHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHHhCccc
Confidence 9999999999999999986
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.38 E-value=3.7e-13 Score=127.92 Aligned_cols=97 Identities=15% Similarity=0.230 Sum_probs=83.8
Q ss_pred EEEEE-CCeEEEeccccccccCHHHHHHhhc-ccc-cccccceEEeCCCCCCHHHHHHHHHHhcCCC-------------
Q 006764 30 IVVEV-GEMSFHLHKFPLLSRSGAMERLIAE-ASE-KAEEKCIINLLDIPGRAKTFELVAKFCYGVK------------- 93 (632)
Q Consensus 30 V~I~V-~~~~F~lHK~vLas~S~yfr~Lf~~-~~~-e~~~~~~v~L~d~pgga~~felv~~FcYg~~------------- 93 (632)
|+|+. +|+.|.+||.+ |+.|+||+.||.. +.. + +....|.|++|+ +.+++.|++|||..+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e-~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~ 78 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDE-GDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKE 78 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS-------CEECTTSC--HHHHHHHHHHHHHTTTCCC---------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCccc-ccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccc
Confidence 77875 89999999998 8999999999987 433 3 345689999996 599999999999877
Q ss_pred -------------cccCcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhc
Q 006764 94 -------------LELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLR 136 (632)
Q Consensus 94 -------------i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~ 136 (632)
+.++..|+..|+.||.||+|.. |++.|+.|+...+..
T Consensus 79 ~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~g 128 (159)
T 2ast_A 79 KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIKG 128 (159)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHSS
T ss_pred cchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHcC
Confidence 8999999999999999999998 999999999998854
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.16 E-value=4.5e-11 Score=104.57 Aligned_cols=80 Identities=15% Similarity=0.245 Sum_probs=65.7
Q ss_pred EEEEE-CCeEEEeccccccccCHHHHHHhhc--ccccccccceEEeCCCCCCHHHHHHHHHHhc-----C---CCcc---
Q 006764 30 IVVEV-GEMSFHLHKFPLLSRSGAMERLIAE--ASEKAEEKCIINLLDIPGRAKTFELVAKFCY-----G---VKLE--- 95 (632)
Q Consensus 30 V~I~V-~~~~F~lHK~vLas~S~yfr~Lf~~--~~~e~~~~~~v~L~d~pgga~~felv~~FcY-----g---~~i~--- 95 (632)
|+|+- ||+.|.+||.+ |+.|+||+.||.. ...| +....|.|++++ +.+++.+++||| + +.|.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E-~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~ 79 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 79 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccc-cCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCc
Confidence 55655 89999999999 9999999999986 3333 345689999995 699999999999 5 6787
Q ss_pred cCcchHhHHHHhhccccc
Q 006764 96 LTASNVVYLRCAAEHLEM 113 (632)
Q Consensus 96 it~~NV~~L~cAA~~LqM 113 (632)
|+++|+..|+.||.||+.
T Consensus 80 i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 80 IAPEIALELLMAANFLDC 97 (97)
T ss_dssp CCGGGHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHhhhCC
Confidence 999999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.01 E-value=3.5e-10 Score=105.50 Aligned_cols=93 Identities=16% Similarity=0.213 Sum_probs=82.2
Q ss_pred EEEEE-CCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCC---------------
Q 006764 30 IVVEV-GEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVK--------------- 93 (632)
Q Consensus 30 V~I~V-~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~--------------- 93 (632)
|+|+. +|+.|.+|+.+ |..|+||+.||.... ...|.|++|+ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-----MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-----CSSEECTTCC--HHHHHHHHHHHHHHTTCC------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-----CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccc
Confidence 67777 89999999998 899999999997632 2479999996 599999999999654
Q ss_pred -----------cccCcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhc
Q 006764 94 -----------LELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLR 136 (632)
Q Consensus 94 -----------i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~ 136 (632)
+.++..++..|+.||.||++.. |++.|+.|+...+..
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ikg 123 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIKG 123 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHcC
Confidence 7899999999999999999998 999999999998753
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.85 E-value=2.2e-10 Score=108.98 Aligned_cols=94 Identities=16% Similarity=0.252 Sum_probs=52.3
Q ss_pred EEEEE-CCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCC---------------
Q 006764 30 IVVEV-GEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVK--------------- 93 (632)
Q Consensus 30 V~I~V-~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~--------------- 93 (632)
|+|+. +|+.|.+|+.+ |..|+||+.||..... ...|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 78 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV----DNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAAT 78 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC----------------CCTTSC--HHHHHHHHHC--------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC----CCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccc
Confidence 66765 89999999998 8999999999986432 2478999996 599999999999765
Q ss_pred ------------cccCcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhhc
Q 006764 94 ------------LELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVLR 136 (632)
Q Consensus 94 ------------i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~ 136 (632)
+.++..++..|+.||.||+|.. |++.|+.|+...+..
T Consensus 79 ~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ikg 127 (160)
T 2p1m_A 79 SDDDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMIKG 127 (160)
T ss_dssp ----------------------CHHHHHHTTCHH------HHHHHHHHHHHTTTT
T ss_pred ccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHcC
Confidence 5789999999999999999998 999999999998743
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.25 E-value=1e-06 Score=77.40 Aligned_cols=80 Identities=15% Similarity=0.174 Sum_probs=66.5
Q ss_pred eEEEEE-CCeEEEeccccccccCHHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCC--------------
Q 006764 29 DIVVEV-GEMSFHLHKFPLLSRSGAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVK-------------- 93 (632)
Q Consensus 29 DV~I~V-~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~-------------- 93 (632)
-|+|+- +|+.|.+|+.+ |..|++|+.|+..+. + .....|.|++++ +.+++.|++|||.-+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e-~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R-ESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPE 79 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T-TCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c-cCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCC
Confidence 367777 99999999996 899999999998743 2 234689999996 599999999999432
Q ss_pred cccCcchHhHHHHhhccccc
Q 006764 94 LELTASNVVYLRCAAEHLEM 113 (632)
Q Consensus 94 i~it~~NV~~L~cAA~~LqM 113 (632)
..+....+..|+.||.||++
T Consensus 80 w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 FEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHCC
T ss_pred ccCCHHHHHHHHHHHHHhCc
Confidence 36788899999999999985
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.25 E-value=1.5e-06 Score=83.49 Aligned_cols=98 Identities=11% Similarity=0.221 Sum_probs=77.9
Q ss_pred eEEEEE-CCeEEEeccccccccCHHHHHHhhcccccc---cccceEEeCCCCCCHHHHHHHHHHhcCCC-----------
Q 006764 29 DIVVEV-GEMSFHLHKFPLLSRSGAMERLIAEASEKA---EEKCIINLLDIPGRAKTFELVAKFCYGVK----------- 93 (632)
Q Consensus 29 DV~I~V-~~~~F~lHK~vLas~S~yfr~Lf~~~~~e~---~~~~~v~L~d~pgga~~felv~~FcYg~~----------- 93 (632)
-|+|+- +|+.|.+++.+ |..|++++.|+.....++ .....|.|++|+ +.+++.|++|||.-+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 467766 89999999997 788999999998643210 122579999996 599999999999322
Q ss_pred --------------cccCcchHhHHHHhhcccccCcccCcccHHHHHHHHHHHhhh
Q 006764 94 --------------LELTASNVVYLRCAAEHLEMTEEYGDGNLITQTETFLNQVVL 135 (632)
Q Consensus 94 --------------i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~ 135 (632)
+.+....+..|+.||.||+|.. |++.|+.++...+.
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~ik 134 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMIR 134 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHT
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHHc
Confidence 4577888999999999999998 99999999988763
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.22 E-value=9e-07 Score=77.25 Aligned_cols=80 Identities=15% Similarity=0.225 Sum_probs=63.9
Q ss_pred EEEEE-CCeEEEeccccccccCHHHHHHhhcc-c-ccccccceEEeCCCCCCHHHHHHHHHHhcCCC-----------cc
Q 006764 30 IVVEV-GEMSFHLHKFPLLSRSGAMERLIAEA-S-EKAEEKCIINLLDIPGRAKTFELVAKFCYGVK-----------LE 95 (632)
Q Consensus 30 V~I~V-~~~~F~lHK~vLas~S~yfr~Lf~~~-~-~e~~~~~~v~L~d~pgga~~felv~~FcYg~~-----------i~ 95 (632)
|+|+- +|+.|.+|+.+ |..|++|+.|+... . .| +....|.|++|+ +.+++.|++|||.-+ ..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e-~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCccc-ccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcc
Confidence 56666 89999999996 89999999999863 2 22 234589999996 599999999999422 36
Q ss_pred cCcchHhHHHHhhccccc
Q 006764 96 LTASNVVYLRCAAEHLEM 113 (632)
Q Consensus 96 it~~NV~~L~cAA~~LqM 113 (632)
+....+..|+.||.||++
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 888999999999999985
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.58 E-value=4.2e-05 Score=68.67 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=62.9
Q ss_pred eEEEEE-CCeEEEeccccccccCHHHHHHhhccc--ccccccceEEeCCCCCCHHHHHHHHHHhcCCC-----------c
Q 006764 29 DIVVEV-GEMSFHLHKFPLLSRSGAMERLIAEAS--EKAEEKCIINLLDIPGRAKTFELVAKFCYGVK-----------L 94 (632)
Q Consensus 29 DV~I~V-~~~~F~lHK~vLas~S~yfr~Lf~~~~--~e~~~~~~v~L~d~pgga~~felv~~FcYg~~-----------i 94 (632)
-|+|+- +|+.|.+++. .|..|+.++.|+.... .+ .....|.|++|+ +.+++.|++|||--+ .
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e-~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w 93 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEF 93 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC---------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCccc-ccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCc
Confidence 356663 8999999999 5789999999997532 22 223579999996 599999999998322 3
Q ss_pred ccCcchHhHHHHhhccccc
Q 006764 95 ELTASNVVYLRCAAEHLEM 113 (632)
Q Consensus 95 ~it~~NV~~L~cAA~~LqM 113 (632)
.+....+..|+.||.||++
T Consensus 94 ~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCCHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHHhCc
Confidence 6888999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.42 E-value=0.0005 Score=60.84 Aligned_cols=95 Identities=18% Similarity=0.153 Sum_probs=72.5
Q ss_pred eEEEEECCeEEEeccccccccC-HHHHHHhhcccc---cccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCc-chHhH
Q 006764 29 DIVVEVGEMSFHLHKFPLLSRS-GAMERLIAEASE---KAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTA-SNVVY 103 (632)
Q Consensus 29 DV~I~V~~~~F~lHK~vLas~S-~yfr~Lf~~~~~---e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~-~NV~~ 103 (632)
=|+|.|||+.|...+..|.... .+|.+||..... ......++-| |- .|+.|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4788999999999999999886 578999875311 0012234554 33 579999999999999988743 23567
Q ss_pred HHHhhcccccCcccCcccHHHHHHHHHHH
Q 006764 104 LRCAAEHLEMTEEYGDGNLITQTETFLNQ 132 (632)
Q Consensus 104 L~cAA~~LqM~e~~~~~NL~~~ce~FL~~ 132 (632)
++..|+|.++++ |++.|+.-+.+
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHhc
Confidence 999999999999 99999876543
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.38 E-value=0.033 Score=54.78 Aligned_cols=96 Identities=17% Similarity=0.114 Sum_probs=71.9
Q ss_pred eEEEEECCeEEEeccccccccC-HHHHHHhhcccc---cccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCc-chHhH
Q 006764 29 DIVVEVGEMSFHLHKFPLLSRS-GAMERLIAEASE---KAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTA-SNVVY 103 (632)
Q Consensus 29 DV~I~V~~~~F~lHK~vLas~S-~yfr~Lf~~~~~---e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~-~NV~~ 103 (632)
=|+|.|||+.|..-+..|.... .+|.+||..... .......+-|. - .|..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFID-R--DP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID-R--DPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEEC-S--CSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEec-C--ChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 3678999999999999998775 488999864311 00112345543 2 458999999999999998743 23466
Q ss_pred HHHhhcccccCcccCcccHHHHHHHHHHHh
Q 006764 104 LRCAAEHLEMTEEYGDGNLITQTETFLNQV 133 (632)
Q Consensus 104 L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 133 (632)
++.-|+|+++++ |++.|..-+.+.
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHHH
Confidence 999999999998 999999888653
No 31
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.24 E-value=0.017 Score=51.94 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=61.0
Q ss_pred EEEEECCeEEEeccccccccC-HHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCc-chHhHHHHh
Q 006764 30 IVVEVGEMSFHLHKFPLLSRS-GAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTA-SNVVYLRCA 107 (632)
Q Consensus 30 V~I~V~~~~F~lHK~vLas~S-~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~-~NV~~L~cA 107 (632)
|+|.|||+.|...+..|.... ..|.+||.....-+.....+-|. = .|..|+.|++|.-+|++.+.. ..+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD-R--dp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD-R--HPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC-S--CTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe-c--ChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 788999999999999888763 34566765421110123455553 2 458999999999999987754 356789999
Q ss_pred hcccccCc
Q 006764 108 AEHLEMTE 115 (632)
Q Consensus 108 A~~LqM~e 115 (632)
|+|.++++
T Consensus 84 a~fy~i~~ 91 (115)
T 3kvt_A 84 LEFWGLDS 91 (115)
T ss_dssp HHHHTCCG
T ss_pred HHHhCCCh
Confidence 99999997
No 32
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.01 E-value=0.017 Score=50.54 Aligned_cols=37 Identities=11% Similarity=-0.020 Sum_probs=31.4
Q ss_pred ccccccCChHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 006764 217 YEDVSTLSLPLYKRLIDVMESRGIRQEIIAGSLTFYAKKY 256 (632)
Q Consensus 217 ~EDl~~Lsldlf~rvI~am~~~g~~~e~I~~aL~~Yakk~ 256 (632)
.++|..|+.+.+..+|+.. ..+++.|+++++.|+++.
T Consensus 46 ~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~d 82 (105)
T 2eqx_A 46 TEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINFN 82 (105)
T ss_dssp SHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHTT
T ss_pred cccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHcC
Confidence 4688999999999999984 456778999999999764
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=92.26 E-value=0.2 Score=43.70 Aligned_cols=83 Identities=11% Similarity=0.064 Sum_probs=57.2
Q ss_pred EEEEECCeEEEeccccccccC-HHHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcC-CCcccCc-chHhHHHH
Q 006764 30 IVVEVGEMSFHLHKFPLLSRS-GAMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYG-VKLELTA-SNVVYLRC 106 (632)
Q Consensus 30 V~I~V~~~~F~lHK~vLas~S-~yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg-~~i~it~-~NV~~L~c 106 (632)
|+|.|||+.|...+..|...- ..|.+|+.....-+....++-|.- .|..|+.|++|.-+ |++.+.+ ..+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDR---dp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDR---NRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECS---CSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcC---ChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999998886542 234445542111101234555532 45899999999997 8986633 34677999
Q ss_pred hhcccccCc
Q 006764 107 AAEHLEMTE 115 (632)
Q Consensus 107 AA~~LqM~e 115 (632)
-|+|.++++
T Consensus 80 Ea~fy~i~~ 88 (100)
T 1t1d_A 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999987
No 34
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=92.14 E-value=0.13 Score=46.68 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=56.7
Q ss_pred eeEEEEECCeEEEeccccccccCHHHHHHhhccccc---ccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCcc-hHhH
Q 006764 28 SDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEK---AEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTAS-NVVY 103 (632)
Q Consensus 28 ~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e---~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~~-NV~~ 103 (632)
.=|+|.|||+.|..-+..|...-+- |+...... ......+-|. -.++.|+.|++|.-+|++.+..+ .+..
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECISA 86 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEEC---SCHHHHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEEc---CChHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 3478899999999988877654321 22221100 0112345543 26799999999999999876442 4688
Q ss_pred HHHhhcccccCc
Q 006764 104 LRCAAEHLEMTE 115 (632)
Q Consensus 104 L~cAA~~LqM~e 115 (632)
++.-|+|.++++
T Consensus 87 l~~Ea~fy~i~~ 98 (124)
T 1s1g_A 87 YDDELAFYGILP 98 (124)
T ss_dssp HHHHHHHTTCCG
T ss_pred HHHHHHHcCCCh
Confidence 999999999997
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=91.41 E-value=0.1 Score=45.89 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=55.6
Q ss_pred EEEEECCeEEEeccccccccCHHHHHHhhccccc---ccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCc-chHhHHH
Q 006764 30 IVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEK---AEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTA-SNVVYLR 105 (632)
Q Consensus 30 V~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e---~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~-~NV~~L~ 105 (632)
|+|.|||+.|...+..|....+- |+...... ......+-|.- .|+.|+.|++|.-+|++.+.+ ..+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~FiDR---dp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFFDR---DPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEECS---CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEEeC---CcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78999999999988877654321 22221100 01234555532 458999999999999987654 3478899
Q ss_pred HhhcccccCc
Q 006764 106 CAAEHLEMTE 115 (632)
Q Consensus 106 cAA~~LqM~e 115 (632)
.-|+|.++++
T Consensus 76 ~Ea~fy~i~~ 85 (105)
T 1nn7_A 76 EELAFFGLIP 85 (105)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHcCCCH
Confidence 9999999997
No 36
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=90.51 E-value=0.15 Score=47.20 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=57.8
Q ss_pred CeeEEEEECCeEEEeccccccccCHHHHHHhhccccc---ccccceEEeCCCCCCHHHHHHHHHHhcCCCcccCc-chHh
Q 006764 27 PSDIVVEVGEMSFHLHKFPLLSRSGAMERLIAEASEK---AEEKCIINLLDIPGRAKTFELVAKFCYGVKLELTA-SNVV 102 (632)
Q Consensus 27 ~~DV~I~V~~~~F~lHK~vLas~S~yfr~Lf~~~~~e---~~~~~~v~L~d~pgga~~felv~~FcYg~~i~it~-~NV~ 102 (632)
..=|+|.|||+.|...+..|...-+- |+...... ......+-|. -.++.|+.|++|.-+|++.+.. ..+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~S---~L~~~~~~~~~~~~~g~yFiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTTS---TTTSGGGGGSEETTTTEEEEC---SCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCCe---eecccCCcccccCCCCeEEEe---CCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 44578899999999998877654321 23221110 0122455543 2579999999999999987643 3478
Q ss_pred HHHHhhcccccCc
Q 006764 103 YLRCAAEHLEMTE 115 (632)
Q Consensus 103 ~L~cAA~~LqM~e 115 (632)
.++.-|+|.++++
T Consensus 108 ~l~eEa~fy~i~~ 120 (140)
T 2nz0_B 108 AYDDELAFYGILP 120 (140)
T ss_dssp HHHHHHHHHTCCG
T ss_pred HHHHHHHHcCCCh
Confidence 8999999999997
No 37
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=82.64 E-value=1.9 Score=32.86 Aligned_cols=35 Identities=34% Similarity=0.418 Sum_probs=30.7
Q ss_pred HhHHHHHHhHHHHHHHHHHHHHHhhhhHHHHHHhc
Q 006764 539 RENQVLKVGMDNMRMRVSELEKECSNMKQEIEKLG 573 (632)
Q Consensus 539 re~~~lr~e~~~mr~rv~eLEkec~~mk~~~~k~~ 573 (632)
+....||.-.+.+-+||.+||..|..+.|||+++.
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~ 38 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLN 38 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 34567888889999999999999999999999875
No 38
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=75.36 E-value=3.4 Score=32.01 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=28.2
Q ss_pred hHhHHHHHHhHHHHHHHHHHHHHHhhhhHHHHHH
Q 006764 538 VRENQVLKVGMDNMRMRVSELEKECSNMKQEIEK 571 (632)
Q Consensus 538 ~re~~~lr~e~~~mr~rv~eLEkec~~mk~~~~k 571 (632)
.-+.+.||.|++.+|.|+.+|.+++..++..+.+
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3467889999999999999999998888887764
No 39
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=71.78 E-value=6.8 Score=30.01 Aligned_cols=37 Identities=30% Similarity=0.443 Sum_probs=32.9
Q ss_pred chhHhHHHHHHhHHHHHHHHHHHHHHhhhhHHHHHHh
Q 006764 536 STVRENQVLKVGMDNMRMRVSELEKECSNMKQEIEKL 572 (632)
Q Consensus 536 ~~~re~~~lr~e~~~mr~rv~eLEkec~~mk~~~~k~ 572 (632)
.+..||-.||.|++.=...++.||.|-+.||.-+..+
T Consensus 14 ~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 14 ALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 4577999999999999999999999999999877654
No 40
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=60.16 E-value=9.9 Score=29.64 Aligned_cols=35 Identities=31% Similarity=0.414 Sum_probs=28.1
Q ss_pred hHHHHHHhHHHHHHHHHHHHHHhhhhHHHHHHhcC
Q 006764 540 ENQVLKVGMDNMRMRVSELEKECSNMKQEIEKLGR 574 (632)
Q Consensus 540 e~~~lr~e~~~mr~rv~eLEkec~~mk~~~~k~~k 574 (632)
....||.--.++-.+|.+||..|+.|-|||+++.+
T Consensus 12 q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 12 QLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456655667888999999999999999999753
No 41
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=59.59 E-value=2.1 Score=28.40 Aligned_cols=16 Identities=38% Similarity=0.285 Sum_probs=13.8
Q ss_pred chHhHHHHhhcccccC
Q 006764 99 SNVVYLRCAAEHLEMT 114 (632)
Q Consensus 99 ~NV~~L~cAA~~LqM~ 114 (632)
.||+.|+.||+||+=.
T Consensus 3 ~nvq~LLeAAeyLErr 18 (26)
T 1pd7_B 3 MNIQMLLEAADYLERR 18 (26)
T ss_dssp CSTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5999999999999743
No 42
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=51.38 E-value=15 Score=40.48 Aligned_cols=84 Identities=8% Similarity=0.048 Sum_probs=55.0
Q ss_pred eEEEEECCeEEEeccccccccCH-HHHHHhhcccccccccceEEeCCCCCCHHHHHHHHHHhcC-CCcccCc-chHhHHH
Q 006764 29 DIVVEVGEMSFHLHKFPLLSRSG-AMERLIAEASEKAEEKCIINLLDIPGRAKTFELVAKFCYG-VKLELTA-SNVVYLR 105 (632)
Q Consensus 29 DV~I~V~~~~F~lHK~vLas~S~-yfr~Lf~~~~~e~~~~~~v~L~d~pgga~~felv~~FcYg-~~i~it~-~NV~~L~ 105 (632)
=|+|.|||+.|...+..|...-+ .+-+++.....-+....+.-+. -.|+.|+.+++|..+ |++.+.. -.+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~D---R~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFD---RNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEEC---SCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEEc---CChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 46789999999998887754321 1122222111100122455552 257999999999998 9987643 2456688
Q ss_pred HhhcccccCc
Q 006764 106 CAAEHLEMTE 115 (632)
Q Consensus 106 cAA~~LqM~e 115 (632)
.-|+|.++.+
T Consensus 130 ~E~~f~~i~~ 139 (514)
T 2r9r_B 130 EEIRFYELGE 139 (514)
T ss_dssp HHHHHTTCCH
T ss_pred HHHHhcCCCH
Confidence 9999999987
No 43
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=47.27 E-value=14 Score=32.73 Aligned_cols=33 Identities=6% Similarity=-0.104 Sum_probs=24.8
Q ss_pred hhcCCCCCChhhHHHHHHhcCCCCCCCchhHHHHHHHHHHhCCC
Q 006764 411 EVAPDVNLKLPKFQKLAATVPDYARPLDDGLYRAIDIYLKSHPW 454 (632)
Q Consensus 411 EvA~D~nL~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLkaHp~ 454 (632)
|...|.+.+|.++.+.+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 34567778888886654 7889999999999983
No 44
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=45.14 E-value=20 Score=30.90 Aligned_cols=26 Identities=31% Similarity=0.336 Sum_probs=23.2
Q ss_pred HhHHHHHHHHHHHHHHhhhhHHHHHH
Q 006764 546 VGMDNMRMRVSELEKECSNMKQEIEK 571 (632)
Q Consensus 546 ~e~~~mr~rv~eLEkec~~mk~~~~k 571 (632)
.||+.||..|-+||..+..||+..+.
T Consensus 50 ~Emq~Ir~tvyeLE~~h~kmKq~YEe 75 (92)
T 3vp9_A 50 AEMQQIRNTVYERELTHRKMKDAYEE 75 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999997754
No 45
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=29.36 E-value=85 Score=24.72 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=20.6
Q ss_pred hHhHHHHHHhHHHHHHHHHHHHHHhhhhHHHHH
Q 006764 538 VRENQVLKVGMDNMRMRVSELEKECSNMKQEIE 570 (632)
Q Consensus 538 ~re~~~lr~e~~~mr~rv~eLEkec~~mk~~~~ 570 (632)
..+.++|+.+-+.++.+|..|++|...+|+-|.
T Consensus 29 e~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~ 61 (63)
T 1ci6_A 29 TGECKELEKKNEALKERADSLAKEIQYLKDLIE 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334556666666666667777777666665553
No 46
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=29.32 E-value=38 Score=26.09 Aligned_cols=31 Identities=10% Similarity=-0.028 Sum_probs=26.9
Q ss_pred CccchhHhHHHHHHhHHHHHHHHHHHHHHhh
Q 006764 533 GWASTVRENQVLKVGMDNMRMRVSELEKECS 563 (632)
Q Consensus 533 ~~~~~~re~~~lr~e~~~mr~rv~eLEkec~ 563 (632)
.+..+.+||++||..++.++.++.||.+...
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4667899999999999999999999987643
No 47
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=28.66 E-value=45 Score=27.52 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=26.6
Q ss_pred hHhHHHHHHhHHHHHHHHHHHHHHhhhhHHHH
Q 006764 538 VRENQVLKVGMDNMRMRVSELEKECSNMKQEI 569 (632)
Q Consensus 538 ~re~~~lr~e~~~mr~rv~eLEkec~~mk~~~ 569 (632)
+.|.+.||..+..+-.|+.+||.|+.-+|+-.
T Consensus 14 REEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 14 REEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55678899999999999999999988887654
No 48
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=27.02 E-value=51 Score=30.18 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=26.3
Q ss_pred hcCCCCCChhhHHHHHHhcCCCCCCCchhHHHHHHHHHHhCCCC
Q 006764 412 VAPDVNLKLPKFQKLAATVPDYARPLDDGLYRAIDIYLKSHPWL 455 (632)
Q Consensus 412 vA~D~nL~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLkaHp~l 455 (632)
...+.++++.+..+.-+. -.++|+|||-||.+||..
T Consensus 122 ~~~~~~~~~~~~~~~~~~--------~~~~~k~ie~yll~~~~~ 157 (159)
T 1e09_A 122 TKGNVEIKEEHVKAGKEK--------ASNLFKLIETYLKGHPDA 157 (159)
T ss_dssp ECSSCCCCHHHHHHHHHH--------HHHHHHHHHHHHHHCTTS
T ss_pred ECCCCCCCHHHHHHHHHH--------HHHHHHHHHHHHHhChhh
Confidence 456677777766543333 378999999999999963
No 49
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=24.01 E-value=98 Score=25.94 Aligned_cols=28 Identities=25% Similarity=0.414 Sum_probs=22.8
Q ss_pred ccchhHhHHHHHHhHHHHHHHHHHHHHH
Q 006764 534 WASTVRENQVLKVGMDNMRMRVSELEKE 561 (632)
Q Consensus 534 ~~~~~re~~~lr~e~~~mr~rv~eLEke 561 (632)
+....+..+.|-.||..+|.||.|||.|
T Consensus 14 ~ee~~~~~E~L~qEi~~Lr~kv~elEnE 41 (81)
T 3qh9_A 14 QEEKQRKAEELLQELRHLKIKVEELENE 41 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566778999999999999999977
No 50
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=21.46 E-value=1e+02 Score=25.27 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=19.9
Q ss_pred HHHhHHHHHHHHHHHHHHhhhhHHHHHHh
Q 006764 544 LKVGMDNMRMRVSELEKECSNMKQEIEKL 572 (632)
Q Consensus 544 lr~e~~~mr~rv~eLEkec~~mk~~~~k~ 572 (632)
|..|.+..+..|.+||.+...+|.+|++.
T Consensus 3 l~~e~~~~~~~i~~lE~eL~~~r~e~~~q 31 (74)
T 2xv5_A 3 SARERDTSRRLLAEKEREMAEMRARMQQQ 31 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777777777777777777776653
Done!