Query 006765
Match_columns 632
No_of_seqs 321 out of 994
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 08:21:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 99.9 1E-27 3.5E-32 242.1 6.3 230 15-327 22-256 (256)
2 3i3n_A Kelch-like protein 11; 99.9 4.1E-27 1.4E-31 240.9 6.7 234 15-331 23-267 (279)
3 3htm_A Speckle-type POZ protei 99.8 2.8E-21 9.6E-26 182.6 12.2 135 14-166 24-161 (172)
4 4eoz_A Speckle-type POZ protei 99.8 1.5E-21 5.3E-26 179.5 6.0 126 14-157 15-140 (145)
5 2vkp_A BTB/POZ domain-containi 99.8 4.6E-21 1.6E-25 168.8 8.5 104 18-131 2-109 (109)
6 2z8h_A Transcription regulator 99.8 5E-21 1.7E-25 176.7 7.5 107 16-133 28-135 (138)
7 1r29_A B-cell lymphoma 6 prote 99.8 9.5E-21 3.2E-25 171.8 9.0 104 16-129 21-125 (127)
8 3b84_A Zinc finger and BTB dom 99.8 3.4E-21 1.2E-25 173.5 6.1 102 16-130 16-117 (119)
9 2if5_A Zinc finger and BTB dom 99.8 9.3E-21 3.2E-25 170.0 8.8 103 17-128 18-120 (120)
10 2vpk_A Myoneurin; transcriptio 99.8 7.2E-21 2.5E-25 170.0 7.9 101 16-129 14-116 (116)
11 1buo_A POZ domain, protein (pr 99.8 9.3E-21 3.2E-25 170.9 8.5 102 16-131 20-121 (121)
12 2yy9_A Zinc finger and BTB dom 99.8 5.7E-21 1.9E-25 176.0 4.9 105 15-132 16-120 (135)
13 3ga1_A Nucleus accumbens-assoc 99.8 8.5E-21 2.9E-25 173.0 5.5 101 17-130 26-127 (129)
14 3ohu_A Transcription regulator 99.8 5.4E-21 1.8E-25 173.0 3.9 101 16-127 24-125 (125)
15 2ppi_A Gigaxonin; BTB domain, 99.8 1.6E-20 5.3E-25 175.2 6.8 104 17-128 40-144 (144)
16 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.3E-20 4.4E-25 169.7 5.7 99 16-128 19-117 (119)
17 2ihc_A Transcription regulator 99.8 7.9E-21 2.7E-25 172.2 3.9 103 15-128 20-123 (124)
18 3m5b_A Zinc finger and BTB dom 99.8 3.7E-20 1.3E-24 167.7 5.7 94 18-129 24-117 (119)
19 3hqi_A Speckle-type POZ protei 99.8 9.5E-19 3.2E-23 181.2 11.4 133 17-168 167-303 (312)
20 3fkc_A Transcriptional regulat 99.7 3.3E-18 1.1E-22 153.8 7.2 88 17-112 24-112 (116)
21 2ast_A S-phase kinase-associat 99.3 1.1E-12 3.9E-17 124.5 7.0 96 27-132 3-127 (159)
22 4ajy_C Transcription elongatio 99.1 1.3E-10 4.6E-15 101.5 7.8 79 27-110 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 3.1E-10 1E-14 105.9 7.4 92 27-132 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 2E-10 7E-15 109.2 -0.6 93 27-132 6-126 (160)
25 1hv2_A Elongin C, ELC1; protei 98.3 1E-06 3.5E-11 77.4 6.7 80 26-110 5-99 (99)
26 3v7d_A Suppressor of kinetocho 98.3 1.3E-06 4.5E-11 83.8 7.3 97 26-131 8-133 (169)
27 2fnj_C Transcription elongatio 98.2 1.1E-06 3.7E-11 76.8 5.6 80 27-110 3-96 (96)
28 1vcb_B Protein (elongin C); tu 97.6 3.8E-05 1.3E-09 68.9 4.4 82 26-110 18-112 (112)
29 3drz_A BTB/POZ domain-containi 97.6 0.00027 9.3E-09 62.6 9.0 94 26-129 7-106 (107)
30 3drx_A BTB/POZ domain-containi 96.2 0.0092 3.1E-07 58.8 7.4 96 26-131 13-114 (202)
31 3kvt_A Potassium channel prote 95.3 0.0054 1.9E-07 55.1 1.8 83 27-112 7-91 (115)
32 2eqx_A Kelch repeat and BTB do 94.8 0.014 4.7E-07 51.1 2.8 36 214-252 47-82 (105)
33 1t1d_A Protein (potassium chan 93.9 0.058 2E-06 47.2 4.8 83 27-112 3-88 (100)
34 1s1g_A Potassium voltage-gated 93.4 0.065 2.2E-06 48.7 4.4 81 26-112 14-98 (124)
35 1nn7_A Potassium channel KV4.2 92.4 0.053 1.8E-06 47.8 2.2 80 27-112 2-85 (105)
36 2nz0_B Potassium voltage-gated 91.7 0.08 2.7E-06 49.1 2.7 83 24-112 34-120 (140)
37 3vmx_A Voltage-gated hydrogen 83.1 1.7 5.8E-05 33.1 4.7 35 538-572 5-39 (48)
38 1deb_A APC protein, adenomatou 79.9 2.8 9.7E-05 32.1 4.9 39 532-570 12-50 (54)
39 2yy0_A C-MYC-binding protein; 75.5 3.1 0.00011 32.3 4.2 32 538-569 20-51 (53)
40 1pd7_B MAD1; PAH2, SIN3, eukar 63.1 2 6.8E-05 28.5 0.6 16 96-111 3-18 (26)
41 2r9r_B Paddle chimera voltage 61.3 8.6 0.00029 42.5 5.6 84 26-112 53-139 (514)
42 3a2a_A Voltage-gated hydrogen 61.3 10 0.00034 29.7 4.2 33 540-572 14-46 (58)
43 1vjh_A BET V I allergen family 48.4 12 0.00041 33.2 3.3 33 404-447 90-122 (122)
44 3vp9_A General transcriptional 43.3 23 0.00079 30.5 4.1 25 544-568 50-74 (92)
45 2yy0_A C-MYC-binding protein; 41.5 20 0.00069 27.7 3.2 31 531-561 20-50 (53)
46 1dip_A Delta-sleep-inducing pe 34.0 36 0.0012 28.2 3.6 33 535-567 13-45 (78)
47 1ci6_A Transcription factor AT 29.7 73 0.0025 25.2 4.8 34 535-568 28-61 (63)
48 3qh9_A Liprin-beta-2; coiled-c 28.2 78 0.0027 26.6 4.8 27 533-559 15-41 (81)
49 3b0b_C CENP-X, centromere prot 25.9 65 0.0022 27.0 4.0 43 350-405 6-48 (81)
50 3htm_A Speckle-type POZ protei 22.4 70 0.0024 28.7 4.0 45 78-131 120-164 (172)
51 2xv5_A Lamin-A/C; structural p 22.4 96 0.0033 25.5 4.3 29 542-570 3-31 (74)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.94 E-value=1e-27 Score=242.14 Aligned_cols=230 Identities=13% Similarity=0.082 Sum_probs=170.0
Q ss_pred hhhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccC-CCCccceEEecCCCCCHHHHHHHHHhhcCCcccc
Q 006765 15 NDWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQS-THIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEF 93 (632)
Q Consensus 15 ~~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e-~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~i 93 (632)
-..++.+|.+|||+|.|||+.|++||.+|+++|+||++||+.+.. ......+|.|+++ .+++|+.+++|+|||++.+
T Consensus 22 l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v--~~~~f~~ll~~~Yt~~~~i 99 (256)
T 3hve_A 22 LSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGI--SVMVMREILDYIFSGQIRL 99 (256)
T ss_dssp HHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSC--CHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCC--CHHHHHHHHhhccCCCCcc
Confidence 345789999999999999999999999999999999999987532 1112578999999 4799999999999999999
Q ss_pred CcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhhhhhhHHHHHhhcchhHHHHHHhhc---hhHHHHHHHHHHhc
Q 006765 94 TPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVLRAWKDCILALQSSESVLPRADRLQ---ILSKCLNALSMMAC 170 (632)
Q Consensus 94 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~dsi~~L~sC~~L~p~Ae~l~---Iv~RCidsLa~kac 170 (632)
+.+||..++.||++|||++ |++.|+.||.+.+.. .||..++.+|+.++ +...|.+-|+...
T Consensus 100 ~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f- 163 (256)
T 3hve_A 100 NEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCIAA---------ENCIGIRDFALHYCLHHVHYLATEYLETHF- 163 (256)
T ss_dssp C-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCCS---------STTHHHHHHHHHTTCHHHHHHHHHHHHHHH-
T ss_pred cHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhCCH---------hhHHHHHHHHHHcCcHHHHHHHHHHHHHHH-
Confidence 9999999999999999998 999999999999854 59999999999987 4555655554432
Q ss_pred CCCCCCcccccccCCCCCCCCCccccccccCcccCCCCCcccccccccCChHHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q 006765 171 TDPSLFGWPMMMYGSLQSPGGSILWNGINTGARIRSSESDWWFEDLSYLSVGLFERLIKTMEARGMRPENLAGAIMYYAR 250 (632)
Q Consensus 171 ~d~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~r~~~~~~dWW~EDl~~Ls~~lf~rvI~am~~~g~~~e~I~~aL~~Yak 250 (632)
..+ +-.+++..|+.+.+..+|+.......+++.|..+++.|++
T Consensus 164 ---~~v----------------------------------~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~ 206 (256)
T 3hve_A 164 ---RDV----------------------------------SSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIA 206 (256)
T ss_dssp ---HHH----------------------------------TTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCC
T ss_pred ---HHH----------------------------------hCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHH
Confidence 000 0036888999999999999988888889999999999986
Q ss_pred hhcCCCCCcCCCCCCCccccccCCCChhhHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHhhCCC-HHHHHHHHH
Q 006765 251 KYLPGLGRWQGGQSSNTRRVTSYSLTPAAVDQKVLLETIENLLPEKKGKSFCRFLVGLLRVALILGVN-EKCKESLER 327 (632)
Q Consensus 251 k~lpg~~~~~~~~~~~~~~~~~~~~~~~~~~qr~LLEtIv~lLp~~k~~vs~~fLf~LLR~A~~l~as-~~cr~~LE~ 327 (632)
+..+. | ...-..|++.|+. +.+|..||...+.....+..+ +.|+.-|++
T Consensus 207 ~~~~~--R--------------------~~~~~~ll~~VRf------~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 207 HDTEI--R--------------------KVHMKDVMSALWV------SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp C--CC--S--------------------TTTHHHHHHHHHH------HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred cCHHH--H--------------------HHHHHHHHHhCCC------CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 54322 1 2345789999986 568888999999988888888 689988875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.93 E-value=4.1e-27 Score=240.88 Aligned_cols=234 Identities=14% Similarity=0.164 Sum_probs=186.2
Q ss_pred hhhhhhcCCCeeEEEEEC---CEEEEeeccccccccHHHHHhhhccc-CCCCccceEEecCC----CCCHHHHHHHHHhh
Q 006765 15 NDWYCSAGLPSDITVIVE---GINFHLHKFPLVSKCAKIARIYEESQ-STHIKTFTTELEDF----PGGPGTFLIAAKFC 86 (632)
Q Consensus 15 ~~w~r~~g~~~DV~v~V~---~~~F~lHK~vLas~S~yfr~lf~~~~-e~~~~~~~v~L~d~----pggae~Felv~~Fc 86 (632)
-..+|.+|.+|||+|.|| |+.|++||.+|+++|+||++||+++. +.. ..+|.|+++ ..++++|+.+++|+
T Consensus 23 l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~--~~~i~l~~~~~~~~v~~~~f~~ll~~~ 100 (279)
T 3i3n_A 23 QNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESR--SGRVEMRKWSSEPGPEPDTVEAVIEYM 100 (279)
T ss_dssp HHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC----------EEECCCCSSTTCSCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCcccc--CCeEEeccccccCCCCHHHHHHHHHhh
Confidence 345789999999999998 99999999999999999999998763 333 568999833 12589999999999
Q ss_pred cCCccccCcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhhhhhhHHHHHhhcchhHHHHHHhhc---hhHHHHH
Q 006765 87 YGHRVEFTPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVLRAWKDCILALQSSESVLPRADRLQ---ILSKCLN 163 (632)
Q Consensus 87 Yg~~i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~dsi~~L~sC~~L~p~Ae~l~---Iv~RCid 163 (632)
|||++.++.+||..|+.||++|||++ |.+.|+.||.+.+.. .||..++.+|+.++ +.++|.+
T Consensus 101 Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~ 165 (279)
T 3i3n_A 101 YTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLHL---------SNCVAIHSLAHMYTLSQLALKAAD 165 (279)
T ss_dssp HHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCCT---------TTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCCc---------chHHHHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999999999999998 999999999998854 59999999999998 4555555
Q ss_pred HHHHHhcCCCCCCcccccccCCCCCCCCCccccccccCcccCCCCCcccccccccCChHHHHHHHHHHHhcCCChhhHHH
Q 006765 164 ALSMMACTDPSLFGWPMMMYGSLQSPGGSILWNGINTGARIRSSESDWWFEDLSYLSVGLFERLIKTMEARGMRPENLAG 243 (632)
Q Consensus 164 sLa~kac~d~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~r~~~~~~dWW~EDl~~Ls~~lf~rvI~am~~~g~~~e~I~~ 243 (632)
-|+... ..+ +-.+++..|+.+.+..+|+.......+++.|..
T Consensus 166 ~i~~~f----~~v----------------------------------~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~ 207 (279)
T 3i3n_A 166 MIRRNF----HKV----------------------------------IQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFE 207 (279)
T ss_dssp HHHHTH----HHH----------------------------------TTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHH
T ss_pred HHHHHH----HHH----------------------------------hcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHH
Confidence 554332 100 013688899999999999988887778999999
Q ss_pred HHHHHHHhhcCCCCCcCCCCCCCccccccCCCChhhHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHhhCCCHHHHH
Q 006765 244 AIMYYARKYLPGLGRWQGGQSSNTRRVTSYSLTPAAVDQKVLLETIENLLPEKKGKSFCRFLVGLLRVALILGVNEKCKE 323 (632)
Q Consensus 244 aL~~Yakk~lpg~~~~~~~~~~~~~~~~~~~~~~~~~~qr~LLEtIv~lLp~~k~~vs~~fLf~LLR~A~~l~as~~cr~ 323 (632)
+++.|+++..+. ....-..|++.|+. +.+|..+|..+++....+..++.|+.
T Consensus 208 av~~W~~~~~~~----------------------r~~~~~~ll~~VRf------~l~~~~~L~~~v~~~~l~~~~~~c~~ 259 (279)
T 3i3n_A 208 TVLKWVQRNAEE----------------------RERYFEELFKLLRL------SQMKPTYLTRHVKPERLVANNEVCVK 259 (279)
T ss_dssp HHHHHHHTTHHH----------------------HTTTHHHHHTTSCG------GGSCHHHHHHTTTTSHHHHTCHHHHH
T ss_pred HHHHHHHcCHHH----------------------HHHHHHHHHHhcCC------CCCCHHHHHHHhhccchhcCCHHHHH
Confidence 999999754321 11233456666664 67899999999999999999999999
Q ss_pred HHHHHHhc
Q 006765 324 SLERRIGM 331 (632)
Q Consensus 324 ~LE~rIg~ 331 (632)
.|....--
T Consensus 260 ~l~ea~~~ 267 (279)
T 3i3n_A 260 LVADAVER 267 (279)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88766543
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.85 E-value=2.8e-21 Score=182.62 Aligned_cols=135 Identities=19% Similarity=0.230 Sum_probs=117.4
Q ss_pred chhhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCcccc
Q 006765 14 GNDWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEF 93 (632)
Q Consensus 14 ~~~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~i 93 (632)
.-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+. ....|.|+++ .+++|+.+++|+||+++.+
T Consensus 24 ~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~-~~~~i~l~~~--~~~~f~~~l~~~Yt~~~~~ 100 (172)
T 3htm_A 24 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES-KKNRVEINDV--EPEVFKEMMCFIYTGKAPN 100 (172)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGG-GTTEEEECSS--CHHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCcccc-CCCeEEecCC--CHHHHHHHHHHHhCCCCCC
Confidence 444678899999999999999999999999999999999999763222 2478999999 4799999999999999999
Q ss_pred CcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhhhhhhHHHHHhhcchhHHHHHHhhc---hhHHHHHHHH
Q 006765 94 TPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVLRAWKDCILALQSSESVLPRADRLQ---ILSKCLNALS 166 (632)
Q Consensus 94 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~dsi~~L~sC~~L~p~Ae~l~---Iv~RCidsLa 166 (632)
+.+|+..|+.+|++|+|++ |.+.|+.||.+.+. ..+|..++.+|+.++ |...|++-|+
T Consensus 101 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~---------~~n~~~~~~~A~~~~~~~L~~~~~~~i~ 161 (172)
T 3htm_A 101 LDKMADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSADQLKTQAVDFIN 161 (172)
T ss_dssp GGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhCC---------HHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 9999999999999999998 99999999999884 469999999999987 4455555444
No 4
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.83 E-value=1.5e-21 Score=179.46 Aligned_cols=126 Identities=20% Similarity=0.219 Sum_probs=93.9
Q ss_pred chhhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCcccc
Q 006765 14 GNDWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEF 93 (632)
Q Consensus 14 ~~~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~i 93 (632)
+-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+. ....|.|+++ .+++|+.+++|+||+++.+
T Consensus 15 ~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~-~~~~i~l~~~--~~~~~~~~l~~~Y~~~~~~ 91 (145)
T 4eoz_A 15 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES-KKNRVEINDV--EPEVFKEMMCFIYTGKAPN 91 (145)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHH-HHTEEEECSS--CHHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCC-CCceEEecCC--CHHHHHHHHHhhccCccCC
Confidence 344567899999999999999999999999999999999998763221 1468999998 5799999999999999999
Q ss_pred CcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhhhhhhHHHHHhhcchhHHHHHHhhch
Q 006765 94 TPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVLRAWKDCILALQSSESVLPRADRLQI 157 (632)
Q Consensus 94 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~dsi~~L~sC~~L~p~Ae~l~I 157 (632)
+.+|+..|+.+|++++|++ |.+.|+.||.+.+. ..||..++.+|+.+++
T Consensus 92 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~---------~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 92 LDKMADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSA 140 (145)
T ss_dssp GGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred cHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhCC---------HHHHHHHHHHHHHhCH
Confidence 9999999999999999998 99999999999884 5699999999999875
No 5
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.83 E-value=4.6e-21 Score=168.81 Aligned_cols=104 Identities=16% Similarity=0.300 Sum_probs=92.1
Q ss_pred hhhcCCCeeEEEEECC----EEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCcccc
Q 006765 18 YCSAGLPSDITVIVEG----INFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEF 93 (632)
Q Consensus 18 ~r~~g~~~DV~v~V~~----~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~i 93 (632)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||.....+. ...|.|+++ .+++|+.+++|+||+++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~--~~~i~l~~~--~~~~f~~~l~~iYt~~~~~ 77 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV--KSEIHIPDV--EPAAFLILLKYMYSDEIDL 77 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC--------CCEEEETTS--CHHHHHHHHHHHHHCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC--CCeEEeCCC--CHHHHHHHHHHHcCCCccC
Confidence 4678999999999998 9999999999999999999998764332 268999998 5799999999999999999
Q ss_pred CcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhh
Q 006765 94 TPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNV 131 (632)
Q Consensus 94 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 131 (632)
+.+||..|+.+|++++|++ |.+.|+.||.+.+
T Consensus 78 ~~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 78 EADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 9999999999999999998 9999999998764
No 6
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.83 E-value=5e-21 Score=176.67 Aligned_cols=107 Identities=18% Similarity=0.263 Sum_probs=97.3
Q ss_pred hhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEec-CCCCCHHHHHHHHHhhcCCccccC
Q 006765 16 DWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELE-DFPGGPGTFLIAAKFCYGHRVEFT 94 (632)
Q Consensus 16 ~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~-d~pggae~Felv~~FcYg~~i~it 94 (632)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ ...|.|+ ++ .+++|+.+++|+|||++.++
T Consensus 28 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~v--~~~~~~~lL~~~Ytg~~~i~ 102 (138)
T 2z8h_A 28 NDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA---ELTVTLPEEV--TVKGFEPLIQFAYTAKLILS 102 (138)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT---TEEEECCTTS--CHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC---CceEEeCCCC--CHHHHHHHHHHhcCCCcccC
Confidence 457889999999999999999999999999999999999876433 2578885 78 47999999999999999999
Q ss_pred cchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhhh
Q 006765 95 PRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVLR 133 (632)
Q Consensus 95 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~ 133 (632)
.+||..|+.||++|||++ |++.|+.||.+.+..
T Consensus 103 ~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~ 135 (138)
T 2z8h_A 103 KDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLD 135 (138)
T ss_dssp TTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSC
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhccc
Confidence 999999999999999998 999999999988754
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.83 E-value=9.5e-21 Score=171.83 Aligned_cols=104 Identities=24% Similarity=0.401 Sum_probs=95.6
Q ss_pred hhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEe-cCCCCCHHHHHHHHHhhcCCccccC
Q 006765 16 DWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTEL-EDFPGGPGTFLIAAKFCYGHRVEFT 94 (632)
Q Consensus 16 ~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L-~d~pggae~Felv~~FcYg~~i~it 94 (632)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+. ...|.| +++ .+++|+.+++|+||+++.++
T Consensus 21 ~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~--~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~~ 96 (127)
T 1r29_A 21 NRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRN--LSVINLDPEI--NPEGFNILLDFMYTSRLNLR 96 (127)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTT--CSEEECCTTS--CHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCC--CCEEEeCCCC--CHHHHHHHHHHHcCCCcCcC
Confidence 3478899999999999999999999999999999999998764322 578999 888 47999999999999999999
Q ss_pred cchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHH
Q 006765 95 PRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHK 129 (632)
Q Consensus 95 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 129 (632)
.+||..|+.||++|+|++ |.+.|+.||.+
T Consensus 97 ~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 97 EGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 999999999999999998 99999999976
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.83 E-value=3.4e-21 Score=173.45 Aligned_cols=102 Identities=23% Similarity=0.186 Sum_probs=92.5
Q ss_pred hhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc
Q 006765 16 DWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP 95 (632)
Q Consensus 16 ~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~ 95 (632)
..++.+|.+|||+|.|+|++|++||.+|+++|+||++||.... ...|.|++++ +++|+.+++|+|||++.++.
T Consensus 16 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~ 88 (119)
T 3b84_A 16 NKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTS 88 (119)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCH
Confidence 3578899999999999999999999999999999999998754 2579999985 79999999999999999999
Q ss_pred chHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHh
Q 006765 96 RNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKN 130 (632)
Q Consensus 96 ~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 130 (632)
+||..|+.||++|+|++ |.+.|++||.+.
T Consensus 89 ~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 89 GNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp TTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 99999999999999998 999999999764
No 9
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.83 E-value=9.3e-21 Score=170.03 Aligned_cols=103 Identities=17% Similarity=0.292 Sum_probs=92.1
Q ss_pred hhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCccccCcc
Q 006765 17 WYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTPR 96 (632)
Q Consensus 17 w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~~ 96 (632)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+. ....|.|+++ .+++|+.+++|+|||++.++.+
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~-~~~~i~l~~~--~~~~f~~ll~~~Yt~~~~~~~~ 94 (120)
T 2if5_A 18 EQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD-QQNVYEIDFV--SAEALTALMDFAYTATLTVSTA 94 (120)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECCSS--CHHHHHHHHHHHHHSCCCCCGG
T ss_pred HHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc-CCceEEeCCC--CHHHHHHHHHHHcCCCCccCHH
Confidence 468899999999999999999999999999999999998763222 1468999998 4799999999999999999999
Q ss_pred hHHHHHHHhhhhcCCCCCCcchHHHHHHHHHH
Q 006765 97 NIVTVYAAADYLEMTDEDDEDNLVSQSESFFH 128 (632)
Q Consensus 97 NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 128 (632)
|+..|+.||++|+|++ |++.|++||+
T Consensus 95 ~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 95 NVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp GHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 9999999999999998 9999999984
No 10
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.82 E-value=7.2e-21 Score=170.00 Aligned_cols=101 Identities=21% Similarity=0.334 Sum_probs=92.0
Q ss_pred hhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEec--CCCCCHHHHHHHHHhhcCCcccc
Q 006765 16 DWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELE--DFPGGPGTFLIAAKFCYGHRVEF 93 (632)
Q Consensus 16 ~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~--d~pggae~Felv~~FcYg~~i~i 93 (632)
..++.+|.+|||+|.|+|+.|++||.+|+++|+||++||.... ...|.|+ ++ .+++|+.+++|+|||++.+
T Consensus 14 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~~ 86 (116)
T 2vpk_A 14 NKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-----ENNVFLDQSQV--KADGFQKLLEFIYTGTLNL 86 (116)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-----CSCEECCTTTC--CHHHHHHHHHHHHHSCCCC
T ss_pred HHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-----CCeEEeecCCC--CHHHHHHHHHHHcCCCccc
Confidence 4578899999999999999999999999999999999998752 3467777 88 5799999999999999999
Q ss_pred CcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHH
Q 006765 94 TPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHK 129 (632)
Q Consensus 94 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 129 (632)
+.+||..|+.||++|||++ |++.|++||.+
T Consensus 87 ~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 87 DSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 9999999999999999998 99999999853
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.82 E-value=9.3e-21 Score=170.91 Aligned_cols=102 Identities=19% Similarity=0.298 Sum_probs=94.3
Q ss_pred hhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc
Q 006765 16 DWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP 95 (632)
Q Consensus 16 ~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~ 95 (632)
..++.+|.+|||+|.|+|+.|++||.+|+++|+||++||.+. ..+|.|++++ +++|+.+++|+|||++.++.
T Consensus 20 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~ 91 (121)
T 1buo_A 20 NQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN------SQHYTLDFLS--PKTFQQILEYAYTATLQAKA 91 (121)
T ss_dssp HHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSC--HHHHHHHHHHHHHSCCCCCG
T ss_pred HHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC------CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCH
Confidence 357889999999999999999999999999999999999753 3579999994 79999999999999999999
Q ss_pred chHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhh
Q 006765 96 RNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNV 131 (632)
Q Consensus 96 ~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 131 (632)
+|+..|+.||++|+|++ |.+.|++||.+.+
T Consensus 92 ~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~I 121 (121)
T 1buo_A 92 EDLDDLLYAAEILEIEY------LEEQCLKMLETIQ 121 (121)
T ss_dssp GGHHHHHHHHHHHTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCHH------HHHHHHHHHHHhC
Confidence 99999999999999998 9999999998753
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.81 E-value=5.7e-21 Score=176.02 Aligned_cols=105 Identities=23% Similarity=0.192 Sum_probs=92.1
Q ss_pred hhhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCccccC
Q 006765 15 NDWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFT 94 (632)
Q Consensus 15 ~~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it 94 (632)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ..+|.|++++ +++|+.+++|+||+++.++
T Consensus 16 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~ 88 (135)
T 2yy9_A 16 LNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLPAGF--AEIFGLLLDFFYTGHLALT 88 (135)
T ss_dssp HHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGG--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCC
Confidence 34578999999999999999999999999999999999998654 2579999985 7999999999999999999
Q ss_pred cchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhh
Q 006765 95 PRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVL 132 (632)
Q Consensus 95 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 132 (632)
.+||..|+.||++|+|++ |++.|++||.+.+.
T Consensus 89 ~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 89 SGNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 999999999999999998 99999999988763
No 13
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.81 E-value=8.5e-21 Score=173.01 Aligned_cols=101 Identities=23% Similarity=0.425 Sum_probs=86.9
Q ss_pred hhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEec-CCCCCHHHHHHHHHhhcCCccccCc
Q 006765 17 WYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELE-DFPGGPGTFLIAAKFCYGHRVEFTP 95 (632)
Q Consensus 17 w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~-d~pggae~Felv~~FcYg~~i~it~ 95 (632)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... . ..+|.|+ ++ .+++|+.+++|+|||++.++.
T Consensus 26 ~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~--~~~i~l~~~~--~~~~f~~ll~~iYtg~~~i~~ 98 (129)
T 3ga1_A 26 EQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---R--SAVVELPAAV--QPQSFQQILSFCYTGRLSMNV 98 (129)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---C--CSEEECCTTC--CHHHHHHHHHHHHHSEEECCT
T ss_pred HHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---C--CCEEEECCCC--CHHHHHHHHHHHhCCccccCH
Confidence 46789999999999999999999999999999999999876 1 4689996 88 479999999999999999999
Q ss_pred chHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHh
Q 006765 96 RNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKN 130 (632)
Q Consensus 96 ~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 130 (632)
+||..|+.||++|||++ |++.|++||.+.
T Consensus 99 ~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 99 GDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp TTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 99999999999999999 999999999875
No 14
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.81 E-value=5.4e-21 Score=173.01 Aligned_cols=101 Identities=21% Similarity=0.279 Sum_probs=92.0
Q ss_pred hhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecC-CCCCHHHHHHHHHhhcCCccccC
Q 006765 16 DWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELED-FPGGPGTFLIAAKFCYGHRVEFT 94 (632)
Q Consensus 16 ~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d-~pggae~Felv~~FcYg~~i~it 94 (632)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ ...|.|++ + .+++|+.+++|+|||++.++
T Consensus 24 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~~--~~~~f~~~l~~iYtg~~~~~ 98 (125)
T 3ohu_A 24 NDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN---DLVVSLPEEV--TARGFGPLLQFAYTAKLLLS 98 (125)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS---SCEEECCTTC--CHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC---CcEEEeCCCC--CHHHHHHHHHhHcCCceEEC
Confidence 357889999999999999999999999999999999999876433 36899987 8 57999999999999999999
Q ss_pred cchHHHHHHHhhhhcCCCCCCcchHHHHHHHHH
Q 006765 95 PRNIVTVYAAADYLEMTDEDDEDNLVSQSESFF 127 (632)
Q Consensus 95 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL 127 (632)
.+||..|+.||++|+|++ |.+.|++||
T Consensus 99 ~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 99 RENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp TTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 999999999999999998 999888775
No 15
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=175.22 Aligned_cols=104 Identities=18% Similarity=0.230 Sum_probs=90.6
Q ss_pred hhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCC-CCccceEEecCCCCCHHHHHHHHHhhcCCccccCc
Q 006765 17 WYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQST-HIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP 95 (632)
Q Consensus 17 w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~-~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~ 95 (632)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ ......|.|++++ +++|+.+++|+|||++.++.
T Consensus 40 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~ 117 (144)
T 2ppi_A 40 SFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNE 117 (144)
T ss_dssp HTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCT
T ss_pred HHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCH
Confidence 47889999999999999999999999999999999999875321 1125689999985 79999999999999999999
Q ss_pred chHHHHHHHhhhhcCCCCCCcchHHHHHHHHHH
Q 006765 96 RNIVTVYAAADYLEMTDEDDEDNLVSQSESFFH 128 (632)
Q Consensus 96 ~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 128 (632)
+||..|+.||++|+|++ |++.|++||.
T Consensus 118 ~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 118 DTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp TTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred HHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 99999999999999998 9999999974
No 16
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.81 E-value=1.3e-20 Score=169.71 Aligned_cols=99 Identities=21% Similarity=0.367 Sum_probs=90.9
Q ss_pred hhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc
Q 006765 16 DWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP 95 (632)
Q Consensus 16 ~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~ 95 (632)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||++. ...|.|+++ .+++|+.+++|+|||++.++.
T Consensus 19 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~ 90 (119)
T 2q81_A 19 NQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLDIS--NAAGLGQVLEFMYTAKLSLSP 90 (119)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGGGC--CHHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCC--CHHHHHHHHHHHcCCCCccCH
Confidence 357889999999999999999999999999999999999863 245677777 479999999999999999999
Q ss_pred chHHHHHHHhhhhcCCCCCCcchHHHHHHHHHH
Q 006765 96 RNIVTVYAAADYLEMTDEDDEDNLVSQSESFFH 128 (632)
Q Consensus 96 ~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 128 (632)
+||..|+.||++|+|++ |++.|++||.
T Consensus 91 ~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 91 ENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp TTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 99999999999999998 9999999985
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.80 E-value=7.9e-21 Score=172.25 Aligned_cols=103 Identities=16% Similarity=0.241 Sum_probs=91.7
Q ss_pred hhhhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEec-CCCCCHHHHHHHHHhhcCCcccc
Q 006765 15 NDWYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELE-DFPGGPGTFLIAAKFCYGHRVEF 93 (632)
Q Consensus 15 ~~w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~-d~pggae~Felv~~FcYg~~i~i 93 (632)
-..++.+|.+|||+|.|+|+.|++||.+|+++|+||++||++...+ ...|.|+ ++ .+++|+.+++|+|||++.+
T Consensus 20 l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e---~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i 94 (124)
T 2ihc_A 20 LNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG---ELNITLPEEV--TVKGFEPLIQFAYTAKLIL 94 (124)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTS--CHHHHHHHHHHHHHSEEEE
T ss_pred HHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC---CceEeecCCc--CHHHHHHHHHHhcCCCccc
Confidence 3457899999999999999999999999999999999999876433 2578884 78 5799999999999999999
Q ss_pred CcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHH
Q 006765 94 TPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFH 128 (632)
Q Consensus 94 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 128 (632)
+.+||..|+.||++|||++ |++.|++||.
T Consensus 95 ~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 95 SKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp ETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred CHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 9999999999999999999 9999999875
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.79 E-value=3.7e-20 Score=167.74 Aligned_cols=94 Identities=21% Similarity=0.218 Sum_probs=85.8
Q ss_pred hhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCccccCcch
Q 006765 18 YCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTPRN 97 (632)
Q Consensus 18 ~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~~N 97 (632)
.|.+|.+|||+|.|+|+.|++||.+|+++|+||++ . ...|.|+++ .+++|+.+++|+|||++.|+.+|
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~--~~~i~l~~v--~~~~f~~ll~fiYtg~~~i~~~~ 91 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------R--GQWALGEGI--SPSTFAQLLNFVYGESVELQPGE 91 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------C--EEEECCSSC--CHHHHHHHHHHHTTCCEEECGGG
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------C--CCEEEeCCC--CHHHHHHHHHHHcCCCcCcCHHH
Confidence 47789999999999999999999999999999974 1 357889999 47999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCcchHHHHHHHHHHH
Q 006765 98 IVTVYAAADYLEMTDEDDEDNLVSQSESFFHK 129 (632)
Q Consensus 98 V~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 129 (632)
|..|+.||++|||+. |++.|++++.+
T Consensus 92 v~~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 92 LRPLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 999999999999998 99999999876
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.77 E-value=9.5e-19 Score=181.21 Aligned_cols=133 Identities=18% Similarity=0.237 Sum_probs=116.4
Q ss_pred hhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhccc-CCCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc
Q 006765 17 WYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQ-STHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP 95 (632)
Q Consensus 17 w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~-e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~ 95 (632)
.++.++.+|||+|.|+|++|++||.+|+++|+||++||.... +.. ..+|.|+|+ .+++|+.+++|+||+++.++.
T Consensus 167 ~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~--~~~i~l~~~--~~~~f~~~L~~iYt~~~~~~~ 242 (312)
T 3hqi_A 167 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESK--KNRVEINDV--EPEVFKEMMCFIYTGKAPNLD 242 (312)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----C--CSEEEECSS--CHHHHHHHHHHHHHSCCTTHH
T ss_pred HHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccC--CceEEecCC--CHHHHHHHHHhhcCCCCCChH
Confidence 466889999999999999999999999999999999998763 332 578999999 579999999999999999999
Q ss_pred chHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhhhhhhHHHHHhhcchhHHHHHHhhc---hhHHHHHHHHHH
Q 006765 96 RNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVLRAWKDCILALQSSESVLPRADRLQ---ILSKCLNALSMM 168 (632)
Q Consensus 96 ~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~dsi~~L~sC~~L~p~Ae~l~---Iv~RCidsLa~k 168 (632)
+|+..|+.||++++|+. |...|+.||.+.+. ..+|..++.+|+.++ |...|++-|+..
T Consensus 243 ~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~~---------~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 243 KMADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHHHHHHHHHHHTTCHH------HHHHHHHHHHTTCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCHHH------HHHHHHHHHHccCC---------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999998 99999999999874 468999999999985 667777776643
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.73 E-value=3.3e-18 Score=153.76 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=81.9
Q ss_pred hhhhcCCCeeEEEEECCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCcc-ccCc
Q 006765 17 WYCSAGLPSDITVIVEGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRV-EFTP 95 (632)
Q Consensus 17 w~r~~g~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i-~it~ 95 (632)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ...|.|+++ .+++|+.+++|+|||++ .++.
T Consensus 24 ~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~~~--~~~~f~~~l~~~Ytg~~~~~~~ 95 (116)
T 3fkc_A 24 EQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA------GQVVELSFI--RAEIFAEILNYIYSSKIVRVRS 95 (116)
T ss_dssp HHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSS--CHHHHHHHHHHHTTSCCCSCCH
T ss_pred HHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCC--CHHHHHHHHHhhcCCCcCCCCH
Confidence 46789999999999999999999999999999999999864 258999999 47999999999999999 7999
Q ss_pred chHHHHHHHhhhhcCCC
Q 006765 96 RNIVTVYAAADYLEMTD 112 (632)
Q Consensus 96 ~NV~~L~cAA~~LqMte 112 (632)
+||..++.||++|||+.
T Consensus 96 ~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 96 DLLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhCccc
Confidence 99999999999999985
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.33 E-value=1.1e-12 Score=124.46 Aligned_cols=96 Identities=14% Similarity=0.245 Sum_probs=82.7
Q ss_pred EEEEE-CCEEEEeeccccccccHHHHHhhhc-ccC-CCCccceEEecCCCCCHHHHHHHHHhhcCCc-------------
Q 006765 27 ITVIV-EGINFHLHKFPLVSKCAKIARIYEE-SQS-THIKTFTTELEDFPGGPGTFLIAAKFCYGHR------------- 90 (632)
Q Consensus 27 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~-~~e-~~~~~~~v~L~d~pggae~Felv~~FcYg~~------------- 90 (632)
|+|.. +|+.|.+|+.+ |++|+||+.||.. +.. +. ....|.|++|+ +.+++.|++|||..+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~-~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~ 78 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEG-DDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKE 78 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS-------CEECTTSC--HHHHHHHHHHHHHTTTCCC---------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccc-cCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccc
Confidence 77765 79999999998 8999999999987 322 21 24689999995 599999999999887
Q ss_pred -------------cccCcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhh
Q 006765 91 -------------VEFTPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVL 132 (632)
Q Consensus 91 -------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 132 (632)
+.++..|+..|+.||.||+|.. |++.|+.|+..++.
T Consensus 79 ~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 79 KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred cchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 8999999999999999999998 99999999999884
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.10 E-value=1.3e-10 Score=101.53 Aligned_cols=79 Identities=13% Similarity=0.282 Sum_probs=65.5
Q ss_pred EEEEE-CCEEEEeeccccccccHHHHHhhhcc---cCCCCccceEEecCCCCCHHHHHHHHHhhc-----C---Cccc--
Q 006765 27 ITVIV-EGINFHLHKFPLVSKCAKIARIYEES---QSTHIKTFTTELEDFPGGPGTFLIAAKFCY-----G---HRVE-- 92 (632)
Q Consensus 27 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~~~v~L~d~pggae~Felv~~FcY-----g---~~i~-- 92 (632)
|+|+- +|+.|.+||.+ |+.|+||+.||++. .+.. ...|.|++++ +.+++.+++||| + +.|.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~--~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~ 78 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENE--TNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEF 78 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC----------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccC--CCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcC
Confidence 55554 79999999998 99999999999863 2222 4689999995 699999999999 5 6777
Q ss_pred -cCcchHHHHHHHhhhhcC
Q 006765 93 -FTPRNIVTVYAAADYLEM 110 (632)
Q Consensus 93 -it~~NV~~L~cAA~~LqM 110 (632)
|+++|+..|+.||.||+.
T Consensus 79 ~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp CCCGGGHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHhhhCC
Confidence 999999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.03 E-value=3.1e-10 Score=105.86 Aligned_cols=92 Identities=14% Similarity=0.243 Sum_probs=81.7
Q ss_pred EEEEE-CCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCc---------------
Q 006765 27 ITVIV-EGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHR--------------- 90 (632)
Q Consensus 27 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~--------------- 90 (632)
|+|+. +|+.|.+|+.+ |..|+||+.||.... . ..|.|++|+ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~---~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG--M---DPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC--C---SSEECTTCC--HHHHHHHHHHHHHHTTCC------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC--C---CceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccc
Confidence 67776 78999999997 899999999998632 2 479999996 599999999999755
Q ss_pred -----------cccCcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhh
Q 006765 91 -----------VEFTPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVL 132 (632)
Q Consensus 91 -----------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 132 (632)
+.++.+++..|+.||.||+|.. |++.|+.|+...+-
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 122 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHc
Confidence 7899999999999999999998 99999999999873
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.86 E-value=2e-10 Score=109.23 Aligned_cols=93 Identities=15% Similarity=0.270 Sum_probs=51.7
Q ss_pred EEEEE-CCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCc---------------
Q 006765 27 ITVIV-EGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHR--------------- 90 (632)
Q Consensus 27 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~--------------- 90 (632)
|+|.. +|+.|.+|+.+ |..|+||+.||..... ...|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 78 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV----DNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAAT 78 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC----------------CCTTSC--HHHHHHHHHC--------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC----CCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccc
Confidence 66665 79999999998 8999999999976422 2478899996 599999999999865
Q ss_pred ------------cccCcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhhh
Q 006765 91 ------------VEFTPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNVL 132 (632)
Q Consensus 91 ------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 132 (632)
+.++..++..|+.||.||+|.. |++.|+.|+...+-
T Consensus 79 ~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 79 SDDDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMIK 126 (160)
T ss_dssp ----------------------CHHHHHHTTCHH------HHHHHHHHHHHTTT
T ss_pred ccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 5789999999999999999998 99999999999883
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.29 E-value=1e-06 Score=77.41 Aligned_cols=80 Identities=15% Similarity=0.209 Sum_probs=66.1
Q ss_pred eEEEEE-CCEEEEeeccccccccHHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCc--------------
Q 006765 26 DITVIV-EGINFHLHKFPLVSKCAKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHR-------------- 90 (632)
Q Consensus 26 DV~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~-------------- 90 (632)
-|+|.- +|+.|.+|+.+ |..|++|+.|+..+.+.. ...|.|++|+ +.+++.|++|||.-+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~--~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRES--KGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPE 79 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTC--TTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccC--CCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCC
Confidence 367776 89999999996 889999999998743221 3589999995 599999999999532
Q ss_pred cccCcchHHHHHHHhhhhcC
Q 006765 91 VEFTPRNIVTVYAAADYLEM 110 (632)
Q Consensus 91 i~it~~NV~~L~cAA~~LqM 110 (632)
..+...++..|+.||.||++
T Consensus 80 w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 FEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHCC
T ss_pred ccCCHHHHHHHHHHHHHhCc
Confidence 36788899999999999985
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.25 E-value=1.3e-06 Score=83.80 Aligned_cols=97 Identities=11% Similarity=0.233 Sum_probs=77.5
Q ss_pred eEEEEE-CCEEEEeeccccccccHHHHHhhhcccCC---CCccceEEecCCCCCHHHHHHHHHhhcCCc-----------
Q 006765 26 DITVIV-EGINFHLHKFPLVSKCAKIARIYEESQST---HIKTFTTELEDFPGGPGTFLIAAKFCYGHR----------- 90 (632)
Q Consensus 26 DV~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~---~~~~~~v~L~d~pggae~Felv~~FcYg~~----------- 90 (632)
-|+|+- +|+.|.+++.+ |..|++++.|+...... ......|.|++|+ +.+++.|++|||-.+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466665 79999999996 78899999999864211 0013579999996 599999999998522
Q ss_pred --------------cccCcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhh
Q 006765 91 --------------VEFTPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNV 131 (632)
Q Consensus 91 --------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 131 (632)
+.+....+..|+.||.||+|.. |++.|+.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 4677889999999999999998 9999999998876
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.23 E-value=1.1e-06 Score=76.78 Aligned_cols=80 Identities=14% Similarity=0.270 Sum_probs=63.9
Q ss_pred EEEEE-CCEEEEeeccccccccHHHHHhhhcc-c-CCCCccceEEecCCCCCHHHHHHHHHhhcCCc-----------cc
Q 006765 27 ITVIV-EGINFHLHKFPLVSKCAKIARIYEES-Q-STHIKTFTTELEDFPGGPGTFLIAAKFCYGHR-----------VE 92 (632)
Q Consensus 27 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~-~-e~~~~~~~v~L~d~pggae~Felv~~FcYg~~-----------i~ 92 (632)
|++.- +|+.|.+|+.+ |..|++|+.|+... . .+. ....|.|++|+ +.+++.|++|||.-+ ..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~-~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN-ETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccc-cCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcc
Confidence 56665 89999999996 88999999999863 2 111 13589999995 599999999999532 46
Q ss_pred cCcchHHHHHHHhhhhcC
Q 006765 93 FTPRNIVTVYAAADYLEM 110 (632)
Q Consensus 93 it~~NV~~L~cAA~~LqM 110 (632)
+..+++..|+.||.||++
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 888999999999999985
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.62 E-value=3.8e-05 Score=68.92 Aligned_cols=82 Identities=12% Similarity=0.218 Sum_probs=63.1
Q ss_pred eEEEE-ECCEEEEeeccccccccHHHHHhhhcccC-CCCccceEEecCCCCCHHHHHHHHHhhcCCc-----------cc
Q 006765 26 DITVI-VEGINFHLHKFPLVSKCAKIARIYEESQS-THIKTFTTELEDFPGGPGTFLIAAKFCYGHR-----------VE 92 (632)
Q Consensus 26 DV~v~-V~~~~F~lHK~vLas~S~yfr~lf~~~~e-~~~~~~~v~L~d~pggae~Felv~~FcYg~~-----------i~ 92 (632)
-|+|+ -+|+.|.+++. .|..|+.++.|+..... .......|.|++|+ +.+++.|++|||--+ ..
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 35666 48999999998 57899999999986321 11113579999995 599999999998422 36
Q ss_pred cCcchHHHHHHHhhhhcC
Q 006765 93 FTPRNIVTVYAAADYLEM 110 (632)
Q Consensus 93 it~~NV~~L~cAA~~LqM 110 (632)
+...++..|+.||.||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 888999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.56 E-value=0.00027 Score=62.58 Aligned_cols=94 Identities=14% Similarity=0.145 Sum_probs=73.1
Q ss_pred eEEEEECCEEEEeecccccccc-HHHHHhhhcccC----CCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc-chHH
Q 006765 26 DITVIVEGINFHLHKFPLVSKC-AKIARIYEESQS----THIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP-RNIV 99 (632)
Q Consensus 26 DV~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~e----~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~-~NV~ 99 (632)
=|+|.|||+.|...+..|.... .+|.+||..... .+ ...++-| |- .|+.|+.|++|..+|++.+.. -.+.
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d-~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~ 82 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKD-ETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEE 82 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBC-TTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCC-CCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHH
Confidence 4788999999999999999875 578999875311 11 1245554 44 679999999999999998744 3457
Q ss_pred HHHHHhhhhcCCCCCCcchHHHHHHHHHHH
Q 006765 100 TVYAAADYLEMTDEDDEDNLVSQSESFFHK 129 (632)
Q Consensus 100 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 129 (632)
.++..|+|.++++ |++.|++-+.+
T Consensus 83 ~l~~Ea~fy~l~~------L~~~l~~~i~~ 106 (107)
T 3drz_A 83 GVLEEAEFYNITS------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHHCCCHH------HHHHHHHHHhc
Confidence 8999999999998 99999876543
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.16 E-value=0.0092 Score=58.76 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=73.4
Q ss_pred eEEEEECCEEEEeecccccccc-HHHHHhhhcccC----CCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc-chHH
Q 006765 26 DITVIVEGINFHLHKFPLVSKC-AKIARIYEESQS----THIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP-RNIV 99 (632)
Q Consensus 26 DV~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~e----~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~-~NV~ 99 (632)
=|+|.|||..|...+..|.... .+|.+||..... .+ ....+-| |- .|..|+.|++|.-+|++.+.. -.+.
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~D-e~geyFI-DR--DP~~F~~ILnyLRtG~L~lP~~~~~~ 88 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKD-ETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEE 88 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BC-TTCCEEE-CS--CSTTHHHHHHHHHHSCCCCCTTSCHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccC-CCccEEe-cC--ChHHHHHHHHHhcCCccCCCCCCCHH
Confidence 3678999999999999998764 488999875311 11 1245554 33 568999999999999998743 3446
Q ss_pred HHHHHhhhhcCCCCCCcchHHHHHHHHHHHhh
Q 006765 100 TVYAAADYLEMTDEDDEDNLVSQSESFFHKNV 131 (632)
Q Consensus 100 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 131 (632)
.++.-|+|.++++ |++.|+.-+.+.-
T Consensus 89 ~l~eEA~FygL~~------Lv~~l~~~i~ere 114 (202)
T 3drx_A 89 GVLEEAEFYNITS------LIKLVKDKIRERD 114 (202)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcHH------HHHHHHHHHHHHh
Confidence 7999999999998 9999988887543
No 31
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.32 E-value=0.0054 Score=55.13 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=61.6
Q ss_pred EEEEECCEEEEeecccccccc-HHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc-chHHHHHHH
Q 006765 27 ITVIVEGINFHLHKFPLVSKC-AKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP-RNIVTVYAA 104 (632)
Q Consensus 27 V~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~-~NV~~L~cA 104 (632)
|+|.|||+.|...+..|.... ..|.+|+......+....++-|. -.|..|+.|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD---RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC---SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe---cChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 789999999999999988763 34666765421111113456543 3568999999999999998755 357889999
Q ss_pred hhhhcCCC
Q 006765 105 ADYLEMTD 112 (632)
Q Consensus 105 A~~LqMte 112 (632)
|+|.++++
T Consensus 84 a~fy~i~~ 91 (115)
T 3kvt_A 84 LEFWGLDS 91 (115)
T ss_dssp HHHHTCCG
T ss_pred HHHhCCCh
Confidence 99999997
No 32
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.80 E-value=0.014 Score=51.06 Aligned_cols=36 Identities=19% Similarity=0.104 Sum_probs=31.1
Q ss_pred cccccCChHHHHHHHHHHHhcCCChhhHHHHHHHHHHhh
Q 006765 214 EDLSYLSVGLFERLIKTMEARGMRPENLAGAIMYYARKY 252 (632)
Q Consensus 214 EDl~~Ls~~lf~rvI~am~~~g~~~e~I~~aL~~Yakk~ 252 (632)
+||..||.+.+..+|+.. ..+++.|.++++.|+++.
T Consensus 47 ~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~d 82 (105)
T 2eqx_A 47 EEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINFN 82 (105)
T ss_dssp HHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHTT
T ss_pred ccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHcC
Confidence 688899999999999985 557789999999999654
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=93.89 E-value=0.058 Score=47.23 Aligned_cols=83 Identities=10% Similarity=0.058 Sum_probs=57.8
Q ss_pred EEEEECCEEEEeecccccccc-HHHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcC-CccccCc-chHHHHHH
Q 006765 27 ITVIVEGINFHLHKFPLVSKC-AKIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYG-HRVEFTP-RNIVTVYA 103 (632)
Q Consensus 27 V~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg-~~i~it~-~NV~~L~c 103 (632)
|+|.|||+.|...+..|...- ..|.+|+.....-+....++-|. -.|+.|+.|++|.-+ |++.+.. -.+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiD---Rdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFD---RNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEEC---SCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEc---CChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999998886542 23444554211100012456552 246899999999997 8987643 35678999
Q ss_pred HhhhhcCCC
Q 006765 104 AADYLEMTD 112 (632)
Q Consensus 104 AA~~LqMte 112 (632)
-|+|.++++
T Consensus 80 Ea~fy~i~~ 88 (100)
T 1t1d_A 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999987
No 34
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.39 E-value=0.065 Score=48.68 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=57.0
Q ss_pred eEEEEECCEEEEeeccccccccHHHHHhhhcc-cC--CCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc-chHHHH
Q 006765 26 DITVIVEGINFHLHKFPLVSKCAKIARIYEES-QS--THIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP-RNIVTV 101 (632)
Q Consensus 26 DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e--~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~-~NV~~L 101 (632)
=|+|.|||..|..-+..|...-+- |+... .. .......+-| .-.|+.|+.|++|.-+|++.+.. -.+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 478899999999998887654321 22221 10 0001245554 33679999999999999998754 357889
Q ss_pred HHHhhhhcCCC
Q 006765 102 YAAADYLEMTD 112 (632)
Q Consensus 102 ~cAA~~LqMte 112 (632)
+.-|+|.++++
T Consensus 88 ~~Ea~fy~i~~ 98 (124)
T 1s1g_A 88 DDELAFYGILP 98 (124)
T ss_dssp HHHHHHTTCCG
T ss_pred HHHHHHcCCCh
Confidence 99999999997
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=92.41 E-value=0.053 Score=47.79 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=56.1
Q ss_pred EEEEECCEEEEeeccccccccHHHHHhhhcc-cC--CCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc-chHHHHH
Q 006765 27 ITVIVEGINFHLHKFPLVSKCAKIARIYEES-QS--THIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP-RNIVTVY 102 (632)
Q Consensus 27 V~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e--~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~-~NV~~L~ 102 (632)
|+|.|||+.|...+..|....+- |+... .. .......+-|. -.|+.|+.|++|.-+|++.+.. -.+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~FiD---Rdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFFD---RDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEEC---SCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEEe---CCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78999999999998877654321 22221 00 00012455543 2568999999999999987654 3578899
Q ss_pred HHhhhhcCCC
Q 006765 103 AAADYLEMTD 112 (632)
Q Consensus 103 cAA~~LqMte 112 (632)
.-|+|.++++
T Consensus 76 ~Ea~fy~i~~ 85 (105)
T 1nn7_A 76 EELAFFGLIP 85 (105)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHcCCCH
Confidence 9999999998
No 36
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=91.71 E-value=0.08 Score=49.14 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=58.0
Q ss_pred CeeEEEEECCEEEEeeccccccccHHHHHhhhcc-cC--CCCccceEEecCCCCCHHHHHHHHHhhcCCccccCc-chHH
Q 006765 24 PSDITVIVEGINFHLHKFPLVSKCAKIARIYEES-QS--THIKTFTTELEDFPGGPGTFLIAAKFCYGHRVEFTP-RNIV 99 (632)
Q Consensus 24 ~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e--~~~~~~~v~L~d~pggae~Felv~~FcYg~~i~it~-~NV~ 99 (632)
..=|+|.|||+.|...+..|...-+- |+... .. ......++-| .-.++.|+.|++|.-+|++.+.. -.+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~S---~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTTS---TTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCCe---eecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 34578899999999998887654321 22221 10 0001245554 33679999999999999988754 3578
Q ss_pred HHHHHhhhhcCCC
Q 006765 100 TVYAAADYLEMTD 112 (632)
Q Consensus 100 ~L~cAA~~LqMte 112 (632)
.++.-|+|.++++
T Consensus 108 ~l~eEa~fy~i~~ 120 (140)
T 2nz0_B 108 AYDDELAFYGILP 120 (140)
T ss_dssp HHHHHHHHHTCCG
T ss_pred HHHHHHHHcCCCh
Confidence 8999999999997
No 37
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=83.07 E-value=1.7 Score=33.12 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=30.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHhhhc
Q 006765 538 ENHGLKVDMDKMRSRVGELEEEFGKIKQEMKRVTK 572 (632)
Q Consensus 538 en~~Lk~e~~~mr~Rv~eLEkec~~mk~~~~k~~k 572 (632)
....||.-.+.+-+||.+||..|..+.|||+++.+
T Consensus 5 ~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 5 QILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 45567888899999999999999999999998754
No 38
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=79.94 E-value=2.8 Score=32.13 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=34.7
Q ss_pred chhhhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHhh
Q 006765 532 WVTVARENHGLKVDMDKMRSRVGELEEEFGKIKQEMKRV 570 (632)
Q Consensus 532 ~~~~~ren~~Lk~e~~~mr~Rv~eLEkec~~mk~~~~k~ 570 (632)
.+.+..||-.||.|++.=...++.||.|-+.||.-+..+
T Consensus 12 Ve~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 12 VEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 346789999999999999999999999999999887654
No 39
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=75.47 E-value=3.1 Score=32.29 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=25.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhHHHHHh
Q 006765 538 ENHGLKVDMDKMRSRVGELEEEFGKIKQEMKR 569 (632)
Q Consensus 538 en~~Lk~e~~~mr~Rv~eLEkec~~mk~~~~k 569 (632)
+.+.||.|++.+|.|+.+|.+++..++..+.+
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56778888888888888888888888887764
No 40
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=63.10 E-value=2 Score=28.55 Aligned_cols=16 Identities=50% Similarity=0.601 Sum_probs=13.8
Q ss_pred chHHHHHHHhhhhcCC
Q 006765 96 RNIVTVYAAADYLEMT 111 (632)
Q Consensus 96 ~NV~~L~cAA~~LqMt 111 (632)
.||+.|+.||+||+=-
T Consensus 3 ~nvq~LLeAAeyLErr 18 (26)
T 1pd7_B 3 MNIQMLLEAADYLERR 18 (26)
T ss_dssp CSTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5999999999999843
No 41
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=61.33 E-value=8.6 Score=42.46 Aligned_cols=84 Identities=7% Similarity=0.021 Sum_probs=55.9
Q ss_pred eEEEEECCEEEEeeccccccccH-HHHHhhhcccCCCCccceEEecCCCCCHHHHHHHHHhhcC-CccccCc-chHHHHH
Q 006765 26 DITVIVEGINFHLHKFPLVSKCA-KIARIYEESQSTHIKTFTTELEDFPGGPGTFLIAAKFCYG-HRVEFTP-RNIVTVY 102 (632)
Q Consensus 26 DV~v~V~~~~F~lHK~vLas~S~-yfr~lf~~~~e~~~~~~~v~L~d~pggae~Felv~~FcYg-~~i~it~-~NV~~L~ 102 (632)
=|+|.|||..|...+..|...-+ .+-+++.....-+....++-+ .-.|+.|+.+++|..+ |++.+.. -.+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 46789999999999887754321 122222211100001245554 3367999999999998 9987643 3466788
Q ss_pred HHhhhhcCCC
Q 006765 103 AAADYLEMTD 112 (632)
Q Consensus 103 cAA~~LqMte 112 (632)
.-|+|.++.+
T Consensus 130 ~E~~f~~i~~ 139 (514)
T 2r9r_B 130 EEIRFYELGE 139 (514)
T ss_dssp HHHHHTTCCH
T ss_pred HHHHhcCCCH
Confidence 9999999987
No 42
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=61.31 E-value=10 Score=29.68 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=26.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhHHHHHhhhc
Q 006765 540 HGLKVDMDKMRSRVGELEEEFGKIKQEMKRVTK 572 (632)
Q Consensus 540 ~~Lk~e~~~mr~Rv~eLEkec~~mk~~~~k~~k 572 (632)
..||.-=.++-.+|.+||..|+.|-|||+++.+
T Consensus 14 ~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 14 LRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555566778999999999999999998864
No 43
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=48.36 E-value=12 Score=33.20 Aligned_cols=33 Identities=15% Similarity=0.014 Sum_probs=24.7
Q ss_pred HhccCCCCChhhHHHHHHhcCCCCCCcchhHHHHHHHHHHhCCC
Q 006765 404 EVASDVNLKPGKIRSLAVALPDSSRPFHDGLYRALDIYFQAHPW 447 (632)
Q Consensus 404 EvA~D~nL~~~kF~~Lae~lPd~aR~~~DgLYrAIDiYLK~Hp~ 447 (632)
|...|.+.+|.++.+.+ .|+++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 34567778888886654 6889999999999983
No 44
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=43.32 E-value=23 Score=30.51 Aligned_cols=25 Identities=28% Similarity=0.383 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHH
Q 006765 544 VDMDKMRSRVGELEEEFGKIKQEMK 568 (632)
Q Consensus 544 ~e~~~mr~Rv~eLEkec~~mk~~~~ 568 (632)
.||+.||..|-+||..+..||+..+
T Consensus 50 ~Emq~Ir~tvyeLE~~h~kmKq~YE 74 (92)
T 3vp9_A 50 AEMQQIRNTVYERELTHRKMKDAYE 74 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5699999999999999999998664
No 45
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=41.50 E-value=20 Score=27.67 Aligned_cols=31 Identities=10% Similarity=0.075 Sum_probs=27.0
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 006765 531 GWVTVARENHGLKVDMDKMRSRVGELEEEFG 561 (632)
Q Consensus 531 ~~~~~~ren~~Lk~e~~~mr~Rv~eLEkec~ 561 (632)
.+..+.+||++||..++.++.++.||.+...
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677899999999999999999999987653
No 46
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=33.99 E-value=36 Score=28.16 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=28.2
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHH
Q 006765 535 VARENHGLKVDMDKMRSRVGELEEEFGKIKQEM 567 (632)
Q Consensus 535 ~~ren~~Lk~e~~~mr~Rv~eLEkec~~mk~~~ 567 (632)
++.|-+.||..+..+-.|+..||.|+.-+|+-.
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 466788899999999999999999998887764
No 47
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=29.74 E-value=73 Score=25.17 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=22.4
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 006765 535 VARENHGLKVDMDKMRSRVGELEEEFGKIKQEMK 568 (632)
Q Consensus 535 ~~ren~~Lk~e~~~mr~Rv~eLEkec~~mk~~~~ 568 (632)
+..+.+.|+.+-+.++.+|..|++|...+|+-|.
T Consensus 28 le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~ 61 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERADSLAKEIQYLKDLIE 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555666666667777777777777776666553
No 48
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=28.20 E-value=78 Score=26.57 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=22.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 006765 533 VTVARENHGLKVDMDKMRSRVGELEEE 559 (632)
Q Consensus 533 ~~~~ren~~Lk~e~~~mr~Rv~eLEke 559 (632)
....+..+.|-.||...|.||.|||.|
T Consensus 15 ee~~~~~E~L~qEi~~Lr~kv~elEnE 41 (81)
T 3qh9_A 15 EEKQRKAEELLQELRHLKIKVEELENE 41 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 445566778889999999999999965
No 49
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=25.87 E-value=65 Score=26.98 Aligned_cols=43 Identities=14% Similarity=0.333 Sum_probs=32.5
Q ss_pred CcccchHHHHHHHHHHhcccccccCCCCCCcccccCCCchhhhHHHHHHHHHHHHh
Q 006765 350 DTLYNTDCVERIFHHFMTSETIITSFSPASADVETSSSSGSLRKVSKLIDSYIAEV 405 (632)
Q Consensus 350 ~tlyDvd~V~ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~l~~VakLvD~YLaEv 405 (632)
+..++-+++.||+..+...... .-+..++..||+++|-|..|.
T Consensus 6 ~~~~~~~lI~ril~~~f~~~kt-------------rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 6 EGGFRKETVERLLRLHFRDGRT-------------RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp -CCCCHHHHHHHHHHHCCSTTC-------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhccCcc-------------cccHHHHHHHHHHHHHHHHHH
Confidence 4567899999999987654321 124578999999999999984
No 50
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=22.37 E-value=70 Score=28.71 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=35.5
Q ss_pred HHHHHHHhhcCCccccCcchHHHHHHHhhhhcCCCCCCcchHHHHHHHHHHHhh
Q 006765 78 TFLIAAKFCYGHRVEFTPRNIVTVYAAADYLEMTDEDDEDNLVSQSESFFHKNV 131 (632)
Q Consensus 78 ~Felv~~FcYg~~i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 131 (632)
..+.+.+|+-. .++++|+..++..|+..+.++ |.+.|..|+.++.
T Consensus 120 l~~~c~~~l~~---~l~~~n~~~~~~~A~~~~~~~------L~~~~~~~i~~~~ 164 (172)
T 3htm_A 120 LKVMCEDALCS---NLSVENAAEILILADLHSADQ------LKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHHHHHHH---TCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHH---hCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 33444444432 578999999999999999988 9999999998865
No 51
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=22.35 E-value=96 Score=25.46 Aligned_cols=29 Identities=21% Similarity=0.325 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhh
Q 006765 542 LKVDMDKMRSRVGELEEEFGKIKQEMKRV 570 (632)
Q Consensus 542 Lk~e~~~mr~Rv~eLEkec~~mk~~~~k~ 570 (632)
|..|.+..+..+.+||.+...+|.+|+..
T Consensus 3 l~~e~~~~~~~i~~lE~eL~~~r~e~~~q 31 (74)
T 2xv5_A 3 SARERDTSRRLLAEKEREMAEMRARMQQQ 31 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567777888888888887777777654
Done!