Query 006766
Match_columns 632
No_of_seqs 149 out of 215
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 08:23:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yrx_A Hypothetical protein RS 96.4 0.0078 2.7E-07 54.8 7.8 85 517-632 30-114 (121)
2 2iyg_A APPA, antirepressor of 95.4 0.03 1E-06 51.2 7.0 79 516-613 41-119 (124)
3 2hfn_A Synechocystis photorece 94.8 0.053 1.8E-06 51.0 6.9 84 516-618 31-118 (153)
4 1x0p_A Hypothetical protein TL 94.7 0.029 1E-06 52.1 5.0 83 517-618 29-115 (143)
5 2byc_A Blue-light receptor of 93.6 0.095 3.3E-06 48.6 6.0 72 517-607 31-102 (137)
6 3gfz_A Klebsiella pneumoniae B 88.1 0.89 3E-05 48.1 7.5 85 518-622 37-126 (413)
7 2lxf_A Uncharacterized protein 78.1 3 0.0001 37.9 5.5 61 494-554 30-92 (121)
8 2vh7_A Acylphosphatase-1; hydr 75.1 4.8 0.00016 34.8 5.8 49 507-555 18-67 (99)
9 1aps_A Acylphosphatase; hydrol 73.0 6.4 0.00022 34.0 6.0 54 501-554 10-65 (98)
10 1ulr_A Putative acylphosphatas 67.6 3.7 0.00013 34.8 3.3 46 510-555 15-61 (88)
11 2fhm_A Probable acylphosphatas 67.2 3.7 0.00013 34.9 3.2 46 511-556 16-62 (91)
12 2gv1_A Probable acylphosphatas 66.7 3.5 0.00012 35.2 3.0 49 507-555 14-63 (92)
13 1urr_A CG18505 protein; acylph 65.5 3.7 0.00013 35.8 2.9 51 506-556 20-71 (102)
14 1w2i_A Acylphosphatase; hydrol 63.1 3.6 0.00012 35.1 2.3 47 508-554 15-62 (91)
15 3trg_A Acylphosphatase; fatty 62.9 3.9 0.00013 35.6 2.5 50 506-555 21-71 (98)
16 2bjd_A Acylphosphatase; hypert 62.5 4.4 0.00015 35.4 2.9 49 506-554 23-72 (101)
17 3itf_A Periplasmic adaptor pro 56.6 52 0.0018 30.6 9.1 81 389-481 40-125 (145)
18 3zs9_C Golgi to ER traffic pro 55.4 8.4 0.00029 28.8 2.8 20 394-413 3-22 (38)
19 1f32_A Major pepsin inhibitor 55.0 8.7 0.0003 36.1 3.5 36 395-430 96-144 (149)
20 2kxh_B Peptide of FAR upstream 47.1 15 0.00051 26.3 2.9 16 145-160 10-25 (31)
21 3o39_A Periplasmic protein rel 45.8 59 0.002 28.9 7.3 78 389-482 12-98 (108)
22 3sjd_D Golgi to ER traffic pro 44.3 18 0.00061 28.0 3.2 24 391-414 10-33 (46)
23 1gxu_A Hydrogenase maturation 43.5 11 0.00038 32.2 2.2 38 506-544 16-54 (91)
24 2kne_B CAM, ATPase, Ca++ trans 34.2 20 0.00068 25.2 1.9 24 30-53 4-27 (28)
25 3oeo_A Spheroplast protein Y; 29.3 47 0.0016 30.3 4.1 81 389-481 28-113 (138)
26 2ksw_A Oryctin; kazal-type, pr 22.2 71 0.0024 25.6 3.3 28 524-552 15-42 (66)
27 3plv_C 66 kDa U4/U6.U5 small n 20.1 48 0.0016 21.9 1.6 12 417-428 10-21 (21)
No 1
>1yrx_A Hypothetical protein RSPH03001874; ferredoxin-like fold, flavin binding, photoreceptor, transcr; HET: FMN D9G; 2.30A {Rhodobacter sphaeroides 2} SCOP: d.58.10.2 PDB: 2bun_A*
Probab=96.41 E-value=0.0078 Score=54.83 Aligned_cols=85 Identities=16% Similarity=0.295 Sum_probs=66.8
Q ss_pred ccccccccceeEEEecCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCcccCCCCCCCeeEEEEeeecCCCCCC
Q 006766 517 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 596 (632)
Q Consensus 517 d~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 596 (632)
..|=.+.++||+-+++.+.-+=|.||.+.++.. |+ .||.=+. .-..|..+-.|.+.+|.|.
T Consensus 30 r~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---Ly-~rI~~D~---------------RH~~v~~l~~~~i~~R~F~ 90 (121)
T 1yrx_A 30 QAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE---VM-THIQRDR---------------RHSNVEILAEEPIAKRRFA 90 (121)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH---HH-HHHHTCT---------------TEEEEEEEEEEEESSCSCS
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEecCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEeeeccccccC
Confidence 456678999999999999999999999999975 33 5665332 2346889999999999999
Q ss_pred CeeeEecCCHHHHHHHHHhcCcchHHHHHhcccCCC
Q 006766 597 RFFVHECMTEAAAKKVFADAGVAHYWDLAVNFNDEI 632 (632)
Q Consensus 597 ~w~~k~c~te~~Are~L~~~~vehYWDlA~~~~~~~ 632 (632)
+|.|.....+. ..|.++..++.+|
T Consensus 91 ~WsM~~~~~~~------------~~~~l~~~~~~~~ 114 (121)
T 1yrx_A 91 GWHMQLSCSEA------------DMRSLGLAESRQI 114 (121)
T ss_dssp SEEEEECCCHH------------HHHHTTCCCCCCC
T ss_pred CCcccccchHH------------HHHhhcccchhhh
Confidence 99999998774 4566666666554
No 2
>2iyg_A APPA, antirepressor of PPSR, sensor of blue light; signal transduction; HET: FMN; 2.3A {Rhodobacter sphaeroides} PDB: 2iyi_A*
Probab=95.41 E-value=0.03 Score=51.24 Aligned_cols=79 Identities=15% Similarity=0.274 Sum_probs=64.0
Q ss_pred cccccccccceeEEEecCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCcccCCCCCCCeeEEEEeeecCCCCC
Q 006766 516 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF 595 (632)
Q Consensus 516 Vd~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F 595 (632)
-..|-.+.++||+-+++.+.-+=|.||.+.++.. |+ .||.=+. .-..|..+-.|.+.+|.|
T Consensus 41 ar~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---Ly-~rI~~D~---------------RH~~v~~L~~~~i~~R~F 101 (124)
T 2iyg_A 41 SQAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE---VM-THIQRDR---------------RHSNVEILAEEPIAKRRF 101 (124)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH---HH-HHHHHCT---------------TEEEEEEEEEEECSSCSS
T ss_pred HHHhhhhcCCEEEEEEcCCEEEEEeeCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEeeecccCcc
Confidence 3456678999999999999999999999999975 33 5664332 224688999999999999
Q ss_pred CCeeeEecCCHHHHHHHH
Q 006766 596 NRFFVHECMTEAAAKKVF 613 (632)
Q Consensus 596 ~~w~~k~c~te~~Are~L 613 (632)
.+|.|..+..+.+.+.+.
T Consensus 102 ~~WsM~~~~~~~~~~~l~ 119 (124)
T 2iyg_A 102 AGWHMQLSCSEADMRSLG 119 (124)
T ss_dssp TTCSSEEECCHHHHHHHH
T ss_pred CCCcccccchhHHHHHHh
Confidence 999999999888776654
No 3
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=94.78 E-value=0.053 Score=50.97 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=66.3
Q ss_pred cccccccccceeEEEecCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCcccCCCCCCCeeEEEEeeecCCCCC
Q 006766 516 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF 595 (632)
Q Consensus 516 Vd~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F 595 (632)
-..|=.+.++||+-+++.+.-+=|.||.+.++.. |+ .||.=+. .-..|..+-.|.+.+|.|
T Consensus 31 a~~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---l~-~rI~~D~---------------RH~~v~~l~~~~i~~R~F 91 (153)
T 2hfn_A 31 SQRNNPANGITGLLCYSKPAFLQVLEGECEQVNE---TY-HRIVQDE---------------RHHSPQIIECMPIRRRNF 91 (153)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH---HH-HHHHTCT---------------TEEEEEEEEEEECSSCSS
T ss_pred HHHhhhhcCcEEEEEEeCCEEEEEeeCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEecccCCCcc
Confidence 3456678999999999999999999999999975 33 5665332 234688999999999999
Q ss_pred CCeeeEecCCH----HHHHHHHHhcCc
Q 006766 596 NRFFVHECMTE----AAAKKVFADAGV 618 (632)
Q Consensus 596 ~~w~~k~c~te----~~Are~L~~~~v 618 (632)
.+|.|....-+ ......|.+++.
T Consensus 92 ~~W~M~~~~~~~~~~~~~~~~~~~~~~ 118 (153)
T 2hfn_A 92 EVWSMQAITVNDLSTEQVKTLVLKYSG 118 (153)
T ss_dssp TTCSCEEEECSTTSCHHHHHHHHHTSS
T ss_pred CCCcCeeecccccchhHHHHHHHhccc
Confidence 99999987766 666777766543
No 4
>1x0p_A Hypothetical protein TLL0078; BLUF, FAD, structural genomics, electron transport; HET: FAD; 2.00A {Thermosynechococcus elongatus} SCOP: d.58.10.2
Probab=94.75 E-value=0.029 Score=52.11 Aligned_cols=83 Identities=13% Similarity=0.159 Sum_probs=65.1
Q ss_pred ccccccccceeEEEecCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCcccCCCCCCCeeEEEEeeecCCCCCC
Q 006766 517 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 596 (632)
Q Consensus 517 d~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 596 (632)
..|-.+.++||+-+++.+.-+=|.||.+.++.. |+ .||.=+. .-..|..+-.|.+.+|.|.
T Consensus 29 ~~~N~~~~ITG~Ll~~~g~F~Q~LEG~~~~V~~---l~-~rI~~D~---------------RH~~v~~l~~~~i~~R~F~ 89 (143)
T 1x0p_A 29 EVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSE---TY-ARILKDP---------------RHHSAEIVEFKAIEERTFI 89 (143)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH---HH-HHHHTCT---------------TEEEEEEEEEEECSSCSSC
T ss_pred HHhhhhcCCEEEEEEcCCEEEEEecCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEeeeccccccC
Confidence 456678999999999999999999999999975 33 5665332 2246888999999999999
Q ss_pred CeeeEecCCHH----HHHHHHHhcCc
Q 006766 597 RFFVHECMTEA----AAKKVFADAGV 618 (632)
Q Consensus 597 ~w~~k~c~te~----~Are~L~~~~v 618 (632)
+|.|....-+. .....|.+++.
T Consensus 90 ~W~M~~~~~~~~~~~~~~~~~~~~~~ 115 (143)
T 1x0p_A 90 NWSMRLVQLGEMDSDTIRRLRLKYSP 115 (143)
T ss_dssp SCSCCEEEGGGSCHHHHHHHHHHTCS
T ss_pred CCcceeecccccchHHHHHHHHhccc
Confidence 99998776555 66677766544
No 5
>2byc_A Blue-light receptor of the BLUF-family; signaling protein, photoreceptor, flavin; HET: FMN; 1.9A {Rhodobacter sphaeroides} SCOP: d.58.10.2
Probab=93.63 E-value=0.095 Score=48.58 Aligned_cols=72 Identities=14% Similarity=0.083 Sum_probs=58.6
Q ss_pred ccccccccceeEEEecCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCcccCCCCCCCeeEEEEeeecCCCCCC
Q 006766 517 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 596 (632)
Q Consensus 517 d~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 596 (632)
..|=.+.++||+-+++.+.-+=|.||.+.++.. |+ .||.=+. .-..|..+-.|.+.+|.|+
T Consensus 31 r~~N~~~gITG~Ll~~~g~F~QvLEG~~~~V~~---L~-~rI~~D~---------------RH~~v~~L~~~~i~~R~F~ 91 (137)
T 2byc_A 31 RVRNLRLGITGILLYNGVHFVQTIEGPRSACDE---LF-RLISADP---------------RHQEILAFDLEPITARRFP 91 (137)
T ss_dssp HHHHHHHTCEEEEEECSSEEEEEEEEEHHHHHH---HH-HHHHTCT---------------TEEEEEEEEEEECSSCSST
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEeeCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEecccCCCcCC
Confidence 456678999999999999999999999999975 33 5664332 2346999999999999999
Q ss_pred CeeeEecCCHH
Q 006766 597 RFFVHECMTEA 607 (632)
Q Consensus 597 ~w~~k~c~te~ 607 (632)
+|.|....-+.
T Consensus 92 ~W~M~~~~~~~ 102 (137)
T 2byc_A 92 DWSMRIVSRKE 102 (137)
T ss_dssp TCSCEEECHHH
T ss_pred CCcCccccccc
Confidence 99999877653
No 6
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=88.14 E-value=0.89 Score=48.06 Aligned_cols=85 Identities=14% Similarity=0.070 Sum_probs=61.2
Q ss_pred cccccccceeEEEecCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCcccCCCCCCCeeEEEEeeecCCCCCCC
Q 006766 518 VNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFNR 597 (632)
Q Consensus 518 ~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~~ 597 (632)
.|-.+.++||+-+++.+.-+=|.||.+.++.. | ..||.=+. .-..|..+-.|.+..|.|.+
T Consensus 37 ~~N~~~~itG~L~~~~~~F~Q~lEG~~~~v~~---l-~~~I~~D~---------------RH~~v~~l~~~~~~~r~F~~ 97 (413)
T 3gfz_A 37 SKNLPLGITGILLFNGLQFFQVLEGTEEALES---L-FSEIQSDP---------------RHRDVVELMRDYSAYRRFHG 97 (413)
T ss_dssp HHHGGGTCEEEEEECSSEEEEEEEEEHHHHHH---H-HHHHHTCT---------------TCEEEEEEEEEECSSCSSTT
T ss_pred HhccccCcEEEEEEeCCEEEEEEeCCHHHHHH---H-HHHHhcCC---------------CcCCeEEEEEeecCcccCCC
Confidence 56678999999999999999999999999985 3 35665332 23468899999999999999
Q ss_pred eeeEec-----CCHHHHHHHHHhcCcchHH
Q 006766 598 FFVHEC-----MTEAAAKKVFADAGVAHYW 622 (632)
Q Consensus 598 w~~k~c-----~te~~Are~L~~~~vehYW 622 (632)
|.|... .++.....+| +++-.+|+
T Consensus 98 w~M~~~~l~~~~~~~~~~~i~-~~~~~~~~ 126 (413)
T 3gfz_A 98 TGMRILDLRLFETDGALEEIL-RFSTFGVT 126 (413)
T ss_dssp CSCCEEEGGGSCTTHHHHHHH-HHCC----
T ss_pred cchhhccccccChHHHHHHHH-hhCCcccc
Confidence 999875 2333333444 55555554
No 7
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=78.09 E-value=3 Score=37.90 Aligned_cols=61 Identities=18% Similarity=0.186 Sum_probs=50.1
Q ss_pred CCceEEEEEEEcCC-CCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHH
Q 006766 494 SVETIVSVYKINDL-SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 554 (632)
Q Consensus 494 ~~gv~~aVyrV~~L-snP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM 554 (632)
+..+....|+|.=. .-=--|+-+...|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 30 ~~di~t~~frV~G~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~v~~f~~~l 92 (121)
T 2lxf_A 30 SEDVTTLCYRVTGKVQGVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPKEQVDAFVKYL 92 (121)
T ss_dssp STTEEEEEEEEEECTTCCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred ccCEEEEEEEEEEeeCCcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHH
Confidence 35677888999855 44578999999999999999886 556655789999999999998776
No 8
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=75.07 E-value=4.8 Score=34.81 Aligned_cols=49 Identities=10% Similarity=0.073 Sum_probs=39.4
Q ss_pred CCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHHh
Q 006766 507 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 555 (632)
Q Consensus 507 LsnP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 555 (632)
..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 18 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~ 67 (99)
T 2vh7_A 18 VQGVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLE 67 (99)
T ss_dssp CSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHH
T ss_pred eCCcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 445567888899999999999875 5556457899999999999887775
No 9
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=72.98 E-value=6.4 Score=33.97 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=40.6
Q ss_pred EEEEc-CCCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHH
Q 006766 501 VYKIN-DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 554 (632)
Q Consensus 501 VyrV~-~LsnP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM 554 (632)
-+.|. ...-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 10 ~i~V~G~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l 65 (98)
T 1aps_A 10 DYEVFGRVQGVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEEKVNSMKSWL 65 (98)
T ss_dssp EEEEECTTSCCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHHHHHHHHHSS
T ss_pred EEEEEEEECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence 34444 3455667889999999999999875 455534789999999999886555
No 10
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=67.59 E-value=3.7 Score=34.78 Aligned_cols=46 Identities=24% Similarity=0.211 Sum_probs=36.4
Q ss_pred CccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHHh
Q 006766 510 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 555 (632)
Q Consensus 510 P~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 555 (632)
=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 15 VGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 61 (88)
T 1ulr_A 15 VGYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK 61 (88)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence 345777888899999999875 4455346889999999999887774
No 11
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=67.21 E-value=3.7 Score=34.92 Aligned_cols=46 Identities=17% Similarity=0.322 Sum_probs=36.8
Q ss_pred ccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHHhh
Q 006766 511 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 556 (632)
Q Consensus 511 ~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 556 (632)
--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.+
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~ 62 (91)
T 2fhm_A 16 GFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPENALQSFVEAVKN 62 (91)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHHh
Confidence 45777888899999999885 45564468899999999999887743
No 12
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=66.74 E-value=3.5 Score=35.19 Aligned_cols=49 Identities=20% Similarity=0.245 Sum_probs=38.5
Q ss_pred CCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHHh
Q 006766 507 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 555 (632)
Q Consensus 507 LsnP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 555 (632)
..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 14 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 63 (92)
T 2gv1_A 14 VQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLK 63 (92)
T ss_dssp CTTTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHHHHHHHHHHHH
T ss_pred eCCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHhh
Confidence 344456788889999999999875 4555346889999999999887773
No 13
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=65.48 E-value=3.7 Score=35.79 Aligned_cols=51 Identities=10% Similarity=0.025 Sum_probs=40.6
Q ss_pred CCCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHHhh
Q 006766 506 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 556 (632)
Q Consensus 506 ~LsnP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 556 (632)
...-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.+
T Consensus 20 ~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~~ 71 (102)
T 1urr_A 20 RVQGVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLEN 71 (102)
T ss_dssp ECSSSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHH
T ss_pred eECCcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHh
Confidence 3455567888999999999999875 55564578999999999999887753
No 14
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=63.10 E-value=3.6 Score=35.13 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=36.6
Q ss_pred CCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHH
Q 006766 508 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 554 (632)
Q Consensus 508 snP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM 554 (632)
.-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 15 QGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l 62 (91)
T 1w2i_A 15 QGVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWA 62 (91)
T ss_dssp SSSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHHHHHHHHHH
Confidence 33446778888999999999885 455545788999999999877655
No 15
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=62.87 E-value=3.9 Score=35.56 Aligned_cols=50 Identities=24% Similarity=0.179 Sum_probs=39.3
Q ss_pred CCCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHHh
Q 006766 506 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 555 (632)
Q Consensus 506 ~LsnP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 555 (632)
...-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 21 ~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~l~~f~~~l~ 71 (98)
T 3trg_A 21 KVQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLW 71 (98)
T ss_dssp ECSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTT
T ss_pred eECCCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEECHHHHHHHHHHHH
Confidence 3455567888999999999999985 4455457889999999998876653
No 16
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=62.55 E-value=4.4 Score=35.36 Aligned_cols=49 Identities=20% Similarity=0.178 Sum_probs=40.1
Q ss_pred CCCCCccccccccccccccceeEEE-ecCCceEEEEecchhHHHHHHHHH
Q 006766 506 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 554 (632)
Q Consensus 506 ~LsnP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM 554 (632)
...----|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus 23 ~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l 72 (101)
T 2bjd_A 23 LVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERI 72 (101)
T ss_dssp ECSSSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred eECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence 4566778899999999999999875 455644688999999999987776
No 17
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A
Probab=56.60 E-value=52 Score=30.62 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=41.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 006766 389 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 468 (632)
Q Consensus 389 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~ 468 (632)
....|-||..-+.+||..+...+...+ + +....-.-|+-|-+..--|+.+|++.+.+..+.+.....+
T Consensus 40 m~~~L~LTdeQkqqir~L~~~~r~~~~----------~--~~~~~r~~l~~Li~ad~fDeaa~ral~~~~~~~~~e~~v~ 107 (145)
T 3itf_A 40 MFDGISLTEHQRQQMRDLMQQARHEQP----------P--VNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVE 107 (145)
T ss_dssp TTTTCCCCHHHHHHHHHHHHHHHHHSC----------C--CCHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHhh----------h--ccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999987654443211 1 1111112233333333446555555444443333332222
Q ss_pred H----HHhcc-CCHHHHH
Q 006766 469 R----NIARK-LTPAERR 481 (632)
Q Consensus 469 ~----NeeRK-LT~EQRr 481 (632)
+ |.-.. ||||||.
T Consensus 108 r~k~~~qiy~vLTPEQk~ 125 (145)
T 3itf_A 108 MAKVRNQMYRLLTPEQQA 125 (145)
T ss_dssp HHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHhhCCHHHHH
Confidence 2 22233 9999974
No 18
>3zs9_C Golgi to ER traffic protein 2; hydrolase-transport protein complex, membrane protein, targe factor; HET: ADP; 2.10A {Saccharomyces cerevisiae}
Probab=55.42 E-value=8.4 Score=28.82 Aligned_cols=20 Identities=30% Similarity=0.478 Sum_probs=16.5
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 006766 394 KLTKKEQKKLRTQRRLAREK 413 (632)
Q Consensus 394 yLTKKEqKKLRRqrR~e~~K 413 (632)
-||..|+.+|||.||+++-+
T Consensus 3 els~~ekaRlrRERR~aKi~ 22 (38)
T 3zs9_C 3 ELTEAEKRRLLRERRQKKFS 22 (38)
T ss_dssp -CCHHHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 38899999999999987643
No 19
>1f32_A Major pepsin inhibitor PI-3; proteinase inhibitor, hydrolase inhibitor; 1.75A {Ascaris suum} SCOP: d.62.1.1 PDB: 1f34_B*
Probab=54.96 E-value=8.7 Score=36.09 Aligned_cols=36 Identities=33% Similarity=0.577 Sum_probs=20.6
Q ss_pred CCHHHHHHHHH-HHHHHHHHHHHHHHHc------------CCCCCCCcc
Q 006766 395 LTKKEQKKLRT-QRRLAREKDRQEMIRQ------------GLIEPPKPK 430 (632)
Q Consensus 395 LTKKEqKKLRR-qrR~e~~KEkQdKIRL------------GL~PPPpPK 430 (632)
||..|+..|-. +......+|+|+.+++ ||.||++|-
T Consensus 96 LT~~Eq~EL~~y~~k~~a~eer~e~~~~~~~~~k~~k~~~~~~pP~kPS 144 (149)
T 1f32_A 96 LTAKDHAEVQTFREKIAAFEEQQENQPPSSGMPHGAVPAGGLSPPPPPS 144 (149)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHC--------------------CCCCCCG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCCCcccccCCCCCCCC
Confidence 89999999876 5555566666666554 677777763
No 20
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=47.12 E-value=15 Score=26.33 Aligned_cols=16 Identities=44% Similarity=0.696 Sum_probs=14.3
Q ss_pred cHHHHHHHHHHHHHhc
Q 006766 145 NIEAVKRAQELAAKMG 160 (632)
Q Consensus 145 ~~~~~~r~~~~~~~~~ 160 (632)
=-+++.||+.+|++|+
T Consensus 10 FadA~~RaRQIaAKig 25 (31)
T 2kxh_B 10 FKDALQRARQIAAKIG 25 (31)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3589999999999988
No 21
>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}
Probab=45.84 E-value=59 Score=28.86 Aligned_cols=78 Identities=19% Similarity=0.349 Sum_probs=45.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 006766 389 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 468 (632)
Q Consensus 389 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~ 468 (632)
....|-||-.-+-+||..+...+..- +.| .+--...|..++.++.. | |+.||.+++++.+.+.+
T Consensus 12 ~~~~L~LTd~Qk~qir~L~~~~r~~~----------~~~-~~~~r~~m~~Li~ad~F-D----Eaaar~l~~~~~~~~~e 75 (108)
T 3o39_A 12 SFKDLNLTDAQKQQIREIMKGQRDQM----------KRP-PLEERRAMHDIIASDTF-D----KAKAEAQIAKMEEQRKA 75 (108)
T ss_dssp -CCCSCCCHHHHHHHHHHHHTTTTSC----------CCC-CHHHHHHHHHHHSSSSC-C----HHHHHHHHHHTHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHhc----------ccc-cHHHHHHHHHHhccCCC-C----HHHHHHHHHHHHHHHHH
Confidence 45789999888888887666554421 111 11112234444444433 4 67777777777766666
Q ss_pred HHHhc---------cCCHHHHHH
Q 006766 469 RNIAR---------KLTPAERRE 482 (632)
Q Consensus 469 ~NeeR---------KLT~EQRre 482 (632)
+=.+| =||||||..
T Consensus 76 ~~v~~~r~~~qmy~lLTPEQk~q 98 (108)
T 3o39_A 76 NMLAHMETQNKIYNILTPEQKKQ 98 (108)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHH
Confidence 55444 499999744
No 22
>3sjd_D Golgi to ER traffic protein 2; ATPase, receptor complex, TA-protein biogenesis, GET pathway hydrolase-transport protein complex; HET: ADP; 4.60A {Saccharomyces cerevisiae}
Probab=44.29 E-value=18 Score=27.99 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=16.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 006766 391 QPLKLTKKEQKKLRTQRRLAREKD 414 (632)
Q Consensus 391 ~plyLTKKEqKKLRRqrR~e~~KE 414 (632)
..--|+..|+.+|||.||+++-+.
T Consensus 10 ~~~~lsa~EkaRLrRERR~aKi~~ 33 (46)
T 3sjd_D 10 MGSELTEAEKRRLLRERRQKKFSN 33 (46)
T ss_dssp -----CHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHc
Confidence 445688999999999999987554
No 23
>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A
Probab=43.55 E-value=11 Score=32.17 Aligned_cols=38 Identities=18% Similarity=0.001 Sum_probs=30.0
Q ss_pred CCCCCccccccccccccccceeEEE-ecCCceEEEEecch
Q 006766 506 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGS 544 (632)
Q Consensus 506 ~LsnP~hrFKVd~NAqQl~LTG~cl-i~~~~nlVVVEGG~ 544 (632)
...-=--|+-+...|++|+|+|.|. ..++ =.|++||.+
T Consensus 16 ~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG-Vei~~eG~~ 54 (91)
T 1gxu_A 16 KVQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP 54 (91)
T ss_dssp ECSSSSHHHHHHHHHHHHTCCEEEEECSSS-EEEEESSCC
T ss_pred eeCCcCHHHHHHHHHHHcCCeEEEEECCCc-EEEEEEECH
Confidence 3455567888899999999999875 5667 567889988
No 24
>2kne_B CAM, ATPase, Ca++ transporting, plasma membrane 4; protein/peptide, calcium pump, calmodulin, acetylation, calcium, isopeptide bond, methylation; NMR {Homo sapiens}
Probab=34.16 E-value=20 Score=25.22 Aligned_cols=24 Identities=38% Similarity=0.614 Sum_probs=16.5
Q ss_pred HHHHhhhhhHHHHHHHHHHhCCcc
Q 006766 30 NQLLWHRGLRLILLWLLVILPFLL 53 (632)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~ 53 (632)
-|+||-|||-.|-.=+-++-++.|
T Consensus 4 gqiLW~RgL~riqtQ~rvi~af~s 27 (28)
T 2kne_B 4 GQILWFRGLNRIQTQIKVVKAFHS 27 (28)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cceeeeccHHHHHHHHHHHHhhhc
Confidence 489999999877665555444433
No 25
>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}
Probab=29.26 E-value=47 Score=30.34 Aligned_cols=81 Identities=20% Similarity=0.347 Sum_probs=42.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHH-
Q 006766 389 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHI- 467 (632)
Q Consensus 389 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He- 467 (632)
....|-||..-+.+||..+...+..-. .+--..+ .-|..++.++ --|+.+|++.+.+..+.+.....
T Consensus 28 m~~~L~LT~eQ~~qir~i~~~~r~~~~----------~~~~~~r-~~l~~Li~a~-~fDeaav~al~~~~~~~~~e~~~~ 95 (138)
T 3oeo_A 28 MFKDLNLTDAQKQQIREIMKGQRDQMK----------RPPLEER-RAMHDIITSD-TFDKVKAEAQIAKMEEQRKANMLA 95 (138)
T ss_dssp --CCSCCCTTHHHHHHHHHHHHSSSSC----------CCCTTHH-HHHHHHHTCS-SCCHHHHHHHHGGGSHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHH----------HHHHHHH-HHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457799999999999976544432111 1111111 2344444443 34777766666554433332222
Q ss_pred ---HHHHhcc-CCHHHHH
Q 006766 468 ---DRNIARK-LTPAERR 481 (632)
Q Consensus 468 ---~~NeeRK-LT~EQRr 481 (632)
-+|.-+. ||||||.
T Consensus 96 ~~~~~~~~~~vLTPEQr~ 113 (138)
T 3oeo_A 96 HMETQNKIYNILTPEQKK 113 (138)
T ss_dssp HHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHhCCHHHHH
Confidence 2355555 9999974
No 26
>2ksw_A Oryctin; kazal-type, protease inhibitor, hydrolase inhibitor; NMR {Oryctes rhinoceros}
Probab=22.20 E-value=71 Score=25.64 Aligned_cols=28 Identities=25% Similarity=0.442 Sum_probs=22.2
Q ss_pred cceeEEEecCCceEEEEecchhHHHHHHH
Q 006766 524 RLTGCAVICEGINVVVVEGGSKSIKRYGK 552 (632)
Q Consensus 524 ~LTG~cli~~~~nlVVVEGG~KsiKkYkk 552 (632)
.|.--|.+++.-+||||-||- +..+||-
T Consensus 15 dlvphcflnpekgivvvhggc-alskykc 42 (66)
T 2ksw_A 15 DLVPHCFLNPEKGIVVVHGGC-ALSKYKC 42 (66)
T ss_dssp CSCCEEEECTTSCEEEECSHH-HHHHHHH
T ss_pred cccchhhcccccCEEEEecce-eeeeccc
Confidence 455678899999999999985 6677764
No 27
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=20.07 E-value=48 Score=21.89 Aligned_cols=12 Identities=25% Similarity=0.086 Sum_probs=9.3
Q ss_pred HHHHcCCCCCCC.....
Q 006766 417 EMIRQGLIEPPK..... 428 (632)
Q Consensus 417 dKIRLGL~PPPp..... 428 (632)
-++.|||-|.||
T Consensus 10 ~r~~lGLkplp~..... 21 (21)
T 3plv_C 10 LRASLGLKLIPPxxxxx 26 (26)
T ss_dssp HHHHTTCCCCCC.....
T ss_pred HHHHcCCCCCCC.....
Confidence 456799988886
Done!