Query 006768
Match_columns 632
No_of_seqs 659 out of 3969
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 14:12:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006768.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006768hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 2E-158 5E-163 1277.0 44.2 612 1-624 4-618 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 3E-41 6.5E-46 307.6 9.4 164 451-621 1-164 (164)
3 KOG0873 C-4 sterol methyl oxid 100.0 3.9E-36 8.5E-41 299.2 14.4 235 27-273 12-260 (283)
4 PRK14982 acyl-ACP reductase; P 100.0 8.7E-32 1.9E-36 282.5 22.9 298 294-622 2-337 (340)
5 KOG0872 Sterol C5 desaturase [ 100.0 1.3E-28 2.9E-33 240.7 11.7 233 30-281 22-271 (312)
6 COG3000 ERG3 Sterol desaturase 100.0 1.5E-27 3.3E-32 246.0 18.2 155 123-287 95-251 (271)
7 COG5322 Predicted dehydrogenas 99.9 7.4E-23 1.6E-27 201.2 14.7 241 371-623 83-351 (351)
8 KOG0874 Sphingolipid hydroxyla 99.9 9.1E-24 2E-28 200.3 3.4 147 123-278 122-271 (287)
9 PF04116 FA_hydroxylase: Fatty 99.7 1.4E-17 3.1E-22 149.0 7.0 112 129-250 3-114 (114)
10 PRK12548 shikimate 5-dehydroge 99.5 1.5E-14 3.3E-19 151.0 10.2 167 386-563 74-266 (289)
11 COG0169 AroE Shikimate 5-dehyd 99.5 3.7E-14 8E-19 146.2 8.0 167 386-563 71-256 (283)
12 PRK14027 quinate/shikimate deh 99.5 2E-13 4.3E-18 141.8 10.3 167 386-563 74-259 (283)
13 PRK12549 shikimate 5-dehydroge 99.4 1.4E-13 3.1E-18 143.1 8.5 167 386-563 75-257 (284)
14 PRK00258 aroE shikimate 5-dehy 99.4 2.9E-13 6.2E-18 140.7 8.7 166 386-563 70-251 (278)
15 PRK12749 quinate/shikimate deh 99.4 6.1E-13 1.3E-17 138.5 9.4 167 386-563 72-263 (288)
16 TIGR01809 Shik-DH-AROM shikima 99.4 8.7E-13 1.9E-17 137.3 8.2 168 386-564 70-262 (282)
17 PRK12550 shikimate 5-dehydroge 99.3 1.3E-12 2.8E-17 134.9 7.7 159 386-563 71-246 (272)
18 cd01078 NAD_bind_H4MPT_DH NADP 99.3 2.2E-11 4.9E-16 119.7 16.2 170 430-617 1-194 (194)
19 TIGR00507 aroE shikimate 5-deh 99.3 2.3E-12 5E-17 133.4 9.0 166 386-563 65-244 (270)
20 COG4221 Short-chain alcohol de 99.3 1.2E-11 2.7E-16 122.7 10.3 67 446-512 4-71 (246)
21 PLN02520 bifunctional 3-dehydr 99.2 4.6E-11 1E-15 134.5 8.6 163 386-563 315-505 (529)
22 COG0300 DltE Short-chain dehyd 99.1 2.5E-11 5.3E-16 123.7 3.8 68 445-512 3-74 (265)
23 PRK09310 aroDE bifunctional 3- 99.1 5E-11 1.1E-15 132.7 6.2 156 386-562 280-445 (477)
24 KOG1205 Predicted dehydrogenas 99.1 6.7E-11 1.5E-15 121.4 5.1 68 445-512 9-81 (282)
25 PRK07424 bifunctional sterol d 99.1 3.7E-09 8E-14 115.2 18.6 66 447-512 177-242 (406)
26 PLN02434 fatty acid hydroxylas 99.0 7.9E-09 1.7E-13 103.3 14.5 135 123-273 83-230 (237)
27 KOG1207 Diacetyl reductase/L-x 98.9 3E-09 6.5E-14 99.7 6.3 159 445-608 4-179 (245)
28 COG3967 DltE Short-chain dehyd 98.8 2.5E-08 5.3E-13 96.3 11.1 71 446-517 3-73 (245)
29 KOG1201 Hydroxysteroid 17-beta 98.8 1.9E-09 4.2E-14 110.0 3.6 67 446-512 36-104 (300)
30 PRK08339 short chain dehydroge 98.8 4.8E-09 1E-13 108.0 5.2 68 445-512 5-76 (263)
31 KOG0725 Reductases with broad 98.8 8.5E-09 1.9E-13 106.7 7.1 68 445-512 5-78 (270)
32 KOG1208 Dehydrogenases with di 98.8 2.1E-08 4.7E-13 105.5 10.2 95 442-537 29-128 (314)
33 KOG1014 17 beta-hydroxysteroid 98.7 3.5E-08 7.5E-13 101.3 8.5 63 446-508 47-113 (312)
34 PRK08415 enoyl-(acyl carrier p 98.7 1.8E-08 3.9E-13 104.5 6.4 66 446-512 3-73 (274)
35 PRK06079 enoyl-(acyl carrier p 98.7 3E-08 6.6E-13 101.3 6.2 66 446-512 5-73 (252)
36 PRK06505 enoyl-(acyl carrier p 98.6 3E-08 6.5E-13 102.7 5.3 66 446-512 5-75 (271)
37 PRK08594 enoyl-(acyl carrier p 98.6 4.8E-08 1E-12 100.3 5.6 68 445-512 4-77 (257)
38 PRK05854 short chain dehydroge 98.6 1.5E-07 3.2E-12 99.6 9.3 67 446-512 12-83 (313)
39 KOG1209 1-Acyl dihydroxyaceton 98.6 1.5E-07 3.3E-12 91.2 8.2 154 447-606 6-179 (289)
40 PRK08265 short chain dehydroge 98.6 2E-07 4.4E-12 95.6 9.3 67 446-512 4-70 (261)
41 PRK06603 enoyl-(acyl carrier p 98.6 6.1E-08 1.3E-12 99.6 5.0 66 446-512 6-76 (260)
42 PRK07533 enoyl-(acyl carrier p 98.5 7.6E-08 1.7E-12 98.7 5.7 68 444-512 6-78 (258)
43 PRK08862 short chain dehydroge 98.5 2.7E-07 5.8E-12 93.1 9.1 67 446-512 3-72 (227)
44 PRK07370 enoyl-(acyl carrier p 98.5 1E-07 2.2E-12 97.8 6.2 66 446-512 4-77 (258)
45 TIGR03325 BphB_TodD cis-2,3-di 98.5 3.8E-07 8.3E-12 93.5 9.5 67 446-512 3-69 (262)
46 PRK05717 oxidoreductase; Valid 98.5 3.7E-07 8.1E-12 93.1 9.3 70 443-512 5-74 (255)
47 PRK06139 short chain dehydroge 98.5 3.7E-07 8E-12 97.4 9.4 68 445-512 4-74 (330)
48 PRK06484 short chain dehydroge 98.5 9.8E-08 2.1E-12 107.8 5.2 67 446-512 267-333 (520)
49 PRK05867 short chain dehydroge 98.5 3.1E-07 6.7E-12 93.6 8.4 68 445-512 6-76 (253)
50 PRK06196 oxidoreductase; Provi 98.5 4.5E-07 9.8E-12 95.8 9.8 71 441-512 19-89 (315)
51 PRK06200 2,3-dihydroxy-2,3-dih 98.5 4.4E-07 9.5E-12 93.0 9.3 67 446-512 4-70 (263)
52 KOG1200 Mitochondrial/plastidi 98.5 3.4E-07 7.4E-12 87.6 7.6 66 446-511 12-79 (256)
53 PRK05872 short chain dehydroge 98.5 5.5E-07 1.2E-11 94.4 9.8 68 445-512 6-75 (296)
54 PRK08159 enoyl-(acyl carrier p 98.5 1.8E-07 3.9E-12 96.9 5.9 66 446-512 8-78 (272)
55 PRK07825 short chain dehydroge 98.5 5.6E-07 1.2E-11 92.8 9.4 66 446-512 3-68 (273)
56 PRK07063 short chain dehydroge 98.4 4.7E-07 1E-11 92.6 8.4 67 446-512 5-76 (260)
57 PRK07062 short chain dehydroge 98.4 6.2E-07 1.3E-11 92.0 9.1 68 445-512 5-77 (265)
58 PRK07478 short chain dehydroge 98.4 7.1E-07 1.5E-11 90.9 9.2 67 446-512 4-73 (254)
59 PRK07067 sorbitol dehydrogenas 98.4 8E-07 1.7E-11 90.7 9.2 67 446-512 4-70 (257)
60 PRK05866 short chain dehydroge 98.4 7.7E-07 1.7E-11 93.2 9.3 68 445-512 37-107 (293)
61 PRK07523 gluconate 5-dehydroge 98.4 6.7E-07 1.5E-11 91.2 8.5 69 444-512 6-77 (255)
62 PRK05876 short chain dehydroge 98.4 7.2E-07 1.6E-11 92.5 8.7 67 446-512 4-73 (275)
63 PRK08589 short chain dehydroge 98.4 8.6E-07 1.9E-11 91.6 9.2 66 446-512 4-72 (272)
64 PRK12481 2-deoxy-D-gluconate 3 98.4 9.3E-07 2E-11 90.2 9.3 68 445-512 5-73 (251)
65 PLN02780 ketoreductase/ oxidor 98.4 8.2E-07 1.8E-11 94.3 9.1 60 446-505 51-115 (320)
66 PRK07109 short chain dehydroge 98.4 9.5E-07 2.1E-11 94.4 9.4 68 445-512 5-75 (334)
67 PRK06997 enoyl-(acyl carrier p 98.4 3.1E-07 6.8E-12 94.4 5.5 66 446-512 4-74 (260)
68 PRK07889 enoyl-(acyl carrier p 98.4 8.5E-07 1.9E-11 90.9 8.6 67 446-512 5-75 (256)
69 PRK08303 short chain dehydroge 98.4 8.5E-07 1.8E-11 93.6 8.4 67 446-512 6-85 (305)
70 PRK06101 short chain dehydroge 98.4 1.2E-06 2.6E-11 88.7 9.2 63 449-512 2-64 (240)
71 PF00106 adh_short: short chai 98.4 8.8E-07 1.9E-11 84.0 7.7 64 449-512 1-70 (167)
72 PRK07453 protochlorophyllide o 98.4 1.2E-06 2.7E-11 92.8 9.6 67 446-512 4-73 (322)
73 PRK08085 gluconate 5-dehydroge 98.4 1.1E-06 2.5E-11 89.4 8.8 68 445-512 6-76 (254)
74 cd01065 NAD_bind_Shikimate_DH 98.4 8.6E-07 1.9E-11 83.5 7.4 131 430-563 1-146 (155)
75 KOG1478 3-keto sterol reductas 98.4 8.3E-07 1.8E-11 88.2 7.3 90 448-562 3-104 (341)
76 PRK07024 short chain dehydroge 98.4 1.2E-06 2.6E-11 89.5 8.9 65 448-512 2-68 (257)
77 PRK08416 7-alpha-hydroxysteroi 98.4 1.2E-06 2.6E-11 89.8 8.9 67 446-512 6-77 (260)
78 PRK06197 short chain dehydroge 98.4 1.2E-06 2.5E-11 92.3 8.9 67 446-512 14-85 (306)
79 PLN02253 xanthoxin dehydrogena 98.4 1.5E-06 3.2E-11 90.0 9.5 67 446-512 16-84 (280)
80 PRK06720 hypothetical protein; 98.3 1.7E-06 3.8E-11 83.2 9.2 67 446-512 14-83 (169)
81 PF01488 Shikimate_DH: Shikima 98.3 1.3E-06 2.8E-11 80.9 7.7 95 445-544 9-114 (135)
82 PRK09186 flagellin modificatio 98.3 1.5E-06 3.3E-11 88.3 9.0 66 447-512 3-73 (256)
83 PRK07890 short chain dehydroge 98.3 1.6E-06 3.4E-11 88.3 9.0 67 446-512 3-72 (258)
84 TIGR01289 LPOR light-dependent 98.3 1.5E-06 3.2E-11 92.1 9.1 66 447-512 2-71 (314)
85 PRK06138 short chain dehydroge 98.3 1.6E-06 3.5E-11 87.8 9.0 67 446-512 3-71 (252)
86 PRK07097 gluconate 5-dehydroge 98.3 1.7E-06 3.7E-11 88.8 9.2 70 443-512 5-77 (265)
87 PRK06500 short chain dehydroge 98.3 1.9E-06 4E-11 87.2 9.2 67 446-512 4-70 (249)
88 PRK06194 hypothetical protein; 98.3 1.6E-06 3.6E-11 89.9 8.8 67 446-512 4-73 (287)
89 PRK06125 short chain dehydroge 98.3 2.1E-06 4.5E-11 87.9 9.4 68 445-512 4-75 (259)
90 PRK06124 gluconate 5-dehydroge 98.3 2.1E-06 4.5E-11 87.5 9.3 70 443-512 6-78 (256)
91 PRK09072 short chain dehydroge 98.3 2.1E-06 4.6E-11 88.0 9.4 67 446-512 3-71 (263)
92 PRK07791 short chain dehydroge 98.3 1.5E-06 3.3E-11 90.6 8.4 67 446-512 4-82 (286)
93 PRK05599 hypothetical protein; 98.3 1.6E-06 3.4E-11 88.3 8.2 63 449-512 1-67 (246)
94 PRK07035 short chain dehydroge 98.3 2.1E-06 4.5E-11 87.3 9.1 68 445-512 5-75 (252)
95 PRK06484 short chain dehydroge 98.3 1.9E-06 4.1E-11 97.4 9.5 67 446-512 3-69 (520)
96 PRK08340 glucose-1-dehydrogena 98.3 1.7E-06 3.7E-11 88.5 8.3 63 450-512 2-66 (259)
97 PRK06180 short chain dehydroge 98.3 2.2E-06 4.7E-11 88.8 9.0 66 447-512 3-68 (277)
98 PRK07904 short chain dehydroge 98.3 1.5E-06 3.1E-11 89.1 7.6 66 447-512 7-78 (253)
99 TIGR01832 kduD 2-deoxy-D-gluco 98.3 2.5E-06 5.3E-11 86.5 9.2 68 445-512 2-70 (248)
100 PRK07677 short chain dehydroge 98.3 1.9E-06 4.2E-11 87.7 8.4 65 448-512 1-68 (252)
101 PRK08267 short chain dehydroge 98.3 2.6E-06 5.6E-11 87.1 9.2 64 449-512 2-66 (260)
102 PRK07814 short chain dehydroge 98.3 2.6E-06 5.7E-11 87.4 9.2 68 445-512 7-77 (263)
103 PRK07231 fabG 3-ketoacyl-(acyl 98.3 2.4E-06 5.1E-11 86.5 8.7 67 446-512 3-71 (251)
104 PRK06949 short chain dehydroge 98.3 3E-06 6.6E-11 86.2 9.4 68 445-512 6-76 (258)
105 PRK09242 tropinone reductase; 98.3 2.6E-06 5.7E-11 86.9 8.8 68 445-512 6-78 (257)
106 PRK08277 D-mannonate oxidoredu 98.3 2.5E-06 5.4E-11 88.2 8.6 67 446-512 8-77 (278)
107 PRK08643 acetoin reductase; Va 98.3 2.2E-06 4.8E-11 87.3 8.1 65 448-512 2-69 (256)
108 PRK06935 2-deoxy-D-gluconate 3 98.3 3.4E-06 7.5E-11 86.2 9.5 67 445-512 12-81 (258)
109 PRK06172 short chain dehydroge 98.3 3.2E-06 7E-11 85.9 9.2 67 446-512 5-74 (253)
110 PRK10538 malonic semialdehyde 98.3 3.1E-06 6.8E-11 86.0 9.0 64 449-512 1-64 (248)
111 PRK06057 short chain dehydroge 98.3 3.6E-06 7.8E-11 85.9 9.5 65 446-512 5-69 (255)
112 PRK06924 short chain dehydroge 98.3 2.5E-06 5.3E-11 86.6 8.2 64 449-512 2-66 (251)
113 PRK08251 short chain dehydroge 98.2 3E-06 6.6E-11 85.8 8.7 65 448-512 2-71 (248)
114 PRK08213 gluconate 5-dehydroge 98.2 3E-06 6.4E-11 86.6 8.6 68 445-512 9-79 (259)
115 PRK06482 short chain dehydroge 98.2 3.3E-06 7.2E-11 87.2 9.1 65 448-512 2-66 (276)
116 PRK05993 short chain dehydroge 98.2 2.9E-06 6.2E-11 87.9 8.5 63 447-512 3-65 (277)
117 PRK06113 7-alpha-hydroxysteroi 98.2 3.7E-06 8.1E-11 85.7 9.2 68 445-512 8-78 (255)
118 PRK08642 fabG 3-ketoacyl-(acyl 98.2 4.1E-06 8.8E-11 85.0 9.2 67 446-512 3-70 (253)
119 PRK08628 short chain dehydroge 98.2 3.4E-06 7.3E-11 86.1 8.6 68 444-512 3-73 (258)
120 PRK12936 3-ketoacyl-(acyl-carr 98.2 4.3E-06 9.4E-11 84.2 9.3 67 446-512 4-70 (245)
121 PRK07984 enoyl-(acyl carrier p 98.2 2.7E-06 5.9E-11 87.7 7.9 66 446-512 4-74 (262)
122 PRK08263 short chain dehydroge 98.2 4E-06 8.7E-11 86.6 9.2 66 447-512 2-67 (275)
123 PRK07102 short chain dehydroge 98.2 3.3E-06 7.3E-11 85.4 8.4 65 448-512 1-69 (243)
124 PRK07576 short chain dehydroge 98.2 3.3E-06 7.2E-11 86.8 8.5 68 445-512 6-76 (264)
125 PRK07774 short chain dehydroge 98.2 4.4E-06 9.6E-11 84.6 9.2 67 446-512 4-73 (250)
126 PRK12429 3-hydroxybutyrate deh 98.2 4.3E-06 9.4E-11 84.9 9.1 66 447-512 3-71 (258)
127 TIGR01500 sepiapter_red sepiap 98.2 3E-06 6.4E-11 86.7 7.8 63 450-512 2-73 (256)
128 PRK06114 short chain dehydroge 98.2 4.2E-06 9.1E-11 85.4 8.9 68 445-512 5-76 (254)
129 PRK12823 benD 1,6-dihydroxycyc 98.2 4.4E-06 9.5E-11 85.3 9.0 66 446-512 6-74 (260)
130 KOG1610 Corticosteroid 11-beta 98.2 7.8E-07 1.7E-11 91.6 3.3 69 445-513 26-95 (322)
131 PRK06182 short chain dehydroge 98.2 4.8E-06 1.1E-10 85.9 8.9 63 447-512 2-64 (273)
132 PRK13394 3-hydroxybutyrate deh 98.2 4.4E-06 9.4E-11 85.2 8.2 67 446-512 5-74 (262)
133 PRK05786 fabG 3-ketoacyl-(acyl 98.2 5.3E-06 1.1E-10 83.4 8.6 67 446-512 3-71 (238)
134 PRK06841 short chain dehydroge 98.2 6.7E-06 1.5E-10 83.6 9.5 67 445-512 12-79 (255)
135 PRK06483 dihydromonapterin red 98.2 5.3E-06 1.1E-10 83.5 8.4 63 448-512 2-64 (236)
136 PRK05884 short chain dehydroge 98.2 5.4E-06 1.2E-10 83.2 8.4 61 450-512 2-62 (223)
137 PRK12939 short chain dehydroge 98.2 6.6E-06 1.4E-10 83.2 9.1 67 446-512 5-74 (250)
138 PRK07454 short chain dehydroge 98.2 5.3E-06 1.1E-10 83.7 8.3 66 447-512 5-73 (241)
139 PRK08690 enoyl-(acyl carrier p 98.2 5.3E-06 1.1E-10 85.3 8.4 66 446-512 4-74 (261)
140 PRK12384 sorbitol-6-phosphate 98.2 5.1E-06 1.1E-10 84.8 8.2 65 448-512 2-71 (259)
141 PRK07792 fabG 3-ketoacyl-(acyl 98.2 5.6E-06 1.2E-10 87.2 8.6 69 444-512 8-80 (306)
142 PRK08063 enoyl-(acyl carrier p 98.1 6.2E-06 1.3E-10 83.5 8.6 67 446-512 2-72 (250)
143 PRK05875 short chain dehydroge 98.1 6.4E-06 1.4E-10 84.9 8.8 67 446-512 5-76 (276)
144 PRK07831 short chain dehydroge 98.1 5.1E-06 1.1E-10 85.1 8.0 67 446-512 15-87 (262)
145 PRK07326 short chain dehydroge 98.1 7.8E-06 1.7E-10 82.1 9.0 67 446-512 4-72 (237)
146 PRK08217 fabG 3-ketoacyl-(acyl 98.1 7.2E-06 1.6E-10 82.9 8.7 67 446-512 3-72 (253)
147 PRK12828 short chain dehydroge 98.1 8.3E-06 1.8E-10 81.7 9.0 68 445-512 4-72 (239)
148 PRK07856 short chain dehydroge 98.1 6.5E-06 1.4E-10 83.8 8.3 63 445-512 3-65 (252)
149 PRK07074 short chain dehydroge 98.1 8.8E-06 1.9E-10 82.9 9.2 65 448-512 2-67 (257)
150 PRK12747 short chain dehydroge 98.1 8.4E-06 1.8E-10 82.9 8.8 66 447-512 3-72 (252)
151 PRK08936 glucose-1-dehydrogena 98.1 1E-05 2.2E-10 82.9 9.1 67 446-512 5-75 (261)
152 KOG1199 Short-chain alcohol de 98.1 5E-06 1.1E-10 78.2 6.1 67 446-512 7-73 (260)
153 TIGR03206 benzo_BadH 2-hydroxy 98.1 1E-05 2.2E-10 81.9 8.9 66 447-512 2-70 (250)
154 PRK12746 short chain dehydroge 98.1 9.8E-06 2.1E-10 82.4 8.9 67 446-512 4-74 (254)
155 PRK12742 oxidoreductase; Provi 98.1 1.1E-05 2.4E-10 81.0 9.0 65 446-512 4-69 (237)
156 PRK08993 2-deoxy-D-gluconate 3 98.1 8.7E-06 1.9E-10 83.1 8.3 69 443-512 5-75 (253)
157 PRK07985 oxidoreductase; Provi 98.1 1.1E-05 2.3E-10 84.7 9.1 67 446-512 47-118 (294)
158 PLN02730 enoyl-[acyl-carrier-p 98.1 5.5E-06 1.2E-10 87.3 6.9 47 445-492 6-54 (303)
159 PRK06914 short chain dehydroge 98.1 9.2E-06 2E-10 84.0 8.4 66 447-512 2-72 (280)
160 PRK07832 short chain dehydroge 98.1 9.9E-06 2.1E-10 83.6 8.6 64 449-512 1-68 (272)
161 PRK07060 short chain dehydroge 98.1 1.4E-05 3.1E-10 80.6 9.5 66 445-512 6-71 (245)
162 PRK07666 fabG 3-ketoacyl-(acyl 98.1 1.2E-05 2.6E-10 81.0 8.8 67 446-512 5-74 (239)
163 PRK12743 oxidoreductase; Provi 98.1 1.2E-05 2.6E-10 82.1 8.8 65 448-512 2-70 (256)
164 PRK09291 short chain dehydroge 98.1 1.2E-05 2.6E-10 81.7 8.7 65 448-512 2-69 (257)
165 PRK12826 3-ketoacyl-(acyl-carr 98.1 1E-05 2.2E-10 81.7 8.1 67 446-512 4-73 (251)
166 PRK05650 short chain dehydroge 98.1 1.2E-05 2.5E-10 82.9 8.6 64 449-512 1-67 (270)
167 PRK12829 short chain dehydroge 98.1 1.3E-05 2.9E-10 81.7 8.9 67 446-512 9-76 (264)
168 PRK06398 aldose dehydrogenase; 98.1 6.8E-06 1.5E-10 84.2 6.7 59 446-512 4-62 (258)
169 PRK06463 fabG 3-ketoacyl-(acyl 98.1 1.5E-05 3.3E-10 81.3 9.2 64 446-512 5-69 (255)
170 PRK06940 short chain dehydroge 98.0 1.3E-05 2.9E-10 83.0 8.7 63 448-512 2-67 (275)
171 PRK05693 short chain dehydroge 98.0 1.4E-05 2.9E-10 82.6 8.7 61 449-512 2-62 (274)
172 PRK07806 short chain dehydroge 98.0 1.4E-05 3.1E-10 80.9 8.7 67 446-512 4-74 (248)
173 TIGR02415 23BDH acetoin reduct 98.0 1.3E-05 2.9E-10 81.3 8.5 64 449-512 1-67 (254)
174 PRK05653 fabG 3-ketoacyl-(acyl 98.0 1.5E-05 3.2E-10 80.1 8.7 67 446-512 3-72 (246)
175 TIGR01963 PHB_DH 3-hydroxybuty 98.0 1.4E-05 3E-10 81.1 8.5 65 448-512 1-68 (255)
176 PRK08278 short chain dehydroge 98.0 1.6E-05 3.6E-10 82.1 9.2 68 445-512 3-80 (273)
177 PRK08264 short chain dehydroge 98.0 1.5E-05 3.3E-10 80.2 8.7 63 446-512 4-67 (238)
178 PRK07201 short chain dehydroge 98.0 1.3E-05 2.8E-10 93.3 9.4 67 446-512 369-438 (657)
179 COG1028 FabG Dehydrogenases wi 98.0 1.4E-05 3.1E-10 81.0 8.5 67 446-512 3-76 (251)
180 PRK05565 fabG 3-ketoacyl-(acyl 98.0 1.3E-05 2.8E-10 80.7 8.1 67 446-512 3-73 (247)
181 PRK07775 short chain dehydroge 98.0 1.5E-05 3.4E-10 82.3 8.7 67 446-512 8-77 (274)
182 PRK06179 short chain dehydroge 98.0 1.1E-05 2.3E-10 83.1 7.4 61 447-512 3-63 (270)
183 PRK09134 short chain dehydroge 98.0 1.9E-05 4.1E-10 80.6 9.1 67 446-512 7-77 (258)
184 PLN03209 translocon at the inn 98.0 1.4E-05 3.1E-10 89.8 8.8 67 446-512 78-156 (576)
185 PRK08226 short chain dehydroge 98.0 1.7E-05 3.7E-10 81.1 8.7 66 446-512 4-72 (263)
186 PRK05855 short chain dehydroge 98.0 1.4E-05 3.1E-10 91.0 9.0 67 446-512 313-382 (582)
187 PRK06523 short chain dehydroge 98.0 1.3E-05 2.9E-10 81.7 7.9 62 445-512 6-67 (260)
188 PRK06128 oxidoreductase; Provi 98.0 1.6E-05 3.5E-10 83.4 8.7 67 446-512 53-124 (300)
189 PLN00015 protochlorophyllide r 98.0 1.3E-05 2.8E-10 84.5 7.8 61 452-512 1-65 (308)
190 PRK08703 short chain dehydroge 98.0 2.2E-05 4.8E-10 79.2 9.0 60 446-505 4-67 (239)
191 PRK06181 short chain dehydroge 98.0 2.1E-05 4.5E-10 80.4 8.8 65 448-512 1-68 (263)
192 PRK08177 short chain dehydroge 98.0 1.4E-05 3E-10 80.0 7.2 62 449-512 2-63 (225)
193 PRK07041 short chain dehydroge 98.0 1.6E-05 3.4E-10 79.6 7.6 61 452-512 1-63 (230)
194 PRK08017 oxidoreductase; Provi 98.0 2.2E-05 4.7E-10 79.8 8.6 61 449-512 3-63 (256)
195 PRK12938 acetyacetyl-CoA reduc 98.0 2.2E-05 4.8E-10 79.4 8.5 66 447-512 2-71 (246)
196 PRK06198 short chain dehydroge 98.0 2.3E-05 4.9E-10 80.0 8.7 67 446-512 4-74 (260)
197 PRK12367 short chain dehydroge 98.0 2E-05 4.4E-10 80.4 8.1 63 446-511 12-75 (245)
198 PRK14192 bifunctional 5,10-met 98.0 1.9E-05 4.1E-10 82.2 7.9 119 397-542 115-235 (283)
199 TIGR02685 pter_reduc_Leis pter 97.9 2E-05 4.4E-10 81.0 7.9 61 449-509 2-67 (267)
200 PRK06701 short chain dehydroge 97.9 2.6E-05 5.7E-10 81.5 8.8 68 445-512 43-114 (290)
201 PRK12744 short chain dehydroge 97.9 2.9E-05 6.3E-10 79.3 8.8 67 446-512 6-79 (257)
202 PRK09135 pteridine reductase; 97.9 2.9E-05 6.3E-10 78.3 8.7 67 446-512 4-75 (249)
203 TIGR02632 RhaD_aldol-ADH rhamn 97.9 2.1E-05 4.6E-10 91.8 8.6 67 446-512 412-483 (676)
204 PRK06947 glucose-1-dehydrogena 97.9 3.2E-05 6.9E-10 78.3 8.6 65 448-512 2-70 (248)
205 PRK12937 short chain dehydroge 97.9 4E-05 8.6E-10 77.3 9.2 67 446-512 3-73 (245)
206 PRK06123 short chain dehydroge 97.9 3.7E-05 8.1E-10 77.7 8.9 65 448-512 2-70 (248)
207 PRK08324 short chain dehydroge 97.9 3E-05 6.6E-10 90.7 9.3 67 446-512 420-488 (681)
208 PRK12859 3-ketoacyl-(acyl-carr 97.9 4.1E-05 8.9E-10 78.3 8.9 67 446-512 4-86 (256)
209 PRK06953 short chain dehydroge 97.9 3.5E-05 7.6E-10 76.9 8.2 61 449-512 2-62 (222)
210 PRK06171 sorbitol-6-phosphate 97.9 2.2E-05 4.7E-10 80.5 6.7 62 445-512 6-67 (266)
211 PRK08945 putative oxoacyl-(acy 97.9 4.2E-05 9.1E-10 77.5 8.7 67 446-512 10-82 (247)
212 PRK12745 3-ketoacyl-(acyl-carr 97.9 4.3E-05 9.3E-10 77.7 8.8 65 448-512 2-70 (256)
213 PRK09730 putative NAD(P)-bindi 97.9 3.7E-05 8E-10 77.5 8.2 64 449-512 2-69 (247)
214 PRK07023 short chain dehydroge 97.9 3E-05 6.5E-10 78.4 7.4 62 449-512 2-63 (243)
215 TIGR01829 AcAcCoA_reduct aceto 97.9 3.9E-05 8.5E-10 77.1 8.2 64 449-512 1-68 (242)
216 PRK12748 3-ketoacyl-(acyl-carr 97.9 4.2E-05 9.1E-10 78.0 8.5 68 445-512 2-85 (256)
217 PRK12935 acetoacetyl-CoA reduc 97.9 4.1E-05 8.9E-10 77.5 8.1 67 446-512 4-74 (247)
218 KOG1210 Predicted 3-ketosphing 97.8 4.6E-05 1E-09 78.6 7.9 66 447-512 32-102 (331)
219 PRK07069 short chain dehydroge 97.8 4.4E-05 9.6E-10 77.2 7.8 62 451-512 2-69 (251)
220 PRK12827 short chain dehydroge 97.8 5.6E-05 1.2E-09 76.2 8.5 67 446-512 4-77 (249)
221 PRK05557 fabG 3-ketoacyl-(acyl 97.8 7.4E-05 1.6E-09 75.1 9.1 67 446-512 3-73 (248)
222 KOG0539 Sphingolipid fatty aci 97.8 5.7E-05 1.2E-09 72.8 7.4 133 124-274 84-234 (240)
223 TIGR01831 fabG_rel 3-oxoacyl-( 97.8 5.3E-05 1.1E-09 76.2 7.7 62 451-512 1-66 (239)
224 PLN02583 cinnamoyl-CoA reducta 97.8 8.3E-05 1.8E-09 78.0 9.3 68 445-512 3-75 (297)
225 PRK08219 short chain dehydroge 97.8 8.1E-05 1.8E-09 74.0 8.6 63 448-512 3-65 (227)
226 PRK08220 2,3-dihydroxybenzoate 97.8 7.6E-05 1.7E-09 75.6 8.4 62 445-512 5-66 (252)
227 PRK08261 fabG 3-ketoacyl-(acyl 97.8 9.8E-05 2.1E-09 82.1 9.7 66 445-512 207-274 (450)
228 TIGR03589 PseB UDP-N-acetylglu 97.7 0.0001 2.2E-09 78.4 8.9 66 447-512 3-71 (324)
229 PRK12824 acetoacetyl-CoA reduc 97.7 0.00012 2.5E-09 73.7 8.4 64 449-512 3-70 (245)
230 PRK13656 trans-2-enoyl-CoA red 97.7 0.00014 3E-09 78.2 9.1 66 446-512 39-121 (398)
231 PRK08309 short chain dehydroge 97.6 0.00019 4.1E-09 69.7 8.6 62 450-512 2-65 (177)
232 PRK12825 fabG 3-ketoacyl-(acyl 97.6 0.00016 3.5E-09 72.5 8.5 66 447-512 5-74 (249)
233 PLN02989 cinnamyl-alcohol dehy 97.6 0.0001 2.3E-09 77.9 7.3 66 447-512 4-74 (325)
234 PRK13940 glutamyl-tRNA reducta 97.6 0.00016 3.5E-09 79.3 8.7 155 378-545 113-279 (414)
235 KOG4169 15-hydroxyprostaglandi 97.6 0.00012 2.6E-09 72.3 6.7 68 445-512 2-73 (261)
236 PLN02896 cinnamyl-alcohol dehy 97.6 0.00015 3.1E-09 78.0 8.1 70 443-512 5-76 (353)
237 PRK06077 fabG 3-ketoacyl-(acyl 97.6 0.00022 4.9E-09 72.1 9.1 67 446-512 4-74 (252)
238 PRK07577 short chain dehydroge 97.6 0.00015 3.2E-09 72.6 7.3 58 447-512 2-59 (234)
239 COG0373 HemA Glutamyl-tRNA red 97.6 0.00034 7.3E-09 75.9 10.2 102 440-546 169-281 (414)
240 TIGR02622 CDP_4_6_dhtase CDP-g 97.5 0.00018 3.9E-09 77.1 7.6 66 447-512 3-70 (349)
241 TIGR02853 spore_dpaA dipicolin 97.5 0.00025 5.4E-09 74.2 8.3 95 443-543 146-245 (287)
242 PRK08291 ectoine utilization p 97.5 0.0002 4.3E-09 76.5 7.7 124 402-539 98-227 (330)
243 PF13460 NAD_binding_10: NADH( 97.5 0.00024 5.2E-09 68.5 7.3 57 451-512 1-57 (183)
244 TIGR02992 ectoine_eutC ectoine 97.5 0.00022 4.7E-09 76.0 7.6 123 403-539 96-224 (326)
245 PLN02686 cinnamoyl-CoA reducta 97.5 0.00036 7.8E-09 75.6 9.1 67 445-511 50-124 (367)
246 PF13561 adh_short_C2: Enoyl-( 97.5 0.00022 4.7E-09 72.2 6.9 56 455-512 1-62 (241)
247 PLN00141 Tic62-NAD(P)-related 97.5 0.00034 7.5E-09 71.3 8.3 59 446-505 15-73 (251)
248 TIGR01472 gmd GDP-mannose 4,6- 97.5 0.00026 5.7E-09 75.6 7.7 63 449-511 1-72 (343)
249 TIGR01830 3oxo_ACP_reduc 3-oxo 97.5 0.0003 6.4E-09 70.4 7.6 62 451-512 1-66 (239)
250 PF08659 KR: KR domain; Inter 97.4 0.00054 1.2E-08 66.6 8.8 63 450-512 2-71 (181)
251 PLN02986 cinnamyl-alcohol dehy 97.4 0.00032 7E-09 74.1 7.5 66 447-512 4-74 (322)
252 smart00822 PKS_KR This enzymat 97.4 0.00029 6.3E-09 66.3 5.9 64 449-512 1-71 (180)
253 PLN02601 beta-carotene hydroxy 97.4 0.00088 1.9E-08 67.2 9.3 131 113-261 126-272 (303)
254 PRK06550 fabG 3-ketoacyl-(acyl 97.4 0.00022 4.7E-09 71.5 5.2 55 446-506 3-57 (235)
255 PLN00203 glutamyl-tRNA reducta 97.3 0.00073 1.6E-08 76.1 9.1 158 379-545 197-375 (519)
256 PLN00198 anthocyanidin reducta 97.3 0.00054 1.2E-08 73.0 7.8 67 445-511 6-76 (338)
257 cd05311 NAD_bind_2_malic_enz N 97.3 0.00081 1.8E-08 67.9 8.3 120 434-560 11-155 (226)
258 COG1748 LYS9 Saccharopine dehy 97.3 0.00079 1.7E-08 72.7 8.5 90 449-539 2-99 (389)
259 PLN02653 GDP-mannose 4,6-dehyd 97.3 0.0005 1.1E-08 73.4 7.0 66 446-511 4-77 (340)
260 PLN02572 UDP-sulfoquinovose sy 97.3 0.00083 1.8E-08 74.7 9.0 66 446-511 45-130 (442)
261 PLN02650 dihydroflavonol-4-red 97.2 0.00075 1.6E-08 72.4 8.0 66 446-511 3-73 (351)
262 PLN02657 3,8-divinyl protochlo 97.2 0.001 2.2E-08 72.7 8.9 69 443-512 55-129 (390)
263 COG1086 Predicted nucleoside-d 97.2 0.00079 1.7E-08 74.8 7.6 116 386-512 194-320 (588)
264 PRK07578 short chain dehydroge 97.2 0.00065 1.4E-08 66.5 6.1 48 450-512 2-49 (199)
265 PLN02662 cinnamyl-alcohol dehy 97.2 0.00063 1.4E-08 71.7 6.4 65 447-511 3-72 (322)
266 PRK00045 hemA glutamyl-tRNA re 97.2 0.00071 1.5E-08 74.7 7.0 96 445-545 179-286 (423)
267 PLN02240 UDP-glucose 4-epimera 97.2 0.0013 2.9E-08 70.2 8.8 67 446-512 3-76 (352)
268 PLN02214 cinnamoyl-CoA reducta 97.2 0.0011 2.4E-08 71.0 8.1 66 446-511 8-77 (342)
269 PRK06300 enoyl-(acyl carrier p 97.1 0.00062 1.3E-08 71.7 6.0 38 444-481 4-43 (299)
270 PRK09009 C factor cell-cell si 97.1 0.00098 2.1E-08 66.9 6.6 59 449-512 1-61 (235)
271 cd05213 NAD_bind_Glutamyl_tRNA 97.0 0.0016 3.4E-08 69.0 7.5 155 379-545 111-279 (311)
272 TIGR02813 omega_3_PfaA polyket 97.0 0.0014 3.1E-08 85.7 8.2 35 447-481 1996-2031(2582)
273 CHL00194 ycf39 Ycf39; Provisio 97.0 0.002 4.3E-08 68.2 8.0 60 450-512 2-61 (317)
274 PLN02427 UDP-apiose/xylose syn 96.9 0.0018 3.9E-08 70.4 7.3 70 442-511 8-82 (386)
275 PF02719 Polysacc_synt_2: Poly 96.9 0.0017 3.6E-08 67.6 6.4 62 451-512 1-72 (293)
276 KOG1502 Flavonol reductase/cin 96.8 0.0026 5.6E-08 66.9 7.3 66 447-512 5-75 (327)
277 TIGR03466 HpnA hopanoid-associ 96.8 0.0014 3E-08 69.0 5.3 61 449-512 1-61 (328)
278 KOG1611 Predicted short chain- 96.8 0.0045 9.7E-08 61.4 8.2 65 448-512 3-72 (249)
279 COG0623 FabI Enoyl-[acyl-carri 96.8 0.0057 1.2E-07 60.8 8.5 67 445-512 3-74 (259)
280 COG2085 Predicted dinucleotide 96.8 0.0032 7E-08 62.0 6.7 90 449-543 2-97 (211)
281 PF00670 AdoHcyase_NAD: S-aden 96.7 0.003 6.6E-08 59.9 6.1 103 432-543 6-115 (162)
282 PRK08306 dipicolinate synthase 96.6 0.0065 1.4E-07 63.9 8.5 94 444-543 148-246 (296)
283 COG0702 Predicted nucleoside-d 96.6 0.0051 1.1E-07 62.9 7.3 59 450-512 2-60 (275)
284 TIGR03649 ergot_EASG ergot alk 96.6 0.0026 5.5E-08 66.1 5.1 57 450-512 1-57 (285)
285 PRK10675 UDP-galactose-4-epime 96.6 0.0049 1.1E-07 65.4 7.4 63 450-512 2-68 (338)
286 PRK07340 ornithine cyclodeamin 96.5 0.024 5.1E-07 59.9 11.8 116 425-543 94-223 (304)
287 PRK10217 dTDP-glucose 4,6-dehy 96.5 0.004 8.8E-08 66.7 5.9 64 449-512 2-69 (355)
288 TIGR01179 galE UDP-glucose-4-e 96.5 0.0051 1.1E-07 64.4 6.4 63 450-512 1-65 (328)
289 cd05212 NAD_bind_m-THF_DH_Cycl 96.4 0.0081 1.8E-07 56.0 6.7 79 442-541 22-102 (140)
290 TIGR01181 dTDP_gluc_dehyt dTDP 96.3 0.007 1.5E-07 63.1 6.7 63 450-512 1-68 (317)
291 PRK08618 ornithine cyclodeamin 96.3 0.024 5.3E-07 60.4 10.7 113 425-539 96-221 (325)
292 PRK05476 S-adenosyl-L-homocyst 96.3 0.035 7.5E-07 61.1 12.0 58 431-489 194-252 (425)
293 TIGR01035 hemA glutamyl-tRNA r 96.3 0.0091 2E-07 65.9 7.4 154 379-544 113-282 (417)
294 PRK05579 bifunctional phosphop 96.3 0.0093 2E-07 65.2 7.3 60 445-512 185-260 (399)
295 PF03446 NAD_binding_2: NAD bi 96.3 0.015 3.2E-07 55.5 7.8 103 449-559 2-122 (163)
296 PRK15181 Vi polysaccharide bio 96.2 0.011 2.3E-07 63.6 7.2 67 444-510 11-85 (348)
297 PF03435 Saccharop_dh: Sacchar 96.2 0.013 2.8E-07 63.9 7.8 61 451-512 1-64 (386)
298 cd01080 NAD_bind_m-THF_DH_Cycl 96.1 0.014 3E-07 56.2 6.9 81 445-545 41-122 (168)
299 cd01075 NAD_bind_Leu_Phe_Val_D 96.1 0.019 4.2E-07 56.8 8.1 50 443-493 23-72 (200)
300 KOG1371 UDP-glucose 4-epimeras 96.1 0.019 4.2E-07 59.9 7.9 65 448-512 2-72 (343)
301 PTZ00075 Adenosylhomocysteinas 96.0 0.066 1.4E-06 59.4 12.5 143 443-595 249-416 (476)
302 PF01370 Epimerase: NAD depend 95.9 0.018 3.9E-07 57.3 7.0 60 451-512 1-60 (236)
303 PRK10084 dTDP-glucose 4,6 dehy 95.9 0.021 4.6E-07 61.0 7.7 63 450-512 2-68 (352)
304 PF05368 NmrA: NmrA-like famil 95.8 0.029 6.4E-07 56.3 8.1 59 451-512 1-61 (233)
305 PLN02494 adenosylhomocysteinas 95.8 0.14 3.1E-06 56.8 13.6 156 431-595 236-417 (477)
306 TIGR01746 Thioester-redct thio 95.8 0.014 3E-07 62.1 5.7 34 450-483 1-36 (367)
307 PRK06141 ornithine cyclodeamin 95.8 0.065 1.4E-06 56.9 10.7 111 425-539 94-219 (314)
308 PRK14175 bifunctional 5,10-met 95.7 0.041 8.8E-07 57.3 8.8 78 443-543 153-234 (286)
309 TIGR00936 ahcY adenosylhomocys 95.7 0.12 2.7E-06 56.5 12.6 58 431-489 177-235 (406)
310 PLN02695 GDP-D-mannose-3',5'-e 95.7 0.022 4.8E-07 61.8 6.8 62 446-510 19-80 (370)
311 PRK11908 NAD-dependent epimera 95.3 0.041 8.8E-07 58.9 7.3 59 449-509 2-62 (347)
312 PRK06046 alanine dehydrogenase 95.3 0.15 3.3E-06 54.3 11.5 148 395-543 66-229 (326)
313 PRK14194 bifunctional 5,10-met 95.3 0.051 1.1E-06 56.9 7.6 80 443-541 154-234 (301)
314 COG0451 WcaG Nucleoside-diphos 95.1 0.026 5.7E-07 58.8 5.0 36 450-485 2-37 (314)
315 PRK05865 hypothetical protein; 95.1 0.053 1.2E-06 64.6 7.8 57 450-512 2-58 (854)
316 PF03807 F420_oxidored: NADP o 95.0 0.067 1.4E-06 45.9 6.5 60 450-514 1-64 (96)
317 PF02826 2-Hacid_dh_C: D-isome 95.0 0.079 1.7E-06 51.3 7.7 86 445-539 33-127 (178)
318 COG2910 Putative NADH-flavin r 95.0 0.042 9.1E-07 53.0 5.4 142 450-596 2-202 (211)
319 TIGR01214 rmlD dTDP-4-dehydror 94.9 0.037 7.9E-07 57.2 5.4 32 450-481 1-32 (287)
320 COG0499 SAM1 S-adenosylhomocys 94.9 0.25 5.5E-06 52.4 11.1 157 431-597 191-372 (420)
321 COG0569 TrkA K+ transport syst 94.8 0.095 2.1E-06 52.9 7.8 61 449-512 1-62 (225)
322 PRK14106 murD UDP-N-acetylmura 94.7 0.058 1.3E-06 60.0 6.6 45 446-491 3-48 (450)
323 TIGR00518 alaDH alanine dehydr 94.7 0.062 1.3E-06 58.4 6.5 91 447-541 166-269 (370)
324 PF02254 TrkA_N: TrkA-N domain 94.7 0.12 2.7E-06 45.8 7.4 59 451-513 1-59 (116)
325 TIGR00521 coaBC_dfp phosphopan 94.6 0.064 1.4E-06 58.5 6.4 57 445-509 182-254 (390)
326 TIGR02371 ala_DH_arch alanine 94.4 0.28 6E-06 52.4 10.7 145 395-543 65-228 (325)
327 PRK08125 bifunctional UDP-gluc 94.4 0.076 1.6E-06 62.2 7.0 59 447-507 314-373 (660)
328 PF02882 THF_DHG_CYH_C: Tetrah 94.4 0.14 3E-06 48.8 7.3 79 442-539 30-108 (160)
329 PF01073 3Beta_HSD: 3-beta hyd 94.3 0.055 1.2E-06 56.4 5.0 60 452-512 1-63 (280)
330 KOG1370 S-adenosylhomocysteine 94.3 0.12 2.7E-06 53.3 7.2 142 446-598 212-378 (434)
331 PF02737 3HCDH_N: 3-hydroxyacy 94.3 0.089 1.9E-06 51.2 6.0 43 450-493 1-43 (180)
332 cd00401 AdoHcyase S-adenosyl-L 94.3 0.12 2.6E-06 56.7 7.6 59 431-490 184-243 (413)
333 PLN02260 probable rhamnose bio 94.3 0.1 2.2E-06 61.1 7.6 64 447-510 5-73 (668)
334 COG2084 MmsB 3-hydroxyisobutyr 94.2 0.29 6.3E-06 51.0 10.0 101 450-558 2-122 (286)
335 COG0604 Qor NADPH:quinone redu 94.2 0.15 3.2E-06 54.4 8.1 48 447-495 142-189 (326)
336 COG1087 GalE UDP-glucose 4-epi 94.2 0.11 2.3E-06 54.1 6.5 61 450-512 2-62 (329)
337 PLN00016 RNA-binding protein; 94.2 0.057 1.2E-06 58.6 4.9 39 446-484 50-92 (378)
338 PRK14188 bifunctional 5,10-met 93.8 0.3 6.5E-06 51.3 9.2 77 443-539 153-230 (296)
339 PRK06407 ornithine cyclodeamin 93.8 0.29 6.2E-06 51.7 9.2 115 426-543 88-218 (301)
340 PRK06823 ornithine cyclodeamin 93.8 0.48 1E-05 50.3 10.9 115 426-543 97-228 (315)
341 PF02423 OCD_Mu_crystall: Orni 93.8 0.23 5E-06 52.7 8.5 146 394-543 64-230 (313)
342 TIGR01915 npdG NADPH-dependent 93.6 0.15 3.2E-06 51.2 6.4 42 450-491 2-43 (219)
343 PLN02206 UDP-glucuronate decar 93.5 0.093 2E-06 58.4 5.2 36 446-481 117-152 (442)
344 cd08295 double_bond_reductase_ 93.5 0.23 4.9E-06 52.8 8.0 49 446-494 150-198 (338)
345 TIGR01777 yfcH conserved hypot 93.5 0.054 1.2E-06 55.8 3.1 35 451-485 1-35 (292)
346 PLN03154 putative allyl alcoho 93.4 0.25 5.4E-06 53.0 8.2 49 446-494 157-205 (348)
347 PF10520 Kua-UEV1_localn: Kua- 93.4 0.15 3.2E-06 49.3 5.5 58 209-271 97-157 (178)
348 PRK02472 murD UDP-N-acetylmura 93.3 0.098 2.1E-06 58.1 4.9 36 446-482 3-38 (447)
349 PRK09987 dTDP-4-dehydrorhamnos 93.3 0.11 2.4E-06 54.4 5.0 31 450-481 2-32 (299)
350 PF01210 NAD_Gly3P_dh_N: NAD-d 93.2 0.18 3.8E-06 47.8 5.9 41 450-491 1-41 (157)
351 PRK07201 short chain dehydroge 93.2 0.23 5E-06 57.9 8.0 56 450-505 2-62 (657)
352 PRK00066 ldh L-lactate dehydro 93.1 0.14 3E-06 54.4 5.5 69 445-514 3-76 (315)
353 PRK14190 bifunctional 5,10-met 93.1 0.32 6.9E-06 50.7 7.9 77 443-542 153-233 (284)
354 PRK14173 bifunctional 5,10-met 93.0 0.15 3.3E-06 53.1 5.4 76 443-539 150-227 (287)
355 PRK06199 ornithine cyclodeamin 93.0 0.56 1.2E-05 51.1 10.0 142 395-537 92-257 (379)
356 cd05291 HicDH_like L-2-hydroxy 92.9 0.11 2.5E-06 54.8 4.5 65 449-514 1-71 (306)
357 PLN02819 lysine-ketoglutarate 92.9 0.57 1.2E-05 57.1 10.7 64 446-511 567-644 (1042)
358 PRK15461 NADH-dependent gamma- 92.9 0.58 1.3E-05 49.2 9.7 41 450-491 3-43 (296)
359 PF12242 Eno-Rase_NADH_b: NAD( 92.8 0.23 5.1E-06 40.9 5.0 35 447-481 38-73 (78)
360 PLN02516 methylenetetrahydrofo 92.7 0.23 4.9E-06 52.1 6.2 76 443-539 162-239 (299)
361 KOG2733 Uncharacterized membra 92.7 0.18 3.9E-06 53.4 5.4 105 450-554 7-142 (423)
362 PRK07589 ornithine cyclodeamin 92.6 1.1 2.4E-05 48.1 11.5 116 425-543 98-231 (346)
363 PRK14179 bifunctional 5,10-met 92.6 0.37 8E-06 50.2 7.6 37 443-479 153-189 (284)
364 PF02558 ApbA: Ketopantoate re 92.6 0.22 4.9E-06 46.3 5.6 39 451-491 1-39 (151)
365 PRK14178 bifunctional 5,10-met 92.6 0.38 8.2E-06 50.0 7.6 48 443-490 147-194 (279)
366 PRK06718 precorrin-2 dehydroge 92.6 0.21 4.4E-06 49.6 5.5 45 445-490 7-52 (202)
367 PRK10669 putative cation:proto 92.4 0.3 6.5E-06 56.0 7.5 62 448-513 417-478 (558)
368 PLN02778 3,5-epimerase/4-reduc 92.4 0.17 3.8E-06 53.1 5.1 35 447-481 8-42 (298)
369 PRK14186 bifunctional 5,10-met 92.2 0.23 5E-06 52.0 5.5 76 443-539 153-230 (297)
370 PRK14172 bifunctional 5,10-met 92.2 0.35 7.6E-06 50.2 6.7 78 443-541 153-233 (278)
371 PLN02166 dTDP-glucose 4,6-dehy 92.2 0.2 4.3E-06 55.7 5.3 36 446-481 118-153 (436)
372 TIGR02825 B4_12hDH leukotriene 92.1 0.41 9E-06 50.4 7.6 48 446-494 137-184 (325)
373 PRK14183 bifunctional 5,10-met 92.1 0.49 1.1E-05 49.2 7.8 76 443-539 152-229 (281)
374 cd08294 leukotriene_B4_DH_like 92.1 0.46 1E-05 49.9 7.9 48 446-494 142-189 (329)
375 PRK00676 hemA glutamyl-tRNA re 92.1 0.23 4.9E-06 53.0 5.4 98 378-483 107-209 (338)
376 PRK14171 bifunctional 5,10-met 92.1 0.24 5.2E-06 51.6 5.4 76 443-539 154-231 (288)
377 cd01079 NAD_bind_m-THF_DH NAD 92.1 0.32 6.9E-06 47.7 5.9 37 445-481 59-95 (197)
378 PRK07819 3-hydroxybutyryl-CoA 92.0 0.34 7.4E-06 50.7 6.6 42 449-491 6-47 (286)
379 PRK09496 trkA potassium transp 92.0 0.48 1E-05 52.6 8.3 65 446-512 229-293 (453)
380 PRK14166 bifunctional 5,10-met 92.0 0.27 5.8E-06 51.1 5.7 74 443-539 152-229 (282)
381 cd08293 PTGR2 Prostaglandin re 92.0 0.33 7.1E-06 51.5 6.6 47 448-494 155-202 (345)
382 PRK14177 bifunctional 5,10-met 92.0 0.36 7.8E-06 50.2 6.6 75 442-539 153-231 (284)
383 PRK14180 bifunctional 5,10-met 92.0 0.27 5.9E-06 51.1 5.7 74 443-539 153-230 (282)
384 PLN02477 glutamate dehydrogena 92.0 0.26 5.7E-06 54.0 5.9 38 443-481 201-239 (410)
385 PRK09496 trkA potassium transp 91.8 0.52 1.1E-05 52.3 8.3 56 450-508 2-57 (453)
386 PRK14169 bifunctional 5,10-met 91.8 0.28 6.1E-06 51.0 5.6 76 443-539 151-228 (282)
387 PRK14174 bifunctional 5,10-met 91.8 0.46 1E-05 49.8 7.2 78 443-539 154-235 (295)
388 PRK14170 bifunctional 5,10-met 91.8 0.4 8.6E-06 49.9 6.6 74 443-539 152-229 (284)
389 PRK07530 3-hydroxybutyryl-CoA 91.8 0.34 7.3E-06 50.7 6.2 41 449-490 5-45 (292)
390 PRK09260 3-hydroxybutyryl-CoA 91.7 0.33 7.2E-06 50.7 6.2 42 449-491 2-43 (288)
391 PRK06035 3-hydroxyacyl-CoA deh 91.7 0.33 7.1E-06 50.8 6.1 41 449-490 4-44 (291)
392 PF13241 NAD_binding_7: Putati 91.7 0.15 3.3E-06 44.7 3.0 37 445-482 4-40 (103)
393 COG2130 Putative NADP-dependen 91.7 0.59 1.3E-05 48.7 7.6 67 428-494 129-197 (340)
394 PF00056 Ldh_1_N: lactate/mala 91.7 0.46 1E-05 44.2 6.4 43 450-492 2-46 (141)
395 PRK12320 hypothetical protein; 91.6 0.34 7.5E-06 56.7 6.6 52 450-507 2-53 (699)
396 TIGR02356 adenyl_thiF thiazole 91.4 0.32 7E-06 48.1 5.3 35 446-481 19-54 (202)
397 PRK12475 thiamine/molybdopteri 91.3 0.31 6.7E-06 52.3 5.5 36 446-482 22-58 (338)
398 PRK14193 bifunctional 5,10-met 91.3 0.46 1E-05 49.5 6.5 76 443-539 153-232 (284)
399 TIGR02114 coaB_strep phosphopa 91.2 0.31 6.7E-06 49.3 5.1 54 450-512 16-70 (227)
400 PRK04148 hypothetical protein; 91.2 0.75 1.6E-05 42.5 7.1 56 446-506 15-70 (134)
401 PRK14182 bifunctional 5,10-met 91.2 0.41 8.9E-06 49.7 6.0 76 443-539 152-229 (282)
402 PRK08293 3-hydroxybutyryl-CoA 91.1 0.42 9E-06 49.9 6.1 42 449-491 4-45 (287)
403 PLN02616 tetrahydrofolate dehy 91.1 0.47 1E-05 50.8 6.5 78 443-541 226-306 (364)
404 PLN02928 oxidoreductase family 91.1 0.46 9.9E-06 51.2 6.5 37 445-482 156-192 (347)
405 PRK06719 precorrin-2 dehydroge 91.1 0.26 5.7E-06 46.8 4.1 36 445-481 10-45 (157)
406 cd05276 p53_inducible_oxidored 91.0 0.62 1.3E-05 48.0 7.4 47 446-493 138-184 (323)
407 PRK11150 rfaD ADP-L-glycero-D- 91.0 0.25 5.5E-06 51.6 4.5 31 451-481 2-32 (308)
408 PRK14187 bifunctional 5,10-met 90.9 0.56 1.2E-05 49.0 6.7 78 443-541 155-235 (294)
409 TIGR01470 cysG_Nterm siroheme 90.9 0.4 8.7E-06 47.7 5.4 46 445-491 6-52 (205)
410 cd08259 Zn_ADH5 Alcohol dehydr 90.9 0.52 1.1E-05 49.3 6.7 43 446-488 161-203 (332)
411 PRK08655 prephenate dehydrogen 90.8 0.46 9.9E-06 52.8 6.4 44 450-493 2-45 (437)
412 PLN02897 tetrahydrofolate dehy 90.7 0.51 1.1E-05 50.3 6.3 78 443-541 209-289 (345)
413 PRK03562 glutathione-regulated 90.5 0.83 1.8E-05 53.1 8.4 62 447-512 399-460 (621)
414 PRK14181 bifunctional 5,10-met 90.5 0.62 1.3E-05 48.6 6.6 78 443-541 148-232 (287)
415 PRK09620 hypothetical protein; 90.5 0.41 8.8E-06 48.5 5.1 34 447-480 2-51 (229)
416 cd08289 MDR_yhfp_like Yhfp put 90.4 0.68 1.5E-05 48.5 7.0 46 447-493 146-191 (326)
417 PLN02545 3-hydroxybutyryl-CoA 90.4 0.52 1.1E-05 49.4 6.1 40 449-489 5-44 (295)
418 PF04321 RmlD_sub_bind: RmlD s 90.4 0.61 1.3E-05 48.7 6.6 60 450-509 2-67 (286)
419 cd08253 zeta_crystallin Zeta-c 90.3 0.61 1.3E-05 48.2 6.6 47 446-493 143-189 (325)
420 COG2423 Predicted ornithine cy 90.2 2.1 4.6E-05 45.7 10.4 118 425-543 99-231 (330)
421 PRK08328 hypothetical protein; 90.1 0.28 6E-06 49.7 3.6 42 446-488 25-67 (231)
422 PRK06522 2-dehydropantoate 2-r 90.1 0.53 1.1E-05 49.2 5.9 41 450-491 2-42 (304)
423 PRK05708 2-dehydropantoate 2-r 90.0 0.51 1.1E-05 49.8 5.7 41 450-491 4-44 (305)
424 PRK00141 murD UDP-N-acetylmura 90.0 0.59 1.3E-05 52.5 6.4 45 446-491 13-57 (473)
425 COG1648 CysG Siroheme synthase 89.9 0.61 1.3E-05 46.5 5.8 47 445-492 9-56 (210)
426 PRK01438 murD UDP-N-acetylmura 89.9 0.61 1.3E-05 52.4 6.5 38 444-482 12-49 (480)
427 PRK06130 3-hydroxybutyryl-CoA 89.8 0.68 1.5E-05 48.8 6.4 42 449-491 5-46 (311)
428 PRK14191 bifunctional 5,10-met 89.7 1.1 2.4E-05 46.8 7.6 74 443-539 152-229 (285)
429 KOG3007 Mu-crystallin [Amino a 89.7 1.6 3.5E-05 44.6 8.5 175 427-605 109-309 (333)
430 TIGR00561 pntA NAD(P) transhyd 89.7 0.99 2.1E-05 50.9 7.8 46 447-494 163-208 (511)
431 COG3268 Uncharacterized conser 89.7 0.59 1.3E-05 49.2 5.6 90 448-539 6-104 (382)
432 PRK07066 3-hydroxybutyryl-CoA 89.5 0.68 1.5E-05 49.3 6.1 42 448-490 7-48 (321)
433 PRK14168 bifunctional 5,10-met 89.5 0.56 1.2E-05 49.2 5.4 76 443-539 156-237 (297)
434 PLN02725 GDP-4-keto-6-deoxyman 89.5 0.33 7.1E-06 50.5 3.7 28 452-479 1-28 (306)
435 PRK08762 molybdopterin biosynt 89.4 0.49 1.1E-05 51.5 5.1 35 446-481 133-168 (376)
436 PRK06129 3-hydroxyacyl-CoA deh 89.4 0.67 1.4E-05 48.9 6.0 40 449-489 3-42 (308)
437 cd08266 Zn_ADH_like1 Alcohol d 89.3 1.2 2.6E-05 46.5 7.9 44 446-489 165-208 (342)
438 COG1090 Predicted nucleoside-d 89.3 0.33 7E-06 50.0 3.3 37 451-487 1-37 (297)
439 PRK13243 glyoxylate reductase; 89.3 1.1 2.5E-05 47.9 7.7 39 445-484 147-185 (333)
440 TIGR02197 heptose_epim ADP-L-g 89.1 0.36 7.7E-06 50.4 3.7 31 451-481 1-32 (314)
441 PTZ00354 alcohol dehydrogenase 89.1 1.5 3.3E-05 45.8 8.5 47 446-493 139-185 (334)
442 cd05191 NAD_bind_amino_acid_DH 89.0 0.89 1.9E-05 38.3 5.4 36 444-480 19-55 (86)
443 KOG0023 Alcohol dehydrogenase, 89.0 1.5 3.2E-05 46.2 7.9 67 441-512 176-243 (360)
444 COG4982 3-oxoacyl-[acyl-carrie 89.0 2.8 6.2E-05 47.5 10.5 39 443-481 391-430 (866)
445 PRK12480 D-lactate dehydrogena 88.9 1.6 3.5E-05 46.7 8.5 39 445-484 143-181 (330)
446 PF00899 ThiF: ThiF family; I 88.9 0.65 1.4E-05 42.6 4.8 33 448-481 2-35 (135)
447 PF04127 DFP: DNA / pantothena 88.8 0.6 1.3E-05 45.6 4.8 47 457-511 28-74 (185)
448 KOG1430 C-3 sterol dehydrogena 88.8 0.61 1.3E-05 50.2 5.1 66 447-512 3-73 (361)
449 COG0686 Ald Alanine dehydrogen 88.8 0.56 1.2E-05 49.0 4.6 87 449-539 169-268 (371)
450 TIGR02354 thiF_fam2 thiamine b 88.7 0.52 1.1E-05 46.6 4.3 35 446-481 19-54 (200)
451 cd08268 MDR2 Medium chain dehy 88.6 1.3 2.8E-05 45.9 7.5 47 446-493 143-189 (328)
452 PLN02858 fructose-bisphosphate 88.5 2.5 5.4E-05 53.6 11.0 177 371-558 233-447 (1378)
453 PRK14167 bifunctional 5,10-met 88.5 1 2.2E-05 47.2 6.5 78 443-541 152-236 (297)
454 TIGR02822 adh_fam_2 zinc-bindi 88.4 1.5 3.2E-05 46.7 7.8 47 446-494 164-210 (329)
455 KOG1198 Zinc-binding oxidoredu 88.4 2.3 5E-05 45.8 9.3 63 446-512 156-218 (347)
456 PRK14618 NAD(P)H-dependent gly 88.4 0.99 2.1E-05 48.0 6.5 42 449-491 5-46 (328)
457 PRK03659 glutathione-regulated 88.4 1.4 3.1E-05 51.1 8.2 61 448-512 400-460 (601)
458 COG1064 AdhP Zn-dependent alco 88.4 1.1 2.3E-05 47.9 6.6 48 446-495 165-212 (339)
459 KOG1203 Predicted dehydrogenas 88.3 0.7 1.5E-05 50.4 5.3 45 446-490 77-121 (411)
460 COG0190 FolD 5,10-methylene-te 88.3 1.7 3.7E-05 45.0 7.8 50 439-488 147-196 (283)
461 PRK10792 bifunctional 5,10-met 88.3 1.1 2.3E-05 46.9 6.4 76 443-539 154-231 (285)
462 COG0111 SerA Phosphoglycerate 88.1 0.86 1.9E-05 48.6 5.8 34 446-480 140-173 (324)
463 PRK07688 thiamine/molybdopteri 88.0 0.46 9.9E-06 51.0 3.6 35 446-481 22-57 (339)
464 TIGR02355 moeB molybdopterin s 88.0 0.39 8.5E-06 48.9 3.0 36 446-482 22-58 (240)
465 COG0334 GdhA Glutamate dehydro 87.9 1.1 2.3E-05 48.8 6.3 38 444-482 203-240 (411)
466 PRK15469 ghrA bifunctional gly 87.9 0.99 2.1E-05 47.9 6.0 37 446-483 134-170 (312)
467 TIGR02279 PaaC-3OHAcCoADH 3-hy 87.8 0.93 2E-05 51.3 6.1 42 448-490 5-46 (503)
468 PRK00094 gpsA NAD(P)H-dependen 87.8 1 2.2E-05 47.6 6.2 41 450-491 3-43 (325)
469 TIGR02824 quinone_pig3 putativ 87.7 1.6 3.5E-05 45.0 7.5 47 446-493 138-184 (325)
470 PRK14189 bifunctional 5,10-met 87.6 0.93 2E-05 47.3 5.5 76 443-539 153-230 (285)
471 cd05288 PGDH Prostaglandin deh 87.6 1.6 3.6E-05 45.6 7.6 48 446-493 144-191 (329)
472 PRK12921 2-dehydropantoate 2-r 87.5 0.93 2E-05 47.4 5.6 39 450-490 2-40 (305)
473 PRK11199 tyrA bifunctional cho 87.5 2 4.3E-05 46.8 8.2 37 446-482 96-132 (374)
474 PRK14620 NAD(P)H-dependent gly 87.4 1.1 2.3E-05 47.7 6.0 41 450-491 2-42 (326)
475 PLN02996 fatty acyl-CoA reduct 87.4 0.79 1.7E-05 51.8 5.2 37 446-482 9-48 (491)
476 TIGR03201 dearomat_had 6-hydro 87.3 1.3 2.7E-05 47.4 6.5 47 446-494 165-211 (349)
477 TIGR03366 HpnZ_proposed putati 87.3 2 4.3E-05 44.4 7.8 47 446-494 119-166 (280)
478 PRK14176 bifunctional 5,10-met 87.3 1.4 3E-05 46.1 6.4 76 443-539 159-236 (287)
479 PRK08268 3-hydroxy-acyl-CoA de 87.2 1.1 2.3E-05 51.0 6.1 42 447-489 6-47 (507)
480 cd08239 THR_DH_like L-threonin 87.1 2 4.3E-05 45.5 7.9 47 446-494 162-209 (339)
481 PRK09880 L-idonate 5-dehydroge 86.9 1.3 2.9E-05 47.2 6.4 47 446-494 168-215 (343)
482 PRK05808 3-hydroxybutyryl-CoA 86.9 1.3 2.7E-05 46.1 6.1 38 449-487 4-41 (282)
483 TIGR01692 HIBADH 3-hydroxyisob 86.9 2.6 5.5E-05 44.0 8.4 36 454-490 2-37 (288)
484 cd01076 NAD_bind_1_Glu_DH NAD( 86.7 2.4 5.2E-05 42.8 7.7 46 445-491 28-84 (227)
485 PLN02350 phosphogluconate dehy 86.6 2.5 5.3E-05 47.7 8.5 42 449-491 7-48 (493)
486 PLN02503 fatty acyl-CoA reduct 86.3 1.8 3.8E-05 50.1 7.3 37 446-482 117-156 (605)
487 TIGR01381 E1_like_apg7 E1-like 86.2 0.89 1.9E-05 52.3 4.8 34 447-481 337-371 (664)
488 PRK05690 molybdopterin biosynt 86.2 0.68 1.5E-05 47.3 3.6 35 446-481 30-65 (245)
489 PLN02306 hydroxypyruvate reduc 86.2 1.8 3.8E-05 47.4 6.9 37 445-482 162-199 (386)
490 cd05280 MDR_yhdh_yhfp Yhdh and 86.1 2.1 4.5E-05 44.7 7.3 47 447-494 146-192 (325)
491 cd08270 MDR4 Medium chain dehy 86.1 1.6 3.5E-05 45.1 6.4 46 447-493 132-177 (305)
492 PRK14185 bifunctional 5,10-met 86.1 2.1 4.5E-05 44.9 7.0 78 443-541 152-236 (293)
493 cd05188 MDR Medium chain reduc 86.1 2.4 5.3E-05 42.5 7.6 43 446-489 133-175 (271)
494 PRK07417 arogenate dehydrogena 86.0 1.3 2.8E-05 46.0 5.6 41 450-491 2-42 (279)
495 cd08243 quinone_oxidoreductase 86.0 2.4 5.3E-05 43.9 7.7 48 446-494 141-188 (320)
496 PRK06849 hypothetical protein; 85.9 1.4 3.1E-05 47.9 6.2 37 447-483 3-39 (389)
497 PRK08223 hypothetical protein; 85.8 0.62 1.3E-05 48.7 3.0 35 446-481 25-60 (287)
498 PLN02586 probable cinnamyl alc 85.7 2.1 4.5E-05 46.1 7.2 48 446-494 182-229 (360)
499 PRK07574 formate dehydrogenase 85.7 2.6 5.7E-05 46.0 7.9 37 445-482 189-225 (385)
500 PRK08644 thiamine biosynthesis 85.6 0.99 2.1E-05 45.1 4.3 35 446-481 26-61 (212)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=2.4e-158 Score=1277.02 Aligned_cols=612 Identities=38% Similarity=0.695 Sum_probs=582.0
Q ss_pred CCCCCCCCCCCCCCCceeeehhHHHHHHHhhhhhccc-CCccchhHhHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCC
Q 006768 1 MDAPLAAWPWDNLGMFKYVLYGPLVGKALYSWVYEDK-RIEYWCLHILIISVLRGLIHILWNSFSNMLFLNRARQINQRG 79 (632)
Q Consensus 1 ~~~~~~~~~w~~~g~~~y~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~~~~ 79 (632)
.||+||+|||++||+|||++++|++++++|+++.+.+ +.+.|++++++++++|++++|+|++++|+.+.++|+||++|+
T Consensus 4 ~pg~lt~wpW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~~~~ 83 (620)
T PLN02869 4 KPGILTDWPWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIVDKG 83 (620)
T ss_pred CCcccccCcccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeeeccC
Confidence 3899999999999999999999999999999887755 444599999999999999999999999999999999999999
Q ss_pred CChhcccccchhhHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhcccC
Q 006768 80 VDFKQIDNEWNWDNFILLQAAIASMGYYIFPCSESLPRWNTKGFIALQILHVAVSEPLYYVLHRHFHRNKYLFIHYHSLH 159 (632)
Q Consensus 80 ~~~~q~~~e~~~~n~~l~~~~~~~~~~~~~~~~~~~p~w~~~~~~~~~~~~~~~~d~~~Yw~HR~~H~~~~ly~~~H~~H 159 (632)
++++|+|||++||||+|++.++++++...+|..+.+|.|...|+++.+++|+++.||+|||+||++|+ +++||++|++|
T Consensus 84 i~f~QvDre~~wDd~iil~~l~~~~~~~~~p~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~-~~LYwr~HkvH 162 (620)
T PLN02869 84 IEFEQVDRERNWDDQILFNGILFYVGYMILPGASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHH-HYLYSRYHSHH 162 (620)
T ss_pred CCceeeccccccchHHHHHHHHHHHHHHhhhhhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHhhc
Confidence 99999999999999999999999999988899999999999999999999999999999999999999 99999999999
Q ss_pred CCCCCCChhhhHHhhH-HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHhhhcccceeeccccccccccchhhh
Q 006768 160 HSSPVPQIPTAGHATL-LEHIVLSAIVAIPILGSSIIGYGSISLIYGYILMFDFLRCLGHCNVEIIPHRWFETFPFLRYL 238 (632)
Q Consensus 160 H~~~~~~~~~~~~~hp-~E~~~~~~~~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l 238 (632)
|++.+|+|+++. .|| .|.+.+.+++.+|+++..+++..++.++++|+++.++.++++|||++++|+++++.+|+++|+
T Consensus 163 Hss~~~~P~Ts~-~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyl 241 (620)
T PLN02869 163 HSSIVTEPITSV-IHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYL 241 (620)
T ss_pred cCCCCCCchhhh-cCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchhe
Confidence 999999999987 566 577877777888998877778778999999999999999999999999899998888999999
Q ss_pred ccCcccccccccCCCCCcccCchhhhhhcCCCCCCChhhHhhhccccCCCCccCceEEeecccCcccccCccchhhhccC
Q 006768 239 LYTPTYHSLHHTEKDSNFCLFMPLFDALGNTLNSKSWEDHKKITSASGENVRVPDFVFLAHVVDVTASMHPPFVFRSLAS 318 (632)
Q Consensus 239 ~~tp~~H~lHH~~~~~Nyg~~~~~wD~lfGT~~~~~~~~~~~~~~~~~~~~~~~~~vfl~H~~~~~~~~~~~~~~~~~~~ 318 (632)
++||++|++||+++++|||.+|++||++|||+++++++++++...+.+ ++||||||||+||++|+||+|+|||||||
T Consensus 242 l~TPsfHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~~~~---~~pd~V~l~H~t~~~s~~h~~~~~~s~as 318 (620)
T PLN02869 242 MYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKRPE---EIPDVVHLTHLTTPDSIYHLRLGFASLAS 318 (620)
T ss_pred ecCchHHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhcCcc---cCCCEEEEeccCCHHHhhccchHHHHhcc
Confidence 999999999999999999999999999999999999999999887643 38999999999999999999999999999
Q ss_pred CCCCCccccCccchhHHHHHHHHHHhccceEEeeeecCCceeeEEeeccCCeecccCcchhHhHHHHHHHHHHHHHcCCc
Q 006768 319 LPYSPKLFMLPFWPLAFSAMFALWAWSKTFLISFYWLRGRLHQTWAVPRYGFQYFLPFAQTGINKQIEDAILRADRLGVK 398 (632)
Q Consensus 319 ~p~~~~~~~~~~~p~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~i~~~i~~ai~~a~~~g~~ 398 (632)
.||+++|||+||||+++++|+++|+||++|++|+|+++|+++|+|+||||++||++|+++++||++||+||.+||++|+|
T Consensus 319 ~p~~~~~~l~~~wp~~~~~m~~~w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~Gvk 398 (620)
T PLN02869 319 KPYISKWYLRLMWPVTSWSMMLTWIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVK 398 (620)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccccccccccCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEE
Q 006768 399 VLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLML 478 (632)
Q Consensus 399 v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~ 478 (632)
|+|||++||++++|++|+++++|||+|+|||+||||+|||+++|+||++.|.|++||++|++|+|+|.+||++|.+ +.
T Consensus 399 v~sLg~LNk~~~LN~~G~l~v~k~p~L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~sK~~raia~~lc~r~i~--~~ 476 (620)
T PLN02869 399 VLSLGLLNQGEELNRYGELYIHRNPKLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLSKVAYFIASALCQRGIQ--VA 476 (620)
T ss_pred EEechhcchhhhhcCCceEeeecCCCcceEEEeCCchHHHHHHHhcCCCCceEEEecCccHHHHHHHHHHHhcCCe--Ee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 45
Q ss_pred ecCHHHHHHHHHHcCC-CccEEEEeCCCHHHHHHHHhhhcCCccCccccccCCCCcEEEeeccCCccccCCCeEEecCCe
Q 006768 479 TLSTERFQKIQKEAPI-DCQNYLVQVTKYQAAQHSKTWIVGKWITPREQNWAPPGTHFHQFVVPPILHFRRDCTYGDLAA 557 (632)
Q Consensus 479 ~R~~e~l~~l~~~i~~-~~~~~~~Dvsd~~~~~~~di~~~g~~~~~~d~~~~~~G~vv~d~~~P~~~~~r~d~~~~~g~~ 557 (632)
..++|+.+++++|++. +.+.+.+.+++. .+++|++|++++++||.++++|+.|+++++||..+.|+||+|.++++
T Consensus 477 t~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~dC~Y~~~pa 552 (620)
T PLN02869 477 TFREDEYEKLNKKLPNTECGSKLLLSKNY----SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFYHTTPA 552 (620)
T ss_pred ecCHHHHHHHHHhccchhhhhhEEEeecc----CceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhccccccCCcc
Confidence 5689999999999987 667777777775 56789999999999999999999999999777766899999999999
Q ss_pred eeccCccccccccccCCCchhhhHHHHHHHHHhhhccCcccccccchhcHHHHHHHHHhcCCccccc
Q 006768 558 MRLPDDVEGLGICEYTMDRGVVHACHAGGVVHLLEGWTHHEVGAIDVDKIDLVWEAALKHGFKPVSS 624 (632)
Q Consensus 558 M~~P~~~~~~~s~~~~lp~~v~~ac~a~~il~aLEg~~~~e~G~I~v~~v~~i~~~a~~hGf~~~~~ 624 (632)
|.+|++++|++|||+|||||+|+||+|+|++||||||++|||| |||.+||++|+||+||||+|...
T Consensus 553 m~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~ 618 (620)
T PLN02869 553 MMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLI 618 (620)
T ss_pred ccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCC
Confidence 9999999999999999999999999999999999999999999 99999999999999999999653
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=3e-41 Score=307.60 Aligned_cols=164 Identities=58% Similarity=0.987 Sum_probs=153.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcCCccCccccccCC
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVGKWITPREQNWAP 530 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g~~~~~~d~~~~~ 530 (632)
|+++|+++++|+|+|.+||++|.+|++. ++++++.++.+++.+.+.+.+.+++..+ ++|++|++++++||.+++
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~~~~~Lv~~~~~~~----K~WlVGd~l~~~EQ~~Ap 74 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEECQSNLVQSTSYQA----KTWLVGDGLTEEEQKWAP 74 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHHhhccEEeecCCCc----eeEEeCCCCCHHHHhcCC
Confidence 5899999999999999999999999988 8899999999998887888888887643 789999999999999999
Q ss_pred CCcEEEeeccCCccccCCCeEEecCCeeeccCccccccccccCCCchhhhHHHHHHHHHhhhccCcccccccchhcHHHH
Q 006768 531 PGTHFHQFVVPPILHFRRDCTYGDLAAMRLPDDVEGLGICEYTMDRGVVHACHAGGVVHLLEGWTHHEVGAIDVDKIDLV 610 (632)
Q Consensus 531 ~G~vv~d~~~P~~~~~r~d~~~~~g~~M~~P~~~~~~~s~~~~lp~~v~~ac~a~~il~aLEg~~~~e~G~I~v~~v~~i 610 (632)
+|+.|++++.||..+.|+||+|..+++|.+|++++|++|||+|+|||+|+||+++||+||||||++|||| +++.+||++
T Consensus 75 ~Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG-~~v~~idkv 153 (164)
T PF12076_consen 75 KGTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECG-DDVDRIDKV 153 (164)
T ss_pred CCCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccC-cccccHHHH
Confidence 9999999995555558999999999999999999999999999999999999999999999999999999 789999999
Q ss_pred HHHHHhcCCcc
Q 006768 611 WEAALKHGFKP 621 (632)
Q Consensus 611 ~~~a~~hGf~~ 621 (632)
|+||++|||+|
T Consensus 154 W~AAl~HGF~P 164 (164)
T PF12076_consen 154 WEAALKHGFRP 164 (164)
T ss_pred HHHHHHcCCCC
Confidence 99999999997
No 3
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=100.00 E-value=3.9e-36 Score=299.17 Aligned_cols=235 Identities=19% Similarity=0.302 Sum_probs=191.1
Q ss_pred HHHhhhhhcccCCccchhHhHHHHHHHHHHH----HHHHHH--hcchhhhccCCCCCC-CCChhcccccchh--hHHHHH
Q 006768 27 KALYSWVYEDKRIEYWCLHILIISVLRGLIH----ILWNSF--SNMLFLNRARQINQR-GVDFKQIDNEWNW--DNFILL 97 (632)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~kI~~~-~~~~~q~~~e~~~--~n~~l~ 97 (632)
+.+|..+.+..+.+.|.....+..++..++| ..|+++ .+.+++++|||||++ +.+++++.++++. .||+++
T Consensus 12 q~~W~~l~~~f~~d~~l~~~~~~~~~~~~~y~l~~lpf~~iD~t~~~~~~~rYKIQp~k~~s~~~~~kc~k~vl~n~~~v 91 (283)
T KOG0873|consen 12 QPLWDYLYNTFSGDFLLLCVGGPFIVHELVYWLFCLPFIFIDVTNRPPFLRRYKIQPKKNPSLSKQLKCLKVVLLNHFLV 91 (283)
T ss_pred HHHHHHHHhhCCCceEEEeechhHHHHHHHHHHhcchheEeecccCcchhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3344433333333455555554444444444 444443 235889999999986 4577888888874 489999
Q ss_pred HHHHHHHHHhhh-----cCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhcccCCCCCCCChhhhHH
Q 006768 98 QAAIASMGYYIF-----PCSESLPRWNTKGFIALQILHVAVSEPLYYVLHRHFHRNKYLFIHYHSLHHSSPVPQIPTAGH 172 (632)
Q Consensus 98 ~~~~~~~~~~~~-----~~~~~~p~w~~~~~~~~~~~~~~~~d~~~Yw~HR~~H~~~~ly~~~H~~HH~~~~~~~~~~~~ 172 (632)
+.++..+.+... |...++|.|.. ++.++++++++.|+.+||.||++|+ +++||.+||+||++..|...++.|
T Consensus 92 ~~p~~~~~y~~~~~~~~~~~~plPt~~~--~l~~l~i~~liEd~~fY~~HRL~H~-~~~Yk~iHKvHHe~taPf~~sa~Y 168 (283)
T KOG0873|consen 92 VLPLTLVSYPFVEWFGLPSGAPLPSWKE--MLAQLVVFFLIEDIGFYWSHRLFHH-KWLYKYIHKVHHEYTAPFGLSAEY 168 (283)
T ss_pred HhhHHHHhHHHHHHhCCCcCCCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHhhhhcccCchhHhhhh
Confidence 888888777543 33466889988 8999999999999999999999998 999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHhhhcccceeeccccccccccchhhhccCcccccccccCC
Q 006768 173 ATLLEHIVLSAIVAIPILGSSIIGYGSISLIYGYILMFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHTEK 252 (632)
Q Consensus 173 ~hp~E~~~~~~~~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l~~tp~~H~lHH~~~ 252 (632)
+||+|+++.++. |++++.+++. |+.+.++|+++..+.++..||||++ |+++.+.+|+ ..++++||+||..+
T Consensus 169 aHp~E~~~lg~~---~~~~p~~~~~-H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pf----y~ga~~HD~HH~~f 239 (283)
T KOG0873|consen 169 AHPLEHLFLGLG---TVMGPALLCG-HVITLWIWIALRILETVESHSGYDF-PWSLSKLIPF----YGGAEHHDYHHLVF 239 (283)
T ss_pred cCHHHHHHcCCh---hhhhhHHhhh-HHHHHHHHHHHHHHHHhhccCCCCC-CccccccCcc----cCCCcccchhhhhc
Confidence 999999998885 5666666665 9999999999999999999999999 9999988887 35899999999999
Q ss_pred CCCcccCchhhhhhcCCCCCC
Q 006768 253 DSNFCLFMPLFDALGNTLNSK 273 (632)
Q Consensus 253 ~~Nyg~~~~~wD~lfGT~~~~ 273 (632)
.+||+..|++||+++||+...
T Consensus 240 ~~n~~~~f~~~D~i~GTd~~~ 260 (283)
T KOG0873|consen 240 IGNFASVFGYLDRIHGTDSTY 260 (283)
T ss_pred cccccchhHHHHHHhccCccH
Confidence 999999999999999999753
No 4
>PRK14982 acyl-ACP reductase; Provisional
Probab=100.00 E-value=8.7e-32 Score=282.48 Aligned_cols=298 Identities=19% Similarity=0.263 Sum_probs=223.9
Q ss_pred eEEeecccCccccc--CccchhhhccCCCCCCccccCccchhHHHHHHHHHHhccceEEeeeecC---CceeeEEee--c
Q 006768 294 FVFLAHVVDVTASM--HPPFVFRSLASLPYSPKLFMLPFWPLAFSAMFALWAWSKTFLISFYWLR---GRLHQTWAV--P 366 (632)
Q Consensus 294 ~vfl~H~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~f~~~~~~~~---~~~~~~~~i--p 366 (632)
|+||.|++++++.- ..+++|+.++ |.+. - .|...+||++++.+++ +...+.|.| |
T Consensus 2 f~fi~H~~~~~~~~~~~~~~~~~~~~--~~~l------------~----~~~~~~p~~~~~~~v~S~~g~~~eg~~i~~~ 63 (340)
T PRK14982 2 FGLIGHLTSLEHAQRVARELGYDEYA--DQDL------------D----FWCSAPPQLVDHIEVTSATGQTIEGKYIESC 63 (340)
T ss_pred EEEEeccCCHHHhHHHHhcCCccccC--hHhH------------H----HHhhCCCeEeeeEEEEeCCCCEEEEEEEeCC
Confidence 78999999999977 6677776555 3221 1 1333568888888775 446688875 6
Q ss_pred cCCeecccCcchhHhHHHHHHHHHHHHHcCCceeecccccccccccCCC-ceEEec-cCCCcc---ceecCchhhHHHHH
Q 006768 367 RYGFQYFLPFAQTGINKQIEDAILRADRLGVKVLSLAALNKNESLNGGG-TLFVDK-HPNLKV---RVVHGNTCTAAVIL 441 (632)
Q Consensus 367 ~~~~~~~~~~~~~~i~~~i~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g-~l~~~~-~p~l~v---~vtdG~sltaa~~~ 441 (632)
..+.|+ ...+.+...+.|.+|++.|++.|+++.+||++++ +..++ .+...+ -.++++ ++|+|||+|+++..
T Consensus 64 ~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~~~~~~~~~~r~i~ie~~~~TtGNs~T~~ll~ 139 (340)
T PRK14982 64 FLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFENFNLLQHKQVRNTTLEWERFTTGNTHTAYVIC 139 (340)
T ss_pred CCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCCcccccccccccceeccccccCCchhHHHHHH
Confidence 666455 5434455556668999999999999999999999 65444 322212 123455 68999999999865
Q ss_pred hhC---------CCCCcEEEEecCCchHHHHHHHHHHHc-C-CcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHH-HH
Q 006768 442 NEL---------PKDVKEVFLTGATSKLGRAIALYLCRK-R-VRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQ-AA 509 (632)
Q Consensus 442 ~~i---------~~~gk~vlVtGasgGIG~aiA~~La~~-G-~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~-~~ 509 (632)
+.+ ..++|+|+||||+|.||+.+|+.|+++ | .++++++|+.++++++++++.. .|+.+.+ .+
T Consensus 140 ~~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~------~~i~~l~~~l 213 (340)
T PRK14982 140 RQVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG------GKILSLEEAL 213 (340)
T ss_pred HHHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc------ccHHhHHHHH
Confidence 533 356899999999999999999999865 6 4899999999999998887642 1223333 23
Q ss_pred HHHHh--hhcCC----ccCccccccCCCCcEEEeeccCCccc---cCCCeEEecCCeeeccCccc-cccc-cccCCCchh
Q 006768 510 QHSKT--WIVGK----WITPREQNWAPPGTHFHQFVVPPILH---FRRDCTYGDLAAMRLPDDVE-GLGI-CEYTMDRGV 578 (632)
Q Consensus 510 ~~~di--~~~g~----~~~~~d~~~~~~G~vv~d~~~P~~~~---~r~d~~~~~g~~M~~P~~~~-~~~s-~~~~lp~~v 578 (632)
.++|+ +..+. .+++++ +.++.+++|+++|++.+ .+.|+.+++||.+..|+++. ++.. .+..+|.|+
T Consensus 214 ~~aDiVv~~ts~~~~~~I~~~~---l~~~~~viDiAvPRDVd~~v~~~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~ 290 (340)
T PRK14982 214 PEADIVVWVASMPKGVEIDPET---LKKPCLMIDGGYPKNLDTKVQGPGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQ 290 (340)
T ss_pred ccCCEEEECCcCCcCCcCCHHH---hCCCeEEEEecCCCCCCcccCCCCEEEEeCCccccCCCcCccHHHHHhccchhhH
Confidence 34454 22221 134433 68999999999999922 23899999999999999987 4432 346789999
Q ss_pred hhHHHHHHHHHhhhccCcc-cccc--cchhcHHHHHHHHHhcCCccc
Q 006768 579 VHACHAGGVVHLLEGWTHH-EVGA--IDVDKIDLVWEAALKHGFKPV 622 (632)
Q Consensus 579 ~~ac~a~~il~aLEg~~~~-e~G~--I~v~~v~~i~~~a~~hGf~~~ 622 (632)
.+||+||+|+++|||+.++ ++|+ |++++|++|.++|+||||+|.
T Consensus 291 ~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~ 337 (340)
T PRK14982 291 MFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPL 337 (340)
T ss_pred HHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999 9996 999999999999999999984
No 5
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.95 E-value=1.3e-28 Score=240.69 Aligned_cols=233 Identities=15% Similarity=0.098 Sum_probs=167.6
Q ss_pred hhhhhc--ccCCccchhHhHHHHHHHH-HHHHHHHHHhcchhhhccCCCCCCCCCh---hcccccchhhHHHHHHHHHHH
Q 006768 30 YSWVYE--DKRIEYWCLHILIISVLRG-LIHILWNSFSNMLFLNRARQINQRGVDF---KQIDNEWNWDNFILLQAAIAS 103 (632)
Q Consensus 30 ~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~kI~~~~~~~---~q~~~e~~~~n~~l~~~~~~~ 103 (632)
|+..++ ++++-++.+..+...-+.. ++|....+++. ...+.+.-....+.++ .|+.+|+..+-+.+.-+-++.
T Consensus 22 ~~~~lp~nl~~~~~~~ls~~~~~~~~g~ily~~~~~ls~-~fVf~~al~~~~~~~~~~~r~~~~ei~~av~A~pw~sll~ 100 (312)
T KOG0872|consen 22 YSATLPANLDEIFRQFLSLWLRVYLGGDILYFFSASLSY-FFVFDKALFVHPPFLKNPTRQMLMEIKTAVQALPWMSLLT 100 (312)
T ss_pred HhhcCCcchhhHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHhcccccccCcHHHHHHHHHHHHHhcchHHHHh
Confidence 444444 3344444444443333322 44544444433 2223333333333333 388899887755555444444
Q ss_pred HHHhhh---------cCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhcccCCCCCCCChhhhHH
Q 006768 104 MGYYIF---------PCSE--SLPRWNTKGFIALQILHVAVSEPLYYVLHRHFHRNKYLFIHYHSLHHSSPVPQIPTAGH 172 (632)
Q Consensus 104 ~~~~~~---------~~~~--~~p~w~~~~~~~~~~~~~~~~d~~~Yw~HR~~H~~~~ly~~~H~~HH~~~~~~~~~~~~ 172 (632)
++...+ -.++ ++|+ .. .+..+++++++.||.+||.||.+|+ +.+||+.|+.||++..++|+++.+
T Consensus 101 ~~~~~m~i~gyskl~d~i~~~~~gw-~~--~~~~i~~flfF~Df~iYw~HR~lH~-~~vy~~LH~~HH~~~~~tpfAsla 176 (312)
T KOG0872|consen 101 VPWFLMEIRGYSKLYDNIGILEYGW-FL--LFVSIFLFLFFTDFGIYWAHRELHH-RGVYKRLHKPHHIWNICTPFASLA 176 (312)
T ss_pred HHHHHHHHhhhHHhhhccCcccccH-HH--HHHHHHHHHHHHHHHHHHHHHHHhh-hHHHhhhcchhhhhhccCchhhhh
Confidence 444321 1123 4554 22 5677777788899999999999999 999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHhhhcccceeeccccccccccchhhhccCcccccccccCC
Q 006768 173 ATLLEHIVLSAIVAIPILGSSIIGYGSISLIYGYILMFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHTEK 252 (632)
Q Consensus 173 ~hp~E~~~~~~~~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l~~tp~~H~lHH~~~ 252 (632)
+||++.+++++ |..+..++-+.|..+.++...+..+++++.|.|... . +.+.++||++|..||.++
T Consensus 177 fhpidg~lqai----p~~I~~Fi~Plh~~t~L~l~~f~~iwt~~IHd~~~~-~---------l~~~ingaahHtvHH~~f 242 (312)
T KOG0872|consen 177 FHPIDGFLQAI----PYHIYPFIFPLHKVTYLSLFTFVNIWTISIHDGIYG-S---------LNPPINGAAHHTVHHTYF 242 (312)
T ss_pred cCcchhHhhhc----hhHheeeeecchHHHHHHHHHHHHhHheeeeccccc-c---------ccCccccccccceeeeeE
Confidence 99999998875 777777777778999999999999999999999775 1 344578999999999999
Q ss_pred CCCcccCchhhhhhcCCCCCCChhhHhhh
Q 006768 253 DSNFCLFMPLFDALGNTLNSKSWEDHKKI 281 (632)
Q Consensus 253 ~~Nyg~~~~~wD~lfGT~~~~~~~~~~~~ 281 (632)
+.|||.++.+|||+|||++.|..++++..
T Consensus 243 ~~NYG~~tilwDrmfgSfr~p~~~~~d~~ 271 (312)
T KOG0872|consen 243 DYNYGQYTILWDRMFGSFRAPDHEDFDIY 271 (312)
T ss_pred ecCCCcEEEeHHhccCcccCccccccchh
Confidence 99999999999999999999988777643
No 6
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.95 E-value=1.5e-27 Score=245.98 Aligned_cols=155 Identities=30% Similarity=0.424 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhcccCCCCCCCChhhhHHhhHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 006768 123 FIALQILHVAVSEPLYYVLHRHFHRNKYLFIHYHSLHHSSPVPQIPTAGHATLLEHIVLSAIVAIPILGSSIIGYGSISL 202 (632)
Q Consensus 123 ~~~~~~~~~~~~d~~~Yw~HR~~H~~~~ly~~~H~~HH~~~~~~~~~~~~~hp~E~~~~~~~~~ip~~~~~~~g~~~~~~ 202 (632)
+++++++.+++.|+.+||.||++|+ .++||++|+.||++.+|+++++.+.||+|.++......+|..+ +| .+..+
T Consensus 95 ~~l~~~~~~~~~D~~~Y~~HR~~H~-~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l---~~-~~~~~ 169 (271)
T COG3000 95 FALQLLLAFLFLDLGYYWAHRLLHR-VPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLL---LG-LSPVA 169 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHH---hc-CCHHH
Confidence 5777888888999999999999999 8999999999999999999999999999999998775555542 34 47778
Q ss_pred HHHHHHHHHHHhhhcccceeeccccccccccchhhhccCcccccccccCC--CCCcccCchhhhhhcCCCCCCChhhHhh
Q 006768 203 IYGYILMFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHTEK--DSNFCLFMPLFDALGNTLNSKSWEDHKK 280 (632)
Q Consensus 203 ~~~~~~~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l~~tp~~H~lHH~~~--~~Nyg~~~~~wD~lfGT~~~~~~~~~~~ 280 (632)
+..+.++..+.++++|||++. | .. +++++.++.+|++|++||+++ ++|||.++++|||+|||+.+++++.+++
T Consensus 170 ~~~~~~~~~~~~~~~H~~~~~-~-~~---~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~ 244 (271)
T COG3000 170 VALLFIFLLFWAVLIHSNLDL-P-LP---LGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDK 244 (271)
T ss_pred HHHHHHHHHHHHHHHhcCccc-c-CC---cccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCccc
Confidence 888999999999999999997 5 22 245666789999999999987 4999999999999999999999888888
Q ss_pred hccccCC
Q 006768 281 ITSASGE 287 (632)
Q Consensus 281 ~~~~~~~ 287 (632)
++.+.++
T Consensus 245 ~~~~~~~ 251 (271)
T COG3000 245 IGVKAKI 251 (271)
T ss_pred ccccccc
Confidence 7766554
No 7
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=99.89 E-value=7.4e-23 Score=201.18 Aligned_cols=241 Identities=23% Similarity=0.270 Sum_probs=177.6
Q ss_pred ecccCcchhHhHHHHHHHHHHHHHcCCceeecccccccccccCCCceE-EeccCCCc-cceecCchhhHHHHHh------
Q 006768 371 QYFLPFAQTGINKQIEDAILRADRLGVKVLSLAALNKNESLNGGGTLF-VDKHPNLK-VRVVHGNTCTAAVILN------ 442 (632)
Q Consensus 371 ~~~~~~~~~~i~~~i~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~-~~~~p~l~-v~vtdG~sltaa~~~~------ 442 (632)
..+....+.+.+| +.+|+++|++.|++|.+||++.+ +++|-+.. ..+.+.+. .++|+|||.|+-++..
T Consensus 83 e~~~s~pkaatrr-vl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e~t~~~~ttgns~Tayaa~r~Vl~~~ 158 (351)
T COG5322 83 EMLRSRPKAATRR-VLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVELTFTRFTTGNSHTAYAACRQVLKHF 158 (351)
T ss_pred HHHhhCHHHHHHH-HHHHHHHHHHcCCeEEeecchhh---hhccccccccccceEEEEEecccCCccchHHHHHHHHHHH
Confidence 4555444444444 57789999999999999999999 66533322 22223443 5799999999877543
Q ss_pred ---hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH-----HHHHHHHcCCCccEEEEeCCCHHHHHHHHh
Q 006768 443 ---ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTER-----FQKIQKEAPIDCQNYLVQVTKYQAAQHSKT 514 (632)
Q Consensus 443 ---~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~-----l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di 514 (632)
++.++..+|.|+||+|.||.++|+.|+.+++++.++.|+.++ ++.+.+++.... .-..|.+.+++.++
T Consensus 159 ~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~----i~s~d~~~~~e~i~ 234 (351)
T COG5322 159 AQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK----IMSLDYALPQEDIL 234 (351)
T ss_pred HHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe----eeeccccccccceE
Confidence 345567899999999999999999999999999998877654 333444443221 11124444433322
Q ss_pred -hh----cCCccCccccccCCCCcEEEeeccCCcc----ccCCCeEEecCCeeeccCccc-cccccccCCCchhhhHHHH
Q 006768 515 -WI----VGKWITPREQNWAPPGTHFHQFVVPPIL----HFRRDCTYGDLAAMRLPDDVE-GLGICEYTMDRGVVHACHA 584 (632)
Q Consensus 515 -~~----~g~~~~~~d~~~~~~G~vv~d~~~P~~~----~~r~d~~~~~g~~M~~P~~~~-~~~s~~~~lp~~v~~ac~a 584 (632)
|. .|..+.|.. +++|+.+.|-..|.+. ..++|+.+++|+.+.-|.++. ++.+ -.++|.+.+.||.|
T Consensus 235 v~vAs~~~g~~I~pq~---lkpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~-~~~~p~~~l~aClA 310 (351)
T COG5322 235 VWVASMPKGVEIFPQH---LKPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMK-IVGMPVRQLFACLA 310 (351)
T ss_pred EEEeecCCCceechhh---ccCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHH-HcccchhhHHHHHH
Confidence 32 344455544 9999999999999982 223789999999998888754 2322 24679999999999
Q ss_pred HHHHHhhhccCcc-cccc-cchhcHHHHHHHHHhcCCcccc
Q 006768 585 GGVVHLLEGWTHH-EVGA-IDVDKIDLVWEAALKHGFKPVS 623 (632)
Q Consensus 585 ~~il~aLEg~~~~-e~G~-I~v~~v~~i~~~a~~hGf~~~~ 623 (632)
|+++.++||+..+ |+|+ |.+++|+.+.++|.||||+|++
T Consensus 311 Etlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~ 351 (351)
T COG5322 311 ETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD 351 (351)
T ss_pred HHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999 9999 9999999999999999999963
No 8
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.88 E-value=9.1e-24 Score=200.27 Aligned_cols=147 Identities=26% Similarity=0.341 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhcccCCCCCCCChhhhHHhhHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 006768 123 FIALQILHVAVSEPLYYVLHRHFHRNKYLFIHYHSLHHSSPVPQIPTAGHATLLEHIVLSAIVAIPILGSSIIGYGSISL 202 (632)
Q Consensus 123 ~~~~~~~~~~~~d~~~Yw~HR~~H~~~~ly~~~H~~HH~~~~~~~~~~~~~hp~E~~~~~~~~~ip~~~~~~~g~~~~~~ 202 (632)
...+++..+++.|.+.|.+||.||-++.+|+.+|+.||+-.+|.+..+.+.||+|.++...+-+ -+...+.|- +.-+
T Consensus 122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~--gla~l~sgl-spr~ 198 (287)
T KOG0874|consen 122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGG--GLAFLLSGL-SPRT 198 (287)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhch--HHHHHHcCC-Cccc
Confidence 3557788889999999999999999899999999999999999999999999999998866421 111122343 4445
Q ss_pred HHHHHHHHHHHhhhcccceeeccccccccccchhhhccCcccccccccCC--CCCccc-CchhhhhhcCCCCCCChhhH
Q 006768 203 IYGYILMFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHTEK--DSNFCL-FMPLFDALGNTLNSKSWEDH 278 (632)
Q Consensus 203 ~~~~~~~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l~~tp~~H~lHH~~~--~~Nyg~-~~~~wD~lfGT~~~~~~~~~ 278 (632)
.++++.+.++-++.+||||-+ |-.+++. .+-+.+.+||+||..+ ++||+. ||++||+++||+.+.+.|..
T Consensus 199 aiifFtfaTiKTVDDHCGy~l-P~dpfqm-----~F~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~ 271 (287)
T KOG0874|consen 199 AIIFFTFATIKTVDDHCGYWL-PGDPFQM-----FFPNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR 271 (287)
T ss_pred eEEEEEeeeeeeecccccccc-CCCceeE-----eccCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence 556778888999999999998 8876653 2346899999999974 899997 79999999999988765543
No 9
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.71 E-value=1.4e-17 Score=148.98 Aligned_cols=112 Identities=28% Similarity=0.348 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCchhhHhhcccCCCCCCCChhhhHHhhHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 006768 129 LHVAVSEPLYYVLHRHFHRNKYLFIHYHSLHHSSPVPQIPTAGHATLLEHIVLSAIVAIPILGSSIIGYGSISLIYGYIL 208 (632)
Q Consensus 129 ~~~~~~d~~~Yw~HR~~H~~~~ly~~~H~~HH~~~~~~~~~~~~~hp~E~~~~~~~~~ip~~~~~~~g~~~~~~~~~~~~ 208 (632)
+.+++.|+++||+||++|+.+++| ++|+.||++++|+++++.+.+|+|.++..++ ++.++.+++..+..++.++.+
T Consensus 3 ~~~l~~d~~~Y~~HRl~H~~~~l~-~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (114)
T PF04116_consen 3 LGFLLWDFWEYWMHRLLHKIPFLW-RIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA 78 (114)
T ss_pred eeHHHHHHHHHHHHHHHhcCchHH-HHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence 456778999999999999636666 9999999999999999999999999988775 333333344457888888999
Q ss_pred HHHHHhhhcccceeeccccccccccchhhhccCccccccccc
Q 006768 209 MFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHT 250 (632)
Q Consensus 209 ~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l~~tp~~H~lHH~ 250 (632)
+..+.+.++|||+.. + ..+..+++..+|++|++||+
T Consensus 79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence 999999999999932 1 12456778889999999995
No 10
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.54 E-value=1.5e-14 Score=150.96 Aligned_cols=167 Identities=16% Similarity=0.130 Sum_probs=129.5
Q ss_pred HHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIA 465 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA 465 (632)
++++..+|+....+..+|++|+ .++++|++.++| |||.||..++.......++|+++|+|| ||+|+|+|
T Consensus 74 ~~v~~~ld~~~~~A~~iGavNT--i~~~~g~l~G~N--------TD~~G~~~~l~~~~~~~~~k~vlI~GA-GGagrAia 142 (289)
T PRK12548 74 SEAAKYMDELSPAARIIGAVNT--IVNDDGKLTGHI--------TDGLGFVRNLREHGVDVKGKKLTVIGA-GGAATAIQ 142 (289)
T ss_pred HHHHHHhhcCCHHHHHhCceeE--EEeECCEEEEEe--------cCHHHHHHHHHhcCCCcCCCEEEEECC-cHHHHHHH
Confidence 5778889999999999999999 345799999999 999999999976666678899999999 89999999
Q ss_pred HHHHHcCCc-EEEEecCH---HHHHHHHHHcCC---CccEEEEeCCCHHHHHH----HHh----hhcCCcc----Ccc-c
Q 006768 466 LYLCRKRVR-VLMLTLST---ERFQKIQKEAPI---DCQNYLVQVTKYQAAQH----SKT----WIVGKWI----TPR-E 525 (632)
Q Consensus 466 ~~La~~G~~-V~l~~R~~---e~l~~l~~~i~~---~~~~~~~Dvsd~~~~~~----~di----~~~g~~~----~~~-d 525 (632)
.+|++.|++ |.+++|+. ++++++++++.. .+....+|+++.++++. +|+ +.+|..- .+. +
T Consensus 143 ~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~ 222 (289)
T PRK12548 143 VQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKD 222 (289)
T ss_pred HHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCc
Confidence 999999985 99999996 788888877643 23344568877665533 243 4444321 122 3
Q ss_pred cccCCCCcEEEeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 526 QNWAPPGTHFHQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 526 ~~~~~~G~vv~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
...+.++.+++|.+ .|.+ +++| .+|.+++|..|.+-..
T Consensus 223 ~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~G~~ML~~Qa 266 (289)
T PRK12548 223 TSVFRKDLVVADTVYNPKKTKLLEDAEAAGCKTVGGLGMLLWQG 266 (289)
T ss_pred HHhcCCCCEEEEecCCCCCCHHHHHHHHCCCeeeCcHHHHHHHH
Confidence 34577888999999 8876 3444 8899999999976554
No 11
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=99.49 E-value=3.7e-14 Score=146.15 Aligned_cols=167 Identities=19% Similarity=0.146 Sum_probs=126.5
Q ss_pred HHHHHHHHHcCCceeecccccccccccC-CCceEEeccCCCccceecCchhhHHHHHhhC--CCCCcEEEEecCCchHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNG-GGTLFVDKHPNLKVRVVHGNTCTAAVILNEL--PKDVKEVFLTGATSKLGR 462 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~-~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i--~~~gk~vlVtGasgGIG~ 462 (632)
|+++..+|+....+.-+|++|+ .++. +|.+.++| |||.|+..++..... ...+++++|.|| ||.+|
T Consensus 71 e~~~~~lD~l~~~A~~iGAVNT--l~~~~~g~l~G~N--------TD~~G~~~~L~~~~~~~~~~~~~vlilGA-GGAar 139 (283)
T COG0169 71 EAALPLLDELSPRARLIGAVNT--LVREDDGKLRGYN--------TDGIGFLRALKEFGLPVDVTGKRVLILGA-GGAAR 139 (283)
T ss_pred HHHHHHHhcCCHHHHHhCCceE--EEEccCCEEEEEc--------CCHHHHHHHHHhcCCCcccCCCEEEEECC-cHHHH
Confidence 6778889999999999999999 3456 59999999 999999999987664 456899999999 99999
Q ss_pred HHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccEE-EEeCCCHHHHHHHHh----hhcCCccC----ccccccCCCC
Q 006768 463 AIALYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQNY-LVQVTKYQAAQHSKT----WIVGKWIT----PREQNWAPPG 532 (632)
Q Consensus 463 aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~-~~Dvsd~~~~~~~di----~~~g~~~~----~~d~~~~~~G 532 (632)
|++.+|++.|+ +|++++|+.+|++++++.++...... ..+..+.+...++|+ +.+|..-. +.+...++++
T Consensus 140 Av~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~ 219 (283)
T COG0169 140 AVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKG 219 (283)
T ss_pred HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcC
Confidence 99999999995 89999999999999999886432111 122333322223443 33332221 2223457899
Q ss_pred cEEEeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 533 THFHQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 533 ~vv~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
.++.|++ .|.+ ..+| .+|.+++|..|.+-..
T Consensus 220 ~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~Qa 256 (283)
T COG0169 220 AIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVHQA 256 (283)
T ss_pred CEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHHHH
Confidence 9999999 8877 3344 7899999999986544
No 12
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=99.46 E-value=2e-13 Score=141.78 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=124.2
Q ss_pred HHHHHHHHHcCCceeeccccccccccc-CCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLN-GGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAI 464 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~-~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~ai 464 (632)
++++..+|+....+..+||+|+ .++ .+|++.++| |||.||..++........+|+++|.|| ||.|||+
T Consensus 74 ~~~~~~lD~l~~~A~~iGAVNT--v~~~~~g~l~G~N--------TD~~Gf~~~L~~~~~~~~~k~vlilGa-GGaarAi 142 (283)
T PRK14027 74 QAVLPLLDEVSEQATQLGAVNT--VVIDATGHTTGHN--------TDVSGFGRGMEEGLPNAKLDSVVQVGA-GGVGNAV 142 (283)
T ss_pred HHHHHHhhhCCHHHHHhCCceE--EEECCCCcEEEEc--------CCHHHHHHHHHhcCcCcCCCeEEEECC-cHHHHHH
Confidence 6778889999999999999999 234 689999999 999999999975444567899999999 9999999
Q ss_pred HHHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccE---EEEeCCCHH-HHHHHHh----hhcCCcc---CccccccCCCC
Q 006768 465 ALYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQN---YLVQVTKYQ-AAQHSKT----WIVGKWI---TPREQNWAPPG 532 (632)
Q Consensus 465 A~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~---~~~Dvsd~~-~~~~~di----~~~g~~~---~~~d~~~~~~G 532 (632)
+..|++.|+ +|.+++|+.++++++++++...... ...+..+.+ ....+|+ +.+|..- .+.+...+.++
T Consensus 143 ~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~ 222 (283)
T PRK14027 143 AYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKD 222 (283)
T ss_pred HHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCC
Confidence 999999997 7999999999999998886432211 112222212 2233444 3444321 12233346778
Q ss_pred cEEEeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 533 THFHQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 533 ~vv~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
..++|.+ .|.+ .++| .+|.+++|..|.+-..
T Consensus 223 ~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa 259 (283)
T PRK14027 223 HWVGDVVYMPIETELLKAARALGCETLDGTRMAIHQA 259 (283)
T ss_pred cEEEEcccCCCCCHHHHHHHHCCCEEEccHHHHHHHH
Confidence 8999999 8876 3444 8999999999976543
No 13
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=99.45 E-value=1.4e-13 Score=143.14 Aligned_cols=167 Identities=17% Similarity=0.128 Sum_probs=126.0
Q ss_pred HHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIA 465 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA 465 (632)
++++..+|+....+..+|++|+ .++.+|++.++| |||.||..++........+|+|+|.|+ ||+|++++
T Consensus 75 ~~v~~~~D~~~~~A~~iGAvNT--v~~~~g~l~G~N--------TD~~G~~~~l~~~~~~~~~k~vlIlGa-GGaaraia 143 (284)
T PRK12549 75 QAVIPHLDELSDDARALGAVNT--VVFRDGRRIGHN--------TDWSGFAESFRRGLPDASLERVVQLGA-GGAGAAVA 143 (284)
T ss_pred HHHHHHhccCCHHHHHhCCceE--EEecCCEEEEEc--------CCHHHHHHHHHhhccCccCCEEEEECC-cHHHHHHH
Confidence 5677789999999999999999 346799999999 999999999975444567899999999 99999999
Q ss_pred HHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccEEE-EeCCCH-HHHHHHHh----hhcCCcc---CccccccCCCCcEE
Q 006768 466 LYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQNYL-VQVTKY-QAAQHSKT----WIVGKWI---TPREQNWAPPGTHF 535 (632)
Q Consensus 466 ~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~~-~Dvsd~-~~~~~~di----~~~g~~~---~~~d~~~~~~G~vv 535 (632)
..|++.|+ +|.+++|+.++++++++++........ ....+. +.++++|+ +.+|..- .+.+...+.++..+
T Consensus 144 ~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v 223 (284)
T PRK12549 144 HALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWV 223 (284)
T ss_pred HHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEE
Confidence 99999997 899999999999999888743221111 222332 23344454 3344221 12334457788899
Q ss_pred Eeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 536 HQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 536 ~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
+|++ .|.+ +++| .+|.+++|..|.+-..
T Consensus 224 ~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~~Qa 257 (284)
T PRK12549 224 ADIVYFPLETELLRAARALGCRTLDGGGMAVFQA 257 (284)
T ss_pred EEeeeCCCCCHHHHHHHHCCCeEecCHHHHHHHH
Confidence 9999 8877 3344 8999999999976554
No 14
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=99.42 E-value=2.9e-13 Score=140.71 Aligned_cols=166 Identities=18% Similarity=0.142 Sum_probs=124.9
Q ss_pred HHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCchhhHHHHH-hhCCCCCcEEEEecCCchHHHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVIL-NELPKDVKEVFLTGATSKLGRAI 464 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~-~~i~~~gk~vlVtGasgGIG~ai 464 (632)
++++..+|+....+..+|++|+ .++.+|++.++| |||.|+.+++.. .+....+|+++|+|+ ||+|+++
T Consensus 70 ~~~~~~~d~~~~~A~~igavNt--v~~~~g~l~G~N--------TD~~G~~~~l~~~~~~~~~~k~vlVlGa-Gg~a~ai 138 (278)
T PRK00258 70 EAAFALADELSERARLIGAVNT--LVLEDGRLIGDN--------TDGIGFVRALEERLGVDLKGKRILILGA-GGAARAV 138 (278)
T ss_pred HHHHHHhhcCCHHHHHhCCceE--EEeeCCEEEEEc--------ccHHHHHHHHHhccCCCCCCCEEEEEcC-cHHHHHH
Confidence 5677789999999999999999 236799999999 999999999975 355678899999998 9999999
Q ss_pred HHHHHHcC-CcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh----hhcCCc----cCccccccCCCCcEE
Q 006768 465 ALYLCRKR-VRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT----WIVGKW----ITPREQNWAPPGTHF 535 (632)
Q Consensus 465 A~~La~~G-~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di----~~~g~~----~~~~d~~~~~~G~vv 535 (632)
+.+|++.| .+|++++|+.++++++++++..... ...+....+.+..+|+ +..|.. ..+.+...++++..+
T Consensus 139 ~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v 217 (278)
T PRK00258 139 ILPLLDLGVAEITIVNRTVERAEELAKLFGALGK-AELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIV 217 (278)
T ss_pred HHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-eeecccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEE
Confidence 99999999 6999999999999999888753211 1112211122334454 223321 123334457888999
Q ss_pred Eeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 536 HQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 536 ~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
+|++ .|.. .+++ .+|.+++|..|.+-..
T Consensus 218 ~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~~Qa 251 (278)
T PRK00258 218 YDMIYGPLPTPFLAWAKAQGARTIDGLGMLVHQA 251 (278)
T ss_pred EEeecCCCCCHHHHHHHHCcCeecCCHHHHHHHH
Confidence 9999 8876 3344 8999999999976554
No 15
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=99.40 E-value=6.1e-13 Score=138.53 Aligned_cols=167 Identities=17% Similarity=0.113 Sum_probs=124.2
Q ss_pred HHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIA 465 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA 465 (632)
++++..+|+....+..+||+|+ .++.+|++.++| |||.||..++...+....+|+++|.|| ||.+||++
T Consensus 72 ~~~~~~~D~l~~~A~~iGAVNT--v~~~~g~l~G~N--------TD~~Gf~~~l~~~~~~~~~k~vlvlGa-GGaarAi~ 140 (288)
T PRK12749 72 QLACEYVDELTPAAKLVGAINT--IVNDDGYLRGYN--------TDGTGHIRAIKESGFDIKGKTMVLLGA-GGASTAIG 140 (288)
T ss_pred HHHHHHhccCCHHHHHhCceeE--EEccCCEEEEEe--------cCHHHHHHHHHhcCCCcCCCEEEEECC-cHHHHHHH
Confidence 5778889999999999999999 345799999999 999999999987777788999999998 99999999
Q ss_pred HHHHHcCC-cEEEEecC---HHHHHHHHHHcCCCcc--EEEEeCCCHH----HHHHHHh----hhcCCcc-----Ccccc
Q 006768 466 LYLCRKRV-RVLMLTLS---TERFQKIQKEAPIDCQ--NYLVQVTKYQ----AAQHSKT----WIVGKWI-----TPREQ 526 (632)
Q Consensus 466 ~~La~~G~-~V~l~~R~---~e~l~~l~~~i~~~~~--~~~~Dvsd~~----~~~~~di----~~~g~~~-----~~~d~ 526 (632)
..|+..|+ +|.+++|+ .+++++++++++.... ....+..+.+ .+.++|+ +.+|..- .+.+.
T Consensus 141 ~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~ 220 (288)
T PRK12749 141 AQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDI 220 (288)
T ss_pred HHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcH
Confidence 99999996 89999999 4688999887754221 1112222211 1223344 3444321 11223
Q ss_pred ccCCCCcEEEeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 527 NWAPPGTHFHQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 527 ~~~~~G~vv~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
..+.++.+++|.+ .|.+ +++| .+|.+++|..|.+-..
T Consensus 221 ~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~ML~~Qa 263 (288)
T PRK12749 221 SLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQG 263 (288)
T ss_pred HHCCCCCEEEEecCCCccCHHHHHHHHCCCeEECCHHHHHHHH
Confidence 3467889999999 8876 3344 8999999999976543
No 16
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=99.37 E-value=8.7e-13 Score=137.29 Aligned_cols=168 Identities=11% Similarity=-0.040 Sum_probs=121.9
Q ss_pred HHHHHHHHHcCCceeeccccccccccc-CCCceEEeccCCCccceecCchhhHHHHHhhC--CCCCcEEEEecCCchHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLN-GGGTLFVDKHPNLKVRVVHGNTCTAAVILNEL--PKDVKEVFLTGATSKLGR 462 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~-~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i--~~~gk~vlVtGasgGIG~ 462 (632)
++++..+|+....+..+|++|+ .++ ++|+++++| |||.||..++...+. +.++|+++|.|+ ||.|+
T Consensus 70 ~~~~~~~d~~~~~A~~iGAVNT--v~~~~~g~l~G~N--------TD~~G~~~~l~~~~~~~~~~~k~vlvlGa-GGaar 138 (282)
T TIGR01809 70 FAILRFADEHTDRASLIGSVNT--LLRTQNGIWKGDN--------TDWDGIAGALANIGKFEPLAGFRGLVIGA-GGTSR 138 (282)
T ss_pred HHHHHHhhcCCHHHHHhCceeE--EEEcCCCcEEEec--------CCHHHHHHHHHhhCCccccCCceEEEEcC-cHHHH
Confidence 5677889999999999999999 234 688999999 999999999976553 457899999999 99999
Q ss_pred HHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccEEEEeC-CCH-HHHHHHHh----hhcCCccCccccc--------
Q 006768 463 AIALYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQNYLVQV-TKY-QAAQHSKT----WIVGKWITPREQN-------- 527 (632)
Q Consensus 463 aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dv-sd~-~~~~~~di----~~~g~~~~~~d~~-------- 527 (632)
+++..|++.|+ +|.+++|+.+++++++++++........+. .+. +.+.++|+ +.+|..++.....
T Consensus 139 ai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~ 218 (282)
T TIGR01809 139 AAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLL 218 (282)
T ss_pred HHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhcc
Confidence 99999999997 799999999999999988753221111111 111 11123343 3444433322111
Q ss_pred -cCCCCcEEEeec-cCCc----cccC-CCeEEecCCeeeccCcc
Q 006768 528 -WAPPGTHFHQFV-VPPI----LHFR-RDCTYGDLAAMRLPDDV 564 (632)
Q Consensus 528 -~~~~G~vv~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~~ 564 (632)
...++..++|.+ .|.+ .+++ .+|.+++|..|.+-...
T Consensus 219 ~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~ 262 (282)
T TIGR01809 219 KRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLLHQGF 262 (282)
T ss_pred ccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHHHHHH
Confidence 124577889999 8876 3334 88999999999865543
No 17
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=99.35 E-value=1.3e-12 Score=134.86 Aligned_cols=159 Identities=14% Similarity=0.062 Sum_probs=119.6
Q ss_pred HHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIA 465 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA 465 (632)
++++..+|+....+..+|++|+ .++.+|++.++| |||.||..++...+.+ .+|+++|.|| ||.|||++
T Consensus 71 ~~~~~~lD~l~~~A~~iGAVNT--i~~~~g~l~G~N--------TD~~Gf~~~L~~~~~~-~~~~vlilGa-GGaarAi~ 138 (272)
T PRK12550 71 EAVIPLVDELDPSAQAIESVNT--IVNTDGHLKAYN--------TDYIAIAKLLASYQVP-PDLVVALRGS-GGMAKAVA 138 (272)
T ss_pred HHHHHHhhcCCHHHHHhCCeeE--EEeeCCEEEEEe--------cCHHHHHHHHHhcCCC-CCCeEEEECC-cHHHHHHH
Confidence 5678889999999999999999 346799999999 9999999999765554 4678999998 99999999
Q ss_pred HHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh----hhcCCc------cCccccccCCCCcE
Q 006768 466 LYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT----WIVGKW------ITPREQNWAPPGTH 534 (632)
Q Consensus 466 ~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di----~~~g~~------~~~~d~~~~~~G~v 534 (632)
.+|++.|+ +|.+++|+.++++++++++..... .+.. ...+|+ +.+|.. ..+.+...+.++..
T Consensus 139 ~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~---~~~~----~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~ 211 (272)
T PRK12550 139 AALRDAGFTDGTIVARNEKTGKALAELYGYEWR---PDLG----GIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASV 211 (272)
T ss_pred HHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcch---hhcc----cccCCEEEECCccccCCCCccccCCCCHHHcCCCCE
Confidence 99999997 699999999999999887642110 0010 011232 333321 11233445778889
Q ss_pred EEeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 535 FHQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 535 v~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
++|++ .|.+ .++| .+|.+++|..|.+-..
T Consensus 212 v~D~vY~P~~T~ll~~A~~~G~~~i~Gl~MLi~Qa 246 (272)
T PRK12550 212 VFDVVALPAETPLIRYARARGKTVITGAEVIALQA 246 (272)
T ss_pred EEEeecCCccCHHHHHHHHCcCeEeCCHHHHHHHH
Confidence 99999 8876 3444 8999999999976553
No 18
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.35 E-value=2.2e-11 Score=119.74 Aligned_cols=170 Identities=15% Similarity=0.077 Sum_probs=116.3
Q ss_pred ecCchhhHHHHHh----h-----CCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccE
Q 006768 430 VHGNTCTAAVILN----E-----LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQN 498 (632)
Q Consensus 430 tdG~sltaa~~~~----~-----i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~ 498 (632)
|+||++|++.+.+ . ...++++++|+||+|++|+++++.|++.|++|++++|+.++++++++++.. ....
T Consensus 1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~ 80 (194)
T cd01078 1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGV 80 (194)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcE
Confidence 6899999887543 2 256789999999999999999999999999999999999999998887642 2334
Q ss_pred EEEeCCCHHHHH----HHHh----hhcCCccCccccccCCCCcEEEeeccCCc-----cccCCCeEEecCCeeeccCccc
Q 006768 499 YLVQVTKYQAAQ----HSKT----WIVGKWITPREQNWAPPGTHFHQFVVPPI-----LHFRRDCTYGDLAAMRLPDDVE 565 (632)
Q Consensus 499 ~~~Dvsd~~~~~----~~di----~~~g~~~~~~d~~~~~~G~vv~d~~~P~~-----~~~r~d~~~~~g~~M~~P~~~~ 565 (632)
..+|..+.++.. ++|+ +..+............++.+++|...|++ .+.+.+..+++|+...-+ +.
T Consensus 81 ~~~~~~~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~--~~ 158 (194)
T cd01078 81 GAVETSDDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA--IG 158 (194)
T ss_pred EEeeCCCHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe--ec
Confidence 456777765543 3343 22233211112222345889999997666 234577788887632211 11
Q ss_pred cccccccCCCchhhhHHHHHHHHHhhhccCcccccccchhcHHHHHHHHHhc
Q 006768 566 GLGICEYTMDRGVVHACHAGGVVHLLEGWTHHEVGAIDVDKIDLVWEAALKH 617 (632)
Q Consensus 566 ~~~s~~~~lp~~v~~ac~a~~il~aLEg~~~~e~G~I~v~~v~~i~~~a~~h 617 (632)
..+++.++.++|++|.+. +|+... +.+++.+.|++|
T Consensus 159 -----~~g~~~~~~~~~~ae~~~--~~~~~~---------~~~~~~~~~~~~ 194 (194)
T cd01078 159 -----VGGLKMKTHRACIAKLFE--SNPLVL---------DAEEIYDLAKEM 194 (194)
T ss_pred -----cchhHHHHHHHHHHHHhh--cCCeee---------chHHHHHHHhcC
Confidence 367899999999998887 344322 256777777765
No 19
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=99.34 E-value=2.3e-12 Score=133.43 Aligned_cols=166 Identities=15% Similarity=0.091 Sum_probs=121.6
Q ss_pred HHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIA 465 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA 465 (632)
++++..+|+....+..+|++|+ .++.+|+++++| |||.|+..++........+|+++|+|+ ||+|++++
T Consensus 65 ~~~~~~~d~~~~~A~~~gavNt--i~~~~g~l~g~N--------TD~~G~~~~l~~~~~~~~~k~vliiGa-Gg~g~aia 133 (270)
T TIGR00507 65 EEAFQFLDEIDERAKLAGAVNT--LKLEDGKLVGYN--------TDGIGLVSDLERLIPLRPNQRVLIIGA-GGAARAVA 133 (270)
T ss_pred HHHHHHhhhCCHHHHHhCCceE--EEeeCCEEEEEc--------CCHHHHHHHHHhcCCCccCCEEEEEcC-cHHHHHHH
Confidence 5677889999999999999999 336789999999 999999999865444566899999999 89999999
Q ss_pred HHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh----hhcCCc--cC--ccccccCCCCcEEEe
Q 006768 466 LYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT----WIVGKW--IT--PREQNWAPPGTHFHQ 537 (632)
Q Consensus 466 ~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di----~~~g~~--~~--~~d~~~~~~G~vv~d 537 (632)
..|++.|++|.+++|+.++++++++++.........+..+ ....++|+ ...|.. .. +.+...+.++.+++|
T Consensus 134 ~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~-~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D 212 (270)
T TIGR00507 134 LPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE-LPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYD 212 (270)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh-hcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEE
Confidence 9999999999999999999999988865321111111111 11123444 222211 11 112234678999999
Q ss_pred ec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 538 FV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 538 ~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
.+ .|++ .+++ .+|.+++|..|.+-..
T Consensus 213 ~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~~Qa 244 (270)
T TIGR00507 213 MVYNPGETPFLAEAKSLGTKTIDGLGMLVAQA 244 (270)
T ss_pred eccCCCCCHHHHHHHHCCCeeeCCHHHHHHHH
Confidence 99 8876 3334 8899999999976554
No 20
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.29 E-value=1.2e-11 Score=122.75 Aligned_cols=67 Identities=24% Similarity=0.282 Sum_probs=61.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|.++|||||||||.|+|+.|+++|++|++++|+.+++++++++++ .++....+||+|.++++.+
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~ 71 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAA 71 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHH
Confidence 457999999999999999999999999999999999999999999998 4677778899999987544
No 21
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=99.17 E-value=4.6e-11 Score=134.54 Aligned_cols=163 Identities=18% Similarity=0.137 Sum_probs=119.8
Q ss_pred HHHHHHHHHcCCceeeccccccccccc--CCCceEEeccCCCccceecCchhhHHHHHh----------hCCCCCcEEEE
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLN--GGGTLFVDKHPNLKVRVVHGNTCTAAVILN----------ELPKDVKEVFL 453 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~--~~g~l~~~~~p~l~v~vtdG~sltaa~~~~----------~i~~~gk~vlV 453 (632)
++++..+|+....+..+||+|+. ++ .+|++.++| |||.|+..++... .....+|+++|
T Consensus 315 ~~v~~~lD~~~~~A~~iGAVNTv--v~~~~~g~l~G~N--------TD~~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlI 384 (529)
T PLN02520 315 EDALKCCDEVDPIAKSIGAINTI--IRRPSDGKLVGYN--------TDYIGAISAIEDGLRASGSSPASGSPLAGKLFVV 384 (529)
T ss_pred HHHHHHhccCCHHHHHhCCceEE--EEeCCCCEEEEEc--------ccHHHHHHHHHhhhcccccccccccCCCCCEEEE
Confidence 56677899999999999999992 23 278999999 9999999999632 23467899999
Q ss_pred ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHH--HHHHh----hhcCCcc----Cc
Q 006768 454 TGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAA--QHSKT----WIVGKWI----TP 523 (632)
Q Consensus 454 tGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~--~~~di----~~~g~~~----~~ 523 (632)
+|+ ||+|+++|..|+++|++|++++|+.+++++++++++.. .++..+.++. ..+++ +.+|... .+
T Consensus 385 lGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~----~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~p 459 (529)
T PLN02520 385 IGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ----ALTLADLENFHPEEGMILANTTSVGMQPNVDETP 459 (529)
T ss_pred ECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc----eeeHhHhhhhccccCeEEEecccCCCCCCCCCCc
Confidence 999 89999999999999999999999999999998887432 1223332211 11222 2333321 12
Q ss_pred cccccCCCCcEEEeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 524 REQNWAPPGTHFHQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 524 ~d~~~~~~G~vv~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
.+...+.++..++|.+ .|.+ .++| .||.+++|..|.+-..
T Consensus 460 l~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa 505 (529)
T PLN02520 460 ISKHALKHYSLVFDAVYTPKITRLLREAEESGAIIVSGTEMFIRQA 505 (529)
T ss_pred ccHhhCCCCCEEEEeccCCCcCHHHHHHHHCCCeEeCcHHHHHHHH
Confidence 3334467788999999 8876 3344 8899999999876543
No 22
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.13 E-value=2.5e-11 Score=123.67 Aligned_cols=68 Identities=19% Similarity=0.343 Sum_probs=61.1
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC----CccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~----~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+++++|||||||||+++|+.||++|.+|++++|++++++++++++.. ++....+|+++.+++...
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l 74 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERL 74 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence 35689999999999999999999999999999999999999999999864 356788899999888665
No 23
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=99.13 E-value=5e-11 Score=132.74 Aligned_cols=156 Identities=13% Similarity=0.086 Sum_probs=117.2
Q ss_pred HHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIA 465 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA 465 (632)
++++..+|+....+..+||+|+ .++++|+++++| |||.|+..++...+.+..+|+++|+|+ ||+|++++
T Consensus 280 ~~v~~~~d~~~~~A~~iGAVNT--v~~~~g~l~G~N--------TD~~G~~~~l~~~~~~~~~k~vlIiGa-GgiG~aia 348 (477)
T PRK09310 280 TAVLDFLDKLDPSVKLCGSCNT--LVFRNGKIEGYN--------TDGEGLFSLLKQKNIPLNNQHVAIVGA-GGAAKAIA 348 (477)
T ss_pred HHHHHHhccCCHHHHHhCcceE--EEeeCCEEEEEe--------cCHHHHHHHHHhcCCCcCCCEEEEEcC-cHHHHHHH
Confidence 5677889999999999999999 346799999999 999999999987777788999999997 89999999
Q ss_pred HHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh----hhcCCccCccccccCCCCcEEEeec-c
Q 006768 466 LYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT----WIVGKWITPREQNWAPPGTHFHQFV-V 540 (632)
Q Consensus 466 ~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di----~~~g~~~~~~d~~~~~~G~vv~d~~-~ 540 (632)
..|++.|++|.+++|+.+++++++++++.. ..+..+.++.+++|+ ...|..+. + .+. .+++|.+ .
T Consensus 349 ~~L~~~G~~V~i~~R~~~~~~~la~~~~~~----~~~~~~~~~l~~~DiVInatP~g~~~~--~--~l~--~~v~D~~Y~ 418 (477)
T PRK09310 349 TTLARAGAELLIFNRTKAHAEALASRCQGK----AFPLESLPELHRIDIIINCLPPSVTIP--K--AFP--PCVVDINTL 418 (477)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHHhccc----eechhHhcccCCCCEEEEcCCCCCcch--h--HHh--hhEEeccCC
Confidence 999999999999999999999888776421 112222222223343 22222221 1 122 3788999 8
Q ss_pred CCc----cccC-CCeEEecCCeeeccC
Q 006768 541 PPI----LHFR-RDCTYGDLAAMRLPD 562 (632)
Q Consensus 541 P~~----~~~r-~d~~~~~g~~M~~P~ 562 (632)
|++ .+++ .||.+++|..|.+-.
T Consensus 419 P~~T~ll~~A~~~G~~~~~G~~Ml~~Q 445 (477)
T PRK09310 419 PKHSPYTQYARSQGSSIIYGYEMFAEQ 445 (477)
T ss_pred CCCCHHHHHHHHCcCEEECcHHHHHHH
Confidence 876 3344 889999999887544
No 24
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.10 E-value=6.7e-11 Score=121.42 Aligned_cols=68 Identities=19% Similarity=0.376 Sum_probs=59.4
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc----CCC-ccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA----PID-CQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i----~~~-~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+|+|||||+|||+++|..|+++|++++++.|+.++++++++++ +.+ +...++|++|.++++++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~ 81 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF 81 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence 367999999999999999999999999999999999988888776664 334 77888999999999766
No 25
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.09 E-value=3.7e-09 Score=115.17 Aligned_cols=66 Identities=23% Similarity=0.246 Sum_probs=52.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+||||+++|+.|+++|++|++++|+++++++..++.........+|++|.+++++.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~ 242 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAEL 242 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHH
Confidence 467899999999999999999999999999999998877654433233345677899998887543
No 26
>PLN02434 fatty acid hydroxylase
Probab=98.99 E-value=7.9e-09 Score=103.34 Aligned_cols=135 Identities=23% Similarity=0.245 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HcCCCc------hhhHhhcccCCCCCCCChhhhHHhhHHHHHHHHHHHHHHHHHHhhc
Q 006768 123 FIALQILHVAVSEPLYYVLHR-HFHRNK------YLFIHYHSLHHSSPVPQIPTAGHATLLEHIVLSAIVAIPILGSSII 195 (632)
Q Consensus 123 ~~~~~~~~~~~~d~~~Yw~HR-~~H~~~------~ly~~~H~~HH~~~~~~~~~~~~~hp~E~~~~~~~~~ip~~~~~~~ 195 (632)
.+..++++++++.+.+|.+|| ++|.-+ .+...+|..||..+.-. ....+.|.-.++....+..++ ..++
T Consensus 83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P~D~--~rLv~PP~~~~~l~~~~~~l~--~~~~ 158 (237)
T PLN02434 83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHPMDG--LRLVFPPAATAILCVPFWNLI--ALFA 158 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCCCCC--CCeecCcHHHHHHHHHHHHHH--HHHc
Confidence 466677888899999999999 677411 23336788999765321 122233433332222211111 0111
Q ss_pred cch-----hHHHHHHHHHHHHHHhhhcccceeeccccccccccchhhhccCcccccccccCC-CCCcccCchhhhhhcCC
Q 006768 196 GYG-----SISLIYGYILMFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHTEK-DSNFCLFMPLFDALGNT 269 (632)
Q Consensus 196 g~~-----~~~~~~~~~~~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l~~tp~~H~lHH~~~-~~Nyg~~~~~wD~lfGT 269 (632)
+.. -...+.+|+.|-...-...|. . |.+ ++++. --++|..||.+. +.|||...++||++|||
T Consensus 159 ~~~~a~~~~~G~l~gYl~Yd~~Hy~lH~~--~--p~~-----~~~r~---lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT 226 (237)
T PLN02434 159 TPATAPALFGGGLLGYVMYDCTHYFLHHG--Q--PST-----DVLRN---LKKYHLNHHFRDQDKGFGITSSLWDRVFGT 226 (237)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhc--C--cch-----HHHHH---HHHHHHHHcCCCCCCCCCcCchHHHHhcCC
Confidence 110 122345666665555555552 2 321 22232 255999999875 99999999999999999
Q ss_pred CCCC
Q 006768 270 LNSK 273 (632)
Q Consensus 270 ~~~~ 273 (632)
+.++
T Consensus 227 ~~~~ 230 (237)
T PLN02434 227 LPPS 230 (237)
T ss_pred CCCc
Confidence 9554
No 27
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.87 E-value=3e-09 Score=99.66 Aligned_cols=159 Identities=15% Similarity=0.185 Sum_probs=100.7
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcCCccCcc
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVGKWITPR 524 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g~~~~~~ 524 (632)
.++|+.+++||+.-|||+++++.|++.|++|+.++|+++.++++.++.+.......+|+++.++..+.-. . ..|.
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~-~----v~pi 78 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLV-P----VFPI 78 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhc-c----cCch
Confidence 3689999999999999999999999999999999999999999999988777788889999888755410 0 1111
Q ss_pred ccccCCCCcEEE-eec-cCCccccC-CCeEEe-----------cCCeeeccCccccccccccCCCchhhhH-HHHHHHHH
Q 006768 525 EQNWAPPGTHFH-QFV-VPPILHFR-RDCTYG-----------DLAAMRLPDDVEGLGICEYTMDRGVVHA-CHAGGVVH 589 (632)
Q Consensus 525 d~~~~~~G~vv~-d~~-~P~~~~~r-~d~~~~-----------~g~~M~~P~~~~~~~s~~~~lp~~v~~a-c~a~~il~ 589 (632)
|....+.|.-.. ++. .....-.| -++++- +...-.+++++.|++|..---|-+--.+ |..++.+-
T Consensus 79 dgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALD 158 (245)
T KOG1207|consen 79 DGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALD 158 (245)
T ss_pred hhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHH
Confidence 222222222111 111 00000000 111110 0122245677888887322222221122 66667778
Q ss_pred hhhccCcccccc--cchhcHH
Q 006768 590 LLEGWTHHEVGA--IDVDKID 608 (632)
Q Consensus 590 aLEg~~~~e~G~--I~v~~v~ 608 (632)
.|......|+|+ |+|+.|.
T Consensus 159 mlTk~lAlELGp~kIRVNsVN 179 (245)
T KOG1207|consen 159 MLTKCLALELGPQKIRVNSVN 179 (245)
T ss_pred HHHHHHHHhhCcceeEeeccC
Confidence 888878889998 9998874
No 28
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.83 E-value=2.5e-08 Score=96.26 Aligned_cols=71 Identities=18% Similarity=0.309 Sum_probs=61.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhc
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIV 517 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~ 517 (632)
..|.+++||||++|||+++|+++.+.|-+|++++|+++++++.+++.+. .....||+.|.++.++.--|++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~-~~t~v~Dv~d~~~~~~lvewLk 73 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE-IHTEVCDVADRDSRRELVEWLK 73 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc-hheeeecccchhhHHHHHHHHH
Confidence 4678899999999999999999999999999999999999999988764 5677899999998876633444
No 29
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.83 E-value=1.9e-09 Score=110.00 Aligned_cols=67 Identities=19% Similarity=0.323 Sum_probs=60.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC--CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP--IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~--~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+.|+||||++|+||++|..+|++|+++++.+.|++..++..+++. +++..+.||++|.+++.+.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~ 104 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRL 104 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHH
Confidence 469999999999999999999999999999999999988888887765 3688999999999998554
No 30
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.79 E-value=4.8e-09 Score=108.01 Aligned_cols=68 Identities=21% Similarity=0.323 Sum_probs=59.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC----CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~----~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++..+.+|++|.++++.+
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~ 76 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERT 76 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence 3578999999999999999999999999999999999999888877653 3466788999999988665
No 31
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.79 E-value=8.5e-09 Score=106.66 Aligned_cols=68 Identities=25% Similarity=0.316 Sum_probs=59.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC------CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP------IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~------~~~~~~~~Dvsd~~~~~~~ 512 (632)
...||+++|||+++|||+++|+.|++.|++|++++|+++++++.++++. .++....+|+++.+++++.
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l 78 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKL 78 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHH
Confidence 4789999999999999999999999999999999999999988887753 2356778899988887655
No 32
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.79 E-value=2.1e-08 Score=105.53 Aligned_cols=95 Identities=16% Similarity=0.124 Sum_probs=71.3
Q ss_pred hhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-----CccEEEEeCCCHHHHHHHHhhh
Q 006768 442 NELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-----DCQNYLVQVTKYQAAQHSKTWI 516 (632)
Q Consensus 442 ~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-----~~~~~~~Dvsd~~~~~~~di~~ 516 (632)
+..+..+++++||||++|||+++|+.||++|++|++.+||.++.+++++++.. +....++|++|.++++.+....
T Consensus 29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~ 108 (314)
T KOG1208|consen 29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF 108 (314)
T ss_pred ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 34556789999999999999999999999999999999999999999888753 3455788999999998773222
Q ss_pred cCCccCccccccCCCCcEEEe
Q 006768 517 VGKWITPREQNWAPPGTHFHQ 537 (632)
Q Consensus 517 ~g~~~~~~d~~~~~~G~vv~d 537 (632)
. ....+.|....+.|...+.
T Consensus 109 ~-~~~~~ldvLInNAGV~~~~ 128 (314)
T KOG1208|consen 109 K-KKEGPLDVLINNAGVMAPP 128 (314)
T ss_pred H-hcCCCccEEEeCcccccCC
Confidence 2 2223334333455544443
No 33
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.71 E-value=3.5e-08 Score=101.29 Aligned_cols=63 Identities=24% Similarity=0.323 Sum_probs=55.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC----CccEEEEeCCCHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI----DCQNYLVQVTKYQA 508 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~----~~~~~~~Dvsd~~~ 508 (632)
..|+.++|||||.|||++.|+.||++|.+|++++|+++|++++++||.+ ++....+|.++.++
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~ 113 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE 113 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch
Confidence 4579999999999999999999999999999999999999999999864 46677789986544
No 34
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.71 E-value=1.8e-08 Score=104.54 Aligned_cols=66 Identities=18% Similarity=0.198 Sum_probs=54.7
Q ss_pred CCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecCH---HHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLST---ERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~~---e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+ +|||+++|+.|+++|++|++++|++ ++++++.++++.. ..+.+|++|.++++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~ 73 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSL 73 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHH
Confidence 468999999997 7999999999999999999999985 4566666666544 5678999999998665
No 35
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.65 E-value=3e-08 Score=101.31 Aligned_cols=66 Identities=11% Similarity=0.084 Sum_probs=54.0
Q ss_pred CCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+ +|||+++|++|+++|++|++++|++ +.++..+++. .++..+++|++|.++++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 73 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERA 73 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHH
Confidence 568999999998 7999999999999999999999984 4444445443 3456788999999998665
No 36
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.63 E-value=3e-08 Score=102.66 Aligned_cols=66 Identities=9% Similarity=0.045 Sum_probs=52.3
Q ss_pred CCCcEEEEecCCc--hHHHHHHHHHHHcCCcEEEEecCHHH---HHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATS--KLGRAIALYLCRKRVRVLMLTLSTER---FQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasg--GIG~aiA~~La~~G~~V~l~~R~~e~---l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||++ |||+++|++|+++|++|++++|+.+. ++++.++++. ...+.+|++|.+++++.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~ 75 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAV 75 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHH
Confidence 4689999999986 99999999999999999999998643 3444444432 23567899999998665
No 37
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.59 E-value=4.8e-08 Score=100.25 Aligned_cols=68 Identities=10% Similarity=0.111 Sum_probs=56.9
Q ss_pred CCCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecC---HHHHHHHHHHcC-CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLS---TERFQKIQKEAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~---~e~l~~l~~~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||+ +|||+++|+.|+++|++|++++|+ .++++++.++++ .++..+.+|++|.++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 77 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITAC 77 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHH
Confidence 3578999999997 899999999999999999998764 467788887774 3566778999999998665
No 38
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.5e-07 Score=99.57 Aligned_cols=67 Identities=13% Similarity=0.113 Sum_probs=58.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||++|||+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~ 83 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAAL 83 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHH
Confidence 568999999999999999999999999999999999998888777653 2456778999999999766
No 39
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.58 E-value=1.5e-07 Score=91.16 Aligned_cols=154 Identities=14% Similarity=0.123 Sum_probs=95.8
Q ss_pred CCcEEEEecCC-chHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcCCccCccc
Q 006768 447 DVKEVFLTGAT-SKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVGKWITPRE 525 (632)
Q Consensus 447 ~gk~vlVtGas-gGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g~~~~~~d 525 (632)
+.|.|+|||+| ||||.|+|+.+++.|++|..++|+.|...++..+.+ ...+.+|+++.+++....-.+....-...|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~g--l~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFG--LKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhC--CeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 56889999988 999999999999999999999999999888876654 568889999999986652111110111123
Q ss_pred cccCCCCcEEEeeccCCc------cccCCCeEEecCCeee---------ccCccccccccccCCC--chhhhHHHHHHHH
Q 006768 526 QNWAPPGTHFHQFVVPPI------LHFRRDCTYGDLAAMR---------LPDDVEGLGICEYTMD--RGVVHACHAGGVV 588 (632)
Q Consensus 526 ~~~~~~G~vv~d~~~P~~------~~~r~d~~~~~g~~M~---------~P~~~~~~~s~~~~lp--~~v~~ac~a~~il 588 (632)
....+.|.- ++.|.. .+.--++++.....|. .-+.++|++|.-...| -+.+|.+ .++.+
T Consensus 84 ~L~NNAG~~---C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsA-sKAAi 159 (289)
T KOG1209|consen 84 LLYNNAGQS---CTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSA-SKAAI 159 (289)
T ss_pred EEEcCCCCC---cccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhH-HHHHH
Confidence 333444432 122322 1111344444433331 2355777777433333 3444444 34467
Q ss_pred HhhhccCcccccc--cchhc
Q 006768 589 HLLEGWTHHEVGA--IDVDK 606 (632)
Q Consensus 589 ~aLEg~~~~e~G~--I~v~~ 606 (632)
||+..-..-|+.+ |+|.+
T Consensus 160 hay~~tLrlEl~PFgv~Vin 179 (289)
T KOG1209|consen 160 HAYARTLRLELKPFGVRVIN 179 (289)
T ss_pred HHhhhhcEEeeeccccEEEE
Confidence 8887766668887 66633
No 40
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.56 E-value=2e-07 Score=95.61 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=60.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.++++.++....+|++|.++++++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 70 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERA 70 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHH
Confidence 4689999999999999999999999999999999999999998888876677888999999988655
No 41
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.55 E-value=6.1e-08 Score=99.62 Aligned_cols=66 Identities=17% Similarity=0.153 Sum_probs=51.5
Q ss_pred CCCcEEEEecCCc--hHHHHHHHHHHHcCCcEEEEecCH---HHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATS--KLGRAIALYLCRKRVRVLMLTLST---ERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasg--GIG~aiA~~La~~G~~V~l~~R~~---e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||++ |||+++|+.|+++|++|++++|+. +.++++.++.+.. ....+|++|.++++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v~~~ 76 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCN-FVSELDVTNPKSISNL 76 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCc-eEEEccCCCHHHHHHH
Confidence 4689999999997 999999999999999999999884 2344444444322 3467899999998665
No 42
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.55 E-value=7.6e-08 Score=98.72 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=55.1
Q ss_pred CCCCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecCHH---HHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 444 LPKDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLSTE---RFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 444 i~~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~~e---~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+.++|+++||||+ +|||+++|+.|+++|++|++++|+.+ ++++++++++. ...+.+|++|.++++++
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~ 78 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDA-PIFLPLDVREPGQLEAV 78 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhcc-ceEEecCcCCHHHHHHH
Confidence 34678999999998 49999999999999999999999854 35666666543 44678999999998665
No 43
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.53 E-value=2.7e-07 Score=93.08 Aligned_cols=67 Identities=13% Similarity=0.218 Sum_probs=58.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||++|||+++|+.|+++|++|++++|++++++++.+++ +.+...+.+|++|.++++++
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~ 72 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHL 72 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHH
Confidence 56899999999999999999999999999999999999998887765 33455678899999988665
No 44
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.53 E-value=1e-07 Score=97.79 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=50.7
Q ss_pred CCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecC------HHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLS------TERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~------~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+ +|||+++|+.|+++|++|++++|+ ++.++++.++. .++..+.+|++|.+++++.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~ 77 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL-NPSLFLPCDVQDDAQIEET 77 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc-CcceEeecCcCCHHHHHHH
Confidence 578999999986 899999999999999999888654 33344443332 2345678899999998665
No 45
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.51 E-value=3.8e-07 Score=93.51 Aligned_cols=67 Identities=22% Similarity=0.226 Sum_probs=58.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.++.+.++..+.+|++|.++++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~ 69 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEA 69 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHH
Confidence 4689999999999999999999999999999999999998888776555566788999998887554
No 46
>PRK05717 oxidoreductase; Validated
Probab=98.50 E-value=3.7e-07 Score=93.12 Aligned_cols=70 Identities=20% Similarity=0.226 Sum_probs=61.2
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
....+||+++||||+||||+++|+.|+++|++|++++|+.++.+++.++++.++..+.+|++|.++++++
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAG 74 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHH
Confidence 3457799999999999999999999999999999999998888888777766667788999999888654
No 47
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.50 E-value=3.7e-07 Score=97.39 Aligned_cols=68 Identities=24% Similarity=0.304 Sum_probs=59.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||+||||+++|+.|+++|++|++++|++++++++.+++ +.++....+|++|.++++++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~ 74 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKAL 74 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Confidence 356899999999999999999999999999999999999998887765 33556678899999988665
No 48
>PRK06484 short chain dehydrogenase; Validated
Probab=98.49 E-value=9.8e-08 Score=107.84 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=60.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||++|||+++|+.|+++|++|++++|++++++++.++++.+.....+|++|.++++++
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 333 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESA 333 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHH
Confidence 4789999999999999999999999999999999999999999888876666788999999988665
No 49
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.49 E-value=3.1e-07 Score=93.60 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=59.1
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 76 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSM 76 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 4678999999999999999999999999999999999999888877763 3455678899999988655
No 50
>PRK06196 oxidoreductase; Provisional
Probab=98.49 E-value=4.5e-07 Score=95.84 Aligned_cols=71 Identities=13% Similarity=0.129 Sum_probs=61.5
Q ss_pred HhhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 441 LNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 441 ~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+..+..+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. ++....+|++|.++++++
T Consensus 19 ~~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~ 89 (315)
T PRK06196 19 LAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-GVEVVMLDLADLESVRAF 89 (315)
T ss_pred hcCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-hCeEEEccCCCHHHHHHH
Confidence 34556678999999999999999999999999999999999999888877764 366788999999988665
No 51
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.49 E-value=4.4e-07 Score=93.04 Aligned_cols=67 Identities=22% Similarity=0.258 Sum_probs=60.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|++++++++.++++.++....+|++|.++++.+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 70 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRA 70 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHH
Confidence 4689999999999999999999999999999999999999998888766677788999999888654
No 52
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.48 E-value=3.4e-07 Score=87.64 Aligned_cols=66 Identities=27% Similarity=0.310 Sum_probs=60.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccEEEEeCCCHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~~~~Dvsd~~~~~~ 511 (632)
...|.++||||++|||+|+|..|+++|++|++++++.+.+++.+..++. +.....|||++.++++.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~ 79 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQN 79 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHH
Confidence 4578999999999999999999999999999999999999999999976 66678999999998865
No 53
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.47 E-value=5.5e-07 Score=94.41 Aligned_cols=68 Identities=21% Similarity=0.244 Sum_probs=59.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||+||||+++|+.|+++|++|++++|++++++++.++++. ++....+|++|.++++++
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~ 75 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAA 75 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHH
Confidence 35789999999999999999999999999999999999999999888753 344456899999988665
No 54
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.47 E-value=1.8e-07 Score=96.93 Aligned_cols=66 Identities=12% Similarity=0.040 Sum_probs=54.5
Q ss_pred CCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecCH---HHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLST---ERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~~---e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+ +|||+++|+.|+++|++|++++|+. ++++++.++++. ...+.+|++|.++++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~ 78 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGA-FVAGHCDVTDEASIDAV 78 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCC-ceEEecCCCCHHHHHHH
Confidence 367999999996 8999999999999999999998873 566666666643 44678999999999766
No 55
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.46 E-value=5.6e-07 Score=92.77 Aligned_cols=66 Identities=21% Similarity=0.067 Sum_probs=58.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|++++++++.+++. ++....+|++|.++++++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~ 68 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAF 68 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHH
Confidence 467899999999999999999999999999999999999998887765 456778899999988554
No 56
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.45 E-value=4.7e-07 Score=92.60 Aligned_cols=67 Identities=19% Similarity=0.181 Sum_probs=58.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-----CccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-----~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|++++++++.+++.. ++....+|++|.++++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAA 76 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHH
Confidence 4689999999999999999999999999999999999999888877642 455678899999888654
No 57
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.44 E-value=6.2e-07 Score=91.96 Aligned_cols=68 Identities=15% Similarity=0.075 Sum_probs=58.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-----CccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-----~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.. ++..+.+|++|.++++++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 77 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAF 77 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHH
Confidence 46789999999999999999999999999999999999988877766532 445678899999988665
No 58
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.43 E-value=7.1e-07 Score=90.94 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=58.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|++++++++.+++. .++..+.+|++|.++++++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKAL 73 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence 468999999999999999999999999999999999999888877753 3456778899999988655
No 59
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.42 E-value=8e-07 Score=90.69 Aligned_cols=67 Identities=22% Similarity=0.222 Sum_probs=60.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.++.+++.+++..+.....+|++|.++++.+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 70 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRI 70 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHH
Confidence 5689999999999999999999999999999999999999998888766667788899999988655
No 60
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.42 E-value=7.7e-07 Score=93.24 Aligned_cols=68 Identities=19% Similarity=0.254 Sum_probs=58.4
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++..+.+|++|.++++++
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~ 107 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDAL 107 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 3567999999999999999999999999999999999999888877653 3455778899999888655
No 61
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.41 E-value=6.7e-07 Score=91.17 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=59.1
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC---CccEEEEeCCCHHHHHHH
Q 006768 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI---DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 444 i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~---~~~~~~~Dvsd~~~~~~~ 512 (632)
+...+|+++||||+||||+++|+.|+++|++|++.+|++++++++.+++.. ++....+|++|.++++++
T Consensus 6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~ 77 (255)
T PRK07523 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAA 77 (255)
T ss_pred cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHH
Confidence 346789999999999999999999999999999999999888877776643 356678899999888655
No 62
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.41 E-value=7.2e-07 Score=92.51 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=58.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC---CccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI---DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~---~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++.. ++....+|++|.++++++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~ 73 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHL 73 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 4689999999999999999999999999999999999988888777642 355678899999988655
No 63
>PRK08589 short chain dehydrogenase; Validated
Probab=98.41 E-value=8.6e-07 Score=91.60 Aligned_cols=66 Identities=21% Similarity=0.316 Sum_probs=56.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||++|||+++|+.|+++|++|++++|+ ++++++.+++. .++..+.+|++|.++++.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 72 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDF 72 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHH
Confidence 468999999999999999999999999999999999 77777776653 3466788999999888654
No 64
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.41 E-value=9.3e-07 Score=90.24 Aligned_cols=68 Identities=12% Similarity=0.143 Sum_probs=55.0
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH-HHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE-RFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e-~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+++||||++|||+++|++|+++|++|++++|+.. +.++..++.+.++....+|++|.++++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 73 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSI 73 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHH
Confidence 467899999999999999999999999999999988643 33333444455666788999999988665
No 65
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.40 E-value=8.2e-07 Score=94.34 Aligned_cols=60 Identities=17% Similarity=0.354 Sum_probs=52.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-----CccEEEEeCCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-----DCQNYLVQVTK 505 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-----~~~~~~~Dvsd 505 (632)
..|++++|||||||||+++|+.|+++|++|++++|++++++++++++.. ++....+|+++
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~ 115 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG 115 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC
Confidence 4589999999999999999999999999999999999999988877632 34566789984
No 66
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.39 E-value=9.5e-07 Score=94.39 Aligned_cols=68 Identities=25% Similarity=0.373 Sum_probs=59.1
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||+||||+++|+.|+++|++|++++|++++++++.+++. .++..+.+|++|.++++++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~ 75 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAA 75 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHH
Confidence 3568999999999999999999999999999999999999888877653 3566778899999988665
No 67
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.39 E-value=3.1e-07 Score=94.37 Aligned_cols=66 Identities=14% Similarity=0.113 Sum_probs=53.1
Q ss_pred CCCcEEEEecC--CchHHHHHHHHHHHcCCcEEEEec---CHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGA--TSKLGRAIALYLCRKRVRVLMLTL---STERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGa--sgGIG~aiA~~La~~G~~V~l~~R---~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++|||| ++|||+++|+.|+++|++|++++| ++++++++.++++. .....+|++|.++++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~ 74 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDAL 74 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHH
Confidence 46899999996 589999999999999999998754 45667777666543 33578899999999766
No 68
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.39 E-value=8.5e-07 Score=90.89 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=57.7
Q ss_pred CCCcEEEEecC--CchHHHHHHHHHHHcCCcEEEEecCH--HHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGA--TSKLGRAIALYLCRKRVRVLMLTLST--ERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGa--sgGIG~aiA~~La~~G~~V~l~~R~~--e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++|||| ++|||+++|+.|+++|++|++++|+. +.+++++++++.++..+.+|++|.++++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~ 75 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASL 75 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHH
Confidence 46899999999 89999999999999999999998764 557778777766667788999999998765
No 69
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.38 E-value=8.5e-07 Score=93.56 Aligned_cols=67 Identities=21% Similarity=0.099 Sum_probs=55.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH----------HHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST----------ERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~----------e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||++|||+++|++|+++|++|++++|+. ++++++++++ +.++....+|++|.++++++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 5689999999999999999999999999999999973 4566665554 23455678899999998765
No 70
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.38 E-value=1.2e-06 Score=88.65 Aligned_cols=63 Identities=19% Similarity=0.319 Sum_probs=55.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++++||||+||||+++|+.|+++|++|++++|++++++++.++. .++....+|++|.+++++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~ 64 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS-ANIFTLAFDVTDHPGTKAA 64 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-CCCeEEEeeCCCHHHHHHH
Confidence 67999999999999999999999999999999999988887653 3466788999999988665
No 71
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.37 E-value=8.8e-07 Score=83.99 Aligned_cols=64 Identities=27% Similarity=0.340 Sum_probs=54.8
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC--HHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS--TERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~--~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||++|||+++|+.|+++|. +|++++|+ .++.+++.++++ .++....+|+++.+++++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~ 70 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRAL 70 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccc
Confidence 7899999999999999999999976 78889999 778888876653 4567788899999998665
No 72
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.37 E-value=1.2e-06 Score=92.79 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=58.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 73 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRF 73 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHH
Confidence 468999999999999999999999999999999999999988888763 2456678899999988655
No 73
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.37 E-value=1.1e-06 Score=89.43 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=58.5
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||+||||+++|++|+++|++|++++|+.++++++.+++. .+.....+|++|.++++++
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~ 76 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAA 76 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHH
Confidence 4678999999999999999999999999999999999998888877764 2445667899999988655
No 74
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.37 E-value=8.6e-07 Score=83.52 Aligned_cols=131 Identities=15% Similarity=0.095 Sum_probs=91.9
Q ss_pred ecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH
Q 006768 430 VHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKR-VRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA 508 (632)
Q Consensus 430 tdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G-~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~ 508 (632)
||+-++..++...+...++++++|+|+ |++|+++++.|++.| .+|.+++|+.++.+++++++.... ...+.++.++
T Consensus 1 td~~g~~~a~~~~~~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~ 77 (155)
T cd01065 1 TDGLGFVRALEEAGIELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--IAIAYLDLEE 77 (155)
T ss_pred CCHHHHHHHHHhhCCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--cceeecchhh
Confidence 799999999987777678899999998 999999999999996 689999999999998888765321 1234445444
Q ss_pred -HHHHHhh--hcCCcc-----CccccccCCCCcEEEeec-cCCc----cccC-CCeEEecCCeeeccCc
Q 006768 509 -AQHSKTW--IVGKWI-----TPREQNWAPPGTHFHQFV-VPPI----LHFR-RDCTYGDLAAMRLPDD 563 (632)
Q Consensus 509 -~~~~di~--~~g~~~-----~~~d~~~~~~G~vv~d~~-~P~~----~~~r-~d~~~~~g~~M~~P~~ 563 (632)
++++|+. .+.... .+.....+++|+.++|.+ .|.. ...+ .++.+++|..|.+...
T Consensus 78 ~~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~~~q~ 146 (155)
T cd01065 78 LLAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEMLVYQA 146 (155)
T ss_pred ccccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHHHHHH
Confidence 3455541 111111 111112357899999999 7773 2223 7888888888876544
No 75
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=98.36 E-value=8.3e-07 Score=88.16 Aligned_cols=90 Identities=22% Similarity=0.220 Sum_probs=68.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCC-----cEEEEecCHHHHHHHHHHcCC-------CccEEEEeCCCHHHHHHHHhh
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRV-----RVLMLTLSTERFQKIQKEAPI-------DCQNYLVQVTKYQAAQHSKTW 515 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~-----~V~l~~R~~e~l~~l~~~i~~-------~~~~~~~Dvsd~~~~~~~di~ 515 (632)
.|+++|||++||+|.++|.+|.+..- ++++.+|+.+|+|++++++.+ ++..+++|+++.+++.++---
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 48899999999999999999988653 467789999999999888632 466788999999999665111
Q ss_pred hcCCccCccccccCCCCcEEEeeccCCccccCCCeEEecCCeeeccC
Q 006768 516 IVGKWITPREQNWAPPGTHFHQFVVPPILHFRRDCTYGDLAAMRLPD 562 (632)
Q Consensus 516 ~~g~~~~~~d~~~~~~G~vv~d~~~P~~~~~r~d~~~~~g~~M~~P~ 562 (632)
+... -.|.|+.|.|.+.|..|+
T Consensus 83 i~~r-------------------------f~~ld~iylNAg~~~~~g 104 (341)
T KOG1478|consen 83 IKQR-------------------------FQRLDYIYLNAGIMPNPG 104 (341)
T ss_pred HHHH-------------------------hhhccEEEEccccCCCCc
Confidence 1100 034788888888887776
No 76
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.36 E-value=1.2e-06 Score=89.52 Aligned_cols=65 Identities=25% Similarity=0.345 Sum_probs=57.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|++++|+.++++++.++++. ++....+|++|.++++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~ 68 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAA 68 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999888877643 456778899999988655
No 77
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.36 E-value=1.2e-06 Score=89.79 Aligned_cols=67 Identities=18% Similarity=0.300 Sum_probs=55.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEec-CHHHHHHHHHHcC----CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTL-STERFQKIQKEAP----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R-~~e~l~~l~~~i~----~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||++|||+++|+.|+++|++|++++| ++++++++.+++. .++....+|++|.++++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 77 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKEL 77 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 57899999999999999999999999999988864 6677776665542 3566788899999988665
No 78
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.36 E-value=1.2e-06 Score=92.26 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=56.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.++.++..+++. .++....+|++|.++++++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~ 85 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAA 85 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHH
Confidence 578999999999999999999999999999999999888776655542 2455678899999988655
No 79
>PLN02253 xanthoxin dehydrogenase
Probab=98.36 E-value=1.5e-06 Score=90.03 Aligned_cols=67 Identities=15% Similarity=0.167 Sum_probs=58.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.++.+++.++++. ++..+.+|++|.++++++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 84 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRA 84 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHH
Confidence 4689999999999999999999999999999999998888888777743 456778999999988665
No 80
>PRK06720 hypothetical protein; Provisional
Probab=98.35 E-value=1.7e-06 Score=83.24 Aligned_cols=67 Identities=21% Similarity=0.180 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||++|||+++|..|+++|++|++++|+.+++++..+++ +.+...+.+|+++.+++++.
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 83 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRV 83 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 57899999999999999999999999999999999988887776665 33455678899999888654
No 81
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.34 E-value=1.3e-06 Score=80.92 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=67.0
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH-HHHHHh----hhcC
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVR-VLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA-AQHSKT----WIVG 518 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~-V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~-~~~~di----~~~g 518 (632)
..++|+++|.|| ||+|++++.+|++.|++ |.+++|+.+++++++++++. .....++.++..+ .+++|+ +..+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~-~~~~~~~~~~~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG-VNIEAIPLEDLEEALQEADIVINATPSG 86 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG-CSEEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc-cccceeeHHHHHHHHhhCCeEEEecCCC
Confidence 467999999999 99999999999999985 99999999999999999832 2233446666553 344564 3333
Q ss_pred Cc-cCccccccCCCC----cEEEeeccCCcc
Q 006768 519 KW-ITPREQNWAPPG----THFHQFVVPPIL 544 (632)
Q Consensus 519 ~~-~~~~d~~~~~~G----~vv~d~~~P~~~ 544 (632)
+. +..+. +.+. .+++|.+.|++.
T Consensus 87 ~~~i~~~~---~~~~~~~~~~v~Dla~Pr~i 114 (135)
T PF01488_consen 87 MPIITEEM---LKKASKKLRLVIDLAVPRDI 114 (135)
T ss_dssp STSSTHHH---HTTTCHHCSEEEES-SS-SB
T ss_pred CcccCHHH---HHHHHhhhhceeccccCCCC
Confidence 32 22222 3333 489999999883
No 82
>PRK09186 flagellin modification protein A; Provisional
Probab=98.34 E-value=1.5e-06 Score=88.31 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=56.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-----CccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-----~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+||||+++|+.|+++|++|++++|++++++++.+++.. ......+|++|.++++++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEF 73 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHH
Confidence 579999999999999999999999999999999999998888777632 233458899999888654
No 83
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.34 E-value=1.6e-06 Score=88.32 Aligned_cols=67 Identities=19% Similarity=0.264 Sum_probs=57.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|++++++++.+++. .++....+|++|.++++.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANL 72 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHH
Confidence 467999999999999999999999999999999999988888877763 3456788899999888654
No 84
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.34 E-value=1.5e-06 Score=92.06 Aligned_cols=66 Identities=18% Similarity=0.167 Sum_probs=57.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHHHHHHHcCC---CccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKR-VRVLMLTLSTERFQKIQKEAPI---DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G-~~V~l~~R~~e~l~~l~~~i~~---~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||++|||+++|+.|+++| ++|++++|+.++++++++++.. .+....+|++|.++++++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 71 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQF 71 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHH
Confidence 47899999999999999999999999 9999999999999888887642 345667899999988665
No 85
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.33 E-value=1.6e-06 Score=87.81 Aligned_cols=67 Identities=21% Similarity=0.190 Sum_probs=58.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc--CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA--PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i--~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|+.++.++..+++ +.++....+|++|.++++++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEAL 71 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 56899999999999999999999999999999999998888777765 33456778899999988655
No 86
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.33 E-value=1.7e-06 Score=88.82 Aligned_cols=70 Identities=21% Similarity=0.243 Sum_probs=60.3
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++..+|+++||||++|||+++|+.|+++|++|++.+|+.++++++.+++. .++..+.+|++|.++++++
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 77 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAM 77 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 456788999999999999999999999999999999999988887776653 3566788999999998665
No 87
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.33 E-value=1.9e-06 Score=87.25 Aligned_cols=67 Identities=16% Similarity=0.118 Sum_probs=59.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|++++++++.++++.++....+|++|.+++...
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 70 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKAL 70 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHH
Confidence 4578999999999999999999999999999999999988888888876677788999998887554
No 88
>PRK06194 hypothetical protein; Provisional
Probab=98.32 E-value=1.6e-06 Score=89.90 Aligned_cols=67 Identities=15% Similarity=0.153 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.+++++..+++. .++..+.+|++|.++++++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 73 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEAL 73 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 357899999999999999999999999999999999888888777653 2455678899999888654
No 89
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.32 E-value=2.1e-06 Score=87.85 Aligned_cols=68 Identities=15% Similarity=0.242 Sum_probs=58.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC----CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~----~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++|||++||+|+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~ 75 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQL 75 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence 3568999999999999999999999999999999999998888776653 3456778899999888655
No 90
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.31 E-value=2.1e-06 Score=87.55 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=59.3
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+..++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .+.....+|++|.+++.++
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 78 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAA 78 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 345689999999999999999999999999999999999988888776653 3466778899999887554
No 91
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.31 E-value=2.1e-06 Score=87.97 Aligned_cols=67 Identities=22% Similarity=0.318 Sum_probs=58.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc--CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA--PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i--~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|++++++++.+++ +.+.....+|++|.++++.+
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 71 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAV 71 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 46789999999999999999999999999999999999988887775 33556778899999988665
No 92
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1.5e-06 Score=90.61 Aligned_cols=67 Identities=22% Similarity=0.256 Sum_probs=56.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH---------HHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST---------ERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~---------e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||++|||+++|+.|+++|++|++++|+. ++++++.+++. .++....+|++|.+++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 4689999999999999999999999999999998876 77777777763 3455677899999988665
No 93
>PRK05599 hypothetical protein; Provisional
Probab=98.31 E-value=1.6e-06 Score=88.30 Aligned_cols=63 Identities=16% Similarity=0.247 Sum_probs=54.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC----CccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~----~~~~~~~Dvsd~~~~~~~ 512 (632)
++++||||++|||+++|+.|+ +|.+|++++|++++++++++++.+ .+....+|++|.++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~ 67 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHREL 67 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHH
Confidence 468999999999999999999 599999999999999998887642 255678899999998766
No 94
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.31 E-value=2.1e-06 Score=87.33 Aligned_cols=68 Identities=16% Similarity=0.203 Sum_probs=58.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+++||||+||||+++++.|+++|++|++++|+.++++++.+++. .+.....+|++|.++++.+
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 75 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDAL 75 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 4678999999999999999999999999999999999988888777653 3456678899999888654
No 95
>PRK06484 short chain dehydrogenase; Validated
Probab=98.30 E-value=1.9e-06 Score=97.40 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=61.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||++|||+++|+.|+++|++|++++|+.++++++.++++.++..+.+|++|.++++++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 69 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREG 69 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHH
Confidence 4689999999999999999999999999999999999999999888877777788999999988665
No 96
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.30 E-value=1.7e-06 Score=88.53 Aligned_cols=63 Identities=19% Similarity=0.254 Sum_probs=55.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||++|||+++|+.|+++|++|++++|++++++++.+++.. ++....+|++|.++++++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~ 66 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNL 66 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHH
Confidence 689999999999999999999999999999999998888777642 456678899999988665
No 97
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.29 E-value=2.2e-06 Score=88.81 Aligned_cols=66 Identities=24% Similarity=0.254 Sum_probs=57.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+||||+++++.|+++|++|++++|+.++++++.+..+.++....+|++|.+++.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~ 68 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAV 68 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHH
Confidence 468899999999999999999999999999999999998888776555566778899999888554
No 98
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.29 E-value=1.5e-06 Score=89.07 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=55.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcC-CcEEEEecCHHH-HHHHHHHcCC----CccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKR-VRVLMLTLSTER-FQKIQKEAPI----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G-~~V~l~~R~~e~-l~~l~~~i~~----~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+||||+++|++|+++| ++|++++|+.++ ++++.+++.. ++....+|++|.+++++.
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~ 78 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKV 78 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHH
Confidence 46889999999999999999999996 899999999876 7777666532 466788999998887554
No 99
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.29 E-value=2.5e-06 Score=86.46 Aligned_cols=68 Identities=18% Similarity=0.158 Sum_probs=54.6
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH-HHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE-RFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e-~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..++|+++||||+||||+++|+.|+++|++|++++|+.. ++.+..++.+.++..+.+|++|.+++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 70 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKAL 70 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 357899999999999999999999999999999999752 33333344455567788999999988654
No 100
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.29 E-value=1.9e-06 Score=87.68 Aligned_cols=65 Identities=20% Similarity=0.279 Sum_probs=56.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .+.....+|++|.++++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 68 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKM 68 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 5899999999999999999999999999999999988888776653 3456778899999988665
No 101
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.28 E-value=2.6e-06 Score=87.09 Aligned_cols=64 Identities=27% Similarity=0.310 Sum_probs=57.1
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-CCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||||+++|+.|+++|++|++++|+.++++++.++++ .++....+|++|.++++++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 66 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAA 66 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 789999999999999999999999999999999999999888775 4566788999999888654
No 102
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.28 E-value=2.6e-06 Score=87.40 Aligned_cols=68 Identities=19% Similarity=0.228 Sum_probs=58.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. ..+....+|+++.++++++
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 77 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGL 77 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 3578999999999999999999999999999999999988888777653 3455678899999988654
No 103
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.28 E-value=2.4e-06 Score=86.48 Aligned_cols=67 Identities=19% Similarity=0.220 Sum_probs=58.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC--CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP--IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~--~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||+|+++|+.|+++|++|++++|+.++.+++.+++. .++....+|++|.++++++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAA 71 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 467899999999999999999999999999999999998888777664 3456778899999988655
No 104
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.27 E-value=3e-06 Score=86.25 Aligned_cols=68 Identities=25% Similarity=0.352 Sum_probs=58.6
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .+.....+|+++.+++++.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 76 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAA 76 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 4678999999999999999999999999999999999999888877652 3456778899999888654
No 105
>PRK09242 tropinone reductase; Provisional
Probab=98.27 E-value=2.6e-06 Score=86.90 Aligned_cols=68 Identities=18% Similarity=0.240 Sum_probs=58.0
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .+.....+|++|.++++++
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~ 78 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAI 78 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence 3578999999999999999999999999999999999998888877653 2455677899999888554
No 106
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.26 E-value=2.5e-06 Score=88.20 Aligned_cols=67 Identities=21% Similarity=0.231 Sum_probs=57.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++..+.+|++|.++++.+
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 77 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQA 77 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 568999999999999999999999999999999999988888877753 3456678899999888654
No 107
>PRK08643 acetoin reductase; Validated
Probab=98.26 E-value=2.2e-06 Score=87.28 Aligned_cols=65 Identities=20% Similarity=0.188 Sum_probs=56.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .+.....+|++|.++++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 69 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAA 69 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 6899999999999999999999999999999999988888777653 3455678899999988654
No 108
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.26 E-value=3.4e-06 Score=86.15 Aligned_cols=67 Identities=19% Similarity=0.273 Sum_probs=54.8
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH---cCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE---APIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~---i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+++||||+||||+++|+.|+++|++|++++|+ ++.+++.++ .+.++....+|++|.++++++
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 81 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKV 81 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4678999999999999999999999999999999998 444444443 344566788999999988654
No 109
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.26 E-value=3.2e-06 Score=85.93 Aligned_cols=67 Identities=18% Similarity=0.151 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++ +.+.....+|++|.++++++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 74 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKAL 74 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 56899999999999999999999999999999999998877766654 33466778899999888654
No 110
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.25 E-value=3.1e-06 Score=85.99 Aligned_cols=64 Identities=22% Similarity=0.246 Sum_probs=56.8
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++++||||+||+|+++|+.|+++|++|++++|++++++++.++++.++....+|++|.+++++.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~ 64 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEM 64 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHH
Confidence 3689999999999999999999999999999999999988887766677788999999888554
No 111
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.25 E-value=3.6e-06 Score=85.85 Aligned_cols=65 Identities=20% Similarity=0.098 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|++|+++|++|++++|+.++++++.+++.. ....+|++|.+++++.
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~ 69 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG--LFVPTDVTDEDAVNAL 69 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--cEEEeeCCCHHHHHHH
Confidence 4689999999999999999999999999999999999988888777653 4678899999888654
No 112
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.25 E-value=2.5e-06 Score=86.63 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=54.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||||+++|+.|+++|++|++++|++ ++++++.++...++....+|++|.+++++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 66 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETN 66 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHH
Confidence 6899999999999999999999999999999986 667766665555666788999999888654
No 113
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.25 E-value=3e-06 Score=85.79 Aligned_cols=65 Identities=20% Similarity=0.284 Sum_probs=55.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEV 71 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHH
Confidence 5789999999999999999999999999999999998888776643 2456678899999888654
No 114
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.24 E-value=3e-06 Score=86.61 Aligned_cols=68 Identities=21% Similarity=0.206 Sum_probs=58.4
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .+.....+|++|.++++++
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~ 79 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERL 79 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 4678999999999999999999999999999999999988887776653 3455778899999988554
No 115
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.24 E-value=3.3e-06 Score=87.17 Aligned_cols=65 Identities=22% Similarity=0.218 Sum_probs=57.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.|+++||||+||||+++|+.|+++|++|+++.|+.++++++.++.+.++....+|++|.++++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 66 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAV 66 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHH
Confidence 47899999999999999999999999999999999998888877766677788999999888554
No 116
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.9e-06 Score=87.93 Aligned_cols=63 Identities=16% Similarity=0.207 Sum_probs=54.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+. .+....+|++|.++++++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~---~~~~~~~Dl~d~~~~~~~ 65 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE---GLEAFQLDYAEPESIAAL 65 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC---CceEEEccCCCHHHHHHH
Confidence 468999999999999999999999999999999999988877653 355678899999888655
No 117
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.24 E-value=3.7e-06 Score=85.73 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=58.0
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..++|+++||||+||||+++|+.|+++|++|++++|+.++.+++.+++. .++....+|++|.++++++
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~ 78 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSAL 78 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 3578999999999999999999999999999999999988887766653 3456678899999988654
No 118
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.23 E-value=4.1e-06 Score=84.96 Aligned_cols=67 Identities=24% Similarity=0.247 Sum_probs=56.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEe-cCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLT-LSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~-R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++.. |+.++.+++.++++.++....+|++|.++++++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 70 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAM 70 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHH
Confidence 4678999999999999999999999999998865 467777777777765666788999999888655
No 119
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.23 E-value=3.4e-06 Score=86.08 Aligned_cols=68 Identities=22% Similarity=0.226 Sum_probs=56.3
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 444 i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++.++|+++||||+||||+++|+.|+++|++|++++|++++. ++.+++ ..++....+|+++.++++.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDA 73 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 457789999999999999999999999999999999988766 444443 33566788899999888654
No 120
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.23 E-value=4.3e-06 Score=84.24 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=59.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|+.|++.+|+.++++++.++++.++....+|++|.++++++
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 70 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKAL 70 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHH
Confidence 4678999999999999999999999999999999999999888777766666778999999988655
No 121
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.23 E-value=2.7e-06 Score=87.69 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=51.2
Q ss_pred CCCcEEEEecCCc--hHHHHHHHHHHHcCCcEEEEecCH---HHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATS--KLGRAIALYLCRKRVRVLMLTLST---ERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasg--GIG~aiA~~La~~G~~V~l~~R~~---e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||++ |||+++|+.|+++|++|++++|+. +.++++.++.+ ....+.+|++|.++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~ 74 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAM 74 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccC-CceEeecCCCCHHHHHHH
Confidence 4689999999985 999999999999999999999873 23333333322 345677899999999765
No 122
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.23 E-value=4e-06 Score=86.65 Aligned_cols=66 Identities=21% Similarity=0.163 Sum_probs=58.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+||||+++|+.|+++|.+|++++|+.++++++.+++...+....+|++|.++++++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 67 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAA 67 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHH
Confidence 368899999999999999999999999999999999999888877766677788999999888554
No 123
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.22 E-value=3.3e-06 Score=85.37 Aligned_cols=65 Identities=17% Similarity=0.300 Sum_probs=55.0
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc----CCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA----PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i----~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|++++|++++.+++.+++ ..++....+|++|.+++++.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 69 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAF 69 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHH
Confidence 368999999999999999999999999999999998887776654 23566778899999887554
No 124
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.22 E-value=3.3e-06 Score=86.83 Aligned_cols=68 Identities=21% Similarity=0.207 Sum_probs=57.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||+||||+++|+.|+++|++|++++|+.+++++..+++. .+.....+|++|.++++++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~ 76 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAA 76 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHH
Confidence 4678999999999999999999999999999999999888777665543 3445677899999888654
No 125
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.22 E-value=4.4e-06 Score=84.62 Aligned_cols=67 Identities=24% Similarity=0.273 Sum_probs=56.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|++++.+++.+++. .+.....+|++|.++++++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 73 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAM 73 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence 568999999999999999999999999999999999887777766652 2445678899999888654
No 126
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.22 E-value=4.3e-06 Score=84.92 Aligned_cols=66 Identities=24% Similarity=0.267 Sum_probs=57.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+|++|+++|+.|+++|.+|++++|+.++.+++.+++ +.++....+|++|.++++.+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 71 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAG 71 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence 5789999999999999999999999999999999999888877765 33566788899999988655
No 127
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.21 E-value=3e-06 Score=86.65 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=54.7
Q ss_pred EEEEecCCchHHHHHHHHHHH----cCCcEEEEecCHHHHHHHHHHcCC-----CccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCR----KRVRVLMLTLSTERFQKIQKEAPI-----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~----~G~~V~l~~R~~e~l~~l~~~i~~-----~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||++|||+++|+.|++ +|++|++++|++++++++.+++.. ++..+.+|++|.++++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~ 73 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQL 73 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHH
Confidence 589999999999999999997 799999999999999988877642 456678899999988665
No 128
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.21 E-value=4.2e-06 Score=85.36 Aligned_cols=68 Identities=22% Similarity=0.269 Sum_probs=55.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH-HHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE-RFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e-~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||++|||+++|+.|+++|++|++++|+.+ .++++.+++ +.++....+|++|.++++++
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~ 76 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAA 76 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 467899999999999999999999999999999998753 456555554 33456678899999988655
No 129
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.21 E-value=4.4e-06 Score=85.32 Aligned_cols=66 Identities=24% Similarity=0.312 Sum_probs=53.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|++. .+++.+++ +.+.....+|++|.+++++.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 74 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAA 74 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHH
Confidence 46899999999999999999999999999999999853 44454544 23455678899999887554
No 130
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.21 E-value=7.8e-07 Score=91.56 Aligned_cols=69 Identities=26% Similarity=0.325 Sum_probs=62.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc-CCCccEEEEeCCCHHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA-PIDCQNYLVQVTKYQAAQHSK 513 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i-~~~~~~~~~Dvsd~~~~~~~d 513 (632)
+..+|.|+|||+-+|.|+.+|+.|.++|.+|...+.+++..++++.+. ..+....++|||+.++++++.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~ 95 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAA 95 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHH
Confidence 457899999999999999999999999999999999999999999888 667777899999999998773
No 131
>PRK06182 short chain dehydrogenase; Validated
Probab=98.19 E-value=4.8e-06 Score=85.87 Aligned_cols=63 Identities=19% Similarity=0.248 Sum_probs=54.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+. .+....+|++|.++++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~---~~~~~~~Dv~~~~~~~~~ 64 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL---GVHPLSLDVTDEASIKAA 64 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhC---CCeEEEeeCCCHHHHHHH
Confidence 468999999999999999999999999999999999888776542 356778999999988654
No 132
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.18 E-value=4.4e-06 Score=85.20 Aligned_cols=67 Identities=25% Similarity=0.293 Sum_probs=56.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+|+||+++|+.|+++|++|++++|++++.+++.+++. .+.....+|++|.++++++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAG 74 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHH
Confidence 458999999999999999999999999999999999988887776653 2455677899999888554
No 133
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.18 E-value=5.3e-06 Score=83.41 Aligned_cols=67 Identities=16% Similarity=0.292 Sum_probs=57.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||.++++.|+++|++|++++|++++++++.+++.. .+....+|++|.++++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 71 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNV 71 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHH
Confidence 4689999999999999999999999999999999999988877665532 456678899999888554
No 134
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.18 E-value=6.7e-06 Score=83.61 Aligned_cols=67 Identities=22% Similarity=0.279 Sum_probs=54.1
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||+||||+++|+.|+++|++|++++|+.+..+ ..+++. .......+|++|.++++..
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~ 79 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAAQLLGGNAKGLVCDVSDSQSVEAA 79 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhhCCceEEEEecCCCHHHHHHH
Confidence 467899999999999999999999999999999999876533 333432 3445778899999988654
No 135
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.17 E-value=5.3e-06 Score=83.52 Aligned_cols=63 Identities=16% Similarity=0.110 Sum_probs=51.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|++++|++++..+..++.+ +..+.+|++|.++++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~ 64 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAG--AQCIQADFSTNAGIMAF 64 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC--CEEEEcCCCCHHHHHHH
Confidence 5789999999999999999999999999999998765443333332 45678899999888655
No 136
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.17 E-value=5.4e-06 Score=83.20 Aligned_cols=61 Identities=21% Similarity=0.295 Sum_probs=54.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||+||||+++|+.|+++|++|++++|++++++++++++. .....+|++|.++++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~ 62 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD--VDAIVCDNTDPASLEEA 62 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CcEEecCCCCHHHHHHH
Confidence 48999999999999999999999999999999999998887764 44678899999988665
No 137
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.17 E-value=6.6e-06 Score=83.18 Aligned_cols=67 Identities=16% Similarity=0.102 Sum_probs=57.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|++++++++.+++. .++..+.+|++|.++++++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRF 74 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 457999999999999999999999999999999999998887776653 3456778899999988655
No 138
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.16 E-value=5.3e-06 Score=83.74 Aligned_cols=66 Identities=18% Similarity=0.362 Sum_probs=56.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+||+|+++|+.|+++|.+|++++|++++.+++.+++. .++....+|++|.+++.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPG 73 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHH
Confidence 56899999999999999999999999999999999988877766543 3556678899999888554
No 139
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.16 E-value=5.3e-06 Score=85.29 Aligned_cols=66 Identities=15% Similarity=0.163 Sum_probs=51.2
Q ss_pred CCCcEEEEecC--CchHHHHHHHHHHHcCCcEEEEecCH---HHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGA--TSKLGRAIALYLCRKRVRVLMLTLST---ERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGa--sgGIG~aiA~~La~~G~~V~l~~R~~---e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++|||| ++|||+++|+.|+++|++|++++|+. ++++++.++.+. ...+.+|++|.+++++.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~ 74 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDS-ELVFRCDVASDDEINQV 74 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCC-ceEEECCCCCHHHHHHH
Confidence 46899999997 67999999999999999999987753 334444444332 34678899999998665
No 140
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.16 E-value=5.1e-06 Score=84.81 Aligned_cols=65 Identities=15% Similarity=0.158 Sum_probs=55.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+|+||+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 71 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLAL 71 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHH
Confidence 6889999999999999999999999999999999888877766542 2456778899999888654
No 141
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.15 E-value=5.6e-06 Score=87.24 Aligned_cols=69 Identities=22% Similarity=0.187 Sum_probs=56.4
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 444 i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
...++|+++||||+||||+++|+.|+++|++|++.+|+ .++.+++.+++. .++....+|++|.++++++
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~ 80 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADEL 80 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 44679999999999999999999999999999999874 456666666653 3556778899999888655
No 142
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.15 E-value=6.2e-06 Score=83.53 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=55.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEE-EecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLM-LTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l-~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++ ..|+.++.+++.+++ +.+...+.+|++|.++++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEM 72 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 35789999999999999999999999999876 578888877776665 34566678899999988654
No 143
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.15 E-value=6.4e-06 Score=84.95 Aligned_cols=67 Identities=15% Similarity=0.195 Sum_probs=56.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|+.++.++..+++. .+.....+|++|.+++++.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARA 76 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHH
Confidence 568999999999999999999999999999999999888877766653 2455677899998877543
No 144
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.15 E-value=5.1e-06 Score=85.08 Aligned_cols=67 Identities=19% Similarity=0.187 Sum_probs=55.8
Q ss_pred CCCcEEEEecCCc-hHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATS-KLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasg-GIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+| |||+++|+.|+++|++|++++|+.+++++..+++. .++....+|+++.++++++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 87 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDAL 87 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHH
Confidence 4579999999985 99999999999999999999999988877766542 2455677899999888655
No 145
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.14 E-value=7.8e-06 Score=82.10 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=57.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC--CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP--IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~--~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+++++||||+|++|+++|+.|+++|++|++++|++++++++.+++. .++..+.+|++|.+++++.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~ 72 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRA 72 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHH
Confidence 357899999999999999999999999999999999998888877764 3456678899999888554
No 146
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.14 E-value=7.2e-06 Score=82.93 Aligned_cols=67 Identities=25% Similarity=0.458 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+++++|||++||||+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.+++++.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEAT 72 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 468999999999999999999999999999999999988887776653 3556678899998887554
No 147
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.13 E-value=8.3e-06 Score=81.65 Aligned_cols=68 Identities=24% Similarity=0.255 Sum_probs=55.8
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
..++|+++||||+|+||+++|+.|+++|++|++++|+.++.++..+++. .......+|++|.++++.+
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRA 72 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHH
Confidence 3568999999999999999999999999999999999887766655543 2345667899998888554
No 148
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.13 E-value=6.5e-06 Score=83.82 Aligned_cols=63 Identities=14% Similarity=0.071 Sum_probs=52.5
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||+||||+++|+.|+++|++|++++|+.++ +..+.++....+|++|.++++++
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~ 65 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAAL 65 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHH
Confidence 4578999999999999999999999999999999998765 12233456778899999888655
No 149
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.13 E-value=8.8e-06 Score=82.95 Aligned_cols=65 Identities=17% Similarity=0.200 Sum_probs=56.4
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-CccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++.. ++....+|++|.++++..
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 67 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAA 67 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 57899999999999999999999999999999999998888877643 456678999999988543
No 150
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.12 E-value=8.4e-06 Score=82.92 Aligned_cols=66 Identities=20% Similarity=0.149 Sum_probs=53.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEe-cCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLT-LSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~-R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+||||+++|+.|+++|++|++.. |+.++.+++.+++. .+.....+|+++.++++..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEAL 72 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHH
Confidence 579999999999999999999999999998875 66777777666552 3455677899998887554
No 151
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.10 E-value=1e-05 Score=82.87 Aligned_cols=67 Identities=22% Similarity=0.247 Sum_probs=54.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+ .+..+++.+++ ..++....+|++|.+++++.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~ 75 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNL 75 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHH
Confidence 578999999999999999999999999999998884 45555555554 23455678899999888654
No 152
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.10 E-value=5e-06 Score=78.15 Aligned_cols=67 Identities=22% Similarity=0.210 Sum_probs=61.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|-+.+|||+.||+|++.|+.|+++|++|++.+....+.++.+++++.++.....|++++++++.+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aa 73 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAA 73 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHH
Confidence 4678899999999999999999999999999999999999999999999998999999999988655
No 153
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.10 E-value=1e-05 Score=81.91 Aligned_cols=66 Identities=17% Similarity=0.286 Sum_probs=56.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+|+||+++|+.|+++|++|++++|+.++.+++.+++ ..++....+|++|.++++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 70 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTA 70 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence 5789999999999999999999999999999999998887776654 33566778899999888665
No 154
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.10 E-value=9.8e-06 Score=82.38 Aligned_cols=67 Identities=19% Similarity=0.190 Sum_probs=55.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEE-ecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLML-TLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~-~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++. +|+.+++++..+++. .+...+.+|++|.+++.++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~ 74 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKL 74 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHH
Confidence 357899999999999999999999999998774 788888777766653 3456678899999988654
No 155
>PRK12742 oxidoreductase; Provisional
Probab=98.09 E-value=1.1e-05 Score=81.01 Aligned_cols=65 Identities=15% Similarity=0.172 Sum_probs=53.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEec-CHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTL-STERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R-~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++..| ++++++++.++++ .....+|++|.+++.+.
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~--~~~~~~D~~~~~~~~~~ 69 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG--ATAVQTDSADRDAVIDV 69 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC--CeEEecCCCCHHHHHHH
Confidence 56899999999999999999999999999988765 6677777777654 34567899998877544
No 156
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.09 E-value=8.7e-06 Score=83.06 Aligned_cols=69 Identities=13% Similarity=0.200 Sum_probs=53.3
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH--HHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE--RFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e--~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+...+|+++|||++||||+++|+.|+++|++|++++|+.. ..+++ ++.+.+.....+|++|.++++++
T Consensus 5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~ 75 (253)
T PRK08993 5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQV-TALGRRFLSLTADLRKIDGIPAL 75 (253)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHH-HhcCCeEEEEECCCCCHHHHHHH
Confidence 34567899999999999999999999999999998877532 22222 23344566778899999988665
No 157
>PRK07985 oxidoreductase; Provisional
Probab=98.09 E-value=1.1e-05 Score=84.66 Aligned_cols=67 Identities=21% Similarity=0.206 Sum_probs=53.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC--HHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS--TERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~--~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++.+|+ .++.+++.+.+ +.++....+|++|.++++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 118 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSL 118 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHH
Confidence 568999999999999999999999999999998764 34455554433 34556778899999888655
No 158
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.09 E-value=5.5e-06 Score=87.27 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=41.9
Q ss_pred CCCCcEEEEecC--CchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc
Q 006768 445 PKDVKEVFLTGA--TSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA 492 (632)
Q Consensus 445 ~~~gk~vlVtGa--sgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i 492 (632)
+..||+++|||| ++|||+++|+.|+++|++|++ +|+.+++++++.++
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~ 54 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSL 54 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhh
Confidence 468999999999 899999999999999999988 78888888777555
No 159
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.08 E-value=9.2e-06 Score=83.99 Aligned_cols=66 Identities=21% Similarity=0.244 Sum_probs=55.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+||+|+++|+.|+++|++|++++|+.++++++.+++. ..+....+|++|.++++.+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 72 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNF 72 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHH
Confidence 46889999999999999999999999999999999988877765532 2456678899999887543
No 160
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.08 E-value=9.9e-06 Score=83.56 Aligned_cols=64 Identities=23% Similarity=0.363 Sum_probs=53.2
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CC-ccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---ID-CQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~-~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .+ .....+|++|.++++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 68 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAF 68 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHH
Confidence 579999999999999999999999999999999988887776653 22 23467899999888654
No 161
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.08 E-value=1.4e-05 Score=80.57 Aligned_cols=66 Identities=26% Similarity=0.386 Sum_probs=56.9
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||+||+|+++++.|+++|++|++++|+.++++++.++.+ .....+|++|.++++++
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~ 71 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG--CEPLRLDVGDDAAIRAA 71 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CeEEEecCCCHHHHHHH
Confidence 4678999999999999999999999999999999999998888877654 34677899998877554
No 162
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.07 E-value=1.2e-05 Score=80.96 Aligned_cols=67 Identities=24% Similarity=0.396 Sum_probs=56.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||+|+++|++|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 74 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAA 74 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHH
Confidence 357899999999999999999999999999999999888777766553 3455677899999888654
No 163
>PRK12743 oxidoreductase; Provisional
Probab=98.07 E-value=1.2e-05 Score=82.14 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=53.5
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEe-cCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLT-LSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~-R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|+++. |+.++++++.+++ +.++....+|++|.++++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 70 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQA 70 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 68899999999999999999999999998875 4666676666554 34567788999999988654
No 164
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.06 E-value=1.2e-05 Score=81.75 Aligned_cols=65 Identities=25% Similarity=0.307 Sum_probs=54.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++++.|+++|++|++++|+.++++++.+.. ..++....+|++|.++++.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 69 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQA 69 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHH
Confidence 578999999999999999999999999999999988777665543 23466778899999888654
No 165
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.06 E-value=1e-05 Score=81.68 Aligned_cols=67 Identities=19% Similarity=0.255 Sum_probs=55.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+|++|+++++.|+++|++|++++|+.+++++..+++. .++....+|++|.++++++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~ 73 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAA 73 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 357899999999999999999999999999999999887776666543 2456677899999888654
No 166
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.06 E-value=1.2e-05 Score=82.89 Aligned_cols=64 Identities=30% Similarity=0.289 Sum_probs=54.6
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||||+++|+.|+++|.+|++++|+.++++++.+++. .+.....+|++|.++++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 67 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTAL 67 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 479999999999999999999999999999999998888776653 3556678899999887554
No 167
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.06 E-value=1.3e-05 Score=81.69 Aligned_cols=67 Identities=22% Similarity=0.256 Sum_probs=57.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-CccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+|++|+.+|+.|+++|++|++++|++++.+++.++... ++....+|++|.++++.+
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERV 76 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHH
Confidence 5789999999999999999999999999999999999888887776543 345677899999888654
No 168
>PRK06398 aldose dehydrogenase; Validated
Probab=98.05 E-value=6.8e-06 Score=84.21 Aligned_cols=59 Identities=17% Similarity=0.304 Sum_probs=50.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|+.++.. ++....+|++|.++++++
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~--------~~~~~~~D~~~~~~i~~~ 62 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN--------DVDYFKVDVSNKEQVIKG 62 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC--------ceEEEEccCCCHHHHHHH
Confidence 56899999999999999999999999999999999865421 355778999999888665
No 169
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.05 E-value=1.5e-05 Score=81.25 Aligned_cols=64 Identities=23% Similarity=0.277 Sum_probs=51.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|+++.|+ ++..+++.++ .+....+|++|.++++++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~---~~~~~~~Dl~~~~~~~~~ 69 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK---GVFTIKCDVGNRDQVKKS 69 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC---CCeEEEecCCCHHHHHHH
Confidence 568999999999999999999999999999887664 4444554432 356778999999988665
No 170
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.04 E-value=1.3e-05 Score=82.97 Aligned_cols=63 Identities=22% Similarity=0.285 Sum_probs=53.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++|||| ||||+++|+.|+ +|++|++++|+.++++++.+++. .++..+.+|++|.++++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~ 67 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKAL 67 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHH
Confidence 578999998 799999999997 89999999999988887776653 2456778999999988665
No 171
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.04 E-value=1.4e-05 Score=82.57 Aligned_cols=61 Identities=20% Similarity=0.195 Sum_probs=52.3
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||||+++|+.|+++|++|++++|+.++++++.++ ......+|++|.++++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~ 62 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA---GFTAVQLDVNDGAALARL 62 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC---CCeEEEeeCCCHHHHHHH
Confidence 7899999999999999999999999999999999888776542 345678899999888654
No 172
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.04 E-value=1.4e-05 Score=80.89 Aligned_cols=67 Identities=16% Similarity=0.116 Sum_probs=53.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++++.|+++|.+|++++|+. ++.+++.+++ +.++....+|++|.++++++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 74 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAAL 74 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4578999999999999999999999999999999975 4555555544 23456678899999988654
No 173
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.04 E-value=1.3e-05 Score=81.28 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=54.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~ 67 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSA 67 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 679999999999999999999999999999999888877766653 3456677899999988654
No 174
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.04 E-value=1.5e-05 Score=80.12 Aligned_cols=67 Identities=24% Similarity=0.310 Sum_probs=56.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+|++|+.+++.|+++|.+|++++|++++.+++.+++. .+.....+|++|.++++++
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRAL 72 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 356899999999999999999999999999999999988777766543 3556677899999887554
No 175
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.04 E-value=1.4e-05 Score=81.10 Aligned_cols=65 Identities=28% Similarity=0.236 Sum_probs=55.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+|++|+++|+.|+++|.+|++++|+.++.+++.+++ +.++....+|++|.++++++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 68 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADM 68 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 478999999999999999999999999999999998888777664 23456677899999877554
No 176
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.04 E-value=1.6e-05 Score=82.14 Aligned_cols=68 Identities=21% Similarity=0.261 Sum_probs=54.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH-------HHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTER-------FQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~-------l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+..+|+++||||+||||+++|+.|+++|++|++++|+.+. ++++++++ +.++..+.+|++|.+++++.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 80 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA 80 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 3568999999999999999999999999999999997542 44444443 33566778999999988654
No 177
>PRK08264 short chain dehydrogenase; Validated
Probab=98.04 E-value=1.5e-05 Score=80.16 Aligned_cols=63 Identities=21% Similarity=0.191 Sum_probs=53.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+|++|+++|+.|+++|+ +|++++|+.+++++ ...++....+|++|.+++++.
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~ 67 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAA 67 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHH
Confidence 4678999999999999999999999999 99999999887664 334566778899999887654
No 178
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.03 E-value=1.3e-05 Score=93.25 Aligned_cols=67 Identities=25% Similarity=0.357 Sum_probs=58.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|++++++++.+++. .++..+.+|++|.++++++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 438 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHT 438 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 568999999999999999999999999999999999999888877652 3566778999999988654
No 179
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.03 E-value=1.4e-05 Score=80.96 Aligned_cols=67 Identities=24% Similarity=0.273 Sum_probs=52.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH--HHHHHHHcC----CCccEEEEeCCC-HHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTER--FQKIQKEAP----IDCQNYLVQVTK-YQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~--l~~l~~~i~----~~~~~~~~Dvsd-~~~~~~~ 512 (632)
..+|+++||||++|||+++|+.|+++|++|+++.|+.++ .+++.+... .......+|+++ .++++..
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~ 76 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEAL 76 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHH
Confidence 568999999999999999999999999998888877553 455544444 345566789998 8888654
No 180
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.03 E-value=1.3e-05 Score=80.72 Aligned_cols=67 Identities=24% Similarity=0.293 Sum_probs=56.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEE-ecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLML-TLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~-~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+|+||+++|+.|+++|++|+++ +|+.++.+++.+++. .++....+|++|.++++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENL 73 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 567899999999999999999999999999998 999888777766643 2456677899999988654
No 181
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.03 E-value=1.5e-05 Score=82.33 Aligned_cols=67 Identities=18% Similarity=0.250 Sum_probs=56.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++..+.+|++|.++++++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 77 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSF 77 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 456899999999999999999999999999999999888777665542 3455667899999988654
No 182
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.02 E-value=1.1e-05 Score=83.06 Aligned_cols=61 Identities=30% Similarity=0.305 Sum_probs=51.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+||||+++|+.|+++|++|++++|+.++.+.. ..+..+.+|++|.++++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~D~~d~~~~~~~ 63 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-----PGVELLELDVTDDASVQAA 63 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-----CCCeeEEeecCCHHHHHHH
Confidence 357899999999999999999999999999999997765431 2456788999999988655
No 183
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.02 E-value=1.9e-05 Score=80.64 Aligned_cols=67 Identities=19% Similarity=0.224 Sum_probs=53.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEec-CHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTL-STERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R-~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|+++.| +.++++++.+++ +.++....+|++|.++++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 77 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRAL 77 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 46789999999999999999999999999987665 556666666554 34566678899999888655
No 184
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.02 E-value=1.4e-05 Score=89.85 Aligned_cols=67 Identities=21% Similarity=0.178 Sum_probs=56.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC------------CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP------------IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~------------~~~~~~~~Dvsd~~~~~~~ 512 (632)
++||+++||||+||||++++++|+++|++|++++|+.++++++.+++. .++..+.+|++|.++++++
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 468999999999999999999999999999999999999887765432 1355678899998887543
No 185
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.01 E-value=1.7e-05 Score=81.14 Aligned_cols=66 Identities=23% Similarity=0.378 Sum_probs=52.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.+ .++..+++ +.++....+|++|.++++++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 72 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAA 72 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHH
Confidence 46799999999999999999999999999999999875 33333332 23455678899999888665
No 186
>PRK05855 short chain dehydrogenase; Validated
Probab=98.01 E-value=1.4e-05 Score=90.97 Aligned_cols=67 Identities=24% Similarity=0.256 Sum_probs=58.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++++++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .++....+|++|.++++++
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 382 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAF 382 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 456899999999999999999999999999999999999888877653 3566778999999988655
No 187
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.01 E-value=1.3e-05 Score=81.75 Aligned_cols=62 Identities=19% Similarity=0.195 Sum_probs=51.9
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||+||||+++|+.|+++|++|++++|++++ ....++....+|++|.+++++.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~D~~~~~~~~~~ 67 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD------DLPEGVEFVAADLTTAEGCAAV 67 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh------hcCCceeEEecCCCCHHHHHHH
Confidence 3568999999999999999999999999999999998653 2234456788999999988654
No 188
>PRK06128 oxidoreductase; Provisional
Probab=98.01 E-value=1.6e-05 Score=83.41 Aligned_cols=67 Identities=15% Similarity=0.179 Sum_probs=53.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH--HHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST--ERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~--e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++..|+. ++.+++.+++ +.++..+.+|++|.++++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 124 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQL 124 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence 5689999999999999999999999999999887753 2344444443 33556778899999988665
No 189
>PLN00015 protochlorophyllide reductase
Probab=98.00 E-value=1.3e-05 Score=84.52 Aligned_cols=61 Identities=21% Similarity=0.235 Sum_probs=53.2
Q ss_pred EEecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHHHHHHHcCC---CccEEEEeCCCHHHHHHH
Q 006768 452 FLTGATSKLGRAIALYLCRKR-VRVLMLTLSTERFQKIQKEAPI---DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 452 lVtGasgGIG~aiA~~La~~G-~~V~l~~R~~e~l~~l~~~i~~---~~~~~~~Dvsd~~~~~~~ 512 (632)
+||||++|||+++|+.|+++| ++|++++|+.+++++++++++. ++....+|++|.++++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~ 65 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQF 65 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHH
Confidence 589999999999999999999 9999999999999888887742 455678899999998665
No 190
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.99 E-value=2.2e-05 Score=79.17 Aligned_cols=60 Identities=15% Similarity=0.227 Sum_probs=51.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC----CCccEEEEeCCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP----IDCQNYLVQVTK 505 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~----~~~~~~~~Dvsd 505 (632)
.++|+++||||+||+|+++|+.|+++|.+|++++|++++++++.+++. .+.....+|+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~ 67 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMS 67 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecc
Confidence 567999999999999999999999999999999999998888877652 234566789875
No 191
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.99 E-value=2.1e-05 Score=80.45 Aligned_cols=65 Identities=23% Similarity=0.333 Sum_probs=54.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++++||||+||+|+++|+.|+++|++|++++|+.++.+++.+++ +.+.....+|++|.++++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~ 68 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERL 68 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 468999999999999999999999999999999988877776654 33456678899999888654
No 192
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.99 E-value=1.4e-05 Score=80.02 Aligned_cols=62 Identities=13% Similarity=0.160 Sum_probs=51.9
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||+|+++|+.|+++|++|++++|+.++.+++.+ .. +.....+|++|.++++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~D~~d~~~~~~~ 63 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-LP-GVHIEKLDMNDPASLDQL 63 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-cc-ccceEEcCCCCHHHHHHH
Confidence 689999999999999999999999999999999877665533 32 355677899999888665
No 193
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.98 E-value=1.6e-05 Score=79.55 Aligned_cols=61 Identities=18% Similarity=0.253 Sum_probs=53.0
Q ss_pred EEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC--CCccEEEEeCCCHHHHHHH
Q 006768 452 FLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP--IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 452 lVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~--~~~~~~~~Dvsd~~~~~~~ 512 (632)
+||||+||+|+++|+.|+++|++|++++|+.++++++.++++ .++..+.+|++|.++++++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 63 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAF 63 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 589999999999999999999999999999988888777663 3456778899999988665
No 194
>PRK08017 oxidoreductase; Provisional
Probab=97.97 E-value=2.2e-05 Score=79.85 Aligned_cols=61 Identities=23% Similarity=0.364 Sum_probs=52.1
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||||+++|+.|+++|++|++++|+.++++.+.+ . .+....+|++|.++++++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~--~~~~~~~D~~~~~~~~~~ 63 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-L--GFTGILLDLDDPESVERA 63 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-C--CCeEEEeecCCHHHHHHH
Confidence 689999999999999999999999999999999988877643 2 255778899998887554
No 195
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.97 E-value=2.2e-05 Score=79.37 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=51.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEE-ecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLML-TLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~-~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+||||+++|+.|+++|++|++. +|+.++.++..+++ ..++....+|++|.++++++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAA 71 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence 47899999999999999999999999998874 45555555554443 23455667899999988655
No 196
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.97 E-value=2.3e-05 Score=79.99 Aligned_cols=67 Identities=18% Similarity=0.187 Sum_probs=55.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVR-VLMLTLSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~-V~l~~R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+.+|+.|+++|++ |++++|+.++.+++.+++ +.++....+|++|.+++++.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 74 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRV 74 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 46799999999999999999999999998 999999988777665554 33455677899999888654
No 197
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.96 E-value=2e-05 Score=80.42 Aligned_cols=63 Identities=21% Similarity=0.157 Sum_probs=49.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHHHcCCCccEEEEeCCCHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQKEAPIDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~ 511 (632)
.++|+++||||+||||+++|++|+++|++|++++|++ ++.+.. .........+|++|.+++++
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~ 75 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN---DESPNEWIKWECGKEESLDK 75 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh---ccCCCeEEEeeCCCHHHHHH
Confidence 4689999999999999999999999999999999986 332221 11122456789999988754
No 198
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.96 E-value=1.9e-05 Score=82.21 Aligned_cols=119 Identities=15% Similarity=0.144 Sum_probs=80.1
Q ss_pred CceeecccccccccccCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCch-HHHHHHHHHHHcCCcE
Q 006768 397 VKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSK-LGRAIALYLCRKRVRV 475 (632)
Q Consensus 397 ~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgG-IG~aiA~~La~~G~~V 475 (632)
....-+|++|+ +| +|.++..+ ..-..-|| .++...+...+++.+||+|+|.|+ || +|+++|..|.++|++|
T Consensus 115 ~~aKDVdg~n~---~n-~G~l~~~~--~~~~p~T~-~gii~~L~~~~i~l~Gk~vvViG~-gg~vGkpia~~L~~~gatV 186 (283)
T PRK14192 115 SLAKDVDGVTC---LG-FGRMAMGE--AAYGSATP-AGIMRLLKAYNIELAGKHAVVVGR-SAILGKPMAMMLLNANATV 186 (283)
T ss_pred CHHHhcCCCCc---cc-cCccccCC--CcccCCcH-HHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCEE
Confidence 33445678888 66 67754333 23344589 999998888888999999999999 56 9999999999999999
Q ss_pred EEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcCCccCccccccCCCCcEEEeec-cCC
Q 006768 476 LMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVGKWITPREQNWAPPGTHFHQFV-VPP 542 (632)
Q Consensus 476 ~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g~~~~~~d~~~~~~G~vv~d~~-~P~ 542 (632)
+++.|..+.+. +.+.. +... + ..+|. ..+.+...+++|++++|+. .|.
T Consensus 187 tv~~~~t~~L~---~~~~~-aDIv-I-------------~AtG~-~~~v~~~~lk~gavViDvg~n~~ 235 (283)
T PRK14192 187 TICHSRTQNLP---ELVKQ-ADII-V-------------GAVGK-PELIKKDWIKQGAVVVDAGFHPR 235 (283)
T ss_pred EEEeCCchhHH---HHhcc-CCEE-E-------------EccCC-CCcCCHHHcCCCCEEEEEEEeec
Confidence 99988544333 33321 1111 1 11121 1122334489999999998 774
No 199
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.95 E-value=2e-05 Score=81.02 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=49.8
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEec-CHHHHHHHHHHcC----CCccEEEEeCCCHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTL-STERFQKIQKEAP----IDCQNYLVQVTKYQAA 509 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R-~~e~l~~l~~~i~----~~~~~~~~Dvsd~~~~ 509 (632)
++++||||+||||+++|+.|+++|++|++++| +.++++++.++++ .+...+.+|++|.+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~ 67 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATL 67 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhh
Confidence 57999999999999999999999999998765 5677777766653 2344577899998765
No 200
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.95 E-value=2.6e-05 Score=81.49 Aligned_cols=68 Identities=16% Similarity=0.290 Sum_probs=53.9
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH-HHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE-RFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e-~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+++||||+||||+++|+.|+++|++|++++|+.+ ..+++.+++ +.++..+.+|++|.+++++.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 114 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDA 114 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 356899999999999999999999999999999998753 344444444 23455678899999888554
No 201
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.94 E-value=2.9e-05 Score=79.26 Aligned_cols=67 Identities=16% Similarity=0.204 Sum_probs=51.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEec----CHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTL----STERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R----~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|+++++ +.++++++.+++ +.++....+|++|.++++++
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 79 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKL 79 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHH
Confidence 46799999999999999999999999999666654 334555555544 23556678899999988655
No 202
>PRK09135 pteridine reductase; Provisional
Probab=97.94 E-value=2.9e-05 Score=78.28 Aligned_cols=67 Identities=18% Similarity=0.166 Sum_probs=53.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHcC----CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEAP----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i~----~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+++++||||+|+||+.+++.|+++|++|++++|+ .++.+++.+++. .......+|++|.++++.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 75 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPEL 75 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHH
Confidence 456899999999999999999999999999999985 455666554432 2455677899999888654
No 203
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.93 E-value=2.1e-05 Score=91.77 Aligned_cols=67 Identities=22% Similarity=0.267 Sum_probs=57.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.++++++.+++. .+.....+|++|.++++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a 483 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAA 483 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHH
Confidence 468999999999999999999999999999999999988887776653 1345677899999988655
No 204
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.92 E-value=3.2e-05 Score=78.31 Aligned_cols=65 Identities=17% Similarity=0.094 Sum_probs=53.0
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEE-ecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLML-TLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~-~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.|+++||||+||||+++|+.|+++|++|+++ .|++++++++.+++. .++..+.+|++|.++++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 70 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAM 70 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHH
Confidence 4789999999999999999999999998775 567777777666543 3566788999999888654
No 205
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.91 E-value=4e-05 Score=77.27 Aligned_cols=67 Identities=19% Similarity=0.119 Sum_probs=53.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|+++.|+ .++.+++.+++ ..++....+|++|.++++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 73 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRL 73 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 568999999999999999999999999999887765 44455554443 34566778899999888655
No 206
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.91 E-value=3.7e-05 Score=77.72 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=51.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEe-cCHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLT-LSTERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~-R~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+||||+++|+.|+++|++|+++. |++++.+++.+++ +.+...+.+|++|.++++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~ 70 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRL 70 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHH
Confidence 57899999999999999999999999988876 5566666665554 23455778999999888655
No 207
>PRK08324 short chain dehydrogenase; Validated
Probab=97.91 E-value=3e-05 Score=90.73 Aligned_cols=67 Identities=24% Similarity=0.201 Sum_probs=59.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~~~~Dvsd~~~~~~~ 512 (632)
..||+++||||+||||+++|+.|+++|++|++++|+.++++++.+++.. .+....+|++|.++++++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~ 488 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAA 488 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHH
Confidence 4689999999999999999999999999999999999999888887754 566778899999888654
No 208
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.89 E-value=4.1e-05 Score=78.27 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=51.8
Q ss_pred CCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecC-----------HHHHHHHHHHc---CCCccEEEEeCCCHHHH
Q 006768 446 KDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLS-----------TERFQKIQKEA---PIDCQNYLVQVTKYQAA 509 (632)
Q Consensus 446 ~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~-----------~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~ 509 (632)
.++|+++||||+ +|||+++|+.|+++|++|++++|+ .++.+++.+++ +.++..+.+|++|.+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 578999999998 499999999999999999887542 33344444444 33566778999999988
Q ss_pred HHH
Q 006768 510 QHS 512 (632)
Q Consensus 510 ~~~ 512 (632)
+++
T Consensus 84 ~~~ 86 (256)
T PRK12859 84 KEL 86 (256)
T ss_pred HHH
Confidence 665
No 209
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.89 E-value=3.5e-05 Score=76.89 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=52.2
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||||+++|+.|+++|++|++++|+.++.+++... ......+|++|.++++++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~ 62 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL---GAEALALDVADPASVAGL 62 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhc---cceEEEecCCCHHHHHHH
Confidence 6799999999999999999999999999999998888776542 244678899999888664
No 210
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.88 E-value=2.2e-05 Score=80.55 Aligned_cols=62 Identities=21% Similarity=0.182 Sum_probs=51.6
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..++|+++||||+||||+++|+.|+++|++|++++|+.++.+. .+.....+|++|.++++++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~ 67 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH------ENYQFVPTDVSSAEEVNHT 67 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc------CceEEEEccCCCHHHHHHH
Confidence 3578999999999999999999999999999999998765431 2455678899999988655
No 211
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.88 E-value=4.2e-05 Score=77.52 Aligned_cols=67 Identities=21% Similarity=0.264 Sum_probs=54.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC----CccEEEEeCC--CHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI----DCQNYLVQVT--KYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~----~~~~~~~Dvs--d~~~~~~~ 512 (632)
.++|+++|||++|+||.++|+.|+++|++|++++|+.++++++.+++.. +.....+|++ +.+++++.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~ 82 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL 82 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHH
Confidence 5789999999999999999999999999999999999888777666532 3445667775 66666444
No 212
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.88 E-value=4.3e-05 Score=77.67 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=51.6
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.|+++||||+||||+++|+.|+++|++|++++|+. ++.++..+++ ..+.....+|++|.++++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 70 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAM 70 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 37899999999999999999999999999999864 4444444443 23466778999999887654
No 213
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.88 E-value=3.7e-05 Score=77.53 Aligned_cols=64 Identities=16% Similarity=0.160 Sum_probs=52.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEE-EecCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLM-LTLSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l-~~R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+|+||+++++.|+++|++|++ ..|+.++.++..+++. .++....+|++|.++++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~ 69 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAM 69 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHH
Confidence 68999999999999999999999999876 4688877776666542 3456678999999988665
No 214
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.87 E-value=3e-05 Score=78.41 Aligned_cols=62 Identities=21% Similarity=0.168 Sum_probs=49.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++++||||+||||+++|+.|+++|++|++++|+.++. +.+..+.++....+|++|.++++++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~ 63 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAAAAGERLAEVELDLSDAAAAAAW 63 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhhccCCeEEEEEeccCCHHHHHHH
Confidence 4699999999999999999999999999999986542 2233344566778999999888663
No 215
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.87 E-value=3.9e-05 Score=77.07 Aligned_cols=64 Identities=20% Similarity=0.262 Sum_probs=52.3
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEec-CHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTL-STERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R-~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||+|+++|+.|+++|++|+++.| +.++.+++.+++ ..++....+|++|.++++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 68 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAA 68 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHH
Confidence 68999999999999999999999999998887 666666655543 23566788899999887554
No 216
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.87 E-value=4.2e-05 Score=78.03 Aligned_cols=68 Identities=19% Similarity=0.319 Sum_probs=52.1
Q ss_pred CCCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecC-----------HHHHHHHHHHc---CCCccEEEEeCCCHHH
Q 006768 445 PKDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLS-----------TERFQKIQKEA---PIDCQNYLVQVTKYQA 508 (632)
Q Consensus 445 ~~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~-----------~e~l~~l~~~i---~~~~~~~~~Dvsd~~~ 508 (632)
+..+|+++||||+ ||||+++|+.|+++|++|++++|+ .+...++.+++ +.++..+.+|++|.++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 4568999999998 499999999999999999999987 22222233333 3456677889999988
Q ss_pred HHHH
Q 006768 509 AQHS 512 (632)
Q Consensus 509 ~~~~ 512 (632)
++++
T Consensus 82 ~~~~ 85 (256)
T PRK12748 82 PNRV 85 (256)
T ss_pred HHHH
Confidence 8554
No 217
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.85 E-value=4.1e-05 Score=77.45 Aligned_cols=67 Identities=22% Similarity=0.279 Sum_probs=53.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEe-cCHHHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLT-LSTERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~-R~~e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++.. |++++.+++.+++. .++....+|++|.++++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 74 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRL 74 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 4579999999999999999999999999988754 45666666665543 3466678899999888655
No 218
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.83 E-value=4.6e-05 Score=78.60 Aligned_cols=66 Identities=24% Similarity=0.345 Sum_probs=57.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-----CccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-----~~~~~~~Dvsd~~~~~~~ 512 (632)
..+.++|||+|+|+|+++|..+.++|++|.+++|+.+++++++++++- .+....+|+.|++++...
T Consensus 32 ~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~ 102 (331)
T KOG1210|consen 32 PRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKV 102 (331)
T ss_pred ccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHH
Confidence 347899999999999999999999999999999999999999999753 244667899999988544
No 219
>PRK07069 short chain dehydrogenase; Validated
Probab=97.83 E-value=4.4e-05 Score=77.23 Aligned_cols=62 Identities=24% Similarity=0.302 Sum_probs=51.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHcCC-----CccEEEEeCCCHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEAPI-----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i~~-----~~~~~~~Dvsd~~~~~~~ 512 (632)
++||||+||||+++|+.|+++|++|++++|+ .++++++.+++.. ......+|++|.++++++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 69 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQAL 69 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHH
Confidence 7999999999999999999999999999998 7777777766532 123467899999988654
No 220
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.82 E-value=5.6e-05 Score=76.21 Aligned_cols=67 Identities=22% Similarity=0.359 Sum_probs=53.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEec----CHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTL----STERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R----~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+||||+++|+.|+++|++|++++| +.++.+++.+++ +.+.....+|++|.++++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 35789999999999999999999999999988654 455666665554 23556778899999888654
No 221
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.81 E-value=7.4e-05 Score=75.08 Aligned_cols=67 Identities=22% Similarity=0.227 Sum_probs=52.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH-HHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE-RFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e-~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++|+++||||+|++|+++++.|+++|++|+++.|+.+ +.+++.+++ ..+...+.+|++|.++++++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 73 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERA 73 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 46789999999999999999999999999988877654 455554443 23455667899999888654
No 222
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=97.80 E-value=5.7e-05 Score=72.83 Aligned_cols=133 Identities=25% Similarity=0.303 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCc---hhhH------hhcccCCCCCCCChhhhHHhhHHHHHHHHHHHHH------
Q 006768 124 IALQILHVAVSEPLYYVLHRH-FHRNK---YLFI------HYHSLHHSSPVPQIPTAGHATLLEHIVLSAIVAI------ 187 (632)
Q Consensus 124 ~~~~~~~~~~~d~~~Yw~HR~-~H~~~---~ly~------~~H~~HH~~~~~~~~~~~~~hp~E~~~~~~~~~i------ 187 (632)
...+++.++.+.+..|-+||+ +|- + .-|+ -+|.-||..+.- -....+.|.-..+....+..
T Consensus 84 ~~~f~~Gvf~WTl~EY~lHRflFH~-k~~~~s~~~~t~Hfl~HGcHHk~P~D--~~RLVfPP~~~~il~~pfy~~~~~vl 160 (240)
T KOG0539|consen 84 SGLFVIGVFTWTLIEYTLHRFLFHI-KPNPDSYWLITLHFLIHGCHHKLPMD--GYRLVFPPTPFAILAAPFYLILSLVL 160 (240)
T ss_pred hHHHHHHHHHHHHHHHHHHheEEEe-cCCCCchHHHHHHHHHhcccccCCCC--CceEecCCchHHHHHHHHHHHHHHhc
Confidence 445667788899999999995 553 3 1122 469999986531 12223333333333332211
Q ss_pred HH-HHHhhccchhHHHHHHHHHHHHHHhhhcccceeeccccccccccchhhhccCcccccccccC-CCCCcccCchhhhh
Q 006768 188 PI-LGSSIIGYGSISLIYGYILMFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHTE-KDSNFCLFMPLFDA 265 (632)
Q Consensus 188 p~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l~~tp~~H~lHH~~-~~~Nyg~~~~~wD~ 265 (632)
|- .++..++ ..+++|+.|-...-.+.|.+-. .. |.++. --.+|.-||-+ .+.-||....+||+
T Consensus 161 ~~~~~~a~fa----G~l~GYV~YDmtHYyLHhg~p~---~~-----~~~~~---lK~yHl~HHfk~q~~GfGItS~lWD~ 225 (240)
T KOG0539|consen 161 PHPVAPAGFA----GGLLGYVCYDMTHYYLHHGSPP---KR-----PYLKH---LKKYHLNHHFKHQDLGFGITSSLWDY 225 (240)
T ss_pred Ccchhhhhhc----cchhhhhhhhhhhhhhhcCCCC---Cc-----hHHHH---HHHHHhhhhhhccccCccccHHHHHH
Confidence 11 1122221 2456788887777777787632 11 12221 35588888886 69999999999999
Q ss_pred hcCCCCCCC
Q 006768 266 LGNTLNSKS 274 (632)
Q Consensus 266 lfGT~~~~~ 274 (632)
+|||.-...
T Consensus 226 VFgTl~~~~ 234 (240)
T KOG0539|consen 226 VFGTLGPLK 234 (240)
T ss_pred HhccCCCCc
Confidence 999997653
No 223
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=97.80 E-value=5.3e-05 Score=76.25 Aligned_cols=62 Identities=21% Similarity=0.208 Sum_probs=50.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++||||+||||+++|+.|+++|++|++++|+ .++.+++.+++ +.++....+|++|.++++.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~ 66 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTL 66 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHH
Confidence 5899999999999999999999999888764 56666666554 34566788999999988654
No 224
>PLN02583 cinnamoyl-CoA reductase
Probab=97.79 E-value=8.3e-05 Score=78.00 Aligned_cols=68 Identities=13% Similarity=0.105 Sum_probs=51.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH--HHHHHHHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST--ERFQKIQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~--e~l~~l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+|+||||+|+||+++++.|+++|.+|+++.|+. ++.++...++. .++....+|++|.+++.++
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~ 75 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA 75 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH
Confidence 34678999999999999999999999999999999853 33333334432 2455677899998877543
No 225
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.77 E-value=8.1e-05 Score=74.01 Aligned_cols=63 Identities=25% Similarity=0.353 Sum_probs=53.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+++||||+|++|+++++.|+++ .+|++++|+.++.+++.++.+ +.....+|++|.++++++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~ 65 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELP-GATPFPVDLTDPEAIAAA 65 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhc-cceEEecCCCCHHHHHHH
Confidence 478999999999999999999999 999999999888877765543 456778899999888654
No 226
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.77 E-value=7.6e-05 Score=75.63 Aligned_cols=62 Identities=19% Similarity=0.282 Sum_probs=51.5
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
...+|+++||||+||||+++|+.|+++|++|++++|+. ....+.+...+.+|++|.+++++.
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~ 66 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQEDYPFATFVLDVSDAAAVAQV 66 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhcCCceEEEEecCCCHHHHHHH
Confidence 36789999999999999999999999999999999986 122234566788999999888654
No 227
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.75 E-value=9.8e-05 Score=82.07 Aligned_cols=66 Identities=24% Similarity=0.296 Sum_probs=55.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC--HHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS--TERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~--~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+.++|+++||||+||||+++|+.|+++|++|++++|+ .++++++.++++. ....+|++|.++++++
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~--~~~~~Dv~~~~~~~~~ 274 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGG--TALALDITAPDAPARI 274 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCC--eEEEEeCCCHHHHHHH
Confidence 3578999999999999999999999999999999884 5667777777653 3678899999888655
No 228
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.72 E-value=0.0001 Score=78.36 Aligned_cols=66 Identities=15% Similarity=0.273 Sum_probs=53.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcC--CcEEEEecCHHHHHHHHHHcC-CCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKR--VRVLMLTLSTERFQKIQKEAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G--~~V~l~~R~~e~l~~l~~~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|+++||||+|+||+++++.|+++| .+|++++|+..+.+++.+++. ..+..+.+|++|.+++.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~ 71 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRA 71 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHH
Confidence 57899999999999999999999987 689999998776666655553 2456678899999887544
No 229
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.69 E-value=0.00012 Score=73.75 Aligned_cols=64 Identities=23% Similarity=0.193 Sum_probs=50.3
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH-HHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE-RFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e-~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++|||++||+|+++|+.|+++|++|++++|+.+ ..+++.++. +.++....+|++|.++++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 70 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEA 70 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence 68999999999999999999999999999999843 333333332 23456778899999888654
No 230
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.68 E-value=0.00014 Score=78.17 Aligned_cols=66 Identities=23% Similarity=0.218 Sum_probs=50.3
Q ss_pred CCCcEEEEecCCchHHHH--HHHHHHHcCCcEEEEecCHH---------------HHHHHHHHcCCCccEEEEeCCCHHH
Q 006768 446 KDVKEVFLTGATSKLGRA--IALYLCRKRVRVLMLTLSTE---------------RFQKIQKEAPIDCQNYLVQVTKYQA 508 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~a--iA~~La~~G~~V~l~~R~~e---------------~l~~l~~~i~~~~~~~~~Dvsd~~~ 508 (632)
.++|+++|||+++|+|.| +|++| ++|++++++++..+ .+++..++.+..+....+|+++.++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 568999999999999999 89999 99999888874321 2344444444455667889999988
Q ss_pred HHHH
Q 006768 509 AQHS 512 (632)
Q Consensus 509 ~~~~ 512 (632)
+++.
T Consensus 118 v~~l 121 (398)
T PRK13656 118 KQKV 121 (398)
T ss_pred HHHH
Confidence 8554
No 231
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00019 Score=69.71 Aligned_cols=62 Identities=15% Similarity=0.326 Sum_probs=51.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC--CCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP--IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~--~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||+ |+|.++++.|+++|++|++++|++++++++..+++ .++....+|++|.++++++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~ 65 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLA 65 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHH
Confidence 58999997 78888999999999999999999998888776553 3455667899999998665
No 232
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.64 E-value=0.00016 Score=72.55 Aligned_cols=66 Identities=29% Similarity=0.286 Sum_probs=50.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+|++|++++..|+++|.+|++..|+ .+..+.+.+++ ..++..+.+|++|.++++++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 74 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAA 74 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHH
Confidence 45799999999999999999999999998776554 44444444433 34566778899999988655
No 233
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.63 E-value=0.0001 Score=77.94 Aligned_cols=66 Identities=12% Similarity=0.029 Sum_probs=50.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc-----CCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA-----PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i-----~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+|+||+++++.|+++|++|+++.|+.++.++..... ..++....+|++|.++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 74 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELA 74 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHH
Confidence 5799999999999999999999999999998888876554432221 12455667899988877543
No 234
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.62 E-value=0.00016 Score=79.29 Aligned_cols=155 Identities=15% Similarity=0.162 Sum_probs=92.4
Q ss_pred hhHhHHHHHHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCc-hhh-HHH--HHhhC-CCCCcEEE
Q 006768 378 QTGINKQIEDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGN-TCT-AAV--ILNEL-PKDVKEVF 452 (632)
Q Consensus 378 ~~~i~~~i~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~-slt-aa~--~~~~i-~~~gk~vl 452 (632)
.+-|-.+|.+|...|.+.|..-.-|.-+=+ ..+. +.|.=+....+..|. |.. +|+ +.+.+ ...+|+++
T Consensus 113 E~QIlgQVK~A~~~A~~~g~~g~~L~~lf~-~A~~------~aKrVrteT~I~~~~vSv~~~Av~la~~~~~~l~~kkvl 185 (414)
T PRK13940 113 EPQILGQVKDSYTLSKKNHAIGKELDRVFQ-KVFA------TAKRVRSETRIGHCPVSVAFSAITLAKRQLDNISSKNVL 185 (414)
T ss_pred cHHHHHHHHHHHHHHHHcCCchHHHHHHHH-HHHH------HHHHHHhccCCCCCCcCHHHHHHHHHHHHhcCccCCEEE
Confidence 346778889999999999987666654433 0111 111000111222222 222 222 22233 36789999
Q ss_pred EecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccEEEEeCCCH-HHHHHHHhhhc----CC-ccCccc
Q 006768 453 LTGATSKLGRAIALYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKY-QAAQHSKTWIV----GK-WITPRE 525 (632)
Q Consensus 453 VtGasgGIG~aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~-~~~~~~di~~~----g~-~~~~~d 525 (632)
|.|+ ||+|+++|..|+..|+ +|++++|+.+++++++++++. . ...+.++. +.+.++|+-+. .. .++.+.
T Consensus 186 viGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-~--~~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~ 261 (414)
T PRK13940 186 IIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-A--SAHYLSELPQLIKKADIIIAAVNVLEYIVTCKY 261 (414)
T ss_pred EEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-C--eEecHHHHHHHhccCCEEEECcCCCCeeECHHH
Confidence 9999 9999999999999995 799999999999999998752 1 12233332 22344554111 11 122221
Q ss_pred cccCCCCcEEEeeccCCccc
Q 006768 526 QNWAPPGTHFHQFVVPPILH 545 (632)
Q Consensus 526 ~~~~~~G~vv~d~~~P~~~~ 545 (632)
. -.+..+++|+++|++.+
T Consensus 262 -~-~~~~~~~iDLavPRdid 279 (414)
T PRK13940 262 -V-GDKPRVFIDISIPQALD 279 (414)
T ss_pred -h-CCCCeEEEEeCCCCCCC
Confidence 1 12456889999999944
No 235
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.62 E-value=0.00012 Score=72.34 Aligned_cols=68 Identities=24% Similarity=0.257 Sum_probs=52.3
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH---HcC-CCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK---EAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~---~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
...||.|++||+.||||++++++|.++|+.+.++.-+.|..++.++ ..+ ..+.+.++||++..+++++
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~ 73 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAA 73 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHH
Confidence 3569999999999999999999999999987777666665544432 222 2567789999998887554
No 236
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.61 E-value=0.00015 Score=77.98 Aligned_cols=70 Identities=10% Similarity=0.046 Sum_probs=55.9
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC--CCccEEEEeCCCHHHHHHH
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP--IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~--~~~~~~~~Dvsd~~~~~~~ 512 (632)
+-..++++|+||||+|.||+.++++|+++|.+|++++|+.++.+.+.+++. ..+....+|++|.+++.++
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEA 76 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHH
Confidence 344678899999999999999999999999999999998877666655542 2455677899998877544
No 237
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.61 E-value=0.00022 Score=72.10 Aligned_cols=67 Identities=22% Similarity=0.243 Sum_probs=50.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEec-CHHHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTL-STERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R-~~e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+|+||+++|++|+++|++|++..| +.++.++..+.+ +.+.....+|+++.++++++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 74 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETL 74 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHH
Confidence 45789999999999999999999999999887765 344444433332 33455678899999887554
No 238
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00015 Score=72.60 Aligned_cols=58 Identities=21% Similarity=0.330 Sum_probs=48.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+||+|+++|+.|+++|++|++++|+.++ ... .....+|++|.++++++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~~--~~~~~~D~~~~~~~~~~ 59 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DFP--GELFACDLADIEQTAAT 59 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------ccC--ceEEEeeCCCHHHHHHH
Confidence 46889999999999999999999999999999998654 111 23567899999888654
No 239
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.58 E-value=0.00034 Score=75.92 Aligned_cols=102 Identities=16% Similarity=0.133 Sum_probs=68.7
Q ss_pred HHhhCC-CCCcEEEEecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH-HHHHHh--
Q 006768 440 ILNELP-KDVKEVFLTGATSKLGRAIALYLCRKR-VRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA-AQHSKT-- 514 (632)
Q Consensus 440 ~~~~i~-~~gk~vlVtGasgGIG~aiA~~La~~G-~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~-~~~~di-- 514 (632)
+..... +.+|+++|.|| |-+|.-+|+.|+++| .+|++++|+.+++++++++++.+ .+.+.+..+ ...+|+
T Consensus 169 A~~~~~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~----~~~l~el~~~l~~~DvVi 243 (414)
T COG0373 169 AKRIFGSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE----AVALEELLEALAEADVVI 243 (414)
T ss_pred HHHHhcccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe----eecHHHHHHhhhhCCEEE
Confidence 334444 68999999999 889999999999999 48999999999999999998732 223333222 244454
Q ss_pred hhcC---CccCccc---cccCCCCcEEEeeccCCcccc
Q 006768 515 WIVG---KWITPRE---QNWAPPGTHFHQFVVPPILHF 546 (632)
Q Consensus 515 ~~~g---~~~~~~d---~~~~~~G~vv~d~~~P~~~~~ 546 (632)
+..+ ..++..+ ....++..+++|+++|++.+.
T Consensus 244 ssTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdie~ 281 (414)
T COG0373 244 SSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDVEP 281 (414)
T ss_pred EecCCCccccCHHHHHHHHhcccCeEEEEecCCCCCCc
Confidence 1111 1122221 222334468899999999433
No 240
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.54 E-value=0.00018 Score=77.12 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=50.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc--CCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA--PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i--~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+++||||+|+||+++|+.|+++|.+|++++|+.+...+..+.+ ..++....+|++|.++++++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 70 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKA 70 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHH
Confidence 4789999999999999999999999999999998866544333222 22455677899998877543
No 241
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.53 E-value=0.00025 Score=74.21 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=62.3
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH-HHHHHhhhcC---
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA-AQHSKTWIVG--- 518 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~-~~~~di~~~g--- 518 (632)
.+...||+++|+|+ |++|+++|+.|...|++|.+++|+.++.++..+ .+. ..++..+.++ ++++|+-+..
T Consensus 146 ~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~----~~~~~~~l~~~l~~aDiVint~P~ 219 (287)
T TIGR02853 146 DFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-MGL----IPFPLNKLEEKVAEIDIVINTIPA 219 (287)
T ss_pred CCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCC----eeecHHHHHHHhccCCEEEECCCh
Confidence 35678999999999 999999999999999999999999887665432 221 1122223222 2344541111
Q ss_pred CccCccccccCCCCcEEEeec-cCCc
Q 006768 519 KWITPREQNWAPPGTHFHQFV-VPPI 543 (632)
Q Consensus 519 ~~~~~~d~~~~~~G~vv~d~~-~P~~ 543 (632)
..++.+....++++++++|.+ .|..
T Consensus 220 ~ii~~~~l~~~k~~aliIDlas~Pg~ 245 (287)
T TIGR02853 220 LVLTADVLSKLPKHAVIIDLASKPGG 245 (287)
T ss_pred HHhCHHHHhcCCCCeEEEEeCcCCCC
Confidence 112222334467899999999 7765
No 242
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.53 E-value=0.0002 Score=76.47 Aligned_cols=124 Identities=13% Similarity=0.095 Sum_probs=82.5
Q ss_pred cccccccccc-cCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHHHHHHH-cC-CcEEEE
Q 006768 402 LAALNKNESL-NGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCR-KR-VRVLML 478 (632)
Q Consensus 402 LGa~n~~~~l-~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA~~La~-~G-~~V~l~ 478 (632)
.|+.|. + ..+|.++..| ||+.|+.++..+. +.+.++++|.|+ |+.|++.+..++. ++ .+|.+.
T Consensus 98 tG~~~a---i~~d~~~lt~~r--------T~a~~~~a~~~la--~~~~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~ 163 (330)
T PRK08291 98 TGLVEA---LLLDNGYLTDVR--------TAAAGAVAARHLA--REDASRAAVIGA-GEQARLQLEALTLVRPIREVRVW 163 (330)
T ss_pred CCceEE---EEcCCchHHHHH--------HHHHHHHHHHHhC--CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEE
Confidence 466776 4 4667777787 8998888887654 456689999999 9999999999986 55 489999
Q ss_pred ecCHHHHHHHHHHcCCCccEEEEeCCCHHH-HHHHHhhh--cCCccCccccccCCCCcEEEeec
Q 006768 479 TLSTERFQKIQKEAPIDCQNYLVQVTKYQA-AQHSKTWI--VGKWITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 479 ~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~-~~~~di~~--~g~~~~~~d~~~~~~G~vv~d~~ 539 (632)
+|+.++++++++++.++.........|.++ ++++|+-. ........+..++++|+.+..+.
T Consensus 164 ~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p~i~~~~l~~g~~v~~vg 227 (330)
T PRK08291 164 ARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEPILKAEWLHPGLHVTAMG 227 (330)
T ss_pred cCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCcEecHHHcCCCceEEeeC
Confidence 999999999998875432221112345443 45556411 11111111233478888877654
No 243
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.51 E-value=0.00024 Score=68.46 Aligned_cols=57 Identities=21% Similarity=0.229 Sum_probs=51.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+|+||||.+|+.+++.|.++|.+|+++.|++++.++ ...+....+|+.|.++++++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~a 57 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAA 57 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeeehhhhhhhhh
Confidence 6899999999999999999999999999999998887 45677888899999888655
No 244
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.51 E-value=0.00022 Score=76.04 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=79.5
Q ss_pred ccccccccc-cCCCceEEeccCCCccceecCchhhHHHHHhhCCCCCcEEEEecCCchHHHHHHHHHH-HcCC-cEEEEe
Q 006768 403 AALNKNESL-NGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLC-RKRV-RVLMLT 479 (632)
Q Consensus 403 Ga~n~~~~l-~~~g~l~~~~~p~l~v~vtdG~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA~~La-~~G~-~V~l~~ 479 (632)
|+.|. + ..+|.++..| |++-|..++..+. +.+.++++|.|+ |+.|+..++.|+ .++. +|.+.+
T Consensus 96 G~~~a---i~~d~~~lT~~R--------Taa~~~laa~~la--~~~~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~ 161 (326)
T TIGR02992 96 GLLQA---LLLDNGYLTDVR--------TAAAGAVAARHLA--REDSSVVAIFGA-GMQARLQLEALTLVRDIRSARIWA 161 (326)
T ss_pred CCceE---EEcCCchHHHHH--------HHHHHHHHHHHhC--CCCCcEEEEECC-CHHHHHHHHHHHHhCCccEEEEEC
Confidence 44554 3 3555666666 7777777766543 346789999999 999999999998 4674 799999
Q ss_pred cCHHHHHHHHHHcCCCccEEEEeCCCHHH-HHHHHh--hhcCCccCccccccCCCCcEEEeec
Q 006768 480 LSTERFQKIQKEAPIDCQNYLVQVTKYQA-AQHSKT--WIVGKWITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 480 R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~-~~~~di--~~~g~~~~~~d~~~~~~G~vv~d~~ 539 (632)
|+.++++++++++..+.........+.++ ++++|+ ..........+..++++|+++..+.
T Consensus 162 R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~l~~g~~i~~vg 224 (326)
T TIGR02992 162 RDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEWLEPGQHVTAMG 224 (326)
T ss_pred CCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHHcCCCcEEEeeC
Confidence 99999999998875332221223445443 456665 1111111111233578999888665
No 245
>PLN02686 cinnamoyl-CoA reductase
Probab=97.49 E-value=0.00036 Score=75.61 Aligned_cols=67 Identities=21% Similarity=0.189 Sum_probs=51.9
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc--------CCCccEEEEeCCCHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA--------PIDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i--------~~~~~~~~~Dvsd~~~~~~ 511 (632)
...+|+|+||||+|+||+++++.|+++|++|+++.|+.++.+++.+.. ...+..+.+|++|.+++.+
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~ 124 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE 124 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH
Confidence 356899999999999999999999999999998888877666553210 1134566779999877643
No 246
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.48 E-value=0.00022 Score=72.19 Aligned_cols=56 Identities=23% Similarity=0.342 Sum_probs=47.1
Q ss_pred cCC--chHHHHHHHHHHHcCCcEEEEecCHHH----HHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 455 GAT--SKLGRAIALYLCRKRVRVLMLTLSTER----FQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 455 Gas--gGIG~aiA~~La~~G~~V~l~~R~~e~----l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|++ +|||+++|++|+++|++|++++|+.++ ++++.++.+.+ .+.+|++|.+++++.
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~ 62 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEAL 62 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHH
Confidence 556 999999999999999999999999987 55566666544 588899999998765
No 247
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.47 E-value=0.00034 Score=71.33 Aligned_cols=59 Identities=24% Similarity=0.212 Sum_probs=48.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTK 505 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd 505 (632)
..+++++||||+|++|+++++.|+++|.+|+++.|+.++.++...+ ...+....+|++|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d 73 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTE 73 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc-CCceEEEEeeCCC
Confidence 4578999999999999999999999999999999998876654332 2245667789987
No 248
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.47 E-value=0.00026 Score=75.62 Aligned_cols=63 Identities=21% Similarity=0.216 Sum_probs=48.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH-----HHHHHHHHc----CCCccEEEEeCCCHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE-----RFQKIQKEA----PIDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e-----~l~~l~~~i----~~~~~~~~~Dvsd~~~~~~ 511 (632)
|+++||||+|.||+.++++|+++|.+|++++|+.+ +++++.++. ...+....+|++|.+++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 72 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRR 72 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHH
Confidence 68999999999999999999999999999998753 344433222 1235677889999887744
No 249
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.46 E-value=0.0003 Score=70.43 Aligned_cols=62 Identities=24% Similarity=0.397 Sum_probs=49.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHHHc---CCCccEEEEeCCCHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQKEA---PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++|||++|+||+.+|+.|+++|++|++++|+. ++++++.+++ +.++....+|++|.++++++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 66 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAV 66 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 58999999999999999999999999998874 4555554444 33456788899999887654
No 250
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=97.43 E-value=0.00054 Score=66.56 Aligned_cols=63 Identities=22% Similarity=0.324 Sum_probs=46.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-cEEEEecCH---HHHHHHHHH---cCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRV-RVLMLTLST---ERFQKIQKE---APIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~---e~l~~l~~~---i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++|||++||+|..+|+.|+++|. +|++++|+. .+.++..++ .+.++....+|++|.++++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~ 71 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAA 71 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHH
Confidence 589999999999999999999995 899999982 122223232 245677888999999999776
No 251
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.41 E-value=0.00032 Score=74.14 Aligned_cols=66 Identities=14% Similarity=0.051 Sum_probs=49.9
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHc-----CCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEA-----PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i-----~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.||+++||||+|.||+.+++.|+++|.+|+++.|+.++.+++.+.. ...+....+|++|.++++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQA 74 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHH
Confidence 5789999999999999999999999999998888865444332211 12455667799988776443
No 252
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.37 E-value=0.00029 Score=66.30 Aligned_cols=64 Identities=17% Similarity=0.214 Sum_probs=47.1
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHH---HH---cCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLSTERFQKIQ---KE---APIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~e~l~~l~---~~---i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+||+|+++++.|+++|. .|++++|+++..++.. ++ .+.+...+.+|+++.+++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAA 71 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 5789999999999999999999997 6888888754332211 12 233455677899998877554
No 253
>PLN02601 beta-carotene hydroxylase
Probab=97.37 E-value=0.00088 Score=67.20 Aligned_cols=131 Identities=22% Similarity=0.285 Sum_probs=71.4
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHHHHH-HcCCCchhhHhhcccCCCCCCCChhhhHHhhHHHHHHHHHHHHHHHHH
Q 006768 113 ESLPRWNTKGFIALQILHVAVSEPLYYVLHR-HFHRNKYLFIHYHSLHHSSPVPQIPTAGHATLLEHIVLSAIVAIPILG 191 (632)
Q Consensus 113 ~~~p~w~~~~~~~~~~~~~~~~d~~~Yw~HR-~~H~~~~ly~~~H~~HH~~~~~~~~~~~~~hp~E~~~~~~~~~ip~~~ 191 (632)
.+.|.-.-.+.++.++..++..|++-.|.|| ++|- +.|.+|+-||+...-. +- ..+ + +.+++++|.+.
T Consensus 126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG---~LW~lH~sHH~Pr~g~-FE--~ND-l----FaVifAvpAIa 194 (303)
T PLN02601 126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD---SLWNMHESHHKPREGA-FE--LND-V----FAIVNAVPAIG 194 (303)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cchhhhhhcCCCCCCC-cc--ccc-c----hhhhhHHHHHH
Confidence 4566422212233444455666999999999 6776 5789999999876421 11 111 1 11112223222
Q ss_pred Hhhccchh-------------HHHHHHHHHHHHHHhhhcccceeeccccccccccchhhhccCccccccccc--CCCCCc
Q 006768 192 SSIIGYGS-------------ISLIYGYILMFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHT--EKDSNF 256 (632)
Q Consensus 192 ~~~~g~~~-------------~~~~~~~~~~~~~~~~~~H~~~~~~p~~~~~~~p~l~~l~~tp~~H~lHH~--~~~~Ny 256 (632)
.+.+|..+ -.+.++ +.|+.+...+.|--+.+.|. .+-|+++.+ ..-|.+||+ ....+|
T Consensus 195 L~~~G~~~~g~~p~~~fgiGlGITlYG-iaYffVHDgLVHqRfp~~~~---a~~~Y~rrl---~~AHklHHa~Ke~Gv~F 267 (303)
T PLN02601 195 LLYYGFFNKGLVPGLCFGAGLGITVFG-MAYMFVHDGLVHKRFPVGPI---ANVPYLRKV---AAAHQLHHTDKFKGVPY 267 (303)
T ss_pred HHHHhhccccccHHHHHHHHHhHHHHH-HHHHHHhhhhhccccccCCC---CCCHHHHHH---HHHHHhhccCCcCCccc
Confidence 22222210 112221 24666677778876655332 123566663 568999998 347799
Q ss_pred ccCch
Q 006768 257 CLFMP 261 (632)
Q Consensus 257 g~~~~ 261 (632)
|.++.
T Consensus 268 Gfll~ 272 (303)
T PLN02601 268 GLFLG 272 (303)
T ss_pred eEEec
Confidence 98654
No 254
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.37 E-value=0.00022 Score=71.54 Aligned_cols=55 Identities=18% Similarity=0.110 Sum_probs=45.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKY 506 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~ 506 (632)
..+|+++||||+||||+++|+.|+++|++|++++|+.+.. ...++....+|+++.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~ 57 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLSDD 57 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChHHH
Confidence 5689999999999999999999999999999999975431 223455667888876
No 255
>PLN00203 glutamyl-tRNA reductase
Probab=97.31 E-value=0.00073 Score=76.08 Aligned_cols=158 Identities=18% Similarity=0.236 Sum_probs=89.6
Q ss_pred hHhHHHHHHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecCc-hhh-HH--HHHhhCC---CCCcEE
Q 006768 379 TGINKQIEDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGN-TCT-AA--VILNELP---KDVKEV 451 (632)
Q Consensus 379 ~~i~~~i~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG~-slt-aa--~~~~~i~---~~gk~v 451 (632)
+-|-.++.+|...|.+.|..=.-|.-+=+ . .+.+.|.=+....+-.|. |.. +| ++.+.++ ..++++
T Consensus 197 ~QIlgQVK~A~~~A~~~g~~g~~L~~LF~-~------Ai~~~KrVRteT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkV 269 (519)
T PLN00203 197 GQILAQVKQVVKVGQGVDGFGRNLSGLFK-H------AITAGKRVRTETNIASGAVSVSSAAVELALMKLPESSHASARV 269 (519)
T ss_pred hHHHHHHHHHHHHHHHcCCccHHHHHHHH-H------HHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEE
Confidence 45667888999999888865333332222 0 111111000011111221 222 22 2333343 568999
Q ss_pred EEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHH-HHHHHHh----hhcCC-ccCcc
Q 006768 452 FLTGATSKLGRAIALYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQ-AAQHSKT----WIVGK-WITPR 524 (632)
Q Consensus 452 lVtGasgGIG~aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~-~~~~~di----~~~g~-~~~~~ 524 (632)
+|.|+ |++|++++..|+..|+ +|++++|+.+++++++++++. ......+..+.. .+..+|+ +..+. .+..+
T Consensus 270 lVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~e 347 (519)
T PLN00203 270 LVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPLDEMLACAAEADVVFTSTSSETPLFLKE 347 (519)
T ss_pred EEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecHhhHHHHHhcCCEEEEccCCCCCeeCHH
Confidence 99999 9999999999999996 799999999999999988752 212222333332 2344554 11112 12222
Q ss_pred ccccCC-------CCcEEEeeccCCccc
Q 006768 525 EQNWAP-------PGTHFHQFVVPPILH 545 (632)
Q Consensus 525 d~~~~~-------~G~vv~d~~~P~~~~ 545 (632)
....++ ...+++|+++|++.+
T Consensus 348 ~l~~~~~~~~~~~~~~~~IDLAvPRdId 375 (519)
T PLN00203 348 HVEALPPASDTVGGKRLFVDISVPRNVG 375 (519)
T ss_pred HHHHhhhcccccCCCeEEEEeCCCCCCc
Confidence 211121 235889999999843
No 256
>PLN00198 anthocyanidin reductase; Provisional
Probab=97.31 E-value=0.00054 Score=72.99 Aligned_cols=67 Identities=19% Similarity=0.174 Sum_probs=50.0
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH--HHcC--CCccEEEEeCCCHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQ--KEAP--IDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~--~~i~--~~~~~~~~Dvsd~~~~~~ 511 (632)
|.++|+++||||+|.||+.+++.|+++|.+|+++.|+.+...... ..+. .++..+.+|++|.+++..
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 76 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEA 76 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHH
Confidence 567899999999999999999999999999988888765433222 1222 134566779998877644
No 257
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.29 E-value=0.00081 Score=67.88 Aligned_cols=120 Identities=13% Similarity=0.045 Sum_probs=74.2
Q ss_pred hhhHHHHHhhCCCCCcEEEEecCCchHHHHHHHHHHHcCC---cEEEEecC----HHHH-------HHHHHHcCCCccEE
Q 006768 434 TCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRV---RVLMLTLS----TERF-------QKIQKEAPIDCQNY 499 (632)
Q Consensus 434 sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~---~V~l~~R~----~e~l-------~~l~~~i~~~~~~~ 499 (632)
++..++...+.+.++++++|.|| ||.|+++|..|++.|. +|.+++|+ .++. ++++++.+..
T Consensus 11 G~~~al~~~g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~---- 85 (226)
T cd05311 11 GLLNALKLVGKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPE---- 85 (226)
T ss_pred HHHHHHHHhCCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccC----
Confidence 34444444455678899999999 9999999999999996 59999998 4543 3343433211
Q ss_pred EEeCCCH-HHHHHHHh----hhcCCccCccccccCCCCcEEEeeccCCc----cccC-CCe-EEecCCeeec
Q 006768 500 LVQVTKY-QAAQHSKT----WIVGKWITPREQNWAPPGTHFHQFVVPPI----LHFR-RDC-TYGDLAAMRL 560 (632)
Q Consensus 500 ~~Dvsd~-~~~~~~di----~~~g~~~~~~d~~~~~~G~vv~d~~~P~~----~~~r-~d~-~~~~g~~M~~ 560 (632)
..+. +. +.++++|+ +..|. .+++......++.+++|.++|.. .+++ .++ .+.+|..|..
T Consensus 86 ~~~~-~l~~~l~~~dvlIgaT~~G~-~~~~~l~~m~~~~ivf~lsnP~~e~~~~~A~~~ga~i~a~G~~~~~ 155 (226)
T cd05311 86 KTGG-TLKEALKGADVFIGVSRPGV-VKKEMIKKMAKDPIVFALANPVPEIWPEEAKEAGADIVATGRSDFP 155 (226)
T ss_pred cccC-CHHHHHhcCCEEEeCCCCCC-CCHHHHHhhCCCCEEEEeCCCCCcCCHHHHHHcCCcEEEeCCCCCc
Confidence 1122 33 45555554 22222 23333333456777778888765 2222 677 4888877753
No 258
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.28 E-value=0.00079 Score=72.66 Aligned_cols=90 Identities=13% Similarity=0.139 Sum_probs=68.0
Q ss_pred cEEEEecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH----Hh--hhcCCcc
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKR-VRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS----KT--WIVGKWI 521 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G-~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~----di--~~~g~~~ 521 (632)
++++|.|| |++|+++|..||+.| .+|++++|+.++++++.+....++...++|+.|.+++.++ |+ .......
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 57899999 999999999999999 7999999999999999888766788999999999877544 22 1111111
Q ss_pred Ccc-ccccCCCCcEEEeec
Q 006768 522 TPR-EQNWAPPGTHFHQFV 539 (632)
Q Consensus 522 ~~~-d~~~~~~G~vv~d~~ 539 (632)
... -+..+..|+.++|.+
T Consensus 81 ~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 81 DLTILKACIKTGVDYVDTS 99 (389)
T ss_pred hHHHHHHHHHhCCCEEEcc
Confidence 111 112245788888888
No 259
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.28 E-value=0.0005 Score=73.37 Aligned_cols=66 Identities=15% Similarity=0.160 Sum_probs=49.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH-----HHHHHHHHc---CCCccEEEEeCCCHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE-----RFQKIQKEA---PIDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e-----~l~~l~~~i---~~~~~~~~~Dvsd~~~~~~ 511 (632)
.++|+|+||||+|+||+++++.|+++|.+|++++|+.+ +++.+.++. ...+....+|++|.+++++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence 45789999999999999999999999999999988653 233332211 1235567789999877744
No 260
>PLN02572 UDP-sulfoquinovose synthase
Probab=97.27 E-value=0.00083 Score=74.66 Aligned_cols=66 Identities=18% Similarity=0.287 Sum_probs=47.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH--------------------HHHHHHHHHcCCCccEEEEeCCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST--------------------ERFQKIQKEAPIDCQNYLVQVTK 505 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~--------------------e~l~~l~~~i~~~~~~~~~Dvsd 505 (632)
.++|+|+||||+|.||+.+++.|+++|++|++++|.. ++++...+....++..+.+|++|
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d 124 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD 124 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence 4578999999999999999999999999999876421 11111111112245667789999
Q ss_pred HHHHHH
Q 006768 506 YQAAQH 511 (632)
Q Consensus 506 ~~~~~~ 511 (632)
.+++++
T Consensus 125 ~~~v~~ 130 (442)
T PLN02572 125 FEFLSE 130 (442)
T ss_pred HHHHHH
Confidence 887754
No 261
>PLN02650 dihydroflavonol-4-reductase
Probab=97.25 E-value=0.00075 Score=72.35 Aligned_cols=66 Identities=12% Similarity=0.131 Sum_probs=50.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC-----CCccEEEEeCCCHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP-----IDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~-----~~~~~~~~Dvsd~~~~~~ 511 (632)
...|+++||||+|.||+.++++|+++|.+|++++|+.++.+++..... .++..+..|++|.+++++
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~ 73 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDD 73 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHH
Confidence 356889999999999999999999999999999998766555433221 134566779998776644
No 262
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.23 E-value=0.001 Score=72.74 Aligned_cols=69 Identities=17% Similarity=0.198 Sum_probs=53.1
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHH------HHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQK------IQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~------l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+....+++++||||+|.||+.+++.|.++|.+|+++.|+.++.+. ..+. ...+....+|++|.++++++
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~~ 129 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE-LPGAEVVFGDVTDADSLRKV 129 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh-cCCceEEEeeCCCHHHHHHH
Confidence 334568899999999999999999999999999999998765431 1111 23466788899999887543
No 263
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.20 E-value=0.00079 Score=74.77 Aligned_cols=116 Identities=18% Similarity=0.248 Sum_probs=77.3
Q ss_pred HHHHHHHHHcCCceeecccccccccccC-CCceEEecc--CCC-ccceecCc-hhhHHHHHhhCCCCCcEEEEecCCchH
Q 006768 386 EDAILRADRLGVKVLSLAALNKNESLNG-GGTLFVDKH--PNL-KVRVVHGN-TCTAAVILNELPKDVKEVFLTGATSKL 460 (632)
Q Consensus 386 ~~ai~~a~~~g~~v~~LGa~n~~~~l~~-~g~l~~~~~--p~l-~v~vtdG~-sltaa~~~~~i~~~gk~vlVtGasgGI 460 (632)
++..+.+.+.|++|..+-.+-+ +.. .+. .++- .+| +-.-+..+ +...+ -..||+|+||||+|.|
T Consensus 194 ~~i~~~l~~~~~~v~~lP~~~~---l~~~~~~--lreI~ieDLLgR~pV~~d~~~i~~------~~~gK~vLVTGagGSi 262 (588)
T COG1086 194 RRILLRLARTGIAVRILPQLTD---LKDLNGQ--LREIEIEDLLGRPPVALDTELIGA------MLTGKTVLVTGGGGSI 262 (588)
T ss_pred HHHHHHHHhcCCcEEecCcHHH---HHHhccc--cccCCHHHHhCCCCCCCCHHHHHh------HcCCCEEEEeCCCCcH
Confidence 3446669999999998887776 222 111 1100 000 00000000 11111 1469999999999999
Q ss_pred HHHHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCC-----CccEEEEeCCCHHHHHHH
Q 006768 461 GRAIALYLCRKRV-RVLMLTLSTERFQKIQKEAPI-----DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 461 G~aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~-----~~~~~~~Dvsd~~~~~~~ 512 (632)
|.++++++++.+. ++++.+|++-+..++..++.. +...+.+||.|.+.+..+
T Consensus 263 Gsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~ 320 (588)
T COG1086 263 GSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERA 320 (588)
T ss_pred HHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHH
Confidence 9999999999995 899999999888887777643 345677899999888554
No 264
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.00065 Score=66.53 Aligned_cols=48 Identities=21% Similarity=0.360 Sum_probs=41.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||+||||+++|+.|+++ .+|++++|+.+ .+.+|++|.+++++.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~~~~~~~~ 49 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITDPASIRAL 49 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCChHHHHHH
Confidence 6899999999999999999999 99999998753 357899999888665
No 265
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=97.18 E-value=0.00063 Score=71.69 Aligned_cols=65 Identities=12% Similarity=0.066 Sum_probs=47.5
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH--c---CCCccEEEEeCCCHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE--A---PIDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~--i---~~~~~~~~~Dvsd~~~~~~ 511 (632)
++|+++||||+|.||+.++++|+++|.+|+++.|+.++.+..... . ..++..+..|++|.++++.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDS 72 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHH
Confidence 468999999999999999999999999999888876543222111 1 1244566778887766543
No 266
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.17 E-value=0.00071 Score=74.75 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=63.6
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHH-HHHHHHh--hhcCC-
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQ-AAQHSKT--WIVGK- 519 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~-~~~~~di--~~~g~- 519 (632)
+..+++++|.|+ |++|+.++..|...|+ +|++++|+.+++++++++++.. ..+..+.. .+..+|+ ...+.
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~----~~~~~~~~~~l~~aDvVI~aT~s~ 253 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE----AIPLDELPEALAEADIVISSTGAP 253 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc----EeeHHHHHHHhccCCEEEECCCCC
Confidence 367899999998 9999999999999997 8999999999999998887632 12222222 2233444 11111
Q ss_pred --ccCcccccc-----CCCCcEEEeeccCCccc
Q 006768 520 --WITPREQNW-----APPGTHFHQFVVPPILH 545 (632)
Q Consensus 520 --~~~~~d~~~-----~~~G~vv~d~~~P~~~~ 545 (632)
.++.+.... -..+.+++|++.|++.+
T Consensus 254 ~~~i~~~~l~~~~~~~~~~~~vviDla~Prdid 286 (423)
T PRK00045 254 HPIIGKGMVERALKARRHRPLLLVDLAVPRDIE 286 (423)
T ss_pred CcEEcHHHHHHHHhhccCCCeEEEEeCCCCCCc
Confidence 122221110 12457899999998843
No 267
>PLN02240 UDP-glucose 4-epimerase
Probab=97.15 E-value=0.0013 Score=70.16 Aligned_cols=67 Identities=12% Similarity=0.141 Sum_probs=49.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH----HHHHHHHH---cCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE----RFQKIQKE---APIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e----~l~~l~~~---i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..+|+++||||+|++|+++++.|+++|.+|++++|... ..+++.+. ...++....+|++|.++++.+
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~ 76 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKV 76 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHH
Confidence 46789999999999999999999999999999876422 22233222 123455677899998877543
No 268
>PLN02214 cinnamoyl-CoA reductase
Probab=97.15 E-value=0.0011 Score=71.03 Aligned_cols=66 Identities=17% Similarity=0.090 Sum_probs=49.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH-HHHcC---CCccEEEEeCCCHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKI-QKEAP---IDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l-~~~i~---~~~~~~~~Dvsd~~~~~~ 511 (632)
.++|+++||||+|.||+.+++.|+++|.+|+.+.|+.++.... .+++. .++....+|++|.++++.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 77 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKA 77 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHH
Confidence 4678999999999999999999999999999999986643221 12221 234556679988776643
No 269
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.15 E-value=0.00062 Score=71.69 Aligned_cols=38 Identities=24% Similarity=0.244 Sum_probs=33.7
Q ss_pred CCCCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecC
Q 006768 444 LPKDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 444 i~~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
+..+||+++||||+ +|||+++|+.|+++|++|++.+|.
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 34689999999995 899999999999999999997654
No 270
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.09 E-value=0.00098 Score=66.86 Aligned_cols=59 Identities=14% Similarity=0.159 Sum_probs=43.4
Q ss_pred cEEEEecCCchHHHHHHHHHHHcC--CcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKR--VRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G--~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++++||||+||||+++|++|+++| ..|.+..|+... +. -..++...++|++|.++++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~~---~~~~~~~~~~Dls~~~~~~~~ 61 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--DF---QHDNVQWHALDVTDEAEIKQL 61 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--cc---ccCceEEEEecCCCHHHHHHH
Confidence 479999999999999999999986 556666665432 11 123455678999999887654
No 271
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.01 E-value=0.0016 Score=69.03 Aligned_cols=155 Identities=19% Similarity=0.167 Sum_probs=88.8
Q ss_pred hHhHHHHHHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecC-chhhH-HHH--HhhC-CCCCcEEEE
Q 006768 379 TGINKQIEDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHG-NTCTA-AVI--LNEL-PKDVKEVFL 453 (632)
Q Consensus 379 ~~i~~~i~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG-~slta-a~~--~~~i-~~~gk~vlV 453 (632)
+-|-.++.+|.+.|.+.|..-.-|..+=+. .+....+ +. ....+..+ -+.+. |+. .... ...+++++|
T Consensus 111 ~qIlgQvk~A~~~a~~~g~~~~~L~~lf~~-a~~~~k~--vr----~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~V 183 (311)
T cd05213 111 TQILGQVKNAYKLAKEAGTSGKLLNRLFQK-AIKVGKR--VR----TETGISRGAVSISSAAVELAEKIFGNLKGKKVLV 183 (311)
T ss_pred hHHHHHHHHHHHHHHHcCCchHHHHHHHHH-HHHHHHH--Hh----hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEE
Confidence 457788899999999988876655544331 0110000 00 11111112 12221 111 1111 147899999
Q ss_pred ecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH-HHHHHh--hhcCCccC---cccc
Q 006768 454 TGATSKLGRAIALYLCRKR-VRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA-AQHSKT--WIVGKWIT---PREQ 526 (632)
Q Consensus 454 tGasgGIG~aiA~~La~~G-~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~-~~~~di--~~~g~~~~---~~d~ 526 (632)
.|+ |.+|+.+++.|...| .+|++++|+.++.++++++++.. ..+..+..+ +..+|+ ...+..-. ..+.
T Consensus 184 iGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~----~~~~~~~~~~l~~aDvVi~at~~~~~~~~~~~~ 258 (311)
T cd05213 184 IGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN----AVPLDELLELLNEADVVISATGAPHYAKIVERA 258 (311)
T ss_pred ECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe----EEeHHHHHHHHhcCCEEEECCCCCchHHHHHHH
Confidence 998 999999999999977 47999999999999999988642 122222222 334454 11111111 0011
Q ss_pred c--cCCCCcEEEeeccCCccc
Q 006768 527 N--WAPPGTHFHQFVVPPILH 545 (632)
Q Consensus 527 ~--~~~~G~vv~d~~~P~~~~ 545 (632)
. ...++.+++|+++|++.+
T Consensus 259 ~~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 259 MKKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred HhhCCCCCeEEEEeCCCCCCc
Confidence 0 112578899999998843
No 272
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.98 E-value=0.0014 Score=85.66 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=33.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHc-CCcEEEEecC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRK-RVRVLMLTLS 481 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~-G~~V~l~~R~ 481 (632)
.+++++||||++|||+++|+.|+++ |++|++++|+
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 5899999999999999999999998 5999999998
No 273
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.98 E-value=0.002 Score=68.17 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=48.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+||||||-+|+.++++|.++|.+|.+++|+.++.+.+.. ..+....+|++|.+++..+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~a 61 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE---WGAELVYGDLSLPETLPPS 61 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh---cCCEEEECCCCCHHHHHHH
Confidence 68999999999999999999999999999999776544332 2355677899998877544
No 274
>PLN02427 UDP-apiose/xylose synthase
Probab=96.93 E-value=0.0018 Score=70.45 Aligned_cols=70 Identities=13% Similarity=0.157 Sum_probs=52.3
Q ss_pred hhCCCCCcEEEEecCCchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHHH----cCCCccEEEEeCCCHHHHHH
Q 006768 442 NELPKDVKEVFLTGATSKLGRAIALYLCRK-RVRVLMLTLSTERFQKIQKE----APIDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 442 ~~i~~~gk~vlVtGasgGIG~aiA~~La~~-G~~V~l~~R~~e~l~~l~~~----i~~~~~~~~~Dvsd~~~~~~ 511 (632)
++-+.+.++|+||||+|-||+.+++.|.++ |.+|+.++|+.++.+.+... ....+....+|++|.+++++
T Consensus 8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 82 (386)
T PLN02427 8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG 82 (386)
T ss_pred CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH
Confidence 344566778999999999999999999998 58999999887766554322 11245667779988877644
No 275
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.91 E-value=0.0017 Score=67.59 Aligned_cols=62 Identities=15% Similarity=0.261 Sum_probs=49.2
Q ss_pred EEEecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHHHHHHHcC----C-CccE----EEEeCCCHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKR-VRVLMLTLSTERFQKIQKEAP----I-DCQN----YLVQVTKYQAAQHS 512 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G-~~V~l~~R~~e~l~~l~~~i~----~-~~~~----~~~Dvsd~~~~~~~ 512 (632)
|+||||+|.||++++++|++.+ .+|++++|++.++-++..++. . .+.. +.+|+.|.+.+..+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~ 72 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI 72 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence 6899999999999999999999 489999999999999988883 1 2322 35599988877544
No 276
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.85 E-value=0.0026 Score=66.92 Aligned_cols=66 Identities=17% Similarity=0.116 Sum_probs=53.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHH--HHHHcC---CCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQK--IQKEAP---IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~--l~~~i~---~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++.|+||||||=||..+++.|.++|.+|..+.|++++-+. ...+++ .....+..|++|+++.+.+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~a 75 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKA 75 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHH
Confidence 67899999999999999999999999999999999876333 244443 2456677799998887554
No 277
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.84 E-value=0.0014 Score=69.00 Aligned_cols=61 Identities=20% Similarity=0.237 Sum_probs=47.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++++||||+|.+|+.+|+.|+++|.+|++++|+.++.+.+. ...+....+|++|.++++++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~~~~l~~~ 61 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE---GLDVEIVEGDLRDPASLRKA 61 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc---cCCceEEEeeCCCHHHHHHH
Confidence 36899999999999999999999999999999876543321 11355677899988777543
No 278
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=96.82 E-value=0.0045 Score=61.41 Aligned_cols=65 Identities=18% Similarity=0.266 Sum_probs=49.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHc-CCcEEEE-ecCHHHH-HHHHHH--cCCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRK-RVRVLML-TLSTERF-QKIQKE--APIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~-G~~V~l~-~R~~e~l-~~l~~~--i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.|.++||||++|||..+++.|.+. |.++++. +|+.|++ +++... ...+++..++|+++.++++++
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~ 72 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNF 72 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHH
Confidence 356999999999999999999875 6776665 5668884 444333 245788999999998888665
No 279
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=96.77 E-value=0.0057 Score=60.78 Aligned_cols=67 Identities=13% Similarity=0.142 Sum_probs=54.0
Q ss_pred CCCCcEEEEecCC--chHHHHHHHHHHHcCCcEEEEecCH---HHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 445 PKDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLMLTLST---ERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 445 ~~~gk~vlVtGas--gGIG~aiA~~La~~G~~V~l~~R~~---e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++||+.+|+|-. .+|+..||+.|.++|+++.....++ .|.++++++++. ...++|||++.++++++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~ 74 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGS-DLVLPCDVTNDESIDAL 74 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccC-CeEEecCCCCHHHHHHH
Confidence 3689999999954 8899999999999999999987664 355666666644 34688999999988665
No 280
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.75 E-value=0.0032 Score=62.04 Aligned_cols=90 Identities=14% Similarity=0.063 Sum_probs=54.8
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-HHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcC----Ccc-C
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS-TERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVG----KWI-T 522 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~-~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g----~~~-~ 522 (632)
+++.|.|+ |.||.++|++|++.|.+|++.+|+ +++.+.+++++...+ .-.++.++++.+|+.+.. ... .
T Consensus 2 ~~~~i~Gt-GniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i----~~~~~~dA~~~aDVVvLAVP~~a~~~v 76 (211)
T COG2085 2 MIIAIIGT-GNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLI----TGGSNEDAAALADVVVLAVPFEAIPDV 76 (211)
T ss_pred cEEEEecc-ChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcccc----ccCChHHHHhcCCEEEEeccHHHHHhH
Confidence 34566665 999999999999999999998665 556666666665431 112345555555541110 000 0
Q ss_pred ccccccCCCCcEEEeeccCCc
Q 006768 523 PREQNWAPPGTHFHQFVVPPI 543 (632)
Q Consensus 523 ~~d~~~~~~G~vv~d~~~P~~ 543 (632)
..+....-.|.+++|..+|.+
T Consensus 77 ~~~l~~~~~~KIvID~tnp~~ 97 (211)
T COG2085 77 LAELRDALGGKIVIDATNPIE 97 (211)
T ss_pred HHHHHHHhCCeEEEecCCCcc
Confidence 011111334889999998854
No 281
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.73 E-value=0.003 Score=59.94 Aligned_cols=103 Identities=18% Similarity=0.155 Sum_probs=63.1
Q ss_pred CchhhHHHH-HhhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHH-HH
Q 006768 432 GNTCTAAVI-LNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQ-AA 509 (632)
Q Consensus 432 G~sltaa~~-~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~-~~ 509 (632)
|.|+.-++. ...+...||+++|.|- |.+|+.+|+.|...|++|+++.+++-++-+...+ . . ++.+.+ .+
T Consensus 6 g~S~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~d--G-f-----~v~~~~~a~ 76 (162)
T PF00670_consen 6 GQSLVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMD--G-F-----EVMTLEEAL 76 (162)
T ss_dssp HHHHHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHT--T-------EEE-HHHHT
T ss_pred chhHHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhc--C-c-----EecCHHHHH
Confidence 345554543 3356688999999998 9999999999999999999999998765544332 1 1 122222 33
Q ss_pred HHHHh--hhcC--CccCccccccCCCCcEEEeec-cCCc
Q 006768 510 QHSKT--WIVG--KWITPREQNWAPPGTHFHQFV-VPPI 543 (632)
Q Consensus 510 ~~~di--~~~g--~~~~~~d~~~~~~G~vv~d~~-~P~~ 543 (632)
+.+|+ +..| +.++.++...+++|+++++.. ++.+
T Consensus 77 ~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 77 RDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTS
T ss_pred hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCcee
Confidence 44554 3333 335667777799999999888 7666
No 282
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.63 E-value=0.0065 Score=63.92 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=60.5
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH-HHHHHhhh--cCC-
Q 006768 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA-AQHSKTWI--VGK- 519 (632)
Q Consensus 444 i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~-~~~~di~~--~g~- 519 (632)
....+++++|.|+ |++|++++..|.+.|++|.+++|+.++.+.. ++.+.+ .++..+.++ ++++|+-+ +..
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~----~~~~~~l~~~l~~aDiVI~t~p~~ 221 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLS----PFHLSELAEEVGKIDIIFNTIPAL 221 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCe----eecHHHHHHHhCCCCEEEECCChh
Confidence 4457999999998 8999999999999999999999998775544 333321 122222222 23344311 111
Q ss_pred ccCccccccCCCCcEEEeec-cCCc
Q 006768 520 WITPREQNWAPPGTHFHQFV-VPPI 543 (632)
Q Consensus 520 ~~~~~d~~~~~~G~vv~d~~-~P~~ 543 (632)
.++.+....+++|.+++|++ .|..
T Consensus 222 ~i~~~~l~~~~~g~vIIDla~~pgg 246 (296)
T PRK08306 222 VLTKEVLSKMPPEALIIDLASKPGG 246 (296)
T ss_pred hhhHHHHHcCCCCcEEEEEccCCCC
Confidence 12222233467899999999 6654
No 283
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.60 E-value=0.0051 Score=62.88 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=50.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.++||||||.+|+.+++.|.++|.+|....|+.+++..+. ..+.....|+.+.++....
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~~~~l~~a 60 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----GGVEVVLGDLRDPKSLVAG 60 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----CCcEEEEeccCCHhHHHHH
Confidence 5899999999999999999999999999999999988876 4566777788888776443
No 284
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.59 E-value=0.0026 Score=66.05 Aligned_cols=57 Identities=19% Similarity=0.148 Sum_probs=44.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||||.+|+.++++|.++|.+|.+..|+.++.+. ..+....+|++|.+++..+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~------~~~~~~~~d~~d~~~l~~a 57 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG------PNEKHVKFDWLDEDTWDNP 57 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC------CCCccccccCCCHHHHHHH
Confidence 37999999999999999999999999999999775421 1233455688888776443
No 285
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.58 E-value=0.0049 Score=65.42 Aligned_cols=63 Identities=11% Similarity=0.081 Sum_probs=44.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHH---HHHHcC-CCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQK---IQKEAP-IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~---l~~~i~-~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||+|+||+.+|+.|+++|.+|++++|..+.... ...++. .+.....+|++|.++++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 68 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEI 68 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHH
Confidence 58999999999999999999999999988764221111 112222 2344567899988877543
No 286
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.51 E-value=0.024 Score=59.91 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=76.2
Q ss_pred CccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHHHHHHHHH-cCC-cEEEEecCHHHHHHHHHHcCC
Q 006768 425 LKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAIALYLCR-KRV-RVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 425 l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~aiA~~La~-~G~-~V~l~~R~~e~l~~l~~~i~~ 494 (632)
....+.||+.+|+ +++.+-+ +.+.++++|.|+ |+.|+..+++++. ++. +|.+.+|+.++++++++++..
T Consensus 94 ~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~ 172 (304)
T PRK07340 94 ERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARA 172 (304)
T ss_pred cEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4567889999884 2233333 457799999999 9999999999986 564 799999999999999998753
Q ss_pred CccEEEEeCCCHH-HHHHHHhhhc-CCccCccccccCCCCcEEEeec--cCCc
Q 006768 495 DCQNYLVQVTKYQ-AAQHSKTWIV-GKWITPREQNWAPPGTHFHQFV--VPPI 543 (632)
Q Consensus 495 ~~~~~~~Dvsd~~-~~~~~di~~~-g~~~~~~d~~~~~~G~vv~d~~--~P~~ 543 (632)
.... ..+.+.+ .++++|+-.. ...-.|.-..++++|+++..+. .|.+
T Consensus 173 ~~~~--~~~~~~~~av~~aDiVitaT~s~~Pl~~~~~~~g~hi~~iGs~~p~~ 223 (304)
T PRK07340 173 LGPT--AEPLDGEAIPEAVDLVVTATTSRTPVYPEAARAGRLVVAVGAFTPDM 223 (304)
T ss_pred cCCe--eEECCHHHHhhcCCEEEEccCCCCceeCccCCCCCEEEecCCCCCCc
Confidence 2111 1134444 4566665111 1111121122478999888776 5544
No 287
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=96.48 E-value=0.004 Score=66.67 Aligned_cols=64 Identities=11% Similarity=0.185 Sum_probs=42.9
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEE-EEecCHH--HHHHHHHH-cCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVL-MLTLSTE--RFQKIQKE-APIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~-l~~R~~e--~l~~l~~~-i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+++||||+|.||+++++.|+++|.+++ +.+|..+ +...+... ...++....+|++|.++++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 69 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARV 69 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHH
Confidence 6799999999999999999999998754 4454322 12222211 112344567899988877543
No 288
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=96.45 E-value=0.0051 Score=64.42 Aligned_cols=63 Identities=11% Similarity=0.078 Sum_probs=44.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC--CccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI--DCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~--~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+||||+|+||+++++.|.++|.+|++++|...+..+...++.. .+....+|+++.++++++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 65 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRL 65 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHH
Confidence 478999999999999999999999998876643222211122211 344567799988877544
No 289
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.41 E-value=0.0081 Score=55.97 Aligned_cols=79 Identities=18% Similarity=0.197 Sum_probs=56.5
Q ss_pred hhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCC
Q 006768 442 NELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGK 519 (632)
Q Consensus 442 ~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~ 519 (632)
.+++.+||++.|.|.+.-+|+.+|..|.++|++|.++.++...+++..+ ++|+ ..+|.
T Consensus 22 ~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~--------------------~ADIVvsAtg~ 81 (140)
T cd05212 22 EGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVH--------------------DADVVVVGSPK 81 (140)
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHh--------------------hCCEEEEecCC
Confidence 4678899999999999999999999999999999999865443333222 3332 12222
Q ss_pred ccCccccccCCCCcEEEeeccC
Q 006768 520 WITPREQNWAPPGTHFHQFVVP 541 (632)
Q Consensus 520 ~~~~~d~~~~~~G~vv~d~~~P 541 (632)
. ...+..++++|++++|+...
T Consensus 82 ~-~~i~~~~ikpGa~Vidvg~~ 102 (140)
T cd05212 82 P-EKVPTEWIKPGATVINCSPT 102 (140)
T ss_pred C-CccCHHHcCCCCEEEEcCCC
Confidence 2 22345569999999988733
No 290
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=96.35 E-value=0.007 Score=63.15 Aligned_cols=63 Identities=11% Similarity=0.198 Sum_probs=43.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcC--CcEEEEecCH--HHHHHHHHHc-CCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKR--VRVLMLTLST--ERFQKIQKEA-PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G--~~V~l~~R~~--e~l~~l~~~i-~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||+|++|+++++.|+++| .+|++++|.. .+.+.+.+.. ...+....+|++|.++++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 68 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRL 68 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHH
Confidence 48999999999999999999987 6788877632 1222221111 12455677899998877543
No 291
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.33 E-value=0.024 Score=60.38 Aligned_cols=113 Identities=14% Similarity=0.138 Sum_probs=73.7
Q ss_pred CccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHHHHHHHHH-cCC-cEEEEecCHHHHHHHHHHcCC
Q 006768 425 LKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAIALYLCR-KRV-RVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 425 l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~aiA~~La~-~G~-~V~l~~R~~e~l~~l~~~i~~ 494 (632)
....+.||+.+|+ +++.+-+ +.+.+++.|.|+ |++|+..+..++. .+. +|.+++|++++.+++++++..
T Consensus 96 ~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~ 174 (325)
T PRK08618 96 EVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQS 174 (325)
T ss_pred ceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHH
Confidence 4567889998884 2222333 456789999998 9999999988864 564 899999999999999887643
Q ss_pred CccEEEEeCCCHH-HHHHHHhhhc--CCccCccccccCCCCcEEEeec
Q 006768 495 DCQNYLVQVTKYQ-AAQHSKTWIV--GKWITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 495 ~~~~~~~Dvsd~~-~~~~~di~~~--g~~~~~~d~~~~~~G~vv~d~~ 539 (632)
+.........|.+ .++++|+-.. ...-...+ .++++|++++.+-
T Consensus 175 ~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~iG 221 (325)
T PRK08618 175 KFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHINAVG 221 (325)
T ss_pred hcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEEecC
Confidence 2211111245544 3455665111 11111224 6689999998765
No 292
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.32 E-value=0.035 Score=61.12 Aligned_cols=58 Identities=16% Similarity=0.142 Sum_probs=45.3
Q ss_pred cCchhhHHHHHh-hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH
Q 006768 431 HGNTCTAAVILN-ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQ 489 (632)
Q Consensus 431 dG~sltaa~~~~-~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~ 489 (632)
.|.|...++... ++...||+|+|.|. |.+|+.+|..+...|++|+++++++.+..+..
T Consensus 194 t~~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~ 252 (425)
T PRK05476 194 TGESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA 252 (425)
T ss_pred HHhhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH
Confidence 344444444333 45678999999998 89999999999999999999999988765443
No 293
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.28 E-value=0.0091 Score=65.88 Aligned_cols=154 Identities=19% Similarity=0.188 Sum_probs=87.1
Q ss_pred hHhHHHHHHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccce-ecCchhhHHH---HHhhC-CCCCcEEEE
Q 006768 379 TGINKQIEDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRV-VHGNTCTAAV---ILNEL-PKDVKEVFL 453 (632)
Q Consensus 379 ~~i~~~i~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~v-tdG~sltaa~---~~~~i-~~~gk~vlV 453 (632)
..|..++.+|...|.+.|.--..|..+=+ +.+.. |. -+.. ...+ .++-|...+. +.+.. ...+++++|
T Consensus 113 ~qI~gQvk~a~~~a~~~~~~g~~l~~lf~-~a~~~-~k-~vr~----~t~i~~~~vSv~~~Av~la~~~~~~l~~~~VlV 185 (417)
T TIGR01035 113 TQILGQVKNAYKVAQEEKTVGKVLERLFQ-KAFSV-GK-RVRT----ETDISAGAVSISSAAVELAERIFGSLKGKKALL 185 (417)
T ss_pred hHHHHHHHHHHHHHHHcCCchHHHHHHHH-HHHHH-hh-hhhh----hcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEE
Confidence 34577778888888888775443332222 01111 11 1111 1112 1222333222 22222 367899999
Q ss_pred ecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCH-HHHHHHHh--hhcC---CccCcccc
Q 006768 454 TGATSKLGRAIALYLCRKR-VRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKY-QAAQHSKT--WIVG---KWITPREQ 526 (632)
Q Consensus 454 tGasgGIG~aiA~~La~~G-~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~-~~~~~~di--~~~g---~~~~~~d~ 526 (632)
.|+ |.+|+.+++.|+..| .+|++++|+.+++++++++++.. ..+..+. +.+..+|+ ...+ ..++.++.
T Consensus 186 iGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~----~i~~~~l~~~l~~aDvVi~aT~s~~~ii~~e~l 260 (417)
T TIGR01035 186 IGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE----AVKFEDLEEYLAEADIVISSTGAPHPIVSKEDV 260 (417)
T ss_pred ECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe----EeeHHHHHHHHhhCCEEEECCCCCCceEcHHHH
Confidence 998 999999999999999 68999999999999888887642 1222222 22344454 1111 11222221
Q ss_pred ccC----CCCcEEEeeccCCcc
Q 006768 527 NWA----PPGTHFHQFVVPPIL 544 (632)
Q Consensus 527 ~~~----~~G~vv~d~~~P~~~ 544 (632)
... +.+.+++|.+.|++.
T Consensus 261 ~~~~~~~~~~~~viDla~Prdi 282 (417)
T TIGR01035 261 ERALRERTRPLFIIDIAVPRDV 282 (417)
T ss_pred HHHHhcCCCCeEEEEeCCCCCC
Confidence 111 134588899999884
No 294
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.28 E-value=0.0093 Score=65.24 Aligned_cols=60 Identities=20% Similarity=0.247 Sum_probs=46.1
Q ss_pred CCCCcEEEEecC----------------CchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH
Q 006768 445 PKDVKEVFLTGA----------------TSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA 508 (632)
Q Consensus 445 ~~~gk~vlVtGa----------------sgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~ 508 (632)
+..||+++|||| ||++|+++|++|+++|++|++++++.+ ++ .+. ....+|+++.++
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~~~--~~~~~dv~~~~~ 256 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----TPA--GVKRIDVESAQE 256 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----CCC--CcEEEccCCHHH
Confidence 467999999999 566999999999999999999998752 11 121 234679998887
Q ss_pred HHHH
Q 006768 509 AQHS 512 (632)
Q Consensus 509 ~~~~ 512 (632)
+.+.
T Consensus 257 ~~~~ 260 (399)
T PRK05579 257 MLDA 260 (399)
T ss_pred HHHH
Confidence 7544
No 295
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.27 E-value=0.015 Score=55.55 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=64.1
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC----------CCccEEEEeCCCHHHHHHHHhhhcC
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP----------IDCQNYLVQVTKYQAAQHSKTWIVG 518 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~----------~~~~~~~~Dvsd~~~~~~~di~~~g 518 (632)
+++.+.|. |..|+++|+.|+++|.+|.+.+|++++.+++.++-. +++..+..-+.|.+++++. ..+
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v---~~~ 77 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAV---LFG 77 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHH---HHC
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhh---hhh
Confidence 57889998 999999999999999999999999999999876521 0122233334454444333 111
Q ss_pred CccCccccccCCCCcEEEeec-cCCc----c--c-cCCCeEEecCCeee
Q 006768 519 KWITPREQNWAPPGTHFHQFV-VPPI----L--H-FRRDCTYGDLAAMR 559 (632)
Q Consensus 519 ~~~~~~d~~~~~~G~vv~d~~-~P~~----~--~-~r~d~~~~~g~~M~ 559 (632)
+.+ ...+.+|.+++|.+ ..++ . . .+.++.+++.+.+-
T Consensus 78 ~~i----~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~G 122 (163)
T PF03446_consen 78 ENI----LAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSG 122 (163)
T ss_dssp TTH----GGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEES
T ss_pred hHH----hhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeec
Confidence 111 12368999999999 4444 1 1 12688888877654
No 296
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.20 E-value=0.011 Score=63.58 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=47.8
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH----HHHHHHHcC----CCccEEEEeCCCHHHHH
Q 006768 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTER----FQKIQKEAP----IDCQNYLVQVTKYQAAQ 510 (632)
Q Consensus 444 i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~----l~~l~~~i~----~~~~~~~~Dvsd~~~~~ 510 (632)
+..++|+|+||||+|=||+.+++.|.++|.+|++++|.... .+......+ .++....+|++|.+++.
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~ 85 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQ 85 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHH
Confidence 34567899999999999999999999999999999875432 222221111 13455677998876653
No 297
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.18 E-value=0.013 Score=63.94 Aligned_cols=61 Identities=20% Similarity=0.296 Sum_probs=48.9
Q ss_pred EEEecCCchHHHHHHHHHHHcCC--cEEEEecCHHHHHHHHHH-cCCCccEEEEeCCCHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRV--RVLMLTLSTERFQKIQKE-APIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~--~V~l~~R~~e~l~~l~~~-i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+|.|+ |.+|+++|+.|++++- +|++++|+.+++++++++ ....+....+|+.|.++++++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 64 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAEL 64 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHH
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHH
Confidence 689999 9999999999999984 899999999999999987 445777888999999887554
No 298
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.13 E-value=0.014 Score=56.18 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=55.7
Q ss_pred CCCCcEEEEecCCch-HHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcCCccCc
Q 006768 445 PKDVKEVFLTGATSK-LGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVGKWITP 523 (632)
Q Consensus 445 ~~~gk~vlVtGasgG-IG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g~~~~~ 523 (632)
...+|+++|+|+ |+ +|..+|+.|.++|++|.+++|+.+++.+..++.. .+..-+... ..++.
T Consensus 41 ~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~l~~aD----iVIsat~~~------------~ii~~ 103 (168)
T cd01080 41 DLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTKNLKEHTKQAD----IVIVAVGKP------------GLVKG 103 (168)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCchhHHHHHhhCC----EEEEcCCCC------------ceecH
Confidence 478999999999 66 5999999999999999999998765554444321 111111111 12222
Q ss_pred cccccCCCCcEEEeeccCCccc
Q 006768 524 REQNWAPPGTHFHQFVVPPILH 545 (632)
Q Consensus 524 ~d~~~~~~G~vv~d~~~P~~~~ 545 (632)
++ ++++.+++|++.|++.+
T Consensus 104 ~~---~~~~~viIDla~prdvd 122 (168)
T cd01080 104 DM---VKPGAVVIDVGINRVPD 122 (168)
T ss_pred HH---ccCCeEEEEccCCCccc
Confidence 22 56789999999999854
No 299
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.13 E-value=0.019 Score=56.81 Aligned_cols=50 Identities=16% Similarity=0.193 Sum_probs=45.1
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
+.+.+||++.|+|. |++|+.+|+.|.+.|++|++.+++.+++++++++++
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g 72 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFG 72 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC
Confidence 45678999999999 799999999999999999999999999998887764
No 300
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=96.07 E-value=0.019 Score=59.91 Aligned_cols=65 Identities=15% Similarity=0.176 Sum_probs=51.7
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEec----CHHHHHHHHHHcC--CCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTL----STERFQKIQKEAP--IDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R----~~e~l~~l~~~i~--~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++|+||||+|=||..++.+|.++|..|++++. ..+.++.+++... +.+.....|+.|.+++++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kv 72 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKL 72 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHH
Confidence 578999999999999999999999999998763 2344444444444 5677888999999988655
No 301
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.05 E-value=0.066 Score=59.45 Aligned_cols=143 Identities=15% Similarity=0.121 Sum_probs=83.6
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH-HHHHHh--hhcC-
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA-AQHSKT--WIVG- 518 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~-~~~~di--~~~g- 518 (632)
+....||+++|.|. |.||+++|+.+...|++|+++++++.+..+.... +. ++.+.++ ++.+|+ ...|
T Consensus 249 ~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~-G~-------~~~~leell~~ADIVI~atGt 319 (476)
T PTZ00075 249 DVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAME-GY-------QVVTLEDVVETADIFVTATGN 319 (476)
T ss_pred CCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhc-Cc-------eeccHHHHHhcCCEEEECCCc
Confidence 45678999999998 8999999999999999999998887765433221 11 1222333 344454 1112
Q ss_pred -CccCccccccCCCCcEEEeec-cCCc---cccC--CCe------------EEecCCee--eccCccccccccccCCCch
Q 006768 519 -KWITPREQNWAPPGTHFHQFV-VPPI---LHFR--RDC------------TYGDLAAM--RLPDDVEGLGICEYTMDRG 577 (632)
Q Consensus 519 -~~~~~~d~~~~~~G~vv~d~~-~P~~---~~~r--~d~------------~~~~g~~M--~~P~~~~~~~s~~~~lp~~ 577 (632)
..+..+.....++|.+++++. ...+ .+.+ .++ +.-+|..+ ..-+.+.|+.. ..+.|.-
T Consensus 320 ~~iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~~-~~GhP~~ 398 (476)
T PTZ00075 320 KDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLGC-ATGHPSF 398 (476)
T ss_pred ccccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccCC-CCCCCee
Confidence 223434455568888888877 3321 1001 111 11123322 22455777754 5678888
Q ss_pred hhhHHHHHHHHHhhhccC
Q 006768 578 VVHACHAGGVVHLLEGWT 595 (632)
Q Consensus 578 v~~ac~a~~il~aLEg~~ 595 (632)
||.-..+...+-+++=+.
T Consensus 399 vMd~sfa~Q~la~~~l~~ 416 (476)
T PTZ00075 399 VMSNSFTNQVLAQIELWE 416 (476)
T ss_pred EeeHHHHHHHHHHHHHHh
Confidence 887755544544444443
No 302
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.94 E-value=0.018 Score=57.32 Aligned_cols=60 Identities=22% Similarity=0.276 Sum_probs=45.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+||||+|=+|+++++.|.++|.+|+...|+.........+. .+....+|++|.++++++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~dl~~~~~~~~~ 60 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--NVEFVIGDLTDKEQLEKL 60 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--TEEEEESETTSHHHHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--eEEEEEeecccccccccc
Confidence 689999999999999999999999887777655433333322 455777899988877554
No 303
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=95.87 E-value=0.021 Score=61.01 Aligned_cols=63 Identities=10% Similarity=0.127 Sum_probs=42.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCc-EEEEecCH--HHHHHHHHHc-CCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVR-VLMLTLST--ERFQKIQKEA-PIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~-V~l~~R~~--e~l~~l~~~i-~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||+|.||+.+++.|+++|.+ |+.++|.. ...+.+.+.. +.++....+|++|.++++++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 68 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRI 68 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHH
Confidence 5899999999999999999999976 54455432 2223322211 12345567899998887554
No 304
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.84 E-value=0.029 Score=56.29 Aligned_cols=59 Identities=20% Similarity=0.218 Sum_probs=44.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHH--HHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE--RFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e--~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
|+|+||+|.+|+.++.+|.+.|.+|.++.|+.. ..+++.+ .+ +....+|..|.+++.++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g--~~vv~~d~~~~~~l~~a 61 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LG--AEVVEADYDDPESLVAA 61 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TT--TEEEES-TT-HHHHHHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-cc--ceEeecccCCHHHHHHH
Confidence 689999999999999999999999999999863 3444433 33 34567788888887555
No 305
>PLN02494 adenosylhomocysteinase
Probab=95.80 E-value=0.14 Score=56.75 Aligned_cols=156 Identities=11% Similarity=0.090 Sum_probs=89.3
Q ss_pred cCchhhHHHHHh-hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHH
Q 006768 431 HGNTCTAAVILN-ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAA 509 (632)
Q Consensus 431 dG~sltaa~~~~-~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~ 509 (632)
+|.|..-++... ++...||+++|.|. |.||+.+|+.+...|++|+++++++.+..+.... +.. . .+. .+.+
T Consensus 236 tgqS~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~-G~~--v--v~l--eEal 307 (477)
T PLN02494 236 CRHSLPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALME-GYQ--V--LTL--EDVV 307 (477)
T ss_pred ccccHHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc-CCe--e--ccH--HHHH
Confidence 356665555433 45578999999999 8999999999999999999999988765443222 111 1 111 2233
Q ss_pred HHHHhhh--cCC--ccCccccccCCCCcEEEeeccC-Cc-------cc-------cCCCeEEec----CCee--eccCcc
Q 006768 510 QHSKTWI--VGK--WITPREQNWAPPGTHFHQFVVP-PI-------LH-------FRRDCTYGD----LAAM--RLPDDV 564 (632)
Q Consensus 510 ~~~di~~--~g~--~~~~~d~~~~~~G~vv~d~~~P-~~-------~~-------~r~d~~~~~----g~~M--~~P~~~ 564 (632)
+.+|+.+ .|. .+.......+++|.+++.+..+ .+ .. .+.++.... |... ..-+.+
T Consensus 308 ~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i~ll~eGrl 387 (477)
T PLN02494 308 SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGIIVLAEGRL 387 (477)
T ss_pred hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEEEEEeCCcc
Confidence 4445411 111 1233344557788888777632 11 10 112222222 2223 234557
Q ss_pred ccccccccCCCchhhhHHHHHHHHHhhhccC
Q 006768 565 EGLGICEYTMDRGVVHACHAGGVVHLLEGWT 595 (632)
Q Consensus 565 ~~~~s~~~~lp~~v~~ac~a~~il~aLEg~~ 595 (632)
.|+. |..+-|.-+|...-+-..+-+++-+.
T Consensus 388 vNl~-~~~GhP~evmd~sFa~Q~la~~~l~~ 417 (477)
T PLN02494 388 MNLG-CATGHPSFVMSCSFTNQVIAQLELWN 417 (477)
T ss_pred cccc-CCCCCCcceeeHHHHHHHHHHHHHHh
Confidence 7776 46788888887655544444444443
No 306
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=95.78 E-value=0.014 Score=62.10 Aligned_cols=34 Identities=35% Similarity=0.450 Sum_probs=30.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcC--CcEEEEecCHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKR--VRVLMLTLSTE 483 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G--~~V~l~~R~~e 483 (632)
+|+||||||++|+.+++.|.++| .+|+++.|+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 48999999999999999999999 67999998754
No 307
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.77 E-value=0.065 Score=56.85 Aligned_cols=111 Identities=21% Similarity=0.286 Sum_probs=71.4
Q ss_pred CccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHHHHHHHHH-cC-CcEEEEecCHHHHHHHHHHcCC
Q 006768 425 LKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAIALYLCR-KR-VRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 425 l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~aiA~~La~-~G-~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
....+.||+.+|+ +++.+-+ +.+.++++|.|+ |+.|+.+++.++. ++ .+|.+.+|++++.+++++++.+
T Consensus 94 ~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~ 172 (314)
T PRK06141 94 EPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-GRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRA 172 (314)
T ss_pred CEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-cHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4567889998883 2222223 456899999998 9999999997776 55 5899999999999999988743
Q ss_pred C-ccEEEEeCCCHH-HHHHHHhh--hcCCccCc-cccccCCCCcEEEeec
Q 006768 495 D-CQNYLVQVTKYQ-AAQHSKTW--IVGKWITP-REQNWAPPGTHFHQFV 539 (632)
Q Consensus 495 ~-~~~~~~Dvsd~~-~~~~~di~--~~g~~~~~-~d~~~~~~G~vv~d~~ 539 (632)
. .... ...+.+ .++++|+- ..... .| .+..++++|+++.-..
T Consensus 173 ~g~~~~--~~~~~~~av~~aDIVi~aT~s~-~pvl~~~~l~~g~~i~~ig 219 (314)
T PRK06141 173 QGFDAE--VVTDLEAAVRQADIISCATLST-EPLVRGEWLKPGTHLDLVG 219 (314)
T ss_pred cCCceE--EeCCHHHHHhcCCEEEEeeCCC-CCEecHHHcCCCCEEEeeC
Confidence 2 1111 134444 44566751 11111 22 2234578998655443
No 308
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.74 E-value=0.041 Score=57.32 Aligned_cols=78 Identities=18% Similarity=0.271 Sum_probs=55.1
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCC-
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGK- 519 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~- 519 (632)
.++..||+|+|+|++.=+|+.+|..|.++|++|+++.++...+++..++ +|+ +.+|.
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~--------------------ADIVIsAvg~p 212 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKD--------------------ADVIVSAVGKP 212 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhh--------------------CCEEEECCCCC
Confidence 5578899999999965599999999999999999998865444433332 222 12222
Q ss_pred -ccCccccccCCCCcEEEeeccCCc
Q 006768 520 -WITPREQNWAPPGTHFHQFVVPPI 543 (632)
Q Consensus 520 -~~~~~d~~~~~~G~vv~d~~~P~~ 543 (632)
.+.+ .++++|++++|+..+++
T Consensus 213 ~~i~~---~~vk~gavVIDvGi~~~ 234 (286)
T PRK14175 213 GLVTK---DVVKEGAVIIDVGNTPD 234 (286)
T ss_pred cccCH---HHcCCCcEEEEcCCCcC
Confidence 1333 23789999999996654
No 309
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=95.69 E-value=0.12 Score=56.51 Aligned_cols=58 Identities=19% Similarity=0.231 Sum_probs=44.5
Q ss_pred cCchhhHHHHH-hhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH
Q 006768 431 HGNTCTAAVIL-NELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQ 489 (632)
Q Consensus 431 dG~sltaa~~~-~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~ 489 (632)
+|.|..-++.. .++...||+|+|.|. |.+|+.+|..+...|++|+++++++.+..+..
T Consensus 177 ~g~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~ 235 (406)
T TIGR00936 177 TGQSTIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA 235 (406)
T ss_pred cchhHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH
Confidence 44444444333 245578999999998 99999999999999999999999887754443
No 310
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.66 E-value=0.022 Score=61.76 Aligned_cols=62 Identities=15% Similarity=0.103 Sum_probs=43.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQ 510 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~ 510 (632)
.++|+|+||||+|-||+.+++.|.++|.+|+.++|...... ............|++|.+++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~~~~~~~~~~~~Dl~d~~~~~ 80 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---SEDMFCHEFHLVDLRVMENCL 80 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---ccccccceEEECCCCCHHHHH
Confidence 46789999999999999999999999999999988543211 110111234556777766553
No 311
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=95.30 E-value=0.041 Score=58.86 Aligned_cols=59 Identities=14% Similarity=0.225 Sum_probs=43.1
Q ss_pred cEEEEecCCchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHHHcCCCccEEEEeCC-CHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRK-RVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVT-KYQAA 509 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~-G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvs-d~~~~ 509 (632)
++|+||||+|=||+.+++.|.++ |.+|+.++|+.++...+... ..+....+|++ +.+.+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~ 62 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNH--PRMHFFEGDITINKEWI 62 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccC--CCeEEEeCCCCCCHHHH
Confidence 56999999999999999999986 68999999877654433221 23455667886 54444
No 312
>PRK06046 alanine dehydrogenase; Validated
Probab=95.29 E-value=0.15 Score=54.34 Aligned_cols=148 Identities=19% Similarity=0.214 Sum_probs=85.0
Q ss_pred cCCceeecccccccccccCCCceEEeccC--CCccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHHH
Q 006768 395 LGVKVLSLAALNKNESLNGGGTLFVDKHP--NLKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAI 464 (632)
Q Consensus 395 ~g~~v~~LGa~n~~~~l~~~g~l~~~~~p--~l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~ai 464 (632)
.|+|+++.---|..+-+..-.++..-.++ .....+.||+.+|+ +++.+-+ +.+-+++.|.|+ |+.|+..
T Consensus 66 ~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~-G~qa~~h 144 (326)
T PRK06046 66 AGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGA-GNQARTQ 144 (326)
T ss_pred EEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECC-cHHHHHH
Confidence 46666665444432212111122322222 34567889999884 2222333 456788999998 9999999
Q ss_pred HHHHHH-cCC-cEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh-hhcCCccCc-cccccCCCCcEEEeec-
Q 006768 465 ALYLCR-KRV-RVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT-WIVGKWITP-REQNWAPPGTHFHQFV- 539 (632)
Q Consensus 465 A~~La~-~G~-~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di-~~~g~~~~~-~d~~~~~~G~vv~d~~- 539 (632)
++.++. .+. +|.+++|++++.+++++++.+.......-..|.+++-++|+ .......+| .+..++++|+++..+.
T Consensus 145 ~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~~l~~g~hV~~iGs 224 (326)
T PRK06046 145 LLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAEWIKEGTHINAIGA 224 (326)
T ss_pred HHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHHHcCCCCEEEecCC
Confidence 999985 354 78889999999999988875322111111235554433554 111111112 2344578999988776
Q ss_pred -cCCc
Q 006768 540 -VPPI 543 (632)
Q Consensus 540 -~P~~ 543 (632)
.|.+
T Consensus 225 ~~p~~ 229 (326)
T PRK06046 225 DAPGK 229 (326)
T ss_pred CCCcc
Confidence 4544
No 313
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.28 E-value=0.051 Score=56.93 Aligned_cols=80 Identities=14% Similarity=0.208 Sum_probs=56.2
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcCCccC
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVGKWIT 522 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g~~~~ 522 (632)
+++..||+|.+.|.++-+|+.+|..|.++|++|+++.|+....++..++. ..+..-+.+.+.+
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~A----DIVIsavg~~~~v------------- 216 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQA----DIVVAAVGRPRLI------------- 216 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcC----CEEEEecCChhcc-------------
Confidence 56789999999999889999999999999999999987655444443331 1222222222211
Q ss_pred ccccccCCCCcEEEeec-cC
Q 006768 523 PREQNWAPPGTHFHQFV-VP 541 (632)
Q Consensus 523 ~~d~~~~~~G~vv~d~~-~P 541 (632)
+...+++|++++|+. .+
T Consensus 217 --~~~~ik~GaiVIDvgin~ 234 (301)
T PRK14194 217 --DADWLKPGAVVIDVGINR 234 (301)
T ss_pred --cHhhccCCcEEEEecccc
Confidence 222388999999998 44
No 314
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.12 E-value=0.026 Score=58.81 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=32.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERF 485 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l 485 (632)
.|+||||+|-||+.++.+|.++|.+|..++|...+.
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~ 37 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL 37 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccc
Confidence 389999999999999999999999999999865543
No 315
>PRK05865 hypothetical protein; Provisional
Probab=95.06 E-value=0.053 Score=64.60 Aligned_cols=57 Identities=18% Similarity=0.220 Sum_probs=45.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+++||||+|.||+.++++|.++|.+|++++|+.+.. ....+..+.+|++|.+++.++
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~~~v~~v~gDL~D~~~l~~a 58 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WPSSADFIAADIRDATAVESA 58 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cccCceEEEeeCCCHHHHHHH
Confidence 599999999999999999999999999999875321 122355677899998877543
No 316
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.05 E-value=0.067 Score=45.87 Aligned_cols=60 Identities=23% Similarity=0.306 Sum_probs=44.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcC---CcEEEE-ecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh
Q 006768 450 EVFLTGATSKLGRAIALYLCRKR---VRVLML-TLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT 514 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G---~~V~l~-~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di 514 (632)
++.+.|+ |.+|.++++.|.+.| .+|.++ +|++++.++++++.+..+ ...++.+.++.+|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~adv 64 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA----TADDNEEAAQEADV 64 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE----ESEEHHHHHHHTSE
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc----ccCChHHhhccCCE
Confidence 3566787 999999999999999 899866 999999999999886321 11134445555554
No 317
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.04 E-value=0.079 Score=51.34 Aligned_cols=86 Identities=16% Similarity=0.102 Sum_probs=54.9
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHH-HHHHhhhc------
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAA-QHSKTWIV------ 517 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~-~~~di~~~------ 517 (632)
...||++.|.|. |.||+++|+.|..-|++|+..+|+....+...+ .. . ...+.+++ +++|+-..
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~----~---~~~~l~ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FG----V---EYVSLDELLAQADIVSLHLPLTP 103 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TT----E---EESSHHHHHHH-SEEEE-SSSST
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccc-cc----c---eeeehhhhcchhhhhhhhhcccc
Confidence 467999999998 999999999999999999999998765442211 11 1 22344444 55664111
Q ss_pred --CCccCccccccCCCCcEEEeec
Q 006768 518 --GKWITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 518 --g~~~~~~d~~~~~~G~vv~d~~ 539 (632)
...++.+.....++|++++.++
T Consensus 104 ~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 104 ETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp TTTTSBSHHHHHTSTTTEEEEESS
T ss_pred ccceeeeeeeeeccccceEEEecc
Confidence 1223444455567788777776
No 318
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.98 E-value=0.042 Score=53.01 Aligned_cols=142 Identities=15% Similarity=0.085 Sum_probs=83.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH----Hh--hhcCCcc--
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS----KT--WIVGKWI-- 521 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~----di--~~~g~~~-- 521 (632)
++.|.||||.+|..++....++|.+|+.+.||++|..+. +.....+.|+.|++++... |+ ...+...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~ 76 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASD 76 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----ccceeecccccChhhhHhhhcCCceEEEeccCCCCC
Confidence 578999999999999999999999999999999887553 1122344455555543111 11 0000000
Q ss_pred ---------------------------CccccccCCCCcEEEeec-cCCc----------------cccCCCeEEecCCe
Q 006768 522 ---------------------------TPREQNWAPPGTHFHQFV-VPPI----------------LHFRRDCTYGDLAA 557 (632)
Q Consensus 522 ---------------------------~~~d~~~~~~G~vv~d~~-~P~~----------------~~~r~d~~~~~g~~ 557 (632)
.-.-...+.+|+.+.|.- +|.+ .+...+-++.+-.+
T Consensus 77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa 156 (211)
T COG2910 77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAA 156 (211)
T ss_pred hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHH
Confidence 000011244667777777 7765 11226778888888
Q ss_pred eeccCcccc-cccc------ccCCCchhhhHHHHHHHHHhhhccCc
Q 006768 558 MRLPDDVEG-LGIC------EYTMDRGVVHACHAGGVVHLLEGWTH 596 (632)
Q Consensus 558 M~~P~~~~~-~~s~------~~~lp~~v~~ac~a~~il~aLEg~~~ 596 (632)
|..|+.-.| +... +..-..++.++=-|.+|+.-+|.=.+
T Consensus 157 ~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h 202 (211)
T COG2910 157 FFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQH 202 (211)
T ss_pred hcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccc
Confidence 888875332 1000 01112345677456678887776443
No 319
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=94.94 E-value=0.037 Score=57.22 Aligned_cols=32 Identities=34% Similarity=0.497 Sum_probs=29.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
+++||||+|.+|+++++.|.++|.+|++++|+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 37999999999999999999999999998884
No 320
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=94.86 E-value=0.25 Score=52.35 Aligned_cols=157 Identities=15% Similarity=0.081 Sum_probs=93.8
Q ss_pred cCchhhHHHHH-hhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCC-HHH
Q 006768 431 HGNTCTAAVIL-NELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTK-YQA 508 (632)
Q Consensus 431 dG~sltaa~~~-~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd-~~~ 508 (632)
+|.|+.-++.. ..+-.+||+|+|.|- |-.||.+|.++...|++|++..-++-++-+.+-+ . . +|.. .++
T Consensus 191 tgqS~~DgI~RaTn~liaGK~vVV~GY-G~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~Md--G-f-----~V~~m~~A 261 (420)
T COG0499 191 TGQSLLDGILRATNVLLAGKNVVVAGY-GWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMD--G-F-----RVMTMEEA 261 (420)
T ss_pred cchhHHHHHHhhhceeecCceEEEecc-cccchHHHHHhhcCCCeEEEEecCchHHHHHhhc--C-c-----EEEEhHHh
Confidence 44555555433 345578999999998 8999999999999999999988877654433221 1 1 1221 122
Q ss_pred HHHHHh--hhc--CCccCccccccCCCCcEEEeec-cCCc-------------cccCCCeEEe---cCCee--eccCccc
Q 006768 509 AQHSKT--WIV--GKWITPREQNWAPPGTHFHQFV-VPPI-------------LHFRRDCTYG---DLAAM--RLPDDVE 565 (632)
Q Consensus 509 ~~~~di--~~~--g~~~~~~d~~~~~~G~vv~d~~-~P~~-------------~~~r~d~~~~---~g~~M--~~P~~~~ 565 (632)
....|+ +.. .+.+..++....++|++++... +-.+ .+.|+.+.-. +|-.+ ...+.+.
T Consensus 262 a~~gDifiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llaeGRLv 341 (420)
T COG0499 262 AKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAEGRLV 341 (420)
T ss_pred hhcCCEEEEccCCcCccCHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEecceee
Confidence 223343 222 2446666777788888887554 3222 1223333222 23333 2345677
Q ss_pred cccccccCCCchhhhHHHHHHHHHhhhccCcc
Q 006768 566 GLGICEYTMDRGVVHACHAGGVVHLLEGWTHH 597 (632)
Q Consensus 566 ~~~s~~~~lp~~v~~ac~a~~il~aLEg~~~~ 597 (632)
|+.. ..+-|..||..+-+...+.+.+=+..+
T Consensus 342 NLa~-a~GHPs~VMd~SFanQaLa~~~L~~n~ 372 (420)
T COG0499 342 NLAA-ATGHPSEVMDMSFANQALAQIYLVKNH 372 (420)
T ss_pred eecc-CCCCcHHHhhhhHHHHHHHHHHHHhcc
Confidence 8765 678899999887666665554444433
No 321
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.80 E-value=0.095 Score=52.87 Aligned_cols=61 Identities=18% Similarity=0.320 Sum_probs=49.3
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH-HcCCCccEEEEeCCCHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK-EAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~-~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++++|.|+ |-+|+.+|+.|.+.|.+|+++.+++++.++..+ ++. +..+..|-+|.+.++++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~--~~~v~gd~t~~~~L~~a 62 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELD--THVVIGDATDEDVLEEA 62 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcc--eEEEEecCCCHHHHHhc
Confidence 46889999 999999999999999999999999999888444 333 44566788887776555
No 322
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.71 E-value=0.058 Score=59.97 Aligned_cols=45 Identities=22% Similarity=0.350 Sum_probs=36.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQKE 491 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~~ 491 (632)
.++|+|+|+|+ |++|.++|+.|+++|++|++++++. +.+++..++
T Consensus 3 ~~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (450)
T PRK14106 3 LKGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEE 48 (450)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH
Confidence 46899999998 6699999999999999999999874 444443333
No 323
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=94.67 E-value=0.062 Score=58.36 Aligned_cols=91 Identities=14% Similarity=0.190 Sum_probs=62.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHH----HHHHhhh--c---
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAA----QHSKTWI--V--- 517 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~----~~~di~~--~--- 517 (632)
.+++|+|.|+ |++|+..++.+.+.|++|++++|+.++++++.+..... ...+..+.+.. +++|+-+ +
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~---v~~~~~~~~~l~~~l~~aDvVI~a~~~~ 241 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGR---IHTRYSNAYEIEDAVKRADLLIGAVLIP 241 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCce---eEeccCCHHHHHHHHccCCEEEEccccC
Confidence 3566999998 89999999999999999999999999988887766542 12334444443 2334411 1
Q ss_pred CCc----cCccccccCCCCcEEEeeccC
Q 006768 518 GKW----ITPREQNWAPPGTHFHQFVVP 541 (632)
Q Consensus 518 g~~----~~~~d~~~~~~G~vv~d~~~P 541 (632)
+.. ++.+....+++|.+++|++..
T Consensus 242 g~~~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 242 GAKAPKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCCCCcCcCHHHHhcCCCCCEEEEEecC
Confidence 211 233334446889999999843
No 324
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.66 E-value=0.12 Score=45.76 Aligned_cols=59 Identities=20% Similarity=0.339 Sum_probs=47.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSK 513 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~d 513 (632)
++|.|. |.+|+.+++.|.+.+.+|+++++++++.+++.++. ......|.+|.+..+++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~---~~~i~gd~~~~~~l~~a~ 59 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG---VEVIYGDATDPEVLERAG 59 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT---SEEEES-TTSHHHHHHTT
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc---cccccccchhhhHHhhcC
Confidence 578898 79999999999997779999999999988887654 456777999988887664
No 325
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=94.61 E-value=0.064 Score=58.54 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=44.1
Q ss_pred CCCCcEEEEecC---------------Cch-HHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH
Q 006768 445 PKDVKEVFLTGA---------------TSK-LGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA 508 (632)
Q Consensus 445 ~~~gk~vlVtGa---------------sgG-IG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~ 508 (632)
+..||+++|||| ||| +|+++|+.++++|++|+++.++.+. ..+.. ...+|+++.++
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~------~~~~~--~~~~~v~~~~~ 253 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSL------LTPPG--VKSIKVSTAEE 253 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCcc------CCCCC--cEEEEeccHHH
Confidence 467999999999 555 9999999999999999998876432 12222 34679988877
Q ss_pred H
Q 006768 509 A 509 (632)
Q Consensus 509 ~ 509 (632)
+
T Consensus 254 ~ 254 (390)
T TIGR00521 254 M 254 (390)
T ss_pred H
Confidence 7
No 326
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=94.43 E-value=0.28 Score=52.37 Aligned_cols=145 Identities=19% Similarity=0.195 Sum_probs=83.7
Q ss_pred cCCceeecccccccccccC-CCceEEeccC--CCccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHH
Q 006768 395 LGVKVLSLAALNKNESLNG-GGTLFVDKHP--NLKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRA 463 (632)
Q Consensus 395 ~g~~v~~LGa~n~~~~l~~-~g~l~~~~~p--~l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~a 463 (632)
.|+|+++.---|..+-+-. .|...+ .++ .....+.||+.+|+ +++.+-+ +.+.+++.|.|+ |..|+.
T Consensus 65 ~g~K~v~~~p~N~~~glp~~~g~i~L-~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~-G~qA~~ 142 (325)
T TIGR02371 65 AGVKCVNVHPGNPDRHLPTVMALIIL-VSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGA-GRQAWT 142 (325)
T ss_pred EEEEEEeecCCchhcCCCcceEEEEE-eeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECC-CHHHHH
Confidence 4666666544443211111 222222 222 24567889999884 2222333 345688999998 899999
Q ss_pred HHHHHHHc--CCcEEEEecCHHHHHHHHHHcCCC-ccEEEEeCCCH-HHHHHHHhh-hcCCccCc-cccccCCCCcEEEe
Q 006768 464 IALYLCRK--RVRVLMLTLSTERFQKIQKEAPID-CQNYLVQVTKY-QAAQHSKTW-IVGKWITP-REQNWAPPGTHFHQ 537 (632)
Q Consensus 464 iA~~La~~--G~~V~l~~R~~e~l~~l~~~i~~~-~~~~~~Dvsd~-~~~~~~di~-~~g~~~~~-~d~~~~~~G~vv~d 537 (632)
.++.++.. ..+|.+.+|+.++.+++++++.+. ..... ..+. +.++++|+- ......+| .+..++++|++++.
T Consensus 143 ~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~--~~~~~eav~~aDiVitaT~s~~P~~~~~~l~~g~~v~~ 220 (325)
T TIGR02371 143 QLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA--ATDPREAVEGCDILVTTTPSRKPVVKADWVSEGTHINA 220 (325)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE--eCCHHHHhccCCEEEEecCCCCcEecHHHcCCCCEEEe
Confidence 87777653 358999999999999988876421 11111 2333 445666651 11111122 23445899999887
Q ss_pred ec--cCCc
Q 006768 538 FV--VPPI 543 (632)
Q Consensus 538 ~~--~P~~ 543 (632)
+. .|.+
T Consensus 221 vGs~~p~~ 228 (325)
T TIGR02371 221 IGADAPGK 228 (325)
T ss_pred cCCCCccc
Confidence 76 4543
No 327
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=94.42 E-value=0.076 Score=62.21 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=43.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRK-RVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQ 507 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~-G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~ 507 (632)
.+++|+||||+|-||+.++++|.++ |.+|+.++|+......... ........+|++|.+
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~--~~~~~~~~gDl~d~~ 373 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG--HPRFHFVEGDISIHS 373 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC--CCceEEEeccccCcH
Confidence 4789999999999999999999986 6899999987654332211 123445567887643
No 328
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.36 E-value=0.14 Score=48.85 Aligned_cols=79 Identities=24% Similarity=0.358 Sum_probs=47.7
Q ss_pred hhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcCCcc
Q 006768 442 NELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVGKWI 521 (632)
Q Consensus 442 ~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g~~~ 521 (632)
.+++.+||+|+|.|.|.-+|+.++..|.++|+.|+++..+.+.+++..++. + ... +.+|..
T Consensus 30 ~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~~A--D--IVV--------------sa~G~~- 90 (160)
T PF02882_consen 30 YGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITRRA--D--IVV--------------SAVGKP- 90 (160)
T ss_dssp TT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHTTS--S--EEE--------------E-SSST-
T ss_pred cCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceeeec--c--EEe--------------eeeccc-
Confidence 356789999999999989999999999999999999877655555443321 1 111 122221
Q ss_pred CccccccCCCCcEEEeec
Q 006768 522 TPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 522 ~~~d~~~~~~G~vv~d~~ 539 (632)
......++++|++++|+.
T Consensus 91 ~~i~~~~ik~gavVIDvG 108 (160)
T PF02882_consen 91 NLIKADWIKPGAVVIDVG 108 (160)
T ss_dssp T-B-GGGS-TTEEEEE--
T ss_pred cccccccccCCcEEEecC
Confidence 111233589999999988
No 329
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=94.35 E-value=0.055 Score=56.43 Aligned_cols=60 Identities=18% Similarity=0.130 Sum_probs=43.3
Q ss_pred EEecCCchHHHHHHHHHHHcC--CcEEEEecCHHHHH-HHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 452 FLTGATSKLGRAIALYLCRKR--VRVLMLTLSTERFQ-KIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 452 lVtGasgGIG~aiA~~La~~G--~~V~l~~R~~e~l~-~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+||||+|=+|+.++++|.++| .+|.+.+|+..... +.....+ ......+|++|.+++.++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~-~~~~~~~Di~d~~~l~~a 63 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSG-VKEYIQGDITDPESLEEA 63 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhccc-ceeEEEeccccHHHHHHH
Confidence 589999999999999999999 68888887654321 1112222 122678899999888655
No 330
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=94.33 E-value=0.12 Score=53.32 Aligned_cols=142 Identities=16% Similarity=0.113 Sum_probs=82.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH-HHHHHHHcCCCccEEEEeCCCH-HHHHHHHh--hhcC--C
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTER-FQKIQKEAPIDCQNYLVQVTKY-QAAQHSKT--WIVG--K 519 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~-l~~l~~~i~~~~~~~~~Dvsd~-~~~~~~di--~~~g--~ 519 (632)
.+||+++|.|- |.+|+.+|.+|-..|++|++...++-. +++..+-. .|+.. +.++..|+ +..| +
T Consensus 212 ~aGKv~Vv~GY-GdVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~---------~V~tm~ea~~e~difVTtTGc~d 281 (434)
T KOG1370|consen 212 IAGKVAVVCGY-GDVGKGCAQALKGFGARVIVTEIDPICALQAAMEGY---------EVTTLEEAIREVDIFVTTTGCKD 281 (434)
T ss_pred ecccEEEEecc-CccchhHHHHHhhcCcEEEEeccCchHHHHHHhhcc---------EeeeHHHhhhcCCEEEEccCCcc
Confidence 46999999998 899999999999999999998777643 33322222 12222 22333333 1111 2
Q ss_pred ccCccccccCCCCcEEEeec-cCCc-------------ccc--CCC-eEEecCCee--eccCccccccccccCCCchhhh
Q 006768 520 WITPREQNWAPPGTHFHQFV-VPPI-------------LHF--RRD-CTYGDLAAM--RLPDDVEGLGICEYTMDRGVVH 580 (632)
Q Consensus 520 ~~~~~d~~~~~~G~vv~d~~-~P~~-------------~~~--r~d-~~~~~g~~M--~~P~~~~~~~s~~~~lp~~v~~ 580 (632)
.+..+.....+.++++|... +-.+ ... +-| ...-+|..+ ...+.+.|+ +|..+.|.-+++
T Consensus 282 ii~~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL-~CatghpSFvmS 360 (434)
T KOG1370|consen 282 IITGEHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNL-GCATGHPSFVMS 360 (434)
T ss_pred hhhHHHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeec-ccccCCCceEEe
Confidence 23333344455666665443 2211 000 111 111122222 335667776 478889988888
Q ss_pred HHHHHHHHHhhhccCccc
Q 006768 581 ACHAGGVVHLLEGWTHHE 598 (632)
Q Consensus 581 ac~a~~il~aLEg~~~~e 598 (632)
......++..+|=|++.+
T Consensus 361 ~sftnQvlAqIeLwt~p~ 378 (434)
T KOG1370|consen 361 NSFTNQVLAQIELWTAPE 378 (434)
T ss_pred cchHHHHHHHHHHhcCCC
Confidence 876777777788888774
No 331
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.28 E-value=0.089 Score=51.16 Aligned_cols=43 Identities=28% Similarity=0.430 Sum_probs=36.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
+|.|.|| |-+|+++|..++..|.+|.+++++++.+++..+++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 4789999 999999999999999999999999998877766553
No 332
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=94.26 E-value=0.12 Score=56.72 Aligned_cols=59 Identities=12% Similarity=0.098 Sum_probs=47.7
Q ss_pred cCchhhHHHHHh-hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 431 HGNTCTAAVILN-ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 431 dG~sltaa~~~~-~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
+|.|...++... ++...|++|+|.|+ |.||+.+|..+...|++|+++++++.+++...+
T Consensus 184 ~g~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~ 243 (413)
T cd00401 184 CRESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAM 243 (413)
T ss_pred hchhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh
Confidence 466665555443 45578999999999 999999999999999999999999888776543
No 333
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=94.26 E-value=0.1 Score=61.15 Aligned_cols=64 Identities=13% Similarity=0.232 Sum_probs=45.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHc--CCcEEEEecCH--HHHHHHHHH-cCCCccEEEEeCCCHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRK--RVRVLMLTLST--ERFQKIQKE-APIDCQNYLVQVTKYQAAQ 510 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~--G~~V~l~~R~~--e~l~~l~~~-i~~~~~~~~~Dvsd~~~~~ 510 (632)
++|+|+||||+|-||+.+++.|.++ |.+|+.++|.. ++.+.+... ....+....+|++|.+.++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~ 73 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVN 73 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHH
Confidence 4689999999999999999999998 56888887642 233333221 1224556677998877654
No 334
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=94.24 E-value=0.29 Score=51.04 Aligned_cols=101 Identities=13% Similarity=0.187 Sum_probs=66.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC-----------CccEEEEeCCCHHHHHHHHhhhcC
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI-----------DCQNYLVQVTKYQAAQHSKTWIVG 518 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~-----------~~~~~~~Dvsd~~~~~~~di~~~g 518 (632)
+|.+.|- |-.|..+|..|.++|.+|.+.+|++++..+...+.+. ++..+..=+.|.++++++ ..|
T Consensus 2 kIafIGL-G~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V---~~g 77 (286)
T COG2084 2 KIAFIGL-GIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAV---LFG 77 (286)
T ss_pred eEEEEcC-chhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHH---HhC
Confidence 4677887 8999999999999999999999999995555444322 223333345566666444 111
Q ss_pred -CccCccccccCCCCcEEEeec-cCCc-------cccCCCeEEecCCee
Q 006768 519 -KWITPREQNWAPPGTHFHQFV-VPPI-------LHFRRDCTYGDLAAM 558 (632)
Q Consensus 519 -~~~~~~d~~~~~~G~vv~d~~-~P~~-------~~~r~d~~~~~g~~M 558 (632)
+.+ ...+++|++++|.+ ..++ .....++.+.+.|.+
T Consensus 78 ~~g~----~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVs 122 (286)
T COG2084 78 ENGL----LEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVS 122 (286)
T ss_pred ccch----hhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCcc
Confidence 111 12368999999999 5555 112267788886655
No 335
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=94.24 E-value=0.15 Score=54.45 Aligned_cols=48 Identities=23% Similarity=0.276 Sum_probs=39.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPID 495 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~ 495 (632)
.|++|+|+||+||+|....+.....|++++++..++++.+ .+++++.+
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd 189 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGAD 189 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCC
Confidence 4899999999999999888777778877777777778877 66777653
No 336
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=94.18 E-value=0.11 Score=54.08 Aligned_cols=61 Identities=13% Similarity=0.113 Sum_probs=44.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+|+||||+|=||.-++..|.++|.+|++++.-...-.+...... ...++.|+.|.+.+++.
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~--~~f~~gDi~D~~~L~~v 62 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--FKFYEGDLLDRALLTAV 62 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc--CceEEeccccHHHHHHH
Confidence 68999999999999999999999999998764322222222211 45778899887766443
No 337
>PLN00016 RNA-binding protein; Provisional
Probab=94.15 E-value=0.057 Score=58.63 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=35.1
Q ss_pred CCCcEEEEe----cCCchHHHHHHHHHHHcCCcEEEEecCHHH
Q 006768 446 KDVKEVFLT----GATSKLGRAIALYLCRKRVRVLMLTLSTER 484 (632)
Q Consensus 446 ~~gk~vlVt----GasgGIG~aiA~~La~~G~~V~l~~R~~e~ 484 (632)
...++|+|| ||+|-||+.+++.|.++|.+|+++.|+.+.
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 445789999 999999999999999999999999998654
No 338
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.83 E-value=0.3 Score=51.26 Aligned_cols=77 Identities=12% Similarity=0.227 Sum_probs=53.9
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEe-cCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcCCcc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLT-LSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVGKWI 521 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~-R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g~~~ 521 (632)
+++..||+|+|.|.++-+|+.+|..|.++|++|+++. |+.+ ++++.++ +..+.+-+.+.+.+
T Consensus 153 ~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~~----ADIVIsavg~~~~v------------ 215 (296)
T PRK14188 153 HGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCRR----ADILVAAVGRPEMV------------ 215 (296)
T ss_pred CCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHhc----CCEEEEecCChhhc------------
Confidence 5678999999999999999999999999999999994 6643 3333322 22232233333222
Q ss_pred CccccccCCCCcEEEeec
Q 006768 522 TPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 522 ~~~d~~~~~~G~vv~d~~ 539 (632)
+...+++|++++|+.
T Consensus 216 ---~~~~lk~GavVIDvG 230 (296)
T PRK14188 216 ---KGDWIKPGATVIDVG 230 (296)
T ss_pred ---chheecCCCEEEEcC
Confidence 222378999999988
No 339
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=93.82 E-value=0.29 Score=51.66 Aligned_cols=115 Identities=13% Similarity=0.072 Sum_probs=75.2
Q ss_pred ccceecCchhhH-------HHHHhhCCCCCcEEEEecCCchHHHHHHHHHHHc-C-CcEEEEecCHHHHHHHHHHcCCCc
Q 006768 426 KVRVVHGNTCTA-------AVILNELPKDVKEVFLTGATSKLGRAIALYLCRK-R-VRVLMLTLSTERFQKIQKEAPIDC 496 (632)
Q Consensus 426 ~v~vtdG~slta-------a~~~~~i~~~gk~vlVtGasgGIG~aiA~~La~~-G-~~V~l~~R~~e~l~~l~~~i~~~~ 496 (632)
...+.||+.+|+ +++.+-...+.+++.|.|+ |..|+..++.++.- . .+|.+.+|+.++.+++++++..+.
T Consensus 88 p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~ 166 (301)
T PRK06407 88 LVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEF 166 (301)
T ss_pred EEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhc
Confidence 456789988884 3333444567799999998 99999999998873 4 389999999999999988876432
Q ss_pred --cEEEEeCCCH-HHHHHHHh-hhcCCccCc-cccccCCCCcEEEeec--cCCc
Q 006768 497 --QNYLVQVTKY-QAAQHSKT-WIVGKWITP-REQNWAPPGTHFHQFV--VPPI 543 (632)
Q Consensus 497 --~~~~~Dvsd~-~~~~~~di-~~~g~~~~~-~d~~~~~~G~vv~d~~--~P~~ 543 (632)
.... +.+. +.++++|+ .......+| .+..++++|+++..+- .|.+
T Consensus 167 ~~~v~~--~~~~~eav~~aDIV~taT~s~~P~~~~~~l~pg~hV~aiGs~~p~~ 218 (301)
T PRK06407 167 GVDIRP--VDNAEAALRDADTITSITNSDTPIFNRKYLGDEYHVNLAGSNYPNR 218 (301)
T ss_pred CCcEEE--eCCHHHHHhcCCEEEEecCCCCcEecHHHcCCCceEEecCCCCCCc
Confidence 1221 2344 34566675 111111122 2344688998888765 4544
No 340
>PRK06823 ornithine cyclodeaminase; Validated
Probab=93.80 E-value=0.48 Score=50.35 Aligned_cols=115 Identities=16% Similarity=0.142 Sum_probs=73.6
Q ss_pred cccee-cCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHHHHHHHHHcC--CcEEEEecCHHHHHHHHHHcCC
Q 006768 426 KVRVV-HGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAIALYLCRKR--VRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 426 ~v~vt-dG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~aiA~~La~~G--~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
...+. ||+.+|+ ++..+-+ +.+.+++.|.|+ |..|+..++.++.-- .+|.+.+|+.++.+++++++..
T Consensus 97 p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~ 175 (315)
T PRK06823 97 PQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQA 175 (315)
T ss_pred eEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh
Confidence 34554 9998884 2223333 456789999998 999999999988643 4899999999999998877643
Q ss_pred C-ccEEEEeCCCH-HHHHHHHhh-hcCCccCc-cccccCCCCcEEEeec--cCCc
Q 006768 495 D-CQNYLVQVTKY-QAAQHSKTW-IVGKWITP-REQNWAPPGTHFHQFV--VPPI 543 (632)
Q Consensus 495 ~-~~~~~~Dvsd~-~~~~~~di~-~~g~~~~~-~d~~~~~~G~vv~d~~--~P~~ 543 (632)
. ..... +.+. +.++.+|+- ......+| .+..++++|+++..+. .|.+
T Consensus 176 ~~~~v~~--~~~~~~av~~ADIV~taT~s~~P~~~~~~l~~G~hi~~iGs~~p~~ 228 (315)
T PRK06823 176 LGFAVNT--TLDAAEVAHAANLIVTTTPSREPLLQAEDIQPGTHITAVGADSPGK 228 (315)
T ss_pred cCCcEEE--ECCHHHHhcCCCEEEEecCCCCceeCHHHcCCCcEEEecCCCCccc
Confidence 1 22221 2343 445666751 11111122 2345689999988776 5544
No 341
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=93.80 E-value=0.23 Score=52.70 Aligned_cols=146 Identities=21% Similarity=0.204 Sum_probs=79.7
Q ss_pred HcCCceeecccccccccccC-CCceEEeccC--CCccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHH
Q 006768 394 RLGVKVLSLAALNKNESLNG-GGTLFVDKHP--NLKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGR 462 (632)
Q Consensus 394 ~~g~~v~~LGa~n~~~~l~~-~g~l~~~~~p--~l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~ 462 (632)
..|+|+++.---|...-+.. .|. ..-.++ .....+.||+.+|+ +++.+-+ +.+.+++.|.|+ |..|+
T Consensus 64 ~~gvK~v~~~p~N~~~glP~~~g~-i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGa-G~QA~ 141 (313)
T PF02423_consen 64 VAGVKWVSVFPGNPKRGLPSIQGV-ILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGA-GVQAR 141 (313)
T ss_dssp EEEEEEEEEETTCGGGTSSSEEEE-EEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE---SHHHH
T ss_pred EEEEEEEEecCCccccCCCceeEE-EEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECC-CHHHH
Confidence 34777777554454222221 222 222222 34467899999984 2222322 456689999998 99999
Q ss_pred HHHHHHHH-cCC-cEEEEecCHHHHHHHHHHcCC-CccEEEEeCCCH-HHHHHHHh----hhcCCccCccccccCCCCcE
Q 006768 463 AIALYLCR-KRV-RVLMLTLSTERFQKIQKEAPI-DCQNYLVQVTKY-QAAQHSKT----WIVGKWITPREQNWAPPGTH 534 (632)
Q Consensus 463 aiA~~La~-~G~-~V~l~~R~~e~l~~l~~~i~~-~~~~~~~Dvsd~-~~~~~~di----~~~g~~~~~~d~~~~~~G~v 534 (632)
..++.++. ++. +|.+.+|++++.+++++++.. ..... .+.|. ++++++|+ +.......-.+..++++|++
T Consensus 142 ~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~--~~~~~~~av~~aDii~taT~s~~~~P~~~~~~l~~g~h 219 (313)
T PF02423_consen 142 WHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVV--AVDSAEEAVRGADIIVTATPSTTPAPVFDAEWLKPGTH 219 (313)
T ss_dssp HHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEE--EESSHHHHHTTSSEEEE----SSEEESB-GGGS-TT-E
T ss_pred HHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccce--eccchhhhcccCCEEEEccCCCCCCccccHHHcCCCcE
Confidence 99999887 444 899999999999999998865 22222 23344 44566665 11112001124456999999
Q ss_pred EEeec--cCCc
Q 006768 535 FHQFV--VPPI 543 (632)
Q Consensus 535 v~d~~--~P~~ 543 (632)
+..+. .|.+
T Consensus 220 i~~iGs~~~~~ 230 (313)
T PF02423_consen 220 INAIGSYTPGM 230 (313)
T ss_dssp EEE-S-SSTTB
T ss_pred EEEecCCCCch
Confidence 98777 5654
No 342
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=93.64 E-value=0.15 Score=51.17 Aligned_cols=42 Identities=17% Similarity=0.351 Sum_probs=37.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++.|+|++|.+|.++|..|++.|.+|.+.+|++++++++.++
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 478999779999999999999999999999999998887664
No 343
>PLN02206 UDP-glucuronate decarboxylase
Probab=93.53 E-value=0.093 Score=58.42 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=32.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
.++++|+||||+|-||+.+++.|.++|.+|++++|.
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~ 152 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNF 152 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCC
Confidence 567899999999999999999999999999988764
No 344
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=93.51 E-value=0.23 Score=52.81 Aligned_cols=49 Identities=18% Similarity=0.221 Sum_probs=42.6
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|++++|+||+|++|.++++.+...|++|+.+++++++.+.++++++.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa 198 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF 198 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Confidence 5689999999999999999988888899999999999998888765654
No 345
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=93.51 E-value=0.054 Score=55.85 Aligned_cols=35 Identities=31% Similarity=0.407 Sum_probs=31.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERF 485 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l 485 (632)
|+||||+|-||+.+++.|+++|.+|+.++|+.++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 35 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG 35 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence 58999999999999999999999999999986543
No 346
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=93.43 E-value=0.25 Score=53.00 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=42.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|++|+|+||+|++|.+.++.....|++|+.+++++++.+.++++++.
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa 205 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 205 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC
Confidence 5689999999999999999888888899999889999998887766664
No 347
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=93.38 E-value=0.15 Score=49.33 Aligned_cols=58 Identities=19% Similarity=0.378 Sum_probs=40.1
Q ss_pred HHHHHhhhcccceeeccccccccccchh--hhccCcccccccccC-CCCCcccCchhhhhhcCCCC
Q 006768 209 MFDFLRCLGHCNVEIIPHRWFETFPFLR--YLLYTPTYHSLHHTE-KDSNFCLFMPLFDALGNTLN 271 (632)
Q Consensus 209 ~~~~~~~~~H~~~~~~p~~~~~~~p~l~--~l~~tp~~H~lHH~~-~~~Nyg~~~~~wD~lfGT~~ 271 (632)
+.....-..|..... |.+.. +|. .++.+|..|..||.. +++|||....+|+.+....+
T Consensus 97 ~tnq~HkWsH~~~~~-P~~V~----~LQ~~gillsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~~~ 157 (178)
T PF10520_consen 97 FTNQFHKWSHTYKSL-PPWVR----FLQDAGILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDKIR 157 (178)
T ss_pred HHHHHHHHHcCCCCC-CHHHH----HHHHCCcccCchhhhccccCcccCCeEeecccchHHHHHhh
Confidence 333344556876553 54321 121 156699999999998 79999999999999876553
No 348
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.30 E-value=0.098 Score=58.11 Aligned_cols=36 Identities=25% Similarity=0.191 Sum_probs=32.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST 482 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~ 482 (632)
..+|+++|||+ |++|+++|+.|+++|++|++.+++.
T Consensus 3 ~~~k~v~v~G~-g~~G~s~a~~l~~~G~~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGL-AKSGYAAAKLLHKLGANVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 46899999999 5699999999999999999998764
No 349
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=93.27 E-value=0.11 Score=54.44 Aligned_cols=31 Identities=19% Similarity=0.364 Sum_probs=28.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
+|+||||+|=||+.+++.|.++| +|+.++|.
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~ 32 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVH 32 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccc
Confidence 69999999999999999999999 78877764
No 350
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.25 E-value=0.18 Score=47.83 Aligned_cols=41 Identities=22% Similarity=0.359 Sum_probs=37.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
+|.|.|| |..|.|+|..|+++|.+|.+.+|+++..+++.+.
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~ 41 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINET 41 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 4789999 9999999999999999999999999998888765
No 351
>PRK07201 short chain dehydrogenase; Provisional
Probab=93.20 E-value=0.23 Score=57.89 Aligned_cols=56 Identities=21% Similarity=0.273 Sum_probs=41.7
Q ss_pred EEEEecCCchHHHHHHHHHH--HcCCcEEEEecCH--HHHHHHHHHcC-CCccEEEEeCCC
Q 006768 450 EVFLTGATSKLGRAIALYLC--RKRVRVLMLTLST--ERFQKIQKEAP-IDCQNYLVQVTK 505 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La--~~G~~V~l~~R~~--e~l~~l~~~i~-~~~~~~~~Dvsd 505 (632)
+|+||||||-||+.+++.|. ++|.+|.+++|+. ++++++..... .++.....|++|
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~ 62 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTE 62 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCC
Confidence 59999999999999999999 5789999999964 33444433332 345556668776
No 352
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=93.12 E-value=0.14 Score=54.40 Aligned_cols=69 Identities=13% Similarity=0.254 Sum_probs=50.8
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCC--cEEEEecCHHHHHHHHHHcCCCc---cEEEEeCCCHHHHHHHHh
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRV--RVLMLTLSTERFQKIQKEAPIDC---QNYLVQVTKYQAAQHSKT 514 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~--~V~l~~R~~e~l~~l~~~i~~~~---~~~~~Dvsd~~~~~~~di 514 (632)
.+.+++|.|+|| |++|.++|..|+..|. ++.++++++++++..+.++..-. ....+-.+++++++++|+
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adi 76 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADL 76 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCE
Confidence 356789999998 9999999999999996 79999999888777766654211 111222346777777765
No 353
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.07 E-value=0.32 Score=50.68 Aligned_cols=77 Identities=19% Similarity=0.275 Sum_probs=54.6
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCC-
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGK- 519 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~- 519 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|+.|+++......+++..++ +|+ ..+|.
T Consensus 153 ~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~--------------------ADIvI~AvG~p 212 (284)
T PRK14190 153 NIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQ--------------------ADILIVAVGKP 212 (284)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHh--------------------CCEEEEecCCC
Confidence 5678999999999999999999999999999999986544434433332 222 11221
Q ss_pred -ccCccccccCCCCcEEEeeccCC
Q 006768 520 -WITPREQNWAPPGTHFHQFVVPP 542 (632)
Q Consensus 520 -~~~~~d~~~~~~G~vv~d~~~P~ 542 (632)
.+.+ .++++|++++|+....
T Consensus 213 ~~i~~---~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 213 KLITA---DMVKEGAVVIDVGVNR 233 (284)
T ss_pred CcCCH---HHcCCCCEEEEeeccc
Confidence 2233 3479999999998443
No 354
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.00 E-value=0.15 Score=53.06 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=53.3
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|+.|+++.+....+++..+ ++|+ ..+|..
T Consensus 150 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~--------------------~ADIvIsAvGkp 209 (287)
T PRK14173 150 GIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTR--------------------RADVLVVAVGRP 209 (287)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEecCCc
Confidence 567889999999999999999999999999999988654333333222 2332 222321
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
......++++|++++|+.
T Consensus 210 -~~i~~~~vk~GavVIDVG 227 (287)
T PRK14173 210 -HLITPEMVRPGAVVVDVG 227 (287)
T ss_pred -CccCHHHcCCCCEEEEcc
Confidence 111233489999999998
No 355
>PRK06199 ornithine cyclodeaminase; Validated
Probab=93.00 E-value=0.56 Score=51.14 Aligned_cols=142 Identities=18% Similarity=0.185 Sum_probs=83.8
Q ss_pred cCCceeecccccccccccCCCceEEeccC--CCccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHHH
Q 006768 395 LGVKVLSLAALNKNESLNGGGTLFVDKHP--NLKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAI 464 (632)
Q Consensus 395 ~g~~v~~LGa~n~~~~l~~~g~l~~~~~p--~l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~ai 464 (632)
.|+|+++.---|...-+....++..-.++ .....+.||+.+|+ +++.+-+ +.+-+++.|.|+ |..|+..
T Consensus 92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~-G~QA~~~ 170 (379)
T PRK06199 92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGP-GVMGKTI 170 (379)
T ss_pred eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECC-cHHHHHH
Confidence 35666664444442212222223322222 34567889999884 2333334 456789999998 9999999
Q ss_pred HHHHHH-c-C-CcEEEEecCHHHHHHHHHHcCCCcc-EEEEe-CCCH-HHHHHHHhhh--cCCcc-----Cc-cccccCC
Q 006768 465 ALYLCR-K-R-VRVLMLTLSTERFQKIQKEAPIDCQ-NYLVQ-VTKY-QAAQHSKTWI--VGKWI-----TP-REQNWAP 530 (632)
Q Consensus 465 A~~La~-~-G-~~V~l~~R~~e~l~~l~~~i~~~~~-~~~~D-vsd~-~~~~~~di~~--~g~~~-----~~-~d~~~~~ 530 (632)
++.+++ + . .+|.+.+|++++++++++++..... ...+. +.+. +.++++|+-. ..... .| .+..+++
T Consensus 171 l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~~lk 250 (379)
T PRK06199 171 LAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKREWVK 250 (379)
T ss_pred HHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHHHcC
Confidence 999987 3 3 4899999999999999888764321 11111 3444 3456677511 11100 12 2345688
Q ss_pred CCcEEEe
Q 006768 531 PGTHFHQ 537 (632)
Q Consensus 531 ~G~vv~d 537 (632)
+|+++.-
T Consensus 251 pG~hv~~ 257 (379)
T PRK06199 251 PGAFLLM 257 (379)
T ss_pred CCcEEec
Confidence 9998764
No 356
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=92.95 E-value=0.11 Score=54.79 Aligned_cols=65 Identities=12% Similarity=0.267 Sum_probs=46.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcC--CcEEEEecCHHHHHHHHHHcCCCc----cEEEEeCCCHHHHHHHHh
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKR--VRVLMLTLSTERFQKIQKEAPIDC----QNYLVQVTKYQAAQHSKT 514 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G--~~V~l~~R~~e~l~~l~~~i~~~~----~~~~~Dvsd~~~~~~~di 514 (632)
++|.|.|+ |++|+++|..|+..| .+|++++|++++++.++.++.... ........+.++++++|+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDI 71 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADI 71 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCE
Confidence 36899998 999999999999999 379999999998887777653211 111222345566666654
No 357
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=92.89 E-value=0.57 Score=57.08 Aligned_cols=64 Identities=17% Similarity=0.309 Sum_probs=52.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcC-Cc-------------EEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKR-VR-------------VLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G-~~-------------V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~ 511 (632)
...|+|+|.|| |.+|+.+|+.|++.. ++ |++++++.+++++++++.+ .+....+|++|.+++.+
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-~~~~v~lDv~D~e~L~~ 644 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-NAEAVQLDVSDSESLLK 644 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-CCceEEeecCCHHHHHH
Confidence 45789999998 999999999999864 34 8889999999999988763 34567889999888754
No 358
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=92.88 E-value=0.58 Score=49.16 Aligned_cols=41 Identities=10% Similarity=0.301 Sum_probs=36.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++.+.|. |.+|.++|..|+++|.+|.+.+|++++.+++.++
T Consensus 3 ~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~ 43 (296)
T PRK15461 3 AIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK 43 (296)
T ss_pred eEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc
Confidence 5788897 8999999999999999999999999998887654
No 359
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=92.76 E-value=0.23 Score=40.88 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=22.6
Q ss_pred CCcEEEEecCCchHHHHHHHHHH-HcCCcEEEEecC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLC-RKRVRVLMLTLS 481 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La-~~G~~V~l~~R~ 481 (632)
..|+|+|+|+|+|.|.|....++ ..|++.+-+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE 73 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE 73 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred CCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence 34999999999999999665555 567776665543
No 360
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=92.72 E-value=0.23 Score=52.07 Aligned_cols=76 Identities=17% Similarity=0.288 Sum_probs=53.7
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|++|+++......+++..+ ++|+ ..+|..
T Consensus 162 ~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~--------------------~ADIvv~AvGk~ 221 (299)
T PLN02516 162 GIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVR--------------------EADIVIAAAGQA 221 (299)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEcCCCc
Confidence 677899999999999999999999999999999998654333333322 2232 222321
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
......++++|++++|+.
T Consensus 222 -~~i~~~~vk~gavVIDvG 239 (299)
T PLN02516 222 -MMIKGDWIKPGAAVIDVG 239 (299)
T ss_pred -CccCHHHcCCCCEEEEee
Confidence 111234589999999988
No 361
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=92.70 E-value=0.18 Score=53.37 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=73.1
Q ss_pred EEEEecCCchHHHHHHHHHHH----cCCcEEEEecCHHHHHHHHHHcCC-------CccEEEEeCCCHHHHHHH----Hh
Q 006768 450 EVFLTGATSKLGRAIALYLCR----KRVRVLMLTLSTERFQKIQKEAPI-------DCQNYLVQVTKYQAAQHS----KT 514 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~----~G~~V~l~~R~~e~l~~l~~~i~~-------~~~~~~~Dvsd~~~~~~~----di 514 (632)
.++|-||||=-|.-+.+++.. .|.++.+++||++|+++..+++.+ +.....+|++|++++.+. .+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 478999998899999999988 788999999999999998887642 223667899999988554 11
Q ss_pred --hhcCCcc---CccccccCCCCcEEEeec-cCCc----------cccCCCeEEec
Q 006768 515 --WIVGKWI---TPREQNWAPPGTHFHQFV-VPPI----------LHFRRDCTYGD 554 (632)
Q Consensus 515 --~~~g~~~---~~~d~~~~~~G~vv~d~~-~P~~----------~~~r~d~~~~~ 554 (632)
.-+|... ++.-..-+..|+...|++ -|.- .+.++++-+++
T Consensus 87 ivN~vGPyR~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVs 142 (423)
T KOG2733|consen 87 IVNCVGPYRFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVS 142 (423)
T ss_pred EEeccccceecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEe
Confidence 3334332 111122245789999999 5542 22336776665
No 362
>PRK07589 ornithine cyclodeaminase; Validated
Probab=92.62 E-value=1.1 Score=48.15 Aligned_cols=116 Identities=15% Similarity=0.099 Sum_probs=74.9
Q ss_pred CccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHHHHHHHHHc-C-CcEEEEecCHHHHHHHHHHcCC
Q 006768 425 LKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAIALYLCRK-R-VRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 425 l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~aiA~~La~~-G-~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
....+.||+.+|+ ++..+-+ +.+-+++.|.|+ |..|+..++.++.- . .+|.+.+|+.++.+++++++.+
T Consensus 98 ~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~ 176 (346)
T PRK07589 98 YPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAG 176 (346)
T ss_pred CEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 4467889999884 2233333 356788999998 89999998888763 3 4899999999999999988764
Q ss_pred C-ccEEEEeCCCH-HHHHHHHhhh-cCCccC--c-cccccCCCCcEEEeec--cCCc
Q 006768 495 D-CQNYLVQVTKY-QAAQHSKTWI-VGKWIT--P-REQNWAPPGTHFHQFV--VPPI 543 (632)
Q Consensus 495 ~-~~~~~~Dvsd~-~~~~~~di~~-~g~~~~--~-~d~~~~~~G~vv~d~~--~P~~ 543 (632)
. +.... +.+. +.++++|+-. .....+ | .+..++++|+++.-+. .|.+
T Consensus 177 ~~~~v~~--~~~~~~av~~ADIIvtaT~S~~~~Pvl~~~~lkpG~hV~aIGs~~p~~ 231 (346)
T PRK07589 177 PGLRIVA--CRSVAEAVEGADIITTVTADKTNATILTDDMVEPGMHINAVGGDCPGK 231 (346)
T ss_pred cCCcEEE--eCCHHHHHhcCCEEEEecCCCCCCceecHHHcCCCcEEEecCCCCCCc
Confidence 2 22222 2344 3456667511 111111 1 2345689999988765 5544
No 363
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.61 E-value=0.37 Score=50.23 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=34.4
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEe
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLT 479 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~ 479 (632)
+++..||++++.|.|+=+|+.+|..|.++|++|+++.
T Consensus 153 ~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~ 189 (284)
T PRK14179 153 NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH 189 (284)
T ss_pred CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence 6678999999999999999999999999999999873
No 364
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=92.59 E-value=0.22 Score=46.33 Aligned_cols=39 Identities=23% Similarity=0.428 Sum_probs=35.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++|.|+ |++|..+|..|++.|.+|.+++|++ +++++.++
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~ 39 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQ 39 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHH
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhhe
Confidence 578898 9999999999999999999999998 88887655
No 365
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.58 E-value=0.38 Score=49.96 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=41.0
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
+++..||+|+|.|.+.-+|+.+|..|..+|++|+++.++...+++..+
T Consensus 147 ~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~ 194 (279)
T PRK14178 147 KISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELR 194 (279)
T ss_pred CCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHh
Confidence 567889999999999899999999999999999999887665554444
No 366
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=92.56 E-value=0.21 Score=49.60 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=37.7
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQK 490 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~ 490 (632)
..+||+|+|.|| |.+|...|+.|.+.|++|++++++. ++++++.+
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~ 52 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVE 52 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh
Confidence 368999999999 9999999999999999999998764 34555544
No 367
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=92.45 E-value=0.3 Score=56.02 Aligned_cols=62 Identities=13% Similarity=0.250 Sum_probs=52.2
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSK 513 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~d 513 (632)
...++|.|+ |.+|+.+|+.|.++|.+++++++|+++.+++.++ ....+..|.+|.+..+++.
T Consensus 417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~---g~~~i~GD~~~~~~L~~a~ 478 (558)
T PRK10669 417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRER---GIRAVLGNAANEEIMQLAH 478 (558)
T ss_pred CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC---CCeEEEcCCCCHHHHHhcC
Confidence 356899998 9999999999999999999999999999888652 3557778999988776653
No 368
>PLN02778 3,5-epimerase/4-reductase
Probab=92.44 E-value=0.17 Score=53.07 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=30.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
..++++||||+|=||+.++++|.++|.+|+...++
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~ 42 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGR 42 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCc
Confidence 35789999999999999999999999998765443
No 369
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.20 E-value=0.23 Score=52.02 Aligned_cols=76 Identities=16% Similarity=0.211 Sum_probs=53.3
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|++|+++......+++..+ ++|+ +.+|..
T Consensus 153 ~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~--------------------~ADIvIsAvGkp 212 (297)
T PRK14186 153 QIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITR--------------------EADILVAAAGRP 212 (297)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEccCCc
Confidence 567889999999999999999999999999999988543333333322 2332 223321
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
......++++|++++|+.
T Consensus 213 -~~i~~~~ik~gavVIDvG 230 (297)
T PRK14186 213 -NLIGAEMVKPGAVVVDVG 230 (297)
T ss_pred -CccCHHHcCCCCEEEEec
Confidence 111233489999999988
No 370
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.17 E-value=0.35 Score=50.20 Aligned_cols=78 Identities=15% Similarity=0.244 Sum_probs=54.3
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|++|+++......+++..+ ++|+ ..+|..
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~--------------------~ADIvIsAvGkp 212 (278)
T PRK14172 153 NIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCK--------------------KADILVVAIGRP 212 (278)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEcCCCc
Confidence 567899999999999999999999999999999998654333333322 2332 223321
Q ss_pred cCccccccCCCCcEEEeec-cC
Q 006768 521 ITPREQNWAPPGTHFHQFV-VP 541 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~-~P 541 (632)
- .....++++|++++|+. .+
T Consensus 213 ~-~i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 213 K-FIDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred C-ccCHHHcCCCcEEEEeeccc
Confidence 1 11233489999999987 44
No 371
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=92.17 E-value=0.2 Score=55.71 Aligned_cols=36 Identities=14% Similarity=0.205 Sum_probs=32.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
...++|+||||+|-||+.+++.|.++|.+|++++|.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 556789999999999999999999999999998874
No 372
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=92.15 E-value=0.41 Score=50.44 Aligned_cols=48 Identities=19% Similarity=0.201 Sum_probs=40.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|.+|+|+||+|++|.++++.....|++|+.+++++++.+.+ ++++.
T Consensus 137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa 184 (325)
T TIGR02825 137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGF 184 (325)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC
Confidence 4688999999999999999888778899999999998888777 45654
No 373
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.14 E-value=0.49 Score=49.16 Aligned_cols=76 Identities=20% Similarity=0.197 Sum_probs=52.7
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.-+|+-+|..|.++|+.|+++....+.+++..+ ++|+ +.+|..
T Consensus 152 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~--------------------~ADIvV~AvGkp 211 (281)
T PRK14183 152 EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTK--------------------KADIVIVGVGKP 211 (281)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHh--------------------hCCEEEEecCcc
Confidence 667899999999999999999999999999999987643333332222 3332 222221
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
- .....++++|++++|+.
T Consensus 212 ~-~i~~~~vk~gavvIDvG 229 (281)
T PRK14183 212 N-LITEDMVKEGAIVIDIG 229 (281)
T ss_pred c-ccCHHHcCCCcEEEEee
Confidence 0 11233488999999988
No 374
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=92.11 E-value=0.46 Score=49.86 Aligned_cols=48 Identities=17% Similarity=0.196 Sum_probs=40.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|.+++|+||+|++|.++++.....|++|+.+++++++.+.+.+ ++.
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga 189 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGF 189 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC
Confidence 468899999999999999888888889999999999988877755 553
No 375
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=92.09 E-value=0.23 Score=53.03 Aligned_cols=98 Identities=23% Similarity=0.268 Sum_probs=60.7
Q ss_pred hhHhHHHHHHHHHHHHHcCCceeecccccccccccCCCceEEeccCCCccceecC-chhhHHH--HHhhC-CCCCcEEEE
Q 006768 378 QTGINKQIEDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHG-NTCTAAV--ILNEL-PKDVKEVFL 453 (632)
Q Consensus 378 ~~~i~~~i~~ai~~a~~~g~~v~~LGa~n~~~~l~~~g~l~~~~~p~l~v~vtdG-~sltaa~--~~~~i-~~~gk~vlV 453 (632)
.+.|-.++.+|...|.+.|..-.-|..+=+. .+.. |. -+.. ..++-.| -|...++ ..+.+ ...+|+|+|
T Consensus 107 E~QIlGQVK~Ay~~A~~~g~~g~~L~~lf~~-A~~~-aK-rVRt----eT~I~~~~vSv~s~av~~~~~~~~l~~k~vLv 179 (338)
T PRK00676 107 ETEIQGQVKRAYLKAARERKLPFALHFLFQK-ALKE-GK-VFRS----KGGAPYAEVTIESVVQQELRRRQKSKKASLLF 179 (338)
T ss_pred cHHHHHHHHHHHHHHHHcCCchHHHHHHHHH-HHHH-HH-HHhh----hcCCCCCCcCHHHHHHHHHHHhCCccCCEEEE
Confidence 3567788899999999998765544433220 0100 00 0111 1111111 1222211 12333 367999999
Q ss_pred ecCCchHHHHHHHHHHHcCC-cEEEEecCHH
Q 006768 454 TGATSKLGRAIALYLCRKRV-RVLMLTLSTE 483 (632)
Q Consensus 454 tGasgGIG~aiA~~La~~G~-~V~l~~R~~e 483 (632)
.|+ |-+|+.+|+.|.++|+ +|++++|+.+
T Consensus 180 IGa-Gem~~l~a~~L~~~g~~~i~v~nRt~~ 209 (338)
T PRK00676 180 IGY-SEINRKVAYYLQRQGYSRITFCSRQQL 209 (338)
T ss_pred Ecc-cHHHHHHHHHHHHcCCCEEEEEcCCcc
Confidence 999 9999999999999995 7999999864
No 376
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.07 E-value=0.24 Score=51.65 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=53.2
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|++|+++......+++..+ ++|+ ..+|..
T Consensus 154 ~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~--------------------~ADIvV~AvGkp 213 (288)
T PRK14171 154 EPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITS--------------------KADIVVAAIGSP 213 (288)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEccCCC
Confidence 667899999999999999999999999999999988643333333222 2332 223321
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
......++++|++++|+.
T Consensus 214 -~~i~~~~vk~GavVIDvG 231 (288)
T PRK14171 214 -LKLTAEYFNPESIVIDVG 231 (288)
T ss_pred -CccCHHHcCCCCEEEEee
Confidence 111233489999999988
No 377
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=92.06 E-value=0.32 Score=47.72 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=34.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
+.+||+|+|.|.|.=+|+-+|..|.++|++|+++..+
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~ 95 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN 95 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC
Confidence 6889999999999999999999999999999998643
No 378
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.03 E-value=0.34 Score=50.69 Aligned_cols=42 Identities=26% Similarity=0.302 Sum_probs=37.2
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++|.|.|+ |-+|..+|..++..|.+|++.+++++.+++..++
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~ 47 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNR 47 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence 57899999 8999999999999999999999999887775444
No 379
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.02 E-value=0.48 Score=52.58 Aligned_cols=65 Identities=22% Similarity=0.298 Sum_probs=53.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
...++++|.|+ |.+|+.+++.|.+.|.+|+++++++++.+++.++.. .......|.++.+..+++
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~-~~~~i~gd~~~~~~L~~~ 293 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELP-NTLVLHGDGTDQELLEEE 293 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCC-CCeEEECCCCCHHHHHhc
Confidence 45788999999 999999999999999999999999999998877653 234566688888777554
No 380
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.99 E-value=0.27 Score=51.13 Aligned_cols=74 Identities=16% Similarity=0.239 Sum_probs=53.5
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCC-
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGK- 519 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~- 519 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|+.|+++.+....+++..+ ++|+ +.+|.
T Consensus 152 ~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~--------------------~ADIvIsAvGkp 211 (282)
T PRK14166 152 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTR--------------------QADLIIVAAGCV 211 (282)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEcCCCc
Confidence 567899999999999999999999999999999988754433333322 2232 22332
Q ss_pred -ccCccccccCCCCcEEEeec
Q 006768 520 -WITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 520 -~~~~~d~~~~~~G~vv~d~~ 539 (632)
.++ ...+++|++++|+.
T Consensus 212 ~~i~---~~~vk~GavVIDvG 229 (282)
T PRK14166 212 NLLR---SDMVKEGVIVVDVG 229 (282)
T ss_pred CccC---HHHcCCCCEEEEec
Confidence 122 23489999999988
No 381
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=91.98 E-value=0.33 Score=51.55 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=40.8
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCC
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~ 494 (632)
+++|+|+||+|++|.++++.....|+ +|+.+++++++.+.++++++.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa 202 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF 202 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC
Confidence 48999999999999998887777898 799999999998888777764
No 382
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.98 E-value=0.36 Score=50.24 Aligned_cols=75 Identities=20% Similarity=0.347 Sum_probs=53.7
Q ss_pred hhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCC
Q 006768 442 NELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGK 519 (632)
Q Consensus 442 ~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~ 519 (632)
.+++..||+|+|.|.|.=+|+-+|..|.++|+.|+++......+++..+ ++|+ +.+|.
T Consensus 153 y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~--------------------~ADIvIsAvGk 212 (284)
T PRK14177 153 YGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVR--------------------QADIIVGAVGK 212 (284)
T ss_pred hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEeCCC
Confidence 3678899999999999999999999999999999998754333333322 2222 22222
Q ss_pred --ccCccccccCCCCcEEEeec
Q 006768 520 --WITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 520 --~~~~~d~~~~~~G~vv~d~~ 539 (632)
.+. ..++++|++++|+.
T Consensus 213 ~~~i~---~~~ik~gavVIDvG 231 (284)
T PRK14177 213 PEFIK---ADWISEGAVLLDAG 231 (284)
T ss_pred cCccC---HHHcCCCCEEEEec
Confidence 122 33489999999988
No 383
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.97 E-value=0.27 Score=51.12 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=53.2
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCC-
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGK- 519 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~- 519 (632)
+++.+||+|+|.|.|.=+|+-+|..|.++|++|+++.+....+.+..+ ++|+ +.+|.
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k--------------------~ADIvIsAvGkp 212 (282)
T PRK14180 153 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTT--------------------KADILIVAVGKP 212 (282)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhh--------------------hcCEEEEccCCc
Confidence 567899999999999999999999999999999998654333333222 2332 22332
Q ss_pred -ccCccccccCCCCcEEEeec
Q 006768 520 -WITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 520 -~~~~~d~~~~~~G~vv~d~~ 539 (632)
.+. ..++++|++++|+.
T Consensus 213 ~~i~---~~~vk~gavVIDvG 230 (282)
T PRK14180 213 NFIT---ADMVKEGAVVIDVG 230 (282)
T ss_pred CcCC---HHHcCCCcEEEEec
Confidence 222 23489999999988
No 384
>PLN02477 glutamate dehydrogenase
Probab=91.96 E-value=0.26 Score=54.03 Aligned_cols=38 Identities=11% Similarity=0.164 Sum_probs=32.6
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEE-EEecC
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVL-MLTLS 481 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~-l~~R~ 481 (632)
+.+.+|++|+|.|- |.+|+..|+.|.+.|++|+ +++.+
T Consensus 201 g~~l~g~~VaIqGf-GnVG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 201 GKSIAGQTFVIQGF-GNVGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred CCCccCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCC
Confidence 44678999999997 9999999999999999988 55554
No 385
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=91.83 E-value=0.52 Score=52.31 Aligned_cols=56 Identities=16% Similarity=0.300 Sum_probs=43.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA 508 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~ 508 (632)
+++|+|+ |.+|+++|+.|.++|.+|+++++++++.+++.++.+ ......|.++.+.
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~--~~~~~gd~~~~~~ 57 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLD--VRTVVGNGSSPDV 57 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcC--EEEEEeCCCCHHH
Confidence 5889998 999999999999999999999999999888765332 2233345544433
No 386
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.82 E-value=0.28 Score=51.01 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=52.8
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|++|+++......+++..+ ++|+ ..+|..
T Consensus 151 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~--------------------~ADIvI~AvG~p 210 (282)
T PRK14169 151 DIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTK--------------------EADILVVAVGVP 210 (282)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHh--------------------hCCEEEEccCCc
Confidence 567899999999999999999999999999999988543333333222 2232 222221
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
- .....++++|++++|+.
T Consensus 211 ~-~i~~~~vk~GavVIDvG 228 (282)
T PRK14169 211 H-FIGADAVKPGAVVIDVG 228 (282)
T ss_pred C-ccCHHHcCCCcEEEEee
Confidence 0 01233489999999988
No 387
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.78 E-value=0.46 Score=49.80 Aligned_cols=78 Identities=14% Similarity=0.204 Sum_probs=53.8
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHH----cCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHhhhcC
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCR----KRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKTWIVG 518 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~----~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di~~~g 518 (632)
+++..||+|+|.|.|.=+|+-+|..|.+ +|++|+++..+...+++..++.. ... +.+|
T Consensus 154 ~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~AD----IvI--------------~Avg 215 (295)
T PRK14174 154 NIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQAD----ILI--------------AAIG 215 (295)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCC----EEE--------------EecC
Confidence 5678899999999999999999999998 68999998776655555444321 111 1112
Q ss_pred CccCccccccCCCCcEEEeec
Q 006768 519 KWITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 519 ~~~~~~d~~~~~~G~vv~d~~ 539 (632)
.. .......+++|++++|+.
T Consensus 216 ~~-~li~~~~vk~GavVIDVg 235 (295)
T PRK14174 216 KA-RFITADMVKPGAVVIDVG 235 (295)
T ss_pred cc-CccCHHHcCCCCEEEEee
Confidence 11 111223379999999998
No 388
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.75 E-value=0.4 Score=49.91 Aligned_cols=74 Identities=14% Similarity=0.279 Sum_probs=52.8
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCC-
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGK- 519 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~- 519 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|++|+++......+++.. +++|+ +.+|.
T Consensus 152 ~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~--------------------~~ADIvI~AvG~~ 211 (284)
T PRK14170 152 GTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVA--------------------KEADILVVATGLA 211 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH--------------------hhCCEEEEecCCc
Confidence 56789999999999999999999999999999998764333333322 23333 22222
Q ss_pred -ccCccccccCCCCcEEEeec
Q 006768 520 -WITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 520 -~~~~~d~~~~~~G~vv~d~~ 539 (632)
.+. ..++++|++++|+.
T Consensus 212 ~~i~---~~~vk~GavVIDvG 229 (284)
T PRK14170 212 KFVK---KDYIKPGAIVIDVG 229 (284)
T ss_pred CccC---HHHcCCCCEEEEcc
Confidence 223 23488999999988
No 389
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.75 E-value=0.34 Score=50.73 Aligned_cols=41 Identities=27% Similarity=0.313 Sum_probs=36.8
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
++|.|.|+ |.+|.++|..|+++|.+|++.+|+++++++..+
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 56899998 999999999999999999999999988776544
No 390
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.73 E-value=0.33 Score=50.68 Aligned_cols=42 Identities=21% Similarity=0.453 Sum_probs=37.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++|.|.|+ |-+|.++|..|+++|.+|++.++++++++++.++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~ 43 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQE 43 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence 56899999 9999999999999999999999999988876543
No 391
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=91.71 E-value=0.33 Score=50.79 Aligned_cols=41 Identities=22% Similarity=0.348 Sum_probs=36.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
++|.|.|+ |-+|.++|..|+.+|.+|++++++++++++..+
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 57999999 899999999999999999999999988776544
No 392
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=91.68 E-value=0.15 Score=44.68 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=32.4
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST 482 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~ 482 (632)
..+||+|+|.|+ |.+|..-++.|.+.|++|++++.+.
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 468999999999 9999999999999999999999885
No 393
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=91.67 E-value=0.59 Score=48.68 Aligned_cols=67 Identities=21% Similarity=0.201 Sum_probs=53.4
Q ss_pred ceecCchhhHHHHHhhC--CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 428 RVVHGNTCTAAVILNEL--PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 428 ~vtdG~sltaa~~~~~i--~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
-+.-..++||-..+..+ |++|.+++|+||+|.+|..+.+.---+|++|+-++-.+||.+-+.++++-
T Consensus 129 gvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf 197 (340)
T COG2130 129 GVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF 197 (340)
T ss_pred hhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC
Confidence 34556788888877655 68899999999999999865543334789999999999999988888763
No 394
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=91.67 E-value=0.46 Score=44.24 Aligned_cols=43 Identities=16% Similarity=0.437 Sum_probs=37.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC--cEEEEecCHHHHHHHHHHc
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRV--RVLMLTLSTERFQKIQKEA 492 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~--~V~l~~R~~e~l~~l~~~i 492 (632)
+|.|+||+|.+|.++|..|+..+. ++.++++++++++..+.++
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl 46 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDL 46 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhh
Confidence 588999999999999999999984 7999999988777666554
No 395
>PRK12320 hypothetical protein; Provisional
Probab=91.60 E-value=0.34 Score=56.65 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=40.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQ 507 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~ 507 (632)
+++||||+|-||+.++..|.++|.+|++++|+.... ....+..+..|++|..
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d~~ 53 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------LDPRVDYVCASLRNPV 53 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------ccCCceEEEccCCCHH
Confidence 589999999999999999999999999999865431 1123456667887763
No 396
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=91.36 E-value=0.32 Score=48.14 Aligned_cols=35 Identities=29% Similarity=0.413 Sum_probs=31.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
..+++|+|.|+ ||+|..+|+.|++.|. ++++++++
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 56788999998 9999999999999997 89998876
No 397
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=91.32 E-value=0.31 Score=52.28 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=32.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLST 482 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~ 482 (632)
..+++|+|.|+ ||+|..+|..|++.|. ++++++++.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46788999999 9999999999999997 899998863
No 398
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.28 E-value=0.46 Score=49.45 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=52.8
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHH--cCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcC
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCR--KRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVG 518 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~--~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g 518 (632)
+++..||+++|.|.|.=+|+-+|..|.+ +|+.|+++......+++.. +++|+ ..+|
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~--------------------k~ADIvV~AvG 212 (284)
T PRK14193 153 DVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHT--------------------RRADIIVAAAG 212 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHH--------------------HhCCEEEEecC
Confidence 5678899999999999999999999998 7899998865433333222 23333 2233
Q ss_pred CccCccccccCCCCcEEEeec
Q 006768 519 KWITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 519 ~~~~~~d~~~~~~G~vv~d~~ 539 (632)
.. ......++++|++++|+.
T Consensus 213 kp-~~i~~~~ik~GavVIDvG 232 (284)
T PRK14193 213 VA-HLVTADMVKPGAAVLDVG 232 (284)
T ss_pred Cc-CccCHHHcCCCCEEEEcc
Confidence 22 111233489999999998
No 399
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=91.19 E-value=0.31 Score=49.25 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=37.0
Q ss_pred EEEEecC-CchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 450 EVFLTGA-TSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 450 ~vlVtGa-sgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
+=.||.. |||||+++|++|+++|++|++++|.. .++ .. ....+|+++.+++++.
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~-~l~----~~----~~~~~Dv~d~~s~~~l 70 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR-ALK----PE----PHPNLSIREIETTKDL 70 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh-hcc----cc----cCCcceeecHHHHHHH
Confidence 3456655 58999999999999999999987631 111 10 1134688887777544
No 400
>PRK04148 hypothetical protein; Provisional
Probab=91.18 E-value=0.75 Score=42.48 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=44.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKY 506 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~ 506 (632)
.+++++++.|. |-|.++|..|++.|.+|+.++.+++..+.+++.. ......|+.+.
T Consensus 15 ~~~~kileIG~--GfG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~---~~~v~dDlf~p 70 (134)
T PRK04148 15 GKNKKIVELGI--GFYFKVAKKLKESGFDVIVIDINEKAVEKAKKLG---LNAFVDDLFNP 70 (134)
T ss_pred ccCCEEEEEEe--cCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhC---CeEEECcCCCC
Confidence 35678999998 3888899999999999999999999877775542 34566688754
No 401
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.17 E-value=0.41 Score=49.74 Aligned_cols=76 Identities=14% Similarity=0.227 Sum_probs=53.2
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|+.|+++......+++.. +++|+ ..+|..
T Consensus 152 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~--------------------~~ADIvI~AvGk~ 211 (282)
T PRK14182 152 RVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEV--------------------GRADILVAAIGKA 211 (282)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH--------------------hhCCEEEEecCCc
Confidence 66789999999999999999999999999999999865433333222 23332 223321
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
......++++|++++|+.
T Consensus 212 -~~i~~~~ik~gaiVIDvG 229 (282)
T PRK14182 212 -ELVKGAWVKEGAVVIDVG 229 (282)
T ss_pred -CccCHHHcCCCCEEEEee
Confidence 111233489999999988
No 402
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.10 E-value=0.42 Score=49.94 Aligned_cols=42 Identities=29% Similarity=0.394 Sum_probs=36.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++|.|.|+ |-+|.++|..|++.|.+|.+.+++++++++..+.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 56889998 8999999999999999999999998877766543
No 403
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=91.10 E-value=0.47 Score=50.81 Aligned_cols=78 Identities=21% Similarity=0.278 Sum_probs=54.5
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|+.|+++......+++..+ ++|+ ..+|..
T Consensus 226 ~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r--------------------~ADIVIsAvGkp 285 (364)
T PLN02616 226 NVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITR--------------------EADIIISAVGQP 285 (364)
T ss_pred CCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHh--------------------hCCEEEEcCCCc
Confidence 567889999999999999999999999999999998654333333322 3333 222321
Q ss_pred cCccccccCCCCcEEEeec-cC
Q 006768 521 ITPREQNWAPPGTHFHQFV-VP 541 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~-~P 541 (632)
- .....++++|++++|+. .+
T Consensus 286 ~-~i~~d~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 286 N-MVRGSWIKPGAVVIDVGINP 306 (364)
T ss_pred C-cCCHHHcCCCCEEEeccccc
Confidence 1 11233489999999988 44
No 404
>PLN02928 oxidoreductase family protein
Probab=91.08 E-value=0.46 Score=51.19 Aligned_cols=37 Identities=27% Similarity=0.188 Sum_probs=33.9
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST 482 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~ 482 (632)
...||++.|.|. |.||+++|+.|...|++|+.++|+.
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 367999999998 9999999999999999999999873
No 405
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=91.06 E-value=0.26 Score=46.82 Aligned_cols=36 Identities=19% Similarity=0.093 Sum_probs=32.4
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
+.+||+|+|.|| |.+|...++.|.+.|++|++++.+
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~ 45 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE 45 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc
Confidence 468999999999 999999999999999999998643
No 406
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=91.04 E-value=0.62 Score=48.02 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=41.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
..+++++|+|++|++|.+++..+...|++|+++++++++.+.+ ++++
T Consensus 138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g 184 (323)
T cd05276 138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALG 184 (323)
T ss_pred CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC
Confidence 4578999999999999999999999999999999998888776 4444
No 407
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=91.02 E-value=0.25 Score=51.64 Aligned_cols=31 Identities=19% Similarity=0.327 Sum_probs=26.5
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecC
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
|+||||+|-||+.+++.|+++|.+++++.|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~ 32 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence 7999999999999999999999865555443
No 408
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.89 E-value=0.56 Score=49.05 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=54.5
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+++|.|.|.=+|+-+|..|.++|++|+++......+++..+ ++|+ +.+|..
T Consensus 155 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~--------------------~ADIvVsAvGkp 214 (294)
T PRK14187 155 TRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCS--------------------KADILVAAVGIP 214 (294)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEccCCc
Confidence 578899999999999999999999999999999988654333333222 3332 223322
Q ss_pred cCccccccCCCCcEEEeec-cC
Q 006768 521 ITPREQNWAPPGTHFHQFV-VP 541 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~-~P 541 (632)
- .....++++|++++|+. .+
T Consensus 215 ~-~i~~~~ik~gaiVIDVGin~ 235 (294)
T PRK14187 215 N-FVKYSWIKKGAIVIDVGINS 235 (294)
T ss_pred C-ccCHHHcCCCCEEEEecccc
Confidence 1 11233488999999987 44
No 409
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=90.87 E-value=0.4 Score=47.65 Aligned_cols=46 Identities=9% Similarity=0.176 Sum_probs=38.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQKE 491 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~~ 491 (632)
...||+|+|.|| |.+|..-++.|.+.|++|++++.+. +.++++.++
T Consensus 6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~ 52 (205)
T TIGR01470 6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQ 52 (205)
T ss_pred EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHc
Confidence 367899999999 9999999999999999999998764 355565543
No 410
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=90.85 E-value=0.52 Score=49.34 Aligned_cols=43 Identities=26% Similarity=0.290 Sum_probs=38.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKI 488 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l 488 (632)
..+++++|+||+|++|.++++.+...|.+|+.+.++.++.+.+
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~ 203 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL 203 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 4578899999999999999999999999999999988887776
No 411
>PRK08655 prephenate dehydrogenase; Provisional
Probab=90.83 E-value=0.46 Score=52.83 Aligned_cols=44 Identities=23% Similarity=0.342 Sum_probs=38.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
++.|+||+|++|.++|..|.++|.+|.+++|++++.++.+.+.+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~g 45 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELG 45 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcC
Confidence 58899988999999999999999999999999988777766654
No 412
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=90.72 E-value=0.51 Score=50.29 Aligned_cols=78 Identities=18% Similarity=0.224 Sum_probs=54.4
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|.=+|+-+|..|.++|++|+++......+++.. +++|+ ..+|..
T Consensus 209 ~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~--------------------~~ADIvIsAvGkp 268 (345)
T PLN02897 209 GVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQIT--------------------RKADIVIAAAGIP 268 (345)
T ss_pred CCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHH--------------------hhCCEEEEccCCc
Confidence 56789999999999999999999999999999998865333233322 23333 222321
Q ss_pred cCccccccCCCCcEEEeec-cC
Q 006768 521 ITPREQNWAPPGTHFHQFV-VP 541 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~-~P 541 (632)
- .....++++|++++|+. .+
T Consensus 269 ~-~v~~d~vk~GavVIDVGin~ 289 (345)
T PLN02897 269 N-LVRGSWLKPGAVVIDVGTTP 289 (345)
T ss_pred C-ccCHHHcCCCCEEEEccccc
Confidence 1 11234489999999998 54
No 413
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=90.51 E-value=0.83 Score=53.13 Aligned_cols=62 Identities=13% Similarity=0.293 Sum_probs=52.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
..++++|.|. |.+|+.+|+.|.++|.++++++.|+++.+++.++ ....+..|.+|.+-.+++
T Consensus 399 ~~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~---g~~v~~GDat~~~~L~~a 460 (621)
T PRK03562 399 QQPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF---GMKVFYGDATRMDLLESA 460 (621)
T ss_pred ccCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc---CCeEEEEeCCCHHHHHhc
Confidence 3567999999 8999999999999999999999999999988653 345677899998877655
No 414
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.49 E-value=0.62 Score=48.57 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=53.7
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHc----CCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hh
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRK----RVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WI 516 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~----G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~ 516 (632)
+++..||+|+|.|.|.=+|+-+|..|.++ ++.|+++......+++..+ ++|+ ..
T Consensus 148 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~--------------------~ADIvV~A 207 (287)
T PRK14181 148 EIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILK--------------------TADIIIAA 207 (287)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHh--------------------hCCEEEEc
Confidence 66789999999999999999999999999 7899887643333333222 3332 22
Q ss_pred cCCccCccccccCCCCcEEEeec-cC
Q 006768 517 VGKWITPREQNWAPPGTHFHQFV-VP 541 (632)
Q Consensus 517 ~g~~~~~~d~~~~~~G~vv~d~~-~P 541 (632)
+|.. ......++++|++++|+. .+
T Consensus 208 vG~p-~~i~~~~ik~GavVIDvGin~ 232 (287)
T PRK14181 208 IGVP-LFIKEEMIAEKAVIVDVGTSR 232 (287)
T ss_pred cCCc-CccCHHHcCCCCEEEEecccc
Confidence 3322 111233489999999998 44
No 415
>PRK09620 hypothetical protein; Provisional
Probab=90.47 E-value=0.41 Score=48.48 Aligned_cols=34 Identities=32% Similarity=0.371 Sum_probs=29.6
Q ss_pred CCcEEEEecCC----------------chHHHHHHHHHHHcCCcEEEEec
Q 006768 447 DVKEVFLTGAT----------------SKLGRAIALYLCRKRVRVLMLTL 480 (632)
Q Consensus 447 ~gk~vlVtGas----------------gGIG~aiA~~La~~G~~V~l~~R 480 (632)
.||+|+||+|. |-+|+++|++|.++|++|+++++
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g 51 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG 51 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 57888888764 88999999999999999998875
No 416
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=90.40 E-value=0.68 Score=48.51 Aligned_cols=46 Identities=22% Similarity=0.228 Sum_probs=40.1
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
.+++++|.|++|++|.+++......|++|+.+++++++.+.+ ++++
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g 191 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLG 191 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcC
Confidence 467999999999999999988888999999999999988877 4555
No 417
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=90.40 E-value=0.52 Score=49.35 Aligned_cols=40 Identities=23% Similarity=0.290 Sum_probs=35.6
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQ 489 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~ 489 (632)
|+|.|.|+ |-+|.++|..|+..|.+|++.+++++++++..
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 44 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRGL 44 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 57999999 89999999999999999999999998876543
No 418
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=90.38 E-value=0.61 Score=48.68 Aligned_cols=60 Identities=25% Similarity=0.256 Sum_probs=39.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecC------HHHHHHHHHHcCCCccEEEEeCCCHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLS------TERFQKIQKEAPIDCQNYLVQVTKYQAA 509 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~------~e~l~~l~~~i~~~~~~~~~Dvsd~~~~ 509 (632)
+++||||+|-+|.+++..|.++|.+++.++|+ .+.++++.++...++.....-+++.+.+
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~c 67 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDAC 67 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE------HHHH
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceeecHHhh
Confidence 58999999999999999999999888888765 3455666565544443433344455444
No 419
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=90.33 E-value=0.61 Score=48.19 Aligned_cols=47 Identities=21% Similarity=0.258 Sum_probs=40.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
..|++++|+|+++++|.++++.+...|++|+++++++++.+.+. +++
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g 189 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAG 189 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC
Confidence 35889999999999999999999999999999999988877774 444
No 420
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=90.16 E-value=2.1 Score=45.68 Aligned_cols=118 Identities=16% Similarity=0.132 Sum_probs=78.1
Q ss_pred CccceecCchhhH-------HHHHhhC-CCCCcEEEEecCCchHHHHHHHHHHHc-C-CcEEEEecCHHHHHHHHHHcCC
Q 006768 425 LKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAIALYLCRK-R-VRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 425 l~v~vtdG~slta-------a~~~~~i-~~~gk~vlVtGasgGIG~aiA~~La~~-G-~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
....+.||+-+|+ |++.+-+ +.+.+++.|.|+ |..++..++++++- + -+|.+.+|+++..+++++.+.+
T Consensus 99 ~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGa-G~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~ 177 (330)
T COG2423 99 EPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGA-GAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRK 177 (330)
T ss_pred CEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECC-cHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHh
Confidence 3467889999884 2233333 446789999998 89999999999874 3 4899999999999999888765
Q ss_pred CccEEEEeCCCH-HHHHHHHh--hhcCCccCccccccCCCCcEEEeec--cCCc
Q 006768 495 DCQNYLVQVTKY-QAAQHSKT--WIVGKWITPREQNWAPPGTHFHQFV--VPPI 543 (632)
Q Consensus 495 ~~~~~~~Dvsd~-~~~~~~di--~~~g~~~~~~d~~~~~~G~vv~d~~--~P~~ 543 (632)
+.......+++. ++++.+|+ +.....-.-.+..++++|+++.-+. .|.+
T Consensus 178 ~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l~~G~hI~aiGad~p~k 231 (330)
T COG2423 178 RGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWLKPGTHINAIGADAPGK 231 (330)
T ss_pred hcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhcCCCcEEEecCCCCccc
Confidence 432212234443 44566665 1111111222455689999999777 5555
No 421
>PRK08328 hypothetical protein; Provisional
Probab=90.12 E-value=0.28 Score=49.70 Aligned_cols=42 Identities=26% Similarity=0.472 Sum_probs=34.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLSTERFQKI 488 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~e~l~~l 488 (632)
..+++|+|.|+ ||+|.++|..|++.|. ++++++.+.-+...+
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL 67 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNL 67 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhh
Confidence 45788999999 9999999999999996 899988765443333
No 422
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=90.10 E-value=0.53 Score=49.17 Aligned_cols=41 Identities=12% Similarity=0.267 Sum_probs=36.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++.|.|+ |.+|..+|..|++.|.+|++++|+.++.+++.++
T Consensus 2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 42 (304)
T PRK06522 2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNEN 42 (304)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc
Confidence 4889998 9999999999999999999999988888777653
No 423
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=89.97 E-value=0.51 Score=49.79 Aligned_cols=41 Identities=24% Similarity=0.313 Sum_probs=37.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++.|.|+ |+||.-+|..|++.|.+|++++|+.++++++.++
T Consensus 4 ~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~ 44 (305)
T PRK05708 4 TWHILGA-GSLGSLWACRLARAGLPVRLILRDRQRLAAYQQA 44 (305)
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhc
Confidence 5899999 9999999999999999999999988888877653
No 424
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=89.95 E-value=0.59 Score=52.51 Aligned_cols=45 Identities=22% Similarity=0.223 Sum_probs=37.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
..+|+|+|.|. ||.|+++|+.|.+.|++|.+.+++..+..++.++
T Consensus 13 ~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~ 57 (473)
T PRK00141 13 ELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKLIEV 57 (473)
T ss_pred ccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHh
Confidence 46788999998 9999999999999999999999876655444333
No 425
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=89.92 E-value=0.61 Score=46.52 Aligned_cols=47 Identities=15% Similarity=0.207 Sum_probs=40.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-HHHHHHHHHc
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST-ERFQKIQKEA 492 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~-e~l~~l~~~i 492 (632)
+..||.|+|.|+ |.+|..=|+.|++.|++|++++.+. ++++.+.++-
T Consensus 9 ~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~ 56 (210)
T COG1648 9 DLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIEEG 56 (210)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhc
Confidence 468999999999 9999999999999999999998765 6666666653
No 426
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=89.88 E-value=0.61 Score=52.38 Aligned_cols=38 Identities=21% Similarity=0.048 Sum_probs=33.2
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Q 006768 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST 482 (632)
Q Consensus 444 i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~ 482 (632)
.+..+|+|+|.|+ |++|.++|+.|+++|.+|++++++.
T Consensus 12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~ 49 (480)
T PRK01438 12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGD 49 (480)
T ss_pred cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3456889999998 9999999999999999999998543
No 427
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=89.77 E-value=0.68 Score=48.83 Aligned_cols=42 Identities=19% Similarity=0.438 Sum_probs=37.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++|.|.|+ |.+|.++|..|++.|.+|+++++++++++++.++
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 56889998 8999999999999999999999999888777653
No 428
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.73 E-value=1.1 Score=46.77 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=52.6
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCC-
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGK- 519 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~- 519 (632)
+++..||+|+|.|.|.-+|+.+|..|.++|++|+++......+++..+ ++|+ ..+|.
T Consensus 152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~--------------------~ADIvV~AvG~p 211 (285)
T PRK14191 152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQ--------------------NADIVCVGVGKP 211 (285)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH--------------------hCCEEEEecCCC
Confidence 567889999999998899999999999999999988644433433222 2222 12222
Q ss_pred -ccCccccccCCCCcEEEeec
Q 006768 520 -WITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 520 -~~~~~d~~~~~~G~vv~d~~ 539 (632)
.++ ..++++|++++|+.
T Consensus 212 ~~i~---~~~vk~GavVIDvG 229 (285)
T PRK14191 212 DLIK---ASMVKKGAVVVDIG 229 (285)
T ss_pred CcCC---HHHcCCCcEEEEee
Confidence 122 23479999999988
No 429
>KOG3007 consensus Mu-crystallin [Amino acid transport and metabolism]
Probab=89.68 E-value=1.6 Score=44.61 Aligned_cols=175 Identities=14% Similarity=0.101 Sum_probs=101.2
Q ss_pred cceecCchhhH-------HHHHhhCCCCCcEEEEecCCchHHHHHHHHHHHcC---CcEEEEecCHHHHHHHHHHcCCCc
Q 006768 427 VRVVHGNTCTA-------AVILNELPKDVKEVFLTGATSKLGRAIALYLCRKR---VRVLMLTLSTERFQKIQKEAPIDC 496 (632)
Q Consensus 427 v~vtdG~slta-------a~~~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G---~~V~l~~R~~e~l~~l~~~i~~~~ 496 (632)
.+.-|||-+|. ++...-+...+..+++.=|+|..+.-.-...++.- .+|.+-+|+.+.++++++.+.+..
T Consensus 109 LatmdgnvitlyRtasvSalask~l~~~dS~vL~i~GsG~qA~~hi~ih~~~~pslreVrIwnht~e~A~~la~~lsk~~ 188 (333)
T KOG3007|consen 109 LATMDGNVITLYRTASVSALASKRLENPDSCVLTIFGSGLQAFWHIYIHIKLIPSLREVRIWNHTNEMALDLAKSLSKLF 188 (333)
T ss_pred hhhcccceeeeeehhhhhhhhhhhcCCCCceEEEEEcccchhHHHHHHHHHhcccceEEEeecCChHHHHHHHHHhhhcc
Confidence 34456665541 22333444556666655445777766665555543 379999999999999999887766
Q ss_pred cEEEEeCCCHHHHHHH----Hh-hhcCCccCc-cccccCCCCcEEEeec--cCCccc-----cCCCeEEecC--Ceeecc
Q 006768 497 QNYLVQVTKYQAAQHS----KT-WIVGKWITP-REQNWAPPGTHFHQFV--VPPILH-----FRRDCTYGDL--AAMRLP 561 (632)
Q Consensus 497 ~~~~~Dvsd~~~~~~~----di-~~~g~~~~~-~d~~~~~~G~vv~d~~--~P~~~~-----~r~d~~~~~g--~~M~~P 561 (632)
...+.++...++++++ |+ .-+.....| .-..++++|+.+--+. .|.+.+ .+..|.+.+. .+|.-.
T Consensus 189 ~~iqie~~~~qsl~~aV~~sDIIs~atlstePilfgewlkpgthIdlVGsf~p~mhEcDdelIq~a~vfVDsre~aL~Es 268 (333)
T KOG3007|consen 189 SNIQIELNQYQSLNGAVSNSDIISGATLSTEPILFGEWLKPGTHIDLVGSFKPVMHECDDELIQSACVFVDSREHALLES 268 (333)
T ss_pred cceEEEEEehhhhhcccccCceEEeccccCCceeeeeeecCCceEeeeccCCchHHHHhHHHhhhheEEEecchHHhhhh
Confidence 6667766665555444 43 111011111 1245688997655444 565521 2366777765 444444
Q ss_pred CccccccccccCCCchhhhHHHHHHHHHhhhccCcccccc-cchh
Q 006768 562 DDVEGLGICEYTMDRGVVHACHAGGVVHLLEGWTHHEVGA-IDVD 605 (632)
Q Consensus 562 ~~~~~~~s~~~~lp~~v~~ac~a~~il~aLEg~~~~e~G~-I~v~ 605 (632)
|++. ++ +--++.-+.|-..+.+...-+|+++..|.+ |++-
T Consensus 269 Gell--~~--~~~g~neI~a~l~dlikn~k~gr~~K~c~~~iTlf 309 (333)
T KOG3007|consen 269 GELL--DS--NIAGHNEIEAGLLDLIKNTKLGRNEKGCKRTITLF 309 (333)
T ss_pred hhhc--cc--cccCHHHHHhHHHHHhcCCcccccccCchhheehh
Confidence 4443 12 111244556666667777788887777777 7773
No 430
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=89.67 E-value=0.99 Score=50.93 Aligned_cols=46 Identities=17% Similarity=0.052 Sum_probs=39.3
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
.+.+|+|.|+ |.+|.+.+..+...|++|++++++.++++...+ ++.
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa 208 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGA 208 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC
Confidence 4678999998 999999999999999999999999998776544 554
No 431
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=89.67 E-value=0.59 Score=49.17 Aligned_cols=90 Identities=19% Similarity=0.292 Sum_probs=65.1
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH----Hh--hhcCCcc
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS----KT--WIVGKWI 521 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~----di--~~~g~~~ 521 (632)
....+|-||+|=.|.-+|++|+++|.+..+.+||.+|++.+.++++.++....+++ ++.+++. ++ +-+|...
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~--p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGV--PAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCC--HHHHHHHHhcceEEEecccccc
Confidence 45688999999999999999999999999999999999999999988776665554 4444322 22 3344432
Q ss_pred C---ccccccCCCCcEEEeec
Q 006768 522 T---PREQNWAPPGTHFHQFV 539 (632)
Q Consensus 522 ~---~~d~~~~~~G~vv~d~~ 539 (632)
. |.-..-+..|+..+|+.
T Consensus 84 ~~g~plv~aC~~~GTdY~DiT 104 (382)
T COG3268 84 RYGEPLVAACAAAGTDYADIT 104 (382)
T ss_pred ccccHHHHHHHHhCCCeeecc
Confidence 1 11112245788888887
No 432
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=89.54 E-value=0.68 Score=49.29 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=36.3
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
-|+|.|.|+ |-+|..+|..++.+|.+|.+.+++++.++++.+
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 367999998 889999999999999999999999887665444
No 433
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.51 E-value=0.56 Score=49.18 Aligned_cols=76 Identities=17% Similarity=0.294 Sum_probs=52.5
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHc----CCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hh
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRK----RVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WI 516 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~----G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~ 516 (632)
+++..||+|+|.|.|.=+|+-+|..|.++ ++.|+++.+....+++. ++++|+ +.
T Consensus 156 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~--------------------~~~ADIvVsA 215 (297)
T PRK14168 156 GVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARH--------------------CQRADILIVA 215 (297)
T ss_pred CCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHH--------------------HhhCCEEEEe
Confidence 56789999999999999999999999998 68998876433222222 223333 22
Q ss_pred cCCccCccccccCCCCcEEEeec
Q 006768 517 VGKWITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 517 ~g~~~~~~d~~~~~~G~vv~d~~ 539 (632)
+|.. ......++++|++++|+.
T Consensus 216 vGkp-~~i~~~~ik~gavVIDvG 237 (297)
T PRK14168 216 AGVP-NLVKPEWIKPGATVIDVG 237 (297)
T ss_pred cCCc-CccCHHHcCCCCEEEecC
Confidence 2321 111233489999999998
No 434
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=89.45 E-value=0.33 Score=50.48 Aligned_cols=28 Identities=29% Similarity=0.336 Sum_probs=24.9
Q ss_pred EEecCCchHHHHHHHHHHHcCCcEEEEe
Q 006768 452 FLTGATSKLGRAIALYLCRKRVRVLMLT 479 (632)
Q Consensus 452 lVtGasgGIG~aiA~~La~~G~~V~l~~ 479 (632)
+||||+|-||+.+++.|+++|.+|+++.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~ 28 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLR 28 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEee
Confidence 5899999999999999999998776654
No 435
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=89.44 E-value=0.49 Score=51.54 Aligned_cols=35 Identities=31% Similarity=0.375 Sum_probs=31.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
..+++|+|.|+ ||+|..+|..|++.|. ++++++++
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35778999998 9999999999999997 89999887
No 436
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=89.39 E-value=0.67 Score=48.95 Aligned_cols=40 Identities=23% Similarity=0.259 Sum_probs=35.2
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQ 489 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~ 489 (632)
++|.|+|+ |-+|.++|..|+++|.+|++.+|++++++...
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 36899997 89999999999999999999999988776643
No 437
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=89.31 E-value=1.2 Score=46.53 Aligned_cols=44 Identities=18% Similarity=0.205 Sum_probs=39.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQ 489 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~ 489 (632)
..+++++|+|+++++|.+++..+...|++|+++++++++.+.+.
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 208 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK 208 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 45789999999999999999999999999999999988877663
No 438
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=89.31 E-value=0.33 Score=49.97 Aligned_cols=37 Identities=27% Similarity=0.429 Sum_probs=33.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHH
Q 006768 451 VFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQK 487 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~ 487 (632)
++||||||=||++++..|.+.|.+|+++.|++.+.+.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~ 37 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ 37 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh
Confidence 5899999999999999999999999999998766544
No 439
>PRK13243 glyoxylate reductase; Reviewed
Probab=89.26 E-value=1.1 Score=47.88 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=35.0
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTER 484 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~ 484 (632)
...||++.|.|. |.||+++|+.|...|.+|...+|+.+.
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~ 185 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP 185 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence 468999999998 999999999999999999999987543
No 440
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=89.14 E-value=0.36 Score=50.39 Aligned_cols=31 Identities=16% Similarity=0.358 Sum_probs=27.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 451 VFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 451 vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
|+||||+|.||+.+++.|.++|. +|++++|.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~ 32 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNL 32 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecC
Confidence 58999999999999999999997 68777664
No 441
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=89.08 E-value=1.5 Score=45.77 Aligned_cols=47 Identities=19% Similarity=0.210 Sum_probs=40.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
..+.+++|.|++|++|.+++..+...|++++++.+++++.+.+. +++
T Consensus 139 ~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g 185 (334)
T PTZ00354 139 KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLA 185 (334)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC
Confidence 45789999999999999999999999999888899998888774 454
No 442
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=89.02 E-value=0.89 Score=38.34 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=31.6
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHc-CCcEEEEec
Q 006768 444 LPKDVKEVFLTGATSKLGRAIALYLCRK-RVRVLMLTL 480 (632)
Q Consensus 444 i~~~gk~vlVtGasgGIG~aiA~~La~~-G~~V~l~~R 480 (632)
.+..+|+++|.|+ |++|+.++..|++. +.+|.+.+|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3467899999999 99999999999999 468888887
No 443
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.99 E-value=1.5 Score=46.15 Aligned_cols=67 Identities=21% Similarity=0.178 Sum_probs=49.5
Q ss_pred HhhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCC-CHHHHHHH
Q 006768 441 LNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVT-KYQAAQHS 512 (632)
Q Consensus 441 ~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvs-d~~~~~~~ 512 (632)
.+++. .|+.+.|+|+ ||+|.--.+.-..-|.+|+.++++..+-|++.+.++++. -+|.+ |.+.++++
T Consensus 176 ~~g~~-pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~---fv~~~~d~d~~~~~ 243 (360)
T KOG0023|consen 176 RSGLG-PGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADV---FVDSTEDPDIMKAI 243 (360)
T ss_pred HcCCC-CCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcce---eEEecCCHHHHHHH
Confidence 33444 7999999999 669985444444458999999999888888889888752 34555 77777655
No 444
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=88.97 E-value=2.8 Score=47.54 Aligned_cols=39 Identities=21% Similarity=0.157 Sum_probs=33.2
Q ss_pred hCCCCCcEEEEecCC-chHHHHHHHHHHHcCCcEEEEecC
Q 006768 443 ELPKDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLMLTLS 481 (632)
Q Consensus 443 ~i~~~gk~vlVtGas-gGIG~aiA~~La~~G~~V~l~~R~ 481 (632)
+.+-.+|.++||||+ |.||.+++..|...|++|++..-+
T Consensus 391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~ 430 (866)
T COG4982 391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSR 430 (866)
T ss_pred CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEccc
Confidence 334568999999999 889999999999999999887543
No 445
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=88.93 E-value=1.6 Score=46.69 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=35.2
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTER 484 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~ 484 (632)
...|+++.|.|. |.||+++|+.|...|.+|...+|+.+.
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 367899999998 999999999999999999999998654
No 446
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=88.91 E-value=0.65 Score=42.64 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=28.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
.++|+|.|+ ||+|..+|..|++.|. ++++++.+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence 478999999 9999999999999997 79998765
No 447
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=88.84 E-value=0.6 Score=45.64 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=28.7
Q ss_pred CchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHH
Q 006768 457 TSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQH 511 (632)
Q Consensus 457 sgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~ 511 (632)
||..|.++|+.++.+|++|+++..... +. .+.. ....++.+.++..+
T Consensus 28 SG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-----~p~~--~~~i~v~sa~em~~ 74 (185)
T PF04127_consen 28 SGKMGAALAEEAARRGAEVTLIHGPSS-LP-----PPPG--VKVIRVESAEEMLE 74 (185)
T ss_dssp -SHHHHHHHHHHHHTT-EEEEEE-TTS----------TT--EEEEE-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHCCCEEEEEecCcc-cc-----cccc--ceEEEecchhhhhh
Confidence 688999999999999999999877531 11 1222 34456776666533
No 448
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=88.78 E-value=0.61 Score=50.21 Aligned_cols=66 Identities=11% Similarity=0.159 Sum_probs=48.0
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcC--CcEEEEecCHHH--H-HHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKR--VRVLMLTLSTER--F-QKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G--~~V~l~~R~~e~--l-~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
++.+++||||+|=+|+.++.+|.++| .+|.+++..... . ++.....+..+...++|+.|..++.++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a 73 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNA 73 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhh
Confidence 46789999999999999999999999 688888876531 1 111111345666777898888777544
No 449
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=88.76 E-value=0.56 Score=48.99 Aligned_cols=87 Identities=14% Similarity=0.187 Sum_probs=59.7
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHH----HHHHHh----hhc-CC
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQA----AQHSKT----WIV-GK 519 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~----~~~~di----~~~-g~ 519 (632)
.+|.|.|+ |=+|..-|+-...-|++|++.++|.+|++++.+....++... .++... +.++|+ .++ |.
T Consensus 169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~---~st~~~iee~v~~aDlvIgaVLIpga 244 (371)
T COG0686 169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTL---YSTPSNIEEAVKKADLVIGAVLIPGA 244 (371)
T ss_pred ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEE---EcCHHHHHHHhhhccEEEEEEEecCC
Confidence 34667777 789999999999999999999999999999988776553332 233333 344453 111 11
Q ss_pred ---c-cCccccccCCCCcEEEeec
Q 006768 520 ---W-ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 520 ---~-~~~~d~~~~~~G~vv~d~~ 539 (632)
. .+.+.+...++|++++|++
T Consensus 245 kaPkLvt~e~vk~MkpGsVivDVA 268 (371)
T COG0686 245 KAPKLVTREMVKQMKPGSVIVDVA 268 (371)
T ss_pred CCceehhHHHHHhcCCCcEEEEEE
Confidence 1 2223356678999999987
No 450
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=88.72 E-value=0.52 Score=46.64 Aligned_cols=35 Identities=20% Similarity=0.468 Sum_probs=31.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
...++|+|.|+ ||+|..+|..|++.|. ++++++++
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45788999999 9999999999999998 79999887
No 451
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=88.55 E-value=1.3 Score=45.88 Aligned_cols=47 Identities=19% Similarity=0.182 Sum_probs=40.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
..+++++|+|+++++|++++..+...|++++.++++.++.+.+ .+.+
T Consensus 143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g 189 (328)
T cd08268 143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALG 189 (328)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC
Confidence 3578899999999999999999999999999999998887777 4443
No 452
>PLN02858 fructose-bisphosphate aldolase
Probab=88.55 E-value=2.5 Score=53.62 Aligned_cols=177 Identities=14% Similarity=0.104 Sum_probs=0.0
Q ss_pred ecccCcchhHhHHHHHHHHHHHHHcCCceeecccccc------------------cccccCCCceEEeccCCCccceecC
Q 006768 371 QYFLPFAQTGINKQIEDAILRADRLGVKVLSLAALNK------------------NESLNGGGTLFVDKHPNLKVRVVHG 432 (632)
Q Consensus 371 ~~~~~~~~~~i~~~i~~ai~~a~~~g~~v~~LGa~n~------------------~~~l~~~g~l~~~~~p~l~v~vtdG 432 (632)
.|-....-+-..|.+.-+.+.|++.|+...-..+..+ ++.+.+..++.+.. ...-.+.|-
T Consensus 233 d~~~~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~--~~~~~~~~~ 310 (1378)
T PLN02858 233 DYIEGRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILE--AANRELYKP 310 (1378)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccc--cccccccCh
Q ss_pred chhhHHHHHhhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH----------cCCCccEEEEe
Q 006768 433 NTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE----------APIDCQNYLVQ 502 (632)
Q Consensus 433 ~sltaa~~~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~----------i~~~~~~~~~D 502 (632)
.-+..-++.+ ++..+++.+.|. |.+|.++|..|++.|.+|.+.+|++++.+++.+. +-.++..+.+-
T Consensus 311 ~~~~~~~~~~--~~~~~~IGfIGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~ 387 (1378)
T PLN02858 311 EDLAKQITMQ--AKPVKRIGFIGL-GAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIM 387 (1378)
T ss_pred HHHHHHhhcc--ccCCCeEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEe
Q ss_pred CCCHHHHHHHHhhhcCCccCccccccCCCCcEEEeec-cCCc-------cccC--CCeEEecCCee
Q 006768 503 VTKYQAAQHSKTWIVGKWITPREQNWAPPGTHFHQFV-VPPI-------LHFR--RDCTYGDLAAM 558 (632)
Q Consensus 503 vsd~~~~~~~di~~~g~~~~~~d~~~~~~G~vv~d~~-~P~~-------~~~r--~d~~~~~g~~M 558 (632)
+.+.+++++. +.|..--... +.+|.+++|.+ ..|. .... +++.+++.+.+
T Consensus 388 V~~~~~v~~V---l~g~~g~~~~---l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVs 447 (1378)
T PLN02858 388 VANEVQAENV---LFGDLGAVSA---LPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVS 447 (1378)
T ss_pred cCChHHHHHH---HhchhhHHhc---CCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCC
No 453
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.47 E-value=1 Score=47.20 Aligned_cols=78 Identities=13% Similarity=0.127 Sum_probs=53.2
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHc----CCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hh
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRK----RVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WI 516 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~----G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~ 516 (632)
+++..||+|+|.|.|.=+|+-+|..|.++ ++.|+++......+++.. +++|+ ..
T Consensus 152 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~--------------------~~ADIvIsA 211 (297)
T PRK14167 152 GVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKT--------------------RRADIVVAA 211 (297)
T ss_pred CCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHH--------------------hhCCEEEEc
Confidence 56789999999999999999999999988 789998754333333222 23333 22
Q ss_pred cCCccCccccccCCCCcEEEeec-cC
Q 006768 517 VGKWITPREQNWAPPGTHFHQFV-VP 541 (632)
Q Consensus 517 ~g~~~~~~d~~~~~~G~vv~d~~-~P 541 (632)
+|..- .....++++|++++|+. .+
T Consensus 212 vGkp~-~i~~~~ik~gaiVIDvGin~ 236 (297)
T PRK14167 212 AGVPE-LIDGSMLSEGATVIDVGINR 236 (297)
T ss_pred cCCcC-ccCHHHcCCCCEEEEccccc
Confidence 33210 11223489999999988 44
No 454
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=88.44 E-value=1.5 Score=46.67 Aligned_cols=47 Identities=11% Similarity=-0.083 Sum_probs=37.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|++|+|.|+ |++|.+.+......|++|+.+++++++.+. +++++.
T Consensus 164 ~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~-a~~~Ga 210 (329)
T TIGR02822 164 PPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRL-ALALGA 210 (329)
T ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH-HHHhCC
Confidence 45889999998 999998887766789999989999888654 455654
No 455
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=88.42 E-value=2.3 Score=45.80 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=43.8
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
.+|+.++|.||+||+|.+..+.....|+..+++++++++.+ +.++++++ ..+|..+.+-++..
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lGAd---~vvdy~~~~~~e~~ 218 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLGAD---EVVDYKDENVVELI 218 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcCCc---EeecCCCHHHHHHH
Confidence 46889999999999999988777777855555565655544 55666642 34577775555444
No 456
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=88.37 E-value=0.99 Score=48.04 Aligned_cols=42 Identities=26% Similarity=0.267 Sum_probs=37.5
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
.++.|.|+ |.+|.++|..|++.|.+|.+.+|++++.+.+.+.
T Consensus 5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~ 46 (328)
T PRK14618 5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAE 46 (328)
T ss_pred CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh
Confidence 35888998 9999999999999999999999999988887754
No 457
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=88.36 E-value=1.4 Score=51.06 Aligned_cols=61 Identities=16% Similarity=0.308 Sum_probs=51.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHS 512 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~ 512 (632)
...++|.|. |.+|+.+|+.|.++|.+++++++|+++.+++.+. ....+..|.+|.+..+++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~---g~~v~~GDat~~~~L~~a 460 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKY---GYKVYYGDATQLELLRAA 460 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhC---CCeEEEeeCCCHHHHHhc
Confidence 356999998 9999999999999999999999999999988652 345677899999888666
No 458
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=88.36 E-value=1.1 Score=47.95 Aligned_cols=48 Identities=29% Similarity=0.294 Sum_probs=38.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPID 495 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~ 495 (632)
..|++|+|+|+ ||+|.-..+.....|++|+.++|+++|++.+ ++++++
T Consensus 165 ~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a-~~lGAd 212 (339)
T COG1064 165 KPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGAD 212 (339)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHH-HHhCCc
Confidence 35899999999 6999976666666899999999999988765 445543
No 459
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=88.31 E-value=0.7 Score=50.45 Aligned_cols=45 Identities=27% Similarity=0.386 Sum_probs=40.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
.+-..|+|+||+|++|+-+++.|.++|..|...-|+.++.+++..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 456789999999999999999999999999999999998888766
No 460
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=88.31 E-value=1.7 Score=44.97 Aligned_cols=50 Identities=20% Similarity=0.257 Sum_probs=40.6
Q ss_pred HHHhhCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH
Q 006768 439 VILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKI 488 (632)
Q Consensus 439 ~~~~~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l 488 (632)
+...+++..||+++|.|.|.=+|+-+|..|..++++|+++......+.+.
T Consensus 147 l~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~ 196 (283)
T COG0190 147 LEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASI 196 (283)
T ss_pred HHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHH
Confidence 33456678999999999999999999999999999999987654444433
No 461
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.29 E-value=1.1 Score=46.87 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=52.9
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
.++..||+++|+|.|.=+|+.+|..|.++|++|+++.+....+++..+ ++|+ ..+|..
T Consensus 154 ~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~--------------------~ADIvi~avG~p 213 (285)
T PRK10792 154 GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVR--------------------NADLLVVAVGKP 213 (285)
T ss_pred CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHh--------------------hCCEEEEcCCCc
Confidence 567889999999997779999999999999999998775443333322 2222 222211
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
- .....++++|++++|+.
T Consensus 214 ~-~v~~~~vk~gavVIDvG 231 (285)
T PRK10792 214 G-FIPGEWIKPGAIVIDVG 231 (285)
T ss_pred c-cccHHHcCCCcEEEEcc
Confidence 0 01223488999999988
No 462
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=88.12 E-value=0.86 Score=48.58 Aligned_cols=34 Identities=26% Similarity=0.251 Sum_probs=32.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEec
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTL 480 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R 480 (632)
..||++.|.|. |.||+++|+.+..-|.+|+..++
T Consensus 140 l~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~ 173 (324)
T COG0111 140 LAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDP 173 (324)
T ss_pred ccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECC
Confidence 45999999999 99999999999999999999998
No 463
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=88.00 E-value=0.46 Score=51.01 Aligned_cols=35 Identities=34% Similarity=0.414 Sum_probs=31.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
...++|+|.|+ ||+|..+|..|++.|. +|.+++.+
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46788999999 9999999999999997 89999876
No 464
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=87.97 E-value=0.39 Score=48.94 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=31.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLST 482 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~ 482 (632)
.++++|+|.|+ ||+|..+|..|++.|. ++++++.+.
T Consensus 22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 45788999999 9999999999999996 888887653
No 465
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=87.93 E-value=1.1 Score=48.78 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=32.9
Q ss_pred CCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Q 006768 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST 482 (632)
Q Consensus 444 i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~ 482 (632)
...+|++|.|-|- |.+|+..|+.|.+.|++|+.++-+.
T Consensus 203 ~~l~G~rVaVQG~-GNVg~~aa~~l~~~GAkvva~sds~ 240 (411)
T COG0334 203 DDLEGARVAVQGF-GNVGQYAAEKLHELGAKVVAVSDSK 240 (411)
T ss_pred CCcCCCEEEEECc-cHHHHHHHHHHHHcCCEEEEEEcCC
Confidence 3478999999997 9999999999999999998876543
No 466
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=87.87 E-value=0.99 Score=47.89 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=33.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE 483 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e 483 (632)
..||++.|.|- |.||+++|+.|...|.+|...+|+.+
T Consensus 134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~ 170 (312)
T PRK15469 134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK 170 (312)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 57899999998 99999999999999999999887653
No 467
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=87.83 E-value=0.93 Score=51.34 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=36.9
Q ss_pred CcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 448 gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
-++|.|.|+ |-.|..||..+++.|.+|++.+|+++++++..+
T Consensus 5 ~~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~ 46 (503)
T TIGR02279 5 VVTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALARAIA 46 (503)
T ss_pred ccEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 356999999 899999999999999999999999998876533
No 468
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=87.83 E-value=1 Score=47.56 Aligned_cols=41 Identities=24% Similarity=0.389 Sum_probs=37.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++.|.|+ |.+|.++|..|++.|.+|.+++|++++.+++.++
T Consensus 3 kI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 43 (325)
T PRK00094 3 KIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINAD 43 (325)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc
Confidence 5889998 9999999999999999999999999988888765
No 469
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=87.66 E-value=1.6 Score=45.05 Aligned_cols=47 Identities=19% Similarity=0.172 Sum_probs=40.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
..+++++|+|++|++|.+++..+...|++|+++.+++++.+.+ ++++
T Consensus 138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g 184 (325)
T TIGR02824 138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALG 184 (325)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC
Confidence 3578999999999999999999999999999999998887755 5554
No 470
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.65 E-value=0.93 Score=47.30 Aligned_cols=76 Identities=16% Similarity=0.237 Sum_probs=51.9
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|.|.|+=+|+.+|..|.++|++|+++......+++.. +++|+ ..+|..
T Consensus 153 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~--------------------~~ADIVV~avG~~ 212 (285)
T PRK14189 153 GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHT--------------------RQADIVVAAVGKR 212 (285)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHh--------------------hhCCEEEEcCCCc
Confidence 56789999999999777799999999999999998765433333222 22332 222211
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
......++++|++++|+.
T Consensus 213 -~~i~~~~ik~gavVIDVG 230 (285)
T PRK14189 213 -NVLTADMVKPGATVIDVG 230 (285)
T ss_pred -CccCHHHcCCCCEEEEcc
Confidence 011224489999999998
No 471
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=87.60 E-value=1.6 Score=45.64 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=41.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
..+++++|.|++|++|.+++..+...|++|+.+.++.++.+.+.++++
T Consensus 144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g 191 (329)
T cd05288 144 KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELG 191 (329)
T ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcC
Confidence 357899999999999999999888999999999999988887766454
No 472
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=87.51 E-value=0.93 Score=47.41 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=34.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
++.|.|+ |.+|..+|..|++.|.+|.+++| .++.+++.+
T Consensus 2 kI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~ 40 (305)
T PRK12921 2 RIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE 40 (305)
T ss_pred eEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh
Confidence 4788998 99999999999999999999999 777777654
No 473
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=87.50 E-value=2 Score=46.81 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=33.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST 482 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~ 482 (632)
...+++.|.||.|.+|..+|+.|.++|.+|.+.+|+.
T Consensus 96 ~~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 96 PDLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 3567899999889999999999999999999999864
No 474
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=87.42 E-value=1.1 Score=47.70 Aligned_cols=41 Identities=27% Similarity=0.467 Sum_probs=36.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
++.|.|| |.+|.++|..|++.|.+|.+.+|+++..+++.++
T Consensus 2 kI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~~ 42 (326)
T PRK14620 2 KISILGA-GSFGTAIAIALSSKKISVNLWGRNHTTFESINTK 42 (326)
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHc
Confidence 3789999 9999999999999999999999999888877653
No 475
>PLN02996 fatty acyl-CoA reductase
Probab=87.42 E-value=0.79 Score=51.79 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=31.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcC---CcEEEEecCH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKR---VRVLMLTLST 482 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G---~~V~l~~R~~ 482 (632)
.+||+|+||||||-+|+.++..|.+.+ .+|.+..|++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~ 48 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAS 48 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 468999999999999999999998865 2677877764
No 476
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=87.29 E-value=1.3 Score=47.44 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=40.0
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|++|+|.|+ |++|.+.+..+...|++|+.+++++++++.+ ++++.
T Consensus 165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga 211 (349)
T TIGR03201 165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGA 211 (349)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCC
Confidence 45889999999 9999999988888899999999999998866 45654
No 477
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=87.28 E-value=2 Score=44.41 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=37.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVR-VLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~-V~l~~R~~e~l~~l~~~i~~ 494 (632)
..+++|+|.|+ |++|...++.+...|++ |++++++++|.+. +++++.
T Consensus 119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a~~~Ga 166 (280)
T TIGR03366 119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL-ALSFGA 166 (280)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCC
Confidence 46889999997 89999999888888986 8888888888764 455554
No 478
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.26 E-value=1.4 Score=46.06 Aligned_cols=76 Identities=13% Similarity=0.170 Sum_probs=52.4
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hhcCCc
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WIVGKW 520 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~~g~~ 520 (632)
+++..||+|+|+|.|.=+|+.+|..|.++|++|+++......+++..+ ++|+ ..+|..
T Consensus 159 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~--------------------~ADIvv~AvG~p 218 (287)
T PRK14176 159 GVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTL--------------------DADILVVATGVK 218 (287)
T ss_pred CCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHh--------------------hCCEEEEccCCc
Confidence 567899999999998779999999999999999998754333333222 2232 112221
Q ss_pred cCccccccCCCCcEEEeec
Q 006768 521 ITPREQNWAPPGTHFHQFV 539 (632)
Q Consensus 521 ~~~~d~~~~~~G~vv~d~~ 539 (632)
- .....++++|++++|+.
T Consensus 219 ~-~i~~~~vk~gavVIDvG 236 (287)
T PRK14176 219 H-LIKADMVKEGAVIFDVG 236 (287)
T ss_pred c-ccCHHHcCCCcEEEEec
Confidence 0 11223588999999988
No 479
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=87.23 E-value=1.1 Score=50.98 Aligned_cols=42 Identities=19% Similarity=0.243 Sum_probs=37.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQ 489 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~ 489 (632)
.-++|.|.|+ |-+|..||..++++|.+|++.+|+++++++..
T Consensus 6 ~i~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~ 47 (507)
T PRK08268 6 SIATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAGAAAAAR 47 (507)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 3467999999 89999999999999999999999999887753
No 480
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=87.05 E-value=2 Score=45.51 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=39.2
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVR-VLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~-V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|++|+|+|+ |++|.+.+..+...|++ |+++++++++.+.+ ++++.
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga 209 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGA 209 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCC
Confidence 45889999987 99999999888889998 99999999887765 55653
No 481
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=86.92 E-value=1.3 Score=47.15 Aligned_cols=47 Identities=17% Similarity=0.227 Sum_probs=38.4
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..+++|+|+|+ |++|.+.+..+...|+ +|+++++++++++.+ ++++.
T Consensus 168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa 215 (343)
T PRK09880 168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGA 215 (343)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCC
Confidence 35889999997 9999999887778898 688889999888755 45664
No 482
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.92 E-value=1.3 Score=46.14 Aligned_cols=38 Identities=21% Similarity=0.342 Sum_probs=34.6
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQK 487 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~ 487 (632)
+++.|.|+ |-+|.++|..++++|.+|++++++++++++
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~~~~ 41 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAAVDR 41 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHHHHH
Confidence 46889999 999999999999999999999999988754
No 483
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=86.90 E-value=2.6 Score=44.04 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=32.1
Q ss_pred ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Q 006768 454 TGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQK 490 (632)
Q Consensus 454 tGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~ 490 (632)
.|. |-+|.++|+.|++.|.+|.+.+|++++.+++.+
T Consensus 2 IGl-G~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~ 37 (288)
T TIGR01692 2 IGL-GNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVA 37 (288)
T ss_pred Ccc-cHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 455 889999999999999999999999999888765
No 484
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=86.68 E-value=2.4 Score=42.85 Aligned_cols=46 Identities=17% Similarity=0.205 Sum_probs=36.9
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEE-EEec----------CHHHHHHHHHH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVL-MLTL----------STERFQKIQKE 491 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~-l~~R----------~~e~l~~l~~~ 491 (632)
...++++.|.|- |.+|+.+|+.|.+.|++|+ +++. +.+++.+.+++
T Consensus 28 ~l~~~~v~I~G~-G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~ 84 (227)
T cd01076 28 GLAGARVAIQGF-GNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKE 84 (227)
T ss_pred CccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHh
Confidence 467899999996 9999999999999999988 5555 45565555554
No 485
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=86.57 E-value=2.5 Score=47.72 Aligned_cols=42 Identities=17% Similarity=0.325 Sum_probs=37.8
Q ss_pred cEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 449 KEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 449 k~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
.++.+.|- |-.|.++|+.|+++|.+|.+.+|+.++.+++.++
T Consensus 7 ~~IG~IGL-G~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~ 48 (493)
T PLN02350 7 SRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVER 48 (493)
T ss_pred CCEEEEee-HHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHh
Confidence 35888997 8999999999999999999999999999888763
No 486
>PLN02503 fatty acyl-CoA reductase 2
Probab=86.32 E-value=1.8 Score=50.11 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=31.5
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC---cEEEEecCH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV---RVLMLTLST 482 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~---~V~l~~R~~ 482 (632)
.++|+|+||||||=+|+.+++.|.+.+- +|.+..|.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k 156 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAK 156 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 3699999999999999999999998753 678887753
No 487
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=86.25 E-value=0.89 Score=52.30 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=29.8
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
.+.+|+|.|+ ||+|..+|+.|++.|. ++++++.+
T Consensus 337 ~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D 371 (664)
T TIGR01381 337 SQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNG 371 (664)
T ss_pred hcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 4788999999 9999999999999996 78887643
No 488
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=86.20 E-value=0.68 Score=47.31 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=30.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
...++|+|.|+ ||+|..+|+.|++.|. ++++++.+
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 46788999999 9999999999999996 88887654
No 489
>PLN02306 hydroxypyruvate reductase
Probab=86.17 E-value=1.8 Score=47.38 Aligned_cols=37 Identities=19% Similarity=0.238 Sum_probs=32.8
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHH-HcCCcEEEEecCH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLC-RKRVRVLMLTLST 482 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La-~~G~~V~l~~R~~ 482 (632)
...||++.|.|. |.||+++|+.++ .-|++|+..+|..
T Consensus 162 ~L~gktvGIiG~-G~IG~~vA~~l~~~fGm~V~~~d~~~ 199 (386)
T PLN02306 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (386)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 367999999998 999999999986 7799999998864
No 490
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=86.12 E-value=2.1 Score=44.66 Aligned_cols=47 Identities=26% Similarity=0.265 Sum_probs=39.4
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
++.+++|.|++|++|.+++......|++|+++.+++++.+.+ ++++.
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~ 192 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGA 192 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC
Confidence 356899999999999999988888899999999999888777 44553
No 491
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=86.09 E-value=1.6 Score=45.13 Aligned_cols=46 Identities=20% Similarity=0.220 Sum_probs=40.7
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcC
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAP 493 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~ 493 (632)
.+..++|.|++|++|.+++......|++|+.+.+++++.+.+++ ++
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g 177 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LG 177 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC
Confidence 48999999999999999999999999999999999888887755 54
No 492
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.07 E-value=2.1 Score=44.88 Aligned_cols=78 Identities=12% Similarity=0.125 Sum_probs=53.2
Q ss_pred hCCCCCcEEEEecCCchHHHHHHHHHHHc----CCcEEEEecCHHHHHHHHHHcCCCccEEEEeCCCHHHHHHHHh--hh
Q 006768 443 ELPKDVKEVFLTGATSKLGRAIALYLCRK----RVRVLMLTLSTERFQKIQKEAPIDCQNYLVQVTKYQAAQHSKT--WI 516 (632)
Q Consensus 443 ~i~~~gk~vlVtGasgGIG~aiA~~La~~----G~~V~l~~R~~e~l~~l~~~i~~~~~~~~~Dvsd~~~~~~~di--~~ 516 (632)
+++..||+|+|.|.|.=+|+-+|..|.++ ++.|+++......+++..+ ++|+ +.
T Consensus 152 ~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~--------------------~ADIvIsA 211 (293)
T PRK14185 152 HIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECL--------------------EADIIIAA 211 (293)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHh--------------------hCCEEEEc
Confidence 56789999999999999999999999998 6899988543333333322 2232 22
Q ss_pred cCCccCccccccCCCCcEEEeec-cC
Q 006768 517 VGKWITPREQNWAPPGTHFHQFV-VP 541 (632)
Q Consensus 517 ~g~~~~~~d~~~~~~G~vv~d~~-~P 541 (632)
+|..- .....++++|++++|+. .+
T Consensus 212 vGkp~-~i~~~~vk~gavVIDvGin~ 236 (293)
T PRK14185 212 LGQPE-FVKADMVKEGAVVIDVGTTR 236 (293)
T ss_pred cCCcC-ccCHHHcCCCCEEEEecCcc
Confidence 23211 11234489999999998 44
No 493
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=86.07 E-value=2.4 Score=42.50 Aligned_cols=43 Identities=23% Similarity=0.255 Sum_probs=37.1
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQ 489 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~ 489 (632)
..+++++|+|+++ +|.+++..+...|.+|+.+.+++++.+.+.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 175 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK 175 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence 4678999999976 999999988889999999999988877663
No 494
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=86.03 E-value=1.3 Score=46.05 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=35.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHH
Q 006768 450 EVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKE 491 (632)
Q Consensus 450 ~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~ 491 (632)
+|.|.|. |.+|.++|..|.++|.+|.+++|++++++++.+.
T Consensus 2 ~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~ 42 (279)
T PRK07417 2 KIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIER 42 (279)
T ss_pred eEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence 4788896 8999999999999999999999999888776543
No 495
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=85.96 E-value=2.4 Score=43.85 Aligned_cols=48 Identities=25% Similarity=0.178 Sum_probs=40.7
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|++++|.|++|++|.++++.....|++|+.+.+++++.+.+ .+++.
T Consensus 141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~ 188 (320)
T cd08243 141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGA 188 (320)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC
Confidence 4578999999999999999998889999999999998887776 45543
No 496
>PRK06849 hypothetical protein; Provisional
Probab=85.88 E-value=1.4 Score=47.95 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=33.2
Q ss_pred CCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH
Q 006768 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTE 483 (632)
Q Consensus 447 ~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e 483 (632)
..|+|+|||++.++|..+|+.|.++|.+|++++.++.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4688999999888999999999999999999987753
No 497
>PRK08223 hypothetical protein; Validated
Probab=85.84 E-value=0.62 Score=48.66 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=30.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
.++++|+|.|+ ||+|..+|..|++.|. ++.+++.+
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46788999999 9999999999999996 88888655
No 498
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=85.66 E-value=2.1 Score=46.13 Aligned_cols=48 Identities=13% Similarity=0.079 Sum_probs=38.9
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHHHcCC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLSTERFQKIQKEAPI 494 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~e~l~~l~~~i~~ 494 (632)
..|++|+|.|+ |++|.+.+......|++|++++.+.++.++++++++.
T Consensus 182 ~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga 229 (360)
T PLN02586 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGA 229 (360)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCC
Confidence 46889999886 9999999888888899988888777776666666664
No 499
>PRK07574 formate dehydrogenase; Provisional
Probab=85.66 E-value=2.6 Score=46.02 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=33.8
Q ss_pred CCCCcEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Q 006768 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLMLTLST 482 (632)
Q Consensus 445 ~~~gk~vlVtGasgGIG~aiA~~La~~G~~V~l~~R~~ 482 (632)
...||+|.|.|. |.||+++|+.|...|.+|...+|+.
T Consensus 189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence 367999999998 8999999999999999999999875
No 500
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=85.64 E-value=0.99 Score=45.08 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=31.3
Q ss_pred CCCcEEEEecCCchHHHHHHHHHHHcCC-cEEEEecC
Q 006768 446 KDVKEVFLTGATSKLGRAIALYLCRKRV-RVLMLTLS 481 (632)
Q Consensus 446 ~~gk~vlVtGasgGIG~aiA~~La~~G~-~V~l~~R~ 481 (632)
...++|+|.|+ ||+|..+|..|++.|. ++++++.+
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45778999998 9999999999999997 69998876
Done!