Your job contains 1 sequence.
>006771
MIELIEMENHSKRRVVCAENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAK
NPIKTLKDLSQVKGVGKWILKLMQEFFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQ
RNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRD
WYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSDK
NELSELDLVLAHPDSNGEVTECFVPLSRKEKSTDVPFESLERFTRMGYSKEQVLRAFGEV
SETSQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDAASRTCISTNDDPKTRVNLL
SVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGI
WIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNS
SEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKCAAV
CPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEG
DVCAQEEMLWKQSNNAVSASASRNIFQLVWGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006771
(632 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126729 - symbol:MUS81 "AT4G30870" species:370... 1026 1.1e-187 2
TAIR|locus:2167057 - symbol:AT5G39770 "AT5G39770" species... 619 2.5e-121 4
POMBASE|SPCC4G3.05c - symbol:mus81 "Holliday junction res... 254 1.7e-30 3
SGD|S000002794 - symbol:MUS81 "Subunit of the structure-s... 221 8.1e-25 4
ASPGD|ASPL0000038580 - symbol:AN3118 species:162425 "Emer... 241 7.7e-24 3
ZFIN|ZDB-GENE-040426-2923 - symbol:mus81 "MUS81 endonucle... 232 1.8e-23 3
DICTYBASE|DDB_G0284175 - symbol:DDB_G0284175 "putative cr... 195 2.8e-22 4
UNIPROTKB|G4MSU8 - symbol:MGG_04585 "Crossover junction e... 227 2.9e-22 3
UNIPROTKB|E1B8J2 - symbol:MUS81 "Uncharacterized protein"... 234 3.2e-22 2
UNIPROTKB|H0YDE3 - symbol:MUS81 "Crossover junction endon... 232 3.7e-22 2
UNIPROTKB|H0YDU2 - symbol:MUS81 "Crossover junction endon... 230 1.1e-21 2
FB|FBgn0040347 - symbol:mus81 "mus81" species:7227 "Droso... 276 1.6e-21 2
UNIPROTKB|E9PRI1 - symbol:MUS81 "Crossover junction endon... 232 1.7e-21 2
UNIPROTKB|Q96NY9 - symbol:MUS81 "Crossover junction endon... 232 3.6e-21 2
WB|WBGene00016602 - symbol:mus-81 species:6239 "Caenorhab... 246 4.9e-21 2
RGD|1311957 - symbol:Mus81 "MUS81 endonuclease homolog (S... 228 1.7e-20 2
UNIPROTKB|E2RNT7 - symbol:MUS81 "Uncharacterized protein"... 226 1.7e-20 2
MGI|MGI:1918961 - symbol:Mus81 "MUS81 endonuclease homolo... 229 5.4e-20 2
UNIPROTKB|F1RU20 - symbol:MUS81 "Uncharacterized protein"... 223 5.3e-19 2
UNIPROTKB|F6Q077 - symbol:MUS81 "Uncharacterized protein"... 192 6.1e-18 2
DICTYBASE|DDB_G0276519 - symbol:mus81 "crossover junction... 193 2.5e-17 3
CGD|CAL0000062 - symbol:orf19.4206 species:5476 "Candida ... 190 2.0e-11 1
GENEDB_PFALCIPARUM|PF14_0470 - symbol:PF14_0470 "hypothet... 131 4.9e-09 4
UNIPROTKB|Q8IKY1 - symbol:PF14_0470 "DNA replication rela... 131 4.9e-09 4
UNIPROTKB|H0YDK3 - symbol:MUS81 "Crossover junction endon... 93 1.4e-05 2
>TAIR|locus:2126729 [details] [associations]
symbol:MUS81 "AT4G30870" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=ISS;IMP] [GO:0006312 "mitotic recombination"
evidence=RCA;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0051026 "chiasma assembly" evidence=IGI]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=RCA;IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0048522 "positive
regulation of cellular process" evidence=RCA] [GO:0051276
"chromosome organization" evidence=RCA] InterPro:IPR003583
InterPro:IPR006166 InterPro:IPR020819 Pfam:PF02732 SMART:SM00278
SMART:SM00891 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0003677
InterPro:IPR011335 SUPFAM:SSF52980 GO:GO:0000724 GO:GO:0000794
GO:GO:0004519 EMBL:AL022198 EMBL:AL161577 GO:GO:0006312
GO:GO:0051026 eggNOG:COG1948 Gene3D:3.40.50.10130 EMBL:AB177892
EMBL:EF154086 IPI:IPI00516910 IPI:IPI00657587 PIR:D85361
RefSeq:NP_194816.2 UniGene:At.51242 ProteinModelPortal:Q5W9E7
STRING:Q5W9E7 PRIDE:Q5W9E7 EnsemblPlants:AT4G30870.1 GeneID:829211
KEGG:ath:AT4G30870 TAIR:At4g30870 HOGENOM:HOG000029569
InParanoid:Q5W9E7 KO:K08991 OMA:REVANEC PhylomeDB:Q5W9E7
ProtClustDB:CLSN2918850 Genevestigator:Q5W9E7 Uniprot:Q5W9E7
Length = 659
Score = 1026 (366.2 bits), Expect = 1.1e-187, Sum P(2) = 1.1e-187
Identities = 200/294 (68%), Positives = 237/294 (80%)
Query: 342 ASRTCIST--NDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIE 399
A + C S+ +D K N+ +PPL FGE FE+AY+V+LILDDRE+FA +GSRSR I+E
Sbjct: 366 AVKACSSSLASDGTKGITNIPRLPPLQFGETFEEAYDVILILDDREKFATKGSRSRNIVE 425
Query: 400 NVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQK 459
N+CS+F I++EVRRLPVGD IWIARH+ ++EYVLDFI ERK VDD+RSSIRDNRYRDQK
Sbjct: 426 NICSEFNIKIEVRRLPVGDCIWIARHKYLETEYVLDFIAERKNVDDMRSSIRDNRYRDQK 485
Query: 460 LRLVRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYIT 519
LRL R G KKLIY++EGDPN S+AAESIKTACFTTEILEGFDV RT GL +TLRKYGY+T
Sbjct: 486 LRLQRSGFKKLIYILEGDPNHSDAAESIKTACFTTEILEGFDVLRTHGLGETLRKYGYLT 545
Query: 520 QAITEYYKVELPE-DQLKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIA 578
++I +YYK+ + + DQ K AA CP FD F+KRCQDLDKMT+SDVFA+QLMQVPQVTEEIA
Sbjct: 546 KSIYQYYKLRVNDNDQSKGAASCPSFDSFVKRCQDLDKMTISDVFAIQLMQVPQVTEEIA 605
Query: 579 ITVLDLYPTLLSLAHAYSILEGDVCAQEEMLWKQXXXXXXXXXXXXIFQLVWGK 632
I VLD+YPTLLSLA AYS LE DV AQEEML + IF+LVWG+
Sbjct: 606 IAVLDMYPTLLSLASAYSHLEADVSAQEEMLRNRSNNVICASASKNIFKLVWGE 659
Score = 816 (292.3 bits), Expect = 1.1e-187, Sum P(2) = 1.1e-187
Identities = 172/318 (54%), Positives = 220/318 (69%)
Query: 12 KRRVVCAENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQ 71
+RRV+C EN LA Y+LQK+QE AE PKGLSEN++ T K Y ++CDAK+PI TLKDLSQ
Sbjct: 4 ERRVLCPENRGLAAYVLQKKQEYAEKPKGLSENLERTFVKGYRSVCDAKDPINTLKDLSQ 63
Query: 72 VKGVGKWILKLMQEFFETDSGGSEPEDLXXXXXXXXXXXXXXXXRYMPQRNSVAYALLIT 131
+KG GKW++KLM+ +F+T SE EDL RY+PQRNSV YALLIT
Sbjct: 64 IKGFGKWMVKLMKGYFDTAVESSEQEDLPDNRAGKKANGKK---RYIPQRNSVGYALLIT 120
Query: 132 LYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTL 191
L+R TTNG EFMRKQ+LIDAA+A+GLSH P+ PEKGKGK G S R+WYSGWSCM TL
Sbjct: 121 LHRRTTNGKEFMRKQELIDAADANGLSHAPVGPEKGKGKAG-LGHSKREWYSGWSCMTTL 179
Query: 192 ITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSDKNELSELDLVLA 251
I KGLVVKSS PAKYMLT GRE A EC+ RSG DS++ +++ + D ++
Sbjct: 180 IQKGLVVKSSNPAKYMLTVEGREVANECILRSGLPDSVD-ILSVDEMDPTPQAK-KTPNQ 237
Query: 252 HPDSNGEVTE--CFV-PLSRKEKSTDVPFESLERFTRMGYSKEQVLRAFGEVSETSQHKE 308
+P + + E +V P R + + +P + LE+FT GYSKEQV+ AF EVS+ S K+
Sbjct: 238 NPTCSFTMREELPYVDPRCRAQSA--IPSDILEKFTPFGYSKEQVVAAFREVSDGSGDKD 295
Query: 309 ISSLWPAVLCRLQEDEVY 326
S+LW +V+C L++ EVY
Sbjct: 296 PSTLWLSVMCHLRQAEVY 313
>TAIR|locus:2167057 [details] [associations]
symbol:AT5G39770 "AT5G39770" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISS] InterPro:IPR006166 InterPro:IPR020819 Pfam:PF02732
SMART:SM00891 EMBL:CP002688 GO:GO:0003677 GO:GO:0006259
GO:GO:0090305 InterPro:IPR011335 SUPFAM:SSF52980 GO:GO:0004519
Gene3D:3.40.50.10130 KO:K08991 IPI:IPI00531147 RefSeq:NP_198793.4
UniGene:At.55260 ProteinModelPortal:F4KFU8 PRIDE:F4KFU8
EnsemblPlants:AT5G39770.1 GeneID:833973 KEGG:ath:AT5G39770
Uniprot:F4KFU8
Length = 1272
Score = 619 (223.0 bits), Expect = 2.5e-121, Sum P(4) = 2.5e-121
Identities = 129/214 (60%), Positives = 156/214 (72%)
Query: 425 HRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAA 484
H+ Q EYVLDFIVERK VDD+RSSI DNRY+DQKLRL R G+KKLIY++EGDPN S+ A
Sbjct: 1043 HKYQQDEYVLDFIVERKNVDDMRSSIMDNRYKDQKLRLQRSGIKKLIYILEGDPNQSKTA 1102
Query: 485 ESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKCAAVCPPF 544
ESIKTACFTTEILEGFDV RT+GL +TLRKYGY+T++I +YYK + +DQ K A CP +
Sbjct: 1103 ESIKTACFTTEILEGFDVVRTNGLGETLRKYGYLTKSIYQYYKSLVNDDQRKVADSCPSY 1162
Query: 545 DEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEE---------IAITVLDLYPTLLSLAHAY 595
D+F++RC DL KMT+SDVFA+QLMQV + + AI VLD Y TL SLA AY
Sbjct: 1163 DDFVQRCPDLGKMTISDVFAIQLMQVLSLAKPSFGFLSATFFAIAVLDKYKTLRSLASAY 1222
Query: 596 SILEGDVCAQEEMLWKQXXXXXXXXXXXXIFQLV 629
S L+ +V AQEEML Q I++LV
Sbjct: 1223 SKLD-NVSAQEEMLRNQSNNVICASASKNIYKLV 1255
Score = 483 (175.1 bits), Expect = 2.5e-121, Sum P(4) = 2.5e-121
Identities = 108/193 (55%), Positives = 126/193 (65%)
Query: 38 PKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQVKGVGKWILKLMQEFFETDSGGSEPE 97
PKGLSE +M KAY N+CDAK+ I TLKDLS++KG GK+++KLMQ +F T + SE E
Sbjct: 762 PKGLSEYQEMKFVKAYRNVCDAKDSIDTLKDLSKIKGFGKYMVKLMQGYFVTGAASSEQE 821
Query: 98 DLXXXXXXXXXXXXXXXXRYMPQRNSVAYALLITLYR-GTTNGNEFMRKQDLIDAAEASG 156
L Y PQRN+ AYALL TL+R T NG + MRKQ L+DAA+ASG
Sbjct: 822 ALPGNRAGKKAKGSEP---YKPQRNTAAYALL-TLHRFKTANGKKLMRKQKLMDAADASG 877
Query: 157 LSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAA 216
LSH I PEKGKGK G+S R+WYSGWSCM LI KGLVVK S PAKYMLT GR A
Sbjct: 878 LSHVSIAPEKGKGKAG-LGTSKREWYSGWSCMSKLIEKGLVVKFSNPAKYMLTVEGRNVA 936
Query: 217 RECLSRSGFADSI 229
+ RS SI
Sbjct: 937 DDLDPRSRGQSSI 949
Score = 124 (48.7 bits), Expect = 2.5e-121, Sum P(4) = 2.5e-121
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 342 ASRTCIST--NDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSR 393
A + C S+ +D + + +PPL FGE FE+ Y+V+LILDDREQFA +G +
Sbjct: 991 ALKACSSSLASDGTEGVTTIPRLPPLRFGEAFEEVYDVILILDDREQFATKGHK 1044
Score = 55 (24.4 bits), Expect = 2.5e-121, Sum P(4) = 2.5e-121
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 16 VCAENEELAMYMLQKRQE 33
+C +N+ LA Y+LQK+QE
Sbjct: 1 MCPKNQGLADYVLQKKQE 18
>POMBASE|SPCC4G3.05c [details] [associations]
symbol:mus81 "Holliday junction resolvase subunit Mus81"
species:4896 "Schizosaccharomyces pombe" [GO:0000709 "meiotic joint
molecule formation" evidence=TAS] [GO:0000711 "meiotic DNA repair
synthesis" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006301
"postreplication repair" evidence=TAS] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0008821 "crossover
junction endodeoxyribonuclease activity" evidence=IDA] [GO:0031297
"replication fork processing" evidence=TAS] [GO:0031573 "intra-S
DNA damage checkpoint" evidence=IDA] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048476 "Holliday junction resolvase
complex" evidence=IDA] InterPro:IPR006166 InterPro:IPR010996
InterPro:IPR020819 Pfam:PF02732 SMART:SM00891 PomBase:SPCC4G3.05c
GO:GO:0005739 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0046872 GO:GO:0003677 InterPro:IPR011335 SUPFAM:SSF52980
GO:GO:0033314 GO:GO:0031297 GO:GO:0006301 GO:GO:0031573
GO:GO:0008821 GO:GO:0000709 SUPFAM:SSF47802 GO:GO:0048476
eggNOG:COG1948 Gene3D:3.40.50.10130 KO:K08991 OMA:REVANEC
HOGENOM:HOG000198700 OrthoDB:EOG47DDQX PIR:T41371
RefSeq:XP_001713161.1 ProteinModelPortal:P87231 MINT:MINT-4692881
STRING:P87231 EnsemblFungi:SPCC4G3.05c.1 GeneID:2539004
KEGG:spo:SPCC4G3.05c NextBio:20800179 GO:GO:0000711 Uniprot:P87231
Length = 608
Score = 254 (94.5 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 53/152 (34%), Positives = 90/152 (59%)
Query: 377 VVLILDDREQFAVQGSRSRR-IIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLD 435
V L++D RE ++ R II+ + + F + +VR L +GD +W+AR ++ E VLD
Sbjct: 330 VFLLIDTRE---IRSPLDRNLIIDKLTNDFGVNCQVRSLELGDALWVARDMESGQEVVLD 386
Query: 436 FIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAESIKTACFTTE 495
F+VERK+ DDL +SI+D R+ +QK RL + G++ + Y++E ESI+TA T+
Sbjct: 387 FVVERKRYDDLVASIKDGRFHEQKARLKKSGIRSVTYILEESSYDESFTESIRTAVSNTQ 446
Query: 496 ILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
+ + F V+ T L ++ +T+ I +Y+
Sbjct: 447 VDQLFHVRHTRSLEHSVSLLAEMTKQINLFYE 478
Score = 133 (51.9 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 57/212 (26%), Positives = 90/212 (42%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y+P S AY++L LY N +EF K ++ A+ P FGS
Sbjct: 118 YVPSYRSGAYSILCALYM--LNKHEFATKPQIVTMAQ-------PYCDSS-------FGS 161
Query: 177 SP-RDW-YSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIE---- 230
+ R+ Y+ WS MKTLITK LV ++ P+KY LT G E C+ + DS +
Sbjct: 162 ATDRNMRYTAWSAMKTLITKNLVYQTGHPSKYCLTDDGEEV---CIRLAKVDDSFQRKHT 218
Query: 231 ----NVVNGKDSDK------NELSELDLVLAHPDSNGEVTECFVPLSRKEKS----TDVP 276
+V D D N ++ ++ + D GE+ + P+ E S TD+
Sbjct: 219 VSNFSVSKSDDHDSSLCQPPNFVTSINKAGSSSDHGGELHVTYCPVDHNEVSDGVETDID 278
Query: 277 FESLERFTRMGYSKEQVLRAFGEVSETSQHKE 308
+ ++ T G ++ + T Q K+
Sbjct: 279 VDQVDSLT--GIHDHHIINNEQLIDLTEQEKK 308
Score = 68 (29.0 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 557 MTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAY 595
+TV D+F LM + ++ AI + YPT + L AY
Sbjct: 529 LTVGDIFIRMLMTIKGISASKAIEIQKKYPTFMHLFEAY 567
>SGD|S000002794 [details] [associations]
symbol:MUS81 "Subunit of the structure-specific Mms4p-Mus81p
endonuclease that clea" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008821 "crossover junction
endodeoxyribonuclease activity" evidence=IDA] [GO:0048476 "Holliday
junction resolvase complex" evidence=IDA] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IMP] [GO:0006265 "DNA topological
change" evidence=IGI] [GO:0004519 "endonuclease activity"
evidence=IEA;IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IGI] [GO:0006281 "DNA repair" evidence=IEA;IGI]
[GO:0005634 "nucleus" evidence=IEA;IMP;IPI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IGI]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR006166
InterPro:IPR020819 Pfam:PF02732 SMART:SM00891 SGD:S000002794
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
EMBL:BK006938 InterPro:IPR011335 SUPFAM:SSF52980 EMBL:U32274
GO:GO:0008821 GO:GO:0000712 GO:GO:0048476 GO:GO:0006265
eggNOG:COG1948 Gene3D:3.40.50.10130 KO:K08991 OMA:REVANEC
OrthoDB:EOG47DDQX GeneTree:ENSGT00390000005498 PIR:S69670
RefSeq:NP_010674.3 RefSeq:NP_010678.3 ProteinModelPortal:Q04149
SMR:Q04149 DIP:DIP-1009N IntAct:Q04149 MINT:MINT-406845
STRING:Q04149 PaxDb:Q04149 PeptideAtlas:Q04149 PRIDE:Q04149
EnsemblFungi:YDR386W GeneID:851994 GeneID:851998 KEGG:sce:YDR386W
KEGG:sce:YDR390C CYGD:YDR386w HOGENOM:HOG000248281 KO:K10685
NextBio:970166 Genevestigator:Q04149 GermOnline:YDR386W
Uniprot:Q04149
Length = 632
Score = 221 (82.9 bits), Expect = 8.1e-25, Sum P(4) = 8.1e-25
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVL 434
+EV I+D RE ++ R + ++ E+R+L +GD IW+A+++ T + VL
Sbjct: 348 FEVFPIIDHRE---IKSQSDREFFSRAFERKGMKSEIRQLALGDIIWVAKNKNTGLQCVL 404
Query: 435 DFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEG--DPNSSEAAESIKTACF 492
+ IVERK++DDL SIRDNR+ +QK RL + G + YL+E N E++KTA +
Sbjct: 405 NTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIEETMSGNIGNMNEALKTALW 464
Query: 493 TTEILEGFDVQRTSGLADTLRKYGYITQAITEYY 526
+ F + RT +T+ K + I+ +Y
Sbjct: 465 VILVYYKFSMIRTCNSDETVEKIHALHTVISHHY 498
Score = 95 (38.5 bits), Expect = 8.1e-25, Sum P(4) = 8.1e-25
Identities = 44/174 (25%), Positives = 71/174 (40%)
Query: 116 RYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFG 175
+Y+P++ S YA+L++L ++Q + A + S TP F
Sbjct: 131 KYIPKKRSGGYAILLSLLELNAIPRGVSKEQIIEVAGKYSDHCMTP-----------NF- 178
Query: 176 SSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNG 235
S +++Y WS + L LV++ P +Y LT G E + + G + EN
Sbjct: 179 -STKEFYGAWSSIAALKKHSLVLEEGRPKRYSLTEEGVELTKSLKTADGISFPKENEEPN 237
Query: 236 KDS-DKNELSELDLVLAHPDSNGEVTECFVPLSRKEKS--TDVPFESLERFTRM 286
+ S +NE SE L D GE + P S D+ F+ L R+
Sbjct: 238 EYSVTRNESSEFTANLT--DLRGEYGKEEEPCDINNTSFMLDITFQDLSTPQRL 289
Score = 68 (29.0 bits), Expect = 8.1e-25, Sum P(4) = 8.1e-25
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 32 QEMAE--TPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQVKGVGKWILK 81
QE+ + TPK E + + KA N+ +A+ DL +VKG+G I+K
Sbjct: 16 QELVDGLTPK--QEQLKIAYEKAKRNLQNAEGSFYYPTDLKKVKGIGNTIIK 65
Score = 59 (25.8 bits), Expect = 8.1e-25, Sum P(4) = 8.1e-25
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 555 DKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEE 607
D TV ++ LM V ++ E A+ + +++PTL + AY C+ EE
Sbjct: 551 DLKTVGELTIHVLMLVKGISLEKAVAIQEIFPTLNKILMAYK-----TCSSEE 598
Score = 53 (23.7 bits), Expect = 1.5e-20, Sum P(4) = 1.5e-20
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 228 SIENVVNGKDSDKNELSELDLVLAHPDSNGEVTECFVPLSRKEK-STDVPFESLERFTRM 286
++ ++VN ++DKNE E + T ++P R + + L R
Sbjct: 103 ALRSIVNSCENDKNEAPE------EKGTKKRKTRKYIPKKRSGGYAILLSLLELNAIPR- 155
Query: 287 GYSKEQVLRAFGEVSE 302
G SKEQ++ G+ S+
Sbjct: 156 GVSKEQIIEVAGKYSD 171
>ASPGD|ASPL0000038580 [details] [associations]
symbol:AN3118 species:162425 "Emericella nidulans"
[GO:0033314 "mitotic DNA replication checkpoint" evidence=IEA]
[GO:0031573 "intra-S DNA damage checkpoint" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0000711 "meiotic DNA repair synthesis" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0048476
"Holliday junction resolvase complex" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity" evidence=IEA]
InterPro:IPR006166 InterPro:IPR010996 InterPro:IPR020819
Pfam:PF02732 SMART:SM00891 GO:GO:0005634 GO:GO:0007126
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0006310 GO:GO:0090305 InterPro:IPR011335
SUPFAM:SSF52980 GO:GO:0004519 SUPFAM:SSF47802 eggNOG:COG1948
Gene3D:3.40.50.10130 KO:K08991 RefSeq:XP_660722.1
ProteinModelPortal:Q5B8L2 STRING:Q5B8L2
EnsemblFungi:CADANIAT00009958 GeneID:2874172 KEGG:ani:AN3118.2
HOGENOM:HOG000198700 OMA:TAWNSMK OrthoDB:EOG47DDQX Uniprot:Q5B8L2
Length = 677
Score = 241 (89.9 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 66/177 (37%), Positives = 97/177 (54%)
Query: 373 DAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIAR-HRQT--- 428
D + V LILD RE V+ S+ R I N + I EVR L VGD +W+A+ H T
Sbjct: 362 DNFTVQLILDTRE---VRTSKDRDYISNELIRKGITPEVRALEVGDTMWVAKFHDPTFLR 418
Query: 429 -----QSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEG------D 477
E +LD+IVERK++DDL SI+D R+ +QK RL R G+K +IYL+E +
Sbjct: 419 KYGEEGDEIMLDWIVERKRLDDLIGSIKDGRFHEQKFRLRRSGIKNVIYLIEEFAVTHHE 478
Query: 478 PNSSEAA---ESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELP 531
N++ A + + +A T+++ G+ V+RT L DT+R +T + Y P
Sbjct: 479 SNAAAAQKYHDMVASAIAQTQVVNGYFVKRTKNLDDTIRYLARMTFLLRNMYSAPSP 535
Score = 99 (39.9 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P S +AL++ L N N+ M K +LI+ A+ S + P S
Sbjct: 194 YAPALRSGPFALILALSSLDENSNQSMTKAELIEKAQPYCDSSFTV--------P----S 241
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAK-YMLTPGGREAARECLSRSGFADSIENVV 233
P +++ W+ MK L+TK LV P K Y LT G E A+ + ++ SI+N +
Sbjct: 242 DPTKFFTAWNSMKILLTKELVYTRGHPLKKYSLTEEGWEVAK-AIKKTA-QKSIQNTL 297
Score = 55 (24.4 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 544 FDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVC 603
F F D +T+ D+F LM V+ + A+ + ++PT + A+ L D
Sbjct: 582 FPTFCAIASKSDALTLRDIFLKMLMCTKGVSGDKALEIQRVWPTPQAFIRAFEELT-DPK 640
Query: 604 AQEEML 609
+E M+
Sbjct: 641 QKENMV 646
>ZFIN|ZDB-GENE-040426-2923 [details] [associations]
symbol:mus81 "MUS81 endonuclease homolog (yeast)"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR003583
InterPro:IPR006166 InterPro:IPR010996 InterPro:IPR020819
Pfam:PF02732 SMART:SM00278 SMART:SM00891 ZFIN:ZDB-GENE-040426-2923
GO:GO:0003677 GO:GO:0006281 GO:GO:0090305 InterPro:IPR011335
SUPFAM:SSF52980 GO:GO:0004518 SUPFAM:SSF47802 Gene3D:3.40.50.10130
HOVERGEN:HBG052538 OMA:CGRLQRN GeneTree:ENSGT00390000005498
EMBL:CR339062 EMBL:BC074026 EMBL:BC164793 IPI:IPI00508855
UniGene:Dr.977 SMR:Q6GML8 STRING:Q6GML8 Ensembl:ENSDART00000100782
InParanoid:Q6GML8 Uniprot:Q6GML8
Length = 612
Score = 232 (86.7 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 62/167 (37%), Positives = 94/167 (56%)
Query: 374 AYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQ---- 429
+Y++VL +D E R + +++ + + + +VR+L VGD +W+AR R T
Sbjct: 318 SYDIVLCVDLCETTGGSSVRKQELVKEL-QRNSVTFDVRKLNVGDFLWVARERVTPVPGQ 376
Query: 430 ------SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEA 483
E VLD+I+ERK++DDL SI D R+R+QK RL RCGL+K IYLVE + S+ A
Sbjct: 377 LRPPVGKELVLDYIIERKRMDDLCGSIIDGRFREQKFRLKRCGLRKPIYLVE-ECGSAAA 435
Query: 484 AESI-----KTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEY 525
SI + A T++++GF V+R D Y+T +T Y
Sbjct: 436 HLSIPESTLQQAIVNTQVVDGFFVKRVQ---DAKESAAYLT-IMTRY 478
Score = 109 (43.4 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 39/104 (37%), Positives = 54/104 (51%)
Query: 117 YMPQRNSVAYALLITLYRGTTN-GNE-FMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQF 174
Y+PQ+ S YA+L+TLYR G++ FM + +L A+ P+ EK P
Sbjct: 146 YVPQKRSGGYAVLLTLYRHIQMPGSKGFMFRNELQTEAQ-------PLC-EKSFTVP-DL 196
Query: 175 GSSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARE 218
GS Y+ WS + TLI K LV K+ PA+Y LT G A +
Sbjct: 197 GSK----YTAWSSVSTLIQKELV-KTHNPARYSLTDQGLSLAEK 235
Score = 85 (35.0 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 486 SIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKV--------ELPED---- 533
+++ A T++++GF V+R ++ +T+ + + Y+ EL D
Sbjct: 443 TLQQAIVNTQVVDGFFVKRVQDAKESAAYLTIMTRYLQKLYQNCTLFCRSRELEGDGEAE 502
Query: 534 ------QLKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPT 587
L C+ + F EF TV +VFA QLMQ+ V+ + A VL+ Y T
Sbjct: 503 SEKMVANLSCSLMA--FTEFNYGAIKNKCQTVREVFARQLMQISGVSGDKAAAVLEHYST 560
Query: 588 LLSLAHAYSILEGDVCAQE 606
+ SL AY D C+ E
Sbjct: 561 VSSLLQAY-----DKCSSE 574
Score = 49 (22.3 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 12 KRRVVCAENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQ 71
KR + N ++ + R E KGL KA N++ P+K K+
Sbjct: 11 KRPLPSCPNPLFLQWLTELRDSAKE--KGLKTQF--VYQKAINSLKKYPLPLKNGKEAKI 66
Query: 72 VKGVGKWILKLMQE 85
++ G I K++ E
Sbjct: 67 LQNFGDGICKILDE 80
Score = 48 (22.0 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 44/214 (20%), Positives = 84/214 (39%)
Query: 141 EFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKS 200
E +K+ L + +E + L+ + EKG K R++ R G++ + TL + + +
Sbjct: 113 EESQKEPLGNFSEHTKLTQKEVRKEKGAKKKREYVPQKRS--GGYAVLLTLY-RHIQMPG 169
Query: 201 SCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSDKNELSELDLVLAHPDSNGEVT 260
S +M + A+ +S + + S + L + +LV H + +T
Sbjct: 170 S--KGFMFRNELQTEAQPLCEKSFTVPDLGSKYTAWSS-VSTLIQKELVKTHNPARYSLT 226
Query: 261 ECFVPLSRKEKSTDVPFESLERFTRMGYSKEQVLRAFGEVSETSQHKEISSLWPAVLCRL 320
+ + L+ K S + +L + V E E + + SS PAV L
Sbjct: 227 DQGLSLAEKLDSEETG--TLHEDVDSQDGQNVVDLTLEEEDEDEEKESWSSERPAVA--L 282
Query: 321 QEDEVYALHSELHSV-REDYDAASRTCISTNDDP 353
++ L SEL + + RT + + P
Sbjct: 283 PVNQARGLSSELDPMGKSQTSETGRTAMGWHLSP 316
>DICTYBASE|DDB_G0284175 [details] [associations]
symbol:DDB_G0284175 "putative crossover junction
endonuclease" species:44689 "Dictyostelium discoideum" [GO:0090305
"nucleic acid phosphodiester bond hydrolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR006166
InterPro:IPR007527 InterPro:IPR010996 InterPro:IPR020819
Pfam:PF02732 PROSITE:PS50966 SMART:SM00891 dictyBase:DDB_G0284175
GO:GO:0003677 GO:GO:0006259 GO:GO:0008270 EMBL:AAFI02000063
Gene3D:1.10.150.50 InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0090305
InterPro:IPR011335 SUPFAM:SSF52980 GO:GO:0004518 SUPFAM:SSF47802
eggNOG:COG1948 Gene3D:3.40.50.10130 KO:K08991
ProtClustDB:CLSZ2846730 RefSeq:XP_638710.1
ProteinModelPortal:Q54Q14 EnsemblProtists:DDB0305296 GeneID:8624454
KEGG:ddi:DDB_G0284175 InParanoid:Q54Q14 OMA:PIGDFIF Uniprot:Q54Q14
Length = 921
Score = 195 (73.7 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 63/185 (34%), Positives = 100/185 (54%)
Query: 431 EYVLDFIVERKKVDDLRSSIRDNRYRDQKLR---LVRCGLKKLIYLVEGDPNSSEAAES- 486
E + D I+ERKK+ DL SS +D RYR+QK R L + GL IYL+EGD NS+ A +
Sbjct: 699 ELMYDIIIERKKLADLVSSRKDGRYREQKQRIKTLKKFGLTNAIYLIEGD-NSNGAIHTD 757
Query: 487 -IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKCAAVCPPFD 545
+ + T I + F VQ T GL D ++Y + +++K + + + + F
Sbjct: 758 IYEDSIMETLIEDEFIVQLTDGL-DLTKEY---LLNLYDHFK----KSKYRSLSTLR-FA 808
Query: 546 EFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDV-CA 604
++ + Q M + D+FA+QL+Q+ VT A +++ YPT L AY+ L ++ +
Sbjct: 809 DYEQIQQVSCSMKLKDLFALQLLQIDGVTPPKAKAIINKYPTPRHLVEAYNNLINEIETS 868
Query: 605 QEEML 609
EE L
Sbjct: 869 DEETL 873
Score = 105 (42.0 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 41/128 (32%), Positives = 57/128 (44%)
Query: 117 YMPQRNSVAYALLITLYRGT-TNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFG 175
Y P S A+A+L+ LY +NGN+ R + + E LS+ G +
Sbjct: 357 YTPAHRSGAWAILLALYDNEISNGNDNDRGKRYLLKEEI--LSN-------GN---KYLS 404
Query: 176 SSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNG 235
S D W KTLI L+ KS P +++LT G E AR+ S F DS + N
Sbjct: 405 SGRMDTGGHWLSNKTLIDHNLISKSGSPLQFILTKTGYELARKLKS---FEDSSTDNKNK 461
Query: 236 KDSDKNEL 243
D D N +
Sbjct: 462 DDCDNNNI 469
Score = 86 (35.3 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 362 VPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIW 421
V L + ER V+LI+D+RE V +++ + S IQ+E+R+LP+GD I+
Sbjct: 601 VKELLYNEREVIIDNVLLIVDNRE---VMDKDQSDLLDKLRSS-NIQLEIRKLPIGDFIF 656
Query: 422 IARHR 426
IA+ R
Sbjct: 657 IAKCR 661
Score = 45 (20.9 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 42 SENIDMTLSKAYNNICDAKNPIKTLKDLSQVKGVGKWILKLMQEFFETDSGGS 94
S + L A ++I P+KT D+ ++G G I+ ++ + +++ +
Sbjct: 21 SYHFQRNLKVAIDSIKLYPMPLKTKDDIKLLRGCGPTIVDIIFQIIQSNKNNN 73
Score = 38 (18.4 bits), Expect = 1.7e-15, Sum P(4) = 1.7e-15
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 284 TRMGYSKEQVLRAFGEVSETSQHKE 308
T+ GY + L++F + S +++K+
Sbjct: 438 TKTGYELARKLKSFEDSSTDNKNKD 462
>UNIPROTKB|G4MSU8 [details] [associations]
symbol:MGG_04585 "Crossover junction endonuclease MUS81"
species:242507 "Magnaporthe oryzae 70-15" [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR006166 InterPro:IPR010996
InterPro:IPR020819 Pfam:PF02732 SMART:SM00891 GO:GO:0009405
GO:GO:0003677 GO:GO:0006259 GO:GO:0090305 InterPro:IPR011335
SUPFAM:SSF52980 GO:GO:0004519 EMBL:CM001232 SUPFAM:SSF47802
Gene3D:3.40.50.10130 KO:K08991 RefSeq:XP_003713609.1
ProteinModelPortal:G4MSU8 EnsemblFungi:MGG_04585T0 GeneID:2678112
KEGG:mgr:MGG_04585 Uniprot:G4MSU8
Length = 594
Score = 227 (85.0 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 56/170 (32%), Positives = 101/170 (59%)
Query: 374 AYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIAR-------HR 426
+++V L+LD RE ++ + R +++ +Q + +R L +GD IW+A+ +R
Sbjct: 283 SFQVHLVLDVRE---IRTKKDRDYMKDQLTQKGVTPIMRSLALGDAIWVAKCTDPTLLNR 339
Query: 427 -----QTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEG---DP 478
+ +E VLD+I ERK++DDL SS++D R+ +QK RL R GL+ +IY+VE D
Sbjct: 340 AGVEGEEGNEIVLDYIAERKRLDDLISSVKDGRFHEQKFRLRRSGLRNVIYIVEDFSLDT 399
Query: 479 -NSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
NSS E +++A +T+++ G+ ++RT + DT+ +T+ + Y+
Sbjct: 400 LNSSRYEEMVQSAMASTQVVNGYFLKRTQKMDDTVTYLARLTKLLKSQYE 449
Score = 96 (38.9 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 33/101 (32%), Positives = 44/101 (43%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y+P S AYAL++ L + K DLID A+ H + G
Sbjct: 117 YVPAYKSGAYALIMALSTLDEQAQVGLSKADLIDIAQP----HC--------NASFKVGE 164
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAK-YMLTPGGREAA 216
+Y+ W+ MKTL+ K LV + P K Y LT G E A
Sbjct: 165 DAASFYTAWNSMKTLLQKELVYERGRPTKRYALTDEGWEVA 205
Score = 55 (24.4 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 544 FDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAY 595
+ F D +T+ DVF LM +T E A+ + + T L AY
Sbjct: 498 YPAFASLASKSDMITLRDVFLKMLMCTKGITGEKAMEIQKRWKTPLEFVKAY 549
>UNIPROTKB|E1B8J2 [details] [associations]
symbol:MUS81 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048257 "3'-flap endonuclease activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003583 InterPro:IPR006166
InterPro:IPR010996 InterPro:IPR020819 Pfam:PF02732 SMART:SM00278
SMART:SM00891 GO:GO:0003677 GO:GO:0006281 GO:GO:0090305
InterPro:IPR011335 SUPFAM:SSF52980 SUPFAM:SSF47802
Gene3D:3.40.50.10130 OMA:CGRLQRN GO:GO:0048257
GeneTree:ENSGT00390000005498 EMBL:DAAA02063574 IPI:IPI00905562
Ensembl:ENSBTAT00000053203 ArrayExpress:E1B8J2 Uniprot:E1B8J2
Length = 552
Score = 234 (87.4 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 61/172 (35%), Positives = 94/172 (54%)
Query: 364 PLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIA 423
PL G Y V+L +D E +G+ R + + + VR+L VGD +W+A
Sbjct: 260 PLELGP---GEYRVLLCVDVGE---TKGAGHRPELLRELRRLHVAHTVRKLHVGDFVWVA 313
Query: 424 RHRQTQ-----SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--G 476
+ + +E VLD IVERK++DDL SSI D R+R+QK RL RCGL + +YLVE G
Sbjct: 314 QETSPRDPARPAELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGRRVYLVEEHG 373
Query: 477 DPNSSEAAES-IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
S ES + A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 374 SARSLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQ 425
Score = 101 (40.6 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A A+L+ LYR N + Q + E P +P G R
Sbjct: 130 YWPARHSGARAVLLQLYREHLNPSG----QGFLTKEELLQRC-APKVPRVAPGSAR---- 180
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
P W +++L+ + LV+++ PA+Y LTP G E A++ G + NV +G
Sbjct: 181 -P------WPALRSLLHRNLVLRTHQPARYSLTPQGLELAQKLADSEGLG--LLNVGSGP 231
Query: 237 DSDKNELSEL 246
+ + E E+
Sbjct: 232 EEPRGEEPEV 241
Score = 98 (39.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 451 RDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAES-IKTACFTTEILEGFDVQRTSGLA 509
R+ ++R ++ L G + + G S ES + A T++++GF V+RT+ +
Sbjct: 351 REQKFRLKRCGL---GRRVYLVEEHGSARSLSLPESTLLQAVTNTQVIDGFFVKRTADIK 407
Query: 510 DTLRKYGYITQAITEYYKVEL-----------PEDQLKCAA--VCP--PFDEFLKRCQDL 554
++ +T+ + Y+ PE + + + +C F +F
Sbjct: 408 ESAAYLALLTRGLQRLYQGHTLRSRPWGTSGDPESKARPSPNPLCSLLTFSDFNAGAMKN 467
Query: 555 DKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCA---QEEML 609
+V DVFA QLMQV V+ E A ++ Y + SL AY D CA ++EML
Sbjct: 468 KAQSVRDVFARQLMQVRGVSGEKAAALVARYSSPASLLAAY-----DACATPKEQEML 520
>UNIPROTKB|H0YDE3 [details] [associations]
symbol:MUS81 "Crossover junction endonuclease MUS81"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR006166
InterPro:IPR010996 InterPro:IPR020819 Pfam:PF02732 SMART:SM00891
GO:GO:0003677 GO:GO:0006259 GO:GO:0090305 InterPro:IPR011335
SUPFAM:SSF52980 EMBL:AP001266 GO:GO:0004518 EMBL:AP001201
SUPFAM:SSF47802 Gene3D:3.40.50.10130 HGNC:HGNC:29814
Ensembl:ENST00000524647 Uniprot:H0YDE3
Length = 389
Score = 232 (86.7 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 57/161 (35%), Positives = 91/161 (56%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQS---- 430
Y V+L +D E +G R + + + VR+L VGD +W+A+ +
Sbjct: 232 YRVLLCVDIGE---TRGGGHRPELLRELQRLHVTHTVRKLHVGDFVWVAQETNPRDPANP 288
Query: 431 -EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--GDPNSSEAAES- 486
E VLD IVERK++DDL SSI D R+R+QK RL RCGL++ +YLVE G ++ ES
Sbjct: 289 GELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLERRVYLVEEHGSVHNLSLPEST 348
Query: 487 IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
+ A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 349 LLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQ 389
Score = 93 (37.8 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 35/126 (27%), Positives = 54/126 (42%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A +L+ LYR N N L+ ++ + PR
Sbjct: 95 YWPARHSGARVILLVLYREHLNPNGH------------HFLTKEELLQRCAQKSPRVAPG 142
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
S R W +++L+ + LV+++ PA+Y LTP G E A++ G S+ NV G
Sbjct: 143 SARPW----PALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGL--SLLNVGIGP 196
Query: 237 DSDKNE 242
E
Sbjct: 197 KEPPGE 202
>UNIPROTKB|H0YDU2 [details] [associations]
symbol:MUS81 "Crossover junction endonuclease MUS81"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR006166
InterPro:IPR020819 Pfam:PF02732 SMART:SM00891 GO:GO:0003677
GO:GO:0006259 GO:GO:0090305 InterPro:IPR011335 SUPFAM:SSF52980
EMBL:AP001266 GO:GO:0004518 EMBL:AP001201 Gene3D:3.40.50.10130
HGNC:HGNC:29814 Ensembl:ENST00000529374 Uniprot:H0YDU2
Length = 411
Score = 230 (86.0 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 57/162 (35%), Positives = 91/162 (56%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQS---- 430
Y V+L +D E +G R + + + VR+L VGD +W+A+ +
Sbjct: 192 YRVLLCVDIGE---TRGGGHRPELLRELQRLHVTHTVRKLHVGDFVWVAQETNPRDPAAN 248
Query: 431 --EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--GDPNSSEAAES 486
E VLD IVERK++DDL SSI D R+R+QK RL RCGL++ +YLVE G ++ ES
Sbjct: 249 PGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLERRVYLVEEHGSVHNLSLPES 308
Query: 487 -IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
+ A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 309 TLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQ 350
Score = 93 (37.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 35/126 (27%), Positives = 54/126 (42%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A +L+ LYR N N L+ ++ + PR
Sbjct: 55 YWPARHSGARVILLVLYREHLNPNGH------------HFLTKEELLQRCAQKSPRVAPG 102
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
S R W +++L+ + LV+++ PA+Y LTP G E A++ G S+ NV G
Sbjct: 103 SARPW----PALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGL--SLLNVGIGP 156
Query: 237 DSDKNE 242
E
Sbjct: 157 KEPPGE 162
>FB|FBgn0040347 [details] [associations]
symbol:mus81 "mus81" species:7227 "Drosophila melanogaster"
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=NAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=NAS] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR006166 InterPro:IPR010996
InterPro:IPR020819 Pfam:PF02732 SMART:SM00891 GO:GO:0007095
GO:GO:0003677 GO:GO:0006259 EMBL:AE014298 GO:GO:0090305
InterPro:IPR011335 SUPFAM:SSF52980 GO:GO:0008821 SUPFAM:SSF47802
eggNOG:COG1948 Gene3D:3.40.50.10130 EMBL:AL109630 KO:K08991
CTD:80198 GeneTree:ENSGT00390000005498 EMBL:AY061067
RefSeq:NP_569873.1 UniGene:Dm.48 SMR:Q9V3T1 IntAct:Q9V3T1
MINT:MINT-4080308 STRING:Q9V3T1 EnsemblMetazoa:FBtr0070170
GeneID:31044 KEGG:dme:Dmel_CG3026 UCSC:CG3026-RA
FlyBase:FBgn0040347 InParanoid:Q9V3T1 OMA:FHEQKHR OrthoDB:EOG4V6WZ9
GenomeRNAi:31044 NextBio:771662 Uniprot:Q9V3T1
Length = 426
Score = 276 (102.2 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 101/336 (30%), Positives = 165/336 (49%)
Query: 293 VLRAFGE-----VSETSQHKEISSLWP--AVLCRLQEDEVYALHSELHSVREDYDAASRT 345
+LR FG + E +H L P AV+ E +V A+ ++ + ++
Sbjct: 60 ILRGFGGTLCQLIDEELRHHRGLQLLPQEAVVQERYEQQVQAVVRKVQEKQLEHQKRQNK 119
Query: 346 CISTNDDPK--TRVNLLSVPPLSFGERF----EDAYEVVLILDDREQFAVQGSRSRRIIE 399
C D P+ T+ +L + L ER ++++L++D +E +++R+++
Sbjct: 120 C----DRPRKLTKKDLAELAALEERERVVRMKPGQFQLLLLVDTQET----SGKNKRVLD 171
Query: 400 NVCSQFK---IQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYR 456
S + + EVRRL +GD +W+A+ Q +E VL +IVERK++DDL SSIRD R+
Sbjct: 172 QTRSYLESLGARHEVRRLTIGDFLWVAQD-QEGNELVLPYIVERKRMDDLASSIRDGRFH 230
Query: 457 DQKLRLVRCGLKKLIYLVE--GDPNS-SEAAESIKTACFTTEILEGFDVQRTSG------ 507
+QK RL CGL+ +IYLVE GD +S++ A ++ G V RT+
Sbjct: 231 EQKHRLQHCGLQHIIYLVEDYGDNEQLGLPLDSLQQALTNAKVQTGVRVVRTANHYRSMS 290
Query: 508 -LADTLRKYGYITQAITEYYKVELPE-DQLKCAAVCPPFD--EFLKRCQDLDK---MTVS 560
LA R G I A + + V+ DQ C +F +D K +TV
Sbjct: 291 YLAGMSRTLGQIF-AGKKLHSVDRGAIDQSTCLLTHSDLGLLKFRALYEDSAKNAQLTVR 349
Query: 561 DVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYS 596
+VF QL+Q+ ++ E A+ +++ YPT L AY+
Sbjct: 350 EVFVQQLLQLHSLSLERAMAIVERYPTPRWLLDAYA 385
Score = 38 (18.4 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 11 SKRRVVCAENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLS 70
++ V+ E L L++ AE + S+ +L +A ++ P+ + +D S
Sbjct: 3 TRLEVLLREPNPLFTRWLERWLREAERREQKSQ---FSLRQALESLKSYPLPLASGRDCS 59
Query: 71 QVKGVGKWILKLMQE 85
++G G + +L+ E
Sbjct: 60 ILRGFGGTLCQLIDE 74
>UNIPROTKB|E9PRI1 [details] [associations]
symbol:MUS81 "Crossover junction endonuclease MUS81"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR003583 InterPro:IPR006166
InterPro:IPR020819 Pfam:PF02732 SMART:SM00278 SMART:SM00891
GO:GO:0003677 GO:GO:0006281 GO:GO:0090305 InterPro:IPR011335
SUPFAM:SSF52980 EMBL:AP001266 GO:GO:0004518 EMBL:AP001201
Gene3D:3.40.50.10130 HGNC:HGNC:29814 IPI:IPI00984384
ProteinModelPortal:E9PRI1 SMR:E9PRI1 Ensembl:ENST00000533035
ArrayExpress:E9PRI1 Bgee:E9PRI1 Uniprot:E9PRI1
Length = 476
Score = 232 (86.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 57/161 (35%), Positives = 91/161 (56%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQS---- 430
Y V+L +D E +G R + + + VR+L VGD +W+A+ +
Sbjct: 192 YRVLLCVDIGE---TRGGGHRPELLRELQRLHVTHTVRKLHVGDFVWVAQETNPRDPANP 248
Query: 431 -EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--GDPNSSEAAES- 486
E VLD IVERK++DDL SSI D R+R+QK RL RCGL++ +YLVE G ++ ES
Sbjct: 249 GELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLERRVYLVEEHGSVHNLSLPEST 308
Query: 487 IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
+ A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 309 LLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQ 349
Score = 93 (37.8 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 35/126 (27%), Positives = 54/126 (42%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A +L+ LYR N N L+ ++ + PR
Sbjct: 55 YWPARHSGARVILLVLYREHLNPNGH------------HFLTKEELLQRCAQKSPRVAPG 102
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
S R W +++L+ + LV+++ PA+Y LTP G E A++ G S+ NV G
Sbjct: 103 SARPW----PALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGL--SLLNVGIGP 156
Query: 237 DSDKNE 242
E
Sbjct: 157 KEPPGE 162
Score = 90 (36.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 39/141 (27%), Positives = 61/141 (43%)
Query: 479 NSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVEL-------- 530
N S ++ A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 301 NLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQGHTLRSRPWGT 360
Query: 531 PEDQLKCAAVCP-P------FDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLD 583
P + A P P F +F +V +VFA QLMQV V+ E A ++D
Sbjct: 361 PGNPESGAMTSPNPLCSLLTFSDFNAGAIKNKAQSVREVFARQLMQVRGVSGEKAAALVD 420
Query: 584 LYPTLLSLAHAYSILEGDVCA 604
Y T SL AY D CA
Sbjct: 421 RYSTPASLLAAY-----DACA 436
>UNIPROTKB|Q96NY9 [details] [associations]
symbol:MUS81 "Crossover junction endonuclease MUS81"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0048257 "3'-flap endonuclease activity"
evidence=IMP] InterPro:IPR003583 InterPro:IPR006166
InterPro:IPR010996 InterPro:IPR020819 Pfam:PF02732 SMART:SM00278
SMART:SM00891 EMBL:AF425646 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 InterPro:IPR011335
SUPFAM:SSF52980 SUPFAM:SSF47802 PDB:2ZIX PDBsum:2ZIX eggNOG:COG1948
Gene3D:3.40.50.10130 KO:K08991 EMBL:BC009999 EMBL:AK024665
IPI:IPI00289454 RefSeq:NP_079404.3 UniGene:Hs.288798
ProteinModelPortal:Q96NY9 SMR:Q96NY9 DIP:DIP-48630N IntAct:Q96NY9
STRING:Q96NY9 PhosphoSite:Q96NY9 DMDM:166898077 PaxDb:Q96NY9
PRIDE:Q96NY9 Ensembl:ENST00000308110 Ensembl:ENST00000437855
GeneID:80198 KEGG:hsa:80198 UCSC:uc001ofv.4 CTD:80198
GeneCards:GC11P065627 H-InvDB:HIX0009809 HGNC:HGNC:29814 MIM:606591
neXtProt:NX_Q96NY9 PharmGKB:PA134881809 HOGENOM:HOG000113699
HOVERGEN:HBG052538 InParanoid:Q96NY9 OMA:CGRLQRN OrthoDB:EOG43TZVC
PhylomeDB:Q96NY9 EvolutionaryTrace:Q96NY9 GenomeRNAi:80198
NextBio:70556 ArrayExpress:Q96NY9 Bgee:Q96NY9 CleanEx:HS_MUS81
Genevestigator:Q96NY9 GermOnline:ENSG00000172732 GO:GO:0048257
Uniprot:Q96NY9
Length = 551
Score = 232 (86.7 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 57/161 (35%), Positives = 91/161 (56%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQS---- 430
Y V+L +D E +G R + + + VR+L VGD +W+A+ +
Sbjct: 267 YRVLLCVDIGE---TRGGGHRPELLRELQRLHVTHTVRKLHVGDFVWVAQETNPRDPANP 323
Query: 431 -EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--GDPNSSEAAES- 486
E VLD IVERK++DDL SSI D R+R+QK RL RCGL++ +YLVE G ++ ES
Sbjct: 324 GELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLERRVYLVEEHGSVHNLSLPEST 383
Query: 487 IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
+ A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 384 LLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQ 424
Score = 93 (37.8 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 35/126 (27%), Positives = 54/126 (42%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A +L+ LYR N N L+ ++ + PR
Sbjct: 130 YWPARHSGARVILLVLYREHLNPNGH------------HFLTKEELLQRCAQKSPRVAPG 177
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
S R W +++L+ + LV+++ PA+Y LTP G E A++ G S+ NV G
Sbjct: 178 SARPW----PALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGL--SLLNVGIGP 231
Query: 237 DSDKNE 242
E
Sbjct: 232 KEPPGE 237
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 39/141 (27%), Positives = 61/141 (43%)
Query: 479 NSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVEL-------- 530
N S ++ A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 376 NLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQGHTLRSRPWGT 435
Query: 531 PEDQLKCAAVCP-P------FDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLD 583
P + A P P F +F +V +VFA QLMQV V+ E A ++D
Sbjct: 436 PGNPESGAMTSPNPLCSLLTFSDFNAGAIKNKAQSVREVFARQLMQVRGVSGEKAAALVD 495
Query: 584 LYPTLLSLAHAYSILEGDVCA 604
Y T SL AY D CA
Sbjct: 496 RYSTPASLLAAY-----DACA 511
>WB|WBGene00016602 [details] [associations]
symbol:mus-81 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] InterPro:IPR003583 InterPro:IPR006166
InterPro:IPR010996 InterPro:IPR020819 Pfam:PF02732 SMART:SM00278
SMART:SM00891 GO:GO:0003677 GO:GO:0006281 GO:GO:0090305
InterPro:IPR011335 SUPFAM:SSF52980 GO:GO:0004518 SUPFAM:SSF47802
eggNOG:COG1948 Gene3D:3.40.50.10130 KO:K08991
GeneTree:ENSGT00390000005498 EMBL:FO080612 PIR:C87754
RefSeq:NP_491341.1 UniGene:Cel.7758 ProteinModelPortal:P91153
SMR:P91153 STRING:P91153 EnsemblMetazoa:C43E11.2a.1
EnsemblMetazoa:C43E11.2a.2 GeneID:172027 KEGG:cel:CELE_C43E11.2
UCSC:C43E11.2a CTD:172027 WormBase:C43E11.2a InParanoid:P91153
OMA:FRANGDD NextBio:873725 ArrayExpress:P91153 Uniprot:P91153
Length = 445
Score = 246 (91.7 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 80/245 (32%), Positives = 120/245 (48%)
Query: 361 SVPPLSFG----ERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPV 416
S PLSF FE V LI D+RE R + +IE++ + I++++R L V
Sbjct: 190 SSDPLSFRLLTCRPFEQP-TVYLIADNREHR--NNPRFKSVIEHLVKKEDIRVDIRSLSV 246
Query: 417 GDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEG 476
GD IWI R + +E V+D++VERK DDL+SSIR RY +QK RL +K +YL+E
Sbjct: 247 GDYIWICR-KIDGTEIVMDWVVERKTWDDLQSSIRGGRYDEQKGRLNMAPMKNRVYLIEA 305
Query: 477 DPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLK 536
A E A +T G+ +QR S DT +T + +E +
Sbjct: 306 QHKGDVACEQ---AVASTLSNGGYLIQRCSDTRDTAAFLKEVTIRLQNKAAIE------E 356
Query: 537 CAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYS 596
+ V PF + Q TV + + QLM P +++ A + D +P+++SL +Y
Sbjct: 357 ISGV--PFSQLQNLLQKKKAETVKEAWVRQLMVCPGMSQNRAEAIADRFPSMVSLL-SYF 413
Query: 597 ILEGD 601
GD
Sbjct: 414 RANGD 418
Score = 71 (30.1 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 7 MENHSKRRVVCAENEELAMY-MLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKT 65
M N SKR V E+ + + + K Q + + L L KA+ N+ I T
Sbjct: 1 MSNQSKRVTVRIEHSKNTFFEKVLKFQHQEQEDRKLK----YVLHKAHENLRKCPFEILT 56
Query: 66 LKDLSQVKGVGKWILKLMQEFFET---DSGGSEP 96
+ DL V+G+G+ I ++E + ++ G +P
Sbjct: 57 IVDLKNVQGIGENIALKLEETWNVACRENNGQDP 90
>RGD|1311957 [details] [associations]
symbol:Mus81 "MUS81 endonuclease homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA;ISO] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048257 "3'-flap endonuclease activity" evidence=IEA;ISO]
InterPro:IPR006166 InterPro:IPR010996 InterPro:IPR020819
Pfam:PF02732 SMART:SM00891 RGD:1311957 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0090305
InterPro:IPR011335 SUPFAM:SSF52980 SUPFAM:SSF47802 eggNOG:COG1948
Gene3D:3.40.50.10130 KO:K08991 CTD:80198 HOGENOM:HOG000113699
HOVERGEN:HBG052538 OMA:CGRLQRN OrthoDB:EOG43TZVC GO:GO:0048257
GeneTree:ENSGT00390000005498 EMBL:BC098853 IPI:IPI00201693
RefSeq:NP_001020816.1 UniGene:Rn.137652 ProteinModelPortal:Q4KM32
SMR:Q4KM32 STRING:Q4KM32 PRIDE:Q4KM32 Ensembl:ENSRNOT00000028015
GeneID:293678 KEGG:rno:293678 UCSC:RGD:1311957 InParanoid:Q4KM32
NextBio:636725 Genevestigator:Q4KM32 GermOnline:ENSRNOG00000020617
Uniprot:Q4KM32
Length = 551
Score = 228 (85.3 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 61/161 (37%), Positives = 89/161 (55%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIA---RHRQTQ-- 429
Y V+L +D E G R + E + ++ VR+L VGD +W+A R R +
Sbjct: 267 YRVLLCVDIGETRGA-GHRPEMLRE--LQRLRVPHTVRKLHVGDFVWVAQETRPRDPERP 323
Query: 430 SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--GDPNSSEAAES- 486
E VLD IVERK++DDL SSI D R+R+QK RL RCGL IYLVE G + ES
Sbjct: 324 GELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGHRIYLVEEHGSVQNLSLPEST 383
Query: 487 IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
+ A T++++GF V+RT + ++ +T+ + Y+
Sbjct: 384 LLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLERLYQ 424
Score = 94 (38.1 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 479 NSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVEL----P--- 531
N S ++ A T++++GF V+RT + ++ +T+ + Y+ P
Sbjct: 376 NLSLPESTLLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLERLYQGHTLHSRPWGT 435
Query: 532 ----EDQLKCAA--VCP--PFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLD 583
E + K + +C F +F +V +VFA QLMQV ++ E A ++D
Sbjct: 436 PGDAESEAKPSTNPLCSLLTFSDFNAEAVKNKAQSVREVFARQLMQVRGLSGEKAAALVD 495
Query: 584 LYPTLLSLAHAYSILEGDVCA---QEEML 609
Y T SL AY D CA ++EML
Sbjct: 496 RYSTPASLLAAY-----DACATTKEQEML 519
Score = 91 (37.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 35/137 (25%), Positives = 58/137 (42%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P +NS A +L+ LYR N + S L+ ++ + + PR
Sbjct: 130 YWPAQNSGAREILLQLYREHLNSDGH------------SFLTKEELLQKCAQKTPRVVPE 177
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
S R W ++ L+ + LV+++ PA+Y LTP G E A++ G S N
Sbjct: 178 SSRPW----PALRGLLHRNLVLRTHRPARYALTPEGLELAQKLAEAEGL--STLNTAFQP 231
Query: 237 DSDKNELSELDLVLAHP 253
+ E + +L+ P
Sbjct: 232 EEHHEESPVPEAILSEP 248
>UNIPROTKB|E2RNT7 [details] [associations]
symbol:MUS81 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048257 "3'-flap endonuclease activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR006166
InterPro:IPR010996 InterPro:IPR020819 Pfam:PF02732 SMART:SM00891
GO:GO:0003677 GO:GO:0006259 GO:GO:0090305 InterPro:IPR011335
SUPFAM:SSF52980 SUPFAM:SSF47802 Gene3D:3.40.50.10130 KO:K08991
CTD:80198 OMA:CGRLQRN GO:GO:0048257 GeneTree:ENSGT00390000005498
EMBL:AAEX03011632 RefSeq:XP_533230.2 ProteinModelPortal:E2RNT7
Ensembl:ENSCAFT00000020972 GeneID:476021 KEGG:cfa:476021
NextBio:20851753 Uniprot:E2RNT7
Length = 552
Score = 226 (84.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 60/172 (34%), Positives = 93/172 (54%)
Query: 364 PLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIA 423
PL G Y V+L +D E G + + ++E + + VR+L VGD +W+A
Sbjct: 260 PLELGP---GEYRVLLCVDVGEAKGA-GHKPKLLLE--LQRLHVTHVVRKLHVGDFVWVA 313
Query: 424 RHRQTQS-----EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--G 476
+ + + E VLD IVERK++DDL SSI D R+R+QK RL RCGL +YLVE G
Sbjct: 314 QETRPRDPARPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGHRVYLVEEHG 373
Query: 477 DPNSSEAAES-IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
+ ES + A T++++GF V+RT+ + ++ +T + Y+
Sbjct: 374 SAHHLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTLGLQRLYQ 425
Score = 93 (37.8 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A A+L+ LYR + ++ + S L+ ++ + PR
Sbjct: 130 YWPARHSGARAVLLLLYR------------ERLNPSGRSFLTKEELLQRCAQKAPRVALG 177
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFA 226
S R W +++L+ + LV+++ PA+Y LTP G E A++ G +
Sbjct: 178 STRPW----PALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGLS 223
Score = 82 (33.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 44/178 (24%), Positives = 75/178 (42%)
Query: 451 RDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAES-IKTACFTTEILEGFDVQRTSGLA 509
R+ ++R ++ L G + + G + ES + A T++++GF V+RT+ +
Sbjct: 351 REQKFRLKRCGL---GHRVYLVEEHGSAHHLSLPESTLLQAVTNTQVIDGFFVKRTADIK 407
Query: 510 DTLRKYGYITQAITEYYKVEL-----------PEDQLKCAA--VCP--PFDEFLKRCQDL 554
++ +T + Y+ PE + + +C F +F
Sbjct: 408 ESAAYLALLTLGLQRLYQGHTLRSRPWGTSGDPESRPGPSPHPLCSLLTFSDFNAGAMKN 467
Query: 555 DKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCA---QEEML 609
V +VFA QLMQV V+ E A ++ Y T SL AY D C ++EML
Sbjct: 468 KAQCVQEVFARQLMQVRGVSGEKAAAIVGQYSTPASLLAAY-----DACVTPKEQEML 520
>MGI|MGI:1918961 [details] [associations]
symbol:Mus81 "MUS81 endonuclease homolog (yeast)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048257 "3'-flap endonuclease activity" evidence=ISO]
InterPro:IPR006166 InterPro:IPR010996 InterPro:IPR020819
Pfam:PF02732 SMART:SM00891 MGI:MGI:1918961 GO:GO:0005634
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0006310 GO:GO:0090305 InterPro:IPR011335 SUPFAM:SSF52980
SUPFAM:SSF47802 eggNOG:COG1948 Gene3D:3.40.50.10130 KO:K08991
CTD:80198 HOGENOM:HOG000113699 HOVERGEN:HBG052538 OMA:CGRLQRN
OrthoDB:EOG43TZVC GO:GO:0048257 EMBL:AF425647 EMBL:BC026560
IPI:IPI00321329 RefSeq:NP_082153.3 UniGene:Mm.27697 PDB:2KP7
PDBsum:2KP7 ProteinModelPortal:Q91ZJ0 SMR:Q91ZJ0 STRING:Q91ZJ0
PhosphoSite:Q91ZJ0 PRIDE:Q91ZJ0 Ensembl:ENSMUST00000124334
GeneID:71711 KEGG:mmu:71711 UCSC:uc008gdn.2
GeneTree:ENSGT00390000005498 InParanoid:Q91ZJ0
EvolutionaryTrace:Q91ZJ0 NextBio:334299 Bgee:Q91ZJ0
CleanEx:MM_MUS81 Genevestigator:Q91ZJ0
GermOnline:ENSMUSG00000024906 Uniprot:Q91ZJ0
Length = 551
Score = 229 (85.7 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 65/184 (35%), Positives = 97/184 (52%)
Query: 352 DPKTRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEV 411
+P T + PL E Y V+L +D E G R + E + ++ V
Sbjct: 247 EPGTTEGAVQQRPL---ELRPSEYRVLLCVDIGETRGA-GHRPEMLRE--LQRLRVPHTV 300
Query: 412 RRLPVGDGIWIA---RHRQTQ--SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCG 466
R+L VGD +W+A R R + E VLD IVERK++DDL SSI D R+R+QK RL RCG
Sbjct: 301 RKLHVGDFVWVAQETRPRDPERPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCG 360
Query: 467 LKKLIYLVE--GDPNSSEAAES-IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAIT 523
L +YLVE G ++ ES + A T++++GF V+RT + ++ +T+ +
Sbjct: 361 LGHRVYLVEEHGSVHNLSLPESTLLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLE 420
Query: 524 EYYK 527
Y+
Sbjct: 421 RLYQ 424
Score = 97 (39.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 479 NSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVEL----P--- 531
N S ++ A T++++GF V+RT + ++ +T+ + Y+ P
Sbjct: 376 NLSLPESTLLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLERLYQGHTLRSRPWGA 435
Query: 532 ----EDQLKCAA--VCP--PFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLD 583
E + K + +C F +F +V +VFA QLMQV ++ E A V+D
Sbjct: 436 PGAAESEAKPSTNPLCSLLTFSDFNAEAVKNKAQSVREVFARQLMQVRGLSGEKAAAVVD 495
Query: 584 LYPTLLSLAHAYSILEGDVCA---QEEML 609
Y T SL AY D CA ++EML
Sbjct: 496 RYSTPASLLAAY-----DACATAKEQEML 519
Score = 85 (35.0 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P +NS A +L+ LYR N + S L+ ++ + + PR
Sbjct: 130 YWPAQNSGAREILLQLYREHLNSDGH------------SFLTKEELLQKCAQKTPRVVPG 177
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFA 226
S + W +++L+ + L++ + PA+Y LTP G E A++ G +
Sbjct: 178 SSKPW----PALRSLLHRNLILGTHRPARYALTPEGLELAQKLAEAEGLS 223
Score = 42 (19.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 154 ASGLSHTPIMP--EKG--KGKPRQFGSS 177
ASG H P P +KG KG P Q S
Sbjct: 86 ASGGDHAPSSPSGKKGASKGPPEQVQDS 113
>UNIPROTKB|F1RU20 [details] [associations]
symbol:MUS81 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048257 "3'-flap endonuclease activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003583 InterPro:IPR006166
InterPro:IPR010996 InterPro:IPR020819 Pfam:PF02732 SMART:SM00278
SMART:SM00891 GO:GO:0003677 GO:GO:0006281 GO:GO:0090305
InterPro:IPR011335 SUPFAM:SSF52980 SUPFAM:SSF47802
Gene3D:3.40.50.10130 KO:K08991 CTD:80198 OMA:CGRLQRN GO:GO:0048257
GeneTree:ENSGT00390000005498 EMBL:CU856129 RefSeq:XP_003122574.2
Ensembl:ENSSSCT00000014180 GeneID:100511000 KEGG:ssc:100511000
Uniprot:F1RU20
Length = 552
Score = 223 (83.6 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 56/161 (34%), Positives = 89/161 (55%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQS---- 430
Y V+L +D E +G+ R + + ++ VR+L VGD +W+A+ +
Sbjct: 268 YRVLLCVDIGE---TRGAGHRPELLRELQRLRVTHTVRKLHVGDFVWVAQETSPRDPARP 324
Query: 431 -EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--GDPNSSEAAES- 486
E VLD IVERK++DDL SI D R+R+QK RL RCGL +YLVE G + ES
Sbjct: 325 RELVLDHIVERKRLDDLCRSIIDGRFREQKFRLKRCGLGHPVYLVEEHGSGQNLSLPEST 384
Query: 487 IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
+ A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 385 LLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQ 425
Score = 115 (45.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 45/149 (30%), Positives = 69/149 (46%)
Query: 479 NSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVEL-------- 530
N S ++ A T++++GF V+RT+ + ++ +T+ + Y+
Sbjct: 377 NLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQGHTLRSRPWGP 436
Query: 531 PEDQLKCAAVCP-P------FDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLD 583
PED + A P P F+EF +V +VFA QLMQV V+ E A ++D
Sbjct: 437 PEDPVSGAGPPPNPLCSLLTFNEFNTGAMKNKAQSVREVFARQLMQVRGVSGEKAAALVD 496
Query: 584 LYPTLLSLAHAYSILEGDVCA---QEEML 609
Y T SL AY D CA ++EML
Sbjct: 497 RYSTPASLLAAY-----DACATSKEQEML 520
Score = 82 (33.9 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A A+L+ LYR + ++ + L+ ++ + PR
Sbjct: 130 YWPARHSGARAVLLLLYR------------EHLNPSGHGFLTKEELLQGCAQKAPRVAPG 177
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
S + W +++L+ + LV ++ PA+Y LTP G E A+ G + S+ NV
Sbjct: 178 SAQPW----PALRSLLHRNLVFRTHRPARYSLTPEGLELAQRLAESEGLS-SL-NVGTAP 231
Query: 237 DSDKNELSEL 246
+ E E+
Sbjct: 232 EESPGEEPEV 241
>UNIPROTKB|F6Q077 [details] [associations]
symbol:MUS81 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR006166 InterPro:IPR010996
InterPro:IPR020819 Pfam:PF02732 SMART:SM00891 GO:GO:0003677
GO:GO:0006259 GO:GO:0090305 InterPro:IPR011335 SUPFAM:SSF52980
GO:GO:0004518 SUPFAM:SSF47802 Gene3D:3.40.50.10130
GeneTree:ENSGT00390000005498 EMBL:DAAA02063574 IPI:IPI00760437
Ensembl:ENSBTAT00000028603 Uniprot:F6Q077
Length = 436
Score = 192 (72.6 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 54/141 (38%), Positives = 76/141 (53%)
Query: 364 PLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIA 423
PL G Y V+L +D E +G+ R + + + VR+L VGD +W+A
Sbjct: 260 PLELGP---GEYRVLLCVDVGE---TKGAGHRPELLRELRRLHVAHTVRKLHVGDFVWVA 313
Query: 424 RHRQTQ-----SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE--G 476
+ + +E VLD IVERK++DDL SSI D R+R+QK RL RCGL + +YLVE G
Sbjct: 314 QETSPRDPARPAELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGRRVYLVEEHG 373
Query: 477 DPNSSEAAES-IKTACFTTEI 496
S ES + A T++
Sbjct: 374 SARSLSLPESTLLQAVTNTQV 394
Score = 101 (40.6 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A A+L+ LYR N + Q + E P +P G R
Sbjct: 130 YWPARHSGARAVLLQLYREHLNPSG----QGFLTKEELLQRC-APKVPRVAPGSAR---- 180
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
P W +++L+ + LV+++ PA+Y LTP G E A++ G + NV +G
Sbjct: 181 -P------WPALRSLLHRNLVLRTHQPARYSLTPQGLELAQKLADSEGLG--LLNVGSGP 231
Query: 237 DSDKNELSEL 246
+ + E E+
Sbjct: 232 EEPRGEEPEV 241
>DICTYBASE|DDB_G0276519 [details] [associations]
symbol:mus81 "crossover junction endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0090305 "nucleic acid
phosphodiester bond hydrolysis" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR006166 InterPro:IPR010996 InterPro:IPR020819
SMART:SM00891 dictyBase:DDB_G0276519 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GenomeReviews:CM000151_GR GO:GO:0006310
GO:GO:0090305 InterPro:IPR011335 SUPFAM:SSF52980 GO:GO:0004519
EMBL:AAFI02000015 SUPFAM:SSF47802 eggNOG:COG1948
Gene3D:3.40.50.10130 KO:K08991 RefSeq:XP_643164.1
ProteinModelPortal:Q551H0 EnsemblProtists:DDB0304698 GeneID:8620572
KEGG:ddi:DDB_G0276519 InParanoid:Q551H0 OMA:YPKGPPT
ProtClustDB:CLSZ2846730 Uniprot:Q551H0
Length = 920
Score = 193 (73.0 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 41/97 (42%), Positives = 64/97 (65%)
Query: 380 ILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVE 439
I+D+RE V+ R I N ++ I +V++L +GD +W+A +E++L++I+E
Sbjct: 637 IIDNRE---VKSVTERDYICNKLNERGINAQVKKLELGDFVWVAIDEH-DNEWLLNYIIE 692
Query: 440 RKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEG 476
RK+VDDL SSI D RY++QK RL + G +IYL+EG
Sbjct: 693 RKRVDDLSSSIIDGRYKEQKFRLSKSGCDNIIYLIEG 729
Score = 100 (40.3 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 36/130 (27%), Positives = 65/130 (50%)
Query: 476 GDPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQL 535
G N S + +++ TA TT I EG ++ T + +T+ YI ITEY+K +L ++
Sbjct: 747 GTVNFSLSPDALATALVTTSICEGIIIKETKTIDNTI---DYIVN-ITEYFKEKLLKNNN 802
Query: 536 KCAAVCPPFDEFL-----KRC--QDLDKMT-------VSDVFAVQLMQVPQVTEEIAITV 581
+FL +C ++ +++ + + FA QL+Q+P + E A ++
Sbjct: 803 SGGGGGDEIIKFLFANKNTQCTLENFNQLNSKSKGLKLIEFFATQLIQIPGCSAEKAHSI 862
Query: 582 LDLYPTLLSL 591
+YPT +SL
Sbjct: 863 TQVYPTPMSL 872
Score = 49 (22.3 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 315 AVLCRLQEDEVYALHSELHSVREDYDAASRTCISTNDD 352
A+L ++ E+E ++ E+ + YD S +C NDD
Sbjct: 194 AILEQIVEEE--DINFEIPTNENYYDYGSGSCFDNNDD 229
>CGD|CAL0000062 [details] [associations]
symbol:orf19.4206 species:5476 "Candida albicans" [GO:0008821
"crossover junction endodeoxyribonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0048476 "Holliday junction resolvase complex"
evidence=IEA] [GO:0000712 "resolution of meiotic recombination
intermediates" evidence=IEA] [GO:0033314 "mitotic DNA replication
checkpoint" evidence=IEA] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IEA] [GO:0000711 "meiotic DNA repair
synthesis" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA] InterPro:IPR006166 InterPro:IPR020819 Pfam:PF02732
SMART:SM00891 CGD:CAL0000062 GO:GO:0005634 GO:GO:0007126
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
GO:GO:0090305 InterPro:IPR011335 SUPFAM:SSF52980 GO:GO:0004519
eggNOG:COG1948 Gene3D:3.40.50.10130 KO:K08991 EMBL:AACQ01000206
EMBL:AACQ01000205 RefSeq:XP_711258.1 RefSeq:XP_711281.1
ProteinModelPortal:Q59NG5 STRING:Q59NG5 GeneID:3647121
GeneID:3647146 KEGG:cal:CaO19.11682 KEGG:cal:CaO19.4206
Uniprot:Q59NG5
Length = 614
Score = 190 (71.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 40/106 (37%), Positives = 66/106 (62%)
Query: 370 RFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQ 429
R ED YEV++ +D+RE ++ R + ++ EV+ L GD +W+ R+ T
Sbjct: 317 RKED-YEVIVYMDNRE---IRSRADRDHFQTRLQTLGVKCEVKPLSSGDVLWVGRNTSTG 372
Query: 430 SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE 475
+E VL+++ ERK++DDL SI+D R+++QK R+ + G+K YLVE
Sbjct: 373 TEAVLNYLCERKRLDDLCDSIKDGRFQEQKNRMKKTGIKHCYYLVE 418
Score = 100 (40.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 64/264 (24%), Positives = 108/264 (40%)
Query: 116 RYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFG 175
+Y+P+ S +A+LI LY + N M K+ +I A TP
Sbjct: 126 KYVPKHRSGGFAILIALYLYDKDRNG-MTKERIIAGA-------TPYCDRSFSNN----- 172
Query: 176 SSPRDWYSGWSCMKTLITKGLVVKSS-CPAKYMLTPGGREAARECLSRSGFADSIENVVN 234
++ +++YS WS KTL L+ + P Y LT G A++ + G + E
Sbjct: 173 AASKEFYSAWSSAKTLENHNLISTTGRSPKIYFLTDEGVSLAQQLKTAIGLSSPPEG--- 229
Query: 235 GKDSDKNELSELDLVLA-HPDSNGEVTECFVPLSRKEKSTDVPFESLER--FTRMGYSK- 290
K +D+N + E D++ E++ P R S+ P + + K
Sbjct: 230 SKKNDRNMIMEQSFDNGIRLDTSFELSS---PAGRAMLSSS-PIRRISNPVHSNRAIQKM 285
Query: 291 -EQVLRAFGEVSETSQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDAASRTCIST 349
E+ LR GE +SQH + ++ + + E Y E+ ++ + SR +
Sbjct: 286 LEKELRN-GETPPSSQHDAGNRIYDGIKYEVWRKEDY----EVIVYMDNREIRSR---AD 337
Query: 350 NDDPKTRVNLLSVP----PLSFGE 369
D +TR+ L V PLS G+
Sbjct: 338 RDHFQTRLQTLGVKCEVKPLSSGD 361
Score = 76 (31.8 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 35/165 (21%), Positives = 72/165 (43%)
Query: 433 VLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAESIKTACF 492
V D + + KV DL SI+ + Q + R L++ + E + + I+
Sbjct: 417 VEDMVSYQDKVYDLMDSIQSSL--TQTMTTARLYLRRFKDIDETTAFIASNTKVIENLKS 474
Query: 493 TTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQ--LKCAAVCPPFDEFLKR 550
+++ D++ + L K+ ++ K + +D +C + F + L +
Sbjct: 475 NLIVIKPQDIKNQQDYLNILLKFR------NKFEKTQPHQDNPDYECVQLFSRFQDMLGK 528
Query: 551 CQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAY 595
++MTV ++F + LM + V+ E A+ + + +PT SL Y
Sbjct: 529 T---NQMTVKEMFILMLMTIRGVSLEKAVVIQNRFPTPKSLLEYY 570
>GENEDB_PFALCIPARUM|PF14_0470 [details] [associations]
symbol:PF14_0470 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR006166 InterPro:IPR010996
InterPro:IPR020819 Pfam:PF02732 SMART:SM00891 GO:GO:0003677
GO:GO:0006259 EMBL:AE014187 GO:GO:0090305 InterPro:IPR011335
SUPFAM:SSF52980 GO:GO:0004518 SUPFAM:SSF47802 Gene3D:3.40.50.10130
RefSeq:XP_001348644.2 ProteinModelPortal:Q8IKY1 IntAct:Q8IKY1
MINT:MINT-1655910 EnsemblProtists:PF14_0470:mRNA GeneID:812052
KEGG:pfa:PF14_0470 EuPathDB:PlasmoDB:PF3D7_1449400
ProtClustDB:CLSZ2515278 Uniprot:Q8IKY1
Length = 1271
Score = 131 (51.2 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 36/107 (33%), Positives = 62/107 (57%)
Query: 431 EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRC-GLKKLIYLVEGDPN-------SSE 482
E+VL +I+ERK ++DL +SI D RY +QK R++R + +IYL+E N SS+
Sbjct: 1033 EFVLKWIIERKTLNDLSASIIDGRYDEQKYRMMRLRDIHHIIYLIENCNNTYRNYMNSSK 1092
Query: 483 AA-ESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKV 528
+ E++ A +T+++ GF + + + TL I Q I ++ K+
Sbjct: 1093 ISYETLNNAQHSTQLVSGFSILGSQHMNHTLFLLCEIHQEIIKHIKL 1139
Score = 87 (35.7 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 375 YEVVLILDDREQFAVQGS--RSRRIIENVCSQFKIQMEVRRLPVGDGIWIAR 424
YE+++I+D+RE V GS ++ V + I+ E R LP+GD IWI R
Sbjct: 846 YEIIMIIDNRE---VTGSSYEFNEKMKKVFNDKNIKYETRNLPLGDIIWICR 894
Score = 52 (23.4 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 1 MIELIEMENHSKRRVVCAENEELAMYMLQ-KRQEMAETPKGLSENIDMTLSKAYNNICDA 59
M ++I +N + + EN Y + K++ +A+ G + N+ ++ K ++I
Sbjct: 8 MNKIINSKNR-RHYSMHPENAIFFDYFINLKKKAIAQ---GYN-NLVISFKKIISSITKY 62
Query: 60 KNPIKTLKDLSQVKGVGK 77
PIK D ++KGVGK
Sbjct: 63 PLPIKNSLDAYKLKGVGK 80
Score = 41 (19.5 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 227 DSIENVVNGKDSDK-NELSELDLVLAHPDSNGEVTEC 262
D + N N +++ N + D VL + E +EC
Sbjct: 450 DEMNNKQNRQENISINNIQTSDAVLVQKEEKEEFSEC 486
Score = 40 (19.1 bits), Expect = 7.4e-08, Sum P(4) = 7.4e-08
Identities = 6/28 (21%), Positives = 17/28 (60%)
Query: 5 IEMENHSKRRVVCAENEELAMYMLQKRQ 32
I+ ++ K+ + C++ EE + +K++
Sbjct: 375 IDSPSYMKKNLRCSDTEEKCFELSEKKE 402
Score = 39 (18.8 bits), Expect = 7.7e-09, Sum P(4) = 7.7e-09
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 225 FADSIENVVNGKDSDKNELSE 245
F S N +N +D D NE++E
Sbjct: 814 FDTSNINNLNKEDKDLNEMNE 834
>UNIPROTKB|Q8IKY1 [details] [associations]
symbol:PF14_0470 "DNA replication related protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR006166 InterPro:IPR010996
InterPro:IPR020819 Pfam:PF02732 SMART:SM00891 GO:GO:0003677
GO:GO:0006259 EMBL:AE014187 GO:GO:0090305 InterPro:IPR011335
SUPFAM:SSF52980 GO:GO:0004518 SUPFAM:SSF47802 Gene3D:3.40.50.10130
RefSeq:XP_001348644.2 ProteinModelPortal:Q8IKY1 IntAct:Q8IKY1
MINT:MINT-1655910 EnsemblProtists:PF14_0470:mRNA GeneID:812052
KEGG:pfa:PF14_0470 EuPathDB:PlasmoDB:PF3D7_1449400
ProtClustDB:CLSZ2515278 Uniprot:Q8IKY1
Length = 1271
Score = 131 (51.2 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 36/107 (33%), Positives = 62/107 (57%)
Query: 431 EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRC-GLKKLIYLVEGDPN-------SSE 482
E+VL +I+ERK ++DL +SI D RY +QK R++R + +IYL+E N SS+
Sbjct: 1033 EFVLKWIIERKTLNDLSASIIDGRYDEQKYRMMRLRDIHHIIYLIENCNNTYRNYMNSSK 1092
Query: 483 AA-ESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKV 528
+ E++ A +T+++ GF + + + TL I Q I ++ K+
Sbjct: 1093 ISYETLNNAQHSTQLVSGFSILGSQHMNHTLFLLCEIHQEIIKHIKL 1139
Score = 87 (35.7 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 375 YEVVLILDDREQFAVQGS--RSRRIIENVCSQFKIQMEVRRLPVGDGIWIAR 424
YE+++I+D+RE V GS ++ V + I+ E R LP+GD IWI R
Sbjct: 846 YEIIMIIDNRE---VTGSSYEFNEKMKKVFNDKNIKYETRNLPLGDIIWICR 894
Score = 52 (23.4 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 1 MIELIEMENHSKRRVVCAENEELAMYMLQ-KRQEMAETPKGLSENIDMTLSKAYNNICDA 59
M ++I +N + + EN Y + K++ +A+ G + N+ ++ K ++I
Sbjct: 8 MNKIINSKNR-RHYSMHPENAIFFDYFINLKKKAIAQ---GYN-NLVISFKKIISSITKY 62
Query: 60 KNPIKTLKDLSQVKGVGK 77
PIK D ++KGVGK
Sbjct: 63 PLPIKNSLDAYKLKGVGK 80
Score = 41 (19.5 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 227 DSIENVVNGKDSDK-NELSELDLVLAHPDSNGEVTEC 262
D + N N +++ N + D VL + E +EC
Sbjct: 450 DEMNNKQNRQENISINNIQTSDAVLVQKEEKEEFSEC 486
Score = 40 (19.1 bits), Expect = 7.4e-08, Sum P(4) = 7.4e-08
Identities = 6/28 (21%), Positives = 17/28 (60%)
Query: 5 IEMENHSKRRVVCAENEELAMYMLQKRQ 32
I+ ++ K+ + C++ EE + +K++
Sbjct: 375 IDSPSYMKKNLRCSDTEEKCFELSEKKE 402
Score = 39 (18.8 bits), Expect = 7.7e-09, Sum P(4) = 7.7e-09
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 225 FADSIENVVNGKDSDKNELSE 245
F S N +N +D D NE++E
Sbjct: 814 FDTSNINNLNKEDKDLNEMNE 834
>UNIPROTKB|H0YDK3 [details] [associations]
symbol:MUS81 "Crossover junction endonuclease MUS81"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR020819 GO:GO:0003677
GO:GO:0006259 GO:GO:0090305 InterPro:IPR011335 SUPFAM:SSF52980
EMBL:AP001266 GO:GO:0004518 EMBL:AP001201 Gene3D:3.40.50.10130
HGNC:HGNC:29814 Ensembl:ENST00000530111 Uniprot:H0YDK3
Length = 231
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 35/126 (27%), Positives = 54/126 (42%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y P R+S A +L+ LYR N N L+ ++ + PR
Sbjct: 26 YWPARHSGARVILLVLYREHLNPNGH------------HFLTKEELLQRCAQKSPRVAPG 73
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGK 236
S R W +++L+ + LV+++ PA+Y LTP G E A++ G S+ NV G
Sbjct: 74 SARPW----PALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGL--SLLNVGIGP 127
Query: 237 DSDKNE 242
E
Sbjct: 128 KEPPGE 133
Score = 79 (32.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 431 EYVLDFIVERKKVDDLRSSIRDNRY 455
E VLD IVERK++DDL SSI D R+
Sbjct: 207 ELVLDHIVERKRLDDLCSSIIDGRF 231
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 632 604 0.00086 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 619 (66 KB)
Total size of DFA: 334 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.87u 0.18s 54.05t Elapsed: 00:00:03
Total cpu time: 53.88u 0.18s 54.06t Elapsed: 00:00:03
Start: Fri May 10 10:43:48 2013 End: Fri May 10 10:43:51 2013