BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006771
(632 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5W9E7|MUS81_ARATH Crossover junction endonuclease MUS81 OS=Arabidopsis thaliana
GN=MUS81 PE=1 SV=1
Length = 659
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/669 (57%), Positives = 469/669 (70%), Gaps = 61/669 (9%)
Query: 12 KRRVVCAENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQ 71
+RRV+C EN LA Y+LQK+QE AE PKGLSEN++ T K Y ++CDAK+PI TLKDLSQ
Sbjct: 4 ERRVLCPENRGLAAYVLQKKQEYAEKPKGLSENLERTFVKGYRSVCDAKDPINTLKDLSQ 63
Query: 72 VKGVGKWILKLMQEFFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLIT 131
+KG GKW++KLM+ +F+T SE EDL KA G KRY+PQRNSV YALLIT
Sbjct: 64 IKGFGKWMVKLMKGYFDTAVESSEQEDLPDNRAGKKA---NGKKRYIPQRNSVGYALLIT 120
Query: 132 LYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTL 191
L+R TTNG EFMRKQ+LIDAA+A+GLSH P+ PEKGKGK G S R+WYSGWSCM TL
Sbjct: 121 LHRRTTNGKEFMRKQELIDAADANGLSHAPVGPEKGKGKA-GLGHSKREWYSGWSCMTTL 179
Query: 192 ITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSDKNELSELDLVLA 251
I KGLVVKSS PAKYMLT GRE A EC+ RSG DS++ + + E+D
Sbjct: 180 IQKGLVVKSSNPAKYMLTVEGREVANECILRSGLPDSVDIL---------SVDEMDPTPQ 230
Query: 252 HPDSNGEVTECFVPL--------SRKEKSTDVPFESLERFTRMGYSKEQVLRAFGEVSET 303
+ + C + R + +P + LE+FT GYSKEQV+ AF EVS+
Sbjct: 231 AKKTPNQNPTCSFTMREELPYVDPRCRAQSAIPSDILEKFTPFGYSKEQVVAAFREVSDG 290
Query: 304 SQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDA---------------------- 341
S K+ S+LW +V+C L++ EVY + + ++D
Sbjct: 291 SGDKDPSTLWLSVMCHLRQAEVYNSCPDSRNSKKDSSGPFKSQIRQVDLEGSRAKKFRSC 350
Query: 342 ---------------ASRTCIST--NDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDR 384
A + C S+ +D K N+ +PPL FGE FE+AY+V+LILDDR
Sbjct: 351 NDGSTLNPCSSGSSHAVKACSSSLASDGTKGITNIPRLPPLQFGETFEEAYDVILILDDR 410
Query: 385 EQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKVD 444
E+FA +GSRSR I+EN+CS+F I++EVRRLPVGD IWIARH+ ++EYVLDFI ERK VD
Sbjct: 411 EKFATKGSRSRNIVENICSEFNIKIEVRRLPVGDCIWIARHKYLETEYVLDFIAERKNVD 470
Query: 445 DLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQR 504
D+RSSIRDNRYRDQKLRL R G KKLIY++EGDPN S+AAESIKTACFTTEILEGFDV R
Sbjct: 471 DMRSSIRDNRYRDQKLRLQRSGFKKLIYILEGDPNHSDAAESIKTACFTTEILEGFDVLR 530
Query: 505 TSGLADTLRKYGYITQAITEYYKVELPE-DQLKCAAVCPPFDEFLKRCQDLDKMTVSDVF 563
T GL +TLRKYGY+T++I +YYK+ + + DQ K AA CP FD F+KRCQDLDKMT+SDVF
Sbjct: 531 THGLGETLRKYGYLTKSIYQYYKLRVNDNDQSKGAASCPSFDSFVKRCQDLDKMTISDVF 590
Query: 564 AVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEEMLWKQSNNAVSASASR 623
A+QLMQVPQVTEEIAI VLD+YPTLLSLA AYS LE DV AQEEML +SNN + ASAS+
Sbjct: 591 AIQLMQVPQVTEEIAIAVLDMYPTLLSLASAYSHLEADVSAQEEMLRNRSNNVICASASK 650
Query: 624 NIFQLVWGK 632
NIF+LVWG+
Sbjct: 651 NIFKLVWGE 659
>sp|Q8GT06|MUS81_ORYSJ Crossover junction endonuclease MUS81 OS=Oryza sativa subsp.
japonica GN=MUS81 PE=1 SV=1
Length = 660
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/275 (61%), Positives = 211/275 (76%), Gaps = 5/275 (1%)
Query: 358 NLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVG 417
++L++PP + F + YEVVLILDDRE F G RSR+ ++N+ SQF++ +E++ LPVG
Sbjct: 390 SILAMPPRRSSKNFLEDYEVVLILDDRENF---GGRSRKTVDNIHSQFRVPVEIKHLPVG 446
Query: 418 DGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGD 477
DGIWIAR R+ +EYVLDFIVERK V DL SSI DNRY+DQKLRL +CGL+KLIYLVEGD
Sbjct: 447 DGIWIARDRKLHTEYVLDFIVERKNVADLCSSITDNRYKDQKLRLKKCGLRKLIYLVEGD 506
Query: 478 PNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKC 537
PN + +E IKTACFTTEILEGFDVQRT G A+T+R YG +T +ITEYY
Sbjct: 507 PNPLDTSERIKTACFTTEILEGFDVQRTPGYAETVRTYGNLTHSITEYYSTHF-STGANT 565
Query: 538 AAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSI 597
+ VC +DEF K+C DL K+TVSDVFA+QLMQVPQVTEE A+ V+ LYPTL SLA AYS+
Sbjct: 566 SQVCLTYDEFTKKCDDLKKITVSDVFALQLMQVPQVTEEAALAVIGLYPTLFSLAKAYSM 625
Query: 598 LEGDVCAQEEMLWKQSNNAVSASASRNIFQLVWGK 632
L+GD AQE+ML K + ++A ASRNIF+LVW +
Sbjct: 626 LDGDTHAQEKML-KNKSTLINAGASRNIFKLVWAE 659
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 153/232 (65%), Gaps = 2/232 (0%)
Query: 14 RVVCAENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQVK 73
+V ENE +A +L+K + M E P GL EN+ TL K+Y N+C AK PI++LKDL Q+K
Sbjct: 9 KVHLRENEAVAQCVLEKWRSMEEKPGGLKENLAHTLYKSYRNVCAAKEPIRSLKDLYQIK 68
Query: 74 GVGKWILKLMQEFFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLITLY 133
GVGKW+++ ++ F S P + A +K K K G+KRY+PQ+NS AYA+LITL+
Sbjct: 69 GVGKWVIRQLKGSFPESSPDLSPPESNAAGEKGK--KAGGSKRYVPQKNSAAYAILITLH 126
Query: 134 RGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLIT 193
R T NG M+KQ+LIDA EASGLS + I P+K K KP F SS +DWY+GWSCMKTL +
Sbjct: 127 RETINGKSHMKKQELIDATEASGLSRSAIGPDKSKAKPGAFASSQKDWYTGWSCMKTLTS 186
Query: 194 KGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSDKNELSE 245
KGLV KS PAKYM+T G+ A ECLSRSG D +V D + S
Sbjct: 187 KGLVAKSGNPAKYMITEEGKSTALECLSRSGLDDHAAPLVINSAPDTSNASH 238
>sp|P87231|MUS81_SCHPO Crossover junction endonuclease mus81 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mus81 PE=1 SV=2
Length = 608
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 242/593 (40%), Gaps = 99/593 (16%)
Query: 31 RQEMAETPKGLSENIDMTLSKAYNNICDAKN-PIKTLKDLSQVKGVGKWILKLMQEFFET 89
R A KG+ I L K +N C N PI T + Q
Sbjct: 46 RPSQALALKGIGPTICAKLEKKWNAYCLENNIPISTHNE---------------QNDSHV 90
Query: 90 DSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLI 149
++ S E + K + K T+ K Y+P S AY++L LY N +EF K ++
Sbjct: 91 NANKSSSETSSEKPRSVKKPTTRKRKVYVPSYRSGAYSILCALY--MLNKHEFATKPQIV 148
Query: 150 DAAEASGLSHTPIMPEKGKGKPRQFGSSP-RDW-YSGWSCMKTLITKGLVVKSSCPAKYM 207
A+ S FGS+ R+ Y+ WS MKTLITK LV ++ P+KY
Sbjct: 149 TMAQPYCDS--------------SFGSATDRNMRYTAWSAMKTLITKNLVYQTGHPSKYC 194
Query: 208 LTPGGREAARECLSRSGFADSIENVVNGKDSDKNELSELDLVLAHPDSNGEVTECFVPLS 267
LT G E C+ + DS + H SN V++
Sbjct: 195 LTDDGEEV---CIRLAKVDDSFQR-------------------KHTVSNFSVSKS----D 228
Query: 268 RKEKSTDVPFESLERFTRMGYSKEQVLRAFGEVSETS---QHKEISSLWPAVLCRLQEDE 324
+ S P + + G S + GE+ T H E+S V + D+
Sbjct: 229 DHDSSLCQPPNFVTSINKAGSSSDHG----GELHVTYCPVDHNEVSD---GVETDIDVDQ 281
Query: 325 VYALHSELHSVREDYDAASRTCISTNDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDR 384
V L + + + + I + K + N ++ L V L++D R
Sbjct: 282 V----DSLTGIHDHHIINNEQLIDLTEQEKKQPNESNLSNLKIETVLFSNCTVFLLIDTR 337
Query: 385 EQFAVQGSRSRR-IIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKV 443
E ++ R II+ + + F + +VR L +GD +W+AR ++ E VLDF+VERK+
Sbjct: 338 E---IRSPLDRNLIIDKLTNDFGVNCQVRSLELGDALWVARDMESGQEVVLDFVVERKRY 394
Query: 444 DDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQ 503
DDL +SI+D R+ +QK RL + G++ + Y++E ESI+TA T++ + F V+
Sbjct: 395 DDLVASIKDGRFHEQKARLKKSGIRSVTYILEESSYDESFTESIRTAVSNTQVDQLFHVR 454
Query: 504 RTSGLADTLRKYGYITQAITEYYKV------------------ELPEDQLKCAAVCP--- 542
T L ++ +T+ I +Y+ L E LK P
Sbjct: 455 HTRSLEHSVSLLAEMTKQINLFYEKRKTLAVIPDLSIEAKTYESLREQLLKIDPSTPYHI 514
Query: 543 PFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAY 595
+ F +TV D+F LM + ++ AI + YPT + L AY
Sbjct: 515 SYHAFSSVLSKSSTLTVGDIFIRMLMTIKGISASKAIEIQKKYPTFMHLFEAY 567
>sp|Q6BJ48|MUS81_DEBHA Crossover junction endonuclease MUS81 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=MUS81 PE=3 SV=2
Length = 651
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 244/521 (46%), Gaps = 94/521 (18%)
Query: 117 YMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGS 176
Y+P++ S YA+L+ LY G + K+++I A TP + K P
Sbjct: 123 YIPRKRSGGYAILLALYFGDKKKTG-LTKEEIIQRA-------TPYSDKSFKSNP----- 169
Query: 177 SPRDWYSGWSCMKTLITKGLVVKSSCPAK-YMLTPGGREAARECLSRSGFADS-IENVVN 234
S ++YS WS +K+L T LV S +K Y LT G E A++ GF S I N +
Sbjct: 170 SANEFYSAWSSIKSLQTHDLVDSSGRSSKSYFLTEEGYELAKQLKDAEGFESSPITNHIA 229
Query: 235 GKDSDKNELSELDLVLAHPDSN-GEVTECF--VPLSRKEKSTDVPFESLERF----TRMG 287
+LS + V PDS+ ++++ PL + + + D R+ +R+
Sbjct: 230 -------DLSFDNQVRVTPDSSYSKISQQLDSSPLMKTKNNKD-------RYGLGPSRLS 275
Query: 288 YSKEQVLRAFGEVSETSQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDAASRTCI 347
++E++L ++SS P ++ + + + L L S R I
Sbjct: 276 STRERIL-------------DLSS-SPRLISSPLKPKDFVLRESLSSHNSTRPLQDRESI 321
Query: 348 STNDD---PKTRVNLL--SVPPLSFGERFE----DAYEVVLILDDREQFAVQGSRSRRII 398
S +D KT+ L+ + + G ++ +E++LI+D+RE ++ R R
Sbjct: 322 SKAEDGINTKTKARLVHDASKRIYDGTNYDIWVPGEFEIILIIDNRE---IRSQRDRDFF 378
Query: 399 ENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQ 458
+ + K++ +VR L VGD +W A+H++T E +L++I ERK++DDL SSI+D R+++Q
Sbjct: 379 QTRLTSLKVECDVRPLSVGDVVWTAKHKKTGREVILNYICERKRLDDLVSSIKDGRFQEQ 438
Query: 459 KLRLVRCGLKKLIYLVE----GDPNS-SEAAESIKTACFTTEILEGFDVQRTSGLADTLR 513
K RL + G+K+ YLVE D N + +++I+TA T + F ++R + DT+
Sbjct: 439 KNRLKKSGMKQFYYLVEDVVTSDMNKFGDMSDAIQTAMSMTMTISNFYLKRFKSIEDTIA 498
Query: 514 KYGYITQAITEYY----------KVELPEDQLKCAAVCPPFDE-FLKR-----CQDL--- 554
+TQ I + + K ++Q + +++ F E F R C L
Sbjct: 499 FLASLTQVIKDQFAKNKTNLLVLKARSIKNQAEYSSLIAKFKEKFENRSTSYECAHLFST 558
Query: 555 --------DKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPT 587
MTV + F + LM + V+ E A+ + + + T
Sbjct: 559 FQDSMGKTGMMTVKETFILMLMGIRGVSLERAVAIQNRFKT 599
>sp|Q6CPQ8|MUS81_KLULA Crossover junction endonuclease MUS81 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=MUS81 PE=3 SV=1
Length = 614
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 149/622 (23%), Positives = 266/622 (42%), Gaps = 121/622 (19%)
Query: 31 RQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQVKGVGKWILKLMQEFFET- 89
+QE+ ++ E + M L++A + + +PI KDL +VKG+G+ + + + +T
Sbjct: 16 QQEVNQSTSAHQEKLVMVLNRALFALKNYPDPIYHPKDLLKVKGIGQTTMNKLSKRLKTY 75
Query: 90 --DSGGSEPED--------------------------LTAKSKKSKAVKTKGTKRYMPQR 121
++G S PE+ L + +S+ + + K+Y+P+
Sbjct: 76 CEENGYSFPEESSSTDNTQSTQNDSNPSNTQKTRVRTLEPEENESQGTRKRRKKKYIPRN 135
Query: 122 NSVAYALLITLYRGT--TNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPR 179
S Y +L+ L +G R+Q + A++ S+ + S +
Sbjct: 136 RSGGYGILLGLLELGCDKDGTACTRRQLIAVASKYCDQSY-------------EKNPSTK 182
Query: 180 DWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSD 239
++YS WS +K+L T LV++ P+++ LT G + ADS++ N + D
Sbjct: 183 EFYSAWSAIKSLKTNDLVIEQGRPSQFSLTEAG----------TILADSLK-TANNIEFD 231
Query: 240 KNELSELDLVLAHPDSNGEVTECFVPLSRKEKSTDVPFESLERFTRMGYSKEQVLRAFGE 299
+ + E L + G F + E V F L M
Sbjct: 232 VSSVYERRL------NRGNTQNSF---TNDEHDHTVNFSGLMNHANMS------------ 270
Query: 300 VSETSQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDAASRTCISTNDDPKTRVNL 359
++E++ + A R++++E + +E+ + PK +V+
Sbjct: 271 INESANSSRLFLDATANSSRIEQNEEPEVSAEI----------------STPIPKQKVSK 314
Query: 360 LSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDG 419
+ + D+Y+++L +D RE V+ R Q I+ E L VGD
Sbjct: 315 GRWKGVKYELWKPDSYDIILHIDHRE---VRSKEDRGFFARKLLQRGIETESSSLTVGDM 371
Query: 420 IWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDP- 478
IW+A+H+Q+ + LDFIVERK++DDL SIRDNR+ +QK RL + G K + YLVE
Sbjct: 372 IWLAKHKQSGQQCALDFIVERKRLDDLVISIRDNRFSEQKNRLQKTGCKHIFYLVEETTG 431
Query: 479 -NSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK----VELPED 533
N S++A+ +KT+ +TT I F ++RT T++ ++ I E Y V + D
Sbjct: 432 YNVSDSADMMKTSIWTTVIYNDFHIKRTRNADTTVQWLTDMSLIIKELYSRKSLVVINHD 491
Query: 534 QLKCAAV--------------------CPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQV 573
+ ++ C ++ + MTV +++ LM V +
Sbjct: 492 HITNQSIYLTSLKMFRTEFERNKEIECCHNYESMQSAMVKTNLMTVKELYLRALMSVKGI 551
Query: 574 TEEIAITVLDLYPTLLSLAHAY 595
+ E A+ + YPT +L AY
Sbjct: 552 SLEKALMIQSRYPTFKTLLKAY 573
>sp|Q7SD49|MUS81_NEUCR Crossover junction endonuclease mus-81 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=mus-81 PE=3 SV=1
Length = 645
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 226/534 (42%), Gaps = 76/534 (14%)
Query: 110 KTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEA-SGLSHT-PIMPEKG 167
+ + + Y+P+ NS AYALL+ L EFM K LI A+ S S T P M K
Sbjct: 114 RARTARPYVPKLNSGAYALLMAL--SELGPKEFMDKTTLIAKAQPYSEHSFTVPTMANKS 171
Query: 168 KGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAK-YMLTPGGREAARECLSRSGFA 226
Y+ W MKTL K LV P+K Y LT G E +
Sbjct: 172 --------------YTAWDSMKTLEQKELVWLRGLPSKRYSLTDEGWEVVKRMKEAQNLV 217
Query: 227 DSIENVVNGKDSDKNELSELDLVLAHPDSNGEVTECFVPLSRKEKSTDVPFESLERFTRM 286
D + N + +N ++ SN +E P + + V ES R+T +
Sbjct: 218 DGVAGSAN---TSRNAIAS-----GSGTSNPNRSENVNP---NRQDSGVKRES--RYTPL 264
Query: 287 GYSKEQVLRAFGEVSETSQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDAASRTC 346
A E + +S + ++ ED Y +R+ +
Sbjct: 265 DLKPFVTTTATPERPLQPKPHTANSEYSIIIDSDDEDPKYDEEDRKPIIRDTTNRDYIDL 324
Query: 347 ISTNDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFK 406
++ D NL P+ ++ V L+LD RE VQ +R I+ S+
Sbjct: 325 VADGDSVPDESNLPHFTPIRLAP---GSFTVELVLDTRE---VQAKNNRDHIQEELSKLG 378
Query: 407 IQMEVRRLPVGDGIWIARHRQTQ---------SEYVLDFIVERKKVDDLRSSIRDNRYRD 457
++ +R L +GD +WIA+ +Q E VLD+IVERK++DDL SI+D R+R+
Sbjct: 379 VRPVMRSLELGDVLWIAKCKQPGWLNRLGAEGDEVVLDYIVERKRLDDLIGSIKDGRFRE 438
Query: 458 QKLRLVRCGLKKLIYLVEG---DPN-SSEAAESIKTACFTTEILEGFDVQRTSGLADTLR 513
QK RL R G+K ++Y++E D + + +++ TA + +++ G+ +++T +A+++R
Sbjct: 439 QKYRLKRSGMKNVVYIIENYNIDMDIRRQYQDAMDTAMASIQVVNGYFLKKTDTIAESIR 498
Query: 514 KYGYITQAITEYYKVE----LPEDQLKCAAVCP----------------PFDEFLKRCQD 553
+T + E Y+ + +P L P + F
Sbjct: 499 YLAAVTYMLKEIYESKPLFVIPTQVLTAKNYLPLVKHLREKEPSRGYYISYPAFASLVSK 558
Query: 554 LDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEE 607
+ MT+ DVF LM + +++ E AI + ++ T L A+ + C +E
Sbjct: 559 SEMMTLKDVFIKMLMCIRRLSGEKAIEIQKVWKTPYQLVKAF-----EACGSDE 607
>sp|Q6FYA6|MUS81_CANGA Crossover junction endonuclease MUS81 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=MUS81 PE=3 SV=1
Length = 628
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 165/654 (25%), Positives = 266/654 (40%), Gaps = 124/654 (18%)
Query: 28 LQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQVKGVGKWILKLMQEFF 87
+Q QE+ ++ E + T SKA N+ D KDL +VKG+G I K ++
Sbjct: 11 VQWLQELIDSLSEKQEQLINTYSKAKKNLIDHDGVFYYPKDLLKVKGIGATIAKRLEARL 70
Query: 88 ET---DSGGSEP------EDLTAKSKKSKAVKT------------------KGTKRYMPQ 120
+ G P ++ T SK K V+T + ++Y+P+
Sbjct: 71 VKHCEEIGVDVPRKQLPIDNGTQGSKSLKRVRTQLRIDGINTNDTDINKPVRKKRKYIPK 130
Query: 121 RNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEA-SGLSHTPIMPEKGKGKPRQFGSSPR 179
+ S AYA+L+ L N+ + K D+I+AA+ + S TP + +
Sbjct: 131 KRSGAYAILLALLELGAQ-NKGVIKPDIIEAAQKYTDHSMTP-------------NYTTK 176
Query: 180 DWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSD 239
++YS WS + L LV+ P +Y LT G + AD++ + +G D D
Sbjct: 177 EFYSAWSSIAQLKKHELVLIEGRPQQYTLTEEGLQ----------LADTLR-LADGIDID 225
Query: 240 -KNELSELDLVLAHPDSNGEVTECFVPLSRKEKSTDVPFESLERFTRMGYSKEQVLRAFG 298
K+ S +D A+ + E T F L K + + ++ T + + + FG
Sbjct: 226 GKSIASSMDTNNAY--YSDEHTADFSAL--KHDLSGLTCAPIKDGTNSSGNYSILEKTFG 281
Query: 299 EVSETSQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDAASRTCISTNDDPKTRVN 358
+H EI +Q + + S I P+
Sbjct: 282 SQDFNVRHHEIG--------MVQRSHTFG------------NGDSNNSIEPL--PRDTSE 319
Query: 359 LLSVPPLSFGERFEDA---------YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQM 409
+ P L RFE YE+ ++D RE V+ R N ++
Sbjct: 320 FTTQPSLIQRRRFESVSYELWQPGTYEIYPVIDHRE---VRSHSDREFFFNAFKARDMKS 376
Query: 410 EVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKK 469
E+R+L +GD IW+A+++ T + +L+ I+ERK++DDL SIRDNR+ +QK RL + G K
Sbjct: 377 EIRQLSLGDIIWVAKNKTTGQQCILNTIIERKRLDDLAMSIRDNRFMEQKNRLEKSGCKH 436
Query: 470 LIYLVEGDPNSS--EAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK 527
YL+E SS A+++KT + + F + RT D++ K + I E YK
Sbjct: 437 KYYLIEETIGSSIGNMADALKTTLWIILVYYRFSMIRTVNAEDSVDKLHALHTVICESYK 496
Query: 528 -----VELPED----------------------QLKCAAVCPPFDEFLKRCQDLDKMTVS 560
V P D L+C C FD F + T+
Sbjct: 497 HKALVVLYPTDLKSQDHYRGILSIFQNEFERSGNLEC---CHTFDTFQDIMGKRELKTIK 553
Query: 561 DVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEEMLWKQSN 614
++ LM V V+ E A+ + +PTL L +AY + A+ M K N
Sbjct: 554 EITIHILMLVRGVSLEKAVFIQRHFPTLNHLLNAYRKCNSQMEAKLMMFQKFGN 607
>sp|Q7SXA9|MUS81_DANRE Crossover junction endonuclease MUS81 OS=Danio rerio GN=mus81 PE=1
SV=1
Length = 604
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 151/301 (50%), Gaps = 60/301 (19%)
Query: 374 AYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQ---- 429
+Y++VL +D E R + +++ + + + +VR+L VGD +W+AR R T
Sbjct: 310 SYDIVLCVDLCETTGGSSVRKQELVKEL-QRNSVTFDVRKLNVGDFLWVARERVTPVPGQ 368
Query: 430 ------SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEA 483
E VLD+I+ERK++DDL SI D R+R+QK RL RCGL+K IYLVE + S+ A
Sbjct: 369 LRPPVGKELVLDYIIERKRMDDLCGSIIDGRFREQKFRLKRCGLRKPIYLVE-ECGSAAA 427
Query: 484 AESI-----KTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK--------VEL 530
SI + A T++++GF V+R ++ +T+ + + Y+ EL
Sbjct: 428 HLSIPESTLQQAIVNTQVVDGFFVKRVQDAKESAAYLTIMTRYLQKLYQNCTLLCRSREL 487
Query: 531 PED----------QLKCAAVCPPFDEF-----LKRCQDLDKMTVSDVFAVQLMQVPQVTE 575
D L C+ + F EF +CQ TV +VFA QLMQ+ V+
Sbjct: 488 EGDGEAESEKMVANLSCSLMA--FTEFNYGAIKNKCQ-----TVREVFARQLMQISGVSG 540
Query: 576 EIAITVLDLYPTLLSLAHAYSILEGDVCA----QEEML----WKQSNNAVSASASRNIFQ 627
+ A VL Y T+ SL AY D C+ +E++L + + + + SR I+Q
Sbjct: 541 DKAAAVLKHYSTVSSLLQAY-----DKCSSETEKEKLLSSVKYGKLKRNLGPALSRTIYQ 595
Query: 628 L 628
L
Sbjct: 596 L 596
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 81 KLMQEFFETDSGG-SEPEDLTAKS-KKSKAVKTKGTKRYMPQRNSVAYALLITLYRGTT- 137
K M+E + SG SE LT K +K K K K + Y+PQ+ S YA+L+TLYR
Sbjct: 101 KQMEESQKEPSGNFSEHTKLTQKEVRKEKGAKKK--REYVPQKRSGGYAVLLTLYRHMQM 158
Query: 138 -NGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGL 196
FM + +L A+ + EK P GS Y+ WS + TLI K L
Sbjct: 159 PGSKGFMFRNELQTEAQP--------LCEKSFTVP-DLGSK----YTAWSSVSTLIQKEL 205
Query: 197 VVKSSCPAKYMLTPGG 212
VVK+ PA+Y LT G
Sbjct: 206 VVKTHNPARYSLTDQG 221
>sp|Q04149|MUS81_YEAST Crossover junction endonuclease MUS81 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MUS81 PE=1 SV=1
Length = 632
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 153/641 (23%), Positives = 253/641 (39%), Gaps = 123/641 (19%)
Query: 32 QEMAE--TPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQVKGVGKWILKLMQEFFE- 88
QE+ + TPK E + + KA N+ +A+ DL +VKG+G I+K +
Sbjct: 16 QELVDGLTPK--QEQLKIAYEKAKRNLQNAEGSFYYPTDLKKVKGIGNTIIKRLDTKLRN 73
Query: 89 ---------------TDSGGSEPEDLTAKSKKSKAVKTKGTKR---------------YM 118
T + + P T + +S + K Y+
Sbjct: 74 YCKIHHISPVEAPSLTQTSSTRPPKRTTTALRSIVNSCENDKNEAPEEKGTKKRKTRKYI 133
Query: 119 PQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSP 178
P++ S YA+L++L ++Q + A + S TP S
Sbjct: 134 PKKRSGGYAILLSLLELNAIPRGVSKEQIIEVAGKYSDHCMTP-------------NFST 180
Query: 179 RDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENV-VNGKD 237
+++Y WS + L LV++ P +Y LT G E + + G + EN N
Sbjct: 181 KEFYGAWSSIAALKKHSLVLEEGRPKRYSLTEEGVELTKSLKTADGISFPKENEEPNEYS 240
Query: 238 SDKNELSELDLVLAHPDSNGEVTECFVPLSRKEKS--TDVPFESLERFTRMGYSKEQVLR 295
+NE SE L D GE + P S D+ F+ L R+ + V +
Sbjct: 241 VTRNESSEFTANLT--DLRGEYGKEEEPCDINNTSFMLDITFQDLSTPQRL---QNNVFK 295
Query: 296 AFGEVSETSQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDAASRTCISTNDDPKT 355
S+T+ ISS +L V +D + + +
Sbjct: 296 NDRLNSQTN----ISS------------------HKLEEVSDDQTVPDSALKAKSTIKRR 333
Query: 356 RVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLP 415
R N +S G+ +EV I+D RE ++ R + ++ E+R+L
Sbjct: 334 RYNGVSYELWCSGD-----FEVFPIIDHRE---IKSQSDREFFSRAFERKGMKSEIRQLA 385
Query: 416 VGDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE 475
+GD IW+A+++ T + VL+ IVERK++DDL SIRDNR+ +QK RL + G + YL+E
Sbjct: 386 LGDIIWVAKNKNTGLQCVLNTIVERKRLDDLALSIRDNRFMEQKNRLEKSGCEHKYYLIE 445
Query: 476 G--DPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYK-----V 528
N E++KTA + + F + RT +T+ K + I+ +Y V
Sbjct: 446 ETMSGNIGNMNEALKTALWVILVYYKFSMIRTCNSDETVEKIHALHTVISHHYSQKDLIV 505
Query: 529 ELPED----------------------QLKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQ 566
P D ++C F E + + D TV ++
Sbjct: 506 IFPSDLKSKDDYKKVLLQFRREFERKGGIECCHNLECFQELMGKG---DLKTVGELTIHV 562
Query: 567 LMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEE 607
LM V ++ E A+ + +++PTL + AY C+ EE
Sbjct: 563 LMLVKGISLEKAVAIQEIFPTLNKILMAYK-----TCSSEE 598
>sp|Q91ZJ0|MUS81_MOUSE Crossover junction endonuclease MUS81 OS=Mus musculus GN=Mus81 PE=1
SV=2
Length = 551
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 136/287 (47%), Gaps = 43/287 (14%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIA-----RHRQTQ 429
Y V+L +D E +G+ R + + ++ VR+L VGD +W+A R +
Sbjct: 267 YRVLLCVDIGE---TRGAGHRPEMLRELQRLRVPHTVRKLHVGDFVWVAQETRPRDPERP 323
Query: 430 SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGD---PNSSEAAES 486
E VLD IVERK++DDL SSI D R+R+QK RL RCGL +YLVE N S +
Sbjct: 324 GELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGHRVYLVEEHGSVHNLSLPEST 383
Query: 487 IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVEL---------------- 530
+ A T++++GF V+RT + ++ +T+ + Y+
Sbjct: 384 LLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLERLYQGHTLRSRPWGAPGAAESEA 443
Query: 531 -PEDQLKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLL 589
P C+ + F +F +V +VFA QLMQV ++ E A V+D Y T
Sbjct: 444 KPSTNPLCSLLT--FSDFNAEAVKNKAQSVREVFARQLMQVRGLSGEKAAAVVDRYSTPA 501
Query: 590 SLAHAYSILEGDVCA---QEEMLWK-----QSNNAVSASASRNIFQL 628
SL AY D CA ++EML + + + SR ++QL
Sbjct: 502 SLLAAY-----DACATAKEQEMLLSTIKCGRLQRNLGPALSRTLYQL 543
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Query: 117 YMPQRNSVAYALLITLYRGTTN--GNEFMRKQDLIDAAEASGLSHTP-IMPEKGKGKPRQ 173
Y P +NS A +L+ LYR N G+ F+ K++L+ TP ++P G KP
Sbjct: 130 YWPAQNSGAREILLQLYREHLNSDGHSFLTKEELLQKCAQK----TPRVVP--GSSKP-- 181
Query: 174 FGSSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFA 226
W +++L+ + L++ + PA+Y LTP G E A++ G +
Sbjct: 182 -----------WPALRSLLHRNLILGTHRPARYALTPEGLELAQKLAEAEGLS 223
>sp|Q4KM32|MUS81_RAT Crossover junction endonuclease MUS81 OS=Rattus norvegicus GN=Mus81
PE=2 SV=1
Length = 551
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 136/287 (47%), Gaps = 43/287 (14%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIA-----RHRQTQ 429
Y V+L +D E +G+ R + + ++ VR+L VGD +W+A R +
Sbjct: 267 YRVLLCVDIGE---TRGAGHRPEMLRELQRLRVPHTVRKLHVGDFVWVAQETRPRDPERP 323
Query: 430 SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGD---PNSSEAAES 486
E VLD IVERK++DDL SSI D R+R+QK RL RCGL IYLVE N S +
Sbjct: 324 GELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGHRIYLVEEHGSVQNLSLPEST 383
Query: 487 IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVEL---------------- 530
+ A T++++GF V+RT + ++ +T+ + Y+
Sbjct: 384 LLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLERLYQGHTLHSRPWGTPGDAESEA 443
Query: 531 -PEDQLKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLL 589
P C+ + F +F +V +VFA QLMQV ++ E A ++D Y T
Sbjct: 444 KPSTNPLCSLLT--FSDFNAEAVKNKAQSVREVFARQLMQVRGLSGEKAAALVDRYSTPA 501
Query: 590 SLAHAYSILEGDVCA---QEEMLWK-----QSNNAVSASASRNIFQL 628
SL AY D CA ++EML + + + SR ++QL
Sbjct: 502 SLLAAY-----DACATTKEQEMLLSTVKCGRLQRNLGPALSRTLYQL 543
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 45/237 (18%)
Query: 12 KRRVVCAENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQ 71
KR + N ++ + R E A + KA ++ P++ K+
Sbjct: 10 KRPLPVCPNPLFVRWLTEWRDEAASR----GRHTRFVFQKALRSLQRYPLPLRNGKEAKI 65
Query: 72 VKGVGKWILKLMQEFFETD--SGGSE-PEDLTAKSKKSKA--VKTKGTKR---------- 116
++ G + +++ E + SGG P + K + SK + +G+
Sbjct: 66 LQHFGDRLCRMLDERLKEHLASGGDHAPSSPSGKKRASKGPPAQVQGSSMPVPTQPQAGS 125
Query: 117 ----YMPQRNSVAYALLITLYRGTTN--GNEFMRKQDLIDAAEASGLSHTP-IMPEKGKG 169
Y P +NS A +L+ LYR N G+ F+ K++L+ TP ++PE +
Sbjct: 126 TNAGYWPAQNSGAREILLQLYREHLNSDGHSFLTKEELLQKCAQK----TPRVVPESSRP 181
Query: 170 KPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFA 226
W ++ L+ + LV+++ PA+Y LTP G E A++ G +
Sbjct: 182 ---------------WPALRGLLHRNLVLRTHRPARYALTPEGLELAQKLAEAEGLS 223
>sp|Q754C9|MUS81_ASHGO Crossover junction endonuclease MUS81 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=MUS81 PE=3 SV=1
Length = 604
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 122/252 (48%), Gaps = 36/252 (14%)
Query: 374 AYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYV 433
+Y++ L +D RE V+ R N + +E + L +GD +W+ARHR ++S V
Sbjct: 318 SYDIELYIDHRE---VRAKSERDFFVNALLTRGVTVEGKALALGDMVWVARHRDSRSTCV 374
Query: 434 LDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAA--ESIKTAC 491
L+F++ERK++DDL SIRDNR+ +QK RL + G K + YLVE ++ A +IKT+
Sbjct: 375 LNFMLERKRLDDLAMSIRDNRFMEQKNRLKKTGCKHIFYLVEETSGTNVAGMEGAIKTSI 434
Query: 492 FTTEILEGFDVQRTSGLADTLRKYGYITQAITEYY------------------------- 526
+ T + GF V+RT DT+ +T + YY
Sbjct: 435 WMTYVYSGFHVKRTRNADDTVEWLHDMTCTVQRYYCSKSLLVLRPREIANQEDYGSLLSA 494
Query: 527 ---KVELPEDQLKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLD 583
+ E L+C C FD + + MTV +++ LM V+ E A+ +
Sbjct: 495 FRLQFERNNTSLEC---CHAFDCYQEVLGKTGLMTVKELYIRTLMLNRGVSLEKALAIQS 551
Query: 584 LYPTLLSLAHAY 595
+PTL SL A+
Sbjct: 552 KFPTLRSLMTAF 563
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 50/212 (23%)
Query: 21 EELAMYMLQKR-------QEMAETPK-----GLSENIDMTLSKAYNNICDAKN-PIKTLK 67
E++AM + R Q + ET K G+ +I L+ C N P++
Sbjct: 29 EKMAMVYFRARESLKRFDQPITETAKVLKVKGIGNSIKNKLASKLAQYCQDNNIPLEDAA 88
Query: 68 DLSQVKGVGKWILKLMQEFFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYA 127
S V G+ + E +D + K KK ++Y+P++ S AYA
Sbjct: 89 APSHVVGIS---------VTRVRTATQEKDDQSPKRKK---------RKYVPRKRSGAYA 130
Query: 128 LLI-TLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSP--RDWYSG 184
+L+ L G + + K+++IDAA K F S+P R++YS
Sbjct: 131 ILLGALELGCPSRG--LTKEEIIDAA--------------AKYCDVSFVSNPLTREFYSA 174
Query: 185 WSCMKTLITKGLVVKSSCPAKYMLTPGGREAA 216
W+ +K LI L+++ P +Y++T G + A
Sbjct: 175 WTAIKVLIDHDLMLEQGRPRRYIVTEAGEQMA 206
>sp|Q96NY9|MUS81_HUMAN Crossover junction endonuclease MUS81 OS=Homo sapiens GN=MUS81 PE=1
SV=3
Length = 551
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 126/262 (48%), Gaps = 35/262 (13%)
Query: 375 YEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIA-----RHRQTQ 429
Y V+L +D E +G R + + + VR+L VGD +W+A R
Sbjct: 267 YRVLLCVDIGE---TRGGGHRPELLRELQRLHVTHTVRKLHVGDFVWVAQETNPRDPANP 323
Query: 430 SEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDP---NSSEAAES 486
E VLD IVERK++DDL SSI D R+R+QK RL RCGL++ +YLVE N S +
Sbjct: 324 GELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLERRVYLVEEHGSVHNLSLPEST 383
Query: 487 IKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVE--------LPEDQLKCA 538
+ A T++++GF V+RT+ + ++ +T+ + Y+ P + A
Sbjct: 384 LLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQGHTLRSRPWGTPGNPESGA 443
Query: 539 AVCP-------PFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSL 591
P F +F +V +VFA QLMQV V+ E A ++D Y T SL
Sbjct: 444 MTSPNPLCSLLTFSDFNAGAIKNKAQSVREVFARQLMQVRGVSGEKAAALVDRYSTPASL 503
Query: 592 AHAYSILEGDVCA----QEEML 609
AY D CA QE +L
Sbjct: 504 LAAY-----DACATPKEQETLL 520
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 22/135 (16%)
Query: 110 KTKGTKRYMPQRNSVAYALLITLYRG--TTNGNEFMRKQDLIDAAEASGLSHTPIMPEKG 167
K G+ Y P R+S A +L+ LYR NG+ F+ K++L+ P G
Sbjct: 123 KAGGSGSYWPARHSGARVILLVLYREHLNPNGHHFLTKEELLQRCAQKSPRVAP-----G 177
Query: 168 KGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFAD 227
+P W +++L+ + LV+++ PA+Y LTP G E A++ G
Sbjct: 178 SARP-------------WPALRSLLHRNLVLRTHQPARYSLTPEGLELAQKLAESEGL-- 222
Query: 228 SIENVVNGKDSDKNE 242
S+ NV G E
Sbjct: 223 SLLNVGIGPKEPPGE 237
>sp|Q4WYE5|MUS81_ASPFU Crossover junction endonuclease mus81 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=mus81 PE=3 SV=1
Length = 596
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 148/313 (47%), Gaps = 50/313 (15%)
Query: 347 ISTNDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFK 406
I ND + ++ + + P+ +++ + L+LD RE V+ S+ R I N S+
Sbjct: 271 IQDNDRGRDPIDEIGIEPIILPA---NSFTIQLVLDTRE---VRSSKDRDYIANELSKKG 324
Query: 407 IQMEVRRLPVGDGIWIAR---------HRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRD 457
I EVR L +GD +W+AR + + +E +LD+IVERK++DDL SI+D R+ +
Sbjct: 325 ITPEVRALELGDAMWVARCNDPTFLSQYGEECNEVMLDWIVERKRMDDLLGSIKDGRFHE 384
Query: 458 QKLRLVRCGLKKLIYLVE--------GDPNSSEAAESIKTACFTTEILEGFDVQRTSGLA 509
QK RL R G+K +IYL+E G ++ + E + +A +T+++ G+ V++T L
Sbjct: 385 QKFRLRRSGIKNVIYLIEEFAITHDVGSASAMKYQEMMASAIASTQVVNGYFVKQTRNLD 444
Query: 510 DTLRKYGYITQAITEYYKVE--------LPEDQLKCA-----------------AVCPPF 544
DT+R +T + + Y +P QL A F
Sbjct: 445 DTIRYLARMTYLLQKMYCFSPPTHTLSLIPSRQLSSAQSYLTTLERLRARDPSVTYSVTF 504
Query: 545 DEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCA 604
F D +++ DVF LM VT E A+ + + T A+ L D
Sbjct: 505 STFSALTSKSDILSLRDVFLKMLMCTRGVTGEKALAIQKRWSTPREFVEAFERL--DEKG 562
Query: 605 QEEMLWKQSNNAV 617
+E+M+++++ V
Sbjct: 563 REDMVFERTKTLV 575
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 108 AVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKG 167
A K + K Y+P S YALL+ L N ++ + K LI+ A+ S P+
Sbjct: 104 AKKPRKAKPYVPSLRSGPYALLLGLATLDENASQGLTKAQLIEKAQPYCDSSFTAPPD-- 161
Query: 168 KGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPA-KYMLTPGGREAAR 217
P +Y+ W+ MKTL+ K LV + P +Y LT G E A+
Sbjct: 162 ----------PSKFYTAWNSMKTLLQKELVYEHGRPLRRYALTEEGWEVAK 202
>sp|Q640B4|MUS81_XENTR Crossover junction endonuclease MUS81 OS=Xenopus tropicalis
GN=mus81 PE=2 SV=1
Length = 612
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 138/282 (48%), Gaps = 32/282 (11%)
Query: 341 AASRTCISTNDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIEN 400
A S +T+ DP + V VP + + ++L +D E R + ++
Sbjct: 292 AYSHNAKNTSSDPPS-VQYNHVPEFTL---HPGDFNILLCVDFIETTGGAAHRKQELVTE 347
Query: 401 VCSQFKIQMEVRRLPVGDGIWIARHR----------QTQSEYVLDFIVERKKVDDLRSSI 450
+ + + +VR+L +GD +WIA+ + E VLD++VERK++DDL SI
Sbjct: 348 L-RRNGVNFDVRKLHIGDFLWIAQEKVQPVPGQLRIPQARELVLDYVVERKRMDDLCGSI 406
Query: 451 RDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAA---ESIKTACFTTEILEGFDVQRTSG 507
D R+R+QK RL RCGL++ IYLVE ++ + +++ A T++++GF ++RT
Sbjct: 407 IDGRFREQKFRLKRCGLRRPIYLVEDHGSAQHLSIPETTLQQAIVNTQVVDGFFIKRTKD 466
Query: 508 LADTLRKYGYITQAITEYYKVE-----LPEDQLKCAAVCPP---------FDEFLKRCQD 553
+ ++ +T+ + Y + E++ KC P F +F +
Sbjct: 467 VRESAAYLTIMTRYLQGIYSRKSLLSCTKEEEWKCDRSLRPDASSCILVEFKDFNEGAMK 526
Query: 554 LDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAY 595
TV +VFA QLMQ+ V+ E A +L+ Y T SL AY
Sbjct: 527 NKAQTVKEVFARQLMQISGVSGEKAAAILEKYSTPASLMSAY 568
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 17/106 (16%)
Query: 115 KRYMPQRNSVAYALLITLYRGTTNGNE--FMRKQDLIDAAEASGLSHTPIMPEKGKGKPR 172
+ Y+PQR S YA+L+TLYR T + + +M K +L EA L +
Sbjct: 147 REYVPQRRSGGYAVLLTLYRDTKSPSSRGYMTKAEL--QKEAQPLCD------------K 192
Query: 173 QFG-SSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAAR 217
F + P Y+ W+ + TLI K LV+K+ PA+Y LT G E A+
Sbjct: 193 SFTLTDPNSKYTAWTSVSTLIQKELVIKTHSPARYSLTEKGLELAQ 238
>sp|Q551H0|MUS81_DICDI Probable crossover junction endonuclease mus81 OS=Dictyostelium
discoideum GN=mus81 PE=3 SV=1
Length = 920
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 40/247 (16%)
Query: 380 ILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVE 439
I+D+RE V+ R I N ++ I +V++L +GD +W+A +E++L++I+E
Sbjct: 637 IIDNRE---VKSVTERDYICNKLNERGINAQVKKLELGDFVWVAIDEH-DNEWLLNYIIE 692
Query: 440 RKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE------------------GDPNSS 481
RK+VDDL SSI D RY++QK RL + G +IYL+E G N S
Sbjct: 693 RKRVDDLSSSIIDGRYKEQKFRLSKSGCDNIIYLIEGIVSNTINSSSQSQKKTWGTVNFS 752
Query: 482 EAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKCAAVC 541
+ +++ TA TT I EG ++ T + +T+ YI ITEY+K +L ++
Sbjct: 753 LSPDALATALVTTSICEGIIIKETKTIDNTI---DYIVN-ITEYFKEKLLKNNNSGGGGG 808
Query: 542 PPFDEFL-----KRC--QDLDKMT-------VSDVFAVQLMQVPQVTEEIAITVLDLYPT 587
+FL +C ++ +++ + + FA QL+Q+P + E A ++ +YPT
Sbjct: 809 DEIIKFLFANKNTQCTLENFNQLNSKSKGLKLIEFFATQLIQIPGCSAEKAHSITQVYPT 868
Query: 588 LLSLAHA 594
+SL A
Sbjct: 869 PMSLYLA 875
>sp|Q4INS6|MUS81_GIBZE Crossover junction endonuclease MUS81 OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MUS81
PE=3 SV=1
Length = 581
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 153/623 (24%), Positives = 252/623 (40%), Gaps = 146/623 (23%)
Query: 48 TLSKAYNNICDAKNPIKTLKDLSQVKGVG-KWILKLMQEFFETDSGGSEPEDLTAKSKKS 106
T AYN++ + L Q+KG G K +L Q+ + P +S+K+
Sbjct: 32 TYRTAYNSLKACPISFEHPAQLQQLKGFGPKLCERLEQQLKKHCEQNGLPMPPHPRSRKA 91
Query: 107 KAV--------------KTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAA 152
V K + K Y+P S A+AL++ L + M K +LI+ A
Sbjct: 92 APVTSDENGEGSSKPAKKARKQKAYVPALRSGAFALVVGLSTLDEDTATGMTKAELIEVA 151
Query: 153 EASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGG 212
+ + P S P +Y+ W+ MKTL+ K LV + G
Sbjct: 152 QPYC--------DASFSAP----SDPTKFYTAWNSMKTLLQKELVYER-----------G 188
Query: 213 REAARECLSRSGFADSIENVVNGKDSDKNELSELDLVLAHPDSNGEVTECFVP--LSRKE 270
R R L+ G+ E KD+D + +E D P S V F P +SR +
Sbjct: 189 RPLRRYALTDEGW----EVAKRIKDTDHWQ-AEKDRT-KDPTSAQPVIPNFQPGAISR-Q 241
Query: 271 KSTDVPFESLERFTRMGYSKEQVLRAFGEVSETSQHKEISSLWPAVLCRLQEDEVYALHS 330
KS V E++E +Q AL S
Sbjct: 242 KSPSV-----------------------EIAEPAQ---------------------AL-S 256
Query: 331 ELHSVREDYDAASRTCISTNDDPK-TRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAV 389
E +V D ++T+DD + +PP +F V L+LD RE V
Sbjct: 257 EYQNVVAD-------GLTTSDDASLPNFTPILLPPGTF--------TVQLVLDVRE---V 298
Query: 390 QGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQ---------SEYVLDFIVER 440
+ R ++ ++ + +R + +GD W+A+ E VLD+IVER
Sbjct: 299 RAKTDRDYMQEELAKQGAKPIMRSMELGDAQWVAKCNDPNLLSSQGAEGDEVVLDWIVER 358
Query: 441 KKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEG---DPNS-SEAAESIKTACFTTEI 496
K++DDL SI+D R+ +QK RL R G+KK+IY++E DP + AE++++A +T++
Sbjct: 359 KRLDDLIGSIKDGRFHEQKFRLQRSGVKKVIYIIEEIGMDPEVINRYAEAVRSAIASTQV 418
Query: 497 LEGFDVQRTSGLADTLRKYGYITQAITEYYKVE----LPEDQLKCAAVCP---------- 542
+ G+ V+RT+ + DT+R +T + Y+ +P L P
Sbjct: 419 VNGYFVKRTNKMDDTIRYLTRMTAMLKRTYESRSLHVIPTKVLTSQNYLPLLKHLRESIS 478
Query: 543 -----PFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSI 597
+ F + +T+ DVF LM + VT E A+ + + T A+
Sbjct: 479 PDWYITYPAFSSLASKSESITLRDVFLKMLMTIKGVTGEKALEIQKCWKTPYDFVKAFEA 538
Query: 598 L---EGDVCAQEEMLWKQSNNAV 617
E + + E+++ Q+++ V
Sbjct: 539 CGPGEQGLKRKRELVFSQTSHLV 561
>sp|Q5B8L2|MUS81_EMENI Crossover junction endonuclease mus81 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=mus81 PE=3 SV=1
Length = 677
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 141/317 (44%), Gaps = 63/317 (19%)
Query: 373 DAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIAR-------- 424
D + V LILD RE V+ S+ R I N + I EVR L VGD +W+A+
Sbjct: 362 DNFTVQLILDTRE---VRTSKDRDYISNELIRKGITPEVRALEVGDTMWVAKFHDPTFLR 418
Query: 425 -HRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVE------GD 477
+ + E +LD+IVERK++DDL SI+D R+ +QK RL R G+K +IYL+E +
Sbjct: 419 KYGEEGDEIMLDWIVERKRLDDLIGSIKDGRFHEQKFRLRRSGIKNVIYLIEEFAVTHHE 478
Query: 478 PNSSEAA---ESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQ 534
N++ A + + +A T+++ G+ V+RT L DT+R +T + Y P
Sbjct: 479 SNAAAAQKYHDMVASAIAQTQVVNGYFVKRTKNLDDTIRYLARMTFLLRNMYSAPSPPSS 538
Query: 535 LKCA------AVCP----------------------------PFDEFLKRCQDLDKMTVS 560
A A+ P F F D +T+
Sbjct: 539 RTSARPSHTLALLPTRHLALSSSHISALNTLRAENPHVTYGVTFPTFCAIASKSDALTLR 598
Query: 561 DVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEEMLWKQ------SN 614
D+F LM V+ + A+ + ++PT + A+ L D +E M+ +
Sbjct: 599 DIFLKMLMCTKGVSGDKALEIQRVWPTPQAFIRAFEELT-DPKQKENMVADRMAHVMVGR 657
Query: 615 NAVSASASRNIFQLVWG 631
++ SR I + VWG
Sbjct: 658 KKIAKVLSRKIAE-VWG 673
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 51 KAYNNICDAKNPIKTLKDLSQVKGVG-KWILKLMQEFFE--TDSGGSEPED-LTAKSKKS 106
KAY ++ + + Q+ G+G K +L + E + G PED TAK+ K
Sbjct: 114 KAYESMKACPLTFQHPSEAQQLNGLGPKLCERLTNKLKEYCKEHGLPMPEDPRTAKADKR 173
Query: 107 K----------AVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASG 156
K A K + K Y P S +AL++ L N N+ M K +LI+ A+
Sbjct: 174 KSTDGDTEGQPAKKARKPKPYAPALRSGPFALILALSSLDENSNQSMTKAELIEKAQPYC 233
Query: 157 LSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCP-AKYMLTPGGREA 215
S + S P +++ W+ MK L+TK LV P KY LT G E
Sbjct: 234 DSSFTV------------PSDPTKFFTAWNSMKILLTKELVYTRGHPLKKYSLTEEGWEV 281
Query: 216 AR 217
A+
Sbjct: 282 AK 283
>sp|Q59NG5|MUS81_CANAL Crossover junction endonuclease MUS81 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=MUS81 PE=3 SV=1
Length = 614
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 127/585 (21%), Positives = 229/585 (39%), Gaps = 143/585 (24%)
Query: 105 KSKAVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMP 164
K +K +Y+P+ S +A+LI LY + N M K+ +I A TP
Sbjct: 115 KRAKTSSKSKPKYVPKHRSGGFAILIALYLYDKDRNG-MTKERIIAGA-------TPYCD 166
Query: 165 EKGKGKPRQF--GSSPRDWYSGWSCMKTLITKGLVVKSS-CPAKYMLTPGGREAARECLS 221
R F ++ +++YS WS KTL L+ + P Y LT G A++ +
Sbjct: 167 -------RSFSNNAASKEFYSAWSSAKTLENHNLISTTGRSPKIYFLTDEGVSLAQQLKT 219
Query: 222 RSGFADSIENVVNGKDSDKNELSELDLVLAHPDSNGEVTECFVPLSRKEKSTDVPFESLE 281
G + E K +D+N +++ NG + LS + +
Sbjct: 220 AIGLSSPPEG---SKKNDRN------MIMEQSFDNGIRLDTSFELSSPAGRAMLSSSPIR 270
Query: 282 RFTRMGYSKEQVLRAF------GEVSETSQHKEISSLWPAVLCRLQEDEVYALHSELHSV 335
R + +S + + GE +SQH + ++ + + EV+
Sbjct: 271 RISNPVHSNRAIQKMLEKELRNGETPPSSQHDAGNRIYDGI-----KYEVW--------- 316
Query: 336 REDYDAASRTCISTNDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSR 395
R ED YEV++ +D+RE ++ R
Sbjct: 317 ----------------------------------RKED-YEVIVYMDNRE---IRSRADR 338
Query: 396 RIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRY 455
+ ++ EV+ L GD +W+ R+ T +E VL+++ ERK++DDL SI+D R+
Sbjct: 339 DHFQTRLQTLGVKCEVKPLSSGDVLWVGRNTSTGTEAVLNYLCERKRLDDLCDSIKDGRF 398
Query: 456 RDQKLRLVRCGLKKLIYLVEG------------DPNSSEAAESIKTA------------- 490
++QK R+ + G+K YLVE D S +++ TA
Sbjct: 399 QEQKNRMKKTGIKHCYYLVEDMVSYQDKVYDLMDSIQSSLTQTMTTARLYLRRFKDIDET 458
Query: 491 ----CFTTEILEGF----------DVQRTSGLADTLRKYGYITQAITEYYKVELPEDQ-- 534
T+++E D++ + L K+ ++ K + +D
Sbjct: 459 TAFIASNTKVIENLKSNLIVIKPQDIKNQQDYLNILLKFR------NKFEKTQPHQDNPD 512
Query: 535 LKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHA 594
+C + F + L + ++MTV ++F + LM + V+ E A+ + + +PT SL
Sbjct: 513 YECVQLFSRFQDMLGKT---NQMTVKEMFILMLMTIRGVSLEKAVVIQNRFPTPKSLLEY 569
Query: 595 YSILEG--DVCAQEEMLWKQ-----SNNAVSASASRNIFQLVWGK 632
Y D + +++ + N + + S I+ VWGK
Sbjct: 570 YHTEHATTDTNIKRDLMMNEFKDQIGNKKIGKALSEKIYN-VWGK 613
>sp|C0ZG86|SYI_BREBN Isoleucine--tRNA ligase OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=ileS PE=3 SV=1
Length = 925
Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 140 NEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVK 199
N+F ++ D++D SG SH ++ E+G P D Y GW + ++ G+ V
Sbjct: 516 NDFRKETDIMDVWFDSGSSHQAVLRERGIAWPADMYLEGSDQYRGW--FNSSLSTGVAVY 573
Query: 200 SSCPAKYMLTPG 211
+ P K +L+ G
Sbjct: 574 GTAPYKSVLSHG 585
>sp|P0CAF6|VF364_ASFK5 ERCC4 domain-containing protein EP364R OS=African swine fever virus
(isolate Pig/Kenya/KEN-50/1950) GN=Ken-071 PE=3 SV=1
Length = 366
Score = 39.7 bits (91), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 379 LILDDREQFAVQGSRS--RRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDF 436
L+ D RE + ++ + I +N + +I +E+++L GD + +S +
Sbjct: 4 LVADHREHHVIPFLKTDLQHIYQNPTQKKQIPLEIKQLFTGDYLI------CKSPSTILA 57
Query: 437 IVERKKVDDLRSSIRDNRYRD-QKLRLVRCGLK-KLIYLVEGD--PNSSEAAESIKTACF 492
+ERK D +S++D RY++ QK+ +R K +L + VEG PN + + A
Sbjct: 58 CIERKTYKDFAASLKDGRYKNRQKMLSLREQTKCQLYFFVEGPAFPNPQKKINHVAYASI 117
Query: 493 TTEI 496
T +
Sbjct: 118 ITAM 121
>sp|Q40272|VATE_MESCR V-type proton ATPase subunit E OS=Mesembryanthemum crystallinum
GN=VATE PE=2 SV=1
Length = 226
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 314 PAVLCRLQEDEVYALHSELHSVREDYDAASRTCISTNDDPKTRVNLLSVPP 364
PAVL R +E++ + +H LHS RE+Y + C+S P+ V+ + +PP
Sbjct: 128 PAVLLRCREEDKHHVHRVLHSAREEY--GEKACVS---HPEVIVDDIHLPP 173
>sp|Q87BL5|SYI_XYLFT Isoleucine--tRNA ligase OS=Xylella fastidiosa (strain Temecula1 /
ATCC 700964) GN=ileS PE=3 SV=1
Length = 943
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 86 FFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRK 145
F SG P S A+ + R Q + Y+L T GT +++ +
Sbjct: 495 FVHRHSGAPHPH--------SAALMRQIADRVQQQGVDIWYSLDQTELLGT-EADQYEKI 545
Query: 146 QDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAK 205
D++D SG++H ++ E+G KP D + GW ++ + G+ + ++ P K
Sbjct: 546 TDILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHRGW--FQSSLLTGVAMDNAAPYK 603
Query: 206 YMLTPG 211
LT G
Sbjct: 604 QCLTHG 609
>sp|B2I6V2|SYI_XYLF2 Isoleucine--tRNA ligase OS=Xylella fastidiosa (strain M23) GN=ileS
PE=3 SV=1
Length = 943
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 86 FFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRK 145
F SG P S A+ + R Q + Y+L T GT +++ +
Sbjct: 495 FVHRHSGAPHPH--------SAALMRQIADRVQQQGVDIWYSLDQTELLGT-EADQYEKI 545
Query: 146 QDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAK 205
D++D SG++H ++ E+G KP D + GW ++ + G+ + ++ P K
Sbjct: 546 TDILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHRGW--FQSSLLTGVAMDNAAPYK 603
Query: 206 YMLTPG 211
LT G
Sbjct: 604 QCLTHG 609
>sp|Q9PAS7|SYI_XYLFA Isoleucine--tRNA ligase OS=Xylella fastidiosa (strain 9a5c) GN=ileS
PE=3 SV=1
Length = 943
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 86 FFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRK 145
F SG P +S A+ + R Q + Y+L T GT +++ +
Sbjct: 495 FVHRHSGAPHP--------RSAALMRQVADRVEQQGVDIWYSLDQTELLGT-EADQYEKI 545
Query: 146 QDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAK 205
D++D SG++H ++ E+G KP D + GW ++ + G+ + ++ P K
Sbjct: 546 TDILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHRGW--FQSSLLTGVAMDNAAPYK 603
Query: 206 YMLTPG 211
LT G
Sbjct: 604 QCLTHG 609
>sp|B0U3Q9|SYI_XYLFM Isoleucine--tRNA ligase OS=Xylella fastidiosa (strain M12) GN=ileS
PE=3 SV=1
Length = 943
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 86 FFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRK 145
F SG P +S A+ + R Q + Y+L T GT +++ +
Sbjct: 495 FVHRHSGAPHP--------RSAALMRQIADRVEQQGVDIWYSLDQTELLGT-EADQYEKI 545
Query: 146 QDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAK 205
D++D SG++H ++ E+G KP D + GW ++ + G+ + ++ P K
Sbjct: 546 TDILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHRGW--FQSSLLTGVAMDNAAPYK 603
Query: 206 YMLTPG 211
LT G
Sbjct: 604 QCLTHG 609
>sp|P0CAF7|VF364_ASFM2 ERCC4 domain-containing protein EP364R OS=African swine fever virus
(isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-067 PE=3 SV=1
Length = 383
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 379 LILDDREQFAVQGSRS--RRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDF 436
L+ D RE + ++ + +N + + +E+++L GD + +S +
Sbjct: 4 LVADHREHHVIPFLKTDFHHMHQNPIQKNQALLEIKQLFTGDYLI------CKSPSTILA 57
Query: 437 IVERKKVDDLRSSIRDNRYRD-QKLRLVRCGLK-KLIYLVEGD--PNSSEAAESIKTACF 492
+ERK D +S++D RY++ QK+ L+R K +L + VEG PN + + A
Sbjct: 58 CIERKTYKDFAASLKDGRYQNRQKMLLLREQTKCQLYFFVEGPAFPNPQKKINHVAYASI 117
Query: 493 TTEI 496
T +
Sbjct: 118 ITAM 121
>sp|Q8PN19|SYI_XANAC Isoleucine--tRNA ligase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=ileS PE=3 SV=1
Length = 943
Score = 36.2 bits (82), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 136 TTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKG 195
++ ++ + D++D SG++H ++P++G KP D + GW ++ + G
Sbjct: 536 SSEAADYEKITDILDVWFDSGVTHEAVLPDRGLPKPADLYLEGSDQHRGW--FQSSLLSG 593
Query: 196 LVVKSSCPAKYMLTPG 211
+ + + P K LT G
Sbjct: 594 VAMDKAAPYKQCLTHG 609
>sp|B9DPP7|SYI_STACT Isoleucine--tRNA ligase OS=Staphylococcus carnosus (strain TM300)
GN=ileS PE=3 SV=1
Length = 915
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 135 GTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTLIT 193
G+ NG EF +++D++D SG SH ++ + + P D Y GW + IT
Sbjct: 512 GSPNG-EFTKEEDIMDVWFDSGSSHRGVLETRPELSFPADLYLEGSDQYRGW--FNSSIT 568
Query: 194 KGLVVKSSCPAKYMLTPG 211
+ + P K++L+ G
Sbjct: 569 TAVATRGQSPYKFLLSHG 586
>sp|Q3BW42|SYI_XANC5 Isoleucine--tRNA ligase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=ileS PE=3 SV=1
Length = 943
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 141 EFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKS 200
++ + D++D SG++H ++P++G KP D + GW ++ + G+ +
Sbjct: 541 DYEKITDILDVWFDSGVTHEAVLPDRGLPKPADLYLEGSDQHRGW--FQSSLLSGVAMDK 598
Query: 201 SCPAKYMLTPG 211
+ P K LT G
Sbjct: 599 AAPYKQCLTHG 609
>sp|Q8CSX1|SYI_STAES Isoleucine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=ileS PE=3 SV=1
Length = 916
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 135 GTTNGNEFMRKQDLIDAAEASGLSHTPIM---PEKGKGKPRQFGSSPRDWYSGWSCMKTL 191
G+ NG EF ++ D++D SG SH ++ PE F S D Y GW +
Sbjct: 512 GSPNG-EFTKETDIMDVWFDSGSSHRGVLETRPELSFPADLYFEGS--DQYRGW--FNSS 566
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
IT + + P K++L+ G
Sbjct: 567 ITTAVATRGQAPYKFLLSHG 586
>sp|Q5HPZ9|SYI_STAEQ Isoleucine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=ileS PE=3 SV=1
Length = 916
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 135 GTTNGNEFMRKQDLIDAAEASGLSHTPIM---PEKGKGKPRQFGSSPRDWYSGWSCMKTL 191
G+ NG EF ++ D++D SG SH ++ PE F S D Y GW +
Sbjct: 512 GSPNG-EFTKETDIMDVWFDSGSSHRGVLETRPELSFPADLYFEGS--DQYRGW--FNSS 566
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
IT + + P K++L+ G
Sbjct: 567 ITTAVATRGQAPYKFLLSHG 586
>sp|Q846V6|SYI_STAEP Isoleucine--tRNA ligase OS=Staphylococcus epidermidis GN=ileS PE=3
SV=1
Length = 871
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 135 GTTNGNEFMRKQDLIDAAEASGLSHTPIM---PEKGKGKPRQFGSSPRDWYSGWSCMKTL 191
G+ NG EF ++ D++D SG SH ++ PE F S D Y GW +
Sbjct: 512 GSPNG-EFTKETDIMDVWFDSGSSHRGVLETRPELSFPADLYFEGS--DQYRGW--FNSS 566
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
IT + + P K++L+ G
Sbjct: 567 ITTAVATRGQAPYKFLLSHG 586
>sp|Q8SSE8|HSP82_ENCCU Heat shock protein 90 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=HSP90 PE=1 SV=1
Length = 690
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Query: 512 LRKY-GYITQAITEYYKVELPEDQLKCAAVCPPFDEFLKRCQDL-----DKMTVSDVFAV 565
L+KY G+ Q IT VELPED+ V F+EF K+ +D+ +K+TV+
Sbjct: 518 LKKYKGHTIQRITSE-GVELPEDEASNEEVVKSFEEFCKKVKDILSSKVEKVTVNP---- 572
Query: 566 QLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCA 604
+L+ VP V I+ T L T+ ++ + + E + A
Sbjct: 573 RLVSVPAV---ISTTKYSLSGTMENIMKSQPVTEANPFA 608
>sp|Q8K9H5|PNP_BUCAP Polyribonucleotide nucleotidyltransferase OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=pnp PE=3 SV=1
Length = 707
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 232 VVNGKDSDKNELSELDLVLAHPDSNGEVTECFVPLSRKEKSTD-VPFESLERFTRMGYSK 290
V+N S NE S+L ++++P+ N E+ L+ K+ S + F ER+ ++ + K
Sbjct: 215 VINNIRSLSNEASKLPWIISYPEINTELELKITKLAEKDISNAYLIFNKQERYEKLNFLK 274
Query: 291 EQVLRAF 297
E++++ F
Sbjct: 275 EEIIKLF 281
>sp|B4SP18|SYI_STRM5 Isoleucine--tRNA ligase OS=Stenotrophomonas maltophilia (strain
R551-3) GN=ileS PE=3 SV=1
Length = 943
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 141 EFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKS 200
++ + D++D SG++H ++ +G GKP D + GW ++ + G+ +
Sbjct: 541 DYEKVTDILDVWFDSGVTHEGVLAARGFGKPADLYLEGSDQHRGW--FQSSLLTGVAIDK 598
Query: 201 SCPAKYMLTPG 211
P K LT G
Sbjct: 599 RAPYKQCLTHG 609
>sp|Q3IEA2|SYI_PSEHT Isoleucine--tRNA ligase OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=ileS PE=3 SV=1
Length = 942
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 18/178 (10%)
Query: 86 FFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRK 145
F + D+G P + ++ V+ G + + Y L G + ++M+
Sbjct: 483 FADKDTGAIHPNTQELIEQAAQLVEKSGIQAW--------YDLDPATLLGEEDAKQYMKV 534
Query: 146 QDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPA 204
QD +D SG+SH ++ + P D + GW M +++T + + P
Sbjct: 535 QDTLDVWFDSGVSHACVVDAREDLTGPADLYLEGSDQHRGW-FMSSMMTS-VAINGHAPY 592
Query: 205 KYMLTPGGR--EAARECLSRSGFADSIENVVNGKDSDKNELSELDLVLAHPDSNGEVT 260
+ +LT G E R+ G S +NV+N +D L L +A D E+T
Sbjct: 593 RQVLTHGFTVDENGRKMSKSLGNVISPQNVMNKLGADI-----LRLWVASTDYTAEMT 645
>sp|B2FTJ0|SYI_STRMK Isoleucine--tRNA ligase OS=Stenotrophomonas maltophilia (strain
K279a) GN=ileS PE=3 SV=1
Length = 943
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 141 EFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKS 200
++ + D++D SG++H ++ +G GKP D + GW ++ + G+ +
Sbjct: 541 DYEKVTDILDVWFDSGVTHEGVLAARGFGKPADLYLEGSDQHRGW--FQSSLLTGVAIDK 598
Query: 201 SCPAKYMLTPG 211
P K LT G
Sbjct: 599 RAPYKQCLTHG 609
>sp|Q65JV7|SYI_BACLD Isoleucine--tRNA ligase OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=ileS PE=3 SV=1
Length = 922
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 133 YRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTL 191
+ G+ NG +F ++QD++D SG SH ++ E+ +P D Y GW +
Sbjct: 509 HPGSPNG-KFTKEQDIMDVWFDSGSSHQAVLEEREDLVRPADLYLEGSDQYRGW--FNSS 565
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
I+ + V P K +L+ G
Sbjct: 566 ISTAVAVTGKAPYKGVLSHG 585
>sp|Q636D1|SYI1_BACCZ Isoleucine--tRNA ligase 1 OS=Bacillus cereus (strain ZK / E33L)
GN=ileS1 PE=3 SV=1
Length = 921
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 133 YRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTL 191
++G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW +
Sbjct: 508 HQGSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSS 564
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
++ + V P K +L+ G
Sbjct: 565 LSTAVAVTGKAPYKGVLSHG 584
>sp|Q45477|SYI_BACSU Isoleucine--tRNA ligase OS=Bacillus subtilis (strain 168) GN=ileS
PE=3 SV=3
Length = 921
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 133 YRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTL 191
+ G+ NG F ++QD++D SG SH ++ E+ +P D Y GW +
Sbjct: 509 HPGSPNGT-FTKEQDIMDVWFDSGSSHQAVLEERDDLVRPADLYLEGSDQYRGW--FNSS 565
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
++ + V P K +L+ G
Sbjct: 566 LSTAVAVTGKAPYKGVLSHG 585
>sp|B9IVX2|SYI_BACCQ Isoleucine--tRNA ligase OS=Bacillus cereus (strain Q1) GN=ileS PE=3
SV=1
Length = 921
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 133 YRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTL 191
+ G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW +
Sbjct: 508 HSGSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSS 564
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
++ + V P K +L+ G
Sbjct: 565 LSTAVAVTGKAPYKGVLSHG 584
>sp|B7HLM9|SYI_BACC7 Isoleucine--tRNA ligase OS=Bacillus cereus (strain AH187) GN=ileS
PE=3 SV=1
Length = 921
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 133 YRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTL 191
+ G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW +
Sbjct: 508 HSGSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSS 564
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
++ + V P K +L+ G
Sbjct: 565 LSTAVAVTGKAPYKGVLSHG 584
>sp|Q49WX5|SYI_STAS1 Isoleucine--tRNA ligase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=ileS
PE=3 SV=1
Length = 916
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 135 GTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTLIT 193
G+ NG EF ++ D++D SG SH ++ + + P D Y GW + IT
Sbjct: 512 GSPNG-EFTKETDIMDVWFDSGSSHRGVLEARPELSYPADLYLEGSDQYRGW--FNSSIT 568
Query: 194 KGLVVKSSCPAKYMLTPG 211
+ + P K +L+ G
Sbjct: 569 TSVATRGQSPYKMLLSHG 586
>sp|C3L730|SYI_BACAC Isoleucine--tRNA ligase OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=ileS PE=3 SV=1
Length = 921
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 135 GTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTLIT 193
G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW + ++
Sbjct: 510 GSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSSLS 566
Query: 194 KGLVVKSSCPAKYMLTPG 211
+ V P K +L+ G
Sbjct: 567 TAVAVTGKAPYKGVLSHG 584
>sp|C3P665|SYI_BACAA Isoleucine--tRNA ligase OS=Bacillus anthracis (strain A0248)
GN=ileS PE=3 SV=1
Length = 921
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 135 GTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTLIT 193
G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW + ++
Sbjct: 510 GSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSSLS 566
Query: 194 KGLVVKSSCPAKYMLTPG 211
+ V P K +L+ G
Sbjct: 567 TAVAVTGKAPYKGVLSHG 584
>sp|Q81WE4|SYI1_BACAN Isoleucine--tRNA ligase 1 OS=Bacillus anthracis GN=ileS1 PE=3 SV=1
Length = 921
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 135 GTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTLIT 193
G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW + ++
Sbjct: 510 GSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSSLS 566
Query: 194 KGLVVKSSCPAKYMLTPG 211
+ V P K +L+ G
Sbjct: 567 TAVAVTGKAPYKGVLSHG 584
>sp|C1EPQ9|SYI_BACC3 Isoleucine--tRNA ligase OS=Bacillus cereus (strain 03BB102) GN=ileS
PE=3 SV=1
Length = 921
Score = 33.1 bits (74), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 133 YRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTL 191
+ G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW +
Sbjct: 508 HPGSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSS 564
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
++ + V P K +L+ G
Sbjct: 565 LSTAVAVTGKAPYKGVLSHG 584
>sp|Q6HER9|SYI1_BACHK Isoleucine--tRNA ligase 1 OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=ileS1 PE=3 SV=1
Length = 921
Score = 33.1 bits (74), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 133 YRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTL 191
+ G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW +
Sbjct: 508 HPGSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSS 564
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
++ + V P K +L+ G
Sbjct: 565 LSTAVAVTGKAPYKGVLSHG 584
>sp|B7JJY2|SYI_BACC0 Isoleucine--tRNA ligase OS=Bacillus cereus (strain AH820) GN=ileS
PE=3 SV=1
Length = 921
Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 133 YRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGK-GKPRQFGSSPRDWYSGWSCMKTL 191
+ G+ NG EF ++ D++D SG SH ++ E+ +P D Y GW +
Sbjct: 508 HPGSPNG-EFRKETDIMDVWFDSGSSHQAVLEERDDLQRPADLYLEGSDQYRGW--FNSS 564
Query: 192 ITKGLVVKSSCPAKYMLTPG 211
++ + V P K +L+ G
Sbjct: 565 LSTAVAVTGKAPYKGVLSHG 584
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,874,694
Number of Sequences: 539616
Number of extensions: 9462120
Number of successful extensions: 25093
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 24988
Number of HSP's gapped (non-prelim): 97
length of query: 632
length of database: 191,569,459
effective HSP length: 124
effective length of query: 508
effective length of database: 124,657,075
effective search space: 63325794100
effective search space used: 63325794100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)