Citrus Sinensis ID: 006771

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630--

MIELIEMENHSKRRVVCAENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKNPIKTLKDLSQVKGVGKWILKLMQEFFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQRNSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSDKNELSELDLVLAHPDSNGEVTECFVPLSRKEKSTDVPFESLERFTRMGYSKEQVLRAFGEVSETSQHKEISSLWPAVLCRLQEDEVYALHSELHSVREDYDAASRTCISTNDDPKTRVNLLSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEEMLWKQSNNAVSASASRNIFQLVWGK

ccccEEccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHcccccHHHHHHHHHHHHHcccccccccccHHHHcccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccEEEcccccHHHHHHHHHHcccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccHcccccccHHHHHHHcccccccccccccccccHHHHccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccHHHHHHHHHHccccEEEEEcccccEEEEEEccccccEEEccEEEEEccHHHHHHHHcccHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccHHHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHcc

*IEL***********VC**NEELAMYMLQKRQEMA**********DMTLSKAYNNICDAKNPIKTLKDLSQVKGVGKWILKLMQ*************************************NSVAYALLITLYRGTTNGNEFMR****IDAAE**************************DWYSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLS*************************************VTECFVP**********************************************************************************************LSVPPLSFGERFEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQSEYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKCAAVCPPFDEFLKRCQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEEMLWKQSNNAV***ASRNIFQLVWGK

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Crossover junction endonuclease MUS81	Interacts with EME1 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks, nicked Holliday junctions and also intact Holliday junctions with a reduced efficiency. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. Plays a role in DNA repair and in genotoxic stress-induced homologous recombination (HR) in somatic cells. Mediates a subset of meiotic recombination events that are insensitive to crossover interference.	probable	Q5W9E7

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZIU, chain A
Confidence level:very confident
Coverage over the Query: 359-631
View the alignment between query and template
View the model in PyMOL

Template: 2KP7, chain A
Confidence level:confident
Coverage over the Query: 13-91
View the alignment between query and template
View the model in PyMOL

Template: 2ESH, chain A
Confidence level:probable
Coverage over the Query: 124-162,177-221
View the alignment between query and template
View the model in PyMOL