BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006772
(632 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 126/298 (42%), Gaps = 35/298 (11%)
Query: 37 RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
+PW I SLKL+ ++G G FG+VW+AT ++++ ++AVK + P
Sbjct: 176 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----G 223
Query: 91 KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
+ V F E K + + LH + V I I +F +GS+ D + G K P
Sbjct: 224 SMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 282
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
LP ++ + Q+A+G++ + + DFG L R + D+
Sbjct: 283 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-----LARVIEDN 337
Query: 208 DMALRLGTP---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
+ R G + APE G + ++D W FG +ME++T G P+ G S E+
Sbjct: 338 EYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 394
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE 321
++ P P P + N+++ C++ RP I + A + E
Sbjct: 395 IRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXE 451
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 38/290 (13%)
Query: 37 RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
+PW I SLKL+ ++G G FG+VW+AT ++++ ++AVK + P
Sbjct: 3 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----G 50
Query: 91 KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
+ V F E K + + LH + V I I +F +GS+ D + G K P
Sbjct: 51 SMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 109
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
LP ++ + Q+A+G++ + + DFG L R + D+
Sbjct: 110 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG-----LARVIEDN 164
Query: 208 DMALRLGTP---NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
+ R G + APE G + ++D W FG +ME++T G P+ G S E+
Sbjct: 165 EYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 221
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFE 310
++ P P P + N+++ C++ RP + +L FE
Sbjct: 222 IRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
PW D L +K +IG G FG V A H S ++AVK+L+ ++D VN+F
Sbjct: 35 PWCD---LNIKEKIGAGSFGTVHRAEWHGS--------DVAVKILM--EQDFHAERVNEF 81
Query: 98 EE---LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRY 154
+ + R V ++ ++ + GS+ R+ + G + L + R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRL 140
Query: 155 GI--QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG--DFGIPYLLLGRSLSDSDMA 210
+ +AKG++ LH+ + + DFG+ L LS A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
GTP +MAPE E P + ++D + FG + E+ T QPW + ++ +V K
Sbjct: 201 ---GTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
Query: 271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
++ IP L P V +I GC+ + RP A I+
Sbjct: 255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 24/270 (8%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GNMSPEAFLQE-AQVMKK 236
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 237 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 295
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG LGR + D++ R G P +
Sbjct: 296 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LGRLIEDNEYTARQGAK---FPIK 347
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 406
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAF 309
P ++ +++ C+ D RP + L AF
Sbjct: 407 CPESLHDLMCQCWRKDPEERPTF-EYLQAF 435
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 38 PWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
PW D L +K +IG G FG V A H S ++AVK+L+ ++D VN+F
Sbjct: 35 PWCD---LNIKEKIGAGSFGTVHRAEWHGS--------DVAVKILM--EQDFHAERVNEF 81
Query: 98 EE---LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRY 154
+ + R V ++ ++ + GS+ R+ + G + L + R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRL 140
Query: 155 GI--QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG--DFGIPYLLLGRSLSDSDMA 210
+ +AKG++ LH+ + + DFG+ L L A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 211 LRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIK 270
GTP +MAPE E P + ++D + FG + E+ T QPW + ++ +V K
Sbjct: 201 ---GTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
Query: 271 KEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
++ IP L P V +I GC+ + RP A I+
Sbjct: 255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 49/298 (16%)
Query: 37 RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
+PW I SLKL+ ++G G FG+VW+AT ++++ ++AVK + P
Sbjct: 170 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKP-----G 217
Query: 91 KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
+ V F E K + + LH + V I I +F +GS+ D + G K P
Sbjct: 218 SMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 276
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
LP ++ + Q+A+G++ + E + D +L+ SL
Sbjct: 277 LPKLIDFSAQIAEGMAFI------------------EQRNYIHRDLRAANILVSASLVCK 318
Query: 208 DMALRLGTPNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
L P +W PE G + ++D W FG +ME++T G P+ G S E+
Sbjct: 319 IADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 378
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGE 321
++ P P P + N+++ C+ +NRP +S + Y E
Sbjct: 379 IRALERGYRMPR-PENCPEELYNIMMRCW----KNRPEERPTFEYIQSVLDDFYTATE 431
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
R + V L+ + V I I +++ +GS+ D + + G L LP ++ Q+A G+
Sbjct: 70 LRHEKLV-QLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 163 SDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
+ + + E+ + DFG L R + D++ R G P
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEXTARQGAK---FPI 179
Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
+W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PP 238
Query: 279 GLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 28/286 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
R + V L+ + V I I M++ +G + D + + G L LP ++ Q+A G+
Sbjct: 70 LRHEKLV-QLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 163 SDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
+ + + E+ + DFG L R + D++ R G P
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPI 179
Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
+W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PP 238
Query: 279 GLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
R + V L+ + V I I +++ +GS+ D + + G L LP ++ Q+A G+
Sbjct: 70 LRHEKLV-QLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 163 SDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE 222
+ + + E+ + DFG L R + D++ R G P
Sbjct: 128 AYVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPI 179
Query: 223 QW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
+W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PP 238
Query: 279 GLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 58
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 59 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 117
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 118 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 169
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 228
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 273
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 70 LRHEKLV-QLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 70 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 129 YVERMNYVHRDLAAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 70 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 70 IRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 60
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 61 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 119
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 120 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 171
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 230
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 231 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 275
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ DR+ + +G L L + RY +Q+A+G+ L S D + +G
Sbjct: 99 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
DFG L R+L +D M P + APE + S +DTW FG ++
Sbjct: 158 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 209
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
EM T G +PW G + +I H + + E+ P P + NV++ C+ + +RP +
Sbjct: 210 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
Query: 306 LHAFESSQNAVYNDGEWTGLGSRALTDTSSVKGYTAWYPLKDHLQVGDTV 355
+Q RAL D P K H+Q+ D +
Sbjct: 270 RDFLLEAQPT----------DMRALQDFEE--------PDKLHIQMNDVI 301
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 37/298 (12%)
Query: 37 RPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
+PW I S+KL R+G G FG+VW+ ++ S ++AVK L P
Sbjct: 1 KPWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNST-------KVAVKTLKP-----G 48
Query: 91 KVFVNKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLP 147
+ V F E K + + L+ + I I ++ +GS+ D + GGK+
Sbjct: 49 TMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL 108
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
LP ++ + Q+A+G++ + E + DFG L R + D+
Sbjct: 109 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG-----LARVIEDN 163
Query: 208 DMALRLGTPNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
+ R G P +W PE G + ++D W FG + E++T G P+ G++ ++
Sbjct: 164 EYTAREGAK---FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADV 220
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
++ P + P + +++ C++ RP + +L F ++ Y
Sbjct: 221 MTALSQGYRMPRV-ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQ 277
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L R+G G FG+VW+ T + + ++A+K L P + F+ + ++ K
Sbjct: 10 SLQLIKRLGNGQFGEVWMGTWNGNT-------KVAIKTLKP-GTMSPESFLEE-AQIMKK 60
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
+ + V L+ + + +GS+ D + G L LP+++ Q+A G++
Sbjct: 61 LKHDKLV-QLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + + DFG L R + D++ R G P +
Sbjct: 120 YIERMNYIHRDLRSANILVGNGLICKIADFG-----LARLIEDNEXTARQGAK---FPIK 171
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E++T G P+ G + E+ V PC P
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC-PQD 230
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ ++I C++ D RP + L + ++ Y GE
Sbjct: 231 CPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPGE 275
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 318
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 319 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 378 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGA---KFPIK 429
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE- 488
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAF 309
P ++ +++ C+ + RP + L AF
Sbjct: 489 CPESLHDLMCQCWRKEPEERPTF-EYLQAF 517
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 235
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 236 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 346
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 405
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ + RP + L + +S Y GE
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 450
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ DR+ + +G L L + RY +Q+A+G+ L S D + +G
Sbjct: 99 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
DFG L R+L +D M P + APE + S +DTW FG ++
Sbjct: 158 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 209
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
EM T G +PW G + +I H + + E+ P P + NV++ C+ + +RP
Sbjct: 210 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ DR+ + +G L L + RY +Q+A+G+ L S D + +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
DFG L R+L +D M P + APE + S +DTW FG ++
Sbjct: 154 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 205
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
EM T G +PW G + +I H + + E+ P P + NV++ C+ + +RP
Sbjct: 206 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ DR+ + +G L L + RY +Q+A+G+ L S D + +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
DFG L R+L +D M P + APE + S +DTW FG ++
Sbjct: 154 DFG-----LMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 205
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
EM T G +PW G + +I H + + E+ P P + NV++ C+ + +RP
Sbjct: 206 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ DR+ + +G L L + RY +Q+A+G+ L S D + +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
DFG L R+L +D M P + APE + S +DTW FG ++
Sbjct: 164 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 215
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
EM T G +PW G + +I H + + E+ P P + NV++ C+ + +RP
Sbjct: 216 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ DR+ + +G L L + RY +Q+A+G+ L S D + +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
DFG L R+L +D M P + APE + S +DTW FG ++
Sbjct: 164 DFG-----LMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 215
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
EM T G +PW G + +I H + + E+ P P + NV++ C+ + +RP
Sbjct: 216 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ DR+ + +G L L + RY +Q+A+G+ L S D + +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 192 DFGIPYLLLGRSLSDSD----MALRLGTP-NYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
DFG L R+L +D M P + APE + S +DTW FG ++
Sbjct: 154 DFG-----LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLW 205
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
EM T G +PW G + +I H + + E+ P P + NV++ C+ + +RP
Sbjct: 206 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 115/292 (39%), Gaps = 17/292 (5%)
Query: 41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
DP+ +L +G+G FG V+L + D H A+K+L K E
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLV---RKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
V LH GK+ + + F G GD + + D+ Y +LA
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELA 140
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
G+ LHS+G E + L DFG+ ++ A GT Y
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KEAIDHEKKAYSFCGTVEY 196
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
MAPE R S D W +G + EMLTG P+ GK +E +I K K +P
Sbjct: 197 MAPEVVN---RQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETM--TLILKAKLGMPQ 251
Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRAL 330
L ++++ F+ + NR L + A E ++ Y+ +W L R +
Sbjct: 252 FLSTEAQSLLRALFKRNPANR-LGSGPDGAEEIKRHVFYSTIDWNKLYRREI 302
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 235
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 236 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 346
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 405
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAF 309
P ++ +++ C+ + RP + L AF
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTF-EYLQAF 434
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 235
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 236 LRHEKLV-QLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 346
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 405
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILHAF 309
P ++ +++ C+ + RP + L AF
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTF-EYLQAF 434
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 119/285 (41%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 69
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +G + D + + G L LP ++ Q+A G++
Sbjct: 70 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 180
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 239
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ D RP + L + +S Y GE
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 62
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 63 LRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 121
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 122 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 173
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 232
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ + RP + L + +S Y GE
Sbjct: 233 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 277
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 66
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 67 LRHEKLV-QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEYTARQGAK---FPIK 177
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 236
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ + RP + L + +S Y GE
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 59
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 60 LRHEKLV-QLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 118
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 119 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEXTARQGAK---FPIK 170
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 229
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ + RP + L + +S Y GE
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 274
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 26/285 (9%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
SL+L+ ++G+G FG+VW+ T + + +A+K L P + F+ + ++ K
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKP-GTMSPEAFLQE-AQVMKK 66
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
R + V L+ + + +GS+ D + + G L LP ++ Q+A G++
Sbjct: 67 LRHEKLV-QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
+ + E+ + DFG L R + D++ R G P +
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFG-----LARLIEDNEWTARQGAK---FPIK 177
Query: 224 W---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
W E + G + ++D W FG + E+ T G P+ G E+ V PC P
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPE 236
Query: 280 LPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYNDGE 321
P ++ +++ C+ + RP + L + +S Y GE
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 115/292 (39%), Gaps = 17/292 (5%)
Query: 41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
DP+ +L +G+G FG V+L +D Y A+K+L K E
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY---AMKVLKKATLKVRDRVRTKMERD 79
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
+ LH GK+ + + F G GD + + D+ Y +LA
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELA 137
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
+ LHS+G E + L DFG+ S+ A GT Y
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KESIDHEKKAYSFCGTVEY 193
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
MAPE RG D W FG + EMLTG P+ GK +E +I K K +P
Sbjct: 194 MAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETM--TMILKAKLGMPQ 248
Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRAL 330
L P ++++ F+ + NR L A E +++ ++ +W L R +
Sbjct: 249 FLSPEAQSLLRMLFKRNPANR-LGAGPDGVEEIKRHSFFSTIDWNKLYRREI 299
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 115/292 (39%), Gaps = 17/292 (5%)
Query: 41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
DP+ +L +G+G FG V+L +D Y A+K+L K E
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY---AMKVLKKATLKVRDRVRTKMERD 78
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
+ LH GK+ + + F G GD + + D+ Y +LA
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
+ LHS+G E + L DFG+ S+ A GT Y
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KESIDHEKKAYSFCGTVEY 192
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
MAPE RG D W FG + EMLTG P+ GK +E +I K K +P
Sbjct: 193 MAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETM--TMILKAKLGMPQ 247
Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRAL 330
L P ++++ F+ + NR L A E +++ ++ +W L R +
Sbjct: 248 FLSPEAQSLLRMLFKRNPANR-LGAGPDGVEEIKRHSFFSTIDWNKLYRREI 298
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 115/292 (39%), Gaps = 17/292 (5%)
Query: 41 DPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL 100
DP+ +L +G+G FG V+L +D Y A+K+L K E
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY---AMKVLKKATLKVRDRVRTKMERD 78
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLA 159
+ LH GK+ + + F G GD + + D+ Y +LA
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNY 218
+ LHS+G E + L DFG L S+ A GT Y
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG----LSKESIDHEKKAYSFCGTVEY 192
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
MAPE RG D W FG + EMLTG P+ GK +E +I K K +P
Sbjct: 193 MAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETM--TMILKAKLGMPQ 247
Query: 279 GLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDGEWTGLGSRAL 330
L P ++++ F+ + NR L A E +++ ++ +W L R +
Sbjct: 248 FLSPEAQSLLRMLFKRNPANR-LGAGPDGVEEIKRHSFFSTIDWNKLYRREI 298
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 21/267 (7%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQ 108
+G G G VW ++ H +AVK + KE+ ++ ++ ++ K +
Sbjct: 33 MGSGTCGQVWKMRFRKTG------HVIAVKQMRRSGNKEENKRILMDL--DVVLKSHDCP 84
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
+ G + N + IAM+ G+ +++ ++ G +P + + + + K + L
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 169 -GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
G E Q+ L DFGI GR + D G YMAPE+ +P
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGIS----GRLVDDKAKDRSAGCAAYMAPERIDPP 199
Query: 228 --VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS--GLPPA 283
+ D W G S++E+ TG P+ + + V+++E P +P G
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
Query: 284 VENVIIGCFEYDLRNRPLMADIL-HAF 309
++ + C D R RP +L H+F
Sbjct: 260 FQSFVKDCLTKDHRKRPKYNKLLEHSF 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 31/285 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELF 101
S+KL ++G G FG+VW+ ++ S ++AVK L P + V F E
Sbjct: 13 SIKLVKKLGAGQFGEVWMGYYNNST-------KVAVKTLKP-----GTMSVQAFLEEANL 60
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
K + + L+ + I I +F +GS+ D + GGK+ LP ++ + Q+A+
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + E + DFG L R + D++ R G
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFG-----LARVIEDNEYTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + +++ W FG + E++T G P+ G++ ++ ++ P +
Sbjct: 173 PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM 232
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
P + +++ C++ RP + +L F ++ Y
Sbjct: 233 -ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQ 276
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 25/282 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL-PLKEDCAKVFVNKFE 98
ID L L+ IG G FG V+ A F E+AVK ED ++ N +
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRA--------FWIGDEVAVKAARHDPDEDISQTIENVRQ 55
Query: 99 E--LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDIL-RYG 155
E LF + + L G+ + +C+ M+F G +R+ G ++P PDIL +
Sbjct: 56 EAKLFAMLKHPNIIA-LRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIP-PDILVNWA 111
Query: 156 IQLAKGISDLHS------IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM 209
+Q+A+G++ LH I E+ L I L R +
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171
Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
G +MAPE + S +D W +G + E+LTG P+ G + + V +
Sbjct: 172 MSAAGAYAWMAPEVIRASM---FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
Query: 270 KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
K IPS P ++ C+ D +RP +IL +
Sbjct: 229 NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 109/277 (39%), Gaps = 39/277 (14%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
L +G+G FG V+LA ++ F A+K LK+D V ++ E +
Sbjct: 21 LHKMLGKGSFGKVFLAEFKKTNQFF------AIK---ALKKDV--VLMDDDVECTMVEKR 69
Query: 107 SQSVCWLHGISV-------INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQL 158
S+ W H + M++ G GD + Q K L Y ++
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFDLSRATFYAAEI 127
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
G+ LHS G + + + DFG + L D+ GTP+Y
Sbjct: 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGDAKTNXFCGTPDY 184
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
+APE + + D W FG + EML G P+ G+ EE++HS I+ + P P
Sbjct: 185 IAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS--IRMDNPFYPR 239
Query: 279 GLPPAVENVIIGCFEY----------DLRNRPLMADI 305
L +++++ F D+R PL +I
Sbjct: 240 WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 110/280 (39%), Gaps = 39/280 (13%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPK 103
+L +G+G FG V+LA ++ F A+K LK+D V ++ E
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFF------AIK---ALKKDV--VLMDDDVECTMV 67
Query: 104 FRESQSVCWLHGISV-------INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYG 155
+ S+ W H + M++ G GD + Q K L Y
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFDLSRATFYA 125
Query: 156 IQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGT 215
++ G+ LHS G + + + DFG + L D+ GT
Sbjct: 126 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGDAKTNEFCGT 182
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC 275
P+Y+APE + + D W FG + EML G P+ G+ EE++HS I+ + P
Sbjct: 183 PDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS--IRMDNPF 237
Query: 276 IPSGLPPAVENVIIGCFEY----------DLRNRPLMADI 305
P L +++++ F D+R PL +I
Sbjct: 238 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 99/252 (39%), Gaps = 19/252 (7%)
Query: 36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
+ P P+ IG+G FG V LA H++ + F L K +L KE+ K ++
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLA-RHKAEEVFYAVKVLQKKAILKKKEE--KHIMS 87
Query: 96 KFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRY 154
+ L + + LH K+ + + G G+ QR P Y
Sbjct: 88 ERNVLLKNVKHP-FLVGLHFSFQTADKLYFVLDYING--GELFYHLQRERCFLEPRARFY 144
Query: 155 GIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLG 214
++A + LHS+ +VL DFG L +S + G
Sbjct: 145 AAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG---LCKENIEHNSTTSTFCG 201
Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
TP Y+APE + P D W G + EML G+ P++ ++ E+Y +++ K
Sbjct: 202 TPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK---- 254
Query: 275 CIPSGLPPAVEN 286
P L P + N
Sbjct: 255 --PLQLKPNITN 264
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 130/303 (42%), Gaps = 24/303 (7%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK L KED +
Sbjct: 209 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT------VAVKTL---KEDTME 259
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 319
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 320 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A ++ S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 380 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 430
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGL 325
++ K + P G P V ++ C++++ +RP A+I AFE+ Q + +D L
Sbjct: 431 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 490
Query: 326 GSR 328
G R
Sbjct: 491 GKR 493
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 123/285 (43%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK L KED +
Sbjct: 206 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT------VAVKTL---KEDTME 256
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 257 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 316
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 317 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 376
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A ++ S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 377 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E 427
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 428 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 472
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 10/228 (4%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
IGRG FG+V L H S + +L K + + D A + E F S V
Sbjct: 83 IGRGAFGEVQLVRHKASQKVY--AMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 137
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
L + + + M++ G GD + +P Y ++ + +HS+G
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPG--GDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-R 229
+H L L DFG + + D A+ GTP+Y++PE + +
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV--GTPDYISPEVLKSQGGD 253
Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP 277
G E D W G + EML G P++ S+ Y ++ K C P
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFP 301
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 123/285 (43%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK L KED +
Sbjct: 248 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT------VAVKTL---KEDTME 298
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 299 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 358
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 359 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 418
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A ++ S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 419 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E 469
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 470 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 514
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 131/303 (43%), Gaps = 24/303 (7%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 52
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I ++F G++ D + + ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A ++ S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 173 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 223
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGL 325
++ K + P G P V ++ C++++ +RP A+I AFE+ Q + +D L
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
Query: 326 GSR 328
G R
Sbjct: 284 GKR 286
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 131/304 (43%), Gaps = 24/304 (7%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
++P + ++ T + +KH++G G +G+V+ + + +AVK LKED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 56
Query: 91 KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
+V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
+L Q++ + L E+ + + DFG+ L+ G + +
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
+ ++ P +A ++ S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 177 AKFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTG 324
++ K + P G P V ++ C++++ +RP A+I AFE+ Q + +D
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 287
Query: 325 LGSR 328
LG R
Sbjct: 288 LGKR 291
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
Q V HG N + + ++ + ++R L P+ Y Q+ G LH
Sbjct: 81 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 139
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEP 226
E ++ +GDFG L + D + L GTPNY+APE
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTLCGTPNYIAPEVLSK 195
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
+ SFE D W GC + +L G P+ ++E Y + IKK + IP + P +
Sbjct: 196 KGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAAS 250
Query: 287 VIIGCFEYDLRNRPLMADILH 307
+I + D RP + ++L+
Sbjct: 251 LIQKMLQTDPTARPTINELLN 271
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
Q V HG N + + ++ + ++R L P+ Y Q+ G LH
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 135
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEP 226
E ++ +GDFG L + D + L GTPNY+APE
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
+ SFE D W GC + +L G P+ ++E Y + IKK + IP + P +
Sbjct: 192 KGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAAS 246
Query: 287 VIIGCFEYDLRNRPLMADILH 307
+I + D RP + ++L+
Sbjct: 247 LIQKMLQTDPTARPTINELLN 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 130/303 (42%), Gaps = 24/303 (7%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 52
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A ++ S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 173 KFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 223
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGL 325
++ K + P G P V ++ C++++ +RP A+I AFE+ Q + +D L
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
Query: 326 GSR 328
G R
Sbjct: 284 GKR 286
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
Q V HG N + + ++ + ++R L P+ Y Q+ G LH
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 135
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEP 226
E ++ +GDFG L + D + L GTPNY+APE
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
+ SFE D W GC + +L G P+ ++E Y + IKK + IP + P +
Sbjct: 192 KGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAAS 246
Query: 287 VIIGCFEYDLRNRPLMADILH 307
+I + D RP + ++L+
Sbjct: 247 LIQKMLQTDPTARPTINELLN 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 119/277 (42%), Gaps = 23/277 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
++ T + +KH++G G +G+V++ + + +AVK LKED +V E
Sbjct: 29 MERTDITMKHKLGGGQYGEVYVGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 79
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQL 158
K + ++ L G+ + I ++ G++ D + + ++ +L Q+
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
+ + L E+ + + DFG+ L+ G + + + ++
Sbjct: 140 SSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 199
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +A S ++D W FG + E+ T G+ P+ G + ++Y ++ K +
Sbjct: 200 PESLA--------YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-DLLEKGYRM 250
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
P G PP V ++ C+++ +RP A+ AFE+
Sbjct: 251 EQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFET 287
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 31/300 (10%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
I + LK +G G FG V+LA H + D+ +AVK L E + F + E
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM-LVAVKALKEASESARQDFQREAEL 96
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--------------GK 145
L + Q + G+ + + ++ +R + G G
Sbjct: 97 L--TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L L +L Q+A G+ L + + + +GDFG + R +
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-----MSRDIY 209
Query: 206 DSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
+D R+G M P +W P + + E+D W FG + E+ T G QPW+ S
Sbjct: 210 STDY-YRVGG-RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA--VYND 319
E + +E P PP V ++ GC++ + + R + D+ ++ A VY D
Sbjct: 268 EAIDCITQGRELE-RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLD 326
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 9/200 (4%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
Q V HG N + + ++ + ++R L P+ Y Q+ G LH
Sbjct: 99 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 157
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
E ++ +GDFG L + GTPNY+APE +
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFG---LATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
SFE D W GC + +L G P+ ++E Y + IKK + IP + P ++
Sbjct: 215 GH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAASL 269
Query: 288 IIGCFEYDLRNRPLMADILH 307
I + D RP + ++L+
Sbjct: 270 IQKMLQTDPTARPTINELLN 289
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 9/200 (4%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
Q V HG N + + ++ + ++R L P+ Y Q+ G LH
Sbjct: 75 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 133
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
E ++ +GDFG L + GTPNY+APE +
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFG---LATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
SFE D W GC + +L G P+ ++E Y + IKK + IP + P ++
Sbjct: 191 GH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAASL 245
Query: 288 IIGCFEYDLRNRPLMADILH 307
I + D RP + ++L+
Sbjct: 246 IQKMLQTDPTARPTINELLN 265
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 122/285 (42%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 52
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I ++F G++ D + + ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 173 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 223
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 9/200 (4%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
Q V HG N + + ++ + ++R L P+ Y Q+ G LH
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHR 159
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
E ++ +GDFG L + GTPNY+APE +
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFG---LATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
SFE D W GC + +L G P+ ++E Y + IKK + IP + P ++
Sbjct: 217 GH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAASL 271
Query: 288 IIGCFEYDLRNRPLMADILH 307
I + D RP + ++L+
Sbjct: 272 IQKMLQTDPTARPTINELLN 291
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 123/286 (43%), Gaps = 23/286 (8%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
++P + ++ T + +KH++G G +G+V+ + + +AVK LKED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 56
Query: 91 KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
+V E K + ++ L G+ I ++F G++ D + + ++
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
+L Q++ + L E+ + + DFG+ L+ G + +
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
+ ++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 177 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 31/300 (10%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
I + LK +G G FG V+LA H + D+ +AVK L E + F + E
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM-LVAVKALKEASESARQDFQREAEL 67
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--------------GK 145
L + Q + G+ + + ++ +R + G G
Sbjct: 68 L--TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L L +L Q+A G+ L + + + +GDFG + R +
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-----MSRDIY 180
Query: 206 DSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
+D R+G M P +W P + + E+D W FG + E+ T G QPW+ S
Sbjct: 181 STDY-YRVGGRT-MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA--VYND 319
E + +E P PP V ++ GC++ + + R + D+ ++ A VY D
Sbjct: 239 EAIDCITQGRELE-RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLD 297
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 31/300 (10%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
I + LK +G G FG V+LA H + D+ +AVK L E + F + E
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM-LVAVKALKEASESARQDFQREAEL 73
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG--------------GK 145
L + Q + G+ + + ++ +R + G G
Sbjct: 74 L--TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L L +L Q+A G+ L + + + +GDFG + R +
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-----MSRDIY 186
Query: 206 DSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
+D R+G M P +W P + + E+D W FG + E+ T G QPW+ S
Sbjct: 187 STDY-YRVGGRT-MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNA--VYND 319
E + +E P PP V ++ GC++ + + R + D+ ++ A VY D
Sbjct: 245 EAIDCITQGRELE-RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLD 303
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 23/286 (8%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
++P + ++ T + +KH++G G +G+V+ + + +AVK LKED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 56
Query: 91 KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
+V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
+L Q++ + L E+ + + DFG+ L+ G + +
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
+ ++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 177 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 122/285 (42%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 53
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I ++F G++ D + + ++
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV 113
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 174 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 224
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 225 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 269
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 51/305 (16%)
Query: 40 IDPTS-----LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---------L 85
+DPT LK +G G FG V L + D+ E ++AVK L P L
Sbjct: 1 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADL 58
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGG 144
K++ ++ N + E K++ +C G I + M+F GS+ + + + +
Sbjct: 59 KKE-IEILRNLYHENIVKYK---GICTEDG----GNGIKLIMEFLPSGSLKEYLPKNKN- 109
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
K+ L L+Y +Q+ KG+ L S Q+ +GDFG+ +
Sbjct: 110 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI----- 164
Query: 205 SDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT----------- 250
++D + +P W E ++ +D W FG ++ E+LT
Sbjct: 165 -ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 223
Query: 251 ---GIQPWFGK-SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
I P G+ +V + +++ K PC P P V ++ C+E+ NR +++
Sbjct: 224 FLKMIGPTHGQMTVTRLVNTLKEGKRLPC-PPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
Query: 307 HAFES 311
FE+
Sbjct: 283 EGFEA 287
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 23/286 (8%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
++P + ++ T + +KH++G G +G+V+ + + +AVK L KED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTL---KEDTM 56
Query: 91 KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
+V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
+L Q++ + L E+ + + DFG+ L+ G + +
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
+ ++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 177 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 23/286 (8%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
++P + ++ T + +KH++G G +G+V+ + + +AVK LKED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 56
Query: 91 KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
+V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
+L Q++ + L E+ + + DFG+ L+ G + +
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
+ ++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 177 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 52
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 173 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 223
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 51/305 (16%)
Query: 40 IDPTS-----LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP---------L 85
+DPT LK +G G FG V L + D+ E ++AVK L P L
Sbjct: 13 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADL 70
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGG 144
K++ ++ N + E K++ +C G NG I + M+F GS+ + + + +
Sbjct: 71 KKE-IEILRNLYHENIVKYK---GICTEDGG---NG-IKLIMEFLPSGSLKEYLPKNKN- 121
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
K+ L L+Y +Q+ KG+ L S Q+ +GDFG+ +
Sbjct: 122 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI----- 176
Query: 205 SDSDMALRLGTPNYMAPEQW-EPE--VRGPISFETDTWGFGCSIMEMLT----------- 250
++D + +P W PE ++ +D W FG ++ E+LT
Sbjct: 177 -ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235
Query: 251 ---GIQPWFGK-SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
I P G+ +V + +++ K PC P P V ++ C+E+ NR +++
Sbjct: 236 FLKMIGPTHGQMTVTRLVNTLKEGKRLPC-PPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
Query: 307 HAFES 311
FE+
Sbjct: 295 EGFEA 299
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 24/295 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
++ T + +KH++G G FG+V+ + + +AVK LKED +V E
Sbjct: 8 MERTDITMKHKLGGGQFGEVYEGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 58
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
K + ++ L G+ I +F G++ D + + ++ +L Q+
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
+ + L E+ + + DFG+ L+ G + + + ++
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +A ++ S ++D W FG + E+ T G+ P+ G ++Y ++ K +
Sbjct: 179 PESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRM 229
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGLGSR 328
P G P V ++ C++++ +RP A+I AFE+ Q + +D LG R
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 284
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 56
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 57 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 116
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 117 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 177 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E 227
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 228 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 4 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 54
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 174
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 175 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 225
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 226 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 53
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 113
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 173
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 174 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 224
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 225 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 121/286 (42%), Gaps = 23/286 (8%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED
Sbjct: 1 VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 51
Query: 91 KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
+V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 111
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
+L Q++ + L E+ + + DFG+ L+ G + +
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
+ ++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 172 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY- 222
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 4 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 54
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 175 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E 225
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 226 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 23/285 (8%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED +
Sbjct: 15 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTME 65
Query: 92 VFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD 150
V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 66 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 125
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---S 207
+L Q++ + L E+ + + DFG+ L+ G + + +
Sbjct: 126 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 185
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHS 266
++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 186 KFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE- 236
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 237 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 281
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 126/295 (42%), Gaps = 24/295 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
++ T + +KH++G G +G+V+ + + +AVK LKED +V E
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 58
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
K + ++ L G+ I +F G++ D + + ++ +L Q+
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
+ + L E+ + + DFG+ L+ G + + + ++
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTA 178
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +A ++ S ++D W FG + E+ T G+ P+ G ++Y ++ K +
Sbjct: 179 PESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRM 229
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESS-QNAVYNDGEWTGLGSR 328
P G P V ++ C++++ +RP A+I AFE+ Q + +D LG R
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 284
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 121/286 (42%), Gaps = 23/286 (8%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
+P + ++ T + +KH++G G +G+V+ + + +AVK LKED
Sbjct: 1 VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTM 51
Query: 91 KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLP 149
+V E K + ++ L G+ I +F G++ D + + ++
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 111
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD--- 206
+L Q++ + L E+ + + DFG+ L+ G + +
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 207 SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
+ ++ P +A S ++D W FG + E+ T G+ P+ G + ++Y
Sbjct: 172 AKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY- 222
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ K + P G P V ++ C++++ +RP A+I AFE+
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 118/277 (42%), Gaps = 23/277 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
++ T + +KH++G G +G+V+ + + +AVK LKED +V E
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 62
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
K + ++ L G+ I +F G++ D + + ++ +L Q+
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
+ + L E+ + + DFG+ L+ G + + + ++
Sbjct: 123 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 182
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +A S ++D W FG + E+ T G+ P+ G + ++Y ++ K +
Sbjct: 183 PESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRM 233
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
P G P V ++ C++++ +RP A+I AFE+
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 115/284 (40%), Gaps = 27/284 (9%)
Query: 42 PTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELF 101
P+ L +G+G FG TH ++ + + +K L+ E+ + F+ + + +
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHRETGE------VMVMKELIRFDEETQRTFLKEVKVM- 61
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
+ E +V G+ + ++ ++ +G I + + P + + +A G
Sbjct: 62 -RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLG--------RSLSDSDMALR- 212
++ LHS+ E+ +V+ DFG+ L++ RSL D R
Sbjct: 121 MAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 213 --LGTPNYMAPEQWEPEVRGPISFE-TDTWGFGCSIMEMLTGIQ--PWFGKSVEEIYHSV 267
+G P +MAPE + G E D + FG + E++ + P + + +V
Sbjct: 181 TVVGNPYWMAPEM----INGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV 236
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
++ C P PP+ + + C + D RP + H E+
Sbjct: 237 RGFLDRYC-PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET 279
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
+GDFG+ + D+ GTPNY+APE + SFE D W GC + +L
Sbjct: 183 IGDFGLATKIEFDGERKKDLC---GTPNYIAPEVL---CKKGHSFEVDIWSLGCILYTLL 236
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
G P+ ++E Y + IKK + +P + P +I D RP +A++L
Sbjct: 237 VGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 127/288 (44%), Gaps = 25/288 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
++ T + +KH++G G +G+V+ + + +AVK LKED +V E
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVK---TLKEDTMEVEEFLKEA 58
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQL 158
K + ++ L G+ I ++F G++ D + + ++ +L Q+
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD---SDMALRLGT 215
+ + L E+ + + DFG+ L+ G + + + ++
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +A ++ S ++D W FG + E+ T G+ P+ G ++Y ++ K +
Sbjct: 179 PESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE-LLEKDYRM 229
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES--SQNAVYNDG 320
P G P V ++ C++++ +RP A+I AFE+ ++++ ++G
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEG 277
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 107/275 (38%), Gaps = 47/275 (17%)
Query: 39 WIDPTSLKLK----HR--------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK 86
W P + K+K HR IGRG FG+V + + F A+K+L
Sbjct: 58 WAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVF------AMKIL---- 107
Query: 87 EDCAKVFVNKFEEL----FPKFRESQSVC------W---LHGISVINGKICIAMKFYEGS 133
NK+E L FRE + V W LH + + + M +Y G
Sbjct: 108 --------NKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGG 159
Query: 134 VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDF 193
+ + +LP Y ++ I +H + + + L DF
Sbjct: 160 DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADF 219
Query: 194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLTG 251
G L+ S +A+ GTP+Y++PE + G + E D W G + EML G
Sbjct: 220 GSCLKLMEDGTVQSSVAV--GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
P++ +S+ E Y ++ KE+ P+ + EN
Sbjct: 278 ETPFYAESLVETYGKIMNHKERFQFPTQVTDVSEN 312
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 42 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 93 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 148
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ + S S L G+ +MAPE
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 207
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 267
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 268 KAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
+GDFG+ + D+ GTPNY+APE + SFE D W GC + +L
Sbjct: 167 IGDFGLATKIEFDGERKKDLC---GTPNYIAPEVL---CKKGHSFEVDIWSLGCILYTLL 220
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
G P+ ++E Y + IKK + +P + P +I D RP +A++L
Sbjct: 221 VGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 17/282 (6%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
I+ + + L RIG G FG V+ H ++AVK+L + D F
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKGKWHG---------DVAVKILKVV--DPTPEQFQAFRN 81
Query: 100 LFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
R+++ V L + + + I ++ EGS + + K + ++ Q
Sbjct: 82 EVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT 141
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
A+G+ LH+ E + +GDFG+ + R + G+ +
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQVEQPTGSVLW 200
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKKEKPCIP 277
MAPE + P SF++D + +G + E++TG P+ + ++I V P +
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 278 ---SGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAV 316
P A++ ++ C + RPL IL + E Q+++
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 41 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 91
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 92 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 147
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ + S S L G+ +MAPE
Sbjct: 148 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 206
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 266
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 267 KAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 19 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 70 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 125
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ + S S L G+ +MAPE
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 184
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 244
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 245 KAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 19 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 70 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 125
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ + S S L G+ +MAPE
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 184
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 244
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 245 KAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
K ++G G FGDV L S + +++ + +D ++V + + E +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLE---------RVIKTINKDRSQVPMEQIEAEIEVLKS 76
Query: 107 SQSVCWLHGISVING--KICIAMKFYEG-SVGDRI--AQQRGGKLPLPDILRYGIQLAKG 161
+ V + I M+ EG + +RI AQ RG L + Q+
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 162 ISDLHS---IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
++ HS + H + + DFG+ L SD GT Y
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK----SDEHSTNAAGTALY 192
Query: 219 MAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK---PC 275
MAPE ++ +V +F+ D W G + +LTG P+ G S+EE+ K+ C
Sbjct: 193 MAPEVFKRDV----TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248
Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
P L P +++ D RP A +LH
Sbjct: 249 RP--LTPQAVDLLKQMLTKDPERRPSAAQVLH 278
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 16 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 66
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 67 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 122
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ + S S L G+ +MAPE
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 181
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 241
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 242 KAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 14 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 65 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 120
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ + S S L G+ +MAPE
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 179
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 19 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 65
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 66 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 123
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ E + + DFG + GR+
Sbjct: 124 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW 183
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 184 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 235 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 267
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---ISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
+ GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 XLA------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 14 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 65 NILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 120
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ + S S L G+ +MAPE
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIR 179
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
IG G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G GD + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LXGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
IG G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G GD + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 33 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 79
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 137
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 198 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 249 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 42 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 93 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 148
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ S S L G+ +MAPE
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIR 207
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 267
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 268 KAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 53 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 99
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 157
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 158 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 217
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 218 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 269 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 34 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 84
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 85 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 140
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ S S L G+ +MAPE
Sbjct: 141 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIR 199
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 259
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 260 KAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
+GDFG L + D + L GTPNY+APE + SFE D W GC + +
Sbjct: 183 IGDFG----LATKIEFDGERKKXLCGTPNYIAPEVL---CKKGHSFEVDIWSLGCILYTL 235
Query: 249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
L G P+ ++E Y + IKK + +P + P +I D RP +A++L
Sbjct: 236 LVGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
+GDFG L + D + L GTPNY+APE + SFE D W GC + +
Sbjct: 183 IGDFG----LATKIEFDGERKKTLCGTPNYIAPEVL---CKKGHSFEVDIWSLGCILYTL 235
Query: 249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
L G P+ ++E Y + IKK + +P + P +I D RP +A++L
Sbjct: 236 LVGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 21/269 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 14 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 109 SVCWLHGISVINGKICIAMKFYEGSV---GDRIAQQRGGKLPLPDILRYGIQLAKGISDL 165
++ G S ++ I ++ EGS I + + + L DI R Q A+G+ L
Sbjct: 65 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYL 120
Query: 166 HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
H+ E + +GDFG+ S S L G+ +MAPE
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIR 179
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSV---VIKKEKPCIPSGLP 281
+ + P SF++D + FG + E++TG P+ + ++I V + + + S P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 282 PAVENVIIGCFEYDLRNRPLMADILHAFE 310
A++ ++ C + RPL IL + E
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 27 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 73
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 74 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 131
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 132 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 191
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 192 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 243 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 275
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 44/275 (16%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEY--HELAV-KMLLPLKEDCAK---VFVNKFEELFP 102
+IG G FG L +S +D +Y E+ + +M +E+ + V N
Sbjct: 30 QKIGEGSFGKAILV---KSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 103 KFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
++RES NG + I M + EG + RI Q+G IL + +Q+
Sbjct: 87 QYRESFEE---------NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR--LGTPNYM 219
+ +H + + LGDFGI R L+ + R +GTP Y+
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI-----ARVLNSTVELARACIGTPYYL 192
Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
+PE E + P + ++D W GC + E+ T + S++ + + I
Sbjct: 193 SPEICENK---PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI--------ISGS 241
Query: 280 LPPA-------VENVIIGCFEYDLRNRPLMADILH 307
PP + +++ F+ + R+RP + IL
Sbjct: 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I +M G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 126/305 (41%), Gaps = 38/305 (12%)
Query: 30 VATPTQTRPW------IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL 83
+ T +PW + +LKL R+G G FG+VW+ ++ + ++AVK L
Sbjct: 4 MQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLK 56
Query: 84 --PLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQ 140
+ D N ++L + Q + L+ + V I I ++ E GS+ D +
Sbjct: 57 QGSMSPDAFLAEANLMKQL-----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKT 110
Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLL 200
G KL + +L Q+A+G++ + + + DFG L
Sbjct: 111 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----L 165
Query: 201 GRSLSDSDMALRLGTPNYMAPEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWF 256
R + D++ R G P +W PE G + ++D W FG + E++T G P+
Sbjct: 166 ARLIEDNEYTAREGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 222
Query: 257 GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQ 313
G + E+ ++ + + P P + ++ C++ +RP + +L F ++
Sbjct: 223 GMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 281
Query: 314 NAVYN 318
Y
Sbjct: 282 EGQYQ 286
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 28/272 (10%)
Query: 47 LKHRIGRGPFGDVW--LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFP 102
L +G G FG+V+ + T+H+ E +AVK K+DC KF E +
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKG-----EKINVAVKTC---KKDCTLDNKEKFMSEAVIM 79
Query: 103 KFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
K + + L GI + I M+ Y G +G + + + L + ++ Y +Q+ K
Sbjct: 80 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKA 137
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
++ L SI + + LGDFG L R + D D T P
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPECVKLGDFG-----LSRYIEDEDYYKASVT---RLP 189
Query: 222 EQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP 277
+W PE F T D W F + E+L+ G QP+F +++ V+ K ++ P
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKP 248
Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
PP + ++ C++YD +RP +++ +
Sbjct: 249 DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 22 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 73
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 74 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP---N 217
G++ + + + DFG L R + D++ R G
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAKFPIK 183
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
+ APE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 184 WTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 239
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
P P + ++ C++ +RP + +L F ++ Y
Sbjct: 240 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 284
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 20 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 71
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 72 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP---N 217
G++ + + + DFG L R + D++ R G
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAKFPIK 181
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
+ APE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 182 WTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 237
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
P P + ++ C++ +RP + +L F ++ Y
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 282
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 43/295 (14%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND 319
+V K + PS ++++ LRN L D+ AF + +N V ND
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDL--------LRNL-LQVDLTKAFGNLKNGV-ND 290
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 10 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 61
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 62 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 168
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 169 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 227
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 228 PDNCPEELYQLMRLCWKERPEDRP 251
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 32/285 (11%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 14 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 66 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
P P + ++ C++ +RP + +L F ++ Y
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 276
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 28/272 (10%)
Query: 47 LKHRIGRGPFGDVW--LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFP 102
L +G G FG+V+ + T+H+ E +AVK K+DC KF E +
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKG-----EKINVAVKTC---KKDCTLDNKEKFMSEAVIM 63
Query: 103 KFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
K + + L GI + I M+ Y G +G + + + L + ++ Y +Q+ K
Sbjct: 64 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKA 121
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
++ L SI + + LGDFG L R + D D T P
Sbjct: 122 MAYLESINCVHRDIAVRNILVASPECVKLGDFG-----LSRYIEDEDYYKASVT---RLP 173
Query: 222 EQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP 277
+W PE F T D W F + E+L+ G QP+F +++ V+ K ++ P
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKP 232
Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
PP + ++ C++YD +RP +++ +
Sbjct: 233 DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 28/272 (10%)
Query: 47 LKHRIGRGPFGDVW--LATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF--EELFP 102
L +G G FG+V+ + T+H+ E +AVK K+DC KF E +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKG-----EKINVAVK---TCKKDCTLDNKEKFMSEAVIM 67
Query: 103 KFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
K + + L GI + I M+ Y G +G + + + L + ++ Y +Q+ K
Sbjct: 68 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKA 125
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
++ L SI + + LGDFG L R + D D T P
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFG-----LSRYIEDEDYYKASVT---RLP 177
Query: 222 EQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIP 277
+W PE F T D W F + E+L+ G QP+F +++ V+ K ++ P
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKP 236
Query: 278 SGLPPAVENVIIGCFEYDLRNRPLMADILHAF 309
PP + ++ C++YD +RP +++ +
Sbjct: 237 DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + F A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHF------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
IG G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + F A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHF------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + F A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHF------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 15/266 (5%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 18 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 68
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
++ G S ++ I ++ EGS K + ++ Q A+G+ LH+
Sbjct: 69 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
E + + +GDFG+ + S S L G+ +MAPE +
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS-GSILWMAPEVIRMQD 186
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFG----KSVEEIYHSVVIKKEKPCIPSGLPPAV 284
P SF++D + FG + E++TG P+ + E+ + + + S P +
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 246
Query: 285 ENVIIGCFEYDLRNRPLMADILHAFE 310
+ ++ C + RP IL E
Sbjct: 247 KRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
YG ++ + LHS + + + DFG L +SD + M
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTF 168
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
GTP Y+APE E G D WG G + EM+ G P++ + E ++ +++ E
Sbjct: 169 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 223
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
+ P L P ++++ G + D + R
Sbjct: 224 EIRFPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 14 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 66 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRP 255
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 15 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 66
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 67 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAK---F 173
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 232
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 233 PDNCPEELYQLMRLCWKERPEDRP 256
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 14 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 66 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRP 255
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 53 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 99
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 157
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + G +
Sbjct: 158 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW 217
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
+ GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 218 T------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 269 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 16 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 67
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 68 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAK---F 174
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 233
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 234 PDNCPEELYQLMRLCWKERPEDRP 257
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
YG ++ + LHS + + + DFG L +SD + M
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
GTP Y+APE E G D WG G + EM+ G P++ + E ++ +++ E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
+ P L P ++++ G + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
YG ++ + LHS + + + DFG L +SD + M
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
GTP Y+APE E G D WG G + EM+ G P++ + E ++ +++ E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
+ P L P ++++ G + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
YG ++ + LHS + + + DFG L +SD + M
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
GTP Y+APE E G D WG G + EM+ G P++ + E ++ +++ E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
+ P L P ++++ G + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
YG ++ + LHS + + + DFG L +SD + M
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
GTP Y+APE E G D WG G + EM+ G P++ + E ++ +++ E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
+ P L P ++++ G + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
YG ++ + LHS + + + DFG L +SD + M
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTF 165
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
GTP Y+APE E G D WG G + EM+ G P++ + E ++ +++ E
Sbjct: 166 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 220
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
+ P L P ++++ G + D + R
Sbjct: 221 EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 9 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 60
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 61 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 167
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 226
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 227 PDNCPEELYQLMRLCWKERPEDRP 250
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 20 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 71
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 72 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 178
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 237
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRP 261
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 19 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 70
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 71 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAK---F 177
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 236
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 237 PDNCPEELYQLMRLCWKERPEDRP 260
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 118 VINGKICIAMKFYEG-SVGDRI------AQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
V+ ++ + MK G SV D I + + G L I ++ +G+ LH G
Sbjct: 83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGI-PYLLLGRSLSDSDM-ALRLGTPNYMAPEQWEPEV 228
E + + DFG+ +L G ++ + + +GTP +MAPE E +V
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME-QV 201
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP------- 281
RG F+ D W FG + +E+ TG P+ ++ + ++ + P + +G+
Sbjct: 202 RG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKK 259
Query: 282 --PAVENVIIGCFEYDLRNRPLMADILHA--FESSQNAVY 317
+ +I C + D RP A++L F+ ++N +
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 118 VINGKICIAMKFYEG-SVGDRI------AQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
V+ ++ + MK G SV D I + + G L I ++ +G+ LH G
Sbjct: 78 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 137
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGI-PYLLLGRSLSDSDM-ALRLGTPNYMAPEQWEPEV 228
E + + DFG+ +L G ++ + + +GTP +MAPE E +V
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME-QV 196
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLP------- 281
RG F+ D W FG + +E+ TG P+ ++ + ++ + P + +G+
Sbjct: 197 RG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKK 254
Query: 282 --PAVENVIIGCFEYDLRNRPLMADIL-HAF 309
+ +I C + D RP A++L H F
Sbjct: 255 YGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD-SDMALR 212
YG ++ + LHS + + + DFG L +SD + M
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXF 170
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
GTP Y+APE E G D WG G + EM+ G P++ + E ++ +++ E
Sbjct: 171 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E 225
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNR 299
+ P L P ++++ G + D + R
Sbjct: 226 EIRFPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 29/264 (10%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G FG+VW+ ++ + ++AVK L + D N ++L
Sbjct: 23 TLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 74
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 75 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP---N 217
G++ + + + DFG L R + D++ R G
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGAKFPIK 184
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
+ APE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 185 WTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 240
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP 300
P P + ++ C++ +RP
Sbjct: 241 PDNCPEELYQLMRLCWKERPEDRP 264
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+AP + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEYLAPAII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ + GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
L + DFG L G + GT YMAPE + RG D W GC+I+E
Sbjct: 162 LKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIE 217
Query: 248 MLTGIQPWF--GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
M TG P++ G+ ++ V + K P IP + + I+ CFE D R D+
Sbjct: 218 MATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDL 276
Query: 306 L 306
L
Sbjct: 277 L 277
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 21/241 (8%)
Query: 33 PTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML----LPLKED 88
P+ + T +G+G FG V LA + + + A+K+L + +D
Sbjct: 9 PSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELY------AIKILKKDVVIQDDD 62
Query: 89 CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLP 147
V K + + + LH ++ M++ G GD + Q+ GK
Sbjct: 63 VECTMVEK--RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNG--GDLMYHIQQVGKFK 118
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
P + Y +++ G+ LH G + + DFG+ + ++
Sbjct: 119 EPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR 178
Query: 208 DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
+ GTP+Y+APE + P D W +G + EML G P+ G+ +E++ S+
Sbjct: 179 EFC---GTPDYIAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 232
Query: 268 V 268
+
Sbjct: 233 M 233
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 70 LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 118
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 176
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 230
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 231 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 285
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 286 LKDLLRNLLQVDLTKR 301
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 35 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 83
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 141
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ + GTP Y+APE
Sbjct: 142 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEI 195
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 196 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 250
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 251 LKDLLRNLLQVDLTKR 266
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
L + DFG L G + GT YMAPE + RG D W GC+I+E
Sbjct: 148 LKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIE 203
Query: 248 MLTGIQPWF--GKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
M TG P++ G+ ++ V + K P IP + + I+ CFE D R D+
Sbjct: 204 MATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDL 262
Query: 306 L 306
L
Sbjct: 263 L 263
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
+P Q +D + +G G FG V L H ++ + + A+K+L D K
Sbjct: 33 SPAQNTAHLD--QFERIRTLGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQK 79
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + +++ G G+ + +R G
Sbjct: 80 VVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPG--GEMFSHLRRIG 137
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 197
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP Y+APE + + D W G I EM G P+F +IY
Sbjct: 198 X------LCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 249 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
DFGI + S + A +GT Y++PEQ RG + +D + GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----PL 301
G P+ G S + + + V +E P PS GL ++ V++ + NR +
Sbjct: 215 GEPPFTGDSPDSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 302 MADI--LHAFESSQN-AVYNDGEWTGLGSRA 329
AD+ +H E + V D E T L S A
Sbjct: 273 RADLVRVHNGEPPEAPKVLTDAERTSLLSSA 303
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKEIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG+ + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKEIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG+ + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 90
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 148
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 202
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 203 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 257
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 258 LKDLLRNLLQVDLTKR 273
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 37/251 (14%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL----FPKFRE 106
IGRG FG+V + + + A+K+L NK+E L FRE
Sbjct: 98 IGRGAFGEVAVVKMKNTERIY------AMKIL------------NKWEMLKRAETACFRE 139
Query: 107 SQSVC------W---LHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI- 156
+ V W LH + + M +Y G + + KLP D+ R+ I
Sbjct: 140 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIG 198
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
++ I +H + + + L DFG + S +A+ GTP
Sbjct: 199 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV--GTP 256
Query: 217 NYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+Y++PE Q + G E D W G + EML G P++ +S+ E Y ++ +E+
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 316
Query: 275 CIPSGLPPAVE 285
PS + E
Sbjct: 317 QFPSHVTDVSE 327
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
I ++ LK +G G FG V+LA + + D+ +AVK L ++ K F ++ E
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKI-LVAVKTLKDASDNARKDF-HREAE 67
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAM---------KFYEGSVGDRIAQQRGG---KLP 147
L + + + +G+ V + + KF D + G +L
Sbjct: 68 LLTNL-QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
+L Q+A G+ L S E+ + +GDFG + R + +
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG-----MSRDVYST 181
Query: 208 DMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
D R+G + M P +W P + + E+D W G + E+ T G QPW+ S E+
Sbjct: 182 DY-YRVGG-HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
Query: 264 YHSV----VIKKEKPCIPSGLPPAVENVIIGCFE 293
+ V+++ + C P V +++GC++
Sbjct: 240 IECITQGRVLQRPRTC-----PQEVYELMLGCWQ 268
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 37/251 (14%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL----FPKFRE 106
IGRG FG+V + + + A+K+L NK+E L FRE
Sbjct: 82 IGRGAFGEVAVVKMKNTERIY------AMKIL------------NKWEMLKRAETACFRE 123
Query: 107 SQSVC------W---LHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI- 156
+ V W LH + + M +Y G + + KLP D+ R+ I
Sbjct: 124 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIG 182
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
++ I +H + + + L DFG + S +A+ GTP
Sbjct: 183 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV--GTP 240
Query: 217 NYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+Y++PE Q + G E D W G + EML G P++ +S+ E Y ++ +E+
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 300
Query: 275 CIPSGLPPAVE 285
PS + E
Sbjct: 301 QFPSHVTDVSE 311
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 15/266 (5%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 30 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
++ G S ++ I ++ EGS K + ++ Q A+G+ LH+
Sbjct: 81 NILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
E + + +GDFG+ S S L G+ +MAPE +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIRMQD 198
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFG----KSVEEIYHSVVIKKEKPCIPSGLPPAV 284
P SF++D + FG + E++TG P+ + E+ + + + S P +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 285 ENVIIGCFEYDLRNRPLMADILHAFE 310
+ ++ C + RP IL E
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 41/296 (13%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
I + LK +G G FG V+LA + + D+ +AVK L K F + E
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKM-LVAVKALKDPTLAARKDF-QREAE 69
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG---------------G 144
L + + + +G+ + + ++ + ++ + G G
Sbjct: 70 LLTNL-QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+L L +L Q+A G+ L S + + +GDFG + R +
Sbjct: 129 ELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG-----MSRDV 183
Query: 205 SDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
+D R+G + M P +W P + + E+D W FG + E+ T G QPWF S
Sbjct: 184 YSTDY-YRVGG-HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
Query: 261 EEIYHSV----VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD---ILHAF 309
E+ + V+++ + C P V +V++GC++ + + R + + ILHA
Sbjct: 242 TEVIECITQGRVLERPRVC-----PKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 116/288 (40%), Gaps = 35/288 (12%)
Query: 31 ATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC 89
A + TR + I ++L IG G FGDV HQ E LAV + ++C
Sbjct: 2 AMGSSTRDYEIQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNC 54
Query: 90 AKVFV-NKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKL 146
V KF E L + + + L G+ + + I M+ Q R L
Sbjct: 55 TSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSL 113
Query: 147 PLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD 206
L ++ Y QL+ ++ L S +D + LGDFG L R + D
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMED 168
Query: 207 SDM--ALRLGTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFG 257
S A + P +MAPE I+F +D W FG + E+L G++P+ G
Sbjct: 169 STYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
Query: 258 KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++ + + P +P PP + +++ C+ YD RP ++
Sbjct: 221 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 90
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 148
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 202
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 203 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 257
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 258 LKDLLRNLLQVDLTKR 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 33/275 (12%)
Query: 32 TPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAK 91
TP+Q +D ++K +G G FG V L H +S + + A+K+L D K
Sbjct: 32 TPSQNTAQLDQFD-RIK-TLGTGSFGRVMLVKHKESGNHY------AMKIL-----DKQK 78
Query: 92 VF-VNKFEELFPKFRESQSVCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGG 144
V + + E + R Q+V + + + N + + M++ G G+ + +R G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIG 136
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ P Y Q+ LHS+ + + + DFG + GR+
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 205 SDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIY 264
GTP +APE + + D W G I EM G P+F +IY
Sbjct: 197 X------LCGTPEALAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
+V K + PS +++++ + DL R
Sbjct: 248 EKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 15/266 (5%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
RIG G FG V+ H ++AVKML ++ K E +
Sbjct: 30 QRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
++ G S ++ I ++ EGS K + ++ Q A+G+ LH+
Sbjct: 81 NILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
E + + +GDFG+ S S L G+ +MAPE +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS-GSILWMAPEVIRMQD 198
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFG----KSVEEIYHSVVIKKEKPCIPSGLPPAV 284
P SF++D + FG + E++TG P+ + E+ + + + S P +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 285 ENVIIGCFEYDLRNRPLMADILHAFE 310
+ ++ C + RP IL E
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 116/288 (40%), Gaps = 35/288 (12%)
Query: 31 ATPTQTRPW-IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC 89
A + TR + I ++L IG G FGDV HQ E LAV + ++C
Sbjct: 25 AMGSSTRDYEIQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNC 77
Query: 90 AKVFV-NKF--EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKL 146
V KF E L + + + L G+ + + I M+ Q R L
Sbjct: 78 TSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSL 136
Query: 147 PLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSD 206
L ++ Y QL+ ++ L S +D + LGDFG L R + D
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMED 191
Query: 207 SDM--ALRLGTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFG 257
S A + P +MAPE I+F +D W FG + E+L G++P+ G
Sbjct: 192 STYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
Query: 258 KSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++ + + P +P PP + +++ C+ YD RP ++
Sbjct: 244 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 97
Query: 110 VCWLHGISV-----INGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + + + N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 209
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 210 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
I ++L IG G FGDV HQ E LAV + ++C V KF
Sbjct: 10 IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNCTSDSVREKFL 62
Query: 98 -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E L + + + L G+ + + I M+ Q R L L ++ Y
Sbjct: 63 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
QL+ ++ L S +D + LGDFG L R + DS A +
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 176
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
P +MAPE I+F +D W FG + E+L G++P+ G ++ +
Sbjct: 177 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ P +P PP + +++ C+ YD RP ++
Sbjct: 229 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 117/302 (38%), Gaps = 32/302 (10%)
Query: 9 KPAASFEYELFEGDP------DHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLA 62
K A+ E + G P + + +A P + LKL +G+G FG V L
Sbjct: 111 KKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKL---LGKGTFGKVILV 167
Query: 63 THHQSADDFDEYHELAV--KMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVIN 120
+ Y+ + + K ++ K++ A + R + +
Sbjct: 168 KEKATG----RYYAMKILKKEVIVAKDEVAHTLTEN--RVLQNSRHPFLTALKYSFQT-H 220
Query: 121 GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXXX 179
++C M++ G G+ ++ D R YG ++ + LHS
Sbjct: 221 DRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 278
Query: 180 XXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFETD 237
+ D + + DFG L + D + M GTP Y+APE E G D
Sbjct: 279 NLMLDKDGHIKITDFG----LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA---VD 331
Query: 238 TWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLR 297
WG G + EM+ G P++ + E+++ +++ E+ P L P ++++ G + D +
Sbjct: 332 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDPK 389
Query: 298 NR 299
R
Sbjct: 390 QR 391
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
I ++L IG G FGDV HQ E LAV + ++C V KF
Sbjct: 9 IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNCTSDSVREKFL 61
Query: 98 -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E L + + + L G+ + + I M+ Q R L L ++ Y
Sbjct: 62 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
QL+ ++ L S +D + LGDFG L R + DS A +
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 175
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
P +MAPE I+F +D W FG + E+L G++P+ G ++ +
Sbjct: 176 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ P +P PP + +++ C+ YD RP ++
Sbjct: 228 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXX 178
+ ++C M++ G G+ ++ D R YG ++ + LHS
Sbjct: 223 HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 280
Query: 179 XXXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFET 236
+ D + + DFG L + D + M GTP Y+APE E G
Sbjct: 281 ENLMLDKDGHIKITDFG----LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA---V 333
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDL 296
D WG G + EM+ G P++ + E+++ +++ E+ P L P ++++ G + D
Sbjct: 334 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDP 391
Query: 297 RNR 299
+ R
Sbjct: 392 KQR 394
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCW-----LHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + L N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCW-----LHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + L N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 10/229 (4%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
IGRG FG+V L H + + +L K + + D A + E F S V
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVY--AMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 131
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
L + + + M++ G GD + +P Y ++ + +HS+G
Sbjct: 132 VQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 189
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-R 229
+ L L DFG + + D A+ GTP+Y++PE + +
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKSQGGD 247
Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
G E D W G + EML G P++ S+ Y ++ K P
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
I ++L IG G FGDV HQ E LAV + ++C V KF
Sbjct: 7 IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNCTSDSVREKFL 59
Query: 98 -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E L + + + L G+ + + I M+ Q R L L ++ Y
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
QL+ ++ L S +D + LGDFG L R + DS A +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 173
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
P +MAPE I+F +D W FG + E+L G++P+ G ++ +
Sbjct: 174 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ P +P PP + +++ C+ YD RP ++
Sbjct: 226 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 31/256 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF-VNKFEELFPKFRESQS 109
+G G FG V L H ++ + + A+K+L D KV + + E + R Q+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHY------AMKIL-----DKQKVVKLKQIEHTLNEKRILQA 98
Query: 110 VCW-----LHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGIS 163
V + L N + + M++ G G+ + +R G+ P Y Q+
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
LHS+ + + + DFG + GR+ GTP Y+APE
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEI 210
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ + D W G I EM G P+F +IY +V K + PS
Sbjct: 211 I---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 265
Query: 284 VENVIIGCFEYDLRNR 299
+++++ + DL R
Sbjct: 266 LKDLLRNLLQVDLTKR 281
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ D + Q RG P +L +G+Q+AKG+ L G Q+ +
Sbjct: 99 GSLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVA 157
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEM 248
DFG+ L L D L P +W E G + ++D W +G ++ E+
Sbjct: 158 DFGVADL-----LPPDDKQLLYSEAK--TPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 210
Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
+T G +P+ G + E+ ++ K E+ P V V++ C+ D RP ++ +
Sbjct: 211 MTFGAEPYAGLRLAEV-PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN 269
Query: 308 AF 309
F
Sbjct: 270 EF 271
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 10/229 (4%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
IGRG FG+V L H + + +L K + + D A + E F S V
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVY--AMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 136
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
L + + + M++ G GD + +P Y ++ + +HS+G
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-R 229
+ L L DFG + + D A+ GTP+Y++PE + +
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKSQGGD 252
Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPS 278
G E D W G + EML G P++ S+ Y ++ K P
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 301
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
I ++L IG G FGDV HQ E LAV + ++C V KF
Sbjct: 4 IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPALAVA--IKTCKNCTSDSVREKFL 56
Query: 98 -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E L + + + L G+ + + I M+ Q R L L ++ Y
Sbjct: 57 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 115
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
QL+ ++ L S +D + LGDFG L R + DS A +
Sbjct: 116 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 170
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
P +MAPE I+F +D W FG + E+L G++P+ G ++ +
Sbjct: 171 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ P +P PP + +++ C+ YD RP ++
Sbjct: 223 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXX 178
+ ++C M++ G G+ ++ D R YG ++ + LHS
Sbjct: 80 HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 137
Query: 179 XXXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFET 236
+ D + + DFG L + D + M GTP Y+APE E G
Sbjct: 138 ENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA---V 190
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDL 296
D WG G + EM+ G P++ + E+++ +++ E+ P L P ++++ G + D
Sbjct: 191 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDP 248
Query: 297 RNR 299
+ R
Sbjct: 249 KQR 251
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 12/243 (4%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
IGRG FG+V L H + + +L K + + D A + E F S V
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVY--AMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWV 136
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGX 170
L + + + M++ G GD + +P Y ++ + +HS+G
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 194
Query: 171 XXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV-R 229
+ L L DFG + + D A+ GTP+Y++PE + +
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--GTPDYISPEVLKSQGGD 252
Query: 230 GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIP--SGLPPAVENV 287
G E D W G + EML G P++ S+ Y ++ K P + + +N+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 288 IIG 290
I
Sbjct: 313 ICA 315
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXX 178
+ ++C M++ G G+ ++ D R YG ++ + LHS
Sbjct: 81 HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 138
Query: 179 XXXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFET 236
+ D + + DFG L + D + M GTP Y+APE E G
Sbjct: 139 ENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA---V 191
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDL 296
D WG G + EM+ G P++ + E+++ +++ E+ P L P ++++ G + D
Sbjct: 192 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDP 249
Query: 297 RNR 299
+ R
Sbjct: 250 KQR 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 120 NGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHSIGXXXXXXXXX 178
+ ++C M++ G G+ ++ D R YG ++ + LHS
Sbjct: 82 HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 139
Query: 179 XXXXXEHD-QLVLGDFGIPYLLLGRSLSD-SDMALRLGTPNYMAPEQWEPEVRGPISFET 236
+ D + + DFG L + D + M GTP Y+APE E G
Sbjct: 140 ENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA---V 192
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDL 296
D WG G + EM+ G P++ + E+++ +++ E+ P L P ++++ G + D
Sbjct: 193 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLGPEAKSLLSGLLKKDP 250
Query: 297 RNR 299
+ R
Sbjct: 251 KQR 253
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 26/253 (10%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAV--KMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+G+G FG V L+ + DE + + + K ++ +D V K P +
Sbjct: 349 LGKGSFGKVMLSERKGT----DELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPP 402
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHS 167
+ LH ++ M++ G GD + Q+ G+ P + Y ++A G+ L S
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
G + + DFG+ + ++ GTP+Y+APE +
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC---GTPDYIAPEIIAYQ 517
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV---------IKKEKPCIPS 278
P D W FG + EML G P+ G+ +E++ S++ + KE I
Sbjct: 518 ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 574
Query: 279 GLPPAVENVIIGC 291
GL +GC
Sbjct: 575 GLMTKHPGKRLGC 587
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 26/268 (9%)
Query: 36 TRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV--KMLLPLKEDCAKVF 93
R + T +G+G FG V L+ + DE + + + K ++ +D
Sbjct: 13 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGT----DELYAVKILKKDVVIQDDDVECTM 68
Query: 94 VNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDIL 152
V K P + + LH ++ M++ G GD + Q+ G+ P +
Sbjct: 69 VEKRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGRFKEPHAV 124
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
Y ++A G+ L S G + + DFG+ + ++
Sbjct: 125 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-- 182
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV---- 268
GTP+Y+APE + P D W FG + EML G P+ G+ +E++ S++
Sbjct: 183 -GTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 238
Query: 269 -----IKKEKPCIPSGLPPAVENVIIGC 291
+ KE I GL +GC
Sbjct: 239 AYPKSMSKEAVAICKGLMTKHPGKRLGC 266
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 44 SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL--PLKEDCAKVFVNKFEELF 101
+LKL R+G G G+VW+ ++ + ++AVK L + D N ++L
Sbjct: 14 TLKLVERLGAGQAGEVWMGY-------YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAK 160
+ Q + L+ + V I I ++ E GS+ D + G KL + +L Q+A+
Sbjct: 66 ----QHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 161 GISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMA 220
G++ + + + DFG L R + D++ R G
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDAEXTAREGAK---F 172
Query: 221 PEQWE-PEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE G + ++D W FG + E++T G P+ G + E+ ++ + +
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRP---LMADILHAFESSQNAVYN 318
P P + ++ C++ +RP + +L F ++ Y
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 276
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
GS+ D + Q RG P +L +G+Q+AKG+ L G Q+ +
Sbjct: 117 GSLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVA 175
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEM 248
DFG+ L L D L P +W E G + ++D W +G ++ E+
Sbjct: 176 DFGVADL-----LPPDDKQLLYSEAK--TPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 228
Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
+T G +P+ G + E+ ++ K E+ P V V++ C+ D RP ++ +
Sbjct: 229 MTFGAEPYAGLRLAEV-PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN 287
Query: 308 AF 309
F
Sbjct: 288 EF 289
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
DFGI + S + A +GT Y++PEQ RG + +D + GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----PL 301
G P+ G S + + V +E P PS GL ++ V++ + NR +
Sbjct: 215 GEPPFTGDSPVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 302 MADI--LHAFESSQN-AVYNDGEWTGLGSRALTDTS 334
AD+ +H E + V D E T L S A + S
Sbjct: 273 RADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
DFGI + S + A +GT Y++PEQ RG + +D + GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKS-VEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----P 300
G P+ G S V Y V +E P PS GL ++ V++ + NR
Sbjct: 215 GEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
Query: 301 LMADI--LHAFESSQN-AVYNDGEWTGLGSRALTDTS 334
+ AD+ +H E + V D E T L S A + S
Sbjct: 272 MRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
DFGI + S + A +GT Y++PEQ RG + +D + GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----PL 301
G P+ G S + + V +E P PS GL ++ V++ + NR +
Sbjct: 215 GEPPFTGDSPVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 302 MADI--LHAFESSQN-AVYNDGEWTGLGSRALTDTS 334
AD+ +H E + V D E T L S A + S
Sbjct: 273 RADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 104/282 (36%), Gaps = 52/282 (18%)
Query: 39 WIDPTSLKLKHR------------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK 86
W +P ++LK IGRG F +V + Q+ + A+K++
Sbjct: 45 WAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVY------AMKIM---- 94
Query: 87 EDCAKVFVNKFEEL----FPKFRESQSVC------W---LHGISVINGKICIAMKFYEGS 133
NK++ L FRE + V W LH + + M++Y G
Sbjct: 95 --------NKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGG 146
Query: 134 VGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDF 193
+ + G ++P Y ++ I +H +G + L DF
Sbjct: 147 DLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADF 206
Query: 194 GIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF----ETDTWGFGCSIMEML 249
G L S +A+ GTP+Y++PE + GP + E D W G EM
Sbjct: 207 GSCLKLRADGTVRSLVAV--GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF 264
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEK---PCIPSGLPPAVENVI 288
G P++ S E Y +V KE P + G+P + I
Sbjct: 265 YGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
I ++L IG G FGDV HQ E +AV + ++C V KF
Sbjct: 7 IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPAMAVA--IKTCKNCTSDSVREKFL 59
Query: 98 -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E L + + + L G+ + + I M+ Q R L L ++ Y
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
QL+ ++ L S +D + LGDFG L R + DS A +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGK 173
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
P +MAPE I+F +D W FG + E+L G++P+ G ++ +
Sbjct: 174 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ P +P PP + +++ C+ YD RP ++
Sbjct: 226 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
I ++L IG G FGDV HQ E +AV + ++C V KF
Sbjct: 7 IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPAMAVA--IKTCKNCTSDSVREKFL 59
Query: 98 -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E L + + + L G+ + + I M+ Q R L L ++ Y
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
QL+ ++ L S +D + LGDFG L R + DS A +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----LSRYMEDSTXXKASKGK 173
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
P +MAPE I+F +D W FG + E+L G++P+ G ++ +
Sbjct: 174 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ P +P PP + +++ C+ YD RP ++
Sbjct: 226 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 122/312 (39%), Gaps = 20/312 (6%)
Query: 8 HKPAASFEYELFEGDPDHLRTVVATPTQ---TRPWIDP-TSLKLKHRIGRGPFGDVWLAT 63
KP +++ E + T + PTQ W P +L+ +G G FG V AT
Sbjct: 8 QKPKYQVRWKIIESYEGNSYTFI-DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 64 HHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG-------I 116
+ D ++AVKML K + ++ + +++ L G +
Sbjct: 67 AFGLGKE-DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125
Query: 117 SVINGKICIA--MKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXX 174
VI C + F + ++ G L L D+L + Q+A+G++ L S
Sbjct: 126 LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRD 185
Query: 175 XXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF 234
+GDFG+ ++ S RL +MAPE V +
Sbjct: 186 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDCV---YTV 241
Query: 235 ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
++D W +G + E+ + G+ P+ G V ++ +V + P+ P + +++ C+
Sbjct: 242 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA 301
Query: 294 YDLRNRPLMADI 305
+ +RP I
Sbjct: 302 LEPTHRPTFQQI 313
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 122/311 (39%), Gaps = 20/311 (6%)
Query: 9 KPAASFEYELFEGDPDHLRTVVATPTQ---TRPWIDP-TSLKLKHRIGRGPFGDVWLATH 64
KP +++ E + T + PTQ W P +L+ +G G FG V AT
Sbjct: 1 KPKYQVRWKIIESYEGNSYTFI-DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATA 59
Query: 65 HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHG-------IS 117
+ D ++AVKML K + ++ + +++ L G +
Sbjct: 60 FGLGKE-DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 118
Query: 118 VINGKICIA--MKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXX 175
VI C + F + ++ G L L D+L + Q+A+G++ L S
Sbjct: 119 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 178
Query: 176 XXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFE 235
+GDFG+ ++ S RL +MAPE V + +
Sbjct: 179 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDCV---YTVQ 234
Query: 236 TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
+D W +G + E+ + G+ P+ G V ++ +V + P+ P + +++ C+
Sbjct: 235 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 294
Query: 295 DLRNRPLMADI 305
+ +RP I
Sbjct: 295 EPTHRPTFQQI 305
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
DFGI + S A +GT Y++PEQ RG + +D + GC + E+LT
Sbjct: 159 DFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 214
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR-----PL 301
G P+ G S + + V +E P PS GL ++ V++ + NR +
Sbjct: 215 GEPPFTGDSPVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
Query: 302 MADI--LHAFESSQN-AVYNDGEWTGLGSRALTDTS 334
AD+ +H E + V D E T L S A + S
Sbjct: 273 RADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLS 308
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRG-PISFETDTWGFGCSIMEMLT 250
DFGI + S + A +GT Y++PEQ RG + +D + GC + E+LT
Sbjct: 176 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLT 231
Query: 251 GIQPWFGKS-VEEIYHSVVIKKEKPCIPS----GLPPAVENVIIGCFEYDLRNR 299
G P+ G S V Y V +E P PS GL ++ V++ + NR
Sbjct: 232 GEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 18/210 (8%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
+IG G G V +AT + ++AVK + K+ ++ N E + + +
Sbjct: 52 KIGEGSTGIVCIATEKHTGK------QVAVKKMDLRKQQRRELLFN--EVVIMRDYHHDN 103
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
V ++ ++ ++ + M+F EG ++ D + R + I + + + +S LH+
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQ 160
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
G ++ L DFG + S +GTP +MAPE
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV---SKEVPKRKXLVGTPYWMAPEVIS--- 214
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
R P E D W G ++EM+ G P+F +
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 149 PDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
PD + Q+A G+ L S + + + D G L R + +D
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG-----LFREVYAAD 182
Query: 209 MALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
LG N + P +W E + G S ++D W +G + E+ + G+QP+ G S +++
Sbjct: 183 YYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 240
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ ++ PC P P V ++I C+ RP DI
Sbjct: 241 EMIRNRQVLPC-PDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 140 QQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLL 199
Q R L L ++ Y QL+ ++ L S +D + LGDFG
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG----- 536
Query: 200 LGRSLSDSDM--ALRLGTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT- 250
L R + DS A + P +MAPE I+F +D W FG + E+L
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMH 588
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
G++P+ G ++ + + P +P PP + +++ C+ YD RP ++
Sbjct: 589 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 116/288 (40%), Gaps = 43/288 (14%)
Query: 43 TSLKLKHRIGRGPFGDVWLA--------THHQSADDFDEYHELAVKMLLPLKEDCAKVFV 94
+ +++ +IGRG F +V+ A + FD A + DC K +
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA-------RADCIKE-I 83
Query: 95 NKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPD--I 151
+ ++L +V + + + ++ I ++ + G + I + K +P+ +
Sbjct: 84 DLLKQL-----NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV 138
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+Y +QL + +HS + LGD G LGR S A
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG-----LGRFFSSKTTAA 193
Query: 212 R--LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVI 269
+GTP YM+PE+ +F++D W GC + EM P++G + +S+
Sbjct: 194 HSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCK 248
Query: 270 KKEK---PCIPSG-LPPAVENVIIGCFEYDLRNRPLMADILHAFESSQ 313
K E+ P +PS + ++ C D RP D+ + ++ ++
Sbjct: 249 KIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP---DVTYVYDVAK 293
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 110/278 (39%), Gaps = 34/278 (12%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFV-NKF- 97
I ++L IG G FGDV HQ E +AV + ++C V KF
Sbjct: 7 IQRERIELGRCIGEGQFGDV-----HQGIYMSPENPAMAVA--IKTCKNCTSDSVREKFL 59
Query: 98 -EELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E L + + + L G+ + + I M+ Q R L L ++ Y
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM--ALRLG 214
QL+ ++ L S D + LGDFG L R + DS A +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG-----LSRYMEDSTYYKASKGK 173
Query: 215 TP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSV 267
P +MAPE I+F +D W FG + E+L G++P+ G ++ +
Sbjct: 174 LPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 268 VIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ P +P PP + +++ C+ YD RP ++
Sbjct: 226 ENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 60
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 118
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 177
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 178 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH 166
S V L GI + + + G + D + + RG +L D+L + +Q+AKG+S L
Sbjct: 78 SPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRG-RLGSQDLLNWCMQIAKGMSYLE 136
Query: 167 SIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW-- 224
+ + + + DFG+ LL + +++ G P +W
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLL---DIDETEYHADGGK----VPIKWMA 189
Query: 225 -EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPP 282
E +R + ++D W +G ++ E++T G +P+ G EI ++ K E+ P
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-PDLLEKGERLPQPPICTI 248
Query: 283 AVENVIIGCFEYDLRNRPLMADILHAF 309
V +++ C+ D RP +++ F
Sbjct: 249 DVYMIMVKCWMIDSECRPRFRELVSEF 275
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEIXINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEIXINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 149 PDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
PD + Q+A G+ L S + + + D G L R + +D
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG-----LFREVYAAD 199
Query: 209 MALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
LG N + P +W E + G S ++D W +G + E+ + G+QP+ G S +++
Sbjct: 200 YYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 257
Query: 265 HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ ++ PC P P V ++I C+ RP DI
Sbjct: 258 EMIRNRQVLPC-PDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEIXINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 62
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMCGTLPYVAPELL 179
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 180 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFEELFPKFR 105
L +G G +G+V LA + + + +AVK++ + DC + K E K
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENI--KKEICINKML 61
Query: 106 ESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
++V +G + +++ G + DRI G +P PD R+ QL G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 119
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
LH IG E D L + DFG+ + + + + GT Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNKMXGTLPYVAPELL 178
Query: 225 EPEVRGPISFE-TDTWGFGCSIMEMLTGIQPW 255
+ R E D W G + ML G PW
Sbjct: 179 K---RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
+IG G G V +AT S +AVK + K+ ++ N E + + + ++
Sbjct: 31 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 82
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
V ++ ++ ++ + M+F EG ++ D + R + I + + + +S LH+
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 139
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
G ++ L DFG + S +GTP +MAPE
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 193
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
R P E D W G ++EM+ G P+F + K I LPP ++N+
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 243
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
+IG G G V +AT S +AVK + K+ ++ N E + + + ++
Sbjct: 27 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 78
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
V ++ ++ ++ + M+F EG ++ D + R + I + + + +S LH+
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 135
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
G ++ L DFG + S +GTP +MAPE
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 189
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
R P E D W G ++EM+ G P+F + K I LPP ++N+
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 239
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
+IG G G V +AT S +AVK + K+ ++ N E + + + ++
Sbjct: 36 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 87
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
V ++ ++ ++ + M+F EG ++ D + R + I + + + +S LH+
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 144
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
G ++ L DFG + S +GTP +MAPE
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 198
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
R P E D W G ++EM+ G P+F + K I LPP ++N+
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 248
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 140 QQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLL 199
Q R L L ++ Y QL+ ++ L S D + LGDFG
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG----- 536
Query: 200 LGRSLSDSDM--ALRLGTP-NYMAPEQWEPEVRGPISFE-----TDTWGFGCSIMEMLT- 250
L R + DS A + P +MAPE I+F +D W FG + E+L
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPES--------INFRRFTSASDVWMFGVCMWEILMH 588
Query: 251 GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
G++P+ G ++ + + P +P PP + +++ C+ YD RP ++
Sbjct: 589 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
+IG G G V +AT S +AVK + K+ ++ N E + + + ++
Sbjct: 38 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 89
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
V ++ ++ ++ + M+F EG ++ D + R + I + + + +S LH+
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 146
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
G ++ L DFG + S +GTP +MAPE
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 200
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
R P E D W G ++EM+ G P+F + K I LPP ++N+
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 250
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
+IG G G V +AT S +AVK + K+ ++ N E + + + ++
Sbjct: 81 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 132
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
V ++ ++ ++ + M+F EG ++ D + R + I + + + +S LH+
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 189
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
G ++ L DFG + S +GTP +MAPE
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 243
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
R P E D W G ++EM+ G P+F + K I LPP ++N+
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 293
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
R+ P ++APE + + D W F + E++T P+ S EI V ++
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG 227
Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
+P IP G+ P V ++ C D RP I+ E Q+
Sbjct: 228 LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 123 ICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXX 181
I + M++ +G + DRI + L IL + Q+ +GI +H +
Sbjct: 161 IVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQMYILHLDLKPENIL 219
Query: 182 XXEHD--QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTW 239
D Q+ + DFG L R + + GTP ++APE + +SF TD W
Sbjct: 220 CVNRDAKQIKIIDFG----LARRYKPREKLKVNFGTPEFLAPEVVNYDF---VSFPTDMW 272
Query: 240 GFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
G +L+G+ P+ G + E ++++
Sbjct: 273 SVGVIAYMLLSGLSPFLGDNDAETLNNIL 301
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
G + DRI G +P PD R+ QL G+ LH IG E D L +
Sbjct: 89 GELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFE-TDTWGFGCSIMEMLT 250
DFG+ + + + + GT Y+APE + R E D W G + ML
Sbjct: 147 DFGLATVFRYNN-RERLLNKMCGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLA 202
Query: 251 GIQPW 255
G PW
Sbjct: 203 GELPW 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 25/274 (9%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
++ LKL IG+G FGDV L + + ++AVK + K D A+ F+ +
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYRGN--------KVAVKCI---KNDATAQAFLAE-A 237
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ 157
+ + R S V L I G + I ++ +GS+ D + + L +L++ +
Sbjct: 238 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 297
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
+ + + L E + + DFG L + S + +L
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPV-K 351
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
+ APE + S ++D W FG + E+ + G P+ ++++ V K K
Sbjct: 352 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 407
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P G PPAV +V+ C+ D RP + E
Sbjct: 408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 107/278 (38%), Gaps = 23/278 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL-PLKEDCAKVFVNKFE 98
++ L L +IGRG FG+V+ + AD+ +AVK L D F+ +
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVF--SGRLRADN----TLVAVKSCRETLPPDLKAKFLQEAR 164
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
L K ++ L G+ I I M+ +G + G +L + +L+
Sbjct: 165 IL--KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMA----LRLG 214
A G+ L S E + L + DFG + R +D A LR
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG-----MSREEADGVYAASGGLRQV 277
Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK 273
+ APE G S E+D W FG + E + G P+ S ++ V
Sbjct: 278 PVKWTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
PC P P AV ++ C+ Y+ RP + I +S
Sbjct: 335 PC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 27/239 (11%)
Query: 32 TPTQTRPWIDPTSLK-------LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP 84
+P ++ ID ++L+ L +G G +G V+ H ++ +LA ++
Sbjct: 6 SPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTG-------QLAAIKVMD 58
Query: 85 LKEDCAKVFVNKFEELFPKFRESQSVCWLHGISV------INGKICIAMKFY-EGSVGDR 137
+ D + + + K+ +++ +G + ++ ++ + M+F GSV D
Sbjct: 59 VTGDEEEEIKQEIN-MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 138 IAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPY 197
I +G L I ++ +G+S LH E+ ++ L DFG+
Sbjct: 118 IKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS- 176
Query: 198 LLLGRSLSDSDMALRLGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
L R++ + + GTP +MAPE + F++D W G + +EM G P
Sbjct: 177 AQLDRTVGRRNTFI--GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 21/277 (7%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
++ L L +IGRG FG+V+ + AD+ + + L P D F+ +
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVF--SGRLRADNTLVAVKSCRETLPP---DLKAKFLQEARI 165
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
L K ++ L G+ I I M+ +G + G +L + +L+ A
Sbjct: 166 L--KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMA----LRLGT 215
G+ L S E + L + DFG + R +D A LR
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG-----MSREEADGVXAASGGLRQVP 278
Query: 216 PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
+ APE G S E+D W FG + E + G P+ S ++ V P
Sbjct: 279 VKWTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP 335
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
C P P AV ++ C+ Y+ RP + I +S
Sbjct: 336 C-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
+IG G G V LA S ++AVKM+ K+ ++ N E + + + +
Sbjct: 52 KIGEGSTGIVCLAREKHSG------RQVAVKMMDLRKQQRRELLFN--EVVIMRDYQHFN 103
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
V ++ ++ ++ + M+F +G ++ D ++Q R + + + +Q ++ LH+
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQ---ALAYLHAQ 160
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPNYMAPEQWE 225
G ++ L DFG + D+ R +GTP +MAPE
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKXLVGTPYWMAPEVIS 214
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKS 259
R + E D W G ++EM+ G P+F S
Sbjct: 215 ---RSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLG 191
G + DRI G +P PD R+ QL G+ LH IG E D L +
Sbjct: 90 GELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFE-TDTWGFGCSIMEMLT 250
DFG+ + + + + GT Y+APE + R E D W G + ML
Sbjct: 148 DFGLATVFRYNN-RERLLNKMCGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLA 203
Query: 251 GIQPW 255
G PW
Sbjct: 204 GELPW 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 103/273 (37%), Gaps = 27/273 (9%)
Query: 40 IDPTSLK---LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
+DP L+ L IGRG + V L ++ D + + V + +D +V
Sbjct: 3 MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKT----DRIYAMKVVKKELVNDDEDIDWVQT 58
Query: 97 FEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYG 155
+ +F + + LH ++ +++ G GD + QR KLP Y
Sbjct: 59 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYS 116
Query: 156 IQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-G 214
+++ ++ LH G + L D+G + L D G
Sbjct: 117 AEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSXFCG 172
Query: 215 TPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF--------GKSVEEIYHS 266
TPNY+APE E G F D W G + EM+ G P+ ++ E+
Sbjct: 173 TPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
V+++K+ IP L +V+ D + R
Sbjct: 230 VILEKQIR-IPRSLSVKAASVLKSFLNKDPKER 261
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 61
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 62 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 118
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 119 QYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFG-----LTKVLPQDKEYYK 173
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 233
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 234 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 18/287 (6%)
Query: 25 HLRTVVATPTQTRPWIDPTSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLL 83
H V P DP L K RIG+G FG+V+ +++ ++ ++
Sbjct: 4 HSPVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRT-------QQVVAIKII 56
Query: 84 PLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG 143
L+E ++ + E +S V +G + K+ I M++ G G + R
Sbjct: 57 DLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGG--GSALDLLRA 114
Query: 144 GKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRS 203
G I ++ KG+ LHS E + L DFG+ L
Sbjct: 115 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 174
Query: 204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEI 263
+ + +GTP +MAPE + + + D W G + +E+ G P +
Sbjct: 175 IKRNTF---VGTPFWMAPEVIQ---QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV 228
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
++ K P + + + I C D RP ++L H F
Sbjct: 229 LF-LIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ G+ LHS G + + + DFG+ L + GTP
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL---KMPHEKHYTLCGTP 176
Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
NY++PE G E+D W GC +L G P+ +V+ + VV+ + +
Sbjct: 177 NYISPEIATRSAHG---LESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE--M 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAFESSQNAVYNDGE 321
PS L +++I + +R ++ +L H F S ++ + E
Sbjct: 232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDE 277
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 67
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 68 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 124
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 125 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 179
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 180 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 239
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 240 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 60
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 61 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 117
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEFFK 172
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 65
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 66 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 122
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 177
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 178 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 237
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 238 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS 109
+IG G G V +AT S +AVK + K+ ++ N E + + + ++
Sbjct: 158 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFN--EVVIMRDYQHEN 209
Query: 110 VCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
V ++ ++ ++ + M+F EG ++ D + R + I + + + +S LH+
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQ 266
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
G ++ L DFG + S +GTP +MAPE
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELIS--- 320
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENV 287
R P E D W G ++EM+ G P+F + K I LPP ++N+
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------LKAMKMIRDNLPPRLKNL 370
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 91
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 92 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 148
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 203
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 263
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 264 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 110/289 (38%), Gaps = 33/289 (11%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 63
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFYEGSVGDRIAQQRGGKLPLPDILR 153
+ E L K + ++ G+ G+ + + M+F Q+ ++ +L+
Sbjct: 64 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ 121
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y Q+ KG+ L + +++ +GDFG L + L ++
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXKV 176
Query: 214 GTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE--------- 262
P + PE S +D W FG + E+ T I+ E
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 263 ----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 9 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 66
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 67 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 123
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 178
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 179 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 238
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 239 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 64
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 65 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 121
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 176
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 236
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 237 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 60
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 61 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 117
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 172
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 63
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 64 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 120
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 175
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 235
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 87/214 (40%), Gaps = 30/214 (14%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
R+GRG FG+V H+ D + + AVK + ++ V + EEL S
Sbjct: 65 RVGRGSFGEV-----HRMKDKQTGF-QCAVKKV--------RLEVFRVEELVACAGLSSP 110
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+G + I M+ EG S+G I Q G LP L Y Q +G+ LH+
Sbjct: 111 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHT 168
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
+ + L DFG L LG+SL D GT +MAPE
Sbjct: 169 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAPE 226
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPW 255
V G P + D W C ++ ML G PW
Sbjct: 227 V----VMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 58
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 59 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 115
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 116 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 170
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 230
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 231 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 87/214 (40%), Gaps = 30/214 (14%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
R+GRG FG+V H+ D + + AVK + ++ V + EEL S
Sbjct: 81 RVGRGSFGEV-----HRMKDKQTGF-QCAVKKV--------RLEVFRVEELVACAGLSSP 126
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+G + I M+ EG S+G I Q G LP L Y Q +G+ LH+
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHT 184
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
+ + L DFG L LG+SL D GT +MAPE
Sbjct: 185 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAPE 242
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPW 255
V G P + D W C ++ ML G PW
Sbjct: 243 V----VMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 59
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 60 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 116
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 117 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 171
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 231
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 232 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 114/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 63
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q ++ +L
Sbjct: 64 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLL 120
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 175
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 235
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 236 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%)
Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
R P ++APE + + D W F + E++T P+ S EI V ++
Sbjct: 168 RXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEG 227
Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQN 314
+P IP G+ P V + C D RP I+ E Q+
Sbjct: 228 LRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 40 IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
IDP+ L IG G FG V WL S DDF E E+ +K+ P
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHP- 82
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
+ L+G+ + IC+ +F E G + D + QR G
Sbjct: 83 -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 118
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+L + + +G++ L E+ + + DFG+ +L
Sbjct: 119 LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 178
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
+ S GT P +W PEV S ++D W FG + E+ + G P+ +S
Sbjct: 179 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 230
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
E+ + + KP + S V ++ C++ +RP + +L
Sbjct: 231 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLL 275
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 38/282 (13%)
Query: 40 IDPTSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
+DP L K RIG+G FG+V+ + + E+ ++ L+E ++ + E
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTK-------EVVAIKIIDLEEAEDEIEDIQQE 67
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
+S + G + + K+ I M++ G G + + G L I ++
Sbjct: 68 ITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGG--GSALDLLKPGPLEETYIATILREI 125
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR--LGTP 216
KG+ LHS E + L DFG+ L+D+ + +GTP
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGV-----AGQLTDTQIKRNXFVGTP 180
Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI 276
+MAPE + + F+ D W G + +E+ G P +++ V+ I
Sbjct: 181 FWMAPEVIK---QSAYDFKADIWSLGITAIELAKGEPP-----NSDLHPMRVLF----LI 228
Query: 277 PSGLPPAVE--------NVIIGCFEYDLRNRPLMADIL-HAF 309
P PP +E + C D R RP ++L H F
Sbjct: 229 PKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V + + D+ E +AVK L E+ + F
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFER 60
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDIL 152
+ E L K + ++ G+ G+ + + M++ GS+ D + Q+ ++ +L
Sbjct: 61 EIEIL--KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLL 117
Query: 153 RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR 212
+Y Q+ KG+ L + +++ +GDFG L + L +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXK 172
Query: 213 LGTPNYMAPEQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------- 262
+ P + PE S +D W FG + E+ T I+ E
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 263 -----IYHSVVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
++H + + K + P G P + ++ C+ ++ RP D+
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 31/277 (11%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
++ LKL IG+G FGDV L + +++AVK + K D A+ F+ +
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCI---KNDATAQAFLAE-A 56
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ 157
+ + R S V L I G + I ++ +GS+ D + + L +L++ +
Sbjct: 57 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 116
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
+ + + L E + + DFG L + S + +L
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKL---- 167
Query: 218 YMAPEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEK 273
P +W PE +F T D W FG + E+ + G P+ ++++ V K K
Sbjct: 168 ---PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYK 223
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P G PPAV V+ C+ D RP + E
Sbjct: 224 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 260
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
IGRG + V L ++ D + + V + +D +V + +F + +
Sbjct: 13 IGRGSYAKVLLVRLKKT----DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 68
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIG 169
LH ++ +++ G GD + QR KLP Y +++ ++ LH G
Sbjct: 69 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 170 XXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEV 228
+ L D+G + L D GTPNY+APE E
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWF--------GKSVEEIYHSVVIKKEKPCIPSGL 280
G F D W G + EM+ G P+ ++ E+ V+++K+ IP L
Sbjct: 183 YG---FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSL 238
Query: 281 PPAVENVIIGCFEYDLRNR 299
+V+ D + R
Sbjct: 239 SVKAASVLKSFLNKDPKER 257
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 87/214 (40%), Gaps = 30/214 (14%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
R+GRG FG+V H+ D + + AVK + ++ V + EEL S
Sbjct: 79 RLGRGSFGEV-----HRMKDKQTGF-QCAVKKV--------RLEVFRVEELVACAGLSSP 124
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+G + I M+ EG S+G I Q G LP L Y Q +G+ LH+
Sbjct: 125 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHT 182
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
+ + L DFG L LG+SL D GT +MAPE
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAPE 240
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPW 255
V G P + D W C ++ ML G PW
Sbjct: 241 V----VMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 40 IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
IDP+ L IG G FG V WL S +DF E E+ +K+ P
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 62
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
+ L+G+ + IC+ +F E G + D + QR G
Sbjct: 63 -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 98
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+L + + +G++ L E+ + + DFG+ +L
Sbjct: 99 LFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
+ S GT P +W PEV S ++D W FG + E+ + G P+ +S
Sbjct: 159 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
E+ + + KP + S V ++ C++ +RP + +L
Sbjct: 211 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLL 255
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
IGRG + V L ++ D + + V + +D +V + +F + +
Sbjct: 60 IGRGSYAKVLLVRLKKT----DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIG 169
LH ++ +++ G GD + QR KLP Y +++ ++ LH G
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 170 XXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEV 228
+ L D+G + L D GTPNY+APE E
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWF--------GKSVEEIYHSVVIKKEKPCIPSGL 280
G F D W G + EM+ G P+ ++ E+ V+++K+ IP L
Sbjct: 230 YG---FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSL 285
Query: 281 PPAVENVIIGCFEYDLRNR 299
+V+ D + R
Sbjct: 286 SVKAASVLKSFLNKDPKER 304
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 111/281 (39%), Gaps = 30/281 (10%)
Query: 45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
LK ++G+G FG V + + D+ E +AVK L E+ + F + E L K
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIEIL--KS 85
Query: 105 RESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
+ ++ G+ G+ + + M++ GS+ D + Q+ ++ +L+Y Q+ KG
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKG 144
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
+ L + +++ +GDFG L + L ++ P
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXKVKEPGESPI 199
Query: 222 EQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------------IYHS 266
+ PE S +D W FG + E+ T I+ E ++H
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 267 VVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ + K + P G P + ++ C+ ++ RP D+
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 25/274 (9%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
++ LKL IG+G FGDV L + +++AVK + K D A+ F+ +
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCI---KNDATAQAFLAE-A 65
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ 157
+ + R S V L I G + I ++ +GS+ D + + L +L++ +
Sbjct: 66 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 125
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
+ + + L E + + DFG L + S + +L
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPV-K 179
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
+ APE + S ++D W FG + E+ + G P+ ++++ V K K
Sbjct: 180 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 235
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P G PPAV V+ C+ D RP + E
Sbjct: 236 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 17/211 (8%)
Query: 122 KICIAMKFYEGSVGDRIAQQRGG-KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXX 180
+I + M + EG G+ + R + P P Y ++ + LHS
Sbjct: 80 QIFMIMDYIEG--GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENI 137
Query: 181 XXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWG 240
++ + + DFG + + D L GTP+Y+APE + P + D W
Sbjct: 138 LLDKNGHIKITDFG-----FAKYVPDVTYXL-CGTPDYIAPEVVSTK---PYNKSIDWWS 188
Query: 241 FGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
FG I EML G P++ + + Y ++ + + P V++++ DL R
Sbjct: 189 FGILIYEMLAGYTPFYDSNTMKTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQR- 245
Query: 301 LMADILHAFESSQNAV-YNDGEWTGLGSRAL 330
+ ++ + E +N + + W L SR +
Sbjct: 246 -LGNLQNGTEDVKNHPWFKEVVWEKLLSRNI 275
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 111/281 (39%), Gaps = 30/281 (10%)
Query: 45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
LK ++G+G FG V + + D+ E +AVK L E+ + F + E L K
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIEIL--KS 85
Query: 105 RESQSVCWLHGISVINGK--ICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
+ ++ G+ G+ + + M++ GS+ D + Q+ ++ +L+Y Q+ KG
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKG 144
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAP 221
+ L + +++ +GDFG L + L ++ P
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFG-----LTKVLPQDKEXXKVKEPGESPI 199
Query: 222 EQWEPE--VRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE-------------IYHS 266
+ PE S +D W FG + E+ T I+ E ++H
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 267 VVIKKEKPCI--PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ + K + P G P + ++ C+ ++ RP D+
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 29/249 (11%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML--LPLKEDCAKVFVNKFEELFPKF 104
++ +G G FG V LATH+++ ++A+K + LK+ + V + E + K
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQ------QKVALKFISRQLLKKSDMHMRVER-EISYLKL 65
Query: 105 RESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISD 164
+ L+ + I + +++ G + D I +++ ++ + R+ Q+ I
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEY 123
Query: 165 LHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQ 223
H ++ + + DFG L ++D + + G+PNY APE
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFG-----LSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 224 WEPEVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCI---PSG 279
++ GP E D W G + ML G P+ + + ++ KK C+ P
Sbjct: 179 INGKLYAGP---EVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----KKVNSCVYVMPDF 230
Query: 280 LPPAVENVI 288
L P +++I
Sbjct: 231 LSPGAQSLI 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 116/300 (38%), Gaps = 32/300 (10%)
Query: 33 PTQ---TRPWIDP-TSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKED 88
PTQ W P +L+ +G G FG V AT + D ++AVKML
Sbjct: 17 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE-DAVLKVAVKMLKSTAHA 75
Query: 89 CAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-------------EGSVG 135
K + ++ + +++ L G G + + ++ E +G
Sbjct: 76 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 136 DRIA---------QQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHD 186
+A ++ G L L D+L + Q+A+G++ L S
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 195
Query: 187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
+GDFG+ ++ S RL +MAPE V + ++D W +G +
Sbjct: 196 VAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLW 251
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
E+ + G+ P+ G V ++ +V + P+ P + +++ C+ + +RP I
Sbjct: 252 EIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
IGRG + V L ++ D + + V + +D +V + +F + +
Sbjct: 28 IGRGSYAKVLLVRLKKT----DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 111 CWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLHSIG 169
LH ++ +++ G GD + QR KLP Y +++ ++ LH G
Sbjct: 84 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 170 XXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPEQWEPEV 228
+ L D+G + L D GTPNY+APE E
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 229 RGPISFETDTWGFGCSIMEMLTGIQPWF--------GKSVEEIYHSVVIKKEKPCIPSGL 280
G F D W G + EM+ G P+ ++ E+ V+++K+ IP +
Sbjct: 198 YG---FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSM 253
Query: 281 PPAVENVIIGCFEYDLRNR 299
+V+ D + R
Sbjct: 254 SVKAASVLKSFLNKDPKER 272
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 40 IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
IDP+ L IG G FG V WL S +DF E E+ +K+ P
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 62
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
+ L+G+ + IC+ +F E G + D + QR G
Sbjct: 63 -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 98
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+L + + +G++ L E+ + + DFG+ +L
Sbjct: 99 LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
+ S GT P +W PEV S ++D W FG + E+ + G P+ +S
Sbjct: 159 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
E+ + + KP + S V ++ C++ +RP + +L
Sbjct: 211 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLL 255
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 25/274 (9%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKFE 98
++ LKL IG+G FGDV L + +++AVK + K D A+ F+ +
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCI---KNDATAQAFLAE-A 50
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ 157
+ + R S V L I G + I ++ +GS+ D + + L +L++ +
Sbjct: 51 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
+ + + L E + + DFG L + S + +L
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPV-K 164
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
+ APE + S ++D W FG + E+ + G P+ ++++ V K K
Sbjct: 165 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 220
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P G PPAV V+ C+ D RP + E
Sbjct: 221 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 254
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 40 IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
IDP+ L IG G FG V WL S +DF E E+ +K+ P
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 60
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
+ L+G+ + IC+ +F E G + D + QR G
Sbjct: 61 -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 96
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+L + + +G++ L E+ + + DFG+ +L
Sbjct: 97 LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
+ S GT P +W PEV S ++D W FG + E+ + G P+ +S
Sbjct: 157 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 208
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
E+ + + KP + S V ++ C++ +RP + +L
Sbjct: 209 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLL 253
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 19/222 (8%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKML---LPLKEDCAKVFVNKFEELFPKFRES 107
+G+G FG V LA ++ D + AVK+L + L++D + + + + + R
Sbjct: 31 LGKGSFGKVMLARVKETGDLY------AVKVLKKDVILQDDDVECTMTE-KRILSLARNH 83
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRYGIQLAKGISDLH 166
+ L ++ M+F G GD + Q+ + Y ++ + LH
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNG--GDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 167 SIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEP 226
G L DFG+ + ++ + GTP+Y+APE +
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC---GTPDYIAPEILQE 198
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
+ GP D W G + EML G P+ ++ ++++ +++
Sbjct: 199 MLYGP---AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 57/288 (19%)
Query: 40 IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
IDP+ L IG G FG V WL S +DF E E+ +K+ P
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 65
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
+ L+G+ + IC+ +F E G + D + QR G
Sbjct: 66 -----------------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-G 101
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+L + + +G++ L E+ + + DFG+ +L
Sbjct: 102 LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
+ S GT P +W PEV S ++D W FG + E+ + G P+ +S
Sbjct: 162 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 213
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
E+ + + KP + S V ++ C+ +RP + +L
Sbjct: 214 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWRERPEDRPAFSRLL 258
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 119/311 (38%), Gaps = 38/311 (12%)
Query: 22 DPDHL---RTVVATPTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL 77
DPD L P W P LKL +GRG FG V A D +
Sbjct: 4 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATXRTV 62
Query: 78 AVKMLLPLKEDCA----KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-G 132
AVKM LKE + +++ + L V L + G + + ++F + G
Sbjct: 63 AVKM---LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 133 SVGDRIAQQRGGKLP------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXX 180
++ + +R +P L ++ Y Q+AKG+ L S
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNI 179
Query: 181 XXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISFET 236
E + + + DFG L R + +R G +MAPE V + ++
Sbjct: 180 LLSEKNVVKICDFG-----LARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---YTIQS 231
Query: 237 DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYD 295
D W FG + E+ + G P+ G ++E + + + + P P + ++ C+ +
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 291
Query: 296 LRNRPLMADIL 306
RP ++++
Sbjct: 292 PSQRPTFSELV 302
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
LG +MAPE E + + DT+ F + +LTG P+ S +I +I++E
Sbjct: 187 LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 273 --KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+P IP PP + NVI C+ D + RP + I+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
LG +MAPE E + + DT+ F + +LTG P+ S +I +I++E
Sbjct: 187 LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 273 --KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+P IP PP + NVI C+ D + RP + I+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
LG +MAPE E + + DT+ F + +LTG P+ S +I +I++E
Sbjct: 187 LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 273 --KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+P IP PP + NVI C+ D + RP + I+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 57/288 (19%)
Query: 40 IDPTSLKLKHRIGRGPFGDV----WLATHH----------QSADDFDEYHELAVKMLLPL 85
IDP+ L IG G FG V WL S +DF E E+ +K+ P
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 63
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGG 144
+ L+G+ + IC+ +F E G + D + QR G
Sbjct: 64 -----------------------KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-G 99
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+L + + +G++ L E+ + + DFG+ +L
Sbjct: 100 LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159
Query: 205 SDSDMALRLGTPNYMAPEQW-EPEV--RGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
+ S GT P +W PEV S ++D W FG + E+ + G P+ +S
Sbjct: 160 TSST-----GTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 211
Query: 261 EEIYHSVV--IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
E+ + + KP + S V ++ C+ +RP + +L
Sbjct: 212 SEVVEDISTGFRLYKPRLAS---THVYQIMNHCWRERPEDRPAFSRLL 256
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALR-LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
LGDFG+ +L D D A +GTP YM+PEQ R + ++D W GC + E+
Sbjct: 157 LGDFGLARILN----HDEDFAKEFVGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYEL 209
Query: 249 LTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P+ S +E+ + K + IP + +I +RP + +IL
Sbjct: 210 CALMPPFTAFSQKELAGKIREGKFRR-IPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 190 LGDFGIPYLLLGRSLSDSDMAL--RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
LGDFG+ L +S + R+GTP++MAPE + R P D WG G +
Sbjct: 174 LGDFGVAI-----QLGESGLVAGGRVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFI 225
Query: 248 MLTGIQPWFGKSVEEIYHSVVIKKEK 273
+L+G P++G + E ++ ++ K K
Sbjct: 226 LLSGCLPFYG-TKERLFEGIIKGKYK 250
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+++G G FG V+ + + +AVK L + + + +F++ + Q
Sbjct: 37 NKMGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 109 --SVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ--LAKGIS 163
++ L G S +C+ + GS+ DR++ G PL +R I A GI+
Sbjct: 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGIN 147
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPE 222
LH E + DFG+ + + M R+ GT YMAPE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQTVMXXRIVGTTAYMAPE 205
Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
+RG I+ ++D + FG ++E++TG+
Sbjct: 206 A----LRGEITPKSDIYSFGVVLLEIITGL 231
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 101/263 (38%), Gaps = 39/263 (14%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
R+GRG FG+V +D + AVK + ++ V + EEL S
Sbjct: 100 RLGRGSFGEV------HRMEDKQTGFQCAVKKV--------RLEVFRAEELMACAGLTSP 145
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+G + I M+ EG S+G + +Q G LP L Y Q +G+ LHS
Sbjct: 146 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHS 203
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
+ L DFG L LG+SL D GT +MAPE
Sbjct: 204 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP--GTETHMAPE 261
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH---SVVIKKEKPCIPS 278
V G + D W C ++ ML G PW + + + I E P +
Sbjct: 262 V----VLGRSCDAKVDVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVRE 312
Query: 279 GLPPAVENVIIGCFEYDLRNRPL 301
+PP+ + + LR P+
Sbjct: 313 -IPPSCAPLTAQAIQEGLRKEPI 334
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 26/268 (9%)
Query: 46 KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML--LPLKEDCAKVFVNKFEELFPK 103
+L IG G F V LA H + + +A+K++ L D ++ K E K
Sbjct: 13 ELHETIGTGGFAKVKLACHILTGE------MVAIKIMDKNTLGSDLPRI---KTEIEALK 63
Query: 104 FRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRI-AQQRGGKLPLPDILRYGIQLAKG 161
Q +C L+ + KI + +++ G + D I +Q R + + R Q+
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---QIVSA 120
Query: 162 ISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR--LGTPNYM 219
++ +HS G E+ +L L DFG L + + D L+ G+ Y
Sbjct: 121 VAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFG----LCAKPKGNKDYHLQTCCGSLAYA 176
Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSG 279
APE + + + E D W G + ++ G P+ +V +Y ++ + K +P
Sbjct: 177 APELIQG--KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM--RGKYDVPKW 232
Query: 280 LPPAVENVIIGCFEYDLRNRPLMADILH 307
L P+ ++ + D + R M ++L+
Sbjct: 233 LSPSSILLLQQMLQVDPKKRISMKNLLN 260
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 40/283 (14%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC-AKVFVNKF- 97
I L +G+G FG V A Q F ++AVKML K D A + +F
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSF---VKVAVKML---KADIIASSDIEEFL 73
Query: 98 -EELFPKFRESQSVCWLHGISV---INGKICIAMKFY----EGSVGDRIAQQRGGK---- 145
E K + V L G+S+ G++ I M G + + R G+
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
LPL ++R+ + +A G+ L S E + + DFG L R +
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFG-----LSRKIY 188
Query: 206 DSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
D R G + + P +W E + +D W FG ++ E++T G P+ G
Sbjct: 189 SGDY-YRQGCASKL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA 246
Query: 262 EIYHSVV----IKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
EIY+ ++ +K+ C+ V +++ C+ D + RP
Sbjct: 247 EIYNYLIGGNRLKQPPECMEE-----VYDLMYQCWSADPKQRP 284
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 69
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 127
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG + + S +D+ GT +Y+ PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLC---GTLDYLPPEM 182
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 183 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 237
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG + + S +D+ GT +Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLC---GTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 17 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 65
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 123
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG + + S +D+ GT +Y+ PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLC---GTLDYLPPEM 178
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 179 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 233
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVL 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG + + S +D+ GT +Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLC---GTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+++G G FG V+ + + +AVK L + + + +F++ + Q
Sbjct: 37 NKMGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 109 --SVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ--LAKGIS 163
++ L G S +C+ + GS+ DR++ G PL +R I A GI+
Sbjct: 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGIN 147
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPE 222
LH E + DFG+ + + M R+ GT YMAPE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQTVMXSRIVGTTAYMAPE 205
Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
+RG I+ ++D + FG ++E++TG+
Sbjct: 206 A----LRGEITPKSDIYSFGVVLLEIITGL 231
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 15/218 (6%)
Query: 40 IDPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
+DP + ++ +G G FG V+ A + ++ A K++ E+ + ++ + E
Sbjct: 7 LDPNEVWEIVGELGDGAFGKVYKAKNKETG------ALAAAKVIETKSEEELEDYIVEIE 60
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
L + + L G +GK+ I ++F G D I + L P I Q+
Sbjct: 61 IL--ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 118
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
+ ++ LHS + L DFG+ L ++L D +GTP +
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL-KTLQKRDSF--IGTPYW 175
Query: 219 MAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
MAPE E P ++ D W G +++EM I+P
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEM-AQIEP 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 15/218 (6%)
Query: 40 IDPTSL-KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
+DP + ++ +G G FG V+ A + ++ A K++ E+ + ++ + E
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETG------ALAAAKVIETKSEEELEDYIVEIE 68
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
L + + L G +GK+ I ++F G D I + L P I Q+
Sbjct: 69 IL--ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 126
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
+ ++ LHS + L DFG+ L ++L D +GTP +
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL-KTLQKRDSF--IGTPYW 183
Query: 219 MAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
MAPE E P ++ D W G +++EM I+P
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEM-AQIEP 220
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 110 VCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL---H 166
+ +G +G+I I M+ +G D++ + + G++P + + I + KG++ L H
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 143
Query: 167 SIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEP 226
I ++ L DFG+ L+ DS +GT +YM+PE+ +
Sbjct: 144 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 196
Query: 227 EVRGPISFETDTWGFGCSIMEMLTGIQPW-FGKSVEEIYHSV--VIKKEKPCIPSGL-PP 282
S ++D W G S++EM G P G I+ + ++ + P +PSG+
Sbjct: 197 T---HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSL 253
Query: 283 AVENVIIGCFEYDLRNRPLMADI----LHAFESSQNA 315
++ + C ++N AD+ +HAF +A
Sbjct: 254 EFQDFVNKCL---IKNPAERADLKQLMVHAFIKRSDA 287
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXX 181
+ I M+F + G++ I ++RG KL L Q+ KG+ +HS
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 182 XXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGF 241
+ Q+ +GDFG+ L +D GT YM+PEQ + G E D +
Sbjct: 155 LVDTKQVKIGDFGLVTSL----KNDGKRXRSKGTLRYMSPEQISSQDYGK---EVDLYAL 207
Query: 242 GCSIMEML----TGIQ--PWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
G + E+L T + +F + I + KKEK + L E+
Sbjct: 208 GLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPED 258
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+++G G FG V+ + + +AVK L + + + +F++ + Q
Sbjct: 31 NKMGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 82
Query: 109 --SVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQ--LAKGIS 163
++ L G S +C+ + GS+ DR++ G PL +R I A GI+
Sbjct: 83 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGIN 141
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL-GTPNYMAPE 222
LH E + DFG+ + M R+ GT YMAPE
Sbjct: 142 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQXVMXXRIVGTTAYMAPE 199
Query: 223 QWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
+RG I+ ++D + FG ++E++TG+
Sbjct: 200 A----LRGEITPKSDIYSFGVVLLEIITGL 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 116/307 (37%), Gaps = 44/307 (14%)
Query: 39 WIDPTSLKLKHR-------------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL 85
+IDPT L H+ +G G FG V AT + D +AVKML P
Sbjct: 6 YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKMLKPS 64
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGG 144
+ + ++ ++ L G I G + ++ G + + + ++R
Sbjct: 65 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 124
Query: 145 KL---PLPDIL-------------RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQL 188
+ P I+ + Q+AKG++ L S
Sbjct: 125 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT 184
Query: 189 VLGDFGIPYLLLGRSL-SDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCS 244
+ DFG L R + +DS+ ++ N P +W E +FE+D W +G
Sbjct: 185 KICDFG-----LARDIKNDSNYVVK---GNARLPVKWMAPESIFNCVYTFESDVWSYGIF 236
Query: 245 IMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMA 303
+ E+ + G P+ G V+ ++ ++ + + P P + +++ C++ D RP
Sbjct: 237 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296
Query: 304 DILHAFE 310
I+ E
Sbjct: 297 QIVQLIE 303
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 116/307 (37%), Gaps = 44/307 (14%)
Query: 39 WIDPTSLKLKHR-------------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL 85
+IDPT L H+ +G G FG V AT + D +AVKML P
Sbjct: 29 YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKMLKPS 87
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGG 144
+ + ++ ++ L G I G + ++ G + + + ++R
Sbjct: 88 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 147
Query: 145 KL---PLPDIL-------------RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQL 188
+ P I+ + Q+AKG++ L S
Sbjct: 148 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT 207
Query: 189 VLGDFGIPYLLLGRSL-SDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCS 244
+ DFG L R + +DS+ ++ N P +W E +FE+D W +G
Sbjct: 208 KICDFG-----LARDIKNDSNYVVK---GNARLPVKWMAPESIFNCVYTFESDVWSYGIF 259
Query: 245 IMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMA 303
+ E+ + G P+ G V+ ++ ++ + + P P + +++ C++ D RP
Sbjct: 260 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 319
Query: 304 DILHAFE 310
I+ E
Sbjct: 320 QIVQLIE 326
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S A GT +Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 67
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S A GT +Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRAALCGTLDYLPPEM 180
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 181 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 235
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 14/275 (5%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
I P+ + + IG G FG+V+ S+ + +A+K L + +V
Sbjct: 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEV--PVAIKTLKAGYTEKQRVDFLGEAG 98
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
+ +F ++ L G+ + I ++ E D+ +++ G+ + ++ +A
Sbjct: 99 IMGQFSH-HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIA 157
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
G+ L ++ + + DFG L R L D D T
Sbjct: 158 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFG-----LSRVLED-DPEATYTTSGGK 211
Query: 220 APEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC 275
P +W PE F + D W FG + E++T G +P++ S E+ ++ P
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT 271
Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ + RP ADI+ +
Sbjct: 272 -PMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 56/287 (19%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
ID ++++ +GRG FG V A ++A+K + E K F+ + +
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAK--------DVAIKQIESESER--KAFIVELRQ 55
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLP-----DILRY 154
L ++ L+G + +C+ M++ EG + G PLP + +
Sbjct: 56 L--SRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSW 108
Query: 155 GIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLL---GRSLSDSD--- 208
+Q ++G++ LHS+ + L+ D P LLL G L D
Sbjct: 109 CLQCSQGVAYLHSM---------------QPKALIHRDLKPPNLLLVAGGTVLKICDFGT 153
Query: 209 -------MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW--FGKS 259
M G+ +MAPE +E S + D + +G + E++T +P+ G
Sbjct: 154 ACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP 210
Query: 260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
I +V P I LP +E+++ C+ D RP M +I+
Sbjct: 211 AFRIMWAVHNGTRPPLI-KNLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 123 ICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXX 181
+ I M+F + G++ I ++RG KL L Q+ KG+ +HS
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 182 XXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGF 241
+ Q+ +GDFG+ L +D GT YM+PEQ + G E D +
Sbjct: 169 LVDTKQVKIGDFGLVTSL----KNDGKRTRSKGTLRYMSPEQISSQDYGK---EVDLYAL 221
Query: 242 GCSIMEML----TGIQ--PWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
G + E+L T + +F + I + KKEK + L E+
Sbjct: 222 GLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPED 272
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 31/221 (14%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ + + G++P + + I + KG++ L
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L+ ++ +GT +YM+PE+
Sbjct: 125 EKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF-----VGTRSYMSPER 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
+ S ++D W G S++EM G P ++ E+ +V +P P LP A
Sbjct: 178 LQGT---HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV---NEP--PPKLPSA 229
Query: 284 V-----ENVIIGCFEYDLRNRPLMADI----LHAFESSQNA 315
V ++ + C ++N AD+ +HAF +A
Sbjct: 230 VFSLEFQDFVNKCL---IKNPAERADLKQLMVHAFIKRSDA 267
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 116/307 (37%), Gaps = 44/307 (14%)
Query: 39 WIDPTSLKLKHR-------------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL 85
+IDPT L H+ +G G FG V AT + D +AVKML P
Sbjct: 29 YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKMLKPS 87
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGG 144
+ + ++ ++ L G I G + ++ G + + + ++R
Sbjct: 88 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 147
Query: 145 KL---PLPDIL-------------RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQL 188
+ P I+ + Q+AKG++ L S
Sbjct: 148 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT 207
Query: 189 VLGDFGIPYLLLGRSL-SDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCS 244
+ DFG L R + +DS+ ++ N P +W E +FE+D W +G
Sbjct: 208 KICDFG-----LARHIKNDSNYVVK---GNARLPVKWMAPESIFNCVYTFESDVWSYGIF 259
Query: 245 IMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMA 303
+ E+ + G P+ G V+ ++ ++ + + P P + +++ C++ D RP
Sbjct: 260 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 319
Query: 304 DILHAFE 310
I+ E
Sbjct: 320 QIVQLIE 326
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 100/263 (38%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 67
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG + + S D+ GT +Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRDDLC---GTLDYLPPEM 180
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 181 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 235
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 40/313 (12%)
Query: 22 DPDHL---RTVVATPTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL 77
DPD L P W P LKL +GRG FG V A D +
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTV 60
Query: 78 AVKMLLPLKEDCA----KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-G 132
AVKM LKE + +++ + L V L + G + + ++F + G
Sbjct: 61 AVKM---LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 133 SVGDRIAQQRGGKLP--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXX 178
++ + +R +P L ++ Y Q+AKG+ L S
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 179 XXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISF 234
E + + + DFG L R + +R G +MAPE V +
Sbjct: 178 NILLSEKNVVKICDFG-----LARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---YTI 229
Query: 235 ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
++D W FG + E+ + G P+ G ++E + + + + P P + ++ C+
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
Query: 294 YDLRNRPLMADIL 306
+ RP ++++
Sbjct: 290 GEPSQRPTFSELV 302
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 116/307 (37%), Gaps = 44/307 (14%)
Query: 39 WIDPTSLKLKHR-------------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL 85
+IDPT L H+ +G G FG V AT + D +AVKML P
Sbjct: 24 YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKMLKPS 82
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGG 144
+ + ++ ++ L G I G + ++ G + + + ++R
Sbjct: 83 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 142
Query: 145 KL---PLPDIL-------------RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQL 188
+ P I+ + Q+AKG++ L S
Sbjct: 143 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT 202
Query: 189 VLGDFGIPYLLLGRSL-SDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCS 244
+ DFG L R + +DS+ ++ N P +W E +FE+D W +G
Sbjct: 203 KICDFG-----LARDIKNDSNYVVK---GNARLPVKWMAPESIFNCVYTFESDVWSYGIF 254
Query: 245 IMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMA 303
+ E+ + G P+ G V+ ++ ++ + + P P + +++ C++ D RP
Sbjct: 255 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 314
Query: 304 DILHAFE 310
I+ E
Sbjct: 315 QIVQLIE 321
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 56/287 (19%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
ID ++++ +GRG FG V A ++A+K + E K F+ + +
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAK--------DVAIKQIESESER--KAFIVELRQ 54
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLP-----DILRY 154
L ++ L+G + +C+ M++ EG + G PLP + +
Sbjct: 55 L--SRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSW 107
Query: 155 GIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLL---GRSLSDSD--- 208
+Q ++G++ LHS+ + L+ D P LLL G L D
Sbjct: 108 CLQCSQGVAYLHSM---------------QPKALIHRDLKPPNLLLVAGGTVLKICDFGT 152
Query: 209 -------MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW--FGKS 259
M G+ +MAPE +E S + D + +G + E++T +P+ G
Sbjct: 153 ACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP 209
Query: 260 VEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
I +V P I LP +E+++ C+ D RP M +I+
Sbjct: 210 AFRIMWAVHNGTRPPLI-KNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 100/263 (38%), Gaps = 39/263 (14%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP-KFRESQ 108
R+GRG FG+V +D + AVK + ++ V + EEL S
Sbjct: 81 RLGRGSFGEV------HRMEDKQTGFQCAVKKV--------RLEVFRAEELMACAGLTSP 126
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+G + I M+ EG S+G + +Q G LP L Y Q +G+ LHS
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHS 184
Query: 168 IGXXX-XXXXXXXXXXXEHDQLVLGDFGIPYLL----LGRSLSDSDMALRLGTPNYMAPE 222
+ L DFG L LG+ L D GT +MAPE
Sbjct: 185 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP--GTETHMAPE 242
Query: 223 QWEPEVRG-PISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYH---SVVIKKEKPCIPS 278
V G + D W C ++ ML G PW + + + I E P +
Sbjct: 243 V----VLGRSCDAKVDVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVRE 293
Query: 279 GLPPAVENVIIGCFEYDLRNRPL 301
+PP+ + + LR P+
Sbjct: 294 -IPPSCAPLTAQAIQEGLRKEPI 315
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 95/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 69
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G V + Q+ K Y +LA +S
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALS 127
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 183 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 237
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 40/313 (12%)
Query: 22 DPDHL---RTVVATPTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL 77
DPD L P W P LKL +GRG FG V A D +
Sbjct: 39 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTV 97
Query: 78 AVKMLLPLKEDCA----KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-G 132
AVKM LKE + +++ + L V L + G + + ++F + G
Sbjct: 98 AVKM---LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 133 SVGDRIAQQRGGKLP--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXX 178
++ + +R +P L ++ Y Q+AKG+ L S
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 214
Query: 179 XXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISF 234
E + + + DFG L R + +R G +MAPE V +
Sbjct: 215 NILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---YTI 266
Query: 235 ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
++D W FG + E+ + G P+ G ++E + + + + P P + ++ C+
Sbjct: 267 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 326
Query: 294 YDLRNRPLMADIL 306
+ RP ++++
Sbjct: 327 GEPSQRPTFSELV 339
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 114/299 (38%), Gaps = 37/299 (12%)
Query: 33 PTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA- 90
P W P LKL +GRG FG V A D +AVKM LKE
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKM---LKEGATH 62
Query: 91 ---KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKL 146
+ +++ + L V L + G + + ++F + G++ + +R +
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 122
Query: 147 P--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGD 192
P L ++ Y Q+AKG+ L S E + + + D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 193 FGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
FG L R + +R G +MAPE V + ++D W FG + E+
Sbjct: 183 FG-----LARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---YTIQSDVWSFGVLLWEI 234
Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ G P+ G ++E + + + + P P + ++ C+ + RP ++++
Sbjct: 235 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 221 PEQW-EPEVRGPISF--ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE F ++D W FG + E + G +P+ G E+ +++ K E+
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 229
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG 320
P+G P + +++ C+ YD+ NRP A + + V N+G
Sbjct: 230 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 273
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
LGDFG+ +L + S +GTP YM+PEQ R + ++D W GC + E+
Sbjct: 157 LGDFGLARIL---NHDTSFAKTFVGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELC 210
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P+ S +E+ + K + IP + +I +RP + +IL
Sbjct: 211 ALMPPFTAFSQKELAGKIREGKFRR-IPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 40/313 (12%)
Query: 22 DPDHL---RTVVATPTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL 77
DPD L P W P LKL +GRG FG V A D +
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTV 60
Query: 78 AVKMLLPLKEDCA----KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-G 132
AVKM LKE + +++ + L V L + G + + ++F + G
Sbjct: 61 AVKM---LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 133 SVGDRIAQQRGGKLP--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXX 178
++ + +R +P L ++ Y Q+AKG+ L S
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 179 XXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISF 234
E + + + DFG L R + +R G +MAPE V +
Sbjct: 178 NILLSEKNVVKICDFG-----LARDIYKDPDXVRKGDARLPLKWMAPETIFDRV---YTI 229
Query: 235 ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
++D W FG + E+ + G P+ G ++E + + + + P P + ++ C+
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
Query: 294 YDLRNRPLMADIL 306
+ RP ++++
Sbjct: 290 GEPSQRPTFSELV 302
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 191 IGDFG-----MARDIYRASYYRKGGCA--MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 243
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 244 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 301
Query: 305 ILHAFE 310
IL E
Sbjct: 302 ILERIE 307
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGC 243
EH + + DF I +L R + MA GT YMAPE + SF D W G
Sbjct: 150 EHGHVHITDFNIA-AMLPRETQITTMA---GTKPYMAPEMFSSRKGAGYSFAVDWWSLGV 205
Query: 244 SIMEMLTGIQPWF---GKSVEEIYHS 266
+ E+L G +P+ S +EI H+
Sbjct: 206 TAYELLRGRRPYHIRSSTSSKEIVHT 231
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 211 IGDFG-----MARDIYRASYYRKGGCA--MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 263
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 264 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 321
Query: 305 ILHAFE 310
IL E
Sbjct: 322 ILERIE 327
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 199 IGDFG-----MARDIYRASYYRKGGCA--MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 252 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 309
Query: 305 ILHAFE 310
IL E
Sbjct: 310 ILERIE 315
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
LGDFG+ +L + S +GTP YM+PEQ R + ++D W GC + E+
Sbjct: 157 LGDFGLARIL---NHDTSFAKAFVGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELC 210
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P+ S +E+ + K + IP + +I +RP + +IL
Sbjct: 211 ALMPPFTAFSQKELAGKIREGKFRR-IPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 176 IGDFG-----MARDIYRASYYRKGGC--AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 228
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 229 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 286
Query: 305 ILHAFE 310
IL E
Sbjct: 287 ILERIE 292
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 185 IGDFG-----MARDIYRASYYRKGGCA--MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 238 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 295
Query: 305 ILHAFE 310
IL E
Sbjct: 296 ILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 199 IGDFG-----MARDIYRASYYRKGGCA--MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 252 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 309
Query: 305 ILHAFE 310
IL E
Sbjct: 310 ILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 185 IGDFG-----MARDIYRASYYRKGGCA--MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 238 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 295
Query: 305 ILHAFE 310
IL E
Sbjct: 296 ILERIE 301
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 17/223 (7%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
+ +G G FG V T + ++F A K ++ E K V K + R
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNF------AAKFVMTPHE-SDKETVRKEIQTMSVLRH 213
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH 166
V N + I G + +++A + K+ + + Y Q+ KG+ +H
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMH 272
Query: 167 SIGXXXXXXX--XXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
++L L DFG+ L + + + GT + APE
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPEVA 328
Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
E + P+ + TD W G +L+G+ P+ G++ +E +V
Sbjct: 329 EGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 40/313 (12%)
Query: 22 DPDHL---RTVVATPTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL 77
DPD L P W P LKL +GRG FG V A D +
Sbjct: 4 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTV 62
Query: 78 AVKMLLPLKEDCA----KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-G 132
AVKM LKE + +++ + L V L + G + + ++F + G
Sbjct: 63 AVKM---LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 133 SVGDRIAQQRGGKLP--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXX 178
++ + +R +P L ++ Y Q+AKG+ L S
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 179
Query: 179 XXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISF 234
E + + + DFG L R + +R G +MAPE V +
Sbjct: 180 NILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---YTI 231
Query: 235 ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
++D W FG + E+ + G P+ G ++E + + + + P P + ++ C+
Sbjct: 232 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 291
Query: 294 YDLRNRPLMADIL 306
+ RP ++++
Sbjct: 292 GEPSQRPTFSELV 304
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ + + G++P + + I + KG++ L
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L+ DS +GT +YM+PE+
Sbjct: 184 EKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPER 236
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTG---IQPWFGKSVEEIY 264
+ S ++D W G S++EM G I P K +E ++
Sbjct: 237 LQ---GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 277
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 199 IGDFG-----MARDIYRASYYRKGGCA--MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 252 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 309
Query: 305 ILHAFE 310
IL E
Sbjct: 310 ILERIE 315
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 40/313 (12%)
Query: 22 DPDHL---RTVVATPTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHEL 77
DPD L P W P LKL +GRG FG V A D +
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTV 60
Query: 78 AVKMLLPLKEDCA----KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-G 132
AVKM LKE + +++ + L V L + G + + ++F + G
Sbjct: 61 AVKM---LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 133 SVGDRIAQQRGGKLP--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXX 178
++ + +R +P L ++ Y Q+AKG+ L S
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 179 XXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISF 234
E + + + DFG L R + +R G +MAPE V +
Sbjct: 178 NILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---YTI 229
Query: 235 ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFE 293
++D W FG + E+ + G P+ G ++E + + + + P P + ++ C+
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
Query: 294 YDLRNRPLMADIL 306
+ RP ++++
Sbjct: 290 GEPSQRPTFSELV 302
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 201 IGDFG-----MARDIYRASYYRKGGCA--MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 253
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 254 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 311
Query: 305 ILHAFE 310
IL E
Sbjct: 312 ILERIE 317
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 95/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 69
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G V + Q+ K Y +LA +S
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALS 127
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRXXLXGTLDYLPPEM 182
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 183 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 237
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 113 LHGISVINGKICIAMKFYEGSVGDRIAQQ---RGGKLPLPDIL-RYGIQLAKGISDLHS- 167
+G G + I M+ + S+ D+ +Q +G +P DIL + + + K + LHS
Sbjct: 71 FYGALFREGDVWICMELMDTSL-DKFYKQVIDKGQTIP-EDILGKIAVSIVKALEHLHSK 128
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
+ Q+ + DFGI L+ D D G YMAPE+ PE
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA----GCKPYMAPERINPE 184
Query: 228 VRGP-ISFETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHSVVIKKEKPCIPSG-LPPA 283
+ S ++D W G +++E+ P+ +G +++ V+++ P +P+
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ--VVEEPSPQLPADKFSAE 242
Query: 284 VENVIIGCFEYDLRNRPLMADIL-HAF 309
+ C + + + RP +++ H F
Sbjct: 243 FVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 104/270 (38%), Gaps = 32/270 (11%)
Query: 41 DPTSLKLKHR-IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
DP L R IG G FG V+ A D +A+K + + + + + +E
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFAR------DVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 104
Query: 100 L--FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
+ K R ++ + G + + M++ GS D + K PL ++ +
Sbjct: 105 VRFLQKLRHPNTIQY-RGCYLREHTAWLVMEYCLGSASDLLEVH---KKPLQEVEIAAVT 160
Query: 158 --LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMA---LR 212
+G++ LHS E + LGDFG S S MA
Sbjct: 161 HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG----------SASIMAPANXF 210
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKK 271
+GTP +MAPE G + D W G + +E+ P F ++ +YH + +
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQN 268
Query: 272 EKPCIPSG-LPPAVENVIIGCFEYDLRNRP 300
E P + SG N + C + ++RP
Sbjct: 269 ESPALQSGHWSEYFRNFVDSCLQKIPQDRP 298
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 100/263 (38%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 42 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 90
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 148
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG + + S D+ GT +Y+ PE
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRDDLC---GTLDYLPPEM 203
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 204 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 258
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 259 ARDLISRLLKHNPSQRPMLREVL 281
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 184 IGDFG-----MARDIYRASYYRKGGC--AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 236
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 237 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 294
Query: 305 ILHAFE 310
IL E
Sbjct: 295 ILERIE 300
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIM 246
+GDFG + R + + + G M P +W P + G + +TDTW FG +
Sbjct: 184 IGDFG-----MARDIYRASYYRKGGC--AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 236
Query: 247 EMLT-GIQPWFGKSVEEIYHSVVI-KKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ KS +E+ V + P P P V ++ C+++ +RP A
Sbjct: 237 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAI 294
Query: 305 ILHAFE 310
IL E
Sbjct: 295 ILERIE 300
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 15/276 (5%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP-LKEDCAKVFVNKFE 98
ID + +K++ IG G FG+V + H E +A+K L E + F+++
Sbjct: 4 IDISCVKIEQVIGAGEFGEV--CSGHLKLPGKREIF-VAIKTLKSGYTEKQRRDFLSE-A 59
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
+ +F + +V L G+ + + I +F E D +Q G+ + ++ +
Sbjct: 60 SIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 118
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
A G+ L + + + DFG+ L + SD LG
Sbjct: 119 AAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDT-SDPTYTSALGGK-- 175
Query: 219 MAPEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +W PE F + D W +G + E+++ G +P++ + +++ +++ P
Sbjct: 176 -IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 234
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ D +RP I++ +
Sbjct: 235 P-PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 44/306 (14%)
Query: 40 IDPTSLKLKHR-------------IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLK 86
IDPT L H+ +G G FG V AT + D +AVKML P
Sbjct: 23 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKMLKPSA 81
Query: 87 EDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGK 145
+ + ++ ++ L G I G + ++ G + + + ++R
Sbjct: 82 HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 141
Query: 146 L---PLPDIL-------------RYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLV 189
+ P I+ + Q+AKG++ L S
Sbjct: 142 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 201
Query: 190 LGDFGIPYLLLGRSL-SDSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSI 245
+ DFG L R + +DS+ ++ N P +W E +FE+D W +G +
Sbjct: 202 ICDFG-----LARDIKNDSNYVVK---GNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 253
Query: 246 MEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMAD 304
E+ + G P+ G V+ ++ ++ + + P P + +++ C++ D RP
Sbjct: 254 WELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 313
Query: 305 ILHAFE 310
I+ E
Sbjct: 314 IVQLIE 319
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 97/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 20 LGKGKFGNVYLARERQSK------FILALKVLFKTQLEKAGV-----EHQLRREVEIQSH 68
Query: 111 CWLHGISVINGKICIAMKFYE-------GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ + Y +LA +S
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYITELANALS 126
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS + +L + DFG S GT +Y+ PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G+ P+ + +E Y I + + P +
Sbjct: 182 IEGRMHDE---KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRR--ISRVEFTFPDFVTEG 236
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ R +A++L
Sbjct: 237 ARDLISRLLKHNASQRLTLAEVL 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG + + S +++ GT +Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTELC---GTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 221 PEQW-EPEVRGPISF--ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE F ++D W FG + E + G +P+ G E+ +++ K E+
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 241
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYNDG 320
P+G P + +++ C+ YD+ NRP A + + V N+G
Sbjct: 242 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ + + G++P + + I + KG++ L
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L+ DS +GT +YM+PE+
Sbjct: 149 EKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPER 201
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+ S ++D W G S++EM G P
Sbjct: 202 LQGT---HYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 113/299 (37%), Gaps = 37/299 (12%)
Query: 33 PTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA- 90
P W P LKL +GRG FG V A D +AVKM LKE
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKM---LKEGATH 62
Query: 91 ---KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKL 146
+ +++ + L V L + G + + +F + G++ + +R +
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 147 P--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGD 192
P L ++ Y Q+AKG+ L S E + + + D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 193 FGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
FG L R + +R G +MAPE V + ++D W FG + E+
Sbjct: 183 FG-----LARDIXKDPDXVRKGDARLPLKWMAPETIFDRV---YTIQSDVWSFGVLLWEI 234
Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ G P+ G ++E + + + + P P + ++ C+ + RP ++++
Sbjct: 235 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTXLCGTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 20 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 68
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 126
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 182 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 236
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 237 ARDLISRLLKHNPSQRPMLREVL 259
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIP-YLLLGRSLSDSDMALR 212
Y ++ G+ DLH +H + + D G+ ++ G+++ R
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG-----R 345
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
+GT YMAPE + E +F D W GC + EM+ G P+
Sbjct: 346 VGTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSVVIKK 271
+GTP + APE +E + + D + FG +E T P+ ++ +IY V
Sbjct: 191 IGTPEFXAPEXYEEKYDESV----DVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGV 246
Query: 272 EKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL-HAF 309
+ P V+ +I GC + R + D+L HAF
Sbjct: 247 KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 17/223 (7%)
Query: 47 LKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRE 106
+ +G G FG V T + ++F A K ++ E K V K + R
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNF------AAKFVMTPHE-SDKETVRKEIQTMSVLRH 107
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH 166
V N + I G + +++A + K+ + + Y Q+ KG+ +H
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMH 166
Query: 167 SIGXXXXXXX--XXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
++L L DFG+ L + + + GT + APE
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPEVA 222
Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
E + P+ + TD W G +L+G+ P+ G++ +E +V
Sbjct: 223 EGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 262
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 104/270 (38%), Gaps = 32/270 (11%)
Query: 41 DPTSLKLKHR-IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
DP L R IG G FG V+ A D +A+K + + + + + +E
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFAR------DVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65
Query: 100 L--FPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQ 157
+ K R ++ + G + + M++ GS D + K PL ++ +
Sbjct: 66 VRFLQKLRHPNTIQY-RGCYLREHTAWLVMEYCLGSASDLLEVH---KKPLQEVEIAAVT 121
Query: 158 --LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMA---LR 212
+G++ LHS E + LGDFG S S MA
Sbjct: 122 HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG----------SASIMAPANXF 171
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFG-KSVEEIYHSVVIKK 271
+GTP +MAPE G + D W G + +E+ P F ++ +YH + +
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQN 229
Query: 272 EKPCIPSG-LPPAVENVIIGCFEYDLRNRP 300
E P + SG N + C + ++RP
Sbjct: 230 ESPALQSGHWSEYFRNFVDSCLQKIPQDRP 259
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIP-YLLLGRSLSDSDMALR 212
Y ++ G+ DLH +H + + D G+ ++ G+++ R
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG-----R 345
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
+GT YMAPE + E +F D W GC + EM+ G P+
Sbjct: 346 VGTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 67
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 181 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 235
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 219 MAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI-KKEK 273
M P +W P + G + +TDTW FG + E+ + G P+ KS +E+ V +
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P P V ++ C+++ +RP A IL E
Sbjct: 267 P--PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
R+GTP++MAPE + R P D WG G + +L+G P++G + E ++ ++ K
Sbjct: 195 RVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGK 250
Query: 272 EK 273
K
Sbjct: 251 YK 252
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 15 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 63
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 121
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 176
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 177 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 231
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 232 ARDLISRLLKHNPSQRPMLREVL 254
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 219 MAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI-KKEK 273
M P +W P + G + +TDTW FG + E+ + G P+ KS +E+ V +
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 306
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P P V ++ C+++ +RP A IL E
Sbjct: 307 P--PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ + + G++P + + I + KG++ L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L DS +GT +YM+PE+
Sbjct: 122 EKHKI--MHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+ S ++D W G S++EM G P
Sbjct: 175 LQ---GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 219 MAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVI-KKEK 273
M P +W P + G + +TDTW FG + E+ + G P+ KS +E+ V +
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 283
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P P V ++ C+++ +RP A IL E
Sbjct: 284 P--PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 190 LGDFGIPYLLLGRSLSDS-DMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
LGD I + R + + ++ +GTP Y+APE + PI+ TD W G +
Sbjct: 170 LGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD---PITTATDMWNIGIIAYML 226
Query: 249 LTGIQPWFGKSVEEIYHSV 267
LT P+ G+ +E Y ++
Sbjct: 227 LTHTSPFVGEDNQETYLNI 245
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRXXLCGTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 69
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 127
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 183 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 237
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ + + G++P + + I + KG++ L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L DS +GT +YM+PE+
Sbjct: 122 EKHKI--MHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+ S ++D W G S++EM G P
Sbjct: 175 LQ---GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ + + G++P + + I + KG++ L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L+ DS +GT +YM+PE+
Sbjct: 122 EKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPER 174
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+ S ++D W G S++EM G P
Sbjct: 175 LQ---GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 212 RLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKK 271
R+GTP++MAPE + R P D WG G + +L+G P++G + E ++ ++ K
Sbjct: 193 RVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGK 248
Query: 272 EK 273
K
Sbjct: 249 YK 250
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 67
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 181 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 235
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ + + G++P + + I + KG++ L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L DS +GT +YM+PE+
Sbjct: 122 EKHKI--MHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+ S ++D W G S++EM G P
Sbjct: 175 LQGT---HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ + + G++P + + I + KG++ L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L DS +GT +YM+PE+
Sbjct: 122 EKHKI--MHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+ S ++D W G S++EM G P
Sbjct: 175 LQGT---HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 232 ISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIG 290
S ++D W FG + E + G +P+ G E+ +++ K E+ P+G P + +++
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNL 608
Query: 291 CFEYDLRNRPLMADI 305
C+ YD+ NRP A +
Sbjct: 609 CWTYDVENRPGFAAV 623
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDL- 165
S + +G +G+I I M+ +G D++ ++ ++P + + I + +G++ L
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLR 131
Query: 166 --HSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H I ++ L DFG+ L+ DS +GT +YMAPE+
Sbjct: 132 EKHQI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMAPER 184
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTG---IQPWFGKSVEEIYHSVVIKKEK 273
+ S ++D W G S++E+ G I P K +E I+ V+ E+
Sbjct: 185 LQ---GTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEE 234
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 67
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRXXLCGTLDYLPPEM 180
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 181 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 235
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 232 ISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIG 290
S ++D W FG + E + G +P+ G E+ +++ K E+ P+G P + +++
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNL 607
Query: 291 CFEYDLRNRPLMADI 305
C+ YD+ NRP A +
Sbjct: 608 CWTYDVENRPGFAAV 622
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 15/276 (5%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLP-LKEDCAKVFVNKFE 98
ID + +K++ IG G FG+V + H E +A+K L E + F+++
Sbjct: 30 IDISCVKIEQVIGAGEFGEV--CSGHLKLPGKREIF-VAIKTLKSGYTEKQRRDFLSE-A 85
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
+ +F + +V L G+ + + I +F E D +Q G+ + ++ +
Sbjct: 86 SIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 144
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
A G+ L + + + DFG+ L + SD LG
Sbjct: 145 AAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT-SDPTYTSALGGK-- 201
Query: 219 MAPEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +W PE F + D W +G + E+++ G +P++ + +++ +++ P
Sbjct: 202 -IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 260
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ D +RP I++ +
Sbjct: 261 P-PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 18 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 66
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 124
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRXXLCGTLDYLPPEM 179
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 180 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 234
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVL 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 33 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 81
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 139
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 194
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 195 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 249
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 250 ARDLISRLLKHNPSQRPMLREVL 272
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 113/299 (37%), Gaps = 37/299 (12%)
Query: 33 PTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA- 90
P W P LKL +GRG FG V A D +AVKM LKE
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKM---LKEGATH 62
Query: 91 ---KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKL 146
+ +++ + L V L + G + + +F + G++ + +R +
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 147 P--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGD 192
P L ++ Y Q+AKG+ L S E + + + D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 193 FGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
FG L R + +R G +MAPE V + ++D W FG + E+
Sbjct: 183 FG-----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---YTIQSDVWSFGVLLWEI 234
Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ G P+ G ++E + + + + P P + ++ C+ + RP ++++
Sbjct: 235 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 120/299 (40%), Gaps = 26/299 (8%)
Query: 26 LRTVV-----ATPTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHE 76
LRT V PTQT +D T++ + +G G FG+V + +
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEIS 75
Query: 77 LAVKML-LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG 135
+A+K L + E + F+ + + +F + ++ L G+ + + I ++ E
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGI 195
D ++ + + ++ +A G+ L +G + + DFG
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG- 192
Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-G 251
LGR L D D T P +W PE F + D W +G + E+++ G
Sbjct: 193 ----LGRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+P++ S +++ +V P P P A+ +++ C++ D NRP I+ +
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIME 247
+ DFG L ++L + + T + + PE F ++D W FG + E
Sbjct: 152 ISDFG-----LSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
Query: 248 MLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
+ G +P+ G E+ +++ K E+ P+G P + +++ C+ YD+ NRP A +
Sbjct: 207 AFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 17 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 65
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 123
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSCHAPSSRRTTLSGTLDYLPPEM 178
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 179 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 233
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVL 256
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 97/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 20 LGKGKFGNVYLARERQSK------FILALKVLFKTQLEKAGV-----EHQLRREVEIQSH 68
Query: 111 CWLHGISVINGKICIAMKFYE-------GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ + Y +LA +S
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYITELANALS 126
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS + +L + DFG S GT +Y+ PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFG-----WSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G+ P+ + +E Y I + + P +
Sbjct: 182 IEGRMHDE---KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRR--ISRVEFTFPDFVTEG 236
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ R +A++L
Sbjct: 237 ARDLISRLLKHNASQRLTLAEVL 259
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 113/299 (37%), Gaps = 37/299 (12%)
Query: 33 PTQTRPWIDPTS-LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA- 90
P W P LKL +GRG FG V A D +AVKM LKE
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKM---LKEGATH 62
Query: 91 ---KVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKL 146
+ +++ + L V L + G + + +F + G++ + +R +
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 147 P--------------LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGD 192
P L ++ Y Q+AKG+ L S E + + + D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 193 FGIPYLLLGRSLSDSDMALRLGTP----NYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
FG L R + +R G +MAPE V + ++D W FG + E+
Sbjct: 183 FG-----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---YTIQSDVWSFGVLLWEI 234
Query: 249 LT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ G P+ G ++E + + + + P P + ++ C+ + RP ++++
Sbjct: 235 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 221 PEQW-EPEVRGPISF--ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE F ++D W FG + E + G +P+ G E+ +++ K E+
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 235
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
P+G P + +++ C+ YD+ NRP A +
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRPGFAAV 264
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 99/265 (37%), Gaps = 34/265 (12%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL--FPKFRESQ 108
+G G FG V + H + H++AVK+L K V E+ FR
Sbjct: 24 LGVGTFGKVKVGKHELTG------HKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+ + I + M++ G + D I + G+L + R Q+ G+ H
Sbjct: 78 -IIKLYQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQWEP 226
H + DFG L +SD + + G+PNY APE
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFG-----LSNMMSDGEFLRXSCGSPNYAAPEVISG 189
Query: 227 EVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPC-----IPSGL 280
+ GP E D W G + +L G P+ V ++ +K C P L
Sbjct: 190 RLYAGP---EVDIWSSGVILYALLCGTLPFDDDHVPTLF-------KKICDGIFYTPQYL 239
Query: 281 PPAVENVIIGCFEYDLRNRPLMADI 305
P+V +++ + D R + DI
Sbjct: 240 NPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 221 PEQW-EPEVRGPISF--ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE F ++D W FG + E + G +P+ G E+ +++ K E+
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 231
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
P+G P + +++ C+ YD+ NRP A +
Sbjct: 232 PAGCPREMYDLMNLCWTYDVENRPGFAAV 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 17 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 65
Query: 111 CWLHGISVINGKICIAMKFYE-------GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 123
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRDTLCGTLDYLPPEM 178
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 179 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 233
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVL 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 42 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 90
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 148
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 203
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 204 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 258
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 259 ARDLISRLLKHNPSQRPMLREVL 281
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQS- 109
+G+G FG+V+LA S LA+K+L + + A V E + E QS
Sbjct: 16 LGKGKFGNVYLAREKNSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 64
Query: 110 -----VCWLHGISVINGKICIAMKFYE-GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
+ L+G + ++ + +++ G+V + Q+ K Y +LA +S
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S A GT +Y+ PE
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + ++ Y I + + P +
Sbjct: 178 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQDTYKR--ISRVEFTFPDFVTEG 232
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 221 PEQW-EPEVRGPISF--ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE F ++D W FG + E + G +P+ G E+ +++ K E+
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 249
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
P+G P + +++ C+ YD+ NRP A +
Sbjct: 250 PAGCPREMYDLMNLCWTYDVENRPGFAAV 278
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 95/259 (36%), Gaps = 22/259 (8%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF--VNKFEELFPKFRESQ 108
+G G FG V + H + H++AVK+L K V + + + FR
Sbjct: 19 LGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
+ IS + G + D I + G++ + R Q+ + H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH 130
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLL-GRSLSDSDMALRLGTPNYMAPEQWEPE 227
H + DFG+ ++ G L DS G+PNY APE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS-----CGSPNYAAPEVISGR 185
Query: 228 VR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
+ GP E D W G + +L G P+ + V ++ I+ IP L +V
Sbjct: 186 LYAGP---EVDIWSCGVILYALLCGTLPFDDEHVPTLFKK--IRGGVFYIPEYLNRSVAT 240
Query: 287 VIIGCFEYDLRNRPLMADI 305
+++ + D R + DI
Sbjct: 241 LLMHMLQVDPLKRATIKDI 259
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 43/285 (15%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE---LFPKFRES 107
IG G FG V+ A ++ + +AVKML KE+ + F+ L +F ++
Sbjct: 55 IGEGAFGRVFQA-RAPGLLPYEPFTMVAVKML---KEEASADMQADFQREAALMAEF-DN 109
Query: 108 QSVCWLHGISVINGKICIAMKFY-----------------------EGSVGDRIAQQRGG 144
++ L G+ + +C+ ++ + S R++
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
L + L Q+A G++ L E+ + + DFG L R++
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFG-----LSRNI 224
Query: 205 SDSDMALRLGTPNYMAPEQWEPE---VRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSV 260
+D G N P +W P + E+D W +G + E+ + G+QP++G +
Sbjct: 225 YSADYYKADG--NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282
Query: 261 EEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
EE+ + V C P P + N++ C+ +RP I
Sbjct: 283 EEVIYYVRDGNILAC-PENCPLELYNLMRLCWSKLPADRPSFCSI 326
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 22/184 (11%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH--SIGXXXXXXXXXXXXXXEHDQLV 189
G + DRIA + K+ +++ Y Q +G+ +H SI + +
Sbjct: 133 GELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVK 191
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
+ DFG L + D + + T + APE + R P+ F TD W G +L
Sbjct: 192 IIDFG----LATKLNPDEIVKVTTATAEFAAPEIVD---REPVGFYTDMWAIGVLGYVLL 244
Query: 250 TGIQPWFGKSVEEIYHSVVIKKEKPC-------IPSGLPPAVENVIIGCFEYDLRNRPLM 302
+G+ P+ G+ E +V K C S + P ++ I + + R R +
Sbjct: 245 SGLSPFAGEDDLETLQNV-----KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTV 299
Query: 303 ADIL 306
D L
Sbjct: 300 HDAL 303
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 221 PEQW-EPEVRGPISF--ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE F ++D W FG + E + G +P+ G E+ +++ K E+
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 251
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
P+G P + +++ C+ YD+ NRP A +
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRPGFAAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 221 PEQW-EPEVRGPISF--ETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCI 276
P +W PE F ++D W FG + E + G +P+ G E+ +++ K E+
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 251
Query: 277 PSGLPPAVENVIIGCFEYDLRNRPLMADI 305
P+G P + +++ C+ YD+ NRP A +
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRPGFAAV 280
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 67
Query: 111 CWLHGISVINGKICIAMKFYE-------GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 125
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + +FG S GT +Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFG-----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 181 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 235
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 184 EHDQLVLGDFGIPYLLLGRS-LSDSDMALRLGTPNYMAPEQWEPEVR-GPISFETDTWGF 241
+H + L DFG LL G S D ++A R Y +PE + + GP D W
Sbjct: 137 KHSVIKLCDFGFARLLTGPSDYYDDEVATRW----YRSPELLVGDTQYGP---PVDVWAI 189
Query: 242 GCSIMEMLTGIQPWFGKS-VEEIY 264
GC E+L+G+ W GKS V+++Y
Sbjct: 190 GCVFAELLSGVPLWPGKSDVDQLY 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
++G G +G V+ A H ++ +A+K +P++ D ++ E + +S
Sbjct: 35 EKLGEGSYGSVYKAIHKETG------QIVAIKQ-VPVESDLQEIIK---EISIMQQCDSP 84
Query: 109 SVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
V +G N + I M++ GSV D I + R L +I KG+ LH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHF 143
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALR---LGTPNYMAPEQW 224
+ L DFG+ L+D MA R +GTP +MA
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGV-----AGQLTDX-MAKRNXVIGTPFWMA---- 193
Query: 225 EPEVRGPISFE--TDTWGFGCSIMEMLTGIQPW 255
PEV I + D W G + +EM G P+
Sbjct: 194 -PEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 19/211 (9%)
Query: 109 SVCWLHGISVINGKIC-IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ L G+ V G++ I ++ E D + G+ + ++ + G+ L
Sbjct: 111 NIIRLEGV-VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE-P 226
+G + + DFG L R L D A T + P +W P
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFG-----LSRVLEDDPDAAXTTTGGKI-PIRWTAP 223
Query: 227 EVRGPISFET-----DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGL 280
E I+F T D W FG + E+L G +P++ + ++ SV P P G
Sbjct: 224 EA---IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGC 279
Query: 281 PPAVENVIIGCFEYDLRNRPLMADILHAFES 311
P A+ +++ C+ D RP + I+ ++
Sbjct: 280 PHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 113 LHGISVINGKICIAMKFYEGSVGDRIAQQ---RGGKLPLPDIL-RYGIQLAKGISDLHS- 167
+G G + I M+ + S+ D+ +Q +G +P DIL + + + K + LHS
Sbjct: 115 FYGALFREGDVWICMELMDTSL-DKFYKQVIDKGQTIP-EDILGKIAVSIVKALEHLHSK 172
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
+ Q+ + DFGI L+ D G YMAPE+ PE
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA----GCKPYMAPERINPE 228
Query: 228 VRGP-ISFETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHSVVIKKEKPCIPSG-LPPA 283
+ S ++D W G +++E+ P+ +G +++ V+++ P +P+
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ--VVEEPSPQLPADKFSAE 286
Query: 284 VENVIIGCFEYDLRNRPLMADIL-HAF 309
+ C + + + RP +++ H F
Sbjct: 287 FVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 96/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 18 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 66
Query: 111 CWLHGISVINGKICIAMKFYE-------GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 124
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + +FG S GT +Y+ PE
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFG-----WSVHAPSSRRTTLCGTLDYLPPEM 179
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 180 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 234
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVL 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 94/263 (35%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA QS LA+K+L + + A V E + E QS
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 69
Query: 111 CWLHGISVINGKICIAMKFY-------EGSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 127
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEX 182
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + D W G E L G P+ + +E Y I + + P +
Sbjct: 183 IEGRXHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 237
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP + ++L
Sbjct: 238 ARDLISRLLKHNPSQRPXLREVL 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 95/263 (36%), Gaps = 30/263 (11%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQSV 110
+G+G FG+V+LA Q LA+K+L + + A V E + E QS
Sbjct: 13 LGKGKFGNVYLAREKQRK------FILALKVLFKAQLEKAGV-----EHQLRREVEIQSH 61
Query: 111 CWLHGISVINGKICIAMKFYE-------GSVGDRIAQQRGGKLPLPDILRYGIQLAKGIS 163
I + G A + Y G+V + Q+ K Y +LA +S
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALS 119
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
HS +L + DFG S GT +Y+ PE
Sbjct: 120 YCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEM 174
Query: 224 WEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPA 283
E + + D W G E L G P+ + +E Y I + + P +
Sbjct: 175 IEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRVEFTFPDFVTEG 229
Query: 284 VENVIIGCFEYDLRNRPLMADIL 306
++I +++ RP++ ++L
Sbjct: 230 ARDLISRLLKHNPSQRPMLREVL 252
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 94/259 (36%), Gaps = 22/259 (8%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVF--VNKFEELFPKFRESQ 108
+G G FG V + H + H++AVK+L K V + + + FR
Sbjct: 19 LGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
+ IS + G + D I + G++ + R Q+ + H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH 130
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQWEPE 227
H + DFG L +SD + + G+PNY APE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFG-----LSNMMSDGEFLRTSCGSPNYAAPEVISGR 185
Query: 228 VR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVEN 286
+ GP E D W G + +L G P+ + V ++ I+ IP L +V
Sbjct: 186 LYAGP---EVDIWSCGVILYALLCGTLPFDDEHVPTLFKK--IRGGVFYIPEYLNRSVAT 240
Query: 287 VIIGCFEYDLRNRPLMADI 305
+++ + D R + DI
Sbjct: 241 LLMHMLQVDPLKRATIKDI 259
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 19/211 (9%)
Query: 109 SVCWLHGISVINGKIC-IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ L G+ V G++ I ++ E D + G+ + ++ + G+ L
Sbjct: 111 NIIRLEGV-VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE-P 226
+G + + DFG L R L D A T + P +W P
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFG-----LSRVLEDDPDAAYTTTGGKI-PIRWTAP 223
Query: 227 EVRGPISFET-----DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGL 280
E I+F T D W FG + E+L G +P++ + ++ SV P P G
Sbjct: 224 EA---IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGC 279
Query: 281 PPAVENVIIGCFEYDLRNRPLMADILHAFES 311
P A+ +++ C+ D RP + I+ ++
Sbjct: 280 PHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 139 AQQRGGKLP--LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIP 196
A+ G+ P L ++++ ++A G++ L++ + +GDFG
Sbjct: 115 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-- 172
Query: 197 YLLLGRSLSDSDMALRLGT----PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-G 251
+ R + ++D + G +MAPE + G + +D W FG + E+ +
Sbjct: 173 ---MTRDIXETDXXRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLA 226
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
QP+ G S E++ V+ P P V +++ C++++ + RP +I++ +
Sbjct: 227 EQPYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
++ L DFGI + + + ++ GTP ++APE E P+ E D W G
Sbjct: 150 RIKLIDFGIAH----KIEAGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITY 202
Query: 247 EMLTGIQPWFGKSVEEIYHSV 267
+L+G P+ G++ +E ++
Sbjct: 203 ILLSGASPFLGETKQETLTNI 223
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 218 YMAPEQWEPEVR--GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
+ APE + PEV +S TD W G + +L+GI P+ ++ ++I +++
Sbjct: 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
++ L DFGI + + + ++ GTP ++APE E P+ E D W G
Sbjct: 171 RIKLIDFGIAH----KIEAGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITY 223
Query: 247 EMLTGIQPWFGKSVEEIYHSV 267
+L+G P+ G++ +E ++
Sbjct: 224 ILLSGASPFLGETKQETLTNI 244
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 139 AQQRGGKLP--LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIP 196
A+ G+ P L ++++ ++A G++ L++ + +GDFG
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-- 175
Query: 197 YLLLGRSLSDSDMALRLGT----PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-G 251
+ R + ++D + G +MAPE + G + +D W FG + E+ +
Sbjct: 176 ---MTRDIXETDXXRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLA 229
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
QP+ G S E++ V+ P P V +++ C++++ + RP +I++ +
Sbjct: 230 EQPYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
++ L DFGI + + + ++ GTP ++APE E P+ E D W G
Sbjct: 157 RIKLIDFGIAH----KIEAGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITY 209
Query: 247 EMLTGIQPWFGKSVEEIYHSV 267
+L+G P+ G++ +E ++
Sbjct: 210 ILLSGASPFLGETKQETLTNI 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 26/299 (8%)
Query: 26 LRTVV-----ATPTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHE 76
LRT V PTQT +D T++ + +G G FG+V + +
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEIS 75
Query: 77 LAVKML-LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG 135
+A+K L + E + F+ + + +F + ++ L G+ + + I ++ E
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGI 195
D ++ + + ++ +A G+ L +G + + DFG
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG- 192
Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-G 251
L R L D D T P +W PE F + D W +G + E+++ G
Sbjct: 193 ----LARVLED-DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+P++ S +++ +V P P P A+ +++ C++ D NRP I+ +
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG 251
DFG+ ++ M R+GT Y+APE +RG + D W G + +L+G
Sbjct: 167 DFGLSTCFQ----QNTKMKDRIGTAYYIAPEV----LRGTYDEKCDVWSAGVILYILLSG 218
Query: 252 IQPWFGKSVEEIYHSV 267
P++GK+ +I V
Sbjct: 219 TPPFYGKNEYDILKRV 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG 251
DFG+ ++ M R+GT Y+APE +RG + D W G + +L+G
Sbjct: 167 DFGLSTCFQ----QNTKMKDRIGTAYYIAPEV----LRGTYDEKCDVWSAGVILYILLSG 218
Query: 252 IQPWFGKSVEEIYHSV 267
P++GK+ +I V
Sbjct: 219 TPPFYGKNEYDILKRV 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGC 243
E+ ++++ DFG L + + M+ GTP Y+APE + P S D W G
Sbjct: 144 ENSKIMITDFG-----LSKMEQNGIMSTACGTPGYVAPEVL---AQKPYSKAVDCWSIGV 195
Query: 244 SIMEMLTGIQPWFGKSVEEIYHSV 267
+L G P++ ++ +++ +
Sbjct: 196 ITYILLCGYPPFYEETESKLFEKI 219
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 105/264 (39%), Gaps = 20/264 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+IG+G G V+ +A D E+A++ + ++ ++ +N+ L + ++
Sbjct: 26 EKIGQGASGTVY------TAMDVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 77
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ ++ ++ + M++ G S+ D + + + + + R +Q + LHS
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHS 134
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
+ L DFG + S M +GTP +MAPE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAPEVVTRK 191
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPSGLPPAVEN 286
GP + D W G +EM+ G P+ ++ + +Y + P L +
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248
Query: 287 VIIGCFEYDLRNRPLMADIL-HAF 309
+ C E D+ R ++L H F
Sbjct: 249 FLNRCLEMDVEKRGSAKELLQHQF 272
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 26/299 (8%)
Query: 26 LRTVV-----ATPTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHE 76
LRT V PTQT +D T++ + +G G FG+V + +
Sbjct: 19 LRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEIS 75
Query: 77 LAVKML-LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG 135
+A+K L + E + F+ + + +F + ++ L G+ + + I ++ E
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGI 195
D ++ + + ++ +A G+ L +G + + DFG
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG- 192
Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-G 251
L R L D D T P +W PE F + D W +G + E+++ G
Sbjct: 193 ----LSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+P++ S +++ +V P P P A+ +++ C++ D NRP I+ +
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 184 EHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
E D L+ + DFG+ + + M RLGT Y+APE +R + D W G
Sbjct: 173 EKDALIKIVDFGLSAVFENQK----KMKERLGTAYYIAPEV----LRKKYDEKCDVWSIG 224
Query: 243 CSIMEMLTGIQPWFGKSVEEIYHSV 267
+ +L G P+ G++ +EI V
Sbjct: 225 VILFILLAGYPPFGGQTDQEILRKV 249
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 115/287 (40%), Gaps = 21/287 (7%)
Query: 33 PTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKE 87
PTQT +D T++ + +G G FG+V + + +A+K L + E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGYTE 87
Query: 88 DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLP 147
+ F+ + + +F + ++ L G+ + + I ++ E D ++ +
Sbjct: 88 KQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
+ ++ +A G+ L +G + + DFG L R L D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-----LSRVLED- 199
Query: 208 DMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
D T P +W PE F + D W +G + E+++ G +P++ S +++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+V P P P A+ +++ C++ D NRP I+ +
Sbjct: 260 IKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 26/299 (8%)
Query: 26 LRTVV-----ATPTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHE 76
LRT V PTQT +D T++ + +G G FG+V + +
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEIS 75
Query: 77 LAVKML-LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG 135
+A+K L + E + F+ + + +F + ++ L G+ + + I ++ E
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGI 195
D ++ + + ++ +A G+ L +G + + DFG
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG- 192
Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-G 251
L R L D D T P +W PE F + D W +G + E+++ G
Sbjct: 193 ----LSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+P++ S +++ +V P P P A+ +++ C++ D NRP I+ +
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 115/287 (40%), Gaps = 21/287 (7%)
Query: 33 PTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKE 87
PTQT +D T++ + +G G FG+V + + +A+K L + E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGYTE 87
Query: 88 DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLP 147
+ F+ + + +F + ++ L G+ + + I ++ E D ++ +
Sbjct: 88 KQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
+ ++ +A G+ L +G + + DFG L R L D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-----LSRVLED- 199
Query: 208 DMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
D T P +W PE F + D W +G + E+++ G +P++ S +++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+V P P P A+ +++ C++ D NRP I+ +
Sbjct: 260 IKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 26/299 (8%)
Query: 26 LRTVV-----ATPTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHE 76
LRT V PTQT +D T++ + +G G FG+V + +
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEIS 75
Query: 77 LAVKML-LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG 135
+A+K L + E + F+ + + +F + ++ L G+ + + I ++ E
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGI 195
D ++ + + ++ +A G+ L +G + + DFG
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFG- 192
Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-G 251
L R L D D T P +W PE F + D W +G + E+++ G
Sbjct: 193 ----LSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+P++ S +++ +V P P P A+ +++ C++ D NRP I+ +
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 106/264 (40%), Gaps = 20/264 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+IG+G G V+ +A D E+A++ + ++ ++ +N+ L + ++
Sbjct: 26 EKIGQGASGTVY------TAMDVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 77
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ ++ ++ + M++ G S+ D + + + + + R +Q + LHS
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHS 134
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
+ L DFG + S+M +GTP +MAPE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM---VGTPYWMAPEVVTRK 191
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPSGLPPAVEN 286
GP + D W G +EM+ G P+ ++ + +Y + P L +
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248
Query: 287 VIIGCFEYDLRNRPLMADIL-HAF 309
+ C + D+ R ++L H F
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQF 272
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 53/307 (17%)
Query: 41 DPT-----SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT LK +G G FG V L + + D E +AVK LKE C +
Sbjct: 2 DPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEM--VAVK---ALKEGCGPQLRS 56
Query: 96 KFEELFPKFRESQSVCWLHGISVINGKIC----------IAMKFYE-GSVGDRIAQQRGG 144
++ RE + + L+ ++ K C + M++ GS+ D + + G
Sbjct: 57 GWQ------REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG 110
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLV-LGDFGIPYLLLGRS 203
L +L + Q+ +G++ LH+ ++D+LV +GDFG L ++
Sbjct: 111 ---LAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLVKIGDFG-----LAKA 161
Query: 204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLTGI---QPWFGK 258
+ + R+ + PE F +D W FG ++ E+LT Q K
Sbjct: 162 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK 221
Query: 259 SVEEIYHS-----------VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
E I H+ ++ + E+ P P + +++ C+E + RP +++
Sbjct: 222 FTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVP 281
Query: 308 AFESSQN 314
+++Q
Sbjct: 282 ILQTAQE 288
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG 251
DFG+ ++ M R+GT Y+APE +RG + D W G + +L+G
Sbjct: 167 DFGLSTCFQ----QNTKMKDRIGTAYYIAPEV----LRGTYDEKCDVWSAGVILYILLSG 218
Query: 252 IQPWFGKSVEEIYHSV 267
P++GK+ +I V
Sbjct: 219 TPPFYGKNEYDILKRV 234
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 115/287 (40%), Gaps = 21/287 (7%)
Query: 33 PTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKE 87
PTQT +D T++ + +G G FG+V + + +A+K L + E
Sbjct: 29 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGYTE 85
Query: 88 DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLP 147
+ F+ + + +F + ++ L G+ + + I ++ E D ++ +
Sbjct: 86 KQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
+ ++ +A G+ L +G + + DFG L R L D
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-----LSRVLED- 197
Query: 208 DMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
D T P +W PE F + D W +G + E+++ G +P++ S +++
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 257
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+V P P P A+ +++ C++ D NRP I+ +
Sbjct: 258 IKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 139 AQQRGGKLP--LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIP 196
A+ G+ P L ++++ ++A G++ L++ + +GDFG
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-- 175
Query: 197 YLLLGRSLSDSDMALRLGT----PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-G 251
+ R + ++D + G +MAPE + G + +D W FG + E+ +
Sbjct: 176 ---MTRDIYETDYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLA 229
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
QP+ G S E++ V+ P P V +++ C++++ + RP +I++ +
Sbjct: 230 EQPYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 53/307 (17%)
Query: 41 DPT-----SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT LK +G G FG V L + + D E +AVK LKE C +
Sbjct: 1 DPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEM--VAVK---ALKEGCGPQLRS 55
Query: 96 KFEELFPKFRESQSVCWLHGISVINGKIC----------IAMKFYE-GSVGDRIAQQRGG 144
++ RE + + L+ ++ K C + M++ GS+ D + + G
Sbjct: 56 GWQ------REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG 109
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLV-LGDFGIPYLLLGRS 203
L +L + Q+ +G++ LH+ ++D+LV +GDFG L ++
Sbjct: 110 ---LAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLVKIGDFG-----LAKA 160
Query: 204 LSDSDMALRLGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLTGI---QPWFGK 258
+ + R+ + PE F +D W FG ++ E+LT Q K
Sbjct: 161 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK 220
Query: 259 SVEEIYHS-----------VVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
E I H+ ++ + E+ P P + +++ C+E + RP +++
Sbjct: 221 FTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVP 280
Query: 308 AFESSQN 314
+++Q
Sbjct: 281 ILQTAQE 287
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 139 AQQRGGKLP--LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIP 196
A+ G+ P L ++++ ++A G++ L++ + +GDFG
Sbjct: 117 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-- 174
Query: 197 YLLLGRSLSDSDMALRLGT----PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-G 251
+ R + ++D + G +MAPE + G + +D W FG + E+ +
Sbjct: 175 ---MTRDIYETDYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLA 228
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
QP+ G S E++ V+ P P V +++ C++++ + RP +I++ +
Sbjct: 229 EQPYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 19/253 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+IG+G G V+ +A D E+A++ + ++ ++ +N+ L + ++
Sbjct: 27 EKIGQGASGTVY------TAMDVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 78
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ ++ ++ + M++ G S+ D + + + + + R +Q + LHS
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHS 135
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
+ L DFG + S M +GTP +MAPE +
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRK 192
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPSGLPPAVEN 286
GP + D W G +EM+ G P+ ++ + +Y + P L +
Sbjct: 193 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 249
Query: 287 VIIGCFEYDLRNR 299
+ C E D+ R
Sbjct: 250 FLNRCLEMDVEKR 262
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 17/276 (6%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFE 98
+D T++ + +G G FG+V + + +A+K L + E + F+ +
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGYTEKQRRDFLGE-A 85
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
+ +F + ++ L G+ + + I ++ E D ++ + + ++ +
Sbjct: 86 SIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 144
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
A G+ L +G + + DFG L R L D D T
Sbjct: 145 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-----LSRVLED-DPEAAYTTRGG 198
Query: 219 MAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +W PE F + D W +G + E+++ G +P++ S +++ +V P
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 258
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ D NRP I+ +
Sbjct: 259 P-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 19/253 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+IG+G G V+ +A D E+A++ + ++ ++ +N+ L + ++
Sbjct: 27 EKIGQGASGTVY------TAMDVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 78
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ ++ ++ + M++ G S+ D + + + + + R +Q + LHS
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHS 135
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
+ L DFG + S M +GTP +MAPE +
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAPEVVTRK 192
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPSGLPPAVEN 286
GP + D W G +EM+ G P+ ++ + +Y + P L +
Sbjct: 193 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 249
Query: 287 VIIGCFEYDLRNR 299
+ C E D+ R
Sbjct: 250 FLNRCLEMDVEKR 262
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 4/178 (2%)
Query: 122 KICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXX 181
K+ + M++ + + + + P+ Y QL G+ LHS G
Sbjct: 82 KMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLL 141
Query: 182 XXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGF 241
L + G+ L + D+ + G+P + PE + F+ D W
Sbjct: 142 LTTGGTLKISALGVAEALHPFAADDTCRTSQ-GSPAFQPPEIAN-GLDTFSGFKVDIWSA 199
Query: 242 GCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR 299
G ++ + TG+ P+ G ++ +++ + I K IP P + +++ G EY+ R
Sbjct: 200 GVTLYNITTGLYPFEGDNIYKLFEN--IGKGSYAIPGDCGPPLSDLLKGMLEYEPAKR 255
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 33/266 (12%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
AT +P I + +L IG+G F V LA H + E+AVK++ D
Sbjct: 4 ATSADEQPHIG--NYRLLKTIGKGNFAKVKLARHILTG------KEVAVKII-----DKT 50
Query: 91 KVFVNKFEELFPKFRESQ-----SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGG 144
++ + ++LF + R + ++ L + + + M++ G V D + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--G 108
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPY-LLLGRS 203
++ + Q+ + H + + DFG G
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 204 LSDSDMALRLGTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
L G+P Y APE ++ + GP E D W G + +++G P+ G++++E
Sbjct: 169 LDTF-----CGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 263 IYHSVVIKKEKPCIPSGLPPAVENVI 288
+ V+ K + IP + EN++
Sbjct: 221 LRERVLRGKYR--IPFYMSTDCENLL 244
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 33/266 (12%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
AT +P I + +L IG+G F V LA H + E+AVK++ D
Sbjct: 4 ATSADEQPHIG--NYRLLKTIGKGNFAKVKLARHILTG------KEVAVKII-----DKT 50
Query: 91 KVFVNKFEELFPKFRESQ-----SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGG 144
++ + ++LF + R + ++ L + + + M++ G V D + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--G 108
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPY-LLLGRS 203
++ + Q+ + H + + DFG G
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 204 LSDSDMALRLGTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
L G+P Y APE ++ + GP E D W G + +++G P+ G++++E
Sbjct: 169 LDTF-----CGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 263 IYHSVVIKKEKPCIPSGLPPAVENVI 288
+ V+ K + IP + EN++
Sbjct: 221 LRERVLRGKYR--IPFYMSTDCENLL 244
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 119/316 (37%), Gaps = 27/316 (8%)
Query: 26 LRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL 85
LRT T + I+ + +L +G G +G V+L D Y +K +
Sbjct: 39 LRTANLTGHAEKVGIE--NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV 96
Query: 86 KEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGG 144
++ ++ R+S + LH K+ + + + G + ++Q+
Sbjct: 97 QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-- 154
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSL 204
+ ++ Y ++ + LH +G + +VL DFG+ +
Sbjct: 155 RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA--- 211
Query: 205 SDSDMALRL-GTPNYMAPEQWEPEVRGPISFE---TDTWGFGCSIMEMLTGIQPWF--GK 258
+++ A GT YMAP+ VRG S D W G + E+LTG P+ G+
Sbjct: 212 DETERAYDFCGTIEYMAPDI----VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267
Query: 259 SVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNR----PLMADILHAFESSQN 314
+ S I K +P P + +++I D + R P AD E ++
Sbjct: 268 KNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDAD-----EIKEH 322
Query: 315 AVYNDGEWTGLGSRAL 330
+ W L ++ +
Sbjct: 323 LFFQKINWDDLAAKKV 338
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 106/266 (39%), Gaps = 33/266 (12%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
AT +P I + +L IG+G F V LA H + E+AV+++ D
Sbjct: 4 ATSADEQPHIG--NYRLLKTIGKGNFAKVKLARHILTG------KEVAVRII-----DKT 50
Query: 91 KVFVNKFEELFPKFRESQ-----SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGG 144
++ + ++LF + R + ++ L + + + M++ G V D + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--G 108
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPY-LLLGRS 203
++ + Q+ + H + + DFG G
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 204 LSDSDMALRLGTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
L + G+P Y APE ++ + GP E D W G + +++G P+ G++++E
Sbjct: 169 LDEF-----CGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 263 IYHSVVIKKEKPCIPSGLPPAVENVI 288
+ V+ K + IP + EN++
Sbjct: 221 LRERVLRGKYR--IPFYMSTDCENLL 244
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
GTP ++APE E P+ E D W G +L+G P+ G + +E
Sbjct: 179 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 20/264 (7%)
Query: 49 HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKFRESQ 108
+IG+G G V+ +A D E+A++ + ++ ++ +N+ L + ++
Sbjct: 26 EKIGQGASGTVY------TAMDVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 77
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ ++ ++ + M++ G S+ D + + + + + R +Q + LHS
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHS 134
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPE 227
+ L DFG + S M +GTP +MAPE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRK 191
Query: 228 VRGPISFETDTWGFGCSIMEMLTGIQPWFGKS-VEEIYHSVVIKKEKPCIPSGLPPAVEN 286
GP + D W G +EM+ G P+ ++ + +Y + P L +
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248
Query: 287 VIIGCFEYDLRNRPLMADIL-HAF 309
+ C + D+ R ++L H F
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQF 272
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
GTP ++APE E P+ E D W G +L+G P+ G + +E
Sbjct: 179 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 17/276 (6%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFE 98
+D T++ + +G G FG+V + + +A+K L + E + F+ +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGYTEKQRRDFLGE-A 68
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
+ +F + ++ L G+ + + I ++ E D ++ + + ++ +
Sbjct: 69 SIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
A G+ L +G + + DFG L R L D D T
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-----LSRVLED-DPEAAYTTRGG 181
Query: 219 MAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +W PE F + D W +G + E+++ G +P++ S +++ +V P
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 241
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ D NRP I+ +
Sbjct: 242 P-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 13/164 (7%)
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ L I G + + M+ G + DRI ++ G D R Q+ + LH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHD 134
Query: 168 IGXXXXX---XXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
+G E ++++ DFG+ + S+ ++ GTP Y+APE
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV----LSTACGTPGYVAPEVL 190
Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
+ P S D W G +L G P++ ++ +++ ++
Sbjct: 191 ---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 177 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPAFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 178 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 12/140 (8%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXX---XXXXXXXXXEHDQL 188
G + DRI ++ G D R Q+ + LH +G E ++
Sbjct: 101 GELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 189 VLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEM 248
++ DFG+ + S+ ++ GTP Y+APE + P S D W G +
Sbjct: 159 MISDFGLSKMEDPGSV----LSTACGTPGYVAPEVL---AQKPYSKAVDCWSIGVIAYIL 211
Query: 249 LTGIQPWFGKSVEEIYHSVV 268
L G P++ ++ +++ ++
Sbjct: 212 LCGYPPFYDENDAKLFEQIL 231
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E +V
Sbjct: 177 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 23/222 (10%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN---KFEELFPKFRES 107
+G G FG V LA H + ++A+K++ K+ AK + + E + +
Sbjct: 21 LGEGSFGKVKLAYHTTTG------QKVALKIIN--KKVLAKSDMQGRIEREISYLRLLRH 72
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+ + +I + +++ + D I Q+ K+ + R+ Q+ + H
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR 130
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQWEP 226
EH + + DFG L ++D + + G+PNY APE
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFG-----LSNIMTDGNFLKTSCGSPNYAAPEVISG 185
Query: 227 EVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
++ GP E D W G + ML P+ +S+ ++ ++
Sbjct: 186 KLYAGP---EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 224
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
GTP ++APE E P+ E D W G +L+G P+ G + +E
Sbjct: 179 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 23/222 (10%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN---KFEELFPKFRES 107
+G G FG V LA H + ++A+K++ K+ AK + + E + +
Sbjct: 16 LGEGSFGKVKLAYHTTTG------QKVALKIIN--KKVLAKSDMQGRIEREISYLRLLRH 67
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+ + +I + +++ + D I Q+ K+ + R+ Q+ + H
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR 125
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQWEP 226
EH + + DFG L ++D + + G+PNY APE
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFG-----LSNIMTDGNFLKTSCGSPNYAAPEVISG 180
Query: 227 EVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
++ GP E D W G + ML P+ +S+ ++ ++
Sbjct: 181 KLYAGP---EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
GTP ++APE E P+ E D W G +L+G P+ G + +E ++
Sbjct: 179 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 23/222 (10%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN---KFEELFPKFRES 107
+G G FG V LA H + ++A+K++ K+ AK + + E + +
Sbjct: 12 LGEGSFGKVKLAYHTTTG------QKVALKIIN--KKVLAKSDMQGRIEREISYLRLLRH 63
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+ + +I + +++ + D I Q+ K+ + R+ Q+ + H
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR 121
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQWEP 226
EH + + DFG L ++D + + G+PNY APE
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFG-----LSNIMTDGNFLKTSCGSPNYAAPEVISG 176
Query: 227 EVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
++ GP E D W G + ML P+ +S+ ++ ++
Sbjct: 177 KLYAGP---EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 23/222 (10%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN---KFEELFPKFRES 107
+G G FG V LA H + ++A+K++ K+ AK + + E + +
Sbjct: 22 LGEGSFGKVKLAYHTTTG------QKVALKIIN--KKVLAKSDMQGRIEREISYLRLLRH 73
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+ L+ + +I + +++ + D I Q+ K+ + R+ Q+ + H
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR 131
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQWEP 226
EH + + DFG L ++D + + G+PNY APE
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFG-----LSNIMTDGNFLKTSCGSPNYAAPEVISG 186
Query: 227 EVR-GPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
++ GP E D W G + ML P+ +S+ ++ ++
Sbjct: 187 KLYAGP---EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GTP ++APE E P+ E D W G +L+G P+ G + +E ++
Sbjct: 179 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
GTP ++APE E P+ E D W G +L+G P+ G + +E
Sbjct: 179 FGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 16/142 (11%)
Query: 132 GSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXX---XXXXXXXXXEHDQL 188
G + DRI ++ G D R Q+ + LH +G E ++
Sbjct: 101 GELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 189 VLGDFGIPYLLLGRSLSD--SDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIM 246
++ DFG+ + D S ++ GTP Y+APE + P S D W G
Sbjct: 159 MISDFGLS------KMEDPGSVLSTACGTPGYVAPEVL---AQKPYSKAVDCWSIGVIAY 209
Query: 247 EMLTGIQPWFGKSVEEIYHSVV 268
+L G P++ ++ +++ ++
Sbjct: 210 ILLCGYPPFYDENDAKLFEQIL 231
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 20/220 (9%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V L + D+ +AVK L D + F
Sbjct: 3 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGAL--VAVKQLQHSGPDQQRDFQR 60
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFYEGSVGDRIAQQRGGKLPLPDILR 153
+ + L K S + G+S G+ + + M++ Q+ +L +L
Sbjct: 61 EIQIL--KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 118
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y Q+ KG+ L S + + DFG+ LL L +R
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVRE 175
Query: 214 --GTPNY-MAPEQWEPEVRGPISFETDTWGFGCSIMEMLT 250
+P + APE + S ++D W FG + E+ T
Sbjct: 176 PGQSPIFWYAPESLSDNI---FSRQSDVWSFGVVLYELFT 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 24/143 (16%)
Query: 129 FYEGSVGDRIA--QQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHD 186
F G++ + I + +G L IL + + +G+ +H+ G
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPT-------- 163
Query: 187 QLVLGDFGIPYLL-LG-------------RSLSDSDMALRLGTPNYMAPEQWEPEVRGPI 232
++LGD G P L+ LG ++L+ D A + T +Y APE + + I
Sbjct: 164 NILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI 223
Query: 233 SFETDTWGFGCSIMEMLTGIQPW 255
TD W GC + M+ G P+
Sbjct: 224 DERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 20/220 (9%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V L + D+ +AVK L D + F
Sbjct: 4 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGAL--VAVKQLQHSGPDQQRDFQR 61
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFYEGSVGDRIAQQRGGKLPLPDILR 153
+ + L K S + G+S G+ + + M++ Q+ +L +L
Sbjct: 62 EIQIL--KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 119
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y Q+ KG+ L S + + DFG+ LL L +R
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVRE 176
Query: 214 --GTPNY-MAPEQWEPEVRGPISFETDTWGFGCSIMEMLT 250
+P + APE + S ++D W FG + E+ T
Sbjct: 177 PGQSPIFWYAPESLSDNI---FSRQSDVWSFGVVLYELFT 213
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 13/164 (7%)
Query: 109 SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
++ L I G + + M+ G + DRI ++ G D R Q+ + LH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHD 134
Query: 168 IGXXXXX---XXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQW 224
+G E ++++ DFG+ + S+ ++ GTP Y+APE
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV----LSTACGTPGYVAPEVL 190
Query: 225 EPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
+ P S D W G +L G P++ ++ +++ ++
Sbjct: 191 ---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 20/220 (9%)
Query: 41 DPTSLKLKH-----RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVN 95
DPT + +H ++G+G FG V L + D+ +AVK L D + F
Sbjct: 16 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGAL--VAVKQLQHSGPDQQRDFQR 73
Query: 96 KFEELFPKFRESQSVCWLHGISVINGK--ICIAMKFYEGSVGDRIAQQRGGKLPLPDILR 153
+ + L K S + G+S G+ + + M++ Q+ +L +L
Sbjct: 74 EIQIL--KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y Q+ KG+ L S + + DFG+ LL L +R
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVRE 188
Query: 214 --GTPNY-MAPEQWEPEVRGPISFETDTWGFGCSIMEMLT 250
+P + APE + S ++D W FG + E+ T
Sbjct: 189 PGQSPIFWYAPESLSDNI---FSRQSDVWSFGVVLYELFT 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 26/299 (8%)
Query: 26 LRTVV-----ATPTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHE 76
LRT V PTQT +D T++ + +G G FG+V + +
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEIS 75
Query: 77 LAVKML-LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVG 135
+A+K L + E + F+ + + +F + ++ L G+ + + I + E
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 136 DRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGI 195
D ++ + + ++ +A G+ L +G + + DFG
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFG- 192
Query: 196 PYLLLGRSLSDSDMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-G 251
L R L D D T P +W PE F + D W +G + E+++ G
Sbjct: 193 ----LSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+P++ S +++ +V P P P A+ +++ C++ D NRP I+ +
Sbjct: 248 ERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 214 GTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
G+P Y APE ++ + GP E D W G + +++G P+ G++++E+ V+ K
Sbjct: 174 GSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 273 KPCIPSGLPPAVENVI 288
+ IP + EN++
Sbjct: 231 R--IPFYMSTDCENLL 244
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 96/267 (35%), Gaps = 56/267 (20%)
Query: 51 IGRGPFGDVWLATHH---------QSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELF 101
+G+G +G+VW H S D+ + E + + L+ D F+
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDM--- 72
Query: 102 PKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKG 161
R S + WL I GS+ D + +Q L LR + A G
Sbjct: 73 -TSRNSSTQLWL-----------ITHYHEHGSLYDFLQRQ---TLEPHLALRLAVSAACG 117
Query: 162 ISDLH--------SIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYL-LLGRSLSDSDMALR 212
++ LH + Q + D G+ + G D R
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 213 LGTPNYMAPEQWEPEVRGPISFE----TDTWGFGCSIME-----MLTGI----QPWF--- 256
+GT YMAPE + ++R FE TD W FG + E ++ GI +P F
Sbjct: 178 VGTKRYMAPEVLDEQIRTD-CFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDV 236
Query: 257 ---GKSVEEIYHSVVIKKEKPCIPSGL 280
S E++ V + ++ P IP+ L
Sbjct: 237 VPNDPSFEDMKKVVCVDQQTPTIPNRL 263
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 214 GTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
G+P Y APE ++ + GP E D W G + +++G P+ G++++E+ V+ K
Sbjct: 167 GSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 273 KPCIPSGLPPAVENVI 288
+ IP + EN++
Sbjct: 224 R--IPFYMSTDCENLL 237
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 104/266 (39%), Gaps = 33/266 (12%)
Query: 31 ATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCA 90
AT +P I + +L IG+G F V LA H + E+AVK++ D
Sbjct: 4 ATSADEQPHIG--NYRLLKTIGKGNFAKVKLARHILTG------KEVAVKII-----DKT 50
Query: 91 KVFVNKFEELFPKFRESQ-----SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRGG 144
++ + ++LF + R + ++ L + + + M++ G V D + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--G 108
Query: 145 KLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPY-LLLGRS 203
++ + Q+ + H + + DFG G
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 204 LSDSDMALRLGTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEE 262
L G P Y APE ++ + GP E D W G + +++G P+ G++++E
Sbjct: 169 LDAF-----CGAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 263 IYHSVVIKKEKPCIPSGLPPAVENVI 288
+ V+ K + IP + EN++
Sbjct: 221 LRERVLRGKYR--IPFYMSTDCENLL 244
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 114/287 (39%), Gaps = 21/287 (7%)
Query: 33 PTQT----RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKE 87
PTQT +D T++ + +G G FG+V + + +A+K L + E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGYTE 87
Query: 88 DCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLP 147
+ F+ + + +F + ++ L G+ + + I + E D ++ +
Sbjct: 88 KQRRDFLGE-ASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 148 LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDS 207
+ ++ +A G+ L +G + + DFG L R L D
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-----LSRVLED- 199
Query: 208 DMALRLGTPNYMAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEI 263
D T P +W PE F + D W +G + E+++ G +P++ S +++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 264 YHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+V P P P A+ +++ C++ D NRP I+ +
Sbjct: 260 IKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 84 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 139
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 140 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 199
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 200 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNKT 254
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 255 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 313
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 80
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 140
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNKT 195
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 254
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 13/272 (4%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 26 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 81
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 141
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG+ +L + P
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 217 -NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
+MA E + + + ++D W FG + E++T G P+ + +I +++ +
Sbjct: 202 VKWMALESLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRL 257
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
P P + V++ C+ RP ++++
Sbjct: 258 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 214 GTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
G+P Y APE ++ + GP E D W G + +++G P+ G++++E+ V+ +
Sbjct: 172 GSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL--RG 226
Query: 273 KPCIPSGLPPAVENVI 288
K IP + EN++
Sbjct: 227 KYRIPFYMSTDCENLL 242
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 184 EHDQLVLGDFGIPYLLLGRSLSDSD-MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
E ++++ DFG L + D M+ GTP Y+APE + P S D W G
Sbjct: 158 EESKIMISDFG-----LSKMEGKGDVMSTACGTPGYVAPEVL---AQKPYSKAVDCWSIG 209
Query: 243 CSIMEMLTGIQPWFGKSVEEIYHSVV 268
+L G P++ ++ +++ ++
Sbjct: 210 VIAYILLCGYPPFYDENDSKLFEQIL 235
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 30 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 85
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 86 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 145
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 146 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNKT 200
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 201 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 259
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 260 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 293
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 26 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 81
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 141
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNKT 196
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 197 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 255
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 256 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 24 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 79
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 139
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEXXSVHNKT 194
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 253
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 254 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 150 DILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDM 209
D++ +G+Q+A+G+ L E + + DFG L R + D +
Sbjct: 125 DLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFG-----LARDILDREY 179
Query: 210 ALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYH 265
+ P +W E + ++D W FG + E+LT G P+ ++ H
Sbjct: 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH 239
Query: 266 SVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFESSQNAVYND 319
+ + P P P ++ V+ C+E D RP ++ E +A+ D
Sbjct: 240 FLAQGRRLPQ-PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 80
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 140
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNKT 195
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 254
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
L + DFG+ ++ + L M GTP Y APE GP E D W G
Sbjct: 190 LKIADFGLSKIVEHQVL----MKTVCGTPGYCAPEILRGCAYGP---EVDMWSVGIITYI 242
Query: 248 MLTGIQPWF 256
+L G +P++
Sbjct: 243 LLCGFEPFY 251
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 17 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 72
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 73 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 132
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 133 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 187
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 188 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 246
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 247 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 80
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 140
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 195
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 254
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 20 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 75
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 76 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 135
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 136 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 190
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 249
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 250 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 214 GTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
G P Y APE ++ + GP E D W G + +++G P+ G++++E+ V+ K
Sbjct: 175 GAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 273 KPCIPSGLPPAVENVI 288
+ IP + EN++
Sbjct: 232 R--IPFYMSTDCENLL 245
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 23 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 78
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 138
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 139 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNKT 193
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 252
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 253 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 12/162 (7%)
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
++ LH I + + ++ + + + G + + ++ + QL +G++ H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEV 228
E +L L DFG+ +S+ + T Y P+ +
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDI----L 172
Query: 229 RGPISFET--DTWGFGCSIMEMLTGIQPWF-GKSVEEIYHSV 267
G + T D WG GC EM TG +P F G +VEE H +
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATG-RPLFPGSTVEEQLHFI 213
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 135 GDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFG 194
G + + +G KLP+ + + Y +++ +S LHSIG E +QL L D G
Sbjct: 168 GQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLIDLG 226
Query: 195 IPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+ + GTP + APE VR + TD + G ++ + +
Sbjct: 227 AVSRI-------NSFGYLYGTPGFQAPEI----VRTGPTVATDIYTVGRTLAALTLDLPT 275
Query: 255 WFGKSVE 261
G+ V+
Sbjct: 276 RNGRYVD 282
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 15/211 (7%)
Query: 45 LKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFPKF 104
LK ++G+G FG V L + D+ +AVK L D + F + + L K
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGAL--VAVKQLQHSGPDQQRDFQREIQIL--KA 64
Query: 105 RESQSVCWLHGISVINGK--ICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGI 162
S + G+S G+ + + M++ Q+ +L +L Y Q+ KG+
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 163 SDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL--GTPNY-M 219
L S + + DFG+ LL L +R +P +
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDXXVVREPGQSPIFWY 181
Query: 220 APEQWEPEVRGPISFETDTWGFGCSIMEMLT 250
APE + S ++D W FG + E+ T
Sbjct: 182 APESLSDNI---FSRQSDVWSFGVVLYELFT 209
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 23 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 78
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 138
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 139 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 193
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 252
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 253 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 24 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 79
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 139
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 194
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 253
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 254 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 43 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 98
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 99 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 158
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 159 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 213
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 214 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 272
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 273 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 22 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 77
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 137
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 138 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 192
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 251
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 252 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 31/247 (12%)
Query: 30 VATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDC 89
+ + T +P I + +L+ IG+G F V LA H + E+AVK++ D
Sbjct: 4 ITSATDEQPHI--GNYRLQKTIGKGNFAKVKLARHVLTG------REVAVKII-----DK 50
Query: 90 AKVFVNKFEELFPKFRESQ-----SVCWLHGISVINGKICIAMKFYEG-SVGDRIAQQRG 143
++ ++LF + R + ++ L + + + M++ G V D +
Sbjct: 51 TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-- 108
Query: 144 GKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPY-LLLGR 202
G++ + Q+ + H + + DFG +G
Sbjct: 109 GRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN 168
Query: 203 SLSDSDMALRLGTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVE 261
L G+P Y APE ++ + GP E D W G + +++G P+ G++++
Sbjct: 169 KLDTF-----CGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLK 220
Query: 262 EIYHSVV 268
E+ V+
Sbjct: 221 ELRERVL 227
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 44 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 99
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 100 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 159
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 160 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 214
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 215 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 273
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 274 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 150 DILRYGIQ-LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
D R+ Q L KGI LH E + + DFG+ G SD+
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG---SDAL 193
Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFET-DTWGFGCSIMEMLTGIQPWFGKSV 260
++ +GTP +MAPE E R S + D W G ++ + G P+ + +
Sbjct: 194 LSNTVGTPAFMAPESLS-ETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 17/274 (6%)
Query: 40 IDPTSL--KLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF 97
I P+SL IGRG FG V+ H D+ + AVK L + D +V
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVY---HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLT 80
Query: 98 EELFPKFRESQSVCWLHGISVIN-GKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI 156
E + K +V L GI + + G + + + + + + D++ +G+
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 140
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+AKG+ L S E + + DFG L R + D +
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG-----LARDMYDKEYYSVHNKT 195
Query: 217 NYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKE 272
P +W E + ++D W FG + E++T G P+ + +I +++
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGR 254
Query: 273 KPCIPSGLPPAVENVIIGCFEYDLRNRPLMADIL 306
+ P P + V++ C+ RP ++++
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 20/235 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK--MLLPLKEDCA--KVFVN 95
I P +L +G+G +G V+ A+ + +K M++ +D A K N
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 96 KFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRY 154
EE+ F + G GK+ + +++ G G+ Q +R G Y
Sbjct: 74 ILEEVKHPFIVDLIYAFQTG-----GKLYLILEYLSG--GELFMQLEREGIFMEDTACFY 126
Query: 155 GIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL- 213
+++ + LH G + L DFG L S+ D +
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG----LCKESIHDGTVTHTFC 182
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT YMAPE +R + D W G + +MLTG P+ G++ ++ ++
Sbjct: 183 GTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 20/235 (8%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK--MLLPLKEDCA--KVFVN 95
I P +L +G+G +G V+ A+ + +K M++ +D A K N
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 96 KFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQ-QRGGKLPLPDILRY 154
EE+ F + G GK+ + +++ G G+ Q +R G Y
Sbjct: 74 ILEEVKHPFIVDLIYAFQTG-----GKLYLILEYLSG--GELFMQLEREGIFMEDTACFY 126
Query: 155 GIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL- 213
+++ + LH G + L DFG L S+ D +
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG----LCKESIHDGTVTHXFC 182
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT YMAPE +R + D W G + +MLTG P+ G++ ++ ++
Sbjct: 183 GTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 110/276 (39%), Gaps = 17/276 (6%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML-LPLKEDCAKVFVNKFE 98
+D T++ + +G G FG+V + + +A+K L + E + F+ +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGYTEKQRRDFLGE-A 68
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
+ +F + ++ L G+ + + I + E D ++ + + ++ +
Sbjct: 69 SIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 159 AKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNY 218
A G+ L +G + + DFG L R L D D T
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-----LSRVLED-DPEAAYTTRGG 181
Query: 219 MAPEQW-EPEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKP 274
P +W PE F + D W +G + E+++ G +P++ S +++ +V P
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 241
Query: 275 CIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ D NRP I+ +
Sbjct: 242 P-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L + D++ + Q+++G+ L + E ++ + DFG L R +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFG-----LSRDVY 201
Query: 206 DSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
+ D ++ P +W E + ++D W FG + E++T G P+ G E
Sbjct: 202 EEDSXVKRSQGR--IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
+++ ++ + P + +++ C++ + RP+ ADI E
Sbjct: 260 RLFN-LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 125 IAMKFYEGSVGDRIAQQRGGKLPLPDILRYGI-QLAKGISDLHSIGXXXXXXXXXXXXXX 183
+ M F +G + ++ G+ D +++ + Q+ KG+ +H+ G
Sbjct: 107 LVMPFMGTDLGKLMKHEKLGE----DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN 162
Query: 184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGC 243
E +L + DFG L R +DS+M + T Y APE +R + D W GC
Sbjct: 163 EDCELKILDFG-----LARQ-ADSEMXGXVVTRWYRAPEVILNWMR--YTQTVDIWSVGC 214
Query: 244 SIMEMLTG 251
+ EM+TG
Sbjct: 215 IMAEMITG 222
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 51 IGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
+G G FG V LA D + ++AVKML K D + ++ E+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMIGK 92
Query: 107 SQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQR--------------GGKLPLPDI 151
+++ L G +G + + +++ +G++ + + +R +L D+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+ Q+A+G+ L S E + + + DFG L R + D
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIHHIDXXK 207
Query: 212 RLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
+ T N P +W E + ++D W FG + E+ T G P+ G VEE++
Sbjct: 208 K--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 33/243 (13%)
Query: 45 LKLKHRIGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EEL 100
L L +G G FG V LA D + ++AVKML K D + ++ E+
Sbjct: 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEM 127
Query: 101 FPKFRESQSVCWLHGISVINGKICIAMKF-YEGSVGDRIAQQR--------------GGK 145
+ +++ L G +G + + +++ +G++ + + +R +
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L D++ Q+A+G+ L S E + + + DFG L R +
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIH 242
Query: 206 DSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
D + T N P +W E + ++D W FG + E+ T G P+ G VE
Sbjct: 243 HIDYYKK--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300
Query: 262 EIY 264
E++
Sbjct: 301 ELF 303
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 51 IGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
+G G FG V LA D + ++AVKML K D + ++ E+ +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMIGK 84
Query: 107 SQSVCWLHGISVINGKICIAMKF-YEGSVGDRIAQQR--------------GGKLPLPDI 151
+++ L G +G + + +++ +G++ + + +R +L D+
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+ Q+A+G+ L S E + + + DFG L R + D
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIHHIDYYK 199
Query: 212 RLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
+ T N P +W E + ++D W FG + E+ T G P+ G VEE++
Sbjct: 200 K--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 57/173 (32%), Gaps = 22/173 (12%)
Query: 149 PDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
P + Y Q+ G+ LH + + + D G+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHS 266
A GTP +MAPE E F D + G ++ EM+ P+ G+ VE
Sbjct: 349 YA---GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYD--------------LRNRPLMADI 305
+ ++ P PA ++ + D LR PL DI
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 57/173 (32%), Gaps = 22/173 (12%)
Query: 149 PDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
P + Y Q+ G+ LH + + + D G+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHS 266
A GTP +MAPE E F D + G ++ EM+ P+ G+ VE
Sbjct: 349 YA---GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYD--------------LRNRPLMADI 305
+ ++ P PA ++ + D LR PL DI
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 51 IGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
+G G FG V LA D + ++AVKML K D + ++ E+ +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMIGK 85
Query: 107 SQSVCWLHGISVINGKICIAMKF-YEGSVGDRIAQQR--------------GGKLPLPDI 151
+++ L G +G + + +++ +G++ + + +R +L D+
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+ Q+A+G+ L S E + + + DFG L R + D
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIHHIDYYK 200
Query: 212 RLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
+ T N P +W E + ++D W FG + E+ T G P+ G VEE++
Sbjct: 201 K--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 51 IGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
+G G FG V LA D + ++AVKML K D + ++ E+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMIGK 92
Query: 107 SQSVCWLHGISVINGKICIAMKFY-EGSVGDRIAQQR--------------GGKLPLPDI 151
+++ L G +G + + +++ +G++ + + +R +L D+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+ Q+A+G+ L S E + + + DFG L R + D
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIHHIDYYK 207
Query: 212 RLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
+ T N P +W E + ++D W FG + E+ T G P+ G VEE++
Sbjct: 208 K--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L + D++ + Q+++G+ L + E ++ + DFG L R +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG-----LSRDVY 201
Query: 206 DSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
+ D ++ P +W E + ++D W FG + E++T G P+ G E
Sbjct: 202 EEDSXVKRSQGR--IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
+++ ++ + P + +++ C++ + RP+ ADI E
Sbjct: 260 RLFN-LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 51 IGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
+G G FG V LA D + ++AVKML K D + ++ E+ +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMIGK 81
Query: 107 SQSVCWLHGISVINGKICIAMKF-YEGSVGDRIAQQR--------------GGKLPLPDI 151
+++ L G +G + + +++ +G++ + + +R +L D+
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+ Q+A+G+ L S E + + + DFG L R + D
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIHHIDYYK 196
Query: 212 RLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
+ T N P +W E + ++D W FG + E+ T G P+ G VEE++
Sbjct: 197 K--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 214 GTPNYMAPEQWE-PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKE 272
G P Y APE ++ + GP E D W G + +++G P+ G++++E+ V+ K
Sbjct: 174 GAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 273 KPCIPSGLPPAVENVI 288
+ IP EN++
Sbjct: 231 R--IPFYXSTDCENLL 244
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 57/173 (32%), Gaps = 22/173 (12%)
Query: 149 PDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
P + Y Q+ G+ LH + + + D G+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHS 266
A GTP +MAPE E F D + G ++ EM+ P+ G+ VE
Sbjct: 349 YA---GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYD--------------LRNRPLMADI 305
+ ++ P PA ++ + D LR PL DI
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ KG+ +HS G E +L + DFG L R +D++M + T
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG-----LARH-ADAEMTGYVVTR 205
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
Y APE W + D W GC + EMLTG + GK
Sbjct: 206 WYRAPEVILSW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ KG+ +HS G E +L + DFG L R +D++M + T
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG-----LARH-ADAEMTGYVVTR 187
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
Y APE W + D W GC + EMLTG + GK
Sbjct: 188 WYRAPEVILSW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 16/176 (9%)
Query: 139 AQQRGGKLP--LPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIP 196
A+ G+ P L ++++ ++A G++ L++ + +GDFG
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-- 175
Query: 197 YLLLGRSLSDSDMALRLGT----PNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLT-G 251
+ R + ++ + G +MAPE + G + +D W FG + E+ +
Sbjct: 176 ---MTRDIYETAYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLA 229
Query: 252 IQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILH 307
QP+ G S E++ V+ P P V +++ C++++ + RP +I++
Sbjct: 230 EQPYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 57/173 (32%), Gaps = 22/173 (12%)
Query: 149 PDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSD 208
P + Y Q+ G+ LH + + + D G+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW--FGKSVEEIYHS 266
A GTP +MAPE E F D + G ++ EM+ P+ G+ VE
Sbjct: 349 YA---GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 267 VVIKKEKPCIPSGLPPAVENVIIGCFEYD--------------LRNRPLMADI 305
+ ++ P PA ++ + D LR PL DI
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
M RLGT Y+APE +R + D W G + +L G P+ G++ +EI V
Sbjct: 180 MKERLGTAYYIAPEV----LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 51 IGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
+G G FG V LA D + ++AVKML K D + ++ E+ +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMIGK 77
Query: 107 SQSVCWLHGISVINGKICIAMKF-YEGSVGDRIAQQR--------------GGKLPLPDI 151
+++ L G +G + + +++ +G++ + + +R +L D+
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+ Q+A+G+ L S E + + + DFG L R + D
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIHHIDYYK 192
Query: 212 RLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
+ T N P +W E + ++D W FG + E+ T G P+ G VEE++
Sbjct: 193 K--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
+GT Y APE +RG I+ ++D + FG ++E++TG+
Sbjct: 187 VGTTAYXAPEA----LRGEITPKSDIYSFGVVLLEIITGL 222
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L + D++ + Q+++G+ L + E ++ + DFG L R +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG-----LSRDVY 201
Query: 206 DSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
+ D ++ P +W E + ++D W FG + E++T G P+ G E
Sbjct: 202 EEDSYVKRSQGR--IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 262 EIYHSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFES 311
+++ ++ + P + +++ C++ + RP+ ADI E
Sbjct: 260 RLFN-LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 51 IGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
+G G FG V LA D + ++AVKML K D + ++ E+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMIGK 92
Query: 107 SQSVCWLHGISVINGKICIAMKF-YEGSVGDRIAQQR--------------GGKLPLPDI 151
+++ L G +G + + +++ +G++ + + +R +L D+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+ Q+A+G+ L S E + + + DFG L R + D
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIHHIDYYK 207
Query: 212 RLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
+ T N P +W E + ++D W FG + E+ T G P+ G VEE++
Sbjct: 208 K--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
M RLGT Y+APE +R + D W G + +L G P+ G++ +EI V
Sbjct: 163 MKERLGTAYYIAPEV----LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 39/232 (16%)
Query: 38 PWIDPT-----SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKV 92
P DPT LK +G G FG V L + + D E +AVK LK DC
Sbjct: 4 PASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEM--VAVK---ALKADCGPQ 58
Query: 93 FVNKFEELFPKFRESQSVCWLHGISVINGKIC----------IAMKFYE-GSVGDRIAQQ 141
+ +++ R L+ +I K C + M++ GS+ D + +
Sbjct: 59 HRSGWKQEIDILRT------LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH 112
Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLV-LGDFGIPYLLL 200
G L +L + Q+ +G++ LHS ++D+LV +GDFG L
Sbjct: 113 SIG---LAQLLLFAQQICEGMAYLHS-QHYIHRNLAARNVLLDNDRLVKIGDFG-----L 163
Query: 201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLT 250
+++ + R+ + PE F +D W FG ++ E+LT
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF-V 195
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE S +D W GC I +++ G+ P+ + I+ ++
Sbjct: 196 GTAQYVSPELL---TEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
GT +Y+ PE E + + D W G E+L G P+ S E Y +V K
Sbjct: 183 GTLDYLPPEMIEGRMHNE---KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLK 239
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNRPLMADI 305
P+ +P +++I ++ R +A +
Sbjct: 240 --FPASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGC 243
E + V+GDFG+ L+ + A+R GT ++APE G S +TD +G+G
Sbjct: 177 EEFEAVVGDFGLAKLMDYKDXH-VXXAVR-GTIGHIAPEYLST---GKSSEKTDVFGYGV 231
Query: 244 SIMEMLTG 251
++E++TG
Sbjct: 232 MLLELITG 239
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 19/219 (8%)
Query: 39 WIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFE 98
W + +L ++GRG + +V+ A + + + ++ VK+L P+K++ K + E
Sbjct: 33 WGNQDDYQLVRKLGRGKYSEVFEAINITNNE------KVVVKILKPVKKNKIKREIKILE 86
Query: 99 ELFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQL 158
L R ++ L I A+ F V + +Q L DI Y ++
Sbjct: 87 NL----RGGPNIITLADIVKDPVSRTPALVF--EHVNNTDFKQLYQTLTDYDIRFYMYEI 140
Query: 159 AKGISDLHSIGXXXXXXX-XXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPN 217
K + HS+G EH +L L D+G+ + +R+ +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRY 196
Query: 218 YMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF 256
+ PE + D W GC + M+ +P+F
Sbjct: 197 FKGPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 11/206 (5%)
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSI 168
++ L G+ + + I ++ E D ++ G+ + ++ ++ G+ L +
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 169 GXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWE-PE 227
G + + DFG L R L D D T P +W PE
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFG-----LSRVLED-DPEAAYTTRGGKIPIRWTAPE 197
Query: 228 VRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAV 284
F + D W +G + E+++ G +P++ + +++ +V P P P A+
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPS-PMDCPAAL 256
Query: 285 ENVIIGCFEYDLRNRPLMADILHAFE 310
+++ C++ + +RP +I++ +
Sbjct: 257 YQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S A +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF-V 193
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 194 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 68/189 (35%), Gaps = 40/189 (21%)
Query: 151 ILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGR-SLSDSDM 209
+ +Y Q+ GI HS + + L DFG L + D ++
Sbjct: 126 VQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV 185
Query: 210 ALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWF--GKSVEEIYHSV 267
A R Y APE +V+ + D W GC + EM G +P F ++++YH +
Sbjct: 186 ATRW----YRAPELLVGDVKYGKA--VDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIM 238
Query: 268 V--------------------------IKKEKPCIPSGLPPAVENVI---IGCFEYDLRN 298
+ IK+ +P + P E VI C D
Sbjct: 239 MCLGNLIPRHQELFNKNPVFAGVRLPEIKEREP-LERRYPKLSEVVIDLAKKCLHIDPDK 297
Query: 299 RPLMADILH 307
RP A++LH
Sbjct: 298 RPFCAELLH 306
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 21/218 (9%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL-FPKFRESQ 108
+IG G +G V+ A + ++ HE+ + L +D V + E+ K + +
Sbjct: 9 KIGEGTYGTVFKAKNRET-------HEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHS 167
++ LH + + K+ + +F + + + G L P+I++ + QL KG+ HS
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLK-KYFDSCNGDLD-PEIVKSFLFQLLKGLGFCHS 119
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIP--YLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
+ +L L DFG+ + + R S + L P+ + +
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL- 178
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEE 262
S D W GC E+ +P F G V++
Sbjct: 179 ------YSTSIDMWSAGCIFAELANAARPLFPGNDVDD 210
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 6/146 (4%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 198
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++ K +
Sbjct: 199 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLE 253
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNR 299
P+ P +++ D R
Sbjct: 254 YDFPAAFFPKARDLVEKLLVLDATKR 279
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEML 249
L DFG+ + G + A GTP Y++PE E G D W G + +L
Sbjct: 147 LADFGLAIEVQGDQQAWFGFA---GTPGYLSPEVLRKEAYGK---PVDIWACGVILYILL 200
Query: 250 TGIQPWFGKSVEEIYHSV 267
G P++ + ++Y +
Sbjct: 201 VGYPPFWDEDQHKLYQQI 218
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP---------WFGKSVEEI 263
+GT Y+APE E + + D W FG E +TG +P W GK E+
Sbjct: 185 VGTLQYLAPELLE---QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKS 241
Query: 264 YHSVVI 269
+V+
Sbjct: 242 NEHIVV 247
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIME 247
L DFG+ + D + GTP +MAPE E P ++ D W G +++E
Sbjct: 149 LADFGVSAKNTRTXIQRRDSFI--GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 206
Query: 248 MLTGIQP 254
M I+P
Sbjct: 207 M-AEIEP 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Query: 213 LGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQP---------WFGKSVEEI 263
+GT Y+APE E + + D W FG E +TG +P W GK E+
Sbjct: 184 VGTLQYLAPELLE---QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKS 240
Query: 264 YHSVVI 269
+V+
Sbjct: 241 NEHIVV 246
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L L + + QL +G+ +HS E+ +L +GDFG + R L
Sbjct: 155 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFG-----MARGLC 209
Query: 206 DSDMALRLGTPNYMAPEQWE-PEVRGPISFET---DTWGFGCSIMEMLTGIQPWFGKS 259
S + Y+A + PE+ + T D W GC EML Q + GK+
Sbjct: 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 87/235 (37%), Gaps = 43/235 (18%)
Query: 38 PWIDPTSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
P+ D S K +IG+G FG+V+ A H ++ ++A+K KV +
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTG------QKVALK----------KVLMEN 55
Query: 97 FEELFP--KFRESQSVCWLHGISVIN----------------GKICIAMKFYEGSVGDRI 138
+E FP RE + + L +V+N G I + F E + +
Sbjct: 56 EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL 115
Query: 139 AQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYL 198
+ K L +I R L G+ +H L L DFG+
Sbjct: 116 SNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 199 L-LGRSLSDSDMALRLGTPNYMAPEQW--EPEVRGPISFETDTWGFGCSIMEMLT 250
L ++ + R+ T Y PE E + PI D WG GC + EM T
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPI----DLWGAGCIMAEMWT 225
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 39/232 (16%)
Query: 38 PWIDPT-----SLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKV 92
P DPT LK +G G FG V L + + D E +AVK LK DC
Sbjct: 4 PASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEM--VAVK---ALKADCGPQ 58
Query: 93 FVNKFEELFPKFRESQSVCWLHGISVINGKIC----------IAMKFYE-GSVGDRIAQQ 141
+ +++ R L+ +I K C + M++ GS+ D + +
Sbjct: 59 HRSGWKQEIDILRT------LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH 112
Query: 142 RGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLV-LGDFGIPYLLL 200
G L +L + Q+ +G++ LH+ ++D+LV +GDFG L
Sbjct: 113 SIG---LAQLLLFAQQICEGMAYLHA-QHYIHRNLAARNVLLDNDRLVKIGDFG-----L 163
Query: 201 GRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISF--ETDTWGFGCSIMEMLT 250
+++ + R+ + PE F +D W FG ++ E+LT
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
QL +G+ +HS G E +L + DFG L R +D +M + T
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFG-----LARQ-ADEEMTGYVATR 192
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+L G
Sbjct: 193 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLQG 225
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
QL +G+ +HS G E +L + DFG L R +D +M + T
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFG-----LARQ-ADEEMTGYVATR 192
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+L G
Sbjct: 193 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLQG 225
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 90/237 (37%), Gaps = 33/237 (13%)
Query: 51 IGRGPFGDVWLATH-HQSADDFDEYHELAVKMLLPLKEDCAKVFVNKF---EELFPKFRE 106
+G G FG V LA D + ++AVKML K D + ++ E+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMIGK 92
Query: 107 SQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRG---------------GKLPLPDI 151
+++ L G +G + + +++ Q R +L D+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMAL 211
+ Q+A+G+ L S E + + + DFG L R + D
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-----LARDIHHIDYYK 207
Query: 212 RLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIY 264
+ T N P +W E + ++D W FG + E+ T G P+ G VEE++
Sbjct: 208 K--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 87/235 (37%), Gaps = 43/235 (18%)
Query: 38 PWIDPTSLKLK-HRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNK 96
P+ D S K +IG+G FG+V+ A H ++ ++A+K KV +
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTG------QKVALK----------KVLMEN 55
Query: 97 FEELFP--KFRESQSVCWLHGISVIN----------------GKICIAMKFYEGSVGDRI 138
+E FP RE + + L +V+N G I + F E + +
Sbjct: 56 EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL 115
Query: 139 AQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYL 198
+ K L +I R L G+ +H L L DFG+
Sbjct: 116 SNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 199 L-LGRSLSDSDMALRLGTPNYMAPEQW--EPEVRGPISFETDTWGFGCSIMEMLT 250
L ++ + R+ T Y PE E + PI D WG GC + EM T
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPI----DLWGAGCIMAEMWT 225
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 14/161 (8%)
Query: 108 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLP----LPDILRYGIQLAKGIS 163
+++ L+ + K+ + +F + + + + G P L + + QL +G++
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 164 DLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQ 223
H + QL LGDFG+ + + + + T Y AP+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF---GIPVNTFSSEVVTLWYRAPDV 179
Query: 224 WEPEVRGPISFET--DTWGFGCSIMEMLTGIQPWFGKSVEE 262
+ G ++ T D W GC + EM+TG +P F + +E
Sbjct: 180 ----LMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDE 215
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 190 LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIME 247
L DFG+ R++ D + GTP +MAPE E P ++ D W G +++E
Sbjct: 176 LADFGVS-AKNTRTIQRRDSFI--GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
Query: 248 MLTGIQP 254
M I+P
Sbjct: 233 M-AEIEP 238
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 213 LGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+GTP +MAPE E P ++ D W G +++EM I+P
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM-AEIEP 238
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 213 LGTPNYMAPE--QWEPEVRGPISFETDTWGFGCSIMEMLTGIQP 254
+GTP +MAPE E P ++ D W G +++EM I+P
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM-AEIEP 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 196
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 197 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 193
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 194 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 172
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 173 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 224
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 142 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 200
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 201 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 252
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 196 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 196 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 170
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 171 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 222
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 171
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 172 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 173
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 174 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 225
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 193
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 194 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 193
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 194 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
L L + + QL +G+ +HS E+ +L +GDFG + R L
Sbjct: 156 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFG-----MARGLC 210
Query: 206 DSDMALRLGTPNYMAPEQWE-PEVRGPISFET---DTWGFGCSIMEMLTGIQPWFGKS 259
S + Y+A + PE+ + T D W GC EML Q + GK+
Sbjct: 211 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 268
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 196 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF-V 196
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 197 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 177
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 178 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 82/222 (36%), Gaps = 42/222 (18%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEELFP--KFRES 107
+IG+G FG+V+ A H ++ ++A+K KV + +E FP RE
Sbjct: 24 KIGQGTFGEVFKARHRKTG------QKVALK----------KVLMENEKEGFPITALREI 67
Query: 108 QSVCWLHGISVIN----------------GKICIAMKFYEGSVGDRIAQQRGGKLPLPDI 151
+ + L +V+N G I + F E + ++ K L +I
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEI 126
Query: 152 LRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLL-LGRSLSDSDMA 210
R L G+ +H L L DFG+ L ++ +
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 211 LRLGTPNYMAPEQW--EPEVRGPISFETDTWGFGCSIMEMLT 250
R+ T Y PE E + PI D WG GC + EM T
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPI----DLWGAGCIMAEMWT 224
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
QL +G+ +HS G E +L + DFG L R +D +M + T
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG-----LARQ-ADEEMTGYVATR 184
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+L G
Sbjct: 185 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLQG 217
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 6/146 (4%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
GT Y++PE + S D W GC I +++ G+ P F E + + +IK E
Sbjct: 196 GTAQYVSPELLTEKSAXKSS---DLWALGCIIYQLVAGLPP-FRAGNEGLIFAKIIKLEY 251
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNR 299
P P +++ D R
Sbjct: 252 D-FPEKFFPKARDLVEKLLVLDATKR 276
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQ 108
+G G FG V H ++A+K++ + + A++ +N +++ K +E++
Sbjct: 27 LGEGTFGKVVECLDHARGKS-----QVALKIIRNVGKYREAARLEINVLKKIKEKDKENK 81
Query: 109 SVCWLHGISV-INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+C L +G +CIA + + + + + PLP + QL + LH
Sbjct: 82 FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 192
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 193 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 6/146 (4%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEK 273
GT Y++PE + S D W GC I +++ G+ P F E + + +IK E
Sbjct: 196 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP-FRAGNEGLIFAKIIKLEY 251
Query: 274 PCIPSGLPPAVENVIIGCFEYDLRNR 299
P P +++ D R
Sbjct: 252 D-FPEKFFPKARDLVEKLLVLDATKR 276
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 188 LVLGDFGIPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEP--------EVRGPISFET 236
L L DFGI + + S DS ++GT NYM PE + + + IS ++
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDS----QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
D W GC + M G P F + + +I H+++ + P +++V+ C +
Sbjct: 249 DVWSLGCILYYMTYGKTP-FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR 307
Query: 295 DLRNRPLMADIL 306
D + R + ++L
Sbjct: 308 DPKQRISIPELL 319
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQ 108
+G G FG V H ++A+K++ + + A++ +N +++ K +E++
Sbjct: 59 LGEGTFGKVVECLDHARGKS-----QVALKIIRNVGKYREAARLEINVLKKIKEKDKENK 113
Query: 109 SVCWLHGISV-INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLH 166
+C L +G +CIA + + + + + PLP + QL + LH
Sbjct: 114 FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 172
>pdb|3HFR|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes
pdb|3HFR|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes
pdb|3IST|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Succinic Acid
pdb|3IST|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Succinic Acid
pdb|3ISV|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Acetate Ion
pdb|3ISV|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Acetate Ion
Length = 269
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 13/84 (15%)
Query: 254 PWFGKSVEE-IYHSVVIKKEKPCIPSGLPP----AVENVIIGCFEYDLRNRPLMADILHA 308
P F VE Y S + KK + L P ++ VI+GC Y PL+ I+
Sbjct: 147 PKFVSVVESGEYKSAIAKK---VVAESLLPLKSTKIDTVILGCTHY-----PLLKPIIEN 198
Query: 309 FESSQNAVYNDGEWTGLGSRALTD 332
F AV N GE T AL D
Sbjct: 199 FXGDGVAVINSGEETASEVSALLD 222
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 13/145 (8%)
Query: 116 ISVINGKICIAM--KFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXX 173
I VI+ + C+ + +F E + + + + G L I Y QL +G++ H
Sbjct: 85 IDVIHSERCLTLVFEFMEKDLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 174 XXXXXXXXXXEHDQLVLGDFGIP--YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGP 231
L L DFG+ + + RS + + L P+ + +
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK-------K 196
Query: 232 ISFETDTWGFGCSIMEMLTGIQPWF 256
S D W GC EM+TG +P F
Sbjct: 197 YSTSVDIWSIGCIFAEMITG-KPLF 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 154 YGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRL 213
Y ++ + LH G E + + DFG +L S + +
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF-V 192
Query: 214 GTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVV 268
GT Y++PE + S D W GC I +++ G+ P+ + I+ ++
Sbjct: 193 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 51 IGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPL--KEDCAKVFVNKFEELFPKFRESQ 108
+G G FG V H ++A+K++ + + A++ +N +++ K +E++
Sbjct: 36 LGEGTFGKVVECLDHARGKS-----QVALKIIRNVGKYREAARLEINVLKKIKEKDKENK 90
Query: 109 SVCWLHGISV-INGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHS 167
+C L +G +CIA + + + + + PLP + QL + LH
Sbjct: 91 FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 150
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +MA + T
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMAGFVATR 182
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 183 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 13/145 (8%)
Query: 116 ISVINGKICIAM--KFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXX 173
I VI+ + C+ + +F E + + + + G L I Y QL +G++ H
Sbjct: 85 IDVIHSERCLTLVFEFMEKDLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 174 XXXXXXXXXXEHDQLVLGDFGIP--YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGP 231
L L DFG+ + + RS + + L P+ + +
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK-------K 196
Query: 232 ISFETDTWGFGCSIMEMLTGIQPWF 256
S D W GC EM+TG +P F
Sbjct: 197 YSTSVDIWSIGCIFAEMITG-KPLF 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 188 LVLGDFGIPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEP--------EVRGPISFET 236
L L DFGI + + S DS ++GT NYM PE + + + IS ++
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDS----QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
D W GC + M G P F + + +I H+++ + P +++V+ C +
Sbjct: 249 DVWSLGCILYYMTYGKTP-FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR 307
Query: 295 DLRNRPLMADIL 306
D + R + ++L
Sbjct: 308 DPKQRISIPELL 319
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 184 EHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGC 243
E + V+GDFG+ L+ + A+R G ++APE G S +TD +G+G
Sbjct: 169 EEFEAVVGDFGLAKLMDYKD-XHVXXAVR-GXIGHIAPEYLST---GKSSEKTDVFGYGV 223
Query: 244 SIMEMLTG 251
++E++TG
Sbjct: 224 MLLELITG 231
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 184
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ G + G + ++ V+ + P
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRP---------LMADILHAFESSQNAVYNDGEWT 323
C L P V + NRP L D+L +S NA+
Sbjct: 245 CPEFMKKLQPTVRTYV--------ENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARD 296
Query: 324 GLGSRALTDTS 334
L + D S
Sbjct: 297 LLSKMLVIDAS 307
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 188 LVLGDFGIPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEP--------EVRGPISFET 236
L L DFGI + + S DS ++GT NYM PE + + + IS ++
Sbjct: 146 LKLIDFGIANQMQPDTTSVVKDS----QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
D W GC + M G P F + + +I H+++ + P +++V+ C +
Sbjct: 202 DVWSLGCILYYMTYGKTP-FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR 260
Query: 295 DLRNRPLMADIL 306
D + R + ++L
Sbjct: 261 DPKQRISIPELL 272
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 162 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 215
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 216 WYRAPEIMLNW-----MHYNMTVDIWSVGCIMAELLTG 248
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +MA + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMAGFVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +MA + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMAGFVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 38/248 (15%)
Query: 22 DPDHLRTVVATPTQT--RPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAV 79
DP+ + V+A+ +T + I T+ K+ IG G FG V+ A E E+A+
Sbjct: 20 DPNKVIKVLASDGKTGEQREIAYTNCKV---IGNGSFGVVFQA-------KLVESDEVAI 69
Query: 80 KMLLPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGK------ICIAMKFYEGS 133
K +L +D K F N+ ++ + + +V L NG + + +++ +
Sbjct: 70 KKVL---QD--KRFKNRELQIM-RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPET 123
Query: 134 V--GDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHD-QLVL 190
V R + +P+ I Y QL + ++ +HSIG L L
Sbjct: 124 VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL 183
Query: 191 GDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFET--DTWGFGCSIMEM 248
DFG +L+ + S + R Y APE + G ++ T D W GC + E+
Sbjct: 184 IDFGSAKILIAGEPNVSXICSRY----YRAPEL----IFGATNYTTNIDIWSTGCVMAEL 235
Query: 249 LTGIQPWF 256
+ G QP F
Sbjct: 236 MQG-QPLF 242
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG-----LARH-TDDEMTGYVATR 188
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 189 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG-----LARH-TDDEMTGYVATR 192
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 193 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 188 LVLGDFGIPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEP--------EVRGPISFET 236
L L DFGI + + S DS ++GT NYM PE + + + IS ++
Sbjct: 165 LKLIDFGIANQMQPDTTSVVKDS----QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
D W GC + M G P F + + +I H+++ + P +++V+ C +
Sbjct: 221 DVWSLGCILYYMTYGKTP-FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR 279
Query: 295 DLRNRPLMADIL 306
D + R + ++L
Sbjct: 280 DPKQRISIPELL 291
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 192 DFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG 251
DFG+ D + RLGT Y+APE ++ + + D W G + +L G
Sbjct: 192 DFGLSSFFS----KDYKLRDRLGTAYYIAPEV----LKKKYNEKCDVWSCGVIMYILLCG 243
Query: 252 IQPWFGKSVEEIYHSV 267
P+ G++ ++I V
Sbjct: 244 YPPFGGQNDQDIIKKV 259
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG-----LARH-TDDEMTGYVATR 191
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 192 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 224
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG-----LARH-TDDEMTGYVATR 191
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 192 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 20/163 (12%)
Query: 146 LPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLS 205
+PL +L++ + +A G+ L + + + + DFG L + +
Sbjct: 144 IPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFG-----LSKKIY 198
Query: 206 DSDMALRLGTPNYMAPEQW---EPEVRGPISFETDTWGFGCSIMEMLT-GIQPWFGKSVE 261
D R G M P +W E + ++D W FG ++ E+ T G+ P+ G
Sbjct: 199 SGD-YYRQGRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH 256
Query: 262 EIY----HSVVIKKEKPCIPSGLPPAVENVIIGCFEYDLRNRP 300
E+Y H +K+ + C+ + ++ C+ D +RP
Sbjct: 257 EMYDYLLHGHRLKQPEDCLDE-----LYEIMYSCWRTDPLDRP 294
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 188 LVLGDFGIPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEP--------EVRGPISFET 236
L L DFGI + + S DS ++GT NYM PE + + + IS ++
Sbjct: 149 LKLIDFGIANQMQPDTTSVVKDS----QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 204
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
D W GC + M G P F + + +I H+++ + P +++V+ C +
Sbjct: 205 DVWSLGCILYYMTYGKTP-FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR 263
Query: 295 DLRNRPLMADIL 306
D + R + ++L
Sbjct: 264 DPKQRISIPELL 275
>pdb|3FC3|A Chain A, Crystal Structure Of The Beta-Beta-Alpha-Me Type Ii
Restriction Endonuclease Hpy99i
pdb|3FC3|B Chain B, Crystal Structure Of The Beta-Beta-Alpha-Me Type Ii
Restriction Endonuclease Hpy99i
pdb|3GOX|A Chain A, Crystal Structure Of The Beta-Beta-Alpha-Me Type Ii
Restriction Endonuclease Hpy99i In The Absence Of Edta
pdb|3GOX|B Chain B, Crystal Structure Of The Beta-Beta-Alpha-Me Type Ii
Restriction Endonuclease Hpy99i In The Absence Of Edta
Length = 200
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 412 FGLAAGDWVSLKDE--NSRHSSVGVLHSVQRDGSVSVGFIGLETLWRGNYSEIQMAKAYY 469
F L D+V K++ N +SVGV+ +V S V FIGL L R ++SE++ Y
Sbjct: 10 FMLKNDDFVIAKNQLGNIVPNSVGVIRAVN-GKSAMVLFIGLNELKRVDFSELEAIDIYR 68
Query: 470 VGQ 472
G+
Sbjct: 69 TGK 71
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 188 LVLGDFGIPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEP--------EVRGPISFET 236
L L DFGI + + S DS ++GT NYM PE + + + IS ++
Sbjct: 145 LKLIDFGIANQMQPDTTSVVKDS----QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 200
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
D W GC + M G P F + + +I H+++ + P +++V+ C +
Sbjct: 201 DVWSLGCILYYMTYGKTP-FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR 259
Query: 295 DLRNRPLMADIL 306
D + R + ++L
Sbjct: 260 DPKQRISIPELL 271
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG-----LARH-TDDEMTGYVATR 197
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 198 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 230
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFMM----TP 177
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 238 CPEFMKKLQPTVRNYV--------ENRPKYA 260
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE + + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNAMH--YNQTVDIWSVGCIMAELLTG 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 14/131 (10%)
Query: 128 KFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXX--XXXXXXXEH 185
+ ++ VG++ ++ KL Y Q+ + LH G E
Sbjct: 239 ELFDKVVGNKRLKEATCKL-------YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 291
Query: 186 DQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCS 244
D L+ + DFG +L SL M GTP Y+APE + D W G
Sbjct: 292 DCLIKITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 245 IMEMLTGIQPW 255
+ L+G P+
Sbjct: 348 LFICLSGYPPF 358
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
L L DFG L R M ++GTP Y++P+ E + GP E D W G +
Sbjct: 148 LKLIDFG----LAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGP---ECDEWSAGVMMYV 199
Query: 248 MLTGIQPWFGKSVEEI 263
+L G P+ + E+
Sbjct: 200 LLCGYPPFSAPTDXEV 215
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 14/131 (10%)
Query: 128 KFYEGSVGDRIAQQRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXX--XXXXXXXEH 185
+ ++ VG++ ++ KL Y Q+ + LH G E
Sbjct: 225 ELFDKVVGNKRLKEATCKL-------YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 277
Query: 186 DQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCS 244
D L+ + DFG +L SL M GTP Y+APE + D W G
Sbjct: 278 DCLIKITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 245 IMEMLTGIQPW 255
+ L+G P+
Sbjct: 334 LFICLSGYPPF 344
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFMM----TP 184
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 245 CPEFMKKLQPTVRNYV--------ENRPKYA 267
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 188 LVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIME 247
L L DFG L R M ++GTP Y++P+ E + GP E D W G +
Sbjct: 165 LKLIDFG----LAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGP---ECDEWSAGVMMYV 216
Query: 248 MLTGIQPWFGKSVEEI 263
+L G P+ + E+
Sbjct: 217 LLCGYPPFSAPTDXEV 232
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFMM----TP 184
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 245 CPEFMKKLQPTVRNYV--------ENRPKYA 267
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 187 QLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPE-QWEPEVRGPISFETDTWGFGCSI 245
+L + DFG S+ S +GTP Y+APE + E G ++ D W G ++
Sbjct: 155 RLKIADFGYS----KASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
Query: 246 MEMLTGIQPW 255
ML G P+
Sbjct: 208 YVMLVGAYPF 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 182
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 183 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 215
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 182
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 183 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 215
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 182
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 183 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 183
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 184 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGXVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 184 EHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
E D L+ + DFG +L SL M GTP Y+APE + D W G
Sbjct: 150 EEDCLIKITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 205
Query: 243 CSIMEMLTGIQPW 255
+ L+G P+
Sbjct: 206 VILFICLSGYPPF 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 184 EHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
E D L+ + DFG +L SL M GTP Y+APE + D W G
Sbjct: 151 EEDCLIKITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 243 CSIMEMLTGIQPW 255
+ L+G P+
Sbjct: 207 VILFICLSGYPPF 219
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 100/255 (39%), Gaps = 27/255 (10%)
Query: 21 GDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK 80
G DHL Q I K + +G+G FG+V L + E AVK
Sbjct: 27 GPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG------QECAVK 80
Query: 81 ML--LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGS--VGD 136
++ +K+ K + + +L + + ++ L+ G + + Y G +
Sbjct: 81 VISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE 139
Query: 137 RIAQQRGGKLPLPDILRYGIQLAKGISDLHS---IGXXXXXXXXXXXXXXEHDQLVLGDF 193
I+++R ++ I+R Q+ GI+ +H + + + + DF
Sbjct: 140 IISRKRFSEVDAARIIR---QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 196
Query: 194 GIP-YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
G+ + + + D ++GT Y+APE + G + D W G + +L+G
Sbjct: 197 GLSTHFEASKKMKD-----KIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGC 247
Query: 253 QPWFGKSVEEIYHSV 267
P+ G + +I V
Sbjct: 248 PPFNGANEYDILKKV 262
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 100/255 (39%), Gaps = 27/255 (10%)
Query: 21 GDPDHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVK 80
G DHL Q I K + +G+G FG+V L + E AVK
Sbjct: 28 GPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG------QECAVK 81
Query: 81 ML--LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGS--VGD 136
++ +K+ K + + +L + + ++ L+ G + + Y G +
Sbjct: 82 VISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE 140
Query: 137 RIAQQRGGKLPLPDILRYGIQLAKGISDLHS---IGXXXXXXXXXXXXXXEHDQLVLGDF 193
I+++R ++ I+R Q+ GI+ +H + + + + DF
Sbjct: 141 IISRKRFSEVDAARIIR---QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 197
Query: 194 GIP-YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGI 252
G+ + + + D ++GT Y+APE + G + D W G + +L+G
Sbjct: 198 GLSTHFEASKKMKD-----KIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGC 248
Query: 253 QPWFGKSVEEIYHSV 267
P+ G + +I V
Sbjct: 249 PPFNGANEYDILKKV 263
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 183
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 184 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 196
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 197 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFMM----TP 184
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 245 CPEFMKKLQPTVRNYV--------ENRPKYA 267
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 184
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 185 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/275 (17%), Positives = 105/275 (38%), Gaps = 15/275 (5%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
ID + +K++ IG G FG+V +A+K L D +
Sbjct: 26 IDASCIKIEKVIGVGEFGEVCSGRLKVPGK---REICVAIKTLKAGYTDKQRRDFLSEAS 82
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
+ +F + ++ L G+ + I ++ E D ++ G+ + ++ +
Sbjct: 83 IMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIG 141
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
G+ L + + + DFG+ +L + D T
Sbjct: 142 SGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL------EDDPEAAYTTRGGK 195
Query: 220 APEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC 275
P +W PE F + D W +G + E+++ G +P++ S +++ ++ P
Sbjct: 196 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP- 254
Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ + +RP I++ +
Sbjct: 255 PPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 184 EHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
E D L+ + DFG +L SL M GTP Y+APE + D W G
Sbjct: 157 EEDCLIKITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 212
Query: 243 CSIMEMLTGIQPW 255
+ L+G P+
Sbjct: 213 VILFICLSGYPPF 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 184 EHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
E D L+ + DFG +L SL M GTP Y+APE + D W G
Sbjct: 151 EEDCLIKITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 243 CSIMEMLTGIQPW 255
+ L+G P+
Sbjct: 207 VILFICLSGYPPF 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG-----LCRH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 184 EHDQLV-LGDFGIPYLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFG 242
E D L+ + DFG +L SL M GTP Y+APE + D W G
Sbjct: 151 EEDCLIKITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 243 CSIMEMLTGIQPW 255
+ L+G P+
Sbjct: 207 VILFICLSGYPPF 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 192
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 193 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 21/218 (9%)
Query: 50 RIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEEL-FPKFRESQ 108
+IG G +G V+ A + ++ HE+ + L +D V + E+ K + +
Sbjct: 9 KIGEGTYGTVFKAKNRET-------HEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 109 SVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILR-YGIQLAKGISDLHS 167
++ LH + + K+ + +F + + + G L P+I++ + QL KG+ HS
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLK-KYFDSCNGDLD-PEIVKSFLFQLLKGLGFCHS 119
Query: 168 IGXXXXXXXXXXXXXXEHDQLVLGDFGIP--YLLLGRSLSDSDMALRLGTPNYMAPEQWE 225
+ +L L +FG+ + + R S + L P+ + +
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL- 178
Query: 226 PEVRGPISFETDTWGFGCSIMEMLTGIQPWF-GKSVEE 262
S D W GC E+ +P F G V++
Sbjct: 179 ------YSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 191
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 192 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 192
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 193 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 185
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 186 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 188
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 189 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 191
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 192 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 224
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 213 LGTPNYMAPE-QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
+GTP Y+APE + E G ++ D W G ++ ML G P+
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPF 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 206
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 207 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 239
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 193
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 194 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 205
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 206 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 238
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----LARTAGTSFMM----TP 184
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 245 CPEFMKKLQPTVRNYV--------ENRPKYA 267
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 188
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 189 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 221
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 49/275 (17%), Positives = 107/275 (38%), Gaps = 15/275 (5%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
ID + +K++ IG G FG+V + E +A+K L D +
Sbjct: 11 IDASCIKIEKVIGVGEFGEV--CSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEAS 67
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
+ +F + ++ L G+ + I ++ E D ++ G+ + ++ +
Sbjct: 68 IMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIG 126
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
G+ L + + + DFG+ +L + D T
Sbjct: 127 SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL------EDDPEAAYTTRGGK 180
Query: 220 APEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC 275
P +W PE F + D W +G + E+++ G +P++ S +++ ++ P
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP- 239
Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ + +RP I++ +
Sbjct: 240 PPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 206
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 207 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 239
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 20/124 (16%)
Query: 141 QRGGKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXXEHDQ-LVLGDFGIPYLL 199
+ G +P+ I Y QL + + +HS+G D L L DFG L
Sbjct: 133 RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL 192
Query: 200 LGRSLSDSDMALRLGTPNYMAPE------QWEPEVRGPISFETDTWGFGCSIMEMLTGIQ 253
+ S + + R Y APE ++ P + D W GC E++ G +
Sbjct: 193 IPSEPSVAXICSRF----YRAPELMLGATEYTPSI--------DLWSIGCVFGELILG-K 239
Query: 254 PWFG 257
P F
Sbjct: 240 PLFS 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 205
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 206 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 238
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 186
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 187 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 219
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 188 LVLGDFGIPYLL---LGRSLSDSDMALRLGTPNYMAPEQWEP--------EVRGPISFET 236
L L DFGI + + DS ++GT NYM PE + + + IS ++
Sbjct: 165 LKLIDFGIANQMQPDXXXVVKDS----QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
D W GC + M G P F + + +I H+++ + P +++V+ C +
Sbjct: 221 DVWSLGCILYYMTYGKTP-FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR 279
Query: 295 DLRNRPLMADIL 306
D + R + ++L
Sbjct: 280 DPKQRISIPELL 291
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 188
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 189 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 197
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 198 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 230
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 213 LGTPNYMAPE-QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
+GTP Y+APE + E G ++ D W G ++ ML G P+
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPF 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 198
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 199 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 198
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 199 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 209
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 210 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 242
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 198
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 199 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMXGXVATR 206
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 207 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 239
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 213 LGTPNYMAPE-QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
+GTP Y+APE E G I+ D W G ++ ML G P+
Sbjct: 178 VGTPAYIAPEVLLRQEYDGKIA---DVWSCGVTLYVMLVGAYPF 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMTGYVATR 192
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 193 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 225
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 49/275 (17%), Positives = 107/275 (38%), Gaps = 15/275 (5%)
Query: 40 IDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKMLLPLKEDCAKVFVNKFEE 99
ID + +K++ IG G FG+V + E +A+K L D +
Sbjct: 5 IDASCIKIEKVIGVGEFGEV--CSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEAS 61
Query: 100 LFPKFRESQSVCWLHGISVINGKICIAMKFYEGSVGDRIAQQRGGKLPLPDILRYGIQLA 159
+ +F + ++ L G+ + I ++ E D ++ G+ + ++ +
Sbjct: 62 IMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIG 120
Query: 160 KGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTPNYM 219
G+ L + + + DFG+ +L + D T
Sbjct: 121 SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL------EDDPEAAYTTRGGK 174
Query: 220 APEQWE-PEVRGPISFET--DTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPC 275
P +W PE F + D W +G + E+++ G +P++ S +++ ++ P
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP- 233
Query: 276 IPSGLPPAVENVIIGCFEYDLRNRPLMADILHAFE 310
P P A+ +++ C++ + +RP I++ +
Sbjct: 234 PPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 213 LGTPNYMAPE-QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
+GTP Y+APE + E G ++ D W G ++ ML G P+
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPF 217
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 213 LGTPNYMAPE-QWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
+GTP Y+APE + E G ++ D W G ++ ML G P+
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPF 217
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 188 LVLGDFGIPYLLLGRSLS---DSDMALRLGTPNYMAPEQWEP--------EVRGPISFET 236
L L DFGI + + S DS ++G NYM PE + + + IS ++
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDS----QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 237 DTWGFGCSIMEMLTGIQPWFGKSVEEI--YHSVVIKKEKPCIPSGLPPAVENVIIGCFEY 294
D W GC + M G P F + + +I H+++ + P +++V+ C +
Sbjct: 249 DVWSLGCILYYMTYGKTP-FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR 307
Query: 295 DLRNRPLMADIL 306
D + R + ++L
Sbjct: 308 DPKQRISIPELL 319
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARH-TDDEMXGYVATR 209
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 210 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 242
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 27/252 (10%)
Query: 24 DHLRTVVATPTQTRPWIDPTSLKLKHRIGRGPFGDVWLATHHQSADDFDEYHELAVKML- 82
DHL Q I K + +G+G FG+V L + E AVK++
Sbjct: 7 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG------QECAVKVIS 60
Query: 83 -LPLKEDCAKVFVNKFEELFPKFRESQSVCWLHGISVINGKICIAMKFYEGS--VGDRIA 139
+K+ K + + +L + + ++ L+ G + + Y G + I+
Sbjct: 61 KRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 119
Query: 140 QQRGGKLPLPDILRYGIQLAKGISDLHS---IGXXXXXXXXXXXXXXEHDQLVLGDFGIP 196
++R ++ I+R Q+ GI+ +H + + + + DFG+
Sbjct: 120 RKRFSEVDAARIIR---QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Query: 197 -YLLLGRSLSDSDMALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPW 255
+ + + D ++GT Y+APE + G + D W G + +L+G P+
Sbjct: 177 THFEASKKMKD-----KIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGCPPF 227
Query: 256 FGKSVEEIYHSV 267
G + +I V
Sbjct: 228 NGANEYDILKKV 239
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Query: 158 LAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIP-YLLLGRSLSDSDMALRLGTP 216
L + +S LH+ ++ Q+ L DFG +L G L + GTP
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL-----CGTP 263
Query: 217 NYMAPEQWE---PEVRGPISFETDTWGFGCSIMEMLTGIQPWFGK 258
Y+APE + E E D W G + +L G P++ +
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR 308
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARHTAD-EMTGYVATR 193
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 194 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARHTAD-EMTGYVATR 193
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 194 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ +G+ +HS E +L + DFG L R +D +M + T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-----LARHTAD-EMTGYVATR 193
Query: 217 NYMAPE---QWEPEVRGPISFETDTWGFGCSIMEMLTG 251
Y APE W + D W GC + E+LTG
Sbjct: 194 WYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTG 226
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 178
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 239 CPEFMKKLQPTVRNYV--------ENRPKYA 261
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 177
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 238 CPEFMKKLQPTVRNYV--------ENRPKYA 260
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 222
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 283 CPEFMKKLQPTVRNYV--------ENRPKYA 305
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 178
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 239 CPEFMKKLQPTVRNYV--------ENRPKYA 261
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 185
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 246 CPEFMKKLQPTVRNYV--------ENRPKYA 268
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 65/191 (34%), Gaps = 30/191 (15%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 185
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ G + G + ++ V+ + P
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRP---------LMADILHAFESSQNAVYNDGEWT 323
C L P V + NRP L D+L +S N +
Sbjct: 246 CPEFMKKLQPTVRTYV--------ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 297
Query: 324 GLGSRALTDTS 334
L + D S
Sbjct: 298 LLSKMLVIDAS 308
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 183
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 244 CPEFMKKLQPTVRNYV--------ENRPKYA 266
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 222
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 283 CPEFMKKLQPTVRNYV--------ENRPKYA 305
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 184
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 245 CPEFMKKLQPTVRNYV--------ENRPKYA 267
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 185
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 246 CPEFMKKLQPTVRNYV--------ENRPKYA 268
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 65/191 (34%), Gaps = 30/191 (15%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 184
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ G + G + ++ V+ + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRP---------LMADILHAFESSQNAVYNDGEWT 323
C L P V + NRP L D+L +S N +
Sbjct: 245 CPEFMKKLQPTVRTYV--------ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Query: 324 GLGSRALTDTS 334
L + D S
Sbjct: 297 LLSKMLVIDAS 307
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 157 QLAKGISDLHSIGXXXXXXXXXXXXXXEHDQLVLGDFGIPYLLLGRSLSDSDMALRLGTP 216
Q+ GI LHS G L + DFG L R+ S M TP
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----LARTAGTSFMM----TP 184
Query: 217 NYMAPEQWEPEVRGPISFE--TDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKKEKP 274
+ PEV + ++ D W GC + EM+ + G+ + ++ V+ + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 275 C--IPSGLPPAVENVIIGCFEYDLRNRPLMA 303
C L P V N + NRP A
Sbjct: 245 CPEFMKKLQPTVRNYV--------ENRPKYA 267
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 MALRLGTPNYMAPEQWEPEVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSV 267
M ++GT Y+APE + G + D W G + +L+G P+ G + +I V
Sbjct: 191 MKDKIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 232 ISFETDTWGFGCSIMEMLT-GIQPWFGKSVEEIYHSVVIKKEKPCIPSGLPPAVENVIIG 290
++ TD W FG ++ E+ + G +P S + + +++ +P+ + N+I
Sbjct: 195 LNLATDKWSFGTTLWEICSGGDKPL---SALDSQRKLQFYEDRHQLPAPKAAELANLINN 251
Query: 291 CFEYDLRNRPLMADILHAFES 311
C +Y+ +RP I+ S
Sbjct: 252 CMDYEPDHRPSFRAIIRDLNS 272
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,180,485
Number of Sequences: 62578
Number of extensions: 891423
Number of successful extensions: 3373
Number of sequences better than 100.0: 729
Number of HSP's better than 100.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 560
Number of HSP's that attempted gapping in prelim test: 2629
Number of HSP's gapped (non-prelim): 826
length of query: 632
length of database: 14,973,337
effective HSP length: 105
effective length of query: 527
effective length of database: 8,402,647
effective search space: 4428194969
effective search space used: 4428194969
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)