Query 006776
Match_columns 631
No_of_seqs 273 out of 2980
Neff 9.9
Searched_HMMs 46136
Date Thu Mar 28 14:19:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006776.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006776hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02654 acetate-CoA ligase 100.0 1E-106 3E-111 900.4 69.6 629 1-630 35-665 (666)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 2E-106 5E-111 838.5 56.8 521 45-605 1-522 (528)
3 KOG1175 Acyl-CoA synthetase [L 100.0 1E-104 3E-109 824.7 57.1 607 1-629 16-624 (626)
4 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2E-101 5E-106 857.6 68.9 612 1-627 10-624 (625)
5 PTZ00237 acetyl-CoA synthetase 100.0 2.3E-99 5E-104 839.7 66.0 610 1-628 13-644 (647)
6 TIGR02316 propion_prpE propion 100.0 2.9E-98 6E-103 831.7 69.3 610 1-629 6-626 (628)
7 PRK00174 acetyl-CoA synthetase 100.0 2E-97 4E-102 827.6 69.2 613 1-630 22-634 (637)
8 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2.6E-97 6E-102 824.8 66.7 604 1-629 40-648 (652)
9 PRK10524 prpE propionyl-CoA sy 100.0 2E-96 4E-101 818.8 67.7 610 1-629 7-627 (629)
10 PRK03584 acetoacetyl-CoA synth 100.0 7.7E-95 1.7E-99 808.8 67.7 606 1-629 39-650 (655)
11 PLN03052 acetate--CoA ligase; 100.0 3.2E-90 7E-95 770.5 63.1 577 1-606 125-722 (728)
12 KOG1176 Acyl-CoA synthetase [L 100.0 1.2E-81 2.5E-86 657.7 51.4 500 67-606 29-533 (537)
13 KOG1177 Long chain fatty acid 100.0 3E-79 6.4E-84 593.6 42.0 523 54-607 51-589 (596)
14 PRK04319 acetyl-CoA synthetase 100.0 3.4E-77 7.4E-82 657.1 58.1 537 44-618 34-570 (570)
15 COG0318 CaiC Acyl-CoA syntheta 100.0 3.3E-74 7.1E-79 624.2 53.6 511 54-605 12-527 (534)
16 PRK07529 AMP-binding domain pr 100.0 1.3E-71 2.9E-76 617.6 57.2 526 54-605 26-570 (632)
17 PRK07788 acyl-CoA synthetase; 100.0 9.6E-72 2.1E-76 611.7 51.2 500 53-602 49-548 (549)
18 PRK13295 cyclohexanecarboxylat 100.0 2E-70 4.3E-75 600.7 56.9 517 45-606 20-545 (547)
19 PLN02736 long-chain acyl-CoA s 100.0 4.7E-71 1E-75 615.9 46.8 527 51-611 42-647 (651)
20 PLN02860 o-succinylbenzoate-Co 100.0 1.8E-70 3.9E-75 602.5 50.5 515 55-610 9-559 (563)
21 COG1021 EntE Peptide arylation 100.0 2.6E-71 5.7E-76 526.0 35.4 507 55-606 30-539 (542)
22 PLN02574 4-coumarate--CoA liga 100.0 5E-70 1.1E-74 598.6 51.2 511 51-606 39-555 (560)
23 PRK06060 acyl-CoA synthetase; 100.0 1.5E-69 3.4E-74 609.6 52.1 485 55-604 6-491 (705)
24 PRK06334 long chain fatty acid 100.0 2.2E-69 4.8E-74 589.5 49.0 505 53-605 19-535 (539)
25 PRK13382 acyl-CoA synthetase; 100.0 6.7E-69 1.4E-73 586.6 52.3 492 55-601 45-536 (537)
26 PLN02614 long-chain acyl-CoA s 100.0 8.5E-70 1.8E-74 604.0 45.1 529 52-611 44-655 (666)
27 PLN02246 4-coumarate--CoA liga 100.0 1.4E-68 3.1E-73 584.9 53.5 504 55-604 25-535 (537)
28 PRK05852 acyl-CoA synthetase; 100.0 1.3E-68 2.9E-73 584.7 52.9 519 45-605 8-532 (534)
29 PRK07656 long-chain-fatty-acid 100.0 5.2E-68 1.1E-72 578.4 53.8 506 54-601 6-512 (513)
30 PRK05677 long-chain-fatty-acid 100.0 5.7E-68 1.2E-72 582.9 53.5 514 55-606 26-558 (562)
31 PRK12583 acyl-CoA synthetase; 100.0 1E-67 2.2E-72 581.9 55.0 521 54-608 19-555 (558)
32 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 8.6E-68 1.9E-72 578.9 53.2 506 54-600 23-537 (538)
33 PRK08314 long-chain-fatty-acid 100.0 7.1E-68 1.5E-72 581.4 52.6 515 54-605 11-542 (546)
34 PRK06839 acyl-CoA synthetase; 100.0 1.6E-67 3.5E-72 572.0 54.4 490 56-605 5-495 (496)
35 PLN02861 long-chain-fatty-acid 100.0 1.4E-68 3.1E-73 594.8 46.5 530 51-612 41-653 (660)
36 PRK08316 acyl-CoA synthetase; 100.0 3E-67 6.5E-72 573.9 54.5 513 51-607 9-521 (523)
37 PRK05605 long-chain-fatty-acid 100.0 2.6E-67 5.5E-72 579.7 54.0 513 55-606 34-570 (573)
38 PRK05857 acyl-CoA synthetase; 100.0 1.1E-67 2.5E-72 577.3 50.5 506 55-609 16-535 (540)
39 TIGR02262 benz_CoA_lig benzoat 100.0 4.7E-67 1E-71 569.4 52.8 507 51-602 2-508 (508)
40 PRK06087 short chain acyl-CoA 100.0 5.7E-67 1.2E-71 573.8 53.6 512 55-607 25-538 (547)
41 PRK06145 acyl-CoA synthetase; 100.0 7E-67 1.5E-71 566.9 52.7 493 56-605 5-497 (497)
42 PRK07008 long-chain-fatty-acid 100.0 8E-67 1.7E-71 570.9 53.3 512 54-606 11-534 (539)
43 PRK06155 crotonobetaine/carnit 100.0 1.1E-66 2.4E-71 569.4 53.9 502 54-605 22-524 (542)
44 PTZ00342 acyl-CoA synthetase; 100.0 2.1E-67 4.6E-72 582.9 48.3 522 53-607 61-736 (746)
45 PRK07470 acyl-CoA synthetase; 100.0 1.2E-66 2.6E-71 569.0 53.4 503 55-606 9-519 (528)
46 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.3E-66 2.8E-71 568.2 53.4 500 55-600 25-527 (527)
47 PRK08008 caiC putative crotono 100.0 1.6E-66 3.6E-71 566.6 53.1 509 53-600 7-517 (517)
48 PRK07638 acyl-CoA synthetase; 100.0 1.3E-66 2.8E-71 562.9 51.9 479 56-606 4-482 (487)
49 PRK09274 peptide synthase; Pro 100.0 7.3E-67 1.6E-71 573.7 50.4 514 52-606 6-549 (552)
50 PRK07769 long-chain-fatty-acid 100.0 5.2E-67 1.1E-71 582.5 49.6 510 55-606 23-615 (631)
51 PRK06187 long-chain-fatty-acid 100.0 2.7E-66 5.9E-71 566.2 53.9 507 54-605 7-519 (521)
52 PRK05620 long-chain-fatty-acid 100.0 1.9E-66 4.1E-71 572.5 52.7 522 55-606 12-558 (576)
53 PRK07786 long-chain-fatty-acid 100.0 3.4E-66 7.3E-71 566.6 52.4 511 49-606 14-525 (542)
54 PRK08315 AMP-binding domain pr 100.0 1.1E-65 2.3E-70 565.8 55.8 520 54-607 17-553 (559)
55 PLN02330 4-coumarate--CoA liga 100.0 1.9E-66 4.2E-71 569.0 49.6 501 54-606 29-542 (546)
56 TIGR03443 alpha_am_amid L-amin 100.0 1.7E-66 3.6E-71 626.9 54.0 525 53-603 236-826 (1389)
57 PRK13390 acyl-CoA synthetase; 100.0 2.1E-66 4.5E-71 563.4 49.4 492 61-600 5-501 (501)
58 PRK09088 acyl-CoA synthetase; 100.0 5.2E-66 1.1E-70 558.6 52.0 482 60-606 2-486 (488)
59 TIGR03098 ligase_PEP_1 acyl-Co 100.0 6.9E-66 1.5E-70 561.9 53.4 504 55-601 2-514 (515)
60 PRK07514 malonyl-CoA synthase; 100.0 8.6E-66 1.9E-70 559.5 53.4 497 55-606 5-502 (504)
61 PRK08043 bifunctional acyl-[ac 100.0 1.4E-66 3.1E-71 585.8 47.6 499 55-605 206-713 (718)
62 PRK10946 entE enterobactin syn 100.0 1.5E-65 3.2E-70 560.4 53.9 505 54-606 26-533 (536)
63 PRK06018 putative acyl-CoA syn 100.0 1.3E-65 2.9E-70 561.9 53.5 512 54-605 11-534 (542)
64 PRK03640 O-succinylbenzoic aci 100.0 7.6E-66 1.7E-70 556.8 50.4 478 55-605 4-482 (483)
65 PRK12476 putative fatty-acid-- 100.0 3E-66 6.4E-71 574.0 47.8 508 55-606 36-607 (612)
66 PLN03102 acyl-activating enzym 100.0 2.1E-65 4.6E-70 563.1 53.5 511 55-606 16-555 (579)
67 PRK13388 acyl-CoA synthetase; 100.0 2.1E-65 4.6E-70 559.0 52.5 487 55-606 5-507 (540)
68 PRK06178 acyl-CoA synthetase; 100.0 3.2E-65 6.9E-70 562.3 54.3 522 45-605 26-565 (567)
69 PRK12492 long-chain-fatty-acid 100.0 2E-65 4.3E-70 562.7 52.5 515 54-602 25-561 (562)
70 PRK06188 acyl-CoA synthetase; 100.0 5.4E-65 1.2E-69 555.4 54.3 500 54-604 13-516 (524)
71 PRK05851 long-chain-fatty-acid 100.0 4.5E-66 9.8E-71 562.7 45.5 494 52-605 1-522 (525)
72 PLN02387 long-chain-fatty-acid 100.0 4E-66 8.6E-71 577.4 45.9 534 52-611 57-695 (696)
73 PLN02430 long-chain-fatty-acid 100.0 6.6E-66 1.4E-70 572.3 44.6 531 50-611 39-652 (660)
74 PRK07059 Long-chain-fatty-acid 100.0 1.5E-64 3.2E-69 555.7 53.8 515 50-602 20-555 (557)
75 PRK06710 long-chain-fatty-acid 100.0 7.6E-65 1.7E-69 558.8 51.5 515 54-607 25-557 (563)
76 TIGR01734 D-ala-DACP-lig D-ala 100.0 9.5E-65 2.1E-69 551.0 51.7 494 56-605 3-502 (502)
77 TIGR03205 pimA dicarboxylate-- 100.0 2E-64 4.4E-69 552.7 53.3 510 54-600 22-541 (541)
78 PRK07867 acyl-CoA synthetase; 100.0 2.2E-64 4.8E-69 549.3 53.0 486 55-608 7-510 (529)
79 PLN03051 acyl-activating enzym 100.0 1.4E-64 3.1E-69 547.2 50.4 470 117-607 1-493 (499)
80 PRK13391 acyl-CoA synthetase; 100.0 2.8E-64 6E-69 547.9 52.8 502 61-606 5-510 (511)
81 PRK06164 acyl-CoA synthetase; 100.0 3.1E-64 6.6E-69 551.6 52.7 513 54-607 11-534 (540)
82 PRK08180 feruloyl-CoA synthase 100.0 2.8E-65 6.1E-70 566.0 44.7 515 54-612 40-603 (614)
83 PRK13383 acyl-CoA synthetase; 100.0 1.7E-64 3.7E-69 550.0 49.4 481 51-600 34-515 (516)
84 PRK08279 long-chain-acyl-CoA s 100.0 3E-64 6.5E-69 557.8 50.7 501 54-606 38-565 (600)
85 PRK08751 putative long-chain f 100.0 4.8E-64 1E-68 552.3 51.5 510 54-602 26-557 (560)
86 PRK07787 acyl-CoA synthetase; 100.0 5.8E-64 1.3E-68 539.5 50.3 455 66-601 12-469 (471)
87 PRK10252 entF enterobactin syn 100.0 1.4E-64 3E-69 608.4 50.4 491 54-602 459-964 (1296)
88 PRK04813 D-alanine--poly(phosp 100.0 2.1E-63 4.5E-68 540.9 52.1 493 56-604 5-502 (503)
89 PRK12467 peptide synthase; Pro 100.0 8.4E-65 1.8E-69 650.3 47.7 492 53-605 3095-3594(3956)
90 PRK08276 long-chain-fatty-acid 100.0 2.6E-63 5.6E-68 539.5 52.0 484 82-606 8-497 (502)
91 PRK12316 peptide synthase; Pro 100.0 3E-64 6.6E-69 655.1 51.9 491 53-604 511-1005(5163)
92 PRK07798 acyl-CoA synthetase; 100.0 7.4E-63 1.6E-67 540.6 54.8 508 55-605 5-532 (533)
93 PRK08633 2-acyl-glycerophospho 100.0 9.9E-64 2.1E-68 595.1 51.2 508 53-605 615-1143(1146)
94 PRK12467 peptide synthase; Pro 100.0 2.9E-64 6.2E-69 645.4 48.7 498 54-605 1575-2085(3956)
95 PTZ00216 acyl-CoA synthetase; 100.0 6.7E-64 1.4E-68 561.0 45.2 520 54-611 70-697 (700)
96 PLN02479 acetate-CoA ligase 100.0 7.4E-63 1.6E-67 542.6 52.6 518 55-605 22-558 (567)
97 PRK07445 O-succinylbenzoic aci 100.0 1.9E-63 4.1E-68 529.7 45.9 430 85-607 19-449 (452)
98 PRK12316 peptide synthase; Pro 100.0 1.5E-63 3.2E-68 648.7 49.8 492 54-604 2004-2503(5163)
99 PRK12582 acyl-CoA synthetase; 100.0 2.3E-63 4.9E-68 551.8 44.1 528 54-622 50-622 (624)
100 COG1022 FAA1 Long-chain acyl-C 100.0 3.4E-63 7.4E-68 522.4 41.7 517 45-611 8-607 (613)
101 PRK12406 long-chain-fatty-acid 100.0 1.1E-61 2.4E-66 527.4 54.9 488 83-606 9-504 (509)
102 PRK08974 long-chain-fatty-acid 100.0 1.7E-61 3.7E-66 531.8 55.2 515 54-607 24-557 (560)
103 PRK09192 acyl-CoA synthetase; 100.0 1.5E-62 3.2E-67 541.6 46.3 505 53-606 21-567 (579)
104 KOG1256 Long-chain acyl-CoA sy 100.0 1.3E-62 2.8E-67 509.0 42.2 537 43-611 67-686 (691)
105 PRK05691 peptide synthase; Val 100.0 1.4E-62 3E-67 635.6 49.3 498 54-602 3721-4225(4334)
106 PRK06814 acylglycerophosphoeth 100.0 6E-62 1.3E-66 577.5 50.8 499 56-607 634-1134(1140)
107 PRK05691 peptide synthase; Val 100.0 2.4E-62 5.1E-67 633.4 50.5 491 53-603 1131-1626(4334)
108 PRK05850 acyl-CoA synthetase; 100.0 1.1E-61 2.3E-66 535.5 48.5 511 55-606 3-569 (578)
109 PRK07868 acyl-CoA synthetase; 100.0 1.1E-61 2.4E-66 558.4 50.3 491 55-605 449-958 (994)
110 PRK08162 acyl-CoA synthetase; 100.0 1.8E-60 4E-65 522.3 54.8 507 55-606 20-540 (545)
111 PRK09029 O-succinylbenzoic aci 100.0 4.2E-61 9.1E-66 515.6 46.8 445 61-607 11-455 (458)
112 PRK07768 long-chain-fatty-acid 100.0 2.8E-60 6.1E-65 520.7 46.0 498 55-604 4-544 (545)
113 TIGR01923 menE O-succinylbenzo 100.0 5.1E-59 1.1E-63 496.9 46.3 435 87-599 1-436 (436)
114 PRK08308 acyl-CoA synthetase; 100.0 4.2E-58 9E-63 485.4 47.3 403 83-600 6-408 (414)
115 KOG1180 Acyl-CoA synthetase [L 100.0 8.6E-57 1.9E-61 444.2 32.1 505 81-611 85-675 (678)
116 PF00501 AMP-binding: AMP-bind 100.0 2.8E-56 6.1E-61 472.9 34.0 413 59-507 1-417 (417)
117 KOG1179 Very long-chain acyl-C 100.0 8.3E-55 1.8E-59 432.3 39.8 503 55-602 79-610 (649)
118 TIGR01733 AA-adenyl-dom amino 100.0 3.5E-52 7.5E-57 440.4 41.7 397 87-531 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 3.3E-47 7.1E-52 394.4 35.3 323 238-605 33-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 1.7E-45 3.6E-50 423.3 42.1 497 45-611 419-1001(1452)
121 COG1020 EntF Non-ribosomal pep 100.0 3E-39 6.4E-44 361.2 39.5 415 54-524 228-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 1.4E-39 3.1E-44 335.2 30.6 291 239-595 94-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 7.4E-38 1.6E-42 330.9 30.2 329 237-597 72-418 (422)
124 KOG1178 Non-ribosomal peptide 100.0 1.4E-31 3E-36 292.9 26.8 509 58-603 41-577 (1032)
125 TIGR03335 F390_ftsA coenzyme F 100.0 2.5E-30 5.4E-35 273.5 30.7 330 237-597 83-441 (445)
126 KOG3628 Predicted AMP-binding 100.0 1.2E-27 2.6E-32 253.3 39.4 519 53-605 770-1351(1363)
127 COG1541 PaaK Coenzyme F390 syn 100.0 3E-27 6.5E-32 236.5 29.4 328 236-595 86-429 (438)
128 TIGR03089 conserved hypothetic 99.9 2.7E-26 5.9E-31 219.0 23.3 223 60-336 3-227 (227)
129 PRK09188 serine/threonine prot 99.9 5.3E-24 1.2E-28 214.4 17.4 140 476-629 207-350 (365)
130 KOG3628 Predicted AMP-binding 99.8 2.5E-18 5.3E-23 183.4 27.3 495 65-605 105-704 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 3.4E-17 7.4E-22 169.2 24.9 246 241-533 100-365 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.4 1.3E-12 2.8E-17 100.6 7.3 70 515-593 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 99.0 3.3E-08 7.1E-13 100.4 20.8 235 237-502 86-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.7 4.5E-07 9.7E-12 97.6 15.5 163 361-552 266-452 (528)
135 PLN02249 indole-3-acetic acid- 98.1 0.00076 1.7E-08 73.1 23.9 133 361-522 301-456 (597)
136 PF14535 AMP-binding_C_2: AMP- 98.0 4.6E-05 1E-09 61.7 9.2 85 508-596 1-91 (96)
137 PLN02247 indole-3-acetic acid- 97.9 0.00069 1.5E-08 72.8 18.4 61 440-523 398-464 (606)
138 PLN02620 indole-3-acetic acid- 97.8 0.019 4.2E-07 61.8 27.4 135 360-523 302-470 (612)
139 COG1541 PaaK Coenzyme F390 syn 94.0 0.28 6E-06 50.8 8.9 84 84-168 108-193 (438)
140 TIGR03335 F390_ftsA coenzyme F 86.1 5.3 0.00011 42.6 10.4 79 84-165 104-184 (445)
141 TIGR02155 PA_CoA_ligase phenyl 84.4 4.9 0.00011 42.5 9.2 82 85-167 94-177 (422)
142 TIGR03089 conserved hypothetic 79.6 10 0.00022 36.2 8.5 54 103-158 171-226 (227)
143 KOG1177 Long chain fatty acid 71.5 39 0.00084 35.5 10.3 99 66-167 231-334 (596)
144 PF09580 Spore_YhcN_YlaJ: Spor 70.5 15 0.00033 33.3 6.9 57 512-573 76-132 (177)
145 PRK07656 long-chain-fatty-acid 69.5 48 0.001 35.7 11.8 96 67-166 164-264 (513)
146 TIGR02080 O_succ_thio_ly O-suc 69.1 1.5E+02 0.0032 30.8 15.1 72 107-179 87-158 (382)
147 PRK08315 AMP-binding domain pr 68.7 53 0.0011 36.0 12.1 96 68-166 198-298 (559)
148 PLN02736 long-chain acyl-CoA s 66.6 69 0.0015 36.0 12.6 120 238-370 57-180 (651)
149 PRK06187 long-chain-fatty-acid 66.4 72 0.0016 34.4 12.5 96 68-167 166-265 (521)
150 PRK12583 acyl-CoA synthetase; 65.3 73 0.0016 34.8 12.3 97 67-166 199-300 (558)
151 PLN03051 acyl-activating enzym 60.4 70 0.0015 34.6 10.8 96 68-166 118-217 (499)
152 PRK06334 long chain fatty acid 59.4 1.1E+02 0.0025 33.3 12.4 97 67-166 181-282 (539)
153 TIGR02898 spore_YhcN_YlaJ spor 59.2 47 0.001 29.5 7.3 52 513-571 56-107 (158)
154 TIGR01923 menE O-succinylbenzo 55.9 98 0.0021 32.5 10.9 93 68-166 110-206 (436)
155 PRK10877 protein disulfide iso 55.6 88 0.0019 29.9 9.3 76 483-567 55-133 (232)
156 PRK06702 O-acetylhomoserine am 54.6 1E+02 0.0022 32.7 10.3 76 101-179 92-169 (432)
157 cd01445 TST_Repeats Thiosulfat 53.4 35 0.00077 29.5 5.7 42 95-136 80-124 (138)
158 PRK04319 acetyl-CoA synthetase 52.7 1.3E+02 0.0027 33.2 11.4 96 68-166 204-304 (570)
159 TIGR02379 ECA_wecE TDP-4-keto- 52.0 1.1E+02 0.0023 31.8 10.0 72 101-179 62-138 (376)
160 PRK05939 hypothetical protein; 51.3 1E+02 0.0022 32.3 9.7 77 100-179 77-153 (397)
161 PF00501 AMP-binding: AMP-bind 51.1 91 0.002 32.5 9.6 89 238-340 8-99 (417)
162 PRK08574 cystathionine gamma-s 51.1 1.1E+02 0.0024 31.8 9.9 71 107-179 89-159 (385)
163 PRK06164 acyl-CoA synthetase; 51.0 1.5E+02 0.0032 32.3 11.6 96 67-166 179-278 (540)
164 TIGR01733 AA-adenyl-dom amino 50.8 1.8E+02 0.0039 30.0 11.9 97 68-167 119-221 (408)
165 TIGR03098 ligase_PEP_1 acyl-Co 50.4 1.1E+02 0.0023 33.1 10.3 81 83-167 178-259 (515)
166 TIGR02262 benz_CoA_lig benzoat 49.9 1.6E+02 0.0034 31.7 11.5 98 67-166 159-261 (508)
167 PRK03640 O-succinylbenzoic aci 49.8 1.5E+02 0.0033 31.6 11.3 96 67-166 139-238 (483)
168 PRK08043 bifunctional acyl-[ac 49.3 1.8E+02 0.0039 33.2 12.2 96 67-165 363-463 (718)
169 PLN02860 o-succinylbenzoate-Co 48.2 1.8E+02 0.004 31.9 11.8 97 67-167 170-270 (563)
170 PRK11706 TDP-4-oxo-6-deoxy-D-g 46.8 80 0.0017 32.7 8.2 61 101-165 62-127 (375)
171 PRK08308 acyl-CoA synthetase; 46.7 2.4E+02 0.0051 29.4 11.9 96 67-166 99-199 (414)
172 COG0399 WecE Predicted pyridox 46.1 82 0.0018 32.4 7.8 66 96-165 60-130 (374)
173 PRK08045 cystathionine gamma-s 45.5 1.8E+02 0.004 30.2 10.5 71 107-179 88-159 (386)
174 PRK08279 long-chain-acyl-CoA s 45.5 2.1E+02 0.0045 31.7 11.8 95 67-165 197-296 (600)
175 PRK08316 acyl-CoA synthetase; 45.3 2.3E+02 0.0051 30.4 12.0 95 68-166 170-269 (523)
176 PF01041 DegT_DnrJ_EryC1: DegT 44.4 58 0.0013 33.5 6.6 66 96-165 51-121 (363)
177 PF01514 YscJ_FliF: Secretory 43.6 99 0.0022 28.9 7.4 72 512-585 116-194 (206)
178 PRK07503 methionine gamma-lyas 43.5 1.8E+02 0.0038 30.5 10.1 71 107-179 101-172 (403)
179 PLN03052 acetate--CoA ligase; 43.5 1.5E+02 0.0031 34.1 10.2 99 239-343 189-289 (728)
180 PRK05620 long-chain-fatty-acid 43.1 2.2E+02 0.0048 31.3 11.5 99 67-166 179-281 (576)
181 PRK05934 type III secretion sy 42.9 1.7E+02 0.0036 29.0 8.7 72 514-586 74-149 (341)
182 PRK07050 cystathionine beta-ly 42.3 4.2E+02 0.0091 27.6 13.9 58 107-166 101-159 (394)
183 COG1167 ARO8 Transcriptional r 42.0 1.3E+02 0.0028 32.2 9.0 89 279-394 176-264 (459)
184 PLN02565 cysteine synthase 41.9 2.1E+02 0.0045 28.9 9.9 67 100-166 55-122 (322)
185 PRK06234 methionine gamma-lyas 41.8 2.3E+02 0.0049 29.7 10.6 72 107-180 100-172 (400)
186 PRK06188 acyl-CoA synthetase; 41.5 2.2E+02 0.0049 30.7 11.1 95 68-166 167-264 (524)
187 TIGR01217 ac_ac_CoA_syn acetoa 40.7 1.6E+02 0.0034 33.2 9.9 94 240-342 99-194 (652)
188 PLN02430 long-chain-fatty-acid 40.6 4E+02 0.0086 30.1 13.1 69 276-349 95-163 (660)
189 KOG1179 Very long-chain acyl-C 40.6 1.1E+02 0.0023 33.1 7.6 73 85-162 261-336 (649)
190 TIGR02188 Ac_CoA_lig_AcsA acet 40.4 1.4E+02 0.0031 33.2 9.6 98 238-343 70-169 (625)
191 cd00615 Orn_deC_like Ornithine 40.3 2.2E+02 0.0047 28.2 9.8 69 107-179 96-175 (294)
192 PRK13295 cyclohexanecarboxylat 40.0 3.6E+02 0.0078 29.4 12.5 96 67-166 195-295 (547)
193 COG0318 CaiC Acyl-CoA syntheta 39.7 2.8E+02 0.0061 30.3 11.4 98 67-165 169-272 (534)
194 TIGR02618 tyr_phenol_ly tyrosi 39.6 2.1E+02 0.0046 30.3 9.7 67 86-157 71-167 (450)
195 PLN02614 long-chain acyl-CoA s 39.5 4.5E+02 0.0097 29.7 13.3 70 276-350 98-167 (666)
196 PLN02387 long-chain-fatty-acid 39.2 2.5E+02 0.0053 32.0 11.2 85 276-371 125-209 (696)
197 PRK11658 UDP-4-amino-4-deoxy-L 39.0 2.4E+02 0.0052 29.2 10.3 64 97-164 60-128 (379)
198 PF01037 AsnC_trans_reg: AsnC 38.8 1.4E+02 0.0031 21.9 6.5 48 511-571 10-57 (74)
199 COG1167 ARO8 Transcriptional r 38.6 2.8E+02 0.006 29.7 10.8 59 108-169 177-238 (459)
200 PRK11761 cysM cysteine synthas 38.4 2.2E+02 0.0048 28.3 9.5 64 101-165 53-117 (296)
201 PRK03584 acetoacetyl-CoA synth 38.4 1.9E+02 0.0041 32.6 10.1 96 239-343 98-195 (655)
202 TIGR03588 PseC UDP-4-keto-6-de 37.7 2.9E+02 0.0063 28.5 10.7 67 96-165 55-129 (380)
203 PF09269 DUF1967: Domain of un 37.7 27 0.00058 26.0 2.1 30 86-115 33-62 (69)
204 PRK09028 cystathionine beta-ly 37.6 2.8E+02 0.0061 29.0 10.4 68 107-176 97-165 (394)
205 PRK08776 cystathionine gamma-s 37.6 2.5E+02 0.0054 29.5 10.1 72 107-180 96-168 (405)
206 COG0079 HisC Histidinol-phosph 37.3 3.9E+02 0.0085 27.4 11.2 86 107-202 96-184 (356)
207 COG1022 FAA1 Long-chain acyl-C 37.0 3.1E+02 0.0067 30.5 10.9 99 66-168 188-290 (613)
208 TIGR01139 cysK cysteine syntha 36.7 2.8E+02 0.0061 27.5 10.0 64 102-166 48-112 (298)
209 TIGR03595 Obg_CgtA_exten Obg f 36.6 40 0.00087 25.1 2.9 19 98-116 45-63 (69)
210 PRK09331 Sep-tRNA:Cys-tRNA syn 36.4 3E+02 0.0064 28.6 10.5 70 107-179 99-180 (387)
211 PRK08314 long-chain-fatty-acid 35.9 3.7E+02 0.0081 29.1 11.8 96 67-166 188-288 (546)
212 PRK08248 O-acetylhomoserine am 35.9 2.7E+02 0.0058 29.5 10.1 76 101-179 95-171 (431)
213 PRK08134 O-acetylhomoserine am 35.8 2.9E+02 0.0063 29.3 10.3 72 107-180 100-172 (433)
214 PRK13388 acyl-CoA synthetase; 35.8 4.2E+02 0.009 28.9 12.1 94 67-164 148-246 (540)
215 PRK07638 acyl-CoA synthetase; 35.8 2.9E+02 0.0063 29.4 10.8 81 83-167 160-241 (487)
216 PTZ00342 acyl-CoA synthetase; 35.7 2.8E+02 0.0061 31.8 10.9 84 277-371 114-208 (746)
217 PRK09274 peptide synthase; Pro 35.2 2.9E+02 0.0063 30.1 10.8 99 239-342 20-121 (552)
218 PLN02861 long-chain-fatty-acid 34.6 3.7E+02 0.0081 30.3 11.7 86 259-349 77-164 (660)
219 PF08734 GYD: GYD domain; Int 34.5 2.3E+02 0.005 22.4 7.3 66 88-153 15-90 (91)
220 PRK07788 acyl-CoA synthetase; 34.3 2.1E+02 0.0046 31.2 9.5 69 276-349 93-161 (549)
221 PRK05967 cystathionine beta-ly 34.2 3.2E+02 0.007 28.5 10.2 58 107-166 100-158 (395)
222 PRK10524 prpE propionyl-CoA sy 34.1 2.3E+02 0.0049 31.7 9.9 96 239-342 67-164 (629)
223 PRK08861 cystathionine gamma-s 33.8 3.4E+02 0.0073 28.3 10.3 72 107-180 89-161 (388)
224 cd01449 TST_Repeat_2 Thiosulfa 33.3 87 0.0019 25.8 4.9 40 96-135 64-103 (118)
225 TIGR02316 propion_prpE propion 33.3 2.3E+02 0.005 31.7 9.7 96 239-342 66-163 (628)
226 PRK02261 methylaspartate mutas 33.0 1.8E+02 0.0039 25.1 6.8 113 284-401 7-121 (137)
227 PRK14807 histidinol-phosphate 32.9 3.9E+02 0.0085 27.1 10.6 67 107-176 97-167 (351)
228 PLN02246 4-coumarate--CoA liga 32.8 2.9E+02 0.0064 30.0 10.3 99 238-348 36-136 (537)
229 PRK13237 tyrosine phenol-lyase 32.8 2.7E+02 0.0058 29.7 9.2 67 86-157 78-174 (460)
230 PRK05850 acyl-CoA synthetase; 32.8 4E+02 0.0087 29.2 11.5 106 238-349 14-124 (578)
231 PRK07529 AMP-binding domain pr 32.6 2.4E+02 0.0052 31.6 9.7 96 238-341 38-136 (632)
232 PRK05852 acyl-CoA synthetase; 32.3 5E+02 0.011 28.1 12.1 81 83-166 193-276 (534)
233 PRK08133 O-succinylhomoserine 32.3 3.7E+02 0.008 28.0 10.4 71 107-179 97-168 (390)
234 PTZ00237 acetyl-CoA synthetase 32.1 2.6E+02 0.0057 31.4 9.9 96 239-342 75-172 (647)
235 PRK10874 cysteine sulfinate de 31.9 3.8E+02 0.0082 27.8 10.5 80 99-179 98-182 (401)
236 TIGR02544 III_secr_YscJ type I 31.8 2.8E+02 0.006 25.6 8.2 69 513-583 109-184 (193)
237 TIGR01136 cysKM cysteine synth 31.7 3.6E+02 0.0077 26.8 9.8 64 102-166 49-113 (299)
238 PRK09509 fieF ferrous iron eff 31.6 1.8E+02 0.0039 28.9 7.6 61 513-573 215-277 (299)
239 PRK15407 lipopolysaccharide bi 31.3 1.8E+02 0.0038 31.0 7.8 58 104-165 105-167 (438)
240 PRK10696 tRNA 2-thiocytidine b 31.3 4.9E+02 0.011 25.2 10.5 70 95-164 13-94 (258)
241 PRK08008 caiC putative crotono 31.2 3.1E+02 0.0066 29.6 10.1 68 276-348 56-123 (517)
242 PLN03013 cysteine synthase 31.2 3.4E+02 0.0073 28.7 9.6 65 102-166 165-230 (429)
243 PRK07470 acyl-CoA synthetase; 30.9 5.4E+02 0.012 27.7 12.0 100 67-167 161-264 (528)
244 COG0031 CysK Cysteine synthase 30.4 4.1E+02 0.009 26.4 9.5 61 104-165 55-116 (300)
245 PRK06155 crotonobetaine/carnit 30.2 2.8E+02 0.006 30.3 9.5 70 276-350 65-134 (542)
246 PRK00174 acetyl-CoA synthetase 30.1 2.9E+02 0.0063 30.9 9.9 98 238-343 80-179 (637)
247 PRK10946 entE enterobactin syn 30.1 4.1E+02 0.009 28.8 10.9 96 67-166 180-281 (536)
248 cd01519 RHOD_HSP67B2 Member of 29.7 1.2E+02 0.0026 24.3 5.1 41 96-136 52-92 (106)
249 PF00464 SHMT: Serine hydroxym 29.6 6.7E+02 0.015 26.2 12.0 62 107-168 107-180 (399)
250 PRK08633 2-acyl-glycerophospho 29.5 4.6E+02 0.01 31.8 12.1 97 67-166 780-881 (1146)
251 PRK05994 O-acetylhomoserine am 29.5 4.4E+02 0.0096 27.8 10.5 71 107-179 99-170 (427)
252 PRK07787 acyl-CoA synthetase; 29.4 5.9E+02 0.013 26.9 11.8 95 67-166 126-225 (471)
253 TIGR03392 FeS_syn_CsdA cystein 29.4 4.2E+02 0.0092 27.4 10.4 73 106-179 102-179 (398)
254 cd07050 BMC_EutL_repeat2 ethan 29.2 1.1E+02 0.0024 23.4 4.0 43 99-141 3-46 (87)
255 PRK13383 acyl-CoA synthetase; 29.2 2.5E+02 0.0054 30.3 8.9 69 276-349 79-147 (516)
256 TIGR02275 DHB_AMP_lig 2,3-dihy 29.2 5.3E+02 0.012 27.8 11.6 96 67-166 181-282 (527)
257 TIGR01734 D-ala-DACP-lig D-ala 29.1 5.8E+02 0.013 27.1 11.8 97 67-166 139-241 (502)
258 PLN02654 acetate-CoA ligase 29.0 3E+02 0.0066 31.0 9.8 81 258-343 119-201 (666)
259 TIGR02539 SepCysS Sep-tRNA:Cys 28.7 5E+02 0.011 26.6 10.6 69 108-179 88-168 (370)
260 cd06451 AGAT_like Alanine-glyo 28.7 5.1E+02 0.011 26.2 10.7 71 107-178 71-145 (356)
261 PRK09265 aminotransferase AlaT 28.5 6.8E+02 0.015 25.9 13.9 55 107-165 116-176 (404)
262 PRK06087 short chain acyl-CoA 28.3 6.4E+02 0.014 27.3 12.0 94 67-164 185-283 (547)
263 PRK07868 acyl-CoA synthetase; 28.3 4.6E+02 0.0099 31.4 11.4 62 104-166 640-703 (994)
264 KOG0633 Histidinol phosphate a 28.2 93 0.002 29.9 4.4 75 101-175 101-178 (375)
265 PLN02855 Bifunctional selenocy 28.1 4.9E+02 0.011 27.3 10.7 73 106-179 118-195 (424)
266 TIGR01328 met_gam_lyase methio 27.5 5E+02 0.011 27.0 10.3 72 107-180 95-167 (391)
267 PLN02556 cysteine synthase/L-3 27.4 4.2E+02 0.0091 27.4 9.5 62 104-165 103-165 (368)
268 cd06453 SufS_like Cysteine des 27.4 4.4E+02 0.0095 26.9 10.0 71 108-179 86-161 (373)
269 cd02070 corrinoid_protein_B12- 27.4 3.8E+02 0.0081 24.8 8.5 116 264-382 61-183 (201)
270 PRK07514 malonyl-CoA synthase; 27.3 3.1E+02 0.0066 29.4 9.2 69 276-349 47-115 (504)
271 PRK09177 xanthine-guanine phos 27.3 4.4E+02 0.0095 23.3 10.1 42 84-127 8-49 (156)
272 PRK07811 cystathionine gamma-s 26.9 3.7E+02 0.0081 27.9 9.3 71 107-179 97-168 (388)
273 TIGR03590 PseG pseudaminic aci 26.8 4.1E+02 0.0089 26.1 9.1 76 84-166 10-89 (279)
274 PRK15348 type III secretion sy 26.7 3.5E+02 0.0077 26.1 8.1 70 513-584 109-184 (249)
275 TIGR01324 cysta_beta_ly_B cyst 26.6 4.2E+02 0.0091 27.4 9.5 75 101-179 81-157 (377)
276 PRK10717 cysteine synthase A; 26.6 4.5E+02 0.0098 26.5 9.6 63 103-166 56-119 (330)
277 KOG1176 Acyl-CoA synthetase [L 26.6 3.5E+02 0.0076 29.6 9.1 90 257-351 43-136 (537)
278 PLN00175 aminotransferase fami 26.5 5.1E+02 0.011 27.1 10.4 62 107-172 136-202 (413)
279 PRK07867 acyl-CoA synthetase; 26.5 7.3E+02 0.016 26.9 12.0 94 67-164 150-248 (529)
280 PRK12414 putative aminotransfe 26.5 7.2E+02 0.016 25.6 14.8 55 107-165 111-170 (384)
281 PRK05851 long-chain-fatty-acid 26.4 5.6E+02 0.012 27.7 11.1 93 67-162 150-250 (525)
282 KOG3055 Phosphoribosylformimin 26.4 3.6E+02 0.0078 24.5 7.4 67 95-165 46-112 (263)
283 PRK11657 dsbG disulfide isomer 26.4 2.6E+02 0.0056 27.1 7.4 79 483-569 58-145 (251)
284 PRK05752 uroporphyrinogen-III 26.2 4.9E+02 0.011 25.0 9.5 13 240-252 181-193 (255)
285 PLN00011 cysteine synthase 26.2 5E+02 0.011 26.2 9.8 64 102-166 59-124 (323)
286 COG4009 Uncharacterized protei 26.2 3E+02 0.0064 21.0 5.7 67 84-161 8-77 (88)
287 PRK08276 long-chain-fatty-acid 26.1 3.3E+02 0.0071 29.2 9.2 68 276-348 30-97 (502)
288 PLN02723 3-mercaptopyruvate su 26.0 1.1E+02 0.0024 30.8 5.0 52 85-136 238-295 (320)
289 TIGR01137 cysta_beta cystathio 25.9 4.3E+02 0.0092 28.1 9.8 62 103-165 54-116 (454)
290 cd06448 L-Ser-dehyd Serine deh 25.8 4.3E+02 0.0094 26.5 9.2 61 104-165 45-105 (316)
291 PRK04870 histidinol-phosphate 25.5 3.9E+02 0.0084 27.2 9.1 65 108-175 103-171 (356)
292 PRK08249 cystathionine gamma-s 25.4 5.6E+02 0.012 26.8 10.3 71 107-179 100-171 (398)
293 PLN02574 4-coumarate--CoA liga 25.4 3.4E+02 0.0074 29.7 9.2 68 277-349 87-154 (560)
294 TIGR03235 DNA_S_dndA cysteine 25.4 7.1E+02 0.015 25.1 12.3 77 102-179 79-160 (353)
295 PRK07810 O-succinylhomoserine 25.3 6E+02 0.013 26.5 10.5 73 107-181 106-179 (403)
296 PF07994 NAD_binding_5: Myo-in 25.3 5.6E+02 0.012 25.5 9.5 76 87-166 127-232 (295)
297 TIGR01138 cysM cysteine syntha 25.2 5.8E+02 0.013 25.2 9.9 61 104-165 52-113 (290)
298 COG0520 csdA Selenocysteine ly 25.2 8.1E+02 0.017 25.7 12.8 87 95-183 97-188 (405)
299 PRK07008 long-chain-fatty-acid 25.2 3.6E+02 0.0079 29.3 9.4 98 67-166 174-276 (539)
300 COG1064 AdhP Zn-dependent alco 25.1 1.3E+02 0.0028 30.5 5.2 61 101-165 158-218 (339)
301 PRK14012 cysteine desulfurase; 25.1 6.7E+02 0.015 26.0 11.0 69 107-176 91-163 (404)
302 PRK13355 bifunctional HTH-doma 25.1 9E+02 0.02 26.2 15.4 12 108-119 230-241 (517)
303 PRK13391 acyl-CoA synthetase; 25.1 4.7E+02 0.01 28.0 10.2 99 238-348 10-110 (511)
304 KOG0023 Alcohol dehydrogenase, 25.0 3.1E+02 0.0066 27.6 7.4 62 101-165 173-234 (360)
305 TIGR03208 cyc_hxne_CoA_lg cycl 24.8 8.1E+02 0.018 26.4 12.0 96 67-166 193-293 (538)
306 PRK06814 acylglycerophosphoeth 24.5 7.1E+02 0.015 30.2 12.4 97 67-166 791-892 (1140)
307 PRK06839 acyl-CoA synthetase; 24.4 3.9E+02 0.0084 28.5 9.3 87 258-349 26-115 (496)
308 TIGR01979 sufS cysteine desulf 24.4 6.3E+02 0.014 26.1 10.6 73 106-179 104-181 (403)
309 PRK11493 sseA 3-mercaptopyruva 24.1 1.3E+02 0.0028 29.6 5.0 53 84-136 200-257 (281)
310 PRK10595 SOS cell division inh 24.0 3E+02 0.0066 24.6 6.6 50 99-148 70-122 (164)
311 TIGR01326 OAH_OAS_sulfhy OAH/O 24.0 6.4E+02 0.014 26.5 10.5 69 107-177 93-162 (418)
312 PRK05605 long-chain-fatty-acid 24.0 3.5E+02 0.0076 29.6 9.0 68 276-348 76-143 (573)
313 PRK08751 putative long-chain f 24.0 3.2E+02 0.0069 29.8 8.7 68 276-348 70-137 (560)
314 PRK02731 histidinol-phosphate 23.9 7.7E+02 0.017 25.0 15.0 68 107-178 105-175 (367)
315 cd06454 KBL_like KBL_like; thi 23.8 4.3E+02 0.0094 26.5 9.1 67 108-178 83-153 (349)
316 PRK09295 bifunctional cysteine 23.8 5.5E+02 0.012 26.7 10.0 75 106-181 109-188 (406)
317 COG1424 BioW Pimeloyl-CoA synt 23.6 91 0.002 28.2 3.3 49 442-501 168-218 (239)
318 PLN03102 acyl-activating enzym 23.6 3.3E+02 0.0072 30.0 8.7 68 276-348 58-125 (579)
319 TIGR00936 ahcY adenosylhomocys 23.4 4.3E+02 0.0094 27.7 8.7 57 107-163 29-87 (406)
320 PRK06348 aspartate aminotransf 23.3 6.3E+02 0.014 26.0 10.3 55 107-165 110-170 (384)
321 PF02073 Peptidase_M29: Thermo 23.1 1.8E+02 0.0038 30.5 5.9 50 91-140 3-56 (398)
322 cd00640 Trp-synth-beta_II Tryp 23.1 6.5E+02 0.014 23.9 9.8 64 102-166 42-105 (244)
323 PF07210 DUF1416: Protein of u 22.9 2.5E+02 0.0054 21.8 5.0 20 420-439 16-35 (85)
324 PLN02242 methionine gamma-lyas 22.9 5.8E+02 0.013 26.8 9.9 71 107-179 112-185 (418)
325 cd00614 CGS_like CGS_like: Cys 22.3 6.8E+02 0.015 25.7 10.2 71 107-179 76-147 (369)
326 PRK08114 cystathionine beta-ly 22.3 8.2E+02 0.018 25.5 10.6 75 107-183 98-173 (395)
327 PF02729 OTCace_N: Aspartate/o 22.2 5.2E+02 0.011 22.4 9.2 58 107-165 36-102 (142)
328 PLN03026 histidinol-phosphate 22.1 6.8E+02 0.015 25.8 10.2 66 107-175 124-193 (380)
329 PRK10252 entF enterobactin syn 22.0 7.6E+02 0.017 30.4 12.2 97 67-166 596-698 (1296)
330 PF06543 Lac_bphage_repr: Lact 21.8 75 0.0016 21.4 1.8 24 365-388 22-45 (49)
331 TIGR01976 am_tr_V_VC1184 cyste 21.5 4.5E+02 0.0097 27.2 8.8 72 107-179 101-178 (397)
332 KOG1138 Predicted cleavage and 21.4 1.4E+02 0.003 31.6 4.5 89 69-169 389-478 (653)
333 PRK03321 putative aminotransfe 21.3 7E+02 0.015 25.2 10.1 66 107-176 95-164 (352)
334 PF05221 AdoHcyase: S-adenosyl 21.2 4.6E+02 0.0099 25.6 7.7 55 108-162 41-97 (268)
335 PF09153 DUF1938: Domain of un 21.2 1.6E+02 0.0034 22.7 3.6 47 70-120 15-62 (86)
336 COG0626 MetC Cystathionine bet 21.2 9.6E+02 0.021 25.1 11.1 74 107-181 99-173 (396)
337 PRK07671 cystathionine beta-ly 21.0 4.3E+02 0.0092 27.3 8.3 71 107-179 85-156 (377)
338 cd06452 SepCysS Sep-tRNA:Cys-t 20.8 8E+02 0.017 24.9 10.4 68 107-177 80-159 (361)
339 PRK06460 hypothetical protein; 20.8 9.1E+02 0.02 24.9 10.7 71 107-179 81-152 (376)
340 PHA02553 6 baseplate wedge sub 20.5 2.5E+02 0.0055 30.9 6.5 64 507-570 311-377 (611)
341 PTZ00433 tyrosine aminotransfe 20.5 9.7E+02 0.021 24.9 12.6 10 109-118 127-136 (412)
342 PRK07768 long-chain-fatty-acid 20.5 8.2E+02 0.018 26.4 11.0 94 67-163 150-252 (545)
343 PRK07049 methionine gamma-lyas 20.4 8.7E+02 0.019 25.6 10.6 71 107-177 119-194 (427)
344 PLN02494 adenosylhomocysteinas 20.4 5.3E+02 0.011 27.6 8.6 57 106-162 42-100 (477)
345 cd01561 CBS_like CBS_like: Thi 20.3 7.4E+02 0.016 24.3 9.7 64 102-166 44-108 (291)
346 PRK05968 hypothetical protein; 20.3 8.6E+02 0.019 25.2 10.4 56 107-165 99-155 (389)
347 TIGR01264 tyr_amTase_E tyrosin 20.1 9.7E+02 0.021 24.7 11.8 11 108-118 117-127 (401)
348 cd07078 ALDH NAD(P)+ dependent 20.1 6E+02 0.013 26.7 9.5 36 299-334 115-150 (432)
349 PF04865 Baseplate_J: Baseplat 20.0 1.9E+02 0.004 27.7 5.1 56 509-567 117-173 (243)
No 1
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.4e-106 Score=900.36 Aligned_cols=629 Identities=91% Similarity=1.534 Sum_probs=548.8
Q ss_pred ChHhhhhChHHHHHHHHhccccccccc--cccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcC
Q 006776 1 MYKRSVEDPAGFWADIASEFYWKEKWG--QRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAN 78 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~ 78 (631)
||+||++||+.||.++|+.++|.++|+ + |++.+..+..++++++||+||++|+++|+|++|++..+|+++|+++..+
T Consensus 35 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~wf~g~~~N~~~~~l~~~~~~~~~~~~Al~~~~~ 113 (666)
T PLN02654 35 MYKRSVDDPAGFWSDIASQFYWKQKWEGDE-VCSENLDVRKGPISIEWFKGGKTNICYNCLDRNVEAGNGDKIAIYWEGN 113 (666)
T ss_pred HHHHHhcCHHHHHHHHHHhCCeecCCCcce-EeccCCCcccCCccccccCCCEeeHHHHHHHHhhccCCCCCEEEEEEcC
Confidence 589999999999999999999999875 5 7643444544556789999999999999999998634899999998765
Q ss_pred CCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCc
Q 006776 79 DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKP 158 (631)
Q Consensus 79 ~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~ 158 (631)
+.+..+++||+||.++|.++|++|+++|+++||+|++++||++++++++|||+++|++++|++++++.+++..+|++++|
T Consensus 114 ~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~ 193 (666)
T PLN02654 114 EPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKP 193 (666)
T ss_pred CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCc
Confidence 43556899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCCCCCCceecC
Q 006776 159 KVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVD 238 (631)
Q Consensus 159 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (631)
+++|+++...++.+.++++..++.++.........+..++..............+...++.+|+++....+...+...++
T Consensus 194 ~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (666)
T PLN02654 194 KVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYPTKCEVEWVD 273 (666)
T ss_pred eEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCCCCCCceecC
Confidence 99999998888888888888887766543111122333443332111000011222334556776655443334455678
Q ss_pred CCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCC
Q 006776 239 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAP 318 (631)
Q Consensus 239 ~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~ 318 (631)
++|+++|+|||||||.||||+++|++++..........++++++|++++++|++|++|+.+.++++|+.|++++++++.+
T Consensus 274 ~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~ 353 (666)
T PLN02654 274 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAP 353 (666)
T ss_pred CCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCC
Confidence 89999999999999999999999999877776666778899999999999999999999888899999999999999888
Q ss_pred CCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccc
Q 006776 319 TYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWW 398 (631)
Q Consensus 319 ~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg 398 (631)
.++++..+|++|+++++|+++++|++++.|++.........++++||.++++||++++++++++.+.+|..++++.+.||
T Consensus 354 ~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg 433 (666)
T PLN02654 354 NYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWW 433 (666)
T ss_pred CCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceecccc
Confidence 88899999999999999999999999999998765444567889999999999999999999999999866689999999
Q ss_pred cccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCC
Q 006776 399 QTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG 478 (631)
Q Consensus 399 ~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g 478 (631)
+||+|+..+...++..+.+++++|+|++|++++|+|++|++++.++.|||++++|||+++.|||+|++++...|+..++|
T Consensus 434 ~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g 513 (666)
T PLN02654 434 QTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAG 513 (666)
T ss_pred ccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCC
Confidence 99999877655544345678999999999999999999999998889999999999999999999999999988887899
Q ss_pred eEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHH
Q 006776 479 YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEE 558 (631)
Q Consensus 479 ~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~ 558 (631)
||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+||+|.+++|++++++..|+.+++||+++++...+++
T Consensus 514 ~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~ 593 (666)
T PLN02654 514 YYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEE 593 (666)
T ss_pred EEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999899999999999988776777
Q ss_pred HHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHHHHHHhhhc
Q 006776 559 LRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALAD 630 (631)
Q Consensus 559 ~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (631)
+.++|+++|+++|+++++|+.|+++++||+|+|||++|+.||+++.+...++++.+|++||+++++|++++|
T Consensus 594 l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (666)
T PLN02654 594 LRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALAD 665 (666)
T ss_pred HHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCCCCCCCCcccccCHHHHHHHHHhhc
Confidence 888999999999999999999999999999999999999999999886557889999999999999999876
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2.4e-106 Score=838.54 Aligned_cols=521 Identities=47% Similarity=0.773 Sum_probs=486.8
Q ss_pred cccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCChHH
Q 006776 45 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMEL 123 (631)
Q Consensus 45 ~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gv~~gd~V~i~~~n~~~~ 123 (631)
+||.++++|+++|+++||..+..+++.|++|+++.++. +.+||+||+++|+++|+.|++ .|+ +||||+|+|||.+|+
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~~~~~~~~aii~~~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~ 78 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLEADRPDDTAIIFDGEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA 78 (528)
T ss_pred CCcCCceeechhhhhhhhhhccCCCceEEEEEcCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH
Confidence 59999999999999999997556899999999876433 999999999999999999986 678 999999999999999
Q ss_pred HHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecC
Q 006776 124 PIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQ 203 (631)
Q Consensus 124 ~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~ 203 (631)
+++||||+++|||++|+++.++++++.+|++++++|++|+++...++++.+.++..+++++.. ++++.+.
T Consensus 79 ~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~----------~iv~~r~ 148 (528)
T COG0365 79 VIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS----------VVVVPRL 148 (528)
T ss_pred HHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc----------eEEeccc
Confidence 999999999999999999999999999999999999999999999999999998887766432 4444432
Q ss_pred CccccccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCc
Q 006776 204 SAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSD 283 (631)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d 283 (631)
. ++|++.++.....++++.++++||++|+|||||||+||||+|+|++++..+.......+++.++|
T Consensus 149 ~--------------~~~~~~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~D 214 (528)
T COG0365 149 G--------------LWYDEAVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGD 214 (528)
T ss_pred c--------------ccHHHHhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCC
Confidence 1 67888888777777777799999999999999999999999999999999999999899999999
Q ss_pred EEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCc
Q 006776 284 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKS 363 (631)
Q Consensus 284 ~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~ 363 (631)
++|++++++|++|+++.++++|++|++++++++.|.+ +++++|++|+++++|.++++|+.+++|++.+. .+++++++
T Consensus 215 v~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~-~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~--~~~~dlss 291 (528)
T COG0365 215 RFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFY-SPERLWEALEKYKVTIFGTSPTFLRRLMKLGL--GEPYDLSS 291 (528)
T ss_pred EEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCC-CHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC--cccccchh
Confidence 9999999999999999999999999999999999988 89999999999999999999999999999976 67889999
Q ss_pred eeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCC
Q 006776 364 LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE 443 (631)
Q Consensus 364 lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g 443 (631)
||.+.++||||+++.++|+++.+| ++|.+.||+||+|++.+...+ +.++++.|+|+||++++|+|++|++++.|
T Consensus 292 Lr~~~SaGEPLnpe~~~w~~~~~g---~~i~d~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~g~~~~~~ 365 (528)
T COG0365 292 LRVLGSAGEPLNPEAFEWFYSALG---VWILDIYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDEGNPVPPG 365 (528)
T ss_pred heeeeccCCCCCHHHHHHHHHHhC---CCEeccccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCCCCcCCCC
Confidence 999999999999999999999998 899999999999977665554 45677779999999999999999999999
Q ss_pred cceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcC
Q 006776 444 CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSH 523 (631)
Q Consensus 444 ~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~ 523 (631)
+ |+|+++.|||+++.+||+|++++.+.|+.. ||.|||.+++|+||+++|+||+||+||++|+||+|.|||++|.+|
T Consensus 366 ~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~---~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 366 V-GELVVRLPWPGMALTYWNDPERYKEAYFGR---WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred c-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc---eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhC
Confidence 8 999999999999999999999999999863 999999999999999999999999999999999999999999999
Q ss_pred cccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHH
Q 006776 524 PQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 603 (631)
Q Consensus 524 ~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~ 603 (631)
|.|.||+|||+||+.+|+.+++||+++++...+ +++++|++++++.+++++.|+.|+++++||||+||||+|+.||+++
T Consensus 442 P~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~-~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~ 520 (528)
T COG0365 442 PAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPN-ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKIL 520 (528)
T ss_pred cceeeeEEEeccCCCCCcEEEEEEEecCCCChH-HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHH
Confidence 999999999999999999999999999999888 9999999999999999999999999999999999999999999999
Q ss_pred hc
Q 006776 604 SR 605 (631)
Q Consensus 604 ~~ 605 (631)
.+
T Consensus 521 ~~ 522 (528)
T COG0365 521 HK 522 (528)
T ss_pred hh
Confidence 84
No 3
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-104 Score=824.66 Aligned_cols=607 Identities=57% Similarity=0.949 Sum_probs=555.4
Q ss_pred ChHhhhhChHHHHHHHHhccccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCC
Q 006776 1 MYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDP 80 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~ 80 (631)
+|++|++||+.||..+++.++|..++.+ . +. ......+.++||+|+.+|+++|+++++...+.++++|++|+...+
T Consensus 16 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~~w~~g~~ln~~~n~~~~~~~~~~~~~~a~~~~~~~~ 91 (626)
T KOG1175|consen 16 FYRFSVEDPERFWGEVAKELHWKFPWPR-C-NK--DENKGNPFTKWFPGAFLNACYNCLDRHIKEKGGDKVAIIFEGNEG 91 (626)
T ss_pred HHhhcccCHHHHHHHhhhhhhcccCccc-c-cc--ccccCCCCccccccchhhhhHhhhhhhhhhcCCCCcEEEEEecCC
Confidence 4889999999999999999876554443 2 11 111223357999999999999999999874558999999998776
Q ss_pred CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceE
Q 006776 81 GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKV 160 (631)
Q Consensus 81 ~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ 160 (631)
+....+||.||.+++.++|..|.+.|+++||+|+++||+.+++++++|||+++|++++++..+++++.+..+|++++||+
T Consensus 92 ~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~ 171 (626)
T KOG1175|consen 92 GDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKV 171 (626)
T ss_pred CceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCE
Confidence 66666999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCCCCCCceecCCC
Q 006776 161 VITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAE 240 (631)
Q Consensus 161 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (631)
+++.+...+..+.++++..+++++..+..........+.+.+. ..+++|++.+.......+++..+.+
T Consensus 172 i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~------------~~d~~~~~~~~~a~~~~~~~~~~~e 239 (626)
T KOG1175|consen 172 IITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRR------------NRDLFWSLELKKASPEHPCVPVKAE 239 (626)
T ss_pred EEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecc------------cccccHHHHhhhcCCCCCceecCcc
Confidence 9999999999999999999999887764332333333333332 1277888888888888889999999
Q ss_pred CCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCC
Q 006776 241 DPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTY 320 (631)
Q Consensus 241 ~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~ 320 (631)
||.+|+|||||||.||+++|++++++...+.....+++++++|++|++++++|++|+++.++++|++|++++++++.|.
T Consensus 240 dpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~- 318 (626)
T KOG1175|consen 240 DPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPF- 318 (626)
T ss_pred CceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccc
Q 006776 321 PDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQT 400 (631)
Q Consensus 321 ~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~t 400 (631)
++..+|+++.+|++|++++.|++++.|.+........++.++||.+.++||++.++.++|+.+.++. -+|++.||+|
T Consensus 319 -~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~--~pv~e~~~qt 395 (626)
T KOG1175|consen 319 -DPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGL--DPIYETYGQT 395 (626)
T ss_pred -ChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCc--cchhhceeee
Confidence 8999999999999999999999999999988777777777889999999999999999999999984 2899999999
Q ss_pred cccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCC-cceeEEEecCCC-cccccccCCchhhhhhccccCCC
Q 006776 401 ETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE-CSGYLCIKSSWP-GAFRTLYGDHERYETTYFKPFPG 478 (631)
Q Consensus 401 E~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g-~~Gel~v~~~~p-~~~~gy~~~~~~~~~~~~~~~~g 478 (631)
|+|+.++...++..+.++++++.|++|+.+.|+|++|+.++++ +.|+|+++.+|| +++++||+|++++...|+.+++|
T Consensus 396 EtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg 475 (626)
T KOG1175|consen 396 ETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPG 475 (626)
T ss_pred ccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCc
Confidence 9999988877765578999999999999999999999999886 899999999998 99999999999999999999999
Q ss_pred eEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHH
Q 006776 479 YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEE 558 (631)
Q Consensus 479 ~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~ 558 (631)
+|+|||.+++|+||+++++||+||+||++|+|+++.|||++|.+||.|.|++|||.+++.+||.+++||+++++....++
T Consensus 476 ~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~ 555 (626)
T KOG1175|consen 476 YYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQ 555 (626)
T ss_pred eEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred HHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHHHHHHhhh
Q 006776 559 LRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 629 (631)
Q Consensus 559 ~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (631)
+.++|+.++|+.+++++.|+.|+++++||||+|||++|+.||+++.++ ++++.++++||++++++++..
T Consensus 556 L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~--~~~d~st~~dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 556 LTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK--AVGDTSTLADPSVIDHLRSIL 624 (626)
T ss_pred HHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC--ccccccccCChHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999998 788999999999999998764
No 4
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2.5e-101 Score=857.57 Aligned_cols=612 Identities=62% Similarity=1.105 Sum_probs=545.1
Q ss_pred ChHhhhhChHHHHHHHHhc-cccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCC
Q 006776 1 MYKRSVEDPAGFWADIASE-FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAND 79 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~ 79 (631)
||+||++||+.||.++|+. ++|+++|++ +++.+ . +++++||+||++|+++|+|++++. .+|+++|+++.+++
T Consensus 10 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~-~~~~~-~----~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~Al~~~~~~ 82 (625)
T TIGR02188 10 LYEESIEDPDKFWAKLARELLDWFKPFTK-VLDWS-F----PPFYKWFVGGELNVSYNCVDRHLE-ARPDKVAIIWEGDE 82 (625)
T ss_pred HHHHHhcCHHHHHHHHHHhcCceecCCce-eecCC-C----CCCCeeCCCCEEEHHHHHHHHhhc-cCCCCeEEEEEcCC
Confidence 5899999999999999998 999999999 87322 1 235799999999999999999987 79999999997653
Q ss_pred CCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCce
Q 006776 80 PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPK 159 (631)
Q Consensus 80 ~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~ 159 (631)
.+..+++||+||.+++.++|++|+++|+++||+|+++++|++++++++|||+++|++++|++++++.+++.+++++++++
T Consensus 83 ~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~ 162 (625)
T TIGR02188 83 PGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAK 162 (625)
T ss_pred CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCC
Confidence 35578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcccCCcccccHHHHHHHHHHhhhcCC-CccEEEEEecCCccccccCcCCCCCccchhhhcccCCCCCCceecC
Q 006776 160 VVITSNAVKRGPKAIHLKDIVDAALDECAKSGI-SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVD 238 (631)
Q Consensus 160 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (631)
++|+++...++++.+++...+++++..+ + .+++++++..... ...+....+.+|++++........+....
T Consensus 163 ~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (625)
T TIGR02188 163 LVITADEGLRGGKVIPLKAIVDEALEKC----PVSVEHVLVVRRTGN----PVPWVEGRDVWWHDLMAKASAYCEPEPMD 234 (625)
T ss_pred EEEEcCccccCCcccchHHHHHHHHHhC----CCCccEEEEEcCCCC----CcCccccccccHHHHHhhcCCCCCceecC
Confidence 9999998888888888888888777665 5 5777777654332 11222334556777665544444555678
Q ss_pred CCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCC
Q 006776 239 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAP 318 (631)
Q Consensus 239 ~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~ 318 (631)
++++++|+|||||||.||||+++|++++.+........++++++|++++.++++|++|+.+.++++|+.|++++++++.+
T Consensus 235 ~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~ 314 (625)
T TIGR02188 235 SEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTP 314 (625)
T ss_pred CCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCC
Confidence 89999999999999999999999999877776666777899999999999999999998888899999999999999888
Q ss_pred CCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccc
Q 006776 319 TYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWW 398 (631)
Q Consensus 319 ~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg 398 (631)
..+++..++++|+++++|+++++|++++.|.+.......+.++++||.++++|+++++++++++.+.++..++++++.||
T Consensus 315 ~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG 394 (625)
T TIGR02188 315 TYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWW 394 (625)
T ss_pred CCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEeccc
Confidence 77899999999999999999999999999998765444556789999999999999999999999999866689999999
Q ss_pred cccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccC-CCcceeEEEecCCCcccccccCCchhhhhhccccCC
Q 006776 399 QTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIE-GECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFP 477 (631)
Q Consensus 399 ~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~-~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~ 477 (631)
+||+|+.++...++....+++++|+|++|++++|+|++|++++ .|+.|||++++|+|+++.|||++++++...|+...+
T Consensus 395 ~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~ 474 (625)
T TIGR02188 395 QTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFP 474 (625)
T ss_pred ccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCC
Confidence 9999987665544433467889999999999999999999999 899999999999999999999999999998887778
Q ss_pred CeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcH
Q 006776 478 GYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSE 557 (631)
Q Consensus 478 g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~ 557 (631)
|||+|||+|++|+||+++|+||+||+||++|++|+|.|||++|.+||+|.+++|++++++..|+.++++|+++++...++
T Consensus 475 g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~ 554 (625)
T TIGR02188 475 GYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDD 554 (625)
T ss_pred CEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999989999999999998877666
Q ss_pred HHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHHHHHHh
Q 006776 558 ELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIA 627 (631)
Q Consensus 558 ~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (631)
++.++|+++|+++|+++++|+.|+++++||+|++||++|+.|+++++++.....+.++++||+++|+|++
T Consensus 555 ~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 555 ELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEEEILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred HHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCcccccCHHHHHHHHh
Confidence 7788999999999999999999999999999999999999999999876444678999999999999975
No 5
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-99 Score=839.68 Aligned_cols=610 Identities=27% Similarity=0.450 Sum_probs=511.7
Q ss_pred ChHhhhhChHHHHHHHHhc-cccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhcc-CCCCeeEEEEEcC
Q 006776 1 MYKRSVEDPAGFWADIASE-FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEA-GLGDKVAIYWEAN 78 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~-~~~~~~A~~~~~~ 78 (631)
||+||++||+.||.++|+. ++|+++|++ |++.+ +++++||+||++|+++|+|++|+.. .+|+++|+++.++
T Consensus 13 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~-~~~~~------~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~~~~ 85 (647)
T PTZ00237 13 DSNYANSNPESFWDEVAKKYVHWDKMYDK-VYSGD------EIYPDWFKGGELNTCYNVLDIHVKNPLKRDQDALIYECP 85 (647)
T ss_pred HHHHHHcCHHHHHHHHHHhcCeeeCCccc-ccCCC------CCchhhCCCCeeeHHHHHHHHhhcccCCCCceEEEEEcC
Confidence 5899999999999999999 899999999 87421 2247999999999999999999852 2789999999765
Q ss_pred CCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCc
Q 006776 79 DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKP 158 (631)
Q Consensus 79 ~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~ 158 (631)
..+..+++||+||+++|.++|++|+++|+++||+|+++|||++++++++|||+++|++++|++++++.+++.++|++++|
T Consensus 86 ~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~ 165 (647)
T PTZ00237 86 YLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITP 165 (647)
T ss_pred CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCC
Confidence 43346789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccC----cC-CCCCccchhhhcccC-----
Q 006776 159 KVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENT----KW-QDGRDIWWQDVVPKY----- 228 (631)
Q Consensus 159 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~----- 228 (631)
+++|+++...++.+.+++.+.+.+++.... ..+++++++........... .. .......|++++...
T Consensus 166 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (647)
T PTZ00237 166 KLIITTNYGILNDEIITFTPNLKEAIELST---FKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQ 242 (647)
T ss_pred CEEEEcccceeCCceechHHHHHHHHhccc---CCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccccC
Confidence 999999887777777777777776654221 13456665532210000000 00 001234566654321
Q ss_pred CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcC
Q 006776 229 PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNG 308 (631)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G 308 (631)
.....+...+++++++|+|||||||.||||+++|++++..........++..+++++++.++++|++++. .++++|+.|
T Consensus 243 ~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G 321 (647)
T PTZ00237 243 SPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHG-FLYGSLSLG 321 (647)
T ss_pred CCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHH-HHHHHHhCC
Confidence 1123345678899999999999999999999999986666555445566788899999999999998764 578999999
Q ss_pred ceEEEecCCCCCCC--hhHHHHHHHHhCCcEEeecHHHHHHHHhcCCcc---ccccCCCceeEEEEccCCCCHhHHHHHH
Q 006776 309 ASVVVFEGAPTYPD--SGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY---VTRYSRKSLRVLGSVGEPINPSAWRWFF 383 (631)
Q Consensus 309 ~~~vl~~~~~~~~~--~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~---~~~~~l~~lr~v~~~Ge~l~~~~~~~~~ 383 (631)
++++++++.+..++ ++.+|+.|+++++|+++++|++++.|++..... ...+++++||.+++||++++++++++++
T Consensus 322 ~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~ 401 (647)
T PTZ00237 322 NTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIE 401 (647)
T ss_pred cEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHHH
Confidence 99999987543322 688999999999999999999999999864321 2456789999999999999999999999
Q ss_pred HHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCC-ccccccc
Q 006776 384 NVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP-GAFRTLY 462 (631)
Q Consensus 384 ~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p-~~~~gy~ 462 (631)
+.+| +++++.||+||++++++...+ ......+++|+|+||++++|+|++|++++.|+.|||++++|+| +++.|||
T Consensus 402 ~~~g---~~i~~~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~GEl~v~~p~~p~~~~gy~ 477 (647)
T PTZ00237 402 NKLK---IKSSRGYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSILSEDGKELNVNEIGEVAFKLPMPPSFATTFY 477 (647)
T ss_pred HhcC---CCEEeeechHHhChhhhccCC-CCCCCCCCCccCcCCceEEEECCCCCCCCCCCceEEEEeccCCchhhCcee
Confidence 9987 789999999999976554332 1123458999999999999999999999999999999999874 9999999
Q ss_pred CCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCee
Q 006776 463 GDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQG 542 (631)
Q Consensus 463 ~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~ 542 (631)
++++++.. ++..++|||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+||.|.|++|+|++++..++.
T Consensus 478 ~~~~~~~~-~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~ 556 (647)
T PTZ00237 478 KNDEKFKQ-LFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNV 556 (647)
T ss_pred CCHHHHHH-HHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCE
Confidence 99998874 56667899999999999999999999999999999999999999999999999999999999999998999
Q ss_pred EEEEEEeCCCC---CCc-HHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCC
Q 006776 543 IYAFVTLVEGV---PYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLAD 618 (631)
Q Consensus 543 ~~~~v~~~~~~---~~~-~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~ 618 (631)
+++||+++++. ..+ +++.++|+++++++|+++++|+.|+++++||+|+|||++|+.||+++.+. +..++++++|
T Consensus 557 ~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~--~~~~~~~~~~ 634 (647)
T PTZ00237 557 PIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDS--NYQLPDNVND 634 (647)
T ss_pred EEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCC--CCCCCccccC
Confidence 99999998542 222 46778999999999999999999999999999999999999999999875 4667899999
Q ss_pred hHHHHHHHhh
Q 006776 619 PGVVDQLIAL 628 (631)
Q Consensus 619 ~~~~~~~~~~ 628 (631)
|+++++|++.
T Consensus 635 ~~~~~~~~~~ 644 (647)
T PTZ00237 635 SEIFYKIKEL 644 (647)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 6
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.9e-98 Score=831.71 Aligned_cols=610 Identities=39% Similarity=0.710 Sum_probs=527.6
Q ss_pred ChHhhhhChHHHHHHHHhccccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCC
Q 006776 1 MYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDP 80 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~ 80 (631)
||+||++||+.||.++|+.++|+++|++ +++.+ .+++++||+||++|+++|++++|+. .+|+++|+++.+++.
T Consensus 6 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~Al~~~~~~~ 78 (628)
T TIGR02316 6 FYQRSIEQPEAFWAEQARRIDWQTPPQR-ILDYS-----NPPFARWFAGGRTNLCHNALDRHLD-ERGEQLALVTVSSET 78 (628)
T ss_pred HHHHHhcCHHHHHHHHHHhCCeecCCcc-cccCC-----CCCcCccCCCCEeeHHHHHHHHHhC-cCCCCeEEEEEcCCC
Confidence 5899999999999999999999999999 87322 1235799999999999999999987 799999999875433
Q ss_pred CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceE
Q 006776 81 GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKV 160 (631)
Q Consensus 81 ~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ 160 (631)
+..+++||+||+++|.++|++|+++|+++||+|+++++|++++++++|||+++|++++|++++++.+++.++|++++|++
T Consensus 79 ~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ 158 (628)
T TIGR02316 79 GQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKL 158 (628)
T ss_pred CceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCC-CCCCceecCC
Q 006776 161 VITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDA 239 (631)
Q Consensus 161 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (631)
+|+++...++++.+.+...+++++.... ....++++++.... ........+..|.++..... ...+.....+
T Consensus 159 li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (628)
T TIGR02316 159 IVSADAGMRGGKVIPYKPLLDAAIAEAQ---HPPPHVLLVDRGLA----PMRLIPGRDVDYAALRTQHEDAQVPVEWLES 231 (628)
T ss_pred EEECCccccCCcccccHHHHHHHHHhcC---CCCCEEEEEeCCCC----CcCcccCccccHHHHhhccccCCCCceecCC
Confidence 9999988888888888888877765442 34566776654321 11111223455666544322 2233445678
Q ss_pred CCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCC
Q 006776 240 EDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPT 319 (631)
Q Consensus 240 ~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~ 319 (631)
+++++|+|||||||.||||+++|++++.+........++++++|++++.++++|++|+.+.++++|+.|++++++++.+.
T Consensus 232 ~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~ 311 (628)
T TIGR02316 232 NEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPT 311 (628)
T ss_pred CCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCC
Confidence 99999999999999999999999998777666666678999999999999999999988889999999999999998777
Q ss_pred CCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccccc
Q 006776 320 YPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQ 399 (631)
Q Consensus 320 ~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~ 399 (631)
.+++..++++|+++++|+++++|++++.|.+.........++++||.+++|||++++++++++++.++ .++++.||+
T Consensus 312 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~---~~~~~~yG~ 388 (628)
T TIGR02316 312 NPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLG---KPVIDNYWQ 388 (628)
T ss_pred CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHhC---CCEEecccc
Confidence 78999999999999999999999999999886543344567899999999999999999999999987 689999999
Q ss_pred ccccceecccCCCC--CCCCCCCcCCCcCCCceEEeCC-CCcccCCCcceeEEEecCC-CcccccccCCchhhhhhcccc
Q 006776 400 TETGGFMITPLPGA--WPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSW-PGAFRTLYGDHERYETTYFKP 475 (631)
Q Consensus 400 tE~g~~~~~~~~~~--~~~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~-p~~~~gy~~~~~~~~~~~~~~ 475 (631)
||++..++...++. .....+++|.|++|++++|+|+ +|++++.|+.|||++++|+ ++++.+||++++++...|+..
T Consensus 389 TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~ 468 (628)
T TIGR02316 389 TETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSH 468 (628)
T ss_pred cccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhc
Confidence 99996554433321 2345688999999999999998 7999999999999999977 378899999999988888654
Q ss_pred C-CCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCC
Q 006776 476 F-PGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP 554 (631)
Q Consensus 476 ~-~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~ 554 (631)
+ +|||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+||+|.||+|++++++..|+.+++||+++++..
T Consensus 469 ~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~ 548 (628)
T TIGR02316 469 FKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDS 548 (628)
T ss_pred CCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcc
Confidence 4 469999999999999999999999999999999999999999999999999999999999989999999999987643
Q ss_pred C-----cHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHHHHHHhhh
Q 006776 555 Y-----SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 629 (631)
Q Consensus 555 ~-----~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (631)
. .+.+.++|+++++++|+++++|+.|+++++||+|+|||++|+.|++++++. +..+.++++||+++++|++..
T Consensus 549 ~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 626 (628)
T TIGR02316 549 AGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGR--DPGDLTTIDDPGALEQVRRAM 626 (628)
T ss_pred cccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCC--CCCCcccccCHHHHHHHHHHh
Confidence 2 235678999999999999999999999999999999999999999999875 467889999999999998764
No 7
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-97 Score=827.58 Aligned_cols=613 Identities=61% Similarity=1.089 Sum_probs=538.2
Q ss_pred ChHhhhhChHHHHHHHHhccccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCC
Q 006776 1 MYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDP 80 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~ 80 (631)
||++|+++|+.||.++|+.++|.++|++ +++. .+++++||+|+++|+++|+|+++++ .+|+++|+++.++++
T Consensus 22 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~------~~~~~~w~~~~~~n~~~~~l~~~~~-~~p~~~Al~~~~~~~ 93 (637)
T PRK00174 22 LYQESVEDPEGFWAEQAKRLDWFKPFDT-VLDW------NAPFIKWFEDGELNVSYNCLDRHLK-TRGDKVAIIWEGDDP 93 (637)
T ss_pred HHHHHhcCHHHHHHHHHHhcCeecCCcc-cccC------CCCCCccCCCCEeEHHHHHHHHhhc-cCCCCeEEEEECCCC
Confidence 5789999999999999999999999999 8732 1335799999999999999999987 799999999876543
Q ss_pred CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceE
Q 006776 81 GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKV 160 (631)
Q Consensus 81 ~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ 160 (631)
+..+++||+||++++.++|++|+++|+++||+|+++++|++++++++|||+++|++++|++++++.+++.++++++++++
T Consensus 94 ~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~ 173 (637)
T PRK00174 94 GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKL 173 (637)
T ss_pred CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCCCCCCceecCCC
Q 006776 161 VITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAE 240 (631)
Q Consensus 161 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (631)
+|+++...+..+.+.+...++.++..+ +.++.++++..... ...+....+.+|+++........+.....++
T Consensus 174 li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (637)
T PRK00174 174 VITADEGVRGGKPIPLKANVDEALANC----PSVEKVIVVRRTGG----DVDWVEGRDLWWHELVAGASDECEPEPMDAE 245 (637)
T ss_pred EEEcCccccCCcccchHHHHHHHHHhC----CCccEEEEEcCCCC----CcCcCCCCcccHHHHHhhcCCCCCccccCCC
Confidence 999988777777777777777666555 66777776654321 1122223455566665543333444556789
Q ss_pred CCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCC
Q 006776 241 DPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTY 320 (631)
Q Consensus 241 ~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~ 320 (631)
++++|+|||||||.||||+++|++++.+........++++++|++++.+|++|++++.+.++++|+.|++++++++.+..
T Consensus 246 d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~ 325 (637)
T PRK00174 246 DPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNY 325 (637)
T ss_pred CcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCC
Confidence 99999999999999999999999977766666666788999999999999999999888899999999999999887777
Q ss_pred CChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccc
Q 006776 321 PDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQT 400 (631)
Q Consensus 321 ~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~t 400 (631)
+++..++++|+++++|++.++|++++.|++.........++++||.++++||++++++++++.+.++..++++++.||+|
T Consensus 326 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~T 405 (637)
T PRK00174 326 PDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQT 405 (637)
T ss_pred CChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEeccccc
Confidence 78999999999999999999999999999875443345678999999999999999999999999986568999999999
Q ss_pred cccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeE
Q 006776 401 ETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYY 480 (631)
Q Consensus 401 E~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~ 480 (631)
|+++.++...++....+++++|+|++|++++|+|++|++++.|+.|||+|++++|+++.|||++++++...++...+|||
T Consensus 406 E~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~ 485 (637)
T PRK00174 406 ETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMY 485 (637)
T ss_pred ccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEE
Confidence 99987665444333456789999999999999999999999999999999999999999999999999888877678999
Q ss_pred ecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHH
Q 006776 481 FTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELR 560 (631)
Q Consensus 481 ~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 560 (631)
+|||+|++|+||+++++||+||+||++|++|+|.|||++|.+||+|.+++|++++++..|+.++++|++.++...++++.
T Consensus 486 ~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~ 565 (637)
T PRK00174 486 FTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELR 565 (637)
T ss_pred ECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999999988776566678
Q ss_pred HHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHHHHHHhhhc
Q 006776 561 KSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALAD 630 (631)
Q Consensus 561 ~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (631)
++|+++|+++|+++++|..|+++++||+|++||++|+.|+++++++. ...+.++++||+++++|++...
T Consensus 566 ~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 634 (637)
T PRK00174 566 KELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE-ILGDTSTLADPSVVEKLIEARQ 634 (637)
T ss_pred HHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC-CCCCcccccCHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999988754 5678899999999999988754
No 8
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2.6e-97 Score=824.84 Aligned_cols=604 Identities=23% Similarity=0.413 Sum_probs=517.3
Q ss_pred ChHhhhhChHHHHHHHHhc--cccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcC
Q 006776 1 MYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAN 78 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~ 78 (631)
||+||++||+.||.++|+. ++|+++|++ |++.. . +++++||+||++|+++|++++ +++++|+++.++
T Consensus 40 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~-~~~~~-~----~~~~~wf~~~~~n~~~~~~~~-----~~~~~a~~~~~~ 108 (652)
T TIGR01217 40 LHRWSVDELDTFWKAVWEWFDVRFSTPCAR-VVDDR-T----MPGAQWFPGARLNYAENLLRA-----AGTEPALLYVDE 108 (652)
T ss_pred HHHHHHhCHHHHHHHHHHhCCcceeCCCce-eeeCC-C----CCCCEECCCCeeeHHHHHhcc-----CCCCeEEEEECC
Confidence 5899999999999999998 899999999 87321 1 224799999999999999984 357999999866
Q ss_pred CCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCc
Q 006776 79 DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKP 158 (631)
Q Consensus 79 ~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~ 158 (631)
+ +..+++||+||.++|.++|++|+++|+++||+|++++||++++++++|||+++|++++|++++++.+++.++|++++|
T Consensus 109 ~-~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~ 187 (652)
T TIGR01217 109 T-HEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEP 187 (652)
T ss_pred C-CCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCC
Confidence 4 456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccC-CCCCCceec
Q 006776 159 KVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTKCEVEWV 237 (631)
Q Consensus 159 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (631)
+++|+++...++++.+++...+.++...+ +.++.++++........ ... .......|+++.... ....+....
T Consensus 188 k~li~~~~~~~~~k~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (652)
T TIGR01217 188 KLLFTVDGYRYNGKEHDRRDKVAEVRKEL----PTLRAVVHIPYLGPRET-EAP-KIDGALDLEDFTAAAQAAELVFEQL 261 (652)
T ss_pred cEEEEccccccCCcccchHHHHHHHHhcC----CCccEEEEEeCCCCccc-ccc-cccCcccHHHHHhcccCCCCCceec
Confidence 99999998888888888888888777665 67777777654321000 000 011244566665432 122334456
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCC
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGA 317 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~ 317 (631)
+++++++|+|||||||.||||+++|++++.+........++++++|+++++++++|+++. + ++++|+.|++++++++.
T Consensus 262 ~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~-~~~~l~~G~t~vl~~g~ 339 (652)
T TIGR01217 262 PFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMWN-W-LVSGLATGATLVLYDGS 339 (652)
T ss_pred CCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhhH-H-HHHHHhcCcEEEEECCC
Confidence 789999999999999999999999999777666666667899999999999999998753 3 45899999999999987
Q ss_pred CCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccc
Q 006776 318 PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTW 397 (631)
Q Consensus 318 ~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~y 397 (631)
+.++++..++++++++++|++.++|++++.+.+.........++++||.+++|||++++++++++++.++. ++.+.+.|
T Consensus 340 ~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~-~~~~~~~y 418 (652)
T TIGR01217 340 PGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKA-DVWLASIS 418 (652)
T ss_pred CCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCC-CceEEecc
Confidence 77778999999999999999999999998887654332345688999999999999999999999999874 46788999
Q ss_pred ccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCch--hhhhhcccc
Q 006776 398 WQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHE--RYETTYFKP 475 (631)
Q Consensus 398 g~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~--~~~~~~~~~ 475 (631)
|+||++++.....+. .+...+++|.|.+|++++|+|++|+++ .|+.|||++++|+|+++.|||+|++ ++...|+..
T Consensus 419 G~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~ivd~~g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~ 496 (652)
T TIGR01217 419 GGTDICSCFAGANPT-LPVHIGEIQAPGLGTAVQSWDPEGKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDT 496 (652)
T ss_pred CHHHHhccccCCCCC-CCCcCCccCCCcCCCceEEECCCCCCC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcC
Confidence 999986444322221 234568899999999999999999998 4889999999999999999999987 445667777
Q ss_pred CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCC
Q 006776 476 FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY 555 (631)
Q Consensus 476 ~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 555 (631)
++|||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+||+|.|++|++++++..++.+++||+++++...
T Consensus 497 ~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~ 576 (652)
T TIGR01217 497 YPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATL 576 (652)
T ss_pred CCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred cHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHHHHHHhhh
Q 006776 556 SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 629 (631)
Q Consensus 556 ~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (631)
++++.++|+++|+++|+++++|+.|+++++||+|++||++|+.||++++++ +..+.++++||+++++|++..
T Consensus 577 ~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~--~~~~~~~~~~~~~l~~~~~~~ 648 (652)
T TIGR01217 577 DDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGT--PVDNPGAIDNPELLDLYEELA 648 (652)
T ss_pred CHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCC--CCCCcccccCHHHHHHHHHHH
Confidence 777788999999999999999999999999999999999999999998775 467889999999999998753
No 9
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-96 Score=818.83 Aligned_cols=610 Identities=39% Similarity=0.709 Sum_probs=526.9
Q ss_pred ChHhhhhChHHHHHHHHhccccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCC
Q 006776 1 MYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDP 80 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~ 80 (631)
||+||++||+.||.++|+.++|+++|++ |++.+ .+++++||+||++|+++|+|++++. .+|+++|+++.++..
T Consensus 7 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~A~~~~~~~~ 79 (629)
T PRK10524 7 FYQRSIDDPEAFWAEQARRIDWQTPFTQ-VLDYS-----NPPFARWFVGGRTNLCHNAVDRHLA-KRPEQLALIAVSTET 79 (629)
T ss_pred HHHHHhcCHHHHHHHHHHhCCcccCchh-hccCC-----CCCcCccCCCcEeeHHHHHHHHhhc-cCCCCeEEEEEcCCC
Confidence 5899999999999999999999999999 87432 1235799999999999999999987 799999999875433
Q ss_pred CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceE
Q 006776 81 GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKV 160 (631)
Q Consensus 81 ~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ 160 (631)
+..+.+||+||.+++.++|++|+++|+++||+|+++++|++++++++|||+++|++++|++++++.+++.++|++++|++
T Consensus 80 ~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~ 159 (629)
T PRK10524 80 DEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVL 159 (629)
T ss_pred CceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCC-CCCCceecCC
Q 006776 161 VITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDA 239 (631)
Q Consensus 161 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (631)
+|+++...++++.+++.+.+++++..+. +....+++++.... ........+..|.++..... ...+.....+
T Consensus 160 li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (629)
T PRK10524 160 IVSADAGSRGGKVVPYKPLLDEAIALAQ---HKPRHVLLVDRGLA----PMARVAGRDVDYATLRAQHLGARVPVEWLES 232 (629)
T ss_pred EEEccCcccCCcccccHHHHHHHHHhcC---CCCCEEEEEeCCCC----CcCcccCCcccHHHHHhcCCCCCCCceeeCC
Confidence 9999888888888888888777665442 34556666654211 11122223445665544322 2233445678
Q ss_pred CCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCC
Q 006776 240 EDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPT 319 (631)
Q Consensus 240 ~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~ 319 (631)
+++++|+|||||||.||||+++|++++..........++++++|++++.++++|++|+.+.++++|+.|++++++++.+.
T Consensus 233 ~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~ 312 (629)
T PRK10524 233 NEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPT 312 (629)
T ss_pred CCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCC
Confidence 99999999999999999999999998777776666678899999999999999999988889999999999999998877
Q ss_pred CCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccccc
Q 006776 320 YPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQ 399 (631)
Q Consensus 320 ~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~ 399 (631)
.+++..++++|+++++|+++++|++++.|.+.........++++||.+++|||++++++++++.+.++ +++++.||+
T Consensus 313 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~---~~v~~~YG~ 389 (629)
T PRK10524 313 RPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEALG---VPVIDNYWQ 389 (629)
T ss_pred CCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhcC---CCeEecccc
Confidence 78999999999999999999999999999886543344567899999999999999999999999987 789999999
Q ss_pred ccccceecccCCCC--CCCCCCCcCCCcCCCceEEeCC-CCcccCCCcceeEEEecCCC-cccccccCCchhhhhhcccc
Q 006776 400 TETGGFMITPLPGA--WPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWP-GAFRTLYGDHERYETTYFKP 475 (631)
Q Consensus 400 tE~g~~~~~~~~~~--~~~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~p-~~~~gy~~~~~~~~~~~~~~ 475 (631)
||+|+.++...++. ...+++++|.|++|++++|+|+ +|++++.|+.|||++++|+| +++.+||++++++...|+..
T Consensus 390 TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~ 469 (629)
T PRK10524 390 TETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSL 469 (629)
T ss_pred ccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhcc
Confidence 99985444333221 2345789999999999999999 99999999999999999773 78999999999998888754
Q ss_pred C-CCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCC
Q 006776 476 F-PGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP 554 (631)
Q Consensus 476 ~-~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~ 554 (631)
+ +|||+|||+|++|+||+++|+||+||+||++|++|+|.|||++|.+||+|.+++|++++++..|+.+++||+++++..
T Consensus 470 ~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~ 549 (629)
T PRK10524 470 FGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDS 549 (629)
T ss_pred CCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCc
Confidence 4 479999999999999999999999999999999999999999999999999999999999988999999999987543
Q ss_pred C-----cHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHHHHHHhhh
Q 006776 555 Y-----SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 629 (631)
Q Consensus 555 ~-----~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (631)
. .+++.++|+++++++|+++++|..|+++++||+|++||++|+.|+++++++ ...+.++++||+++++|++..
T Consensus 550 ~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 627 (629)
T PRK10524 550 LADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGR--DPGDLTTIEDPAALQQIRQAL 627 (629)
T ss_pred cccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC--CCCCcccccCHHHHHHHHHHh
Confidence 2 245678999999999999999999999999999999999999999998875 467899999999999998754
No 10
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-95 Score=808.76 Aligned_cols=606 Identities=27% Similarity=0.446 Sum_probs=520.0
Q ss_pred ChHhhhhChHHHHHHHHhc--cccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcC
Q 006776 1 MYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAN 78 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~ 78 (631)
+|+||++||+.||.++|+. ++|+++|++ +++.. . .++++||+||++|+++|++++ .+|+++|+++.++
T Consensus 39 ~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~-~~~~~-~----~~~~~wf~~~~~n~~~~~~~~----~~~~~~Al~~~~~ 108 (655)
T PRK03584 39 LWRWSVEDLEAFWQSVWDFFGVIGSTPYTV-VLAGR-R----MPGARWFPGARLNYAENLLRH----RRDDRPAIIFRGE 108 (655)
T ss_pred HHHHHHhCHHHHHHHHHHhcCceecCCCcE-eecCC-C----CCCCeeCCCCEeeHHHHhhcc----CCCCCeEEEEECC
Confidence 5899999999999999997 899999999 86321 1 124799999999999999985 3789999999865
Q ss_pred CCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCc
Q 006776 79 DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKP 158 (631)
Q Consensus 79 ~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~ 158 (631)
+ +..+++||+||.++|.++|++|+++|+++||+|+++++|++++++++|||+++|++++|++++++.+++.++|++++|
T Consensus 109 ~-~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~ 187 (655)
T PRK03584 109 D-GPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEP 187 (655)
T ss_pred C-CceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCC
Confidence 4 456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccC-CCCCCceec
Q 006776 159 KVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTKCEVEWV 237 (631)
Q Consensus 159 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (631)
+++|+++...++.+.+.....+.++...+ +.+++++++...... ...........|++++... .........
T Consensus 188 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (655)
T PRK03584 188 KVLIAVDGYRYGGKAFDRRAKVAELRAAL----PSLEHVVVVPYLGPA---AAAAALPGALLWEDFLAPAEAAELEFEPV 260 (655)
T ss_pred cEEEEccccccCCcccchHHHHHHHHhcC----CCccEEEEEecCCCc---ccccccCCcccHHHHhhccccCCCCceec
Confidence 99999998887778778777777766655 666777766543210 0011122345576665422 222334567
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCC
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGA 317 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~ 317 (631)
..+++++|+|||||||.||||+++|++++.+........+++.++|+++++++++|+++. .++++|+.|++++++++.
T Consensus 261 ~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~ 338 (655)
T PRK03584 261 PFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN--WLVSGLLVGATLVLYDGS 338 (655)
T ss_pred CCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH--HHHHHHHcCCEEEEeCCC
Confidence 789999999999999999999999999777766666667899999999999999998764 357899999999999987
Q ss_pred CCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccc
Q 006776 318 PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTW 397 (631)
Q Consensus 318 ~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~y 397 (631)
+..+++..++++++++++|++.++|++++.+++.........++++||.+++|||++++++++++.+.++. ++++.+.|
T Consensus 339 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~-~~~~~~~y 417 (655)
T PRK03584 339 PFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKA-DVWLASIS 417 (655)
T ss_pred CCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCC-CceEEecc
Confidence 77789999999999999999999999999998764333345678999999999999999999999999864 47899999
Q ss_pred ccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCch--hhhhhcccc
Q 006776 398 WQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHE--RYETTYFKP 475 (631)
Q Consensus 398 g~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~--~~~~~~~~~ 475 (631)
|+||+++.+....+ ..+..++++|.|++|++++|+|++|+++ .|+.|||+|++|+|+++.|||++++ ++...|+..
T Consensus 418 G~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~ 495 (655)
T PRK03584 418 GGTDICSCFVGGNP-LLPVYRGEIQCRGLGMAVEAWDEDGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDT 495 (655)
T ss_pred ChHhhhcccccCCC-CCCcCCCccCCCcCCceeEEECCCCCCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhcc
Confidence 99998765443222 1245678999999999999999999999 7889999999988899999999986 455667777
Q ss_pred CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCC
Q 006776 476 FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY 555 (631)
Q Consensus 476 ~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 555 (631)
++|||+|||+|++|+||+++|+||+||+||++|++|+|.|||++|.+||+|.+|+|++++++..++.+++||+++++...
T Consensus 496 ~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~ 575 (655)
T PRK03584 496 FPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTL 575 (655)
T ss_pred CCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999998889999999999987766
Q ss_pred cHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCc-CCCCCCCCCCChHHHHHHHhhh
Q 006776 556 SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL-DELGDTSTLADPGVVDQLIALA 629 (631)
Q Consensus 556 ~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 629 (631)
++++.++|+++|+++|+++++|..|+++++||+|+||||+|+.||+++.+.. ..+.+.++++||+++++|++..
T Consensus 576 ~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (655)
T PRK03584 576 DDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALANPEALDWFADLA 650 (655)
T ss_pred cHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 6777889999999999999999999999999999999999999999998753 2234899999999999998753
No 11
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=3.2e-90 Score=770.46 Aligned_cols=577 Identities=26% Similarity=0.407 Sum_probs=478.4
Q ss_pred ChHhhhhChHHHHHHHHhc--cccccccccccccccccccCCCccccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcC
Q 006776 1 MYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAN 78 (631)
Q Consensus 1 ~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~ 78 (631)
||+||++||+.||.++|+. +.|+++|++ +++.+.. ..+.++||+|+++|+++|+|++++. .+|+++|+++.++
T Consensus 125 ~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~-v~~~~~~---~~~~~~wf~g~~ln~~~~~l~~~~~-~~pd~~Ai~~~~e 199 (728)
T PLN03052 125 FQRFSVENPEVYWSIVLDELSLVFSVPPRC-ILDTSDE---SNPGGQWLPGAVLNVAECCLTPKPS-KTDDSIAIIWRDE 199 (728)
T ss_pred HHHHHhhCHHHHHHHHHHhcCCCccCCCce-eecCCCC---CCCCCEECCCCEeEHHHHHHHHHhc-cCCCCeEEEEECC
Confidence 5899999999999999997 689999999 8743111 1124699999999999999999876 6899999999865
Q ss_pred CC--CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhc
Q 006776 79 DP--GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDC 156 (631)
Q Consensus 79 ~~--~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~ 156 (631)
.. +..+++||+||+++|.++|++|+++|+++||+|++++||++++++++|||+++|++++|++|+++.+++.++++++
T Consensus 200 ~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~ 279 (728)
T PLN03052 200 GSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKIS 279 (728)
T ss_pred CCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhc
Confidence 31 2357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCC-----CC
Q 006776 157 KPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP-----TK 231 (631)
Q Consensus 157 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 231 (631)
+|+++|+++...++++.+++...+.++. . ..++++....... .... ...+..|++++.... ..
T Consensus 280 ~~k~lit~d~~~~~gk~~~~~~~~~~~~-------~--~~~iv~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~ 347 (728)
T PLN03052 280 KAKAIFTQDVIVRGGKSIPLYSRVVEAK-------A--PKAIVLPADGKSV--RVKL-REGDMSWDDFLARANGLRRPDE 347 (728)
T ss_pred CceEEEEcCccccCCcccchHHHHHHhc-------C--CcEEEEeCCCCcc--cccc-ccCCccHHHHHhcccccccccc
Confidence 9999999998888788777665554332 1 2344444322100 0000 113456777654321 11
Q ss_pred CCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceE
Q 006776 232 CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASV 311 (631)
Q Consensus 232 ~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~ 311 (631)
++....+++++++|+|||||||.||||+|+|++++.... .....++++++|+++++++++|++|. +.++++|+.|+++
T Consensus 348 ~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~-~~~~~~~l~~~d~~~~~~~l~w~~g~-~~v~~~L~~Gat~ 425 (728)
T PLN03052 348 YKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAA-DAWAHLDIRKGDIVCWPTNLGWMMGP-WLVYASLLNGATL 425 (728)
T ss_pred ccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHH-HHHHhcCCCCCcEEEECCCcHHHhHH-HHHHHHHHhCCEE
Confidence 222234679999999999999999999999998654433 33445789999999999999999997 5678999999999
Q ss_pred EEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCc
Q 006776 312 VVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRC 391 (631)
Q Consensus 312 vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~ 391 (631)
+++++.+ ++..++++++++++|+++++|++++.|.+... ...+++++||.++++||+++++.+.|+.+.++. .
T Consensus 426 vl~~g~p---~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~--~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~--~ 498 (728)
T PLN03052 426 ALYNGSP---LGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNC--MAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGY--K 498 (728)
T ss_pred EEeCCCC---CCChHHHHHHHHCCCEEEECHHHHHHHHhcCC--cccCChhheeEEEecCCCCCHHHHHHHHHhcCC--C
Confidence 9998864 45679999999999999999999999988653 246688999999999999999999999988763 5
Q ss_pred ceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCc--ceeEEEecCCCcccccccCCchhhh
Q 006776 392 PISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGEC--SGYLCIKSSWPGAFRTLYGDHERYE 469 (631)
Q Consensus 392 ~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~--~Gel~v~~~~p~~~~gy~~~~~~~~ 469 (631)
++.+.||+||++++++...+. .+..++++|.|++|++++|+|++|++++.|+ .|||+++++++++..+|+++. +.
T Consensus 499 ~i~~~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~--~~ 575 (728)
T PLN03052 499 PIIEYCGGTELGGGFVTGSLL-QPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALFPLMFGASSTLLNAD--HY 575 (728)
T ss_pred CeEeeccChhhCcccccCCCC-CCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEeCCCCCCCccccCch--hh
Confidence 799999999998765443322 2356789999999999999999999999884 699999987777778888874 34
Q ss_pred hhccccCC---C--eEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHh-cCcccceEEEEeeecCCCC-ee
Q 006776 470 TTYFKPFP---G--YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGVEHEVKG-QG 542 (631)
Q Consensus 470 ~~~~~~~~---g--~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~-~~~~V~~~~vv~~~~~~~~-~~ 542 (631)
..|+..++ | ||+|||++++|+||+++|+||+||+||++|+||+|.|||++|. .||+|.|++|++++++..| +.
T Consensus 576 ~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~ 655 (728)
T PLN03052 576 KVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQ 655 (728)
T ss_pred hhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEE
Confidence 55665432 4 9999999999999999999999999999999999999999995 8999999999999998665 89
Q ss_pred EEEEEEeC--CCCCCc-HHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 543 IYAFVTLV--EGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 543 ~~~~v~~~--~~~~~~-~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
+++||+++ ++.+.+ +++.+.|++.|+++|+++++|..|+++++||+|+|||++|+.||+++.+.
T Consensus 656 ~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~~ 722 (728)
T PLN03052 656 LVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQE 722 (728)
T ss_pred EEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHhh
Confidence 99999998 555444 67888999999999999999999999999999999999999999998764
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-81 Score=657.73 Aligned_cols=500 Identities=29% Similarity=0.464 Sum_probs=422.3
Q ss_pred CCCe-eEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCC--CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC
Q 006776 67 LGDK-VAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIG--VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG 143 (631)
Q Consensus 67 ~~~~-~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~G--v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~ 143 (631)
+.++ +++++.... ++.+||.|+++++.++|.+|.++| +++||+|++++||++++++++|||+++|+++.++||.
T Consensus 29 ~~~~~~~~i~~~~~---g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~ 105 (537)
T KOG1176|consen 29 YLDRNTSLVYQDSD---GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPR 105 (537)
T ss_pred cccCcceEEEecCC---CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcc
Confidence 3444 788876432 589999999999999999999775 8999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC-CCCccc-h
Q 006776 144 FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ-DGRDIW-W 221 (631)
Q Consensus 144 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~-~ 221 (631)
+.+.++.+.++.++|+++|++.... +.+.++...+ . ..++++..... ..... ...+.. +
T Consensus 106 ~~~~ei~~~~~~s~~kiif~d~~~~---------~~i~~~~~~~----~--~~i~~l~~~~~----~~~~~~~~~~~~~~ 166 (537)
T KOG1176|consen 106 LTASEIAKQLKDSKPKLIFVDEDFY---------DKISEATSKL----A--LKIIVLTGDEG----VISISDLVEDLDAF 166 (537)
T ss_pred cCHHHHHHHHHhcCCeEEEEcCchH---------HHHHHHHhhc----C--CceEEEecccC----ccccccccccccch
Confidence 9999999999999999999987654 3444443332 1 33444433210 00000 001111 3
Q ss_pred hhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHH
Q 006776 222 QDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVT 301 (631)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~ 301 (631)
.+++....... ..+...+|++.|+|||||||.||||++||++++.+..... ....+...++.++.+|++|++|+...+
T Consensus 167 ~~~~~~~~~~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~-~~~~~~~~~v~l~~lPl~H~~Gl~~~~ 244 (537)
T KOG1176|consen 167 EDLMPEGLPDG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIK-IGWELTSDDVYLCTLPLFHIYGLITLL 244 (537)
T ss_pred hhccccCCCcc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhh-hcccCCCCceEEEechHHHHhHHHHHH
Confidence 33333322222 4456679999999999999999999999999666644332 234566689999999999999987665
Q ss_pred HHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHH
Q 006776 302 YGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRW 381 (631)
Q Consensus 302 ~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~ 381 (631)
.+.+..|++++.... ++++.+++.|++|++|+++++|.++..|.+.+. ..+++++++|.+.+||+++++++.++
T Consensus 245 ~~~~~~~~~ii~~~~----f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~--~~~~~l~sl~~v~~gga~~~~~~~~~ 318 (537)
T KOG1176|consen 245 LSLLAGGTTIICLRK----FDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPI--VKKYDLSSLRSVLSGGAPLSPATLEK 318 (537)
T ss_pred HHHHhCCceEEECCC----CCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCc--cCcccCCccEEEEecCCCCCHHHHHH
Confidence 555655666665433 599999999999999999999999999999862 45679999999999999999999999
Q ss_pred HHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccc
Q 006776 382 FFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTL 461 (631)
Q Consensus 382 ~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy 461 (631)
+.+.++ ...+.+.||+||+|+.++.+..... .+++++|.++++++..|.+++|+.++.++.||||++| +.+|.||
T Consensus 319 ~~~~l~--~~~v~q~YGmTE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg--~~imkGY 393 (537)
T KOG1176|consen 319 VKERLP--NVTVIQGYGMTEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRG--PQVMKGY 393 (537)
T ss_pred HHHhCC--CceEEEeeccccccCceeecCCCcc-CcccccCccccceEEEeeCCCCCCCCCCCceEEEEEC--cccchhh
Confidence 999999 4789999999999987776655433 5899999999999999999999999999999999999 9999999
Q ss_pred cCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCe
Q 006776 462 YGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQ 541 (631)
Q Consensus 462 ~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~ 541 (631)
|+|++++...+.. +|||+|||+|++|+||+++|.+|++|+||.+|++|+|.|||++|.+||.|.||+|||+||+..||
T Consensus 394 ~~NpeaT~~~~~~--~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge 471 (537)
T KOG1176|consen 394 LKNPEATKEAFDD--DGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGE 471 (537)
T ss_pred cCChHHHHhhccc--CCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCC
Confidence 9999999888765 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 542 GIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 542 ~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
.++||||.+++...+ +++|.++|++++++|+.|+.++|+++||||++|||+|+.||+.+.+.
T Consensus 472 ~p~A~VV~k~g~~lt---e~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 472 TPAAFVVLKKGSTLT---EKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred cceEEEEecCCCcCC---HHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhc
Confidence 999999999987776 78999999999999999999999999999999999999999999764
No 13
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-79 Score=593.56 Aligned_cols=523 Identities=23% Similarity=0.298 Sum_probs=446.7
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++-++|....+ ..||+.|+++..+ ..++||+|+.+.+..+|.+|.++|+++||||++..||+.+|+..+|||+++
T Consensus 51 Tigq~l~~~t~-~v~dkea~Vf~~e----g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 51 TIGQLLETTTE-RVPDKEAAVFDHE----GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred cHHHHHHHHhh-ccCcceEEEEeec----cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 45566766666 6899999998754 466999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhh---------cCCCccEEEEEecCC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK---------SGISVDVCLTYENQS 204 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~vi~~~~~~ 204 (631)
|.+.+++||.|..++++..|++.+++++|+...+. .-++-+.+.++..+... ..|.+.+++..++..
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k----~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~ 201 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFK----TQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH 201 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchhh----hchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC
Confidence 99999999999999999999999999999876542 22333444444333321 225667777665322
Q ss_pred ccccccCcCCCCCccchhhhcccCCCC------CCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC
Q 006776 205 AMTRENTKWQDGRDIWWQDVVPKYPTK------CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 278 (631)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~ 278 (631)
. ..+.+.++|.+...... .......+++++.|.|||||||.|||+.+||.+++.+... ....++
T Consensus 202 ~---------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~-vg~r~g 271 (596)
T KOG1177|consen 202 P---------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARA-VGARAG 271 (596)
T ss_pred c---------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHH-HHHHhC
Confidence 1 23455566666543321 1112356899999999999999999999999996655544 445788
Q ss_pred CCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccc
Q 006776 279 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 358 (631)
Q Consensus 279 ~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~ 358 (631)
+...+++++..|++|.+|.....+++|..|+++|++..+ +++...++.|.++++|.++++|+++..|++... ..+
T Consensus 272 ~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~---f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~--~~~ 346 (596)
T KOG1177|consen 272 YNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPS---FDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQ--KQQ 346 (596)
T ss_pred cCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCC---CChHHHHHHHHhhceEEEecChHHHHHHhcchh--hcc
Confidence 988889999999999999888999999999999998765 689999999999999999999999999998754 457
Q ss_pred cCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC-CCCCCCCcCCCcCCCceEEeCCCC
Q 006776 359 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPFFGVQPVIVDEKG 437 (631)
Q Consensus 359 ~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~g 437 (631)
.+++++|.++.||+++++++.+.+.+.... ..+...||+||++.+.+...+++ ...+..++|..+++.+..|+|.+|
T Consensus 347 ~~~s~lr~~vigGa~~s~eLlk~iv~~~~m--~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g 424 (596)
T KOG1177|consen 347 VDLSSLRKGVIGGAPVSPELLKLIVNQMNM--KDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDG 424 (596)
T ss_pred CchhhhhhheeCCCCCCHHHHHHHHHhhCc--eeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCC
Confidence 789999999999999999999999987653 35888999999998877776655 234567999999999999999999
Q ss_pred cccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHH
Q 006776 438 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVE 517 (631)
Q Consensus 438 ~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE 517 (631)
..++-|..|||+++| +..|.|||++++.+..+..+ +.||+|||.|.+|++|+++|+||++|+|+.+|++|+|.|||
T Consensus 425 ~~v~~~~~Gel~iRG--Y~tMl~Ywg~~~kT~eti~~--drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE 500 (596)
T KOG1177|consen 425 SEVPLGTKGELLIRG--YSTMLGYWGEEEKTKETIGN--DRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELE 500 (596)
T ss_pred CccccCCCceEEEEe--chhheeecCCcccchhhccc--ccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHH
Confidence 999999999999999 99999999999888777655 78999999999999999999999999999999999999999
Q ss_pred HHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHH
Q 006776 518 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 597 (631)
Q Consensus 518 ~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~ 597 (631)
+.|.+||.|.++.|||++|+..||.++|.|.+..+.... -..++|+.+|+.++.-+++|+.++++++||+|.+|||+|-
T Consensus 501 ~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~-~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKF 579 (596)
T KOG1177|consen 501 DFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGK-TTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKF 579 (596)
T ss_pred HHHhhCCCeeeEEEEccCCCcccceEEEEEEeecccccc-ccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhH
Confidence 999999999999999999999999999999998876531 2378999999999999999999999999999999999999
Q ss_pred HHHHHHhcCc
Q 006776 598 ILRKIASRQL 607 (631)
Q Consensus 598 ~l~~~~~~~~ 607 (631)
.+|++..+++
T Consensus 580 eir~~~k~~l 589 (596)
T KOG1177|consen 580 EIREMSKGHL 589 (596)
T ss_pred HHHHHHHhhc
Confidence 9999998653
No 14
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-77 Score=657.12 Aligned_cols=537 Identities=42% Similarity=0.726 Sum_probs=454.3
Q ss_pred ccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHH
Q 006776 44 IEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMEL 123 (631)
Q Consensus 44 ~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~ 123 (631)
-+||+++++|+++++++++++..+|+++|+++.++. ..+.+||+||.+++.++|.+|.++|+++||+|+++++|++++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~ 111 (570)
T PRK04319 34 FSWLETGKVNIAYEAIDRHADGGRKDKVALRYLDAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPEL 111 (570)
T ss_pred hccCCCCceeHHHHHHHHhhccCCCCceEEEEECCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH
Confidence 379999999999999999986347999999987532 357899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecC
Q 006776 124 PIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQ 203 (631)
Q Consensus 124 ~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~ 203 (631)
++++|||+++|++++|+++.++.+++.+++++++++++++++........ ..+ +.++.+++++..
T Consensus 112 ~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-----------~~~----~~~~~~~~~~~~ 176 (570)
T PRK04319 112 YFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA-----------DDL----PSLKHVLLVGED 176 (570)
T ss_pred HHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch-----------hcC----CCceEEEEECCC
Confidence 99999999999999999999999999999999999999998654321100 011 455566555432
Q ss_pred CccccccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCc
Q 006776 204 SAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSD 283 (631)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d 283 (631)
.. .......|.+.+...+...+.....++++++|+|||||||.||||+++|++++.+.. .....+++.++|
T Consensus 177 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~-~~~~~~~~~~~d 247 (570)
T PRK04319 177 VE--------EGPGTLDFNALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQ-TGKYVLDLHEDD 247 (570)
T ss_pred cC--------CCcCccCHHHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHH-HHHHhcCCCCCc
Confidence 10 111233455554433333333445678999999999999999999999999654443 344567889999
Q ss_pred EEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCc
Q 006776 284 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKS 363 (631)
Q Consensus 284 ~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~ 363 (631)
++++..+++|++|+.+.++.+++.|+++++..+. +++..+++.|+++++|+++++|++++.|.+.........++++
T Consensus 248 ~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 324 (570)
T PRK04319 248 VYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGR---FSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSS 324 (570)
T ss_pred eEEecCChHHhhCchHHHHHHHhcCceEEEECCC---CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCccc
Confidence 9999999999999888889999999999997643 5899999999999999999999999999876543334557899
Q ss_pred eeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCC
Q 006776 364 LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE 443 (631)
Q Consensus 364 lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g 443 (631)
||.+++||+++++++.+++.+.++ .++++.||+||+++.++...+. ....++++|.|+||++++|+|++|.+++.|
T Consensus 325 lr~~~~gG~~l~~~~~~~~~~~~g---~~i~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g 400 (570)
T PRK04319 325 LRHILSVGEPLNPEVVRWGMKVFG---LPIHDNWWMTETGGIMIANYPA-MDIKPGSMGKPLPGIEAAIVDDQGNELPPN 400 (570)
T ss_pred ceEEEEcccCCCHHHHHHHHHHhC---CCeEeceeecccCCEEEecCCC-CCCCCCcCcCCCCCCEEEEECCCCCCCCCC
Confidence 999999999999999999999887 6899999999999766544332 235678999999999999999999999999
Q ss_pred cceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcC
Q 006776 444 CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSH 523 (631)
Q Consensus 444 ~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~ 523 (631)
+.|||++++++|+++.|||++++.+...+. +|||+|||+++++++|+++++||.||+||++|++|+|.|||++|.+|
T Consensus 401 ~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~---~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 401 RMGNLAIKKGWPSMMRGIWNNPEKYESYFA---GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred CceEEEEcCCCChHHhHhcCCHHHhhhhhc---CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhC
Confidence 999999998778999999999988776653 78999999999999999999999999999999999999999999999
Q ss_pred cccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHH
Q 006776 524 PQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 603 (631)
Q Consensus 524 ~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~ 603 (631)
|.|.+++|++++++..++.++++|++.++...++++.++|+++|+++|+.|++|..|+++++||+|++||++|+.|+++.
T Consensus 478 ~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~ 557 (570)
T PRK04319 478 PAVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWE 557 (570)
T ss_pred CCeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHH
Confidence 99999999999998889999999999887665666778999999999999999999999999999999999999999997
Q ss_pred hcCcCCCCCCCCCCC
Q 006776 604 SRQLDELGDTSTLAD 618 (631)
Q Consensus 604 ~~~~~~~~~~~~~~~ 618 (631)
.+. ...+.++++|
T Consensus 558 ~~~--~~~~~~~~~~ 570 (570)
T PRK04319 558 LGL--PEGDLSTMED 570 (570)
T ss_pred hCC--CcCccccccC
Confidence 653 2334455554
No 15
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-74 Score=624.19 Aligned_cols=511 Identities=31% Similarity=0.415 Sum_probs=420.6
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+...+.+++. .+|+++|+++.+.. .++||+||.+++.++|++|++.|+++||+|+|+++|++++++++|||+++
T Consensus 12 ~~~~~l~~~a~-~~~~~~a~~~~~~~----~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 12 TLASLLERAAR-RNPDRPALIFLGRG----GRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred cHHHHHHHHHH-hCCCceEEEEcCCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 45577778877 79999999987532 26999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|.+..+++.++++.++++++++++... .......... +....+........
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-------- 145 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFA---------ALLEAVAEAL----PVVLVVLLVGDADD-------- 145 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccch---------hHHHHHhccC----CcceEEEecccccc--------
Confidence 99999999999999999999999999999987621 2222221111 11122221111000
Q ss_pred CCCCccchhhhcccCCCC-CCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC--CCCCcEEEEecc
Q 006776 214 QDGRDIWWQDVVPKYPTK-CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD--YKPSDVYWCTAD 290 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~--~~~~d~~~~~~~ 290 (631)
.. ...+.+.....+.. ......+++++++|+|||||||.||||++||++++.+.... ...++ +++.|++++.+|
T Consensus 146 ~~--~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~-~~~~~~~~~~~d~~l~~lP 222 (534)
T COG0318 146 RL--PITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGI-AAALGGGLTPDDVVLSWLP 222 (534)
T ss_pred cc--cccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHH-HHHhcccCCCCceEEEecC
Confidence 00 01233332222111 11112678999999999999999999999999976664443 34556 899999999999
Q ss_pred cceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCC-ceeEEEE
Q 006776 291 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK-SLRVLGS 369 (631)
Q Consensus 291 ~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~-~lr~v~~ 369 (631)
++|.+|....+..+++.|+++++..+. .++++.++..+.++++|+++++|+++..|+...... ..+++ +||.+++
T Consensus 223 l~H~~Gl~~~~~~~~~~G~~~v~~~~~--~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~--~~~~~~~lr~~~~ 298 (534)
T COG0318 223 LFHIFGLIVGLLAPLLGGGTLVLLSPE--PFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKD--DDDLSSSLRLVLS 298 (534)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEeCCCC--CcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccC--ccccccceEEEEe
Confidence 999999987888889999999998642 258899999999999999999999999998886532 22344 4999999
Q ss_pred ccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCc-ccCCCcceeE
Q 006776 370 VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGV-EIEGECSGYL 448 (631)
Q Consensus 370 ~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~-~~~~g~~Gel 448 (631)
||+++++++++++.+.++. ..+++.||+||++++++.+.......+.+++|.|+||++++|+|+++. +++ |+.|||
T Consensus 299 gg~~~~~~~~~~~~~~~~~--~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei 375 (534)
T COG0318 299 GGAPLPPELLERFEERFGP--IAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEI 375 (534)
T ss_pred cCCcCCHHHHHHHHHHhCC--CceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEE
Confidence 9999999999999999983 479999999999987665544320136778899999999999998765 555 889999
Q ss_pred EEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccce
Q 006776 449 CIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAE 528 (631)
Q Consensus 449 ~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~ 528 (631)
+++| |+++.|||++++.+...|.. +|||+|||+|++|+||+++|.||.+|+|+.+|++|+|.|||.++.+||.|.+
T Consensus 376 ~irg--p~v~~GY~~~pe~t~~~f~~--~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~ 451 (534)
T COG0318 376 WVRG--PNVMKGYWNRPEATAEAFDE--DGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAE 451 (534)
T ss_pred EEEC--chhhhhhcCChHHHHHhhcc--CCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcce
Confidence 9999 99999999999988885543 5999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 529 AAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 529 ~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
++|+|++++..||.++|+|+++++.. .....++|.++|+++++.+++|+.++++++||+|++||++|+.||+.+..
T Consensus 452 aavvgvpd~~~Ge~~~a~v~~~~~~~-~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 452 AAVVGVPDERWGERVVAVVVLKPGGD-AELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred EEEEeCCCCccCceEEEEEEEcCCCC-CCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 99999999999999999999998732 11127889999999999999999999999999999999999999999876
No 16
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.3e-71 Score=617.61 Aligned_cols=526 Identities=25% Similarity=0.335 Sum_probs=425.1
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCC--CCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHH
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEAND--PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 131 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~--~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~ 131 (631)
+++++|+++++ .+|+++|+++.... .+..+++||+||.+++.++|++|+++|+++||+|++++||++++++++|||+
T Consensus 26 t~~~~l~~~a~-~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~ 104 (632)
T PRK07529 26 STYELLSRAAA-RHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGE 104 (632)
T ss_pred CHHHHHHHHHH-HCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 46788999988 79999999975321 1245789999999999999999999999999999999999999999999999
Q ss_pred HhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccc--
Q 006776 132 RIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE-- 209 (631)
Q Consensus 132 ~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-- 209 (631)
++| +++|+++.++.+++.++++.++++++|+++.... .+..+.+..+.... +.++.++.++........
T Consensus 105 ~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~ 175 (632)
T PRK07529 105 AAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPG----TDIWQKVAEVLAAL----PELRTVVEVDLARYLPGPKR 175 (632)
T ss_pred HhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCC----chHHHHHHHHHhcC----CcceeEEEecCccccccccc
Confidence 999 5699999999999999999999999999875421 12223333333333 566777665432210000
Q ss_pred -cCcC----CCCCccchhhhcccCCCC--CCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCC
Q 006776 210 -NTKW----QDGRDIWWQDVVPKYPTK--CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPS 282 (631)
Q Consensus 210 -~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~ 282 (631)
.... .......|.+.+...+.. .......++++++|+|||||||.||+|+++|++++.+. ......+++.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~-~~~~~~~~~~~~ 254 (632)
T PRK07529 176 LAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANA-WLGALLLGLGPG 254 (632)
T ss_pred ccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHH-HHHHHhcCCCCC
Confidence 0000 111233455544433221 11223467999999999999999999999999965443 344456778899
Q ss_pred cEEEEecccceecchhHHHHHhhhcCceEEEecCCCCC--CChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccC
Q 006776 283 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTY--PDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYS 360 (631)
Q Consensus 283 d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~--~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~ 360 (631)
+++++.+|++|+++....++.++..|+++++....... .....++++++++++|++.++|+++..|++... ...+
T Consensus 255 d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---~~~~ 331 (632)
T PRK07529 255 DTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV---DGHD 331 (632)
T ss_pred CEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc---cCCC
Confidence 99999999999999877889999999999997532111 113678999999999999999999999988643 2346
Q ss_pred CCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEe--CCCC-
Q 006776 361 RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV--DEKG- 437 (631)
Q Consensus 361 l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~--d~~g- 437 (631)
+++||.+++||+++++++.+++++.++ +++++.||+||+++.+..+... ....++++|.|+|++.++|+ |++|
T Consensus 332 ~~slr~v~~gg~~l~~~l~~~~~~~~g---~~l~~~YG~TE~~~~~~~~~~~-~~~~~~svG~~~p~~~v~i~~~d~~g~ 407 (632)
T PRK07529 332 ISSLRYALCGAAPLPVEVFRRFEAATG---VRIVEGYGLTEATCVSSVNPPD-GERRIGSVGLRLPYQRVRVVILDDAGR 407 (632)
T ss_pred ccceEEEEEcCCCCCHHHHHHHHHHhC---CcEeeeecccccCcccccCCcc-ccccCCCcccccCCceEEEEEcCCCCc
Confidence 899999999999999999999999987 7899999999998765544322 23467899999999998884 6777
Q ss_pred --cccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHH
Q 006776 438 --VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAE 515 (631)
Q Consensus 438 --~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~e 515 (631)
++++.|+.|||+|+| |+++.||++++. ....++ .+|||+|||+|++|+||++++.||+||+||++|++|+|.+
T Consensus 408 ~~~~~~~g~~Gel~v~g--p~v~~GY~~~~~-~~~~~~--~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~e 482 (632)
T PRK07529 408 YLRDCAVDEVGVLCIAG--PNVFSGYLEAAH-NKGLWL--EDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAA 482 (632)
T ss_pred ccccCCCCCceEEEEEC--CCccccccCCcc-cccccc--CCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHH
Confidence 789999999999999 999999998654 334443 3789999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcC-CCccCceEEECCCCCCCCCchh
Q 006776 516 VESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIG-AFAAPDKIHWAPGLPKTRSGKI 594 (631)
Q Consensus 516 IE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~-~~~~p~~i~~v~~lP~t~sGKi 594 (631)
||++|.+||+|.+|+|++.+++..|+.++++|++.++...+ .++++++++++++ .+++|+.|+++++||+|.+||+
T Consensus 483 IE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~---~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GKi 559 (632)
T PRK07529 483 IEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASAT---EAELLAFARDHIAERAAVPKHVRILDALPKTAVGKI 559 (632)
T ss_pred HHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCC---HHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCcc
Confidence 99999999999999999999998899999999998876655 5678999999986 4789999999999999999999
Q ss_pred hHHHHHHHHhc
Q 006776 595 MRRILRKIASR 605 (631)
Q Consensus 595 ~r~~l~~~~~~ 605 (631)
+|+.||+.+..
T Consensus 560 ~r~~Lr~~~~~ 570 (632)
T PRK07529 560 FKPALRRDAIR 570 (632)
T ss_pred cHHHHHHHHHH
Confidence 99999998754
No 17
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.6e-72 Score=611.67 Aligned_cols=500 Identities=24% Similarity=0.319 Sum_probs=414.8
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
+.+.++++++++ .+|+++|+++. .+++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||++
T Consensus 49 ~~~~~~~~~~a~-~~pd~~Al~~~------~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~ 121 (549)
T PRK07788 49 GPFAGLVAHAAR-RAPDRAALIDE------RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGK 121 (549)
T ss_pred chHHHHHHHHHH-HCCCceEEEEC------CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 467888988888 79999999853 46899999999999999999999999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCc
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 212 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 212 (631)
+|++++|+++.++.+++.+++++++++++|+++... ..+....... +.+..++...... .
T Consensus 122 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~-------~ 181 (549)
T PRK07788 122 VGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFT---------DLLSALPPDL----GRLRAWGGNPDDD-------E 181 (549)
T ss_pred cCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhH---------HHHHhhcccc----ccceEEEEecCcc-------c
Confidence 999999999999999999999999999999986532 2222211111 2233322211110 0
Q ss_pred CCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccc
Q 006776 213 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 292 (631)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 292 (631)
........++++....... ..+...+++++|+|||||||.||+|+++|.+++..... ....+++.++++++..+|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~-~~~~~~~~~~d~~~~~~p~~ 258 (549)
T PRK07788 182 PSGSTDETLDDLIAGSSTA--PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAG-LLSRVPFRAGETTLLPAPMF 258 (549)
T ss_pred cCCcCcccHHHHhcCCCCC--CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHH-HHhhCCCCcCCeEEEccchH
Confidence 0011223455554432221 11234678899999999999999999999996554443 34467788999999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|..|+ ..++.++..|+++++... +++..+++.++++++|++.++|++++.+++.........++++||.+++||+
T Consensus 259 ~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~ 333 (549)
T PRK07788 259 HATGW-AHLTLAMALGSTVVLRRR----FDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGS 333 (549)
T ss_pred HHHHH-HHHHHHHHhCCEEEECCC----CCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCC
Confidence 99986 456778999999998743 4899999999999999999999999999987543234456889999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEec
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 452 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~ 452 (631)
++++++++++.+.++ .++++.||+||++...+.. .......++++|.|+++++++|+|++|++++.|+.|||+++|
T Consensus 334 ~l~~~~~~~~~~~~~---~~l~~~YG~TE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g 409 (549)
T PRK07788 334 ALSPELATRALEAFG---PVLYNLYGSTEVAFATIAT-PEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVVGRIFVGN 409 (549)
T ss_pred CCCHHHHHHHHHHhC---ccceeccCcchhchhhccC-hhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCeEEEEEeC
Confidence 999999999999987 6799999999998654432 222234668899999999999999999999999999999999
Q ss_pred CCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEE
Q 006776 453 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 532 (631)
Q Consensus 453 ~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv 532 (631)
|.++.||++++.. ...+|||+|||+|++|+||++++.||+||+||++|++|+|.+||++|.+||+|.+++|+
T Consensus 410 --~~~~~gY~~~~~~------~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~ 481 (549)
T PRK07788 410 --GFPFEGYTDGRDK------QIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVI 481 (549)
T ss_pred --CCccccccCCCcc------cccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 8999999998764 12379999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHH
Q 006776 533 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKI 602 (631)
Q Consensus 533 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~ 602 (631)
+++++..++.++++|+++++...+ .++|+++++++|+++++|..|+++++||+|++||++|+.|+++
T Consensus 482 ~~~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 482 GVDDEEFGQRLRAFVVKAPGAALD---EDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred CCcCcccccEEEEEEEeCCCCCCC---HHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 999988899999999998765554 5789999999999999999999999999999999999999863
No 18
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2e-70 Score=600.68 Aligned_cols=517 Identities=25% Similarity=0.353 Sum_probs=426.5
Q ss_pred cccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHH
Q 006776 45 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 124 (631)
Q Consensus 45 ~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~ 124 (631)
.|+.. ++.+.|++++. .+|+++|+++.+...+..+.+||.||+++++++|++|.+.|+++||+|+++++|+++++
T Consensus 20 ~~~~~----~l~~~l~~~a~-~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~ 94 (547)
T PRK13295 20 HWHDR----TINDDLDACVA-SCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFT 94 (547)
T ss_pred CCcCC----CHHHHHHHHHH-HCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHH
Confidence 67753 35677888877 79999999975432233479999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCC
Q 006776 125 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 204 (631)
Q Consensus 125 v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 204 (631)
+++|||+++|++++|++|.++.+++.+++++++++++++++.... .+....+......+ +.++.++++....
T Consensus 95 ~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 166 (547)
T PRK13295 95 VLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRG----FDHAAMARRLRPEL----PALRHVVVVGGDG 166 (547)
T ss_pred HHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccC----cchHHHHHHHhhhC----CCcceEEEecCCC
Confidence 999999999999999999999999999999999999999875421 11122222222222 4556666543221
Q ss_pred ccccccCcCCCCCccchhhhccc--------CCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHh
Q 006776 205 AMTRENTKWQDGRDIWWQDVVPK--------YPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 276 (631)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~ 276 (631)
. ..|.++... .+..........+++++|+|||||||.||+|+++|++++.+... ....
T Consensus 167 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~-~~~~ 232 (547)
T PRK13295 167 A-------------DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVP-YAER 232 (547)
T ss_pred c-------------cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHH-HHHH
Confidence 0 112222110 00111112245789999999999999999999999996555444 4456
Q ss_pred cCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccc
Q 006776 277 FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV 356 (631)
Q Consensus 277 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~ 356 (631)
+++.+++++++.+|++|..|+...++.++..|+++++.+. .++..+++.++++++|++.++|+++..|......
T Consensus 233 ~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~-- 306 (547)
T PRK13295 233 LGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDI----WDPARAAELIRTEGVTFTMASTPFLTDLTRAVKE-- 306 (547)
T ss_pred hCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCC----CCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccc--
Confidence 7889999999999999999887888999999999998754 4889999999999999999999999999876432
Q ss_pred cccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCC
Q 006776 357 TRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEK 436 (631)
Q Consensus 357 ~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~ 436 (631)
...++++||.+++||+++++++.+++.+.++ +++++.||+||++.+.+...........+++|+|+++++++|+|++
T Consensus 307 ~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~ 383 (547)
T PRK13295 307 SGRPVSSLRTFLCAGAPIPGALVERARAALG---AKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDAD 383 (547)
T ss_pred cCCCcccceEEEEecCCCCHHHHHHHHHHhC---CCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCC
Confidence 3456789999999999999999999999986 7899999999998755433221112335688999999999999999
Q ss_pred CcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHH
Q 006776 437 GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEV 516 (631)
Q Consensus 437 g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eI 516 (631)
+++++.|+.|||+|+| |+++.||+++++.+... .+|||+|||+|+++++|++++.||.||+||++|++|+|.+|
T Consensus 384 ~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~----~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~I 457 (547)
T PRK13295 384 GAPLPAGQIGRLQVRG--CSNFGGYLKRPQLNGTD----ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEI 457 (547)
T ss_pred CCCCCCCCCCeEEEEc--CcccccccCCccccccC----CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHH
Confidence 9999999999999999 99999999998876554 47899999999999999999999999999999999999999
Q ss_pred HHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHh-hcCCCccCceEEECCCCCCCCCchhh
Q 006776 517 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRSGKIM 595 (631)
Q Consensus 517 E~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~-~l~~~~~p~~i~~v~~lP~t~sGKi~ 595 (631)
|++|.+|++|.+++|++++++..++.++++|++.++...+ .+++.+++++ .++++++|..++++++||+|.+||++
T Consensus 458 E~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~ 534 (547)
T PRK13295 458 EALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQSLD---FEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQ 534 (547)
T ss_pred HHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCCCC---HHHHHHHHHhccCccccCCcEEEEeccCCCCCCcccc
Confidence 9999999999999999999988889999999988765443 4678888986 79999999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 006776 596 RRILRKIASRQ 606 (631)
Q Consensus 596 r~~l~~~~~~~ 606 (631)
|+.|+++++++
T Consensus 535 r~~L~~~~~~~ 545 (547)
T PRK13295 535 KFRLREMLRGE 545 (547)
T ss_pred HHHHHHHHhcC
Confidence 99999988764
No 19
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.7e-71 Score=615.86 Aligned_cols=527 Identities=18% Similarity=0.203 Sum_probs=408.3
Q ss_pred chhHhhhhhhhhhccCCCCeeEEEEEc---CCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHH
Q 006776 51 ITNICYNCLDRNIEAGLGDKVAIYWEA---NDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAM 127 (631)
Q Consensus 51 ~~n~~~~~l~~~~~~~~~~~~A~~~~~---~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~ 127 (631)
...++.+++++++. .+|+++|+.+.. ...+..+.+||+||.+++.++|++|.++|+++||+|+|+++|+++|++++
T Consensus 42 ~~~tl~~~l~~~a~-~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 42 EIGTLHDNFVYAVE-TFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCHHHHHHHHHH-hCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 33457788998888 799999996531 11123467999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc
Q 006776 128 LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 207 (631)
Q Consensus 128 lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 207 (631)
|||+++|++++|+++.++.+++.++|++++++++|+++... ..+..+...+ +.++.+++++......
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~---------~~~~~~~~~~----~~l~~ii~~~~~~~~~ 187 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTL---------NTLLSCLSEI----PSVRLIVVVGGADEPL 187 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHH---------HHHHHHhhcC----CCceEEEEECCCchhh
Confidence 99999999999999999999999999999999999975421 2233333333 5666666653211000
Q ss_pred cccCc-CCCCCccchhhhcccCCC-CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEE
Q 006776 208 RENTK-WQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 285 (631)
Q Consensus 208 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~ 285 (631)
.... ........|+++...... ..+.....++++++|+|||||||.||||++||++++.+.. .....+++.++|++
T Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~-~~~~~~~~~~~d~~ 265 (651)
T PLN02736 188 -PSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVA-GSSLSTKFYPSDVH 265 (651)
T ss_pred -hhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHH-HHHhccCCCCCCEE
Confidence 0000 000112345555433211 1122235679999999999999999999999999654443 33456788899999
Q ss_pred EEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCcc----------
Q 006776 286 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY---------- 355 (631)
Q Consensus 286 ~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~---------- 355 (631)
++.+|++|+++.. .++.+++.|++++++++ ++..+++.|+++++|+++++|++++.+.+.....
T Consensus 266 l~~lPl~h~~~~~-~~~~~l~~G~~i~~~~~-----~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~ 339 (651)
T PLN02736 266 ISYLPLAHIYERV-NQIVMLHYGVAVGFYQG-----DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKER 339 (651)
T ss_pred EEeCCHHHHHHHH-HHHHHHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHH
Confidence 9999999999975 56788999999998764 5678999999999999999999998886531000
Q ss_pred ------------------cc-----------ccCC-CceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccce
Q 006776 356 ------------------VT-----------RYSR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGF 405 (631)
Q Consensus 356 ------------------~~-----------~~~l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~ 405 (631)
.. +..+ +++|.+++||+++++++.+++.+.+| +++++.||+||+++.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g---~~~~~~YG~TE~~~~ 416 (651)
T PLN02736 340 LFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG---GRVLEGYGMTETSCV 416 (651)
T ss_pred HHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC---CCeEEEechHHhchh
Confidence 00 0011 48999999999999999999998887 789999999999876
Q ss_pred ecccCCCCCCCCCCCcCCCcCCCceEEeCC-CCc---ccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEe
Q 006776 406 MITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGV---EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYF 481 (631)
Q Consensus 406 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~g~---~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~ 481 (631)
++...+. ...++++|.|+||++++|+|. ++. ....++.|||+++| |+++.|||++++.+...+.. +|||+
T Consensus 417 ~~~~~~~--~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrg--p~v~~GY~~~~~~t~~~~~~--dgw~~ 490 (651)
T PLN02736 417 ISGMDEG--DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRG--PIIFKGYYKDEVQTREVIDE--DGWLH 490 (651)
T ss_pred eeccCCC--CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecC--CccccccccCHHHHHhhhcc--CCCee
Confidence 6544332 246789999999999999984 322 12233469999999 99999999999988777643 79999
Q ss_pred cCceEEEccCCeEEEEeecCCeEec-CceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCC--------
Q 006776 482 TGDGCSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG-------- 552 (631)
Q Consensus 482 TGDl~~~~~dG~l~i~GR~dd~i~~-~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~-------- 552 (631)
|||+|++|+||+++|+||.||+||+ +|++|+|.|||++|.+||.|.+|+|+|. ..++.++|+|++++.
T Consensus 491 TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~ 567 (651)
T PLN02736 491 TGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAAS 567 (651)
T ss_pred ccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHH
Confidence 9999999999999999999999998 5999999999999999999999999983 357789999998652
Q ss_pred --CCC--------cHHHHHHHHHHHH-----hhcCCCccCceEEECCCCC------CCCCchhhHHHHHHHHhcCcCCCC
Q 006776 553 --VPY--------SEELRKSLVLAVR-----KQIGAFAAPDKIHWAPGLP------KTRSGKIMRRILRKIASRQLDELG 611 (631)
Q Consensus 553 --~~~--------~~~~~~~i~~~~~-----~~l~~~~~p~~i~~v~~lP------~t~sGKi~r~~l~~~~~~~~~~~~ 611 (631)
.+. ..++.+.|.+.++ ++|+.+++|+.|+++++.| +|++||++|+.|++.|.+++++++
T Consensus 568 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~~y 647 (651)
T PLN02736 568 EGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISDMY 647 (651)
T ss_pred cCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHHHH
Confidence 110 1122233333332 2599999999999999886 699999999999999988776554
No 20
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.8e-70 Score=602.49 Aligned_cols=515 Identities=21% Similarity=0.221 Sum_probs=407.6
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.++|++++. .+|+++|++.. .+.+||+||.+++.++|++|.++|+++||+|+++++|++++++++|||+++|
T Consensus 9 ~~~~~~~~~~-~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 9 ICQCLTRLAT-LRGNAVVTISG------NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred HHHHHHHHHH-hcCCceEEecC------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 4466777777 79999999842 4689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHH-HHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAAL-DECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
++++|+++.++.+++.+++++++++++++++.... ...... ..+ +.++.+++...... ....
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~----~~~~~~i~~~~~~~----~~~~ 144 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSS---------WYEELQNDRL----PSLMWQVFLESPSS----SVFI 144 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccch---------HHHHHhhccC----CceeEEEEecCccc----cccc
Confidence 99999999999999999999999999999865321 111110 111 33444443332110 0000
Q ss_pred CCCCccchhhhcccC-CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccc
Q 006776 214 QDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 292 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 292 (631)
.......+++..... ..........++++++|+|||||||.||+|+++|++++.+.... ...+++.++|+++..+|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~-~~~~~~~~~d~~l~~~pl~ 223 (563)
T PLN02860 145 FLNSFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAK-IAIVGYGEDDVYLHTAPLC 223 (563)
T ss_pred chhhccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHH-HhhcCCCCCCEEEEecCch
Confidence 000000111111110 00000112357899999999999999999999999966544433 3357889999999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|+.|+. .++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|++..........+++||.+++||+
T Consensus 224 h~~g~~-~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~ 298 (563)
T PLN02860 224 HIGGLS-SALAMLMVGACHVLLPK----FDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGG 298 (563)
T ss_pred hhccHH-HHHHHHHcCceEEecCC----CCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCC
Confidence 999874 56888999999998754 4889999999999999999999999999876432222346789999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC---------------------CCCCCCCcCCCcCCCceE
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---------------------WPQKPGSATFPFFGVQPV 431 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~---------------------~~~~~~~~G~p~~~~~~~ 431 (631)
++++++.+++.+.++ ++++++.||+||+++.++...... ......++|+|+++++++
T Consensus 299 ~l~~~~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~ 376 (563)
T PLN02860 299 SLSSRLLPDAKKLFP--NAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELK 376 (563)
T ss_pred cCCHHHHHHHHHhcC--CCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEE
Confidence 999999999999986 478999999999986544221110 001123689999999999
Q ss_pred EeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceee
Q 006776 432 IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRI 511 (631)
Q Consensus 432 i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i 511 (631)
|+|++ .|+.|||+++| |+++.|||++++.+...+.. +|||+|||+|++|+||+++++||+||+||++|++|
T Consensus 377 i~~~~-----~g~~Gel~v~g--~~~~~GY~~~~~~t~~~~~~--~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v 447 (563)
T PLN02860 377 IGLDE-----SSRVGRILTRG--PHVMLGYWGQNSETASVLSN--DGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENV 447 (563)
T ss_pred EecCC-----CCceeEEEEec--CcccccccCCccccchhccC--CCeEEccceEEEcCCCCEEEeecccceeEECCEEc
Confidence 99876 56789999999 99999999999877766543 79999999999999999999999999999999999
Q ss_pred chHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCC-----------cHHHHHHHHHHHHh-hcCCCccCce
Q 006776 512 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY-----------SEELRKSLVLAVRK-QIGAFAAPDK 579 (631)
Q Consensus 512 ~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~-----------~~~~~~~i~~~~~~-~l~~~~~p~~ 579 (631)
+|.|||++|.+||+|.+++|++++++..++.++++|+++++... .....++|++++++ +|++|++|+.
T Consensus 448 ~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~ 527 (563)
T PLN02860 448 YPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKL 527 (563)
T ss_pred cHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceE
Confidence 99999999999999999999999998889999999998875210 01125678899987 5999999998
Q ss_pred EEEC-CCCCCCCCchhhHHHHHHHHhcCcCCC
Q 006776 580 IHWA-PGLPKTRSGKIMRRILRKIASRQLDEL 610 (631)
Q Consensus 580 i~~v-~~lP~t~sGKi~r~~l~~~~~~~~~~~ 610 (631)
++++ ++||+|++||++|+.|++++.+....+
T Consensus 528 ~~~~~~~lP~t~~GKi~r~~L~~~~~~~~~~~ 559 (563)
T PLN02860 528 FVQWRKPFPLTTTGKIRRDEVRREVLSHLQSL 559 (563)
T ss_pred EEEEecCCCCCcccchhHHHHHHHHHHHHhcc
Confidence 8765 679999999999999999998876554
No 21
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.6e-71 Score=526.01 Aligned_cols=507 Identities=23% Similarity=0.334 Sum_probs=431.5
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.++|.++++ .+||++|++.. .+.+||+||.+++.++|..|+++|+++||+|.+.+||..++++++||++++|
T Consensus 30 l~d~L~~~A~-~~pdriAv~d~------~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlG 102 (542)
T COG1021 30 LTDILTDHAA-RYPDRIAVIDG------ERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLG 102 (542)
T ss_pred HHHHHHHHHh-hcCCceEEecC------cccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcC
Confidence 4577888888 89999999943 5679999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
+++|.--|.....+|....+.++|+.+|.+.... ..+......+.+... +.++++++..+....
T Consensus 103 v~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~----gFd~~~~ar~~~a~~----~tlr~v~v~ge~~~~-------- 166 (542)
T COG1021 103 VAPVLALPSHRASELGAFASQIEAALLIVARQHS----GFDYRPFARELVAKH----PTLRHVIVAGEAEHP-------- 166 (542)
T ss_pred cchhhccchhhHHHHHHHHHhhcchheeechhhc----ccCcHHHHHHHHhhC----CcceEEEEccCCCCc--------
Confidence 9999999999999999999999999999876431 223444445555544 888999887543210
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
...+..+-.......+..+.+++++++...|.||||.||-|..||..|..+...+.. .+++...+++++.+|..|-
T Consensus 167 ---~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaE-iC~~~~~tvyL~~LP~AHN 242 (542)
T COG1021 167 ---SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAE-ICGFDQQTVYLCALPAAHN 242 (542)
T ss_pred ---chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhh-hhCcCccceEEEecccccC
Confidence 001111111112223344567889999999999999999999999998777666654 6889999999999999998
Q ss_pred cchh-HHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 295 TGHS-YVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 295 ~g~~-~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
+.++ -..++.++.|+++|+.+. ++++..+.+|++++||+...+|.+...+++..+. ...+|+|||.+-+||+.
T Consensus 243 fplssPG~LGv~~agG~VVla~~----psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~--~~~~LsSLrllQVGGar 316 (542)
T COG1021 243 FPLSSPGALGVFLAGGTVVLAPD----PSPELCFPLIERHGVTVTALVPPLASLWLQAAEW--ERADLSSLRLLQVGGAR 316 (542)
T ss_pred CCCCCcchhheeeeccEEEECCC----CCHHHHHHHHHHhccceEEeccHHHHHHHHhhhc--ccCCchheeEEeecCcc
Confidence 7543 246888999999999876 4889999999999999999999999999998764 56789999999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCc-CCCceEEeCCCCcccCCCcceeEEEec
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPF-FGVQPVIVDEKGVEIEGECSGYLCIKS 452 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~-~~~~~~i~d~~g~~~~~g~~Gel~v~~ 452 (631)
+++.+.+++...+| |.+-+.|||.|--...+ -..+..+.-..+-|+|+ |.=+++|+|.+|+++++|+.|+|..+|
T Consensus 317 l~~~~Arrv~~~lg---C~LQQVFGMAEGLvnyT-RLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~G~LltRG 392 (542)
T COG1021 317 LSATLARRVPAVLG---CQLQQVFGMAEGLVNYT-RLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEVGELLTRG 392 (542)
T ss_pred cCHHHHhhchhhhC---chHHHHhhhhhhhhccc-ccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCcceeeecC
Confidence 99999999999998 89999999999554333 22222334556789988 678999999999999999999999999
Q ss_pred CCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEE
Q 006776 453 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 532 (631)
Q Consensus 453 ~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv 532 (631)
|..+.|||+.++.+.+.|.. +|+|+|||++++|+||++.+.||.+|+|+.+|++|-.+|||+.|.+||.|.+|++|
T Consensus 393 --PYTirGYyrap~HNa~aF~a--~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlV 468 (542)
T COG1021 393 --PYTIRGYYRAPEHNARAFDA--DGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALV 468 (542)
T ss_pred --CeeeeeeccCchhhhhccCc--CCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhh
Confidence 99999999999988888876 89999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhh-cCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 533 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 533 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
+.+|+..||+.++||+.++... + ..++++++++. +..+++|++|.+++.+|.|+-|||+++.||+.+...
T Consensus 469 ampDelLGEksCAfiv~~~~~~-~---~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~ 539 (542)
T COG1021 469 AMPDELLGEKSCAFIVVKEPPL-R---AAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASR 539 (542)
T ss_pred cCchhhcCcceeEEEEecCCCC-C---HHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhh
Confidence 9999999999999999987642 2 56788888765 889999999999999999999999999999987643
No 22
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=5e-70 Score=598.56 Aligned_cols=511 Identities=22% Similarity=0.334 Sum_probs=413.9
Q ss_pred chhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCChHHHHHHHH
Q 006776 51 ITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLA 129 (631)
Q Consensus 51 ~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gv~~gd~V~i~~~n~~~~~v~~lA 129 (631)
.++.+..++++ . .+|+++|+++.. ....+||+||.+++.++|++|.+ .|+++||+|+++++|++++++++||
T Consensus 39 ~~~~~~~l~~~--~-~~~~~~a~~~~~----~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la 111 (560)
T PLN02574 39 NLDAVSFIFSH--H-NHNGDTALIDSS----TGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLA 111 (560)
T ss_pred CCCHHHHHhcC--c-ccCCCCEEEECC----CCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHH
Confidence 35666777776 3 589999999542 23479999999999999999998 9999999999999999999999999
Q ss_pred HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccc
Q 006776 130 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE 209 (631)
Q Consensus 130 ~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 209 (631)
|+++|++++|++|.++.+++.++++.++++++++++... ..+ .. ..+. ++.+.....
T Consensus 112 ~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~----~~-----~~~~-~~~~~~~~~---- 168 (560)
T PLN02574 112 VLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENV---------EKL----SP-----LGVP-VIGVPENYD---- 168 (560)
T ss_pred HHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHH---------HHH----Hh-----cCCc-EEecCcccc----
Confidence 999999999999999999999999999999999876421 111 11 1111 222211000
Q ss_pred cCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHH---hcC-CCCCcEE
Q 006776 210 NTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY---AFD-YKPSDVY 285 (631)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~---~~~-~~~~d~~ 285 (631)
..........|.++........+.....++++++|+|||||||.||||+++|++++.+....... .+. ....+++
T Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (560)
T PLN02574 169 -FDSKRIEFPKFYELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVY 247 (560)
T ss_pred -cccCccCcccHHHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEE
Confidence 00000111223333332222222223467899999999999999999999999966544332211 122 2346788
Q ss_pred EEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCcee
Q 006776 286 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 365 (631)
Q Consensus 286 ~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr 365 (631)
+..+|++|++|+...++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|.+.... ....+++++|
T Consensus 248 l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~~~lr 322 (560)
T PLN02574 248 LAALPMFHIYGLSLFVVGLLSLGSTIVVMRR----FDASDMVKVIDRFKVTHFPVVPPILMALTKKAKG-VCGEVLKSLK 322 (560)
T ss_pred EEecchHHHHHHHHHHHHHHhcCCEEEEecC----CCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccc-cccCccccce
Confidence 9999999999987777788889999998764 4899999999999999999999999999887432 1245688999
Q ss_pred EEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeC-CCCcccCCCc
Q 006776 366 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGEC 444 (631)
Q Consensus 366 ~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~ 444 (631)
.+++||+++++++++++.+.++ ++++++.||+||++.+.+..........++++|.|+++++++|+| ++|++++.|+
T Consensus 323 ~~~~gg~~l~~~~~~~~~~~~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~ 400 (560)
T PLN02574 323 QVSCGAAPLSGKFIQDFVQTLP--HVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGN 400 (560)
T ss_pred EEEEecccCCHHHHHHHHHHCC--CCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCC
Confidence 9999999999999999999886 478999999999986554322222224568899999999999999 5899999999
Q ss_pred ceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCc
Q 006776 445 SGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHP 524 (631)
Q Consensus 445 ~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~ 524 (631)
.|||+|+| |+++.|||++++.+...+.. +|||+|||+|++|+||+++++||.||+||++|++|++.|||++|.+||
T Consensus 401 ~Gei~v~g--~~~~~GY~~~~~~t~~~~~~--~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~ 476 (560)
T PLN02574 401 CGELWIQG--PGVMKGYLNNPKATQSTIDK--DGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHP 476 (560)
T ss_pred CeEEEEEC--cchhhhhcCChhHhhhhccC--CCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCC
Confidence 99999999 99999999999888776643 799999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHh
Q 006776 525 QCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 525 ~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~ 604 (631)
+|.+++|++++++..++.++++|+.+++...+ .+++.++++++|++++.|+.++++++||+|++||++|+.|++.+.
T Consensus 477 ~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~ 553 (560)
T PLN02574 477 EIIDAAVTAVPDKECGEIPVAFVVRRQGSTLS---QEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLT 553 (560)
T ss_pred CcceEEEEccccCCCCcceEEEEEeCCCCCCC---HHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHh
Confidence 99999999999988889999999987665544 468999999999999999999999999999999999999999986
Q ss_pred cC
Q 006776 605 RQ 606 (631)
Q Consensus 605 ~~ 606 (631)
+.
T Consensus 554 ~~ 555 (560)
T PLN02574 554 NS 555 (560)
T ss_pred hc
Confidence 53
No 23
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-69 Score=609.62 Aligned_cols=485 Identities=22% Similarity=0.317 Sum_probs=402.7
Q ss_pred hhhhhhhhhcc-CCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 55 CYNCLDRNIEA-GLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 55 ~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
+.++|.+++.. .+|+++|++.. ..+||+||+++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 6 ~~~~~~~~a~~~~~pd~~a~~~~-------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~a 78 (705)
T PRK06060 6 LAGLLAEQASEAGWYDRPAFYAA-------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLAR 78 (705)
T ss_pred HHHHHHHHHhhccCCCceEEEec-------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 34666777651 27999999742 36999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|.++.+++.+++++++++++|+++......... .++....
T Consensus 79 G~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---------------------~~~~~~~----------- 126 (705)
T PRK06060 79 GVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS---------------------RVAEAAE----------- 126 (705)
T ss_pred CcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc---------------------ccchhhh-----------
Confidence 99999999999999999999999999999876432110000 0000000
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.+.+.....+ .......++++++|+|||||||.||||+++|++++.+........+++.++|++++.++++|
T Consensus 127 ------~~~~~~~~~~--~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 198 (705)
T PRK06060 127 ------LMSEAARVAP--GGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYF 198 (705)
T ss_pred ------hhhhccccCC--CCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchh
Confidence 0000000000 01112456899999999999999999999999966554433334577889999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..++...++.++..|+++++.+.. .++..++..++++++|+++++|+++..+++... ..++++||.+++|||+
T Consensus 199 ~~~~~~~~~~~l~~G~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~----~~~~~slr~i~~gGe~ 271 (705)
T PRK06060 199 AYGLGNSVWFPLATGGSAVINSAP---VTPEAAAILSARFGPSVLYGVPNFFARVIDSCS----PDSFRSLRCVVSAGEA 271 (705)
T ss_pred hcchhHHHHHHHhcCCEEEEeCCC---CCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc----cccccceeEEEEecCc
Confidence 888766778899999999997532 467888999999999999999999999987542 2356899999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecC
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 453 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~ 453 (631)
+++++.+++.+.++ ++++++.||+||++..+...... ...++++|+|+++++++|+|++|++++.|+.|||+|+|
T Consensus 272 l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~GEl~i~g- 346 (705)
T PRK06060 272 LELGLAERLMEFFG--GIPILDGIGSTEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVAPDGTTAGPGVEGDLWVRG- 346 (705)
T ss_pred CCHHHHHHHHHHcC--CCceEeeeeccccCceEEeccCC--CCCcCcccccCCCcEEEEECCCCCCCCCCCceEEEEcc-
Confidence 99999999999987 47899999999998655433221 23567899999999999999999999999999999999
Q ss_pred CCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEe
Q 006776 454 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVG 533 (631)
Q Consensus 454 ~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~ 533 (631)
|+++.|||++++.+. ..+|||+|||+|++++||+++++||+||+||++|++|+|.|||++|.+||.|.+++|++
T Consensus 347 -~~v~~GY~~~~~~~~-----~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~ 420 (705)
T PRK06060 347 -PAIAKGYWNRPDSPV-----ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVA 420 (705)
T ss_pred -chhhhhhhCCCcccc-----cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999987542 13789999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHh
Q 006776 534 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 534 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~ 604 (631)
++++..++.++++|+..++...+.+...+|+++++++|+.|++|..|+++++||+|.+||++|+.|++.+.
T Consensus 421 ~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 421 VRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred ecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhcc
Confidence 99888888999999987665555555678999999999999999999999999999999999999998753
No 24
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.2e-69 Score=589.53 Aligned_cols=505 Identities=18% Similarity=0.168 Sum_probs=392.5
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
+.+.+.+.+++. .+|+++|+++. ..+++||+||.+++.++|+.|.+ .+||+|+++++|++++++++|||++
T Consensus 19 ~~~~~~~~~~~~-~~p~~~a~~~~-----~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~ 89 (539)
T PRK06334 19 KTVLESFLKLCS-EMTTATVCWDE-----QLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLL 89 (539)
T ss_pred CcHHHHHHHHHH-hCCCceEEEeC-----CCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHh
Confidence 345566777777 79999998753 13689999999999999999987 3899999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCc
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 212 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 212 (631)
+|++++|+++.++.+++.++|++++++++|+++... ..+.+...... .....++.+..... ...
T Consensus 90 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~---~~~~~~i~~~~~~~----~~~ 153 (539)
T PRK06334 90 SGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLM---------QHLAQTHGEDA---EYPFSLIYMEEVRK----ELS 153 (539)
T ss_pred cCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHH---------HHHhhhhhccc---cccccEEEEehhhh----hcc
Confidence 999999999999999999999999999999875422 11111111000 00112333221100 000
Q ss_pred CCCCCccchhhhcccC----CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEe
Q 006776 213 WQDGRDIWWQDVVPKY----PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCT 288 (631)
Q Consensus 213 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~ 288 (631)
+.. ........... ..........++++++|+|||||||.||||+++|++++.+.. .....+++.++|++++.
T Consensus 154 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~~ 230 (539)
T PRK06334 154 FWE--KCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQR-ACLKFFSPKEDDVMMSF 230 (539)
T ss_pred HHH--hhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHH-HHHHhcCCCCCceEEEe
Confidence 000 00000000000 000111235679999999999999999999999999655443 33446788899999999
Q ss_pred cccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEE
Q 006776 289 ADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLG 368 (631)
Q Consensus 289 ~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~ 368 (631)
+|++|++|+...++.++..|+++++.... +++..+++.|+++++|++.++|++++.|++.... ...++++||.++
T Consensus 231 ~p~~h~~g~~~~~~~~l~~G~~vv~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~lr~i~ 305 (539)
T PRK06334 231 LPPFHAYGFNSCTLFPLLSGVPVVFAYNP---LYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKK--QESCLPSLRFVV 305 (539)
T ss_pred cchHhhhhhHHHHHHHHHcCCeEEEecCC---CCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhh--cccccccccEEE
Confidence 99999999876778899999999886532 4889999999999999999999999999876432 234678999999
Q ss_pred EccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCC-CCcccCCCccee
Q 006776 369 SVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGY 447 (631)
Q Consensus 369 ~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Ge 447 (631)
+||+++++++.+++.+.++ ++.+++.||+||++.+++..... .....+++|+|++|++++|+|+ ++.+++.|+.||
T Consensus 306 ~gG~~l~~~~~~~~~~~~~--~~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Ge 382 (539)
T PRK06334 306 IGGDAFKDSLYQEALKTFP--HIQLRQGYGTTECSPVITINTVN-SPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGL 382 (539)
T ss_pred ECCccCCHHHHHHHHHHCC--CCeEEecccccccCceEEeccCC-CCCCCCcCceecCCCEEEEEcCCCCccCCCCceEE
Confidence 9999999999999999986 47899999999998766543322 2234567999999999999996 578999999999
Q ss_pred EEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccc
Q 006776 448 LCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCA 527 (631)
Q Consensus 448 l~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~ 527 (631)
|+|+| |+++.|||++++..... ....+|||+|||+|++|++|++++.||.||+||++|++|+|.|||++|.+||+|.
T Consensus 383 l~v~g--~~~~~GY~~~~~~~~~~-~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~ 459 (539)
T PRK06334 383 VLTRG--TSLFSGYLGEDFGQGFV-ELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQN 459 (539)
T ss_pred EEEec--CcccccccCCcccccce-eeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCc
Confidence 99999 99999999998753221 1123679999999999999999999999999999999999999999999999999
Q ss_pred e------EEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhh-cCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 528 E------AAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 528 ~------~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
+ ++|++++++ ...++++++.. .+ .++++++|++. ++.|++|+.++++++||+|++||++|+.|+
T Consensus 460 ~~~~~~~~~v~~~~~~--~~~~~~~~~~~----~~---~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~ 530 (539)
T PRK06334 460 AADHAGPLVVCGLPGE--KVRLCLFTTFP----TS---ISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLN 530 (539)
T ss_pred cccccCceEEEcCCCC--ceEEEEEEecc----CC---hHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHH
Confidence 8 788877743 23455555432 12 45788889886 788999999999999999999999999999
Q ss_pred HHHhc
Q 006776 601 KIASR 605 (631)
Q Consensus 601 ~~~~~ 605 (631)
++...
T Consensus 531 ~~~~~ 535 (539)
T PRK06334 531 ALAKS 535 (539)
T ss_pred HHHHH
Confidence 98654
No 25
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-69 Score=586.63 Aligned_cols=492 Identities=24% Similarity=0.296 Sum_probs=405.5
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.++|.++++ .+|+++|+++. .+++||.||.++++++|++|.++|+++||+|+++++|++++++++|||+++|
T Consensus 45 ~~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 117 (537)
T PRK13382 45 PTSGFAIAAQ-RCPDRPGLIDE------LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIG 117 (537)
T ss_pred HHHHHHHHHH-hCCCCeEEEeC------CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcC
Confidence 5677888887 79999999853 4689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|+++.++.+++.++++.++++++|++.... ..++.+.... +....++......
T Consensus 118 ~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~---------- 174 (537)
T PRK13382 118 ADILLLNTSFAGPALAEVVTREGVDTVIYDEEFS---------ATVDRALADC----PQATRIVAWTDED---------- 174 (537)
T ss_pred cEEEecCcccCHHHHHHHHHhcCCCEEEEchhhH---------HHHHHHHhhc----cccceEEEecCCc----------
Confidence 9999999999999999999999999999976432 2222222211 2223333222110
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
....+..+........+ ...++++++++|||||||.||||+++|.+++.... .....+.+.++++++..+|++|.
T Consensus 175 --~~~~~~~~~~~~~~~~~--~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~~~ 249 (537)
T PRK13382 175 --HDLTVEVLIAAHAGQRP--EPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLK-AILDRTPWRAEEPTVIVAPMFHA 249 (537)
T ss_pred --ccccHHHHhhccCcCCC--CCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHH-HHHHhhCCCCCCeEEEecChHhh
Confidence 01123333221111111 13467899999999999999999999988554443 33345677889999999999999
Q ss_pred cchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCC
Q 006776 295 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 374 (631)
Q Consensus 295 ~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l 374 (631)
.|+ ..++.++..|+++++... ++++.+++.|+++++|++.++|++++.|++.........+++++|.+++||+++
T Consensus 250 ~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l 324 (537)
T PRK13382 250 WGF-SQLVLAASLACTIVTRRR----FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRM 324 (537)
T ss_pred hHH-HHHHHHHhcCcEEEECCC----cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCC
Confidence 886 567888999999988643 589999999999999999999999999987643323344567999999999999
Q ss_pred CHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCC
Q 006776 375 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 454 (631)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~ 454 (631)
++++++.+.+.++ .++++.||+||++.++..... .....++++|+|++++.++|+|+++++++.|+.|||+++|
T Consensus 325 ~~~~~~~~~~~~~---~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g-- 398 (537)
T PRK13382 325 RPDVVIAFMDQFG---DVIYNNYNATEAGMIATATPA-DLRAAPDTAGRPAEGTEIRILDQDFREVPTGEVGTIFVRN-- 398 (537)
T ss_pred CHHHHHHHHHHcC---CcEEecccccccCcceecChh-HhccCCCCccccCcCcEEEEECCCCCCCCCCCeeEEEEEc--
Confidence 9999999999987 579999999999876553322 2235678999999999999999999999999999999999
Q ss_pred CcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEee
Q 006776 455 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 534 (631)
Q Consensus 455 p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~ 534 (631)
|+++.||+ ++.+.. + .+|||+|||++++++||++++.||+||+||.+|++|+|.+||++|.+||+|.+++|+++
T Consensus 399 ~~~~~gY~--~~~~~~-~---~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~ 472 (537)
T PRK13382 399 DTQFDGYT--SGSTKD-F---HDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGV 472 (537)
T ss_pred CCcccCcc--ccchhh-c---cCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEcc
Confidence 99999998 332222 2 27999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHH
Q 006776 535 EHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 601 (631)
Q Consensus 535 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~ 601 (631)
+++..++.++++|++.++.... .++|+++++++|+.+++|..++++++||+|++||++|+.|++
T Consensus 473 ~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 473 DDEQYGQRLAAFVVLKPGASAT---PETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred CccccCCEEEEEEEECCCCCCC---HHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 9988889999999987765443 578999999999999999999999999999999999999874
No 26
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8.5e-70 Score=603.96 Aligned_cols=529 Identities=18% Similarity=0.245 Sum_probs=399.6
Q ss_pred hhHhhhhhhhhhccCCCCeeEEEEEcC---CCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHH
Q 006776 52 TNICYNCLDRNIEAGLGDKVAIYWEAN---DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAML 128 (631)
Q Consensus 52 ~n~~~~~l~~~~~~~~~~~~A~~~~~~---~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~l 128 (631)
++++.++++++++ .+|+++|+++... ..+....+||+||.++++++|++|.++|+++||+|+|+++|+++|++++|
T Consensus 44 ~~t~~~~l~~~a~-~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~l 122 (666)
T PLN02614 44 MDSCWDVFRMSVE-KYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISME 122 (666)
T ss_pred CCcHHHHHHHHHH-hCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4567789999888 7999999986421 11223568999999999999999999999999999999999999999999
Q ss_pred HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccc
Q 006776 129 ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 208 (631)
Q Consensus 129 A~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 208 (631)
||+++|++++|+++.++.+++.++|++++++++|+++... ..+...+....+.++.++.++.......
T Consensus 123 A~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~------------~~~~~~~~~~~~~l~~vi~~~~~~~~~~ 190 (666)
T PLN02614 123 ACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKI------------SELFKTCPNSTEYMKTVVSFGGVSREQK 190 (666)
T ss_pred HHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHH------------HHHHHhcccccccceEEEEeCCCChHHh
Confidence 9999999999999999999999999999999999875321 1111111110123566665542110000
Q ss_pred ccCcCCCCCccchhhhcccCC-CCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHh----cCCCCCc
Q 006776 209 ENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA----FDYKPSD 283 (631)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~----~~~~~~d 283 (631)
............|+++..... ...+.....++|+++|+|||||||.||||++||++++.......... .++.++|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d 270 (666)
T PLN02614 191 EEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKD 270 (666)
T ss_pred hhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCc
Confidence 000000001133555443211 11112234679999999999999999999999999665443322211 2577899
Q ss_pred EEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccc-------
Q 006776 284 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV------- 356 (631)
Q Consensus 284 ~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~------- 356 (631)
++++++|++|+++.. ..+..+..|+++++.. .++..+++.|++++||+++++|++++.|.+......
T Consensus 271 ~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~ 344 (666)
T PLN02614 271 VYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR-----GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLK 344 (666)
T ss_pred EEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHH
Confidence 999999999999874 3466688999998874 278899999999999999999999998864210000
Q ss_pred ----------------------cc-------------cCC-CceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccc
Q 006776 357 ----------------------TR-------------YSR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQT 400 (631)
Q Consensus 357 ----------------------~~-------------~~l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~t 400 (631)
.. ..+ ++||.+++||+++++.+ +.+.+.++ ++++++.||+|
T Consensus 345 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~--~~~i~~~YG~T 421 (666)
T PLN02614 345 KFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVA--CCHVLQGYGLT 421 (666)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhc--CCCEEeeCchH
Confidence 00 011 68999999999999875 56666665 47899999999
Q ss_pred cccceecccCCCCCCCCCCCcCCCcCCCceEEeC-CC--CcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCC
Q 006776 401 ETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EK--GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFP 477 (631)
Q Consensus 401 E~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~--g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~ 477 (631)
|+++..+...+.. ..+++++|+|+||++++|+| ++ +.+++.|+.|||+|+| |+++.|||++++.+...+. +
T Consensus 422 E~~~~~~~~~~~~-~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrG--p~v~~GY~~~pe~T~~~f~---d 495 (666)
T PLN02614 422 ESCAGTFVSLPDE-LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRG--KTLFSGYYKREDLTKEVLI---D 495 (666)
T ss_pred hhhhheeeecccc-CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcC--CcccccccCCHHHhhhhhc---c
Confidence 9986554333322 23578999999999999998 33 4788889999999999 9999999999998888763 7
Q ss_pred CeEecCceEEEccCCeEEEEeecCCeEec-CceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCC---
Q 006776 478 GYYFTGDGCSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV--- 553 (631)
Q Consensus 478 g~~~TGDl~~~~~dG~l~i~GR~dd~i~~-~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~--- 553 (631)
|||+|||+|++|+||+++|+||+||+||+ +|++|+|.|||++|.+||.|.+++|+|.+. ...++|+|+++...
T Consensus 496 Gw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~---~~~l~alvv~~~~~~~~ 572 (666)
T PLN02614 496 GWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSF---ESFLVAIANPNQQILER 572 (666)
T ss_pred CCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCC---cceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999997 599999999999999999999999998653 23588888875421
Q ss_pred -------C-------CcHHHHHHHHHHH-----HhhcCCCccCceEEECC-CC-----CCCCCchhhHHHHHHHHhcCcC
Q 006776 554 -------P-------YSEELRKSLVLAV-----RKQIGAFAAPDKIHWAP-GL-----PKTRSGKIMRRILRKIASRQLD 608 (631)
Q Consensus 554 -------~-------~~~~~~~~i~~~~-----~~~l~~~~~p~~i~~v~-~l-----P~t~sGKi~r~~l~~~~~~~~~ 608 (631)
. .+.++.+.|.+.+ ++.|+.+.+++.|.+++ .+ -.|+++|+.|+.+.+.|.+.++
T Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~ 652 (666)
T PLN02614 573 WAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVID 652 (666)
T ss_pred HHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHH
Confidence 1 0123344444443 35699999999998876 33 3799999999999999998877
Q ss_pred CCC
Q 006776 609 ELG 611 (631)
Q Consensus 609 ~~~ 611 (631)
+++
T Consensus 653 ~ly 655 (666)
T PLN02614 653 EMY 655 (666)
T ss_pred HHH
Confidence 765
No 27
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.4e-68 Score=584.90 Aligned_cols=504 Identities=24% Similarity=0.357 Sum_probs=415.3
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+++.+++. .+|+++|+++.. ..+++||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 25 ~~~~l~~~~~-~~~~~~a~~~~~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G 99 (537)
T PLN02246 25 LHDYCFERLS-EFSDRPCLIDGA----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRG 99 (537)
T ss_pred HHHHHHHHHH-hCCCCeEEEecC----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 3355555665 699999998542 24689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|+++.++.+++..+++.++++++|+++... ..+.+.... +.+ .++.++...
T Consensus 100 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~-----~~~-~~i~~~~~~---------- 154 (537)
T PLN02246 100 AVTTTANPFYTPAEIAKQAKASGAKLIITQSCYV---------DKLKGLAED-----DGV-TVVTIDDPP---------- 154 (537)
T ss_pred EEEecCCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHHHHhhc-----CCc-eEEEeCCCC----------
Confidence 9999999999999999999999999999876532 112221110 222 233332211
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHH---HhcCCCCCcEEEEeccc
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDYKPSDVYWCTADC 291 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~---~~~~~~~~d~~~~~~~~ 291 (631)
.....+.++........+.....++++++++|||||||.||+|+++|++++.+...... ..+++.++|++++.+|+
T Consensus 155 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 233 (537)
T PLN02246 155 -EGCLHFSELTQADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPM 233 (537)
T ss_pred -CCceeHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeech
Confidence 01122333332222222333456789999999999999999999999997655443322 14678899999999999
Q ss_pred ceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEcc
Q 006776 292 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 371 (631)
Q Consensus 292 ~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~G 371 (631)
+|.+++...++.++..|+++++.++ .++..+++.|+++++|++.++|+++..|.+... ....+++++|.+++||
T Consensus 234 ~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~gg 307 (537)
T PLN02246 234 FHIYSLNSVLLCGLRVGAAILIMPK----FEIGALLELIQRHKVTIAPFVPPIVLAIAKSPV--VEKYDLSSIRMVLSGA 307 (537)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEeCC----CCHHHHHHHHHHhCceEEEcchHHHHHHhcCcc--ccccCccceeEEEEec
Confidence 9999876777888999999999865 378999999999999999999999999987643 2234678999999999
Q ss_pred CCCCHhHHHHHHHHhCCCCcceecccccccccceecccCC---CCCCCCCCCcCCCcCCCceEEeCC-CCcccCCCccee
Q 006776 372 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP---GAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGY 447 (631)
Q Consensus 372 e~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~---~~~~~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Ge 447 (631)
+++++++.+++.+.++ ++.+++.||+||++.+++.... ......++++|+|+++++++|+|+ ++++++.|+.||
T Consensus 308 ~~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Ge 385 (537)
T PLN02246 308 APLGKELEDAFRAKLP--NAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGE 385 (537)
T ss_pred CcCCHHHHHHHHHHcC--CCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceE
Confidence 9999999999999986 4789999999999865443211 112345678999999999999995 789999999999
Q ss_pred EEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccc
Q 006776 448 LCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCA 527 (631)
Q Consensus 448 l~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~ 527 (631)
|+++| +.++.|||++++.+...+.. +|||+|||+|+++++|++++.||.||+||.+|++|+|.+||++|.+||+|.
T Consensus 386 l~v~g--~~~~~GY~~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~ 461 (537)
T PLN02246 386 ICIRG--PQIMKGYLNDPEATANTIDK--DGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIA 461 (537)
T ss_pred EEEEC--CchhccccCCchhhhhcccC--CCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCee
Confidence 99999 99999999999887766543 789999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHh
Q 006776 528 EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 528 ~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~ 604 (631)
+++|++++++..++.++++|+..++...+ .++|+++|+++++++++|..++++++||+|++||++|+.|++.+.
T Consensus 462 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~ 535 (537)
T PLN02246 462 DAAVVPMKDEVAGEVPVAFVVRSNGSEIT---EDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLA 535 (537)
T ss_pred EEEEEcccCccCCceeEEEEEeCCCCCCC---HHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHh
Confidence 99999999888889999999987765444 568999999999999999999999999999999999999999875
No 28
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-68 Score=584.75 Aligned_cols=519 Identities=20% Similarity=0.242 Sum_probs=417.2
Q ss_pred cccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHH
Q 006776 45 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 124 (631)
Q Consensus 45 ~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~ 124 (631)
.|+.....+.+.++|++++. .+|+++|+++.+ ..+.+||.||.+++.++|++|.+.|+++||+|+++++|+++++
T Consensus 8 ~~~~~~~~~~l~~~l~~~a~-~~p~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~ 82 (534)
T PRK05852 8 APMASDFGPRIADLVEVAAT-RLPEAPALVVTA----DRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFV 82 (534)
T ss_pred cchhhhhcccHHHHHHHHHH-hCCCCcEEEecC----CCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHH
Confidence 67777788889999999888 799999998742 2468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCC
Q 006776 125 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 204 (631)
Q Consensus 125 v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 204 (631)
+++|||+++|++++++++.++.+++.++|++++++++|+++...... .... . ......+.+....
T Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~---------~~~~--~----~~~~~~~~~~~~~ 147 (534)
T PRK05852 83 VALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDR---------AEPT--T----RWWPLTVNVGGDS 147 (534)
T ss_pred HHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchh---------cccc--c----cccceeeeecccc
Confidence 99999999999999999999999999999999999999876432100 0000 0 0011111111100
Q ss_pred ccccccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcE
Q 006776 205 AMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 284 (631)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~ 284 (631)
... ...+ ...+......... ........+++++|+|||||||.||||+++|+++..+. ......+++.++|+
T Consensus 148 ~~~--~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~-~~~~~~~~~~~~d~ 219 (534)
T PRK05852 148 GPS--GGTL----SVHLDAATEPTPA-TSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSV-RAIITGYRLSPRDA 219 (534)
T ss_pred ccc--cccc----ccccccccCCCcc-ccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHH-HHHHHHhCCCCcce
Confidence 000 0000 0001110000000 00111225788999999999999999999999965444 34445678899999
Q ss_pred EEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCce
Q 006776 285 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSL 364 (631)
Q Consensus 285 ~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~l 364 (631)
+++.+|+.|..|+...++.+++.|+++++.... .+++..+++.|+++++|.++++|+++..|.+.........+++++
T Consensus 220 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l 297 (534)
T PRK05852 220 TVAVMPLYHGHGLIAALLATLASGGAVLLPARG--RFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAAL 297 (534)
T ss_pred EEEecCcchhHHHHHHHHHHHhcCCeEEeCCCc--CcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCe
Confidence 999999999999877888999999998885432 247889999999999999999999999998865432223457899
Q ss_pred eEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCC------CCCCCCCCcCCCcCCCceEEeCCCCc
Q 006776 365 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------AWPQKPGSATFPFFGVQPVIVDEKGV 438 (631)
Q Consensus 365 r~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~------~~~~~~~~~G~p~~~~~~~i~d~~g~ 438 (631)
|.+.++|+++++++++++.+.++ +++++.||+||++..++..... ......+..|. .+|++++++|++|+
T Consensus 298 r~i~~~G~~~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~~g~ 373 (534)
T PRK05852 298 RFIRSCSAPLTAETAQALQTEFA---APVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGSDGL 373 (534)
T ss_pred eEEEECCCCCCHHHHHHHHHHhC---CChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECCCCC
Confidence 99999999999999999999997 6899999999998765432211 01112334444 69999999999999
Q ss_pred ccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHH
Q 006776 439 EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVES 518 (631)
Q Consensus 439 ~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~ 518 (631)
+++.|+.|||+++| +.++.|||++++.+...+. +|||+|||+|++|+||++++.||.||+||.+|.+|+|.+||+
T Consensus 374 ~~~~g~~Gel~v~g--~~v~~gY~~~~~~t~~~~~---~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~ 448 (534)
T PRK05852 374 PLPAGAVGEVWLRG--TTVVRGYLGDPTITAANFT---DGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEG 448 (534)
T ss_pred CCCCCCceEEEEec--CcccchhcCCcccchhhhc---CCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHH
Confidence 99999999999999 9999999999988776653 689999999999999999999999999999999999999999
Q ss_pred HHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHH
Q 006776 519 ALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRI 598 (631)
Q Consensus 519 ~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~ 598 (631)
+|.+||+|.+|+|++++++..++.++++|+.++....+ .++|.++|+++|+++++|..++++++||+|++||++|++
T Consensus 449 ~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~---~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~ 525 (534)
T PRK05852 449 VLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPPT---AEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRA 525 (534)
T ss_pred HHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCCC---HHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHH
Confidence 99999999999999999988889999999987654344 578999999999999999999999999999999999999
Q ss_pred HHHHHhc
Q 006776 599 LRKIASR 605 (631)
Q Consensus 599 l~~~~~~ 605 (631)
|++.+..
T Consensus 526 L~~~~~~ 532 (534)
T PRK05852 526 VAEQFGH 532 (534)
T ss_pred HHHHhcc
Confidence 9998854
No 29
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-68 Score=578.45 Aligned_cols=506 Identities=24% Similarity=0.344 Sum_probs=424.1
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.++|++.+. .+|+++|+++. .+++||+||++.+.++|..|.+.|+++||+|+++++|+++++++++||+++
T Consensus 6 ~i~~~l~~~~~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~ 78 (513)
T PRK07656 6 TLPELLARAAR-RFGDKEAYVFG------DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKA 78 (513)
T ss_pred cHHHHHHHHHH-HCCCCeEEEeC------CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 46677888777 79999999964 578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++++++.+.+..++++++++++++++... .........+ +.++.+++...... . .
T Consensus 79 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~----~--~ 139 (513)
T PRK07656 79 GAVVVPLNTRYTADEAAYILARGDAKALFVLGLFL---------GVDYSATTRL----PALEHVVICETEED----D--P 139 (513)
T ss_pred CeEEEecCcccCHHHHHHHHhhcCceEEEEchhhH---------HHHHHHHhcc----CCccEEEEEcCccc----c--c
Confidence 99999999999999999999999999999987532 1222222222 45555655443221 0 0
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.......|.++..............++++++|+|||||||.||+|.++|++++... ......+++++++++++.+|++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 218 (513)
T PRK07656 140 HTEKMKTFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNA-ADWAEYLGLTEGDRYLAANPFFH 218 (513)
T ss_pred CccccccHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHH-HHHHHhhCCCCCCeEEEccchHH
Confidence 01122345555443322223334678999999999999999999999999855444 44455678999999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
.+|+...++.++..|+++++... .++..+++.|+++++|++.++|+++..|.+.... ...+++++|.+++||++
T Consensus 219 ~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~l~~v~~~g~~ 292 (513)
T PRK07656 219 VFGYKAGVNAPLMRGATILPLPV----FDPDEVFRLIETERITVLPGPPTMYNSLLQHPDR--SAEDLSSLRLAVTGAAS 292 (513)
T ss_pred HHHHHHHHHHHHHcCceEEecCc----CCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCc--CCCCccceeeEEecCCC
Confidence 99988788999999999988643 3789999999999999999999999999987543 23467899999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC-CCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEec
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 452 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~ 452 (631)
+++++++++.+.++. .++++.||+||+|++...+.... ....++++|.|+++++++|+|+++++++.|+.|||++++
T Consensus 293 ~~~~~~~~~~~~~~~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~ 370 (513)
T PRK07656 293 MPVALLERFESELGV--DIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEVGELLVRG 370 (513)
T ss_pred CCHHHHHHHHHHcCC--CceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCceEEEEEc
Confidence 999999999999872 28999999999987665443322 112368899999999999999999999999999999999
Q ss_pred CCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEE
Q 006776 453 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 532 (631)
Q Consensus 453 ~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv 532 (631)
+.++.||++++..+...+. .+|||+|||+|+++++|.++++||.||+||++|.+++|.+||++|.++++|.+++|+
T Consensus 371 --~~~~~gy~~~~~~~~~~~~--~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 446 (513)
T PRK07656 371 --PNVMKGYYDDPEATAAAID--ADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVI 446 (513)
T ss_pred --chhhhhhcCCHHHHhhhhc--cCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEE
Confidence 9999999999877666553 378999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHH
Q 006776 533 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 601 (631)
Q Consensus 533 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~ 601 (631)
+.+++..++.++++|+.+++...+ .+++++++++.|+++++|..++++++||+|++||++|+.|++
T Consensus 447 ~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 447 GVPDERLGEVGKAYVVLKPGAELT---EEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred ecCCcccCceEEEEEEECCCCCCC---HHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 999888889999999987644444 567899999999999999999999999999999999999975
No 30
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.7e-68 Score=582.86 Aligned_cols=514 Identities=21% Similarity=0.330 Sum_probs=411.1
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
+.+.|++++. .+|+++|++.. .+.+||+||.+++.++|+.|.+ .|+++||+|+++++|++++++++|||+++
T Consensus 26 ~~~~l~~~a~-~~p~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~ 98 (562)
T PRK05677 26 IQAVLKQSCQ-RFADKPAFSNL------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRA 98 (562)
T ss_pred HHHHHHHHHH-hCCCCeeEEEC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 5567777777 79999999843 4689999999999999999987 69999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc---c--
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT---R-- 208 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~---~-- 208 (631)
|++++|++|.++.+++.+++++++++++|+++... ..+.+.... ..++.+++........ .
T Consensus 99 Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 164 (562)
T PRK05677 99 GLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMA---------HLAEKVLPK-----TGVKHVIVTEVADMLPPLKRLL 164 (562)
T ss_pred CeEEeecCCCCCHHHHHHHHhccCceEEEEecchh---------hhHHHhhhc-----cCcceeEEecccccccchhhhh
Confidence 99999999999999999999999999999876432 111111111 1233333221100000 0
Q ss_pred -----cc----C-cCCCCCccchhhhcccCCC-CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHH-h
Q 006776 209 -----EN----T-KWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY-A 276 (631)
Q Consensus 209 -----~~----~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~-~ 276 (631)
.. . .........+.+.+..... ........++++++|+|||||||.||||+++|++++.+....... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~ 244 (562)
T PRK05677 165 INAVVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG 244 (562)
T ss_pred cccchhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc
Confidence 00 0 0000011223333222111 111223467999999999999999999999999966544332221 1
Q ss_pred cCCCC-CcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCcc
Q 006776 277 FDYKP-SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY 355 (631)
Q Consensus 277 ~~~~~-~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~ 355 (631)
..+.+ .+++++.+|+.|..|+.+.++..+..|++.++.... .++..+++.|+++++|+++++|+++..+.+...
T Consensus 245 ~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-- 319 (562)
T PRK05677 245 SNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNP---RDLPAMVKELGKWKFSGFVGLNTLFVALCNNEA-- 319 (562)
T ss_pred cCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCc---ccHHHHHHHHHHcCceEEecHHHHHHHHHhCcc--
Confidence 23443 367888999999998877777888889887776542 378889999999999999999999999987542
Q ss_pred ccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCC
Q 006776 356 VTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE 435 (631)
Q Consensus 356 ~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~ 435 (631)
....+++++|.+++||+++++++++.+.+.++ +++++.||+||+++++...... ...++++|.|++++.++|+|+
T Consensus 320 ~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d~ 394 (562)
T PRK05677 320 FRKLDFSALKLTLSGGMALQLATAERWKEVTG---CAICEGYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVIDD 394 (562)
T ss_pred cccCChhhceEEEEcCccCCHHHHHHHHHHcC---CCeeccCCccccCcceeecCcc--CCCCCccCccCCCCEEEEECC
Confidence 22345679999999999999999999999886 7899999999998765543322 245688999999999999999
Q ss_pred CCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHH
Q 006776 436 KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAE 515 (631)
Q Consensus 436 ~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~e 515 (631)
++++++.|+.|||+++| |.++.|||++++.+...+.. +|||+|||+|++|++|++++.||++|+||++|++|+|.+
T Consensus 395 ~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~--~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~e 470 (562)
T PRK05677 395 DGNELPLGEVGELCVKG--PQVMKGYWQRPEATDEILDS--DGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNE 470 (562)
T ss_pred CCCCCCCCCCeEEEEec--CccchhhcCCchhhhhccCC--CCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHH
Confidence 99999999999999999 99999999999888776643 789999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhh
Q 006776 516 VESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 595 (631)
Q Consensus 516 IE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~ 595 (631)
||++|.+||+|.+++|++++++..++.++++|++.++...+ .+++++++++.|+++++|..++++++||+|++||++
T Consensus 471 iE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~ 547 (562)
T PRK05677 471 LEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLT---KEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKIL 547 (562)
T ss_pred HHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCCC---HHHHHHHHHHhhhhccCCcEEEEeccCCCCCccccc
Confidence 99999999999999999999988889999999887665444 568899999999999999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 006776 596 RRILRKIASRQ 606 (631)
Q Consensus 596 r~~l~~~~~~~ 606 (631)
|+.|++.+..+
T Consensus 548 r~~L~~~~~~~ 558 (562)
T PRK05677 548 RRELRDEELKK 558 (562)
T ss_pred HHHHHHHHHHh
Confidence 99999977654
No 31
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-67 Score=581.88 Aligned_cols=521 Identities=22% Similarity=0.296 Sum_probs=425.4
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.++|++++. .+|+++|+++.+ ..+.+||.||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 19 ~l~~~l~~~~~-~~p~~~a~~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~ 93 (558)
T PRK12583 19 TIGDAFDATVA-RFPDREALVVRH----QALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARI 93 (558)
T ss_pred cHHHHHHHHHH-HCCCCeEEEecC----CCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhh
Confidence 46789999888 799999998752 3578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhh---------hcCCCccEEEEEecCC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECA---------KSGISVDVCLTYENQS 204 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~vi~~~~~~ 204 (631)
|++++++++.++.+++.+++++++++++|+++..... .+...+......+. ...+.+..++......
T Consensus 94 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
T PRK12583 94 GAILVNINPAYRASELEYALGQSGVRWVICADAFKTS----DYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP 169 (558)
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCCcEEEEecccccc----chhHHHHHHhhhhccccccccccccCCcceEEEEecCCC
Confidence 9999999999999999999999999999998754321 11111122111110 0012333333332211
Q ss_pred ccccccCcCCCCCccchhhhcccCCC------CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC
Q 006776 205 AMTRENTKWQDGRDIWWQDVVPKYPT------KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 278 (631)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~ 278 (631)
. .....|++.....+. ........++++++++|||||||.||+|+++|++++.+ .......++
T Consensus 170 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~-~~~~~~~~~ 238 (558)
T PRK12583 170 P----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNN-GYFVAESLG 238 (558)
T ss_pred C----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHH-HHHHHHHhC
Confidence 0 011123332221110 11122345788999999999999999999999996544 344445678
Q ss_pred CCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccc
Q 006776 279 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 358 (631)
Q Consensus 279 ~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~ 358 (631)
+.++|++++..|++|..|....++.++..|+++++.... .++..+++.++++++|++.++|+++..++.... ...
T Consensus 239 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~--~~~ 313 (558)
T PRK12583 239 LTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEA---FDPLATLQAVEEERCTALYGVPTMFIAELDHPQ--RGN 313 (558)
T ss_pred CCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCC---CCHHHHHHHHHHcCCeEEeccHHHHHHHHcccc--ccC
Confidence 899999999999999999888889999999999876443 478899999999999999999999988886543 234
Q ss_pred cCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC-CCCCCCCcCCCcCCCceEEeCCCC
Q 006776 359 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPFFGVQPVIVDEKG 437 (631)
Q Consensus 359 ~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~g 437 (631)
.+++++|.+++||+++++++.+++.+.++ ...+++.||+||++++.+...... ...+++++|.|++++.++|+|+++
T Consensus 314 ~~~~~lr~i~~~G~~~~~~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~ 391 (558)
T PRK12583 314 FDLSSLRTGIMAGAPCPIEVMRRVMDEMH--MAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDG 391 (558)
T ss_pred CCchhheEEEecCCCCCHHHHHHHHHHcC--CcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCC
Confidence 56889999999999999999999999987 357999999999998665433211 234568899999999999999999
Q ss_pred cccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHH
Q 006776 438 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVE 517 (631)
Q Consensus 438 ~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE 517 (631)
++++.|+.|||+++| +.++.||+++++.+...+.. +|||+|||+|++++||++++.||.||+||++|.+|+|.+||
T Consensus 392 ~~~~~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~~~--~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE 467 (558)
T PRK12583 392 ATVPRGEIGELCTRG--YSVMKGYWNNPEATAESIDE--DGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIE 467 (558)
T ss_pred CCCCCCCeeEEEEEe--CccchhhcCChHHHHhhcCC--CCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHH
Confidence 999999999999999 89999999999877665533 78999999999999999999999999999999999999999
Q ss_pred HHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHH
Q 006776 518 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 597 (631)
Q Consensus 518 ~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~ 597 (631)
++|.+||+|.+++|++++++..++.++++|+..++...+ .++|+++++++|+++++|..++++++||+|++||++|+
T Consensus 468 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~ 544 (558)
T PRK12583 468 EFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAAS---EEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKF 544 (558)
T ss_pred HHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCCC---HHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHH
Confidence 999999999999999999988888999999987765443 56899999999999999999999999999999999999
Q ss_pred HHHHHHhcCcC
Q 006776 598 ILRKIASRQLD 608 (631)
Q Consensus 598 ~l~~~~~~~~~ 608 (631)
.|++++.++.+
T Consensus 545 ~L~~~~~~~~~ 555 (558)
T PRK12583 545 RMREISIEELA 555 (558)
T ss_pred HHHHHHHhhcC
Confidence 99999877643
No 32
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=8.6e-68 Score=578.91 Aligned_cols=506 Identities=24% Similarity=0.334 Sum_probs=413.0
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.+++++++. .+|+++|+++.++..+..+.+||+||++++.++|.+|.+.|+++||+|+++++|++++++++|||+++
T Consensus 23 ~~~~~~~~~~~-~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 23 TINDHFDAAVA-NCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred cHHHHHHHHHH-HCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 35577888887 79999999875432234578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|.++.+++.++++.++++++++++.... .............+ +..+.+++.+....
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 165 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRG----FDHAAMARELQSKL----PALRQVVVIDGDGD-------- 165 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEcccccc----ccHHHHHHHHhccC----CcceEEEEecCCCC--------
Confidence 999999999999999999999999999999765321 11112222222222 34455555432110
Q ss_pred CCCCccchhhhcccC-----CC---CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEE
Q 006776 214 QDGRDIWWQDVVPKY-----PT---KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 285 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~ 285 (631)
..|++.+... +. ........++++++|+|||||||.||+|+++|++++..... ....++++.+|++
T Consensus 166 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~-~~~~~~~~~~d~~ 239 (538)
T TIGR03208 166 -----DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHP-YAERLELGGGDVI 239 (538)
T ss_pred -----cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHH-HHhhcCCCCCCeE
Confidence 1122111100 00 01112346789999999999999999999999986554443 3446778889999
Q ss_pred EEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCcee
Q 006776 286 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 365 (631)
Q Consensus 286 ~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr 365 (631)
++.+|+.|..|..+.++.++..|+++++.+. +++..+++.+++++++++.++|+++..+...... ...+++++|
T Consensus 240 l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~--~~~~~~~l~ 313 (538)
T TIGR03208 240 LMASPMAHQTGFMYGLMMPLILNATAVLQDI----WNPARAAELIRETGVTFTMASTPFLTDLCRAVKE--SGAPVPSLF 313 (538)
T ss_pred EEeCCchhHHHHHHHHHHHHHcCCEEEecCc----cCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhc--cCCCCCcce
Confidence 9999999999887788999999999998753 4899999999999999999999999998865422 234678999
Q ss_pred EEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcc
Q 006776 366 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECS 445 (631)
Q Consensus 366 ~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~ 445 (631)
.+++||+++++++.+++.+.++ +++++.||+||++++..............++|+|+++++++|+|++|++++.|+.
T Consensus 314 ~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~ 390 (538)
T TIGR03208 314 TFLCAGAPIPGILVERAWELLG---ALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGET 390 (538)
T ss_pred EEEEcCCCCCHHHHHHHHHHcC---CeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCC
Confidence 9999999999999999999886 7899999999998765433222112234578999999999999999999999999
Q ss_pred eeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcc
Q 006776 446 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 525 (631)
Q Consensus 446 Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~ 525 (631)
|||+++| +.++.|||++++.+.. ..+|||+|||+|++|++|+++++||.||+||++|++|+|.+||++|.+||+
T Consensus 391 Gel~v~g--~~~~~gy~~~~~~~~~----~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~ 464 (538)
T TIGR03208 391 GRLLVRG--CSNFGGYLKRPHLNST----DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPA 464 (538)
T ss_pred cEEEEec--CcccccccCCcccccc----cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcc
Confidence 9999999 8999999999875432 247899999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHh-hcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 526 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 526 V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~-~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
|.+++|+++++...++.+.++|++.++...+ .+++.+++++ +++.+++|..+++++++|+|++||++|+.|+
T Consensus 465 v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 465 VAQVAIVAYPDERLGERACAVVVPKPGCTLD---FAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred eeeEEEEeccCCCCCceEEEEEEECCCCCCC---HHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 9999999999888889999999988765544 4578888885 7999999999999999999999999999986
No 33
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.1e-68 Score=581.35 Aligned_cols=515 Identities=24% Similarity=0.359 Sum_probs=420.0
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~-Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
++.++|.+++. .+|+++|+++. .+++||.||.+++.++|..|.+. |+++||+|+++++|++++++++|||++
T Consensus 11 tl~~~l~~~a~-~~~~~~a~~~~------~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 83 (546)
T PRK08314 11 SLFHNLEVSAR-RYPDKTAIVFY------GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILR 83 (546)
T ss_pred CHHHHHHHHHH-HcCCCcceeec------CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 35677777777 79999999975 46899999999999999999998 999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccc---
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE--- 209 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~--- 209 (631)
+|++++|++++++.+++.++++.++++++|+++.... .+......+ .++++++..........
T Consensus 84 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 149 (546)
T PRK08314 84 ANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAP---------KVAPAVGNL-----RLRHVIVAQYSDYLPAEPEI 149 (546)
T ss_pred cCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhh---------hHHHHhhcc-----CcceEEEecchhhccccccc
Confidence 9999999999999999999999999999999865421 111111111 23333322110000000
Q ss_pred cC-----------cCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC
Q 006776 210 NT-----------KWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 278 (631)
Q Consensus 210 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~ 278 (631)
.. .........|.+...... ........++++++|+|||||||.||+|+++|++++.+... ....++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~-~~~~~~ 227 (546)
T PRK08314 150 AVPAWLRAEPPLQALAPGGVVAWKEALAAGL-APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVG-SVLWSN 227 (546)
T ss_pred CcccccccccccccccccccccHHHHhcccC-CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHH-HHHhhC
Confidence 00 000112233444433211 12233456789999999999999999999999997665554 344577
Q ss_pred CCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccc
Q 006776 279 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 358 (631)
Q Consensus 279 ~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~ 358 (631)
+.++|++++.+|++|++|+...++.++..|+++++.+. .++..+++.++++++|++.++|++++.++.... ...
T Consensus 228 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~--~~~ 301 (546)
T PRK08314 228 STPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPR----WDREAAARLIERYRVTHWTNIPTMVVDFLASPG--LAE 301 (546)
T ss_pred CCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCC----CCHHHHHHHHHHhcCceecccHHHHHHHHhCCC--ccc
Confidence 89999999999999999987888899999999999864 378899999999999999999999999887532 234
Q ss_pred cCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCC-CC
Q 006776 359 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KG 437 (631)
Q Consensus 359 ~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~g 437 (631)
.+++++|.+++||+++++++++++.+.++ +++++.||+||++......... ....+++|.|++|++++|+|+ ++
T Consensus 302 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~ 376 (546)
T PRK08314 302 RDLSSLRYIGGGGAAMPEAVAERLKELTG---LDYVEGYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETL 376 (546)
T ss_pred cCchhhheeeeccccCCHHHHHHHHHHcC---CcEEecccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCC
Confidence 56789999999999999999999999887 7899999999998765543322 134578999999999999995 78
Q ss_pred cccCCCcceeEEEecCCCcccccccCCchhhhhhccc-cCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHH
Q 006776 438 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEV 516 (631)
Q Consensus 438 ~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~-~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eI 516 (631)
++++.|+.|||+++| |+++.||+++++.+...|.. ..++||+|||+|+++++|++++.||+||+||++|++|+|.||
T Consensus 377 ~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eI 454 (546)
T PRK08314 377 EELPPGEVGEIVVHG--PQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEV 454 (546)
T ss_pred cCCCCCCceEEEEEC--CchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHH
Confidence 999999999999999 89999999998877766543 223599999999999999999999999999999999999999
Q ss_pred HHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhH
Q 006776 517 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMR 596 (631)
Q Consensus 517 E~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r 596 (631)
|++|.++|+|.+++|++.++...++.++++|+.+++.... ...++++++|+++|+++++|..++++++||+|.+||++|
T Consensus 455 E~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~-~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r 533 (546)
T PRK08314 455 ENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARGK-TTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILW 533 (546)
T ss_pred HHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCCC-CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeH
Confidence 9999999999999999999988889999999988764321 114689999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 006776 597 RILRKIASR 605 (631)
Q Consensus 597 ~~l~~~~~~ 605 (631)
+.|++...+
T Consensus 534 ~~L~~~~~~ 542 (546)
T PRK08314 534 RQLQEQEKA 542 (546)
T ss_pred HHHHHHHhh
Confidence 999886654
No 34
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-67 Score=572.04 Aligned_cols=490 Identities=22% Similarity=0.306 Sum_probs=410.6
Q ss_pred hhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 56 YNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 56 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
.+.++++++ .+|+++|+++. .+.+||.||++++.++|++|++ .|+++||+|+++++|++++++++|||+++|
T Consensus 5 ~~~~~~~a~-~~p~~~a~~~~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G 77 (496)
T PRK06839 5 AYWIEKRAY-LHPDRIAIITE------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVE 77 (496)
T ss_pred HHHHHHHHH-HCCCCeEEEEC------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 456777887 79999999953 5899999999999999999975 799999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|+++.++.+++..+++.++++++++++... ..+.+.... .....++.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~------------ 131 (496)
T PRK06839 78 CIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQ---------NMALSMQKV-----SYVQRVISITS------------ 131 (496)
T ss_pred cEEEecCcccCHHHHHHHHHhcCceEEEEcHHHH---------HHHHHhhhc-----cCcceEEEecc------------
Confidence 9999999999999999999999999999876432 111111111 12223332221
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
+.+....... ......++++++|+|||||||.||+|+++|.+++.+.... ...+++.++|++++.+|++|.
T Consensus 132 ------~~~~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~d~~l~~~p~~~~ 202 (496)
T PRK06839 132 ------LKEIEDRKID--NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNN-TFAIDLTMHDRSIVLLPLFHI 202 (496)
T ss_pred ------hHhhhccCCC--CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHH-HHHcCCCCCCeEEEeeCCcch
Confidence 1111111111 1122456899999999999999999999999865443333 345688899999999999999
Q ss_pred cchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCC
Q 006776 295 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 374 (631)
Q Consensus 295 ~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l 374 (631)
+|....++.++..|+++++.+. .+++.+++.++++++|++.++|++++.+.+... ....+++++|.+++||+++
T Consensus 203 ~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gG~~~ 276 (496)
T PRK06839 203 GGIGLFAFPTLFAGGVIIVPRK----FEPTKALSMIEKHKVTVVMGVPTIHQALINCSK--FETTNLQSVRWFYNGGAPC 276 (496)
T ss_pred hhHHHHHHHHHhcCcEEEEccC----CCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcc--cccCCCcccceEEECCCCC
Confidence 9877767888999999988654 489999999999999999999999999998643 2345678999999999999
Q ss_pred CHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCC
Q 006776 375 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 454 (631)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~ 454 (631)
++++.+++.+. + +++.+.||+||++.+.+.........+.+++|.|+++++++|+|+++++++.|+.|||+|++
T Consensus 277 ~~~~~~~~~~~-g---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~Gel~v~~-- 350 (496)
T PRK06839 277 PEELMREFIDR-G---FLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEVGELLIRG-- 350 (496)
T ss_pred CHHHHHHHHHh-C---CeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCceEEEEEC--
Confidence 99999998875 4 78999999999997554333322335678999999999999999999999999999999999
Q ss_pred CcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEee
Q 006776 455 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 534 (631)
Q Consensus 455 p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~ 534 (631)
|.++.|||++++.+...+ .+|||+|||+++++++|++++.||.||+||.+|++|+|.+||++|.++|+|.+++|+++
T Consensus 351 ~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~ 427 (496)
T PRK06839 351 PNVMKEYWNRPDATEETI---QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGR 427 (496)
T ss_pred CCcchhhcCChHHHHHHH---cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEec
Confidence 999999999988766554 27999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 535 EHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 535 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
+++..++.++++|+.+++...+ .++|++++++.|+++++|..+++++++|+|.+||++|+.|+++..+
T Consensus 428 ~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 428 QHVKWGEIPIAFIVKKSSSVLI---EKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred cccccCceEEEEEEECCCCCCC---HHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 9988899999999998766554 5689999999999999999999999999999999999999987754
No 35
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.4e-68 Score=594.80 Aligned_cols=530 Identities=18% Similarity=0.243 Sum_probs=399.5
Q ss_pred chhHhhhhhhhhhccCCCCeeEEEEE---cCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHH
Q 006776 51 ITNICYNCLDRNIEAGLGDKVAIYWE---ANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAM 127 (631)
Q Consensus 51 ~~n~~~~~l~~~~~~~~~~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~ 127 (631)
.+.++.++|++++. .+|+++|+.+. +...+..+.+||+||.+++.++|++|.++|+++||+|+|+++|+++|++++
T Consensus 41 ~~~t~~~~l~~~~~-~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 119 (660)
T PLN02861 41 DIDSPWQFFSDAVK-KYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAM 119 (660)
T ss_pred CCCCHHHHHHHHHH-hCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 45567788988888 79999999763 111133568999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc
Q 006776 128 LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 207 (631)
Q Consensus 128 lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 207 (631)
|||+++|++++|+++.++.+++.++|++++++++|+++... ..+......+ .+.++.++.++......
T Consensus 120 lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~---------~~~~~~~~~~---~~~l~~ii~~~~~~~~~ 187 (660)
T PLN02861 120 EACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI---------SSILSCLPKC---SSNLKTIVSFGDVSSEQ 187 (660)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH---------HHHHHhhhhC---CCCCEEEEEECCCChhh
Confidence 99999999999999999999999999999999999865321 1122222221 12466666654321000
Q ss_pred cccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC-----CCCC
Q 006776 208 RENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-----YKPS 282 (631)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~-----~~~~ 282 (631)
.............|.++..............++|+++|+|||||||.||||++||++++.+.... ...++ +.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~-~~~~~~~~~~~~~~ 266 (660)
T PLN02861 188 KEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLST-DHLLKVTDRVATEE 266 (660)
T ss_pred hhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHH-HhccccccccCCCC
Confidence 00000000011335544432211112223468999999999999999999999999966554332 22222 4678
Q ss_pred cEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCC---------
Q 006776 283 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN--------- 353 (631)
Q Consensus 283 d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--------- 353 (631)
|++++++|++|+++.... +.+++.|++++++. .++..+++.|++++||+++++|++++.|.+...
T Consensus 267 d~~l~~lPl~H~~~~~~~-~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~ 340 (660)
T PLN02861 267 DSYFSYLPLAHVYDQVIE-TYCISKGASIGFWQ-----GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGML 340 (660)
T ss_pred CEEEEECcHHHHHHHHHH-HHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHH
Confidence 999999999999987654 45799999998874 267899999999999999999999998864100
Q ss_pred --------------------------cccccc-------CC-CceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccccc
Q 006776 354 --------------------------EYVTRY-------SR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQ 399 (631)
Q Consensus 354 --------------------------~~~~~~-------~l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~ 399 (631)
...... .+ +++|.+++||+++++++.+ +.+.++ ..++++.||+
T Consensus 341 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~--~~~l~~~YG~ 417 (660)
T PLN02861 341 RKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTS--CSVLSQGYGL 417 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHc--CCCeeEecch
Confidence 000000 12 5899999999999999754 666666 2579999999
Q ss_pred ccccceecccCCCCCCCCCCCcCCCcCCCceEEeC--CCC-cccCCCcceeEEEecCCCcccccccCCchhhhhhccccC
Q 006776 400 TETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD--EKG-VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 476 (631)
Q Consensus 400 tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d--~~g-~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~ 476 (631)
||+++.++...... ..+.+++|+|+|+++++|+| ++| ..++.++.|||+++| |+++.|||++++.+...|.
T Consensus 418 TE~~~~~~~~~~~~-~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrG--p~v~~GY~~~pe~T~~~f~--- 491 (660)
T PLN02861 418 TESCGGCFTSIANV-FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRG--NTLFSGYHKRQDLTEEVLI--- 491 (660)
T ss_pred hhhhhceeeccccc-CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcC--CcccccccCCHHHHHhhhh---
Confidence 99986554433221 23578999999999999997 344 233455679999999 9999999999998888773
Q ss_pred CCeEecCceEEEccCCeEEEEeecCCeEec-CceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCC---
Q 006776 477 PGYYFTGDGCSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG--- 552 (631)
Q Consensus 477 ~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~-~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~--- 552 (631)
+|||+|||+|++|+||+++|+||+||+||+ +|++|+|.+||++|.+||.|.+++|+|.+ .++.++|+|++...
T Consensus 492 dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~~~~l~ 568 (660)
T PLN02861 492 DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPDRQALE 568 (660)
T ss_pred ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcCHHHHH
Confidence 799999999999999999999999999997 69999999999999999999999999975 34678999987532
Q ss_pred -------CCCc-H------HHHHHHHHHHHh-----hcCCCccCceEEECC-CC-----CCCCCchhhHHHHHHHHhcCc
Q 006776 553 -------VPYS-E------ELRKSLVLAVRK-----QIGAFAAPDKIHWAP-GL-----PKTRSGKIMRRILRKIASRQL 607 (631)
Q Consensus 553 -------~~~~-~------~~~~~i~~~~~~-----~l~~~~~p~~i~~v~-~l-----P~t~sGKi~r~~l~~~~~~~~ 607 (631)
...+ . .....+.+.+.+ .+..+..++.+.+.+ .+ .+|+++|+.|+.+.+.|.+++
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I 648 (660)
T PLN02861 569 DWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCI 648 (660)
T ss_pred HHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHH
Confidence 0011 1 122334444433 488899999888855 56 799999999999999999888
Q ss_pred CCCCC
Q 006776 608 DELGD 612 (631)
Q Consensus 608 ~~~~~ 612 (631)
+++++
T Consensus 649 ~~lY~ 653 (660)
T PLN02861 649 DQLYS 653 (660)
T ss_pred HHHHH
Confidence 76653
No 36
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-67 Score=573.86 Aligned_cols=513 Identities=24% Similarity=0.306 Sum_probs=426.1
Q ss_pred chhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHH
Q 006776 51 ITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 130 (631)
Q Consensus 51 ~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~ 130 (631)
..+++.++|.+.+. .+|+++|+++. .+.+||.||.+.+.++|..|.+.|+++||+|+++++|+++++++++||
T Consensus 9 ~~~~l~~~l~~~a~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~ 81 (523)
T PRK08316 9 RRQTIGDILRRSAR-RYPDKTALVFG------DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLAC 81 (523)
T ss_pred cCCCHHHHHHHHHH-HCCCCeEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 34668889988887 79999999865 478999999999999999999999999999999999999999999999
Q ss_pred HHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccccc
Q 006776 131 ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN 210 (631)
Q Consensus 131 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 210 (631)
+++|++++|+++.++.+++.++++.++++++++++... ..+....+.. . ...+.......
T Consensus 82 ~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~-~~~~~~~~~~~------ 141 (523)
T PRK08316 82 ARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALA---------PTAEAALALL----P-VDTLILSLVLG------ 141 (523)
T ss_pred HhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchH---------HHHHHHhhhc----C-ccceeeeeccc------
Confidence 99999999999999999999999999999999986532 2222222221 1 11111111000
Q ss_pred CcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecc
Q 006776 211 TKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTAD 290 (631)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 290 (631)
..........+.+.....+..........+++++|+|||||||.||+|.++|++++.+... ....+++.+++++++.+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~p 220 (523)
T PRK08316 142 GREAPGGWLDFADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVS-CIVAGDMSADDIPLHALP 220 (523)
T ss_pred ccccccchhhHHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHH-HHHHhCCCCCceEEEccC
Confidence 0000111233333333322222333467889999999999999999999999996555443 344678999999999999
Q ss_pred cceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEc
Q 006776 291 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 370 (631)
Q Consensus 291 ~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~ 370 (631)
++|..|+...+..++..|+++++.+. ++++.+++.++++++|++.++|+++..|.+... ....+++++|.+++|
T Consensus 221 ~~h~~g~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~~g 294 (523)
T PRK08316 221 LYHCAQLDVFLGPYLYVGATNVILDA----PDPELILRTIEAERITSFFAPPTVWISLLRHPD--FDTRDLSSLRKGYYG 294 (523)
T ss_pred CchhhhHHHHHHHHHhcCceEEEecC----CCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcc--cccCCcccceEEEEc
Confidence 99999876666777889999999865 378999999999999999999999999987643 234577899999999
Q ss_pred cCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEE
Q 006776 371 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCI 450 (631)
Q Consensus 371 Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v 450 (631)
|+.++.++.+.+.+.++ ++++++.||+||++.+.....+.......+++|+|+++++++|+|++|++++.|+.|||++
T Consensus 295 g~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gei~v 372 (523)
T PRK08316 295 ASIMPVEVLKELRERLP--GLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEVGEIVH 372 (523)
T ss_pred CCcCCHHHHHHHHHHcC--CCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCcceEEE
Confidence 99999999999999886 4789999999999876654433323345688999999999999999999999999999999
Q ss_pred ecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEE
Q 006776 451 KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAA 530 (631)
Q Consensus 451 ~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~ 530 (631)
+| +.++.||+++++.+...+. +|||+|||+|++++||+++++||+||+||++|++|+|.+||+.|.++++|.+++
T Consensus 373 ~~--~~~~~~y~~~~~~~~~~~~---~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~ 447 (523)
T PRK08316 373 RS--PQLMLGYWDDPEKTAEAFR---GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVA 447 (523)
T ss_pred EC--CchhhhhcCCHHHHHHHhh---CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEe
Confidence 99 9999999999887766652 689999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCc
Q 006776 531 VVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 607 (631)
Q Consensus 531 vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~ 607 (631)
|++++++..++.++++++..++...+ .+++.++++++++++++|..+++++++|+|++||++|+.|+++|.+.+
T Consensus 448 v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~ 521 (523)
T PRK08316 448 VIGLPDPKWIEAVTAVVVPKAGATVT---EDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAF 521 (523)
T ss_pred EecccCcccCCeEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhc
Confidence 99999998889999999988765443 567889999999999999999999999999999999999999998754
No 37
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-67 Score=579.66 Aligned_cols=513 Identities=23% Similarity=0.312 Sum_probs=416.8
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.++++++++ .+|+++|+++. .+.+||.||.+.++++|+.|.++|+++||+|+++++|++++++++|||+++|
T Consensus 34 l~~~~~~~~~-~~p~~~a~~~~------~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G 106 (573)
T PRK05605 34 LVDLYDNAVA-RFGDRPALDFF------GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLG 106 (573)
T ss_pred HHHHHHHHHH-HCCCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 5577788887 79999999974 3579999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc--c----
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT--R---- 208 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~--~---- 208 (631)
++++|++|.++.+++.+++++++++++|+++... ..+.+.... ..++.++.++...... .
T Consensus 107 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~ 172 (573)
T PRK05605 107 AVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVA---------PTVERLRRT-----TPLETIVSVNMIAAMPLLQRLAL 172 (573)
T ss_pred cEEeecCcCCCHHHHHHHHhccCCcEEEechhhH---------HHHHhhhhc-----cccceeEeeeccccccccccccc
Confidence 9999999999999999999999999999976532 111111111 1223333322110000 0
Q ss_pred -----------ccCcCCCCCccchhhhcccCCCC----CCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHH
Q 006776 209 -----------ENTKWQDGRDIWWQDVVPKYPTK----CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF 273 (631)
Q Consensus 209 -----------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~ 273 (631)
............|.++....... ........+++++|+|||||||.||+|+++|++++.+.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~ 252 (573)
T PRK05605 173 RLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGK 252 (573)
T ss_pred ccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHH
Confidence 00000011223455443321111 122235678999999999999999999999999765554333
Q ss_pred HHhcCC-CCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcC
Q 006776 274 KYAFDY-KPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDG 352 (631)
Q Consensus 274 ~~~~~~-~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~ 352 (631)
....++ ..++++++.+|++|..|+...++.++..|+++++.+. ++++.+++.|+++++|++.++|++++.|.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~ 328 (573)
T PRK05605 253 AWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPA----PDIDLILDAMKKHPPTWLPGVPPLYEKIAEAA 328 (573)
T ss_pred hhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCC----CCHHHHHHHHHHhCCEEEEchHHHHHHHHhCc
Confidence 322333 3468999999999999887777788999999999764 48899999999999999999999999999865
Q ss_pred CccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEE
Q 006776 353 NEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVI 432 (631)
Q Consensus 353 ~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i 432 (631)
.. ...+++++|.+++||+++++++.+.+.+.++ .++++.||+||+++++...... ....++++|.|++++.++|
T Consensus 329 ~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~---~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i 402 (573)
T PRK05605 329 EE--RGVDLSGVRNAFSGAMALPVSTVELWEKLTG---GLLVEGYGLTETSPIIVGNPMS-DDRRPGYVGVPFPDTEVRI 402 (573)
T ss_pred cc--cCCCchhccEEEECCCcCCHHHHHHHHHHhC---CCeecccccchhchhhhcCCcc-cCCcCCccccCCCCCEEEE
Confidence 32 3456789999999999999999999998886 6899999999999766544322 2245688999999999999
Q ss_pred eCCC--CcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCcee
Q 006776 433 VDEK--GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHR 510 (631)
Q Consensus 433 ~d~~--g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~ 510 (631)
+|++ +.+++.|+.|||++++ +.++.||+++++.+...+. +|||+|||+|+++++|++++.||.||+||++|++
T Consensus 403 ~d~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~---~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~ 477 (573)
T PRK05605 403 VDPEDPDETMPDGEEGELLVRG--PQVFKGYWNRPEETAKSFL---DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFN 477 (573)
T ss_pred EcCCCCCccCCCCCeeEEEEec--CchhhhhcCChhHhhhccc---CCCcccCCEEEEcCCCcEEEEeccccceeeCCEE
Confidence 9986 5889999999999999 8999999999887776654 5799999999999999999999999999999999
Q ss_pred echHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCC
Q 006776 511 IGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTR 590 (631)
Q Consensus 511 i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~ 590 (631)
|+|.+||++|.+|+.|.+++|++.+++..++.++++|++.++...+ .++|+++++++|+.+++|..|+++++||+|.
T Consensus 478 v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~ 554 (573)
T PRK05605 478 VYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALD---PEGLRAYCREHLTRYKVPRRFYHVDELPRDQ 554 (573)
T ss_pred ECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCCC---HHHHHHHHHHhCccccCCcEEEEeccCCCCC
Confidence 9999999999999999999999999988889999999988765544 5789999999999999999999999999999
Q ss_pred CchhhHHHHHHHHhcC
Q 006776 591 SGKIMRRILRKIASRQ 606 (631)
Q Consensus 591 sGKi~r~~l~~~~~~~ 606 (631)
+||++|+.|++++.++
T Consensus 555 ~GKi~r~~L~~~~~~~ 570 (573)
T PRK05605 555 LGKVRRREVREELLEK 570 (573)
T ss_pred cccccHHHHHHHHHHH
Confidence 9999999999998764
No 38
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-67 Score=577.30 Aligned_cols=506 Identities=21% Similarity=0.279 Sum_probs=399.2
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+.|.+++. .+|+++|+++.+ ..+.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 16 ~~~~l~~~a~-~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G 90 (540)
T PRK05857 16 VLDRVFEQAR-QQPEAIALRRCD----GTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLG 90 (540)
T ss_pred hHHHHHHHHh-hCCCcEEEeecC----CCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 4456666676 699999998642 24679999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|++++++.+++.++++.++++++|+++....... .+.+. + ..+. ++.++.... .
T Consensus 91 ~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~------~~~~~---~----~~~~-~~~~~~~~~-----~--- 148 (540)
T PRK05857 91 AIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASS------AVPEA---L----HSIP-VIAVDIAAV-----T--- 148 (540)
T ss_pred eEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccc------ccccc---c----cccc-eeEeecccc-----c---
Confidence 99999999999999999999999999999876432110 00000 0 1111 122221100 0
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHH---HHhcCCCCCcEEEEeccc
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF---KYAFDYKPSDVYWCTADC 291 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~---~~~~~~~~~d~~~~~~~~ 291 (631)
.. +.+..... ..........+++++++|||||||.||||+++|++++.+..... ...++...+++.+..+|+
T Consensus 149 ---~~-~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 223 (540)
T PRK05857 149 ---RE-SEHSLDAA-SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPA 223 (540)
T ss_pred ---cc-cccccccc-ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCc
Confidence 00 00000000 00111234678999999999999999999999999654432111 112356678899999999
Q ss_pred ceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEcc
Q 006776 292 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 371 (631)
Q Consensus 292 ~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~G 371 (631)
+|.+++. ..+.+++.|+++++.+ .++..+++.|+++++|+++++|++++.|.+.... ...+++++|.+++||
T Consensus 224 ~h~~~l~-~~~~~l~~G~~~v~~~-----~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~--~~~~~~~lr~~~~gG 295 (540)
T PRK05857 224 THIGGLW-WILTCLMHGGLCVTGG-----ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKS--ANATVPSLRLVGYGG 295 (540)
T ss_pred cccchHH-HHHHHhhcceeEEecC-----CChhHHHHHHHhcCcceEEeChHHHHHHHhcccc--CCCcCccceEEEEcC
Confidence 9999875 5678899999887632 2678899999999999999999999999876432 345788999999999
Q ss_pred CCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC---CCCCCCCcCCCcCCCceEEeCCCCcc-c-----CC
Q 006776 372 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---WPQKPGSATFPFFGVQPVIVDEKGVE-I-----EG 442 (631)
Q Consensus 372 e~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~---~~~~~~~~G~p~~~~~~~i~d~~g~~-~-----~~ 442 (631)
++++....+++ +.++ +++++.||+||++...+...... ....++++|+|++|++++|+|+++.. + +.
T Consensus 296 ~~~~~~~~~~~-~~~g---~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~ 371 (540)
T PRK05857 296 SRAIAADVRFI-EATG---VRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPS 371 (540)
T ss_pred ccCCchhHHHH-HHhC---CeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCC
Confidence 99998887644 4665 78999999999986443222111 12356899999999999999987763 2 34
Q ss_pred CcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhc
Q 006776 443 ECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVS 522 (631)
Q Consensus 443 g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~ 522 (631)
|+.|||+++| |+++.|||++++.+...+. +|||+|||+|++|++|++++.||.||+||++|++|+|.|||++|..
T Consensus 372 ~~~Gel~v~g--~~~~~GY~~~~~~t~~~~~---~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 446 (540)
T PRK05857 372 ASFGTLWIKS--PANMLGYWNNPERTAEVLI---DGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEG 446 (540)
T ss_pred CCcceEEEeC--cchhhhhhCCccchhhhcC---CCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHh
Confidence 6889999999 8999999999988777663 7899999999999999999999999999999999999999999999
Q ss_pred CcccceEEEEeeecCCCCeeEEEEEEeCCCCCC--cHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 523 HPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY--SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 523 ~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
||+|.+++|+++++...++.++++|+..+..+. .+++.+.+.+.+++.++++++|..++++++||+|++||++|+.|+
T Consensus 447 ~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~ 526 (540)
T PRK05857 447 VSGVREAACYEIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLA 526 (540)
T ss_pred CCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHH
Confidence 999999999999998778888888887654322 234567777888889999999999999999999999999999999
Q ss_pred HHHhcCcCC
Q 006776 601 KIASRQLDE 609 (631)
Q Consensus 601 ~~~~~~~~~ 609 (631)
++++++..+
T Consensus 527 ~~~~~~~~~ 535 (540)
T PRK05857 527 AAATADKAR 535 (540)
T ss_pred Hhhhhccce
Confidence 999986544
No 39
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4.7e-67 Score=569.44 Aligned_cols=507 Identities=28% Similarity=0.406 Sum_probs=423.6
Q ss_pred chhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHH
Q 006776 51 ITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 130 (631)
Q Consensus 51 ~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~ 130 (631)
.+|+++++++++....+|+++|++.. ...+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~p~~~a~~~~------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~ 75 (508)
T TIGR02262 2 KYNAAEDLLDRNVVEGRGGKTAFIDD------ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGA 75 (508)
T ss_pred cchHHHHHHHHHHhcccCCceEEEeC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 57999999999843369999999842 578999999999999999999999999999999999999999999999
Q ss_pred HHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccccc
Q 006776 131 ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN 210 (631)
Q Consensus 131 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 210 (631)
+++|++++|+++.++.+++.++++.++++++++++... ..+.+....+ +.+++++......
T Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~------ 136 (508)
T TIGR02262 76 IRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL---------PVIKAALGKS----PHLEHRVVVGRPE------ 136 (508)
T ss_pred HHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH---------HHHHHHHhcC----CCccEEEEeCCCC------
Confidence 99999999999999999999999999999999886532 2333333333 5555555443211
Q ss_pred CcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecc
Q 006776 211 TKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTAD 290 (631)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 290 (631)
.....+.+...............++++++|+|||||||.||+|+++|+++...........++++++|+++..+|
T Consensus 137 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 211 (508)
T TIGR02262 137 -----AGEVQLAELLATESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAK 211 (508)
T ss_pred -----cccccHHHHhhcCCCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCc
Confidence 011223333222222222233557899999999999999999999999976555443445678999999999999
Q ss_pred cceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEc
Q 006776 291 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 370 (631)
Q Consensus 291 ~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~ 370 (631)
++|..+....++.++..|+++++.++. +++..+++.|+++++|++.++|+++..++.... .......++|.++++
T Consensus 212 ~~~~~~~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~--~~~~~~~~l~~~~~~ 286 (508)
T TIGR02262 212 LFFAYGLGNALTFPMSVGATTVLMGER---PTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPN--LPAEDQVRLRLCTSA 286 (508)
T ss_pred hHHHHHHHHHHHHHHHcCceEEEeCCC---CCHHHHHHHHHHHCCcEEecchHHHHHHhcCcc--ccccccccceeEEEc
Confidence 999988767778889999999998653 478999999999999999999999988876532 223346789999999
Q ss_pred cCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEE
Q 006776 371 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCI 450 (631)
Q Consensus 371 Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v 450 (631)
|+++++++++.+.+.++ +++++.||+||++.+....... ..+.+++|.|++|+.++++|+++.+++.|+.|||++
T Consensus 287 G~~l~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~Gel~i 361 (508)
T TIGR02262 287 GEALPAEVGQRWQARFG---VDIVDGIGSTEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPGELLI 361 (508)
T ss_pred CCCCCHHHHHHHHHHhC---CchhhCccccccCceeecCCcc--CCCCCCcCCCCCCcEEEEECCCCCCCCCCCeeEEEE
Confidence 99999999999999987 7899999999999765543322 235678999999999999999999999999999999
Q ss_pred ecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEE
Q 006776 451 KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAA 530 (631)
Q Consensus 451 ~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~ 530 (631)
++ +.++.||+++++.+...+. +|||+|||+++++++|.+++.||+||+|+++|.+|+|.+||+.|.++++|.+++
T Consensus 362 ~~--~~~~~gY~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~ 436 (508)
T TIGR02262 362 SG--PSSATMYWNNRAKTRDTFQ---GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAA 436 (508)
T ss_pred ec--CccccccCCCHHHhHhhhh---cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEE
Confidence 99 8999999999887766553 689999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHH
Q 006776 531 VVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKI 602 (631)
Q Consensus 531 vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~ 602 (631)
+++.++...++.+.+++++.++....+.+.++|+++++++|+++++|..++++++||+|++||++|+.|+++
T Consensus 437 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 437 VVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred EEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 999988777788999998877654444457889999999999999999999999999999999999998753
No 40
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=5.7e-67 Score=573.84 Aligned_cols=512 Identities=23% Similarity=0.353 Sum_probs=418.9
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+++++++. .+|+++|++.. +.+.+||+||++++.++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 25 l~~~~~~~~~-~~pd~~a~~~~-----~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G 98 (547)
T PRK06087 25 LADYWQQTAR-AMPDKIAVVDN-----HGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVG 98 (547)
T ss_pred HHHHHHHHHH-HCCCceEEEcC-----CCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 5577888887 79999999853 23689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|+++.++.+++..+++.++++++++++..... ...+.+......+ +.+++++.++....
T Consensus 99 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~--------- 161 (547)
T PRK06087 99 AVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQT----RPVDLILPLQNQL----PQLQQIVGVDKLAP--------- 161 (547)
T ss_pred cEEeccchhcCHHHHHHHHHhcCCeEEEEecccccc----cHHHHHHHHHhhC----CCCcEEEEeCCcCC---------
Confidence 999999999999999999999999999997643211 2223333333333 45556665543211
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
......+.++....+..........+++++|+|||||||.||+|+++|++++.... .....+++.+++++++.+|++|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~-~~~~~~~~~~~d~~l~~~pl~h~ 240 (547)
T PRK06087 162 ATSSLSLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASER-AYCARLNLTWQDVFMMPAPLGHA 240 (547)
T ss_pred CcCccCHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHH-HHHHhcCCCCCCeEEEecchHHH
Confidence 01122334433332221122235678999999999999999999999999655443 34456788999999999999999
Q ss_pred cchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCC
Q 006776 295 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 374 (631)
Q Consensus 295 ~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l 374 (631)
+|+...++.+++.|+++++.+. +++..+++.+++++++++..+|+.+..+++.... ...+++++|.+++||+++
T Consensus 241 ~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~--~~~~~~~lr~i~~gG~~~ 314 (547)
T PRK06087 241 TGFLHGVTAPFLIGARSVLLDI----FTPDACLALLEQQRCTCMLGATPFIYDLLNLLEK--QPADLSALRFFLCGGTTI 314 (547)
T ss_pred HHHHHHHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCCEEeccHHHHHHHHhcccc--CCCCCCCeEEEEEcCCCC
Confidence 9987788899999999999765 4889999999999999999888777777765432 234678999999999999
Q ss_pred CHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCC
Q 006776 375 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 454 (631)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~ 454 (631)
++++.+.+.+. + +++++.||+||+++..............+++|.|++++.++++|+++.+++.|+.|||+++|
T Consensus 315 ~~~~~~~~~~~-~---~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g-- 388 (547)
T PRK06087 315 PKKVARECQQR-G---IKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCEGEEASRG-- 388 (547)
T ss_pred CHHHHHHHHHc-C---CcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCcceEEEec--
Confidence 99999887764 4 78999999999987655332221123456789999999999999999999999999999999
Q ss_pred CcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEee
Q 006776 455 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 534 (631)
Q Consensus 455 p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~ 534 (631)
|.++.|||++++.+...+.. +|||+|||+++++++|+++++||.||+|+.+|++|+|.+||++|.++|+|.+++|++.
T Consensus 389 ~~~~~gy~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~ 466 (547)
T PRK06087 389 PNVFMGYLDEPELTARALDE--EGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAM 466 (547)
T ss_pred ccccccccCCHHHHHHHhCC--CCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEec
Confidence 99999999999877766543 6899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeeEEEEEEeCCC-CCCcHHHHHHHHHHHH-hhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCc
Q 006776 535 EHEVKGQGIYAFVTLVEG-VPYSEELRKSLVLAVR-KQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 607 (631)
Q Consensus 535 ~~~~~~~~~~~~v~~~~~-~~~~~~~~~~i~~~~~-~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~ 607 (631)
+++..++.++++|+..+. ...+ .+++.++++ +.++++++|..|.++++||+|.+||++|+.|++.+.++.
T Consensus 467 ~~~~~g~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~ 538 (547)
T PRK06087 467 PDERLGERSCAYVVLKAPHHSLT---LEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRL 538 (547)
T ss_pred CCCCcCceEEEEEEECCCCCCCC---HHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHh
Confidence 988889999999998763 2222 456777765 579999999999999999999999999999999988764
No 41
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-67 Score=566.87 Aligned_cols=493 Identities=22% Similarity=0.311 Sum_probs=411.4
Q ss_pred hhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCC
Q 006776 56 YNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGA 135 (631)
Q Consensus 56 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~ 135 (631)
.+++++++. .+|+++|+++. .+.+||.||.+++.++|.+|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 5 ~~~~~~~~~-~~~~~~a~~~~------~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~ 77 (497)
T PRK06145 5 SASIAFHAR-RTPDRAALVYR------DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGA 77 (497)
T ss_pred HHHHHHHHH-HCCCceEEEEC------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 467888887 79999999864 46899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCC
Q 006776 136 VHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQD 215 (631)
Q Consensus 136 v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 215 (631)
+++|+++.++.+++.++++.++++++++++..... . .. . ...+.++....
T Consensus 78 ~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-------------~-~~-----~-~~~~~~~~~~~---------- 127 (497)
T PRK06145 78 VFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAI-------------V-AL-----E-TPKIVIDAAAQ---------- 127 (497)
T ss_pred EEEecccccCHHHHHHHHHhcCCcEEEEccchhhh-------------h-hc-----c-cceEEecCccc----------
Confidence 99999999999999999999999999987653210 0 00 0 11122211100
Q ss_pred CCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceec
Q 006776 216 GRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWIT 295 (631)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 295 (631)
..+..+..............++++++++|||||||.||+|+++|+++..... .....+++..+++++...|++|..
T Consensus 128 ---~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~ 203 (497)
T PRK06145 128 ---ADSRRLAQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSI-DHVIALGLTASERLLVVGPLYHVG 203 (497)
T ss_pred ---chhHHHhccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHH-HHHHhhCCCCCcEEEEecCchhHh
Confidence 0000000000000111234678999999999999999999999999654433 334456889999999999999998
Q ss_pred chhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCC
Q 006776 296 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPIN 375 (631)
Q Consensus 296 g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~ 375 (631)
++....+.++..|+++++.+. +++..+++.++++++|.+.++|++++.++..... ...+++++|.+++||++++
T Consensus 204 ~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~--~~~~~~~l~~~~~gG~~~~ 277 (497)
T PRK06145 204 AFDLPGIAVLWVGGTLRIHRE----FDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDR--DRFDLDSLAWCIGGGEKTP 277 (497)
T ss_pred HHHHHHHHHHhccCEEEECCc----CCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCc--cccccccceEEEecCCCCC
Confidence 876666778999999988754 4899999999999999999999999999876542 3456789999999999999
Q ss_pred HhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCC
Q 006776 376 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP 455 (631)
Q Consensus 376 ~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p 455 (631)
+++++++.+.++ +.++++.||+||+++..+....+......+++|+|+++++++++|+++++++.|+.|||+++| +
T Consensus 278 ~~~~~~~~~~~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g--~ 353 (497)
T PRK06145 278 ESRIRDFTRVFT--RARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMKGEICMRG--P 353 (497)
T ss_pred HHHHHHHHHHcC--CCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCceEEEEEC--c
Confidence 999999999987 478999999999997554332222233567899999999999999999999999999999999 9
Q ss_pred cccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeee
Q 006776 456 GAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVE 535 (631)
Q Consensus 456 ~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~ 535 (631)
+++.|||++++.+...+. +|||+|||++++++||+++++||+||+||++|++++|.+||++|.++|+|.+++|++.+
T Consensus 354 ~~~~Gy~~~~~~~~~~~~---~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~ 430 (497)
T PRK06145 354 KVTKGYWKDPEKTAEAFY---GDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVH 430 (497)
T ss_pred chhhhhcCChHHHHHHHh---CCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecC
Confidence 999999999988877663 68999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 536 HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 536 ~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
++..++.+++++++.+....+ .++|+++++++|+++++|..++++++||+|++||++|+.|++++++
T Consensus 431 ~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~~ 497 (497)
T PRK06145 431 DDRWGERITAVVVLNPGATLT---LEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELNG 497 (497)
T ss_pred CCccCceEEEEEEECCCCCCC---HHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhcC
Confidence 988888999999987655444 5689999999999999999999999999999999999999997753
No 42
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8e-67 Score=570.85 Aligned_cols=512 Identities=21% Similarity=0.260 Sum_probs=413.8
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.++|+.++. .+|++.++.+.. + +..+.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 11 ~~~~~l~~~~~-~~~~~~~~~~~~-~-~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 11 LISSLIAHAAR-HAGDTEIVSRRV-E-GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CHHHHHHHHHh-hCCCceEEEeec-c-CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 56788888887 678887776531 1 23468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|+++.+++..+++.++++++++++... +.+++....+ +.++.++.+..... .+.
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~ 149 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFL---------PLVDALAPQC----PNVKGWVAMTDAAH-----LPA 149 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhH---------HHHHHHHhhC----CCceEEEEEccCCc-----ccc
Confidence 99999999999999999999999999999876532 2233333332 44555554433221 000
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHH-HHHHhcCCCCCcEEEEecccc
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT-TFKYAFDYKPSDVYWCTADCG 292 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~-~~~~~~~~~~~d~~~~~~~~~ 292 (631)
.......|+++..............++++++++|||||||.||+|+++|++++.+... .....+++.++|+++..+|++
T Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 229 (539)
T PRK07008 150 GSTPLLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMF 229 (539)
T ss_pred CCcccccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchH
Confidence 0111334555543322222233456789999999999999999999999996543322 222356788899999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|..++ ..+++++..|+++++.... +++..+++.++++++|++.++|+++..+++.... ...+++++|.++++|+
T Consensus 230 h~~~~-~~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~~~G~ 303 (539)
T PRK07008 230 HVNAW-GLPYSAPLTGAKLVLPGPD---LDGKSLYELIEAERVTFSAGVPTVWLGLLNHMRE--AGLRFSTLRRTVIGGS 303 (539)
T ss_pred HhhhH-HHHHHHHhcCceEEEecCC---cCHHHHHHHHHHcCCEEEEechHHHHHHHhcccc--cCCCcccceEEEEcCC
Confidence 88765 3457788999999987542 4889999999999999999999999999876532 2456789999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC---------CCCCCCCcCCCcCCCceEEeCCCCcccCCC
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---------WPQKPGSATFPFFGVQPVIVDEKGVEIEGE 443 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~---------~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g 443 (631)
++++++++++.+.++ +++++.||+||++...+...... ......++|+|+||++++|+|+++++++.+
T Consensus 304 ~l~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~ 380 (539)
T PRK07008 304 ACPPAMIRTFEDEYG---VEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWD 380 (539)
T ss_pred CCCHHHHHHHHHHhC---CceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCC
Confidence 999999999999987 78999999999986544322110 001246789999999999999999888743
Q ss_pred --cceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHh
Q 006776 444 --CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALV 521 (631)
Q Consensus 444 --~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~ 521 (631)
+.|||+++| |.++.|||++++. .+ . +|||+|||++++|+||++++.||+||+||.+|.+|+|.+||++|.
T Consensus 381 ~~~~Gei~v~g--~~~~~gy~~~~~~---~~-~--~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 452 (539)
T PRK07008 381 GKAFGDLQVRG--PWVIDRYFRGDAS---PL-V--DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAV 452 (539)
T ss_pred CCcceEEEEeC--CccchhhcCChhh---hh-c--CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHH
Confidence 579999999 8999999998732 22 1 689999999999999999999999999999999999999999999
Q ss_pred cCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHH
Q 006776 522 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 601 (631)
Q Consensus 522 ~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~ 601 (631)
+||.|.+++|++++++..++.++++|+..++...+ .++++++++++++++++|+.|+++++||+|.+||++|+.|++
T Consensus 453 ~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~ 529 (539)
T PRK07008 453 AHPAVAEAACIACAHPKWDERPLLVVVKRPGAEVT---REELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLRE 529 (539)
T ss_pred hCCceeEEEEEecCCchhccceEEEEEeCCCCccC---HHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHH
Confidence 99999999999999987888899999887665444 568999999999999999999999999999999999999999
Q ss_pred HHhcC
Q 006776 602 IASRQ 606 (631)
Q Consensus 602 ~~~~~ 606 (631)
++.+.
T Consensus 530 ~~~~~ 534 (539)
T PRK07008 530 QFRDY 534 (539)
T ss_pred HHHhh
Confidence 98874
No 43
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.1e-66 Score=569.39 Aligned_cols=502 Identities=23% Similarity=0.313 Sum_probs=411.8
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.++|+++++ .+|+++|+++. .+.+||.||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++
T Consensus 22 ~l~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~ 94 (542)
T PRK06155 22 TLPAMLARQAE-RYPDRPLLVFG------GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWL 94 (542)
T ss_pred CHHHHHHHHHH-HCCCCeEEEeC------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 35678899988 79999999864 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++++++.+++..+++++++++++++.... ..+....... ..++.++.++.... .
T Consensus 95 G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-------~ 154 (542)
T PRK06155 95 GAIAVPINTALRGPQLEHILRNSGARLLVVEAALL---------AALEAADPGD----LPLPAVWLLDAPAS-------V 154 (542)
T ss_pred CCEEEEeccccCHHHHHHHHHhcCceEEEEChhhH---------HHHHHhcccc----cCcceEEEecCccc-------c
Confidence 99999999999999999999999999999976532 1111111111 23445554443211 0
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.....+...+... ...........++++++|+|||||||.||+|+++|.+++... ......+++++++++++..|++|
T Consensus 155 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~-~~~~~~~~~~~~~~~l~~~pl~~ 232 (542)
T PRK06155 155 SVPAGWSTAPLPP-LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWG-RNSAEDLEIGADDVLYTTLPLFH 232 (542)
T ss_pred ccccccchhhhcc-cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHH-HHHHHhcCCCCCCEEEEecCHHH
Confidence 0000111111111 001111223467899999999999999999999999965443 33345678899999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..+.. .++.+++.|+++++.+. .++..+++.|+++++|++.++|+++..|.+.... .....+++|.++.+|
T Consensus 233 ~~~~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~l~~~~~g~-- 303 (542)
T PRK06155 233 TNALN-AFFQALLAGATYVLEPR----FSASGFWPAVRRHGATVTYLLGAMVSILLSQPAR--ESDRAHRVRVALGPG-- 303 (542)
T ss_pred HHHHH-HHHHHHHcCceEEeeCC----CCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCc--cccccCceEEEEEcC--
Confidence 98864 56899999999998764 3789999999999999999999999999876542 234567899887666
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecC
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 453 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~ 453 (631)
+++.+.+++.+.++ +++++.||+||++.++..... ...++++|.|+++++++|+|+++++++.|+.|||+++++
T Consensus 304 ~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~---~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gei~v~~~ 377 (542)
T PRK06155 304 VPAALHAAFRERFG---VDLLDGYGSTETNFVIAVTHG---SQRPGSMGRLAPGFEARVVDEHDQELPDGEPGELLLRAD 377 (542)
T ss_pred CCHHHHHHHHHHcC---CCEEeeecccccCccccCCCC---CCCCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecC
Confidence 57888999999887 789999999999876554322 246788999999999999999999999999999999995
Q ss_pred CC-cccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEE
Q 006776 454 WP-GAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 532 (631)
Q Consensus 454 ~p-~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv 532 (631)
.| +++.||+++++.+...+. +|||+|||+|++++||+++++||.||+||++|.+|+|.+||++|.+||+|.+++|+
T Consensus 378 ~~~~~~~GY~~~~~~~~~~~~---~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~ 454 (542)
T PRK06155 378 EPFAFATGYFGMPEKTVEAWR---NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVF 454 (542)
T ss_pred CccccchhhcCCHHHHHHhhc---CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 43 799999999887766642 78999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 533 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 533 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
+++++..++.+.+++++..+...+ ..+++++|+++++++++|..|+++++||+|++||++|+.|++++..
T Consensus 455 ~v~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 524 (542)
T PRK06155 455 PVPSELGEDEVMAAVVLRDGTALE---PVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGVT 524 (542)
T ss_pred eecccccCceEEEEEEECCCCCCC---HHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhccC
Confidence 999988888899999887765544 5689999999999999999999999999999999999999997753
No 44
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-67 Score=582.88 Aligned_cols=522 Identities=16% Similarity=0.162 Sum_probs=395.6
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHH---CCCCCC-----------CEEEEEcc
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD---IGVKKG-----------DAVIIYLP 118 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~---~Gv~~g-----------d~V~i~~~ 118 (631)
.++.++|.++++ .+|+++|+++.. .+...+.+||+||.++|.++|++|.+ +|+++| |+|+|+++
T Consensus 61 ~~l~~~l~~~~~-~~p~~~Al~~~~-~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~ 138 (746)
T PTZ00342 61 KHIMKLLLEKYK-LNNNKIAIVEHS-CGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGS 138 (746)
T ss_pred chHHHHHHHHHh-hcCCceeEeccC-CCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcC
Confidence 456688888888 799999998642 11225789999999999999999997 499999 99999999
Q ss_pred CChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEE
Q 006776 119 MLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCL 198 (631)
Q Consensus 119 n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 198 (631)
|+++|+++++||+++|++.+|+++.++.+++.++|++++++++|++.... +.+.+....+ +.+++++
T Consensus 139 N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~---------~~l~~~~~~~----~~l~~ii 205 (746)
T PTZ00342 139 NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLV---------EGLLERKNEL----PHLKKLI 205 (746)
T ss_pred CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHH---------HHHHHhhccC----CCceEEE
Confidence 99999999999999999999999999999999999999999999854321 2222223333 6778888
Q ss_pred EEecCCcccc----------------ccC------------------------cCC-----------------CCCccch
Q 006776 199 TYENQSAMTR----------------ENT------------------------KWQ-----------------DGRDIWW 221 (631)
Q Consensus 199 ~~~~~~~~~~----------------~~~------------------------~~~-----------------~~~~~~~ 221 (631)
+++....... ... .+. ......|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 285 (746)
T PTZ00342 206 ILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILF 285 (746)
T ss_pred EECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEH
Confidence 7754211000 000 000 0000112
Q ss_pred hhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHh-cCCCCCcEEEEecccceecchhHH
Q 006776 222 QDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA-FDYKPSDVYWCTADCGWITGHSYV 300 (631)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~g~~~~ 300 (631)
++..+......+.....++|++.|+|||||||.||||++||++++.+........ ....+.+++++++|++|+++.. .
T Consensus 286 ~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~-~ 364 (746)
T PTZ00342 286 DDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERV-I 364 (746)
T ss_pred HHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHH-H
Confidence 2221111111122335679999999999999999999999999766554332211 1233568999999999999975 4
Q ss_pred HHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCC------ccccc----------------
Q 006776 301 TYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN------EYVTR---------------- 358 (631)
Q Consensus 301 ~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~------~~~~~---------------- 358 (631)
.+.+++.|++++++++ ++..+++.|++++||+++++|++++.|.+... ...++
T Consensus 365 ~~~~l~~G~~i~~~~~-----~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 439 (746)
T PTZ00342 365 AYLSFMLGGTINIWSK-----DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNG 439 (746)
T ss_pred HHHHHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcC
Confidence 5678999999998754 67889999999999999999999999875210 00000
Q ss_pred ------------------cCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCC
Q 006776 359 ------------------YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGS 420 (631)
Q Consensus 359 ------------------~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~ 420 (631)
.-.++||.+++||+++++++.+++...+| +++++.||+||+++..+.+.+. ...+++
T Consensus 440 ~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g---~~i~~gYGlTEt~~~~~~~~~~--~~~~gs 514 (746)
T PTZ00342 440 GFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN---VNYYQGYGLTETTGPIFVQHAD--DNNTES 514 (746)
T ss_pred CcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC---CCEEEeeccCcccceeeeccCC--CCCccc
Confidence 01268999999999999999999999887 7899999999998766554433 246789
Q ss_pred cCCCc-CCCceEEeCC-CCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEe
Q 006776 421 ATFPF-FGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTG 498 (631)
Q Consensus 421 ~G~p~-~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~G 498 (631)
+|.|+ |+++++|+|. ++...+.+..|||+++| |+++.|||++++.+...|.. +|||+|||+|++|+||+++|+|
T Consensus 515 vG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrG--p~v~~GY~~~pe~T~~~f~~--dGW~~TGDig~~d~dG~l~i~g 590 (746)
T PTZ00342 515 IGGPISPNTKYKVRTWETYKATDTLPKGELLIKS--DSIFSGYFLEKEQTKNAFTE--DGYFKTGDIVQINKNGSLTFLD 590 (746)
T ss_pred ccCcCCCcEEEEEecccccccCCCCCceEEEEec--CcccccccCChhhhhhhcCc--CCcccCCcEEEECCCCeEEEEc
Confidence 99998 9999999983 43444444579999999 99999999999999888754 7999999999999999999999
Q ss_pred ecCCeEec-CceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCC----------------CC---CcH-
Q 006776 499 RVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG----------------VP---YSE- 557 (631)
Q Consensus 499 R~dd~i~~-~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~----------------~~---~~~- 557 (631)
|+||+||+ +|++|+|.+||+++.+||.|.+|+|+|.. ....++|+|+++.. .. ..+
T Consensus 591 R~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~---~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~ 667 (746)
T PTZ00342 591 RSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDD---SMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEK 667 (746)
T ss_pred cCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccC---CccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHH
Confidence 99999996 59999999999999999999999999863 23358888887641 11 000
Q ss_pred ---------HHHHHHHHHH----H-hhcCCCccCceEEECC-CC----CCCCCchhhHHHHHHHHhcCc
Q 006776 558 ---------ELRKSLVLAV----R-KQIGAFAAPDKIHWAP-GL----PKTRSGKIMRRILRKIASRQL 607 (631)
Q Consensus 558 ---------~~~~~i~~~~----~-~~l~~~~~p~~i~~v~-~l----P~t~sGKi~r~~l~~~~~~~~ 607 (631)
++.+.+.+.+ + ..|..+..++.|.+++ .+ -.|++.|+.|+.+.+.|+..+
T Consensus 668 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i 736 (746)
T PTZ00342 668 LTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFI 736 (746)
T ss_pred hhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHH
Confidence 1122233222 2 2589999999988875 23 379999999999999998654
No 45
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-66 Score=568.98 Aligned_cols=503 Identities=23% Similarity=0.364 Sum_probs=412.1
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+++.+++. .+|+++|+++. .+++||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 9 ~~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 81 (528)
T PRK07470 9 LAHFLRQAAR-RFPDRIALVWG------DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLG 81 (528)
T ss_pred HHHHHHHHHH-HCCCceEEEEC------CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCC
Confidence 4467777777 79999999863 4689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++++++.++.+++.++++.++++++++++.... ......... .....++.+....
T Consensus 82 ~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~----~~~~~~~~~~~~~---------- 138 (528)
T PRK07470 82 AVWVPTNFRQTPDEVAYLAEASGARAMICHADFPE---------HAAAVRAAS----PDLTHVVAIGGAR---------- 138 (528)
T ss_pred eEEEecCccCCHHHHHHHHHhcCceEEEEcchhHH---------HHHHHHhhC----CcCceEEEeCCCc----------
Confidence 99999999999999999999999999999865321 112221111 3344444443211
Q ss_pred CCCccchhhhcccC-CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHh-cCCCCCcEEEEecccc
Q 006776 215 DGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA-FDYKPSDVYWCTADCG 292 (631)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~-~~~~~~d~~~~~~~~~ 292 (631)
....+.++.... ..........++++++|+|||||||.||+|+++|++++.......... .+..++|+++..+|++
T Consensus 139 --~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 216 (528)
T PRK07470 139 --AGLDYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLS 216 (528)
T ss_pred --ccccHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccch
Confidence 012233333221 111222345678999999999999999999999998654333222222 2567889999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|..+.. . +..++.|++.++..... ++++.+++.|+++++|++.++|++++.+.+... ....+++++|.+++||+
T Consensus 217 ~~~~~~-~-~~~~~~g~~~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gG~ 290 (528)
T PRK07470 217 HGAGIH-Q-LCQVARGAATVLLPSER--FDPAEVWALVERHRVTNLFTVPTILKMLVEHPA--VDRYDHSSLRYVIYAGA 290 (528)
T ss_pred hHHHHH-H-HHHHhcCceEEEecccC--cCHHHHHHHHHhcCCeEEechHHHHHHHHhCcC--cCCCCCcceEEEEEcCC
Confidence 998863 3 34577888888775432 478999999999999999999999999987643 23456789999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCC------CCCCCCCCcCCCcCCCceEEeCCCCcccCCCcce
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------AWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSG 446 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~------~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~G 446 (631)
++++.+.+++.+.++ .++++.||+||+++.+...... ......+++|.|+++++++++|++|++++.|+.|
T Consensus 291 ~l~~~~~~~~~~~~g---~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~G 367 (528)
T PRK07470 291 PMYRADQKRALAKLG---KVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGETG 367 (528)
T ss_pred CCCHHHHHHHHHHhC---cHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCce
Confidence 999999999988887 6799999999998765433211 0123457899999999999999999999999999
Q ss_pred eEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCccc
Q 006776 447 YLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQC 526 (631)
Q Consensus 447 el~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V 526 (631)
||++++ +.++.|||++++.+...+. +|||+|||++++++||++++.||.||+||++|++|+|.+||++|.+++.|
T Consensus 368 el~i~~--~~~~~gy~~~~~~~~~~~~---~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v 442 (528)
T PRK07470 368 EICVIG--PAVFAGYYNNPEANAKAFR---DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAV 442 (528)
T ss_pred EEEEeC--CccchhhcCCHHHHHhhhc---CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCc
Confidence 999999 9999999999887766553 78999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 527 AEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 527 ~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
.+++|++.+++..++.++++++..++...+ .++++++|++.|+++++|..++++++||+|++||++|+.|++++.+.
T Consensus 443 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 443 SEVAVLGVPDPVWGEVGVAVCVARDGAPVD---EAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred eEEEEEeccCcccCceeEEEEEECCCCCCC---HHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhc
Confidence 999999999988888899999887765444 56899999999999999999999999999999999999999998764
No 46
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.3e-66 Score=568.20 Aligned_cols=500 Identities=22% Similarity=0.321 Sum_probs=408.2
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+++++++. .+|+++|+++. .+++||.||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 25 l~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G 97 (527)
T TIGR02275 25 LTDILRDQAA-RYPDAIAIICG------NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLG 97 (527)
T ss_pred HHHHHHHHHH-HCCCceEEEeC------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcC
Confidence 5577888887 79999999853 4689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++++++..+.+++.++++.++++++++++.... .............+ +.++.+++...... .
T Consensus 98 ~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--------~ 161 (527)
T TIGR02275 98 IAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSL----FDYDAFARQLQSKL----PTLRNIIVAGQTRV--------E 161 (527)
T ss_pred eEEeccccccCHHHHHHHHHhcCCcEEEEcCcccc----cchHHHHHHHHhhC----CcceEEEEecCCCC--------c
Confidence 99999999999999999999999999998765311 01111111111111 34444443321100 0
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
. .....+.......+.....++++++|+|||||||.||+|+++|.+++.+... ....+.+.++|++++.+|++|.
T Consensus 162 ---~-~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~-~~~~~~~~~~d~~l~~~P~~h~ 236 (527)
T TIGR02275 162 ---A-ELFLWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRR-SVEICWLTQQTRYLCALPAAHN 236 (527)
T ss_pred ---c-hhhHHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHH-HHhhcCCCcCCEEEECCChHhh
Confidence 0 0011111111112223456789999999999999999999999996655544 3346788899999999999999
Q ss_pred cchhH-HHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 295 TGHSY-VTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 295 ~g~~~-~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
+++.. .+++++..|+++++... +++..+++.++++++|++.++|+++..+.+.... ...+++++|.+++||++
T Consensus 237 ~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~gG~~ 310 (527)
T TIGR02275 237 YPLSSPGALGVFYAGGCVVLAPD----PSPTDCFPLIERHKVTVTALVPPAVALWMQAASK--SRYDLSSLKLLQVGGAK 310 (527)
T ss_pred hhhhHHHHHHHHhcCCeEEECCC----CCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccc--cCCCccceEEEEEcCCC
Confidence 88654 46788999999988653 4788999999999999999999999999876542 34567899999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCc-CCCceEEeCCCCcccCCCcceeEEEec
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPF-FGVQPVIVDEKGVEIEGECSGYLCIKS 452 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~-~~~~~~i~d~~g~~~~~g~~Gel~v~~ 452 (631)
+++++++++.+.++ +++++.||+||++.... ..........+++|+|+ ++..++|+|++|++++.|+.|||+++|
T Consensus 311 l~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~-~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~Gei~v~g 386 (527)
T TIGR02275 311 FSEAAARRVPAVFG---CQLQQVFGMAEGLVNYT-RLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGETGMLLTRG 386 (527)
T ss_pred CCHHHHHHHHHHhC---CeEEeeeccCccCcccc-CCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCceEEEecC
Confidence 99999999999987 78999999999654332 11111223557899999 488999999999999999999999999
Q ss_pred CCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEE
Q 006776 453 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVV 532 (631)
Q Consensus 453 ~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv 532 (631)
|.++.|||++++.+...+.. +|||+|||+|++++||++++.||.||+|+++|++|+|.+||++|.+||+|.+++|+
T Consensus 387 --~~~~~gY~~~~~~~~~~~~~--dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~ 462 (527)
T TIGR02275 387 --PYTFRGYYKAPEHNAAAFDA--EGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALV 462 (527)
T ss_pred --CccchhhcCChhHhHhhcCc--CCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEE
Confidence 99999999999888776654 78999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhh-cCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 533 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 533 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
+++++..++.++++|+++++. .+ .++|++++++. ++.+++|..++++++||+|++||++|+.||
T Consensus 463 ~~~~~~~~~~~~a~vv~~~~~-~~---~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 463 SMPDELLGEKSCAFIVVRDPA-LK---AAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred ecCCcccccEEEEEEEECCCC-CC---HHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 999988889999999987653 23 56899999985 999999999999999999999999999874
No 47
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.6e-66 Score=566.64 Aligned_cols=509 Identities=22% Similarity=0.319 Sum_probs=417.4
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
+.+.+++++.++ .+|+++|+++.+.+ +..+.+||.||.+++.++|++|.++|+++||+|+++++|++++++++|||++
T Consensus 7 ~~l~~~~~~~a~-~~p~~~a~~~~~~~-~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~ 84 (517)
T PRK08008 7 QHLRQMWDDLAD-VYGHKTALIFESSG-GVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAK 84 (517)
T ss_pred ccHHHHHHHHHH-HCCCceEEEcccCC-CccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 457788888888 79999999986543 4457899999999999999999999999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCc
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 212 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 212 (631)
+|+++++++++++.+++.+++++++++++++++... +.+.+..... ...++.+++...... .
T Consensus 85 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~~----~-- 146 (517)
T PRK08008 85 IGAIMVPINARLLREESAWILQNSQASLLVTSAQFY---------PMYRQIQQED---ATPLRHICLTRVALP----A-- 146 (517)
T ss_pred cCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchh---------HHHHHHHhhc---cccCcEEEEecCCCc----c--
Confidence 999999999999999999999999999999987532 2233332221 144555555443211 0
Q ss_pred CCCCCccchhhhcccCCCC-CCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccc
Q 006776 213 WQDGRDIWWQDVVPKYPTK-CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 291 (631)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 291 (631)
......+.+........ .......++++++|+|||||||.||+|+++|++++... ........+.+++++++.+|+
T Consensus 147 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~-~~~~~~~~~~~~~~~~~~~p~ 223 (517)
T PRK08008 147 --DDGVSSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAG-YYSAWQCALRDDDVYLTVMPA 223 (517)
T ss_pred --cccccCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHH-HHHhhhcCCCCCCeEEEecCc
Confidence 01122233332222111 11223457899999999999999999999999965432 223334567889999999999
Q ss_pred ceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEcc
Q 006776 292 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 371 (631)
Q Consensus 292 ~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~G 371 (631)
.|..+....++.++..|+++++.+. +++..+++.++++++|++.++|++++.+....... ...+.+++.+.++
T Consensus 224 ~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~~~~l~~~~~~- 296 (517)
T PRK08008 224 FHIDCQCTAAMAAFSAGATFVLLEK----YSARAFWGQVCKYRATITECIPMMIRTLMVQPPSA--NDRQHCLREVMFY- 296 (517)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEccc----cCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcc--ccccccceeeEEe-
Confidence 9988777788899999999999865 47899999999999999999999999988654322 1234578877775
Q ss_pred CCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEe
Q 006776 372 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 451 (631)
Q Consensus 372 e~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~ 451 (631)
.+++++.+..+.+.++ +++++.||+||+++.++...+.. ....+++|.|+++++++|+|++|++++.|+.|||+++
T Consensus 297 ~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~v~ 372 (517)
T PRK08008 297 LNLSDQEKDAFEERFG---VRLLTSYGMTETIVGIIGDRPGD-KRRWPSIGRPGFCYEAEIRDDHNRPLPAGEIGEICIK 372 (517)
T ss_pred cCCCHHHHHHHHHHhC---CeEEeeccccccccccccCCccc-cccCCccccCCCCcEEEEECCCCCCCCCCCcceEEEe
Confidence 4789999999999887 78999999999987665444322 3456789999999999999999999999999999999
Q ss_pred cC-CCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEE
Q 006776 452 SS-WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAA 530 (631)
Q Consensus 452 ~~-~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~ 530 (631)
|+ .++++.|||++++.+.+.+.. +|||+|||+|++|+||+++++||.||+||++|++|+|.+||+++.+|+.|.+++
T Consensus 373 g~~~~~~~~gy~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~ 450 (517)
T PRK08008 373 GVPGKTIFKEYYLDPKATAKVLEA--DGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIV 450 (517)
T ss_pred CCCCcchhhhHhCChHHHhhcccC--CCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEE
Confidence 73 268999999999888766643 789999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 531 VVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 531 vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
|++++++..++.+.++|+++++...+ .++|+++++++++++++|..++++++||+|++||++|+.|+
T Consensus 451 v~g~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 451 VVGIKDSIRDEAIKAFVVLNEGETLS---EEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred EEccCCCCCCceEEEEEEECCCCCCC---HHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 99999988888999999998765544 56899999999999999999999999999999999999874
No 48
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-66 Score=562.94 Aligned_cols=479 Identities=21% Similarity=0.280 Sum_probs=397.4
Q ss_pred hhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCC
Q 006776 56 YNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGA 135 (631)
Q Consensus 56 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~ 135 (631)
.+.|.++++ .+|+++|+++. ..++||.||.+++.++|++|.+.|. +||+|+|+++|++++++++|||+++|+
T Consensus 4 ~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~ 75 (487)
T PRK07638 4 TKEYKKHAS-LQPNKIAIKEN------DRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGW 75 (487)
T ss_pred HHHHHHHHH-hCCCCeEEecC------CcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCe
Confidence 455677777 79999999853 4689999999999999999999985 899999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCC
Q 006776 136 VHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQD 215 (631)
Q Consensus 136 v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 215 (631)
+++|+++.++.+++.++++.++++++++++...... . . .. ..++.+..
T Consensus 76 ~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~---------~----~-----~~-~~~~~~~~------------- 123 (487)
T PRK07638 76 TCVPLDIKWKQDELKERLAISNADMIVTERYKLNDL---------P----D-----EE-GRVIEIDE------------- 123 (487)
T ss_pred EEEecCccCCHHHHHHHHHhCCCCEEEEecccccch---------h----h-----cc-ceEEEehh-------------
Confidence 999999999999999999999999999987532110 0 0 00 11221111
Q ss_pred CCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceec
Q 006776 216 GRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWIT 295 (631)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 295 (631)
+.+................+++++|+|||||||.||+|+++|++++.+.. .....+++.++|+++...++.|..
T Consensus 124 -----~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~-~~~~~~~~~~~d~~~~~~~l~~~~ 197 (487)
T PRK07638 124 -----WKRMIEKYLPTYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFD-CNVHDFHMKREDSVLIAGTLVHSL 197 (487)
T ss_pred -----hhhhhhhccccccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHH-HHHHhcCcCCCCEEEEeecchHHH
Confidence 00111111111111112357789999999999999999999999665544 344567889999999999999887
Q ss_pred chhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCC
Q 006776 296 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPIN 375 (631)
Q Consensus 296 g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~ 375 (631)
+. +.++.++..|+++++.+. +++..+++.++++++|++.++|+++..|.+... ...+.+.++++|++++
T Consensus 198 ~l-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------~~~~~~~~~~~G~~l~ 266 (487)
T PRK07638 198 FL-YGAISTLYVGQTVHLMRK----FIPNQVLDKLETENISVMYTVPTMLESLYKENR------VIENKMKIISSGAKWE 266 (487)
T ss_pred HH-HHHHHHHccCcEEEEcCC----CCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC------cCCceeEEEEcCCCCC
Confidence 64 667888999999998764 488999999999999999999999999988632 1245566778899999
Q ss_pred HhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCC
Q 006776 376 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP 455 (631)
Q Consensus 376 ~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p 455 (631)
+++.+++.+.++ ++.+++.||+||++.+..... ......++++|.|+++++++|+|++|.+++.|+.|||++++ |
T Consensus 267 ~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~Gel~v~~--~ 341 (487)
T PRK07638 267 AEAKEKIKNIFP--YAKLYEFYGASELSFVTALVD-EESERRPNSVGRPFHNVQVRICNEAGEEVQKGEIGTVYVKS--P 341 (487)
T ss_pred HHHHHHHHHHcC--CCeEEEEecCCccCceEEecc-cccCCCCCCCCcccCCcEEEEECCCCCCCCCCCCeEEEEec--c
Confidence 999999999986 488999999999997655433 22235678999999999999999999999999999999999 8
Q ss_pred cccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeee
Q 006776 456 GAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVE 535 (631)
Q Consensus 456 ~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~ 535 (631)
.++.|||++++.+... . .+|||+|||++++|++|++++.||++|+||++|++|+|.+||++|.+||+|.+++|++.+
T Consensus 342 ~~~~gy~~~~~~~~~~-~--~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~ 418 (487)
T PRK07638 342 QFFMGYIIGGVLAREL-N--ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVP 418 (487)
T ss_pred cceeeecCCHHHHhhh-c--cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecC
Confidence 9999999998765443 2 378999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 536 HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 536 ~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
++..++.++++|+.. .. .+++++++++.++++++|..++++++||+|.+||++|+.|++++.+.
T Consensus 419 ~~~~g~~~~~~v~~~----~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 419 DSYWGEKPVAIIKGS----AT---KQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQ 482 (487)
T ss_pred chhcCCeeEEEEECC----CC---HHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcc
Confidence 988888888888641 22 66889999999999999999999999999999999999999998764
No 49
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=7.3e-67 Score=573.65 Aligned_cols=514 Identities=21% Similarity=0.246 Sum_probs=395.8
Q ss_pred hhHhhhhhhhhhccCCCCeeEEEEEcCCC----CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHH
Q 006776 52 TNICYNCLDRNIEAGLGDKVAIYWEANDP----GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAM 127 (631)
Q Consensus 52 ~n~~~~~l~~~~~~~~~~~~A~~~~~~~~----~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~ 127 (631)
+|+. ..|.+++. .+|+++|+++.+... ...+.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++
T Consensus 6 ~~~~-~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~ 83 (552)
T PRK09274 6 ANIA-RHLPRAAQ-ERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALT 83 (552)
T ss_pred hhHH-HHHHHHHH-hCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHH
Confidence 4444 45666666 699999999753210 11248999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc
Q 006776 128 LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 207 (631)
Q Consensus 128 lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 207 (631)
|||+++|++++|++|.++.+++.+++++++++++|+++... . ...+.... ....+.++.+.....
T Consensus 84 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~----------~-~~~~~~~~--~~~~~~~i~~~~~~~-- 148 (552)
T PRK09274 84 FALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH----------L-ARRLFGWG--KPSVRRLVTVGGRLL-- 148 (552)
T ss_pred HHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH----------H-HHHHhccC--ccchhheeccccccc--
Confidence 99999999999999999999999999999999999864210 0 00000000 012222332221100
Q ss_pred cccCcCCCCCccchhhhcccC-CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEE
Q 006776 208 RENTKWQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYW 286 (631)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~ 286 (631)
.....+.++.... ..........++++++|+|||||||.||+|+++|++++.+.. .....+++.++++.+
T Consensus 149 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~ 219 (552)
T PRK09274 149 --------WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIE-ALREDYGIEPGEIDL 219 (552)
T ss_pred --------cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHH-HHHHHhCCCCCceee
Confidence 0011233332111 111222335678999999999999999999999999654443 344567889999999
Q ss_pred EecccceecchhHHHHHhhhcCceEEEecCC---CCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCc
Q 006776 287 CTADCGWITGHSYVTYGPMLNGASVVVFEGA---PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKS 363 (631)
Q Consensus 287 ~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~---~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~ 363 (631)
+.+|+.|+.+ +..|+++++.... +..+++..+++.|+++++|+++++|++++.|.+.... ...++++
T Consensus 220 ~~~pl~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~--~~~~~~~ 289 (552)
T PRK09274 220 PTFPLFALFG--------PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEA--NGIKLPS 289 (552)
T ss_pred eccCHHHhhh--------hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhh--cCCCCch
Confidence 8888765432 3457888776422 2235789999999999999999999999999876432 3457899
Q ss_pred eeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCC------C--CCCCCCCcCCCcCCCceEEeCC
Q 006776 364 LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------A--WPQKPGSATFPFFGVQPVIVDE 435 (631)
Q Consensus 364 lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~------~--~~~~~~~~G~p~~~~~~~i~d~ 435 (631)
||.+++||+++++++.+++.+.++. ++++++.||+||++++....... . ......++|+|+++++++|+|+
T Consensus 290 lr~~~~gG~~~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~ 368 (552)
T PRK09274 290 LRRVISAGAPVPIAVIERFRAMLPP-DAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAI 368 (552)
T ss_pred hhEEEecCCcCCHHHHHHHHHHcCC-CceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEec
Confidence 9999999999999999999999963 37899999999998755432211 0 0112246899999999999985
Q ss_pred ---------CCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCC--eEecCceEEEccCCeEEEEeecCCeE
Q 006776 436 ---------KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRDKDGYHWLTGRVDDVI 504 (631)
Q Consensus 436 ---------~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g--~~~TGDl~~~~~dG~l~i~GR~dd~i 504 (631)
++++++.|+.|||+++| |.++.|||++++.+...+....+| ||+|||+|++|+||+++++||.||+|
T Consensus 369 ~~~~~~~~~~~~~~~~g~~Gel~v~g--~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i 446 (552)
T PRK09274 369 SDAPIPEWDDALRLATGEIGEIVVAG--PMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRV 446 (552)
T ss_pred cccccccccccccCCCCCeeEEEEec--CcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeE
Confidence 46778899999999999 999999999998877666544456 99999999999999999999999999
Q ss_pred ecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCc-HHHHHHHHHHHHhhcCCCccCceEEEC
Q 006776 505 NVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWA 583 (631)
Q Consensus 505 ~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~i~~~~~~~l~~~~~p~~i~~v 583 (631)
|++|.+|+|.|||++|.+||+|.+|+|++++++ .++.++++|++.++...+ +++.+++++.++. +..++.|+.++++
T Consensus 447 ~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~ 524 (552)
T PRK09274 447 ETAGGTLYTIPCERIFNTHPGVKRSALVGVGVP-GAQRPVLCVELEPGVACSKSALYQELRALAAA-HPHTAGIERFLIH 524 (552)
T ss_pred EECCEEECcHHHHHHHHhCcccceeEEEEeCCC-CCceEEEEEEccCccccchHHHhhhhHHHHHh-cCCCcceeEEecc
Confidence 999999999999999999999999999999876 467788999888765443 3345566655544 3456778899999
Q ss_pred CCCCCC--CCchhhHHHHHHHHhcC
Q 006776 584 PGLPKT--RSGKIMRRILRKIASRQ 606 (631)
Q Consensus 584 ~~lP~t--~sGKi~r~~l~~~~~~~ 606 (631)
++||+| ++||++|++|++++.+.
T Consensus 525 ~~lP~t~~~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 525 PSFPVDIRHNAKIFREKLAVWAAKQ 549 (552)
T ss_pred CCCCccccccccccHHHHHHHHHHh
Confidence 999999 79999999999988764
No 50
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-67 Score=582.55 Aligned_cols=510 Identities=20% Similarity=0.184 Sum_probs=396.1
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcC---CCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHH
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEAN---DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 131 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~---~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~ 131 (631)
+.++|++++. .+|+++|+++.+. ..+..+.+||+||.+++.++|++|.+. +++||+|+++++|++++++++|||+
T Consensus 23 l~~~l~~~a~-~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA~~ 100 (631)
T PRK07769 23 LVRHVERWAK-VRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFGAL 100 (631)
T ss_pred HHHHHHHHHH-hCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHHHH
Confidence 5577888887 7999999997531 112357899999999999999999887 8999999999999999999999999
Q ss_pred HhCCEEEec-CCCCC--HHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccc
Q 006776 132 RIGAVHSVV-FAGFS--SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 208 (631)
Q Consensus 132 ~~G~v~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 208 (631)
++|++++|+ ++..+ .+++.+++++++++++|+++... ..+......+.. .....++.++....
T Consensus 101 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~--- 166 (631)
T PRK07769 101 YAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSA---------EGVRKFFRARPA--KERPRVIAVDAVPD--- 166 (631)
T ss_pred HcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHH---------HHHHHHHhhccc--cccceEEEcccccc---
Confidence 999999999 45554 68899999999999999976432 112222111100 01122332221100
Q ss_pred ccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEe
Q 006776 209 ENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCT 288 (631)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~ 288 (631)
... .........++++++|+|||||||.||||+++|++++.+... ....+++.+++++++.
T Consensus 167 ---------------~~~---~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~-~~~~~~~~~~d~~l~~ 227 (631)
T PRK07769 167 ---------------EVG---ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQ-VIDALEGQEGDRGVSW 227 (631)
T ss_pred ---------------ccc---cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHH-HHHHcCCCCcceEEEe
Confidence 000 000111245789999999999999999999999996554433 3446788899999999
Q ss_pred cccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCC---cEEeecHHHHHHHHhcC---CccccccCCC
Q 006776 289 ADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV---TIFYTAPTLVRSLMRDG---NEYVTRYSRK 362 (631)
Q Consensus 289 ~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~v---t~l~~~P~~l~~l~~~~---~~~~~~~~l~ 362 (631)
+|++|.+|... ++.+++.|+++++........++..+++.++++++ +.+..+|+++..+.... .......+++
T Consensus 228 ~Pl~h~~gl~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~ 306 (631)
T PRK07769 228 LPFFHDMGLIT-VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLS 306 (631)
T ss_pred CCCcCchhhHH-HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchh
Confidence 99999999754 45667789999887542222378889999999986 78999999887776531 1111245789
Q ss_pred ceeEEEEccCCCCHhHHHHHHHHhCC---CCcceecccccccccceecccCCCCC-------------------------
Q 006776 363 SLRVLGSVGEPINPSAWRWFFNVVGD---SRCPISDTWWQTETGGFMITPLPGAW------------------------- 414 (631)
Q Consensus 363 ~lr~v~~~Ge~l~~~~~~~~~~~~~~---~~~~i~~~yg~tE~g~~~~~~~~~~~------------------------- 414 (631)
+||.+++||+++++++.+++.+.++. ....+++.||+||++.+++.......
T Consensus 307 ~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 386 (631)
T PRK07769 307 NVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPN 386 (631)
T ss_pred heeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCC
Confidence 99999999999999999999998842 12459999999999865543221110
Q ss_pred CCCCCCcCCCcCCCceEEeCC-CCcccCCCcceeEEEecCCCcccccccCCchhhhhhccc---------------cCCC
Q 006776 415 PQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK---------------PFPG 478 (631)
Q Consensus 415 ~~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~---------------~~~g 478 (631)
.....++|+|+++..++|+|+ +|++++.|+.|||+++| |+++.|||++++.+...|.. ..+|
T Consensus 387 ~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~g--p~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~g 464 (631)
T PRK07769 387 AVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHG--NNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDAL 464 (631)
T ss_pred ceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecC--CCccccccCChhHHHHHHhhhcccccccccccCcccCCC
Confidence 012357999999999999994 78999999999999999 99999999999888777642 1248
Q ss_pred eEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhc-Ccccce--EEEEeeec-------------------
Q 006776 479 YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVS-HPQCAE--AAVVGVEH------------------- 536 (631)
Q Consensus 479 ~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~-~~~V~~--~~vv~~~~------------------- 536 (631)
||+|||+|+++ ||+++|+||.||+||++|++|+|.|||++|.+ ||.|.+ ++|+++++
T Consensus 465 w~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~ 543 (631)
T PRK07769 465 WVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDP 543 (631)
T ss_pred eeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEeccccccccccccccccccccc
Confidence 99999999995 99999999999999999999999999999986 899998 99999998
Q ss_pred CCCCeeEEEEEEeCCCC-CCcHHHHHHHHHHHHhhcCC-Cc-cCceEEECC--CCCCCCCchhhHHHHHHHHhcC
Q 006776 537 EVKGQGIYAFVTLVEGV-PYSEELRKSLVLAVRKQIGA-FA-APDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 537 ~~~~~~~~~~v~~~~~~-~~~~~~~~~i~~~~~~~l~~-~~-~p~~i~~v~--~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
+..++.++++|+++++. ..+ .++|.++|+++|.. ++ .|+.+++++ +||+|++|||+|+.|++.+.+.
T Consensus 544 ~~~ge~~~a~v~~~~~~~~~~---~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~ 615 (631)
T PRK07769 544 EDTSEQLVIVAERAPGAHKLD---PQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDG 615 (631)
T ss_pred CCCCccEEEEEEecCcccccc---HHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcC
Confidence 55788999999988763 223 56788889988885 45 488888887 7999999999999999998754
No 51
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-66 Score=566.16 Aligned_cols=507 Identities=27% Similarity=0.376 Sum_probs=428.5
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.++|.++++ .+|+++|+++. .+.+||+||++++.++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 7 ~l~~~l~~~~~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~ 79 (521)
T PRK06187 7 TIGRILRHGAR-KHPDKEAVYFD------GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKI 79 (521)
T ss_pred CHHHHHHHHHH-HCCCceEEEeC------CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 57788888888 79999999865 345999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++++++.++.+++..+++.+++++++++.... +.+......+ +.++++++++.... . .
T Consensus 80 G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~----~--~ 140 (521)
T PRK06187 80 GAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFV---------PLLAAILPQL----PTVRTVIVEGDGPA----A--P 140 (521)
T ss_pred CeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHH---------HHHHHHhhcc----CCccEEEEecCccc----c--c
Confidence 99999999999999999999999999999986532 3333333333 45566665544321 0 1
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.......+.++....+..........+++++++|||||||.||+|.++|.+++..... ....+++.++|++++.+|++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~-~~~~~~~~~~d~~~~~~~~~~ 219 (521)
T PRK06187 141 LAPEVGEYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLA-VCAWLKLSRDDVYLVIVPMFH 219 (521)
T ss_pred cccccccHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHH-HHHhhCCCCCCEEEEeCCchH
Confidence 1122334555554433333344566789999999999999999999999995544443 344788999999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..+.... +.++..|+++++.++. ++..+++.++++++|.++++|++++.|.+.... ...+++++|.+++|||+
T Consensus 220 ~~~~~~~-~~~l~~G~~~v~~~~~----~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~l~~v~~~Ge~ 292 (521)
T PRK06187 220 VHAWGLP-YLALMAGAKQVIPRRF----DPENLLDLIETERVTFFFAVPTIWQMLLKAPRA--YFVDFSSLRLVIYGGAA 292 (521)
T ss_pred HhhHHHH-HHHHHhCCEEEecCCC----CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCC--CccCcchhhEEEEcCcC
Confidence 8886544 4589999999998763 789999999999999999999999999987653 34567899999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCC----CCCCCCcCCCcCCCceEEeCCCCcccCC--Cccee
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAW----PQKPGSATFPFFGVQPVIVDEKGVEIEG--ECSGY 447 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~----~~~~~~~G~p~~~~~~~i~d~~g~~~~~--g~~Ge 447 (631)
+++++++++.+.++ +++++.||+||+|+++........ ....+++|.|++++.++|+|+++.+++. |+.||
T Consensus 293 l~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~Ge 369 (521)
T PRK06187 293 LPPALLREFKEKFG---IDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEVGE 369 (521)
T ss_pred CCHHHHHHHHHHhC---cchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCeeE
Confidence 99999999999985 789999999999876654432221 1266889999999999999999999988 89999
Q ss_pred EEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccc
Q 006776 448 LCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCA 527 (631)
Q Consensus 448 l~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~ 527 (631)
|++++ |.++.||+++++.+...+. +|||+|||+++++++|++++.||.||+||++|.+++|.+||++|.++++|.
T Consensus 370 l~v~~--~~~~~~y~~~~~~~~~~~~---~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~ 444 (521)
T PRK06187 370 IIVRG--PWLMQGYWNRPEATAETID---GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVA 444 (521)
T ss_pred EEEEC--cchhhhhcCCHHHHHHHhh---CCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCce
Confidence 99999 8999999999887766654 579999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 528 EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 528 ~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
+++|++++++..++.+++++++.++...+ .+++++++++.+++++.|..++++++||+|++||++|+.|++++.+
T Consensus 445 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 445 EVAVIGVPDEKWGERPVAVVVLKPGATLD---AKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAE 519 (521)
T ss_pred EEEEEeccCCCcCceEEEEEEECCCCCCC---HHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhc
Confidence 99999999888889999999988766544 5678999999999999999999999999999999999999999875
No 52
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-66 Score=572.55 Aligned_cols=522 Identities=19% Similarity=0.236 Sum_probs=417.9
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
+.++|++++. .+|+++|+++.++ ..+.+||.||.+++.++|++|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 12 ~~~~l~~~a~-~~~~~~a~~~~~~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~ 87 (576)
T PRK05620 12 LTRILEYGST-VHGDTTVTTWGGA---EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACM 87 (576)
T ss_pred HHHHHHHHHH-hCCCceEEEEcCC---ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc
Confidence 5577888887 7999999998542 36899999999999999999986 89999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|+++++++|.++.+++.++++.++++++|+++... ..+.+....+ +.++.++.+..... .......
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~i~~~~~~~~-~~~~~~~ 153 (576)
T PRK05620 88 GAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLA---------EQLGEILKEC----PCVRAVVFIGPSDA-DSAAAHM 153 (576)
T ss_pred CCEEeecccccCHHHHHHHHhccCCcEEEEChhhH---------HHHHHHHhhC----ccccEEEEecCccc-ccchhcc
Confidence 99999999999999999999999999999976432 3333443333 45565655542211 0000000
Q ss_pred C-CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHH-HHHhcCCCCCcEEEEeccc
Q 006776 214 Q-DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT-FKYAFDYKPSDVYWCTADC 291 (631)
Q Consensus 214 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~-~~~~~~~~~~d~~~~~~~~ 291 (631)
. .....+|.++........+.....++++++++|||||||.||||+++|+++....... ....+++.+++++++.+|+
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl 233 (576)
T PRK05620 154 PEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPI 233 (576)
T ss_pred ccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCCh
Confidence 0 1123346666543332222334567899999999999999999999999865433221 1234678899999999999
Q ss_pred ceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEcc
Q 006776 292 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 371 (631)
Q Consensus 292 ~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~G 371 (631)
+|.+|. ..++.++..|+++++.... +++..+++.|++++++++.++|+++..++..... ...+..++|.+++||
T Consensus 234 ~h~~g~-~~~~~~l~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~~gG 307 (576)
T PRK05620 234 YHVLSW-GVPLAAFMSGTPLVFPGPD---LSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLK--NPPERMSLQEIYVGG 307 (576)
T ss_pred HHhhhh-HHHHHHHhcCceEEecCCC---CCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhc--cCcccCceeEEEEcC
Confidence 999986 4567889999999886532 4789999999999999999999999988765321 112345899999999
Q ss_pred CCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC------CCCCCCCcCCCcCCCceEEeCCCCcccC--CC
Q 006776 372 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA------WPQKPGSATFPFFGVQPVIVDEKGVEIE--GE 443 (631)
Q Consensus 372 e~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~------~~~~~~~~G~p~~~~~~~i~d~~g~~~~--~g 443 (631)
+++++++.+++.+.++ +++++.||+||++.......+.. ......++|++.++++++++|+ |..++ ++
T Consensus 308 ~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~ 383 (576)
T PRK05620 308 SAVPPILIKAWEERYG---VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTDR 383 (576)
T ss_pred CCCCHHHHHHHHHHhC---CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCCC
Confidence 9999999999998886 78999999999987554332211 0012347899999999999997 77664 46
Q ss_pred cceeEEEecCCCcccccccCCchhh----hhhccc----------cCCCeEecCceEEEccCCeEEEEeecCCeEecCce
Q 006776 444 CSGYLCIKSSWPGAFRTLYGDHERY----ETTYFK----------PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGH 509 (631)
Q Consensus 444 ~~Gel~v~~~~p~~~~gy~~~~~~~----~~~~~~----------~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~ 509 (631)
..|||+++| +.++.|||++++.+ ...|.. ..+|||+|||++++++||++++.||.||+||.+|+
T Consensus 384 ~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~ 461 (576)
T PRK05620 384 NEGEIQVRG--NWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGE 461 (576)
T ss_pred CceEEEEEc--CcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCE
Confidence 789999999 89999999998755 222110 12689999999999999999999999999999999
Q ss_pred eechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCC
Q 006776 510 RIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKT 589 (631)
Q Consensus 510 ~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t 589 (631)
+|+|.+||++|.+||.|.+++|++.+++..|+.+++++++.++...++...++|+++|+++|+++++|+.|+++++||+|
T Consensus 462 ~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t 541 (576)
T PRK05620 462 WIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKT 541 (576)
T ss_pred EEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCC
Confidence 99999999999999999999999999988889999999988775544334788999999999999999999999999999
Q ss_pred CCchhhHHHHHHHHhcC
Q 006776 590 RSGKIMRRILRKIASRQ 606 (631)
Q Consensus 590 ~sGKi~r~~l~~~~~~~ 606 (631)
.+||++|+.|++++++.
T Consensus 542 ~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 542 SVGKFDKKDLRQHLADG 558 (576)
T ss_pred CcccCcHHHHHHHHhcC
Confidence 99999999999999854
No 53
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.4e-66 Score=566.60 Aligned_cols=511 Identities=23% Similarity=0.290 Sum_probs=420.7
Q ss_pred CCchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHH
Q 006776 49 GGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAML 128 (631)
Q Consensus 49 ~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~l 128 (631)
..+.|+.+. +++++. .+|+++|+++. .+.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 14 ~~~~n~~~~-~~~~a~-~~~~~~a~~~~------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~ 85 (542)
T PRK07786 14 ARRQNWVNQ-LARHAL-MQPDAPALRFL------GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVL 85 (542)
T ss_pred ccccCHHHH-HHHHHH-HCCCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 357788866 455566 69999999865 4689999999999999999999999999999999999999999999
Q ss_pred HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccc
Q 006776 129 ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 208 (631)
Q Consensus 129 A~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 208 (631)
||+++|++++|+++.++.+++..++++++++++++++... ..+....... +.++.++++.+...
T Consensus 86 a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~--- 149 (542)
T PRK07786 86 AANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA---------PVATAVRDIV----PLLSTVVVAGGSSD--- 149 (542)
T ss_pred HHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH---------HHHHHhhhcc----CccceEEEecCCCc---
Confidence 9999999999999999999999999999999999976432 1222111111 45566665543210
Q ss_pred ccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCC-CCCcEEEE
Q 006776 209 ENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDY-KPSDVYWC 287 (631)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~-~~~d~~~~ 287 (631)
.....+++++.......+......+++++++|||||||.||+|+++|++++.+... ....+++ ..++++++
T Consensus 150 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~ 221 (542)
T PRK07786 150 -------DSVLGYEDLLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMT-CLRTNGADINSDVGFV 221 (542)
T ss_pred -------ccccCHHHHhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHH-HHHhcCCCCCCceEEE
Confidence 01233444433222222233456788999999999999999999999996655443 3335565 56889999
Q ss_pred ecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEE
Q 006776 288 TADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVL 367 (631)
Q Consensus 288 ~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v 367 (631)
.+|+.|++|. ..++.++..|+++++..... +++..+++.++++++|+++++|+++..+....... . ...++|.+
T Consensus 222 ~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~--~-~~~~lr~i 295 (542)
T PRK07786 222 GVPLFHIAGI-GSMLPGLLLGAPTVIYPLGA--FDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQAR--P-RDLALRVL 295 (542)
T ss_pred ecchHHHHHH-HHHHHHHHccCEEEEccCCC--cCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccC--c-cCcceEEE
Confidence 9999998886 67788999999999975322 48899999999999999999999999998764321 1 22479999
Q ss_pred EEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCccee
Q 006776 368 GSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGY 447 (631)
Q Consensus 368 ~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Ge 447 (631)
++||+++++++++++.+.++ +.++++.||+||++.+.+...........+++|+|++++.++|+|+++++++.|+.||
T Consensus 296 ~~gg~~~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Ge 373 (542)
T PRK07786 296 SWGAAPASDTLLRQMAATFP--EAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEVGE 373 (542)
T ss_pred EECCCCCCHHHHHHHHHHcC--CCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCceE
Confidence 99999999999999999986 4889999999999876543322222345688999999999999999999999999999
Q ss_pred EEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccc
Q 006776 448 LCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCA 527 (631)
Q Consensus 448 l~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~ 527 (631)
|+++| |.++.||+++++.+...+. +|||+|||+++++++|+++++||.||+||++|.+|++.+||++|.+||.|.
T Consensus 374 l~v~g--~~~~~gy~~~~~~~~~~f~---~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~ 448 (542)
T PRK07786 374 IVYRA--PTLMSGYWNNPEATAEAFA---GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIV 448 (542)
T ss_pred EEEEC--hhhhhhhcCCHHHHHHHhh---CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCcc
Confidence 99999 9999999999988776653 689999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 528 EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 528 ~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
+++|++.+++..++.++++|++.+.... ...+++.+.+++++++++.|..++++++||+|++||++|+.|++++...
T Consensus 449 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 525 (542)
T PRK07786 449 EVAVIGRADEKWGEVPVAVAAVRNDDAA--LTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGAC 525 (542)
T ss_pred EEEEEeccCcccCceEEEEEEECCCCCC--CCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhh
Confidence 9999999888778889999988765321 1257899999999999999999999999999999999999999999875
No 54
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-65 Score=565.77 Aligned_cols=520 Identities=21% Similarity=0.292 Sum_probs=421.4
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.++|++.+. .+|+++|+++.+ ..+.+||.||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++
T Consensus 17 ~l~~~l~~~~~-~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 91 (559)
T PRK08315 17 TIGQLLDRTAA-RYPDREALVYRD----QGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKI 91 (559)
T ss_pred cHHHHHHHHHH-HCCCCeEEEEcC----CCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 36688888887 799999998753 3578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhh---------hcCCCccEEEEEecCC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECA---------KSGISVDVCLTYENQS 204 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~vi~~~~~~ 204 (631)
|++++|++|..+.+++..++++++++++++++..... +....+.+....+. ...+..+.++.+....
T Consensus 92 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (559)
T PRK08315 92 GAILVTINPAYRLSELEYALNQSGCKALIAADGFKDS----DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK 167 (559)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCCCEEEEecccccc----chHHHHHHhhhhhhcccccccccccCCCceeEEeecccC
Confidence 9999999999999999999999999999998753211 11111111111110 0002233333332211
Q ss_pred ccccccCcCCCCCccchhhhcccC------CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC
Q 006776 205 AMTRENTKWQDGRDIWWQDVVPKY------PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 278 (631)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~ 278 (631)
. .....|.++.... ...........+++++++|||||||.||+|.++|.+++.+. ......++
T Consensus 168 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~-~~~~~~~~ 236 (559)
T PRK08315 168 H----------PGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNG-YFIGEAMK 236 (559)
T ss_pred C----------cccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHH-HHHHHhcC
Confidence 0 0112233332211 00111223567889999999999999999999999965444 34455678
Q ss_pred CCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccc
Q 006776 279 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 358 (631)
Q Consensus 279 ~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~ 358 (631)
++++|+++...|+.|..|....++.++..|+++++.... +++..+++.++++++|++.++|+++..++.... ...
T Consensus 237 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~--~~~ 311 (559)
T PRK08315 237 LTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEG---FDPLATLAAVEEERCTALYGVPTMFIAELDHPD--FAR 311 (559)
T ss_pred CCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCC---CCHHHHHHHHHHcCCeEEecchHHHHHHHhCcc--cCC
Confidence 999999999999999999878889999999999865432 488999999999999999999999998887543 234
Q ss_pred cCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC-CCCCCCCcCCCcCCCceEEeCCC-
Q 006776 359 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPFFGVQPVIVDEK- 436 (631)
Q Consensus 359 ~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~- 436 (631)
.+++++|.++++|+++++++++.+.+.++ ..++++.||+||++.+++...... ...++.++|+|++++.++|+|++
T Consensus 312 ~~~~~lr~~~~~G~~~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~ 389 (559)
T PRK08315 312 FDLSSLRTGIMAGSPCPIEVMKRVIDKMH--MSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPET 389 (559)
T ss_pred CCchhhheeEecCCCCCHHHHHHHHHHcC--CcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCcc
Confidence 46889999999999999999999999987 356999999999987654332211 12356789999999999999997
Q ss_pred CcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHH
Q 006776 437 GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEV 516 (631)
Q Consensus 437 g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eI 516 (631)
|++++.|+.|||+|++ ++++.|||++++.+...+.. ++||+|||++++++||+++++||.||+||++|++|++.+|
T Consensus 390 ~~~~~~g~~GEl~v~g--~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eI 465 (559)
T PRK08315 390 GETVPRGEQGELCTRG--YSVMKGYWNDPEKTAEAIDA--DGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREI 465 (559)
T ss_pred CCcCCCCCceEEEEEC--chhhhhhcCChhHHhhcCCC--CCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHH
Confidence 9999999999999999 99999999998877665533 7899999999999999999999999999999999999999
Q ss_pred HHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhH
Q 006776 517 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMR 596 (631)
Q Consensus 517 E~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r 596 (631)
|++|.++|+|.+++|++++++..++.++++|+..++...+ .+++++++++.++.+++|..|+++++||+|.+||++|
T Consensus 466 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r 542 (559)
T PRK08315 466 EEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATLT---EEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQK 542 (559)
T ss_pred HHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCCC---HHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeH
Confidence 9999999999999999999887788899999887665444 5688999999999999999999999999999999999
Q ss_pred HHHHHHHhcCc
Q 006776 597 RILRKIASRQL 607 (631)
Q Consensus 597 ~~l~~~~~~~~ 607 (631)
..|++++....
T Consensus 543 ~~L~~~~~~~~ 553 (559)
T PRK08315 543 FKMREMMIEEL 553 (559)
T ss_pred HHHHHHHHhhh
Confidence 99999987653
No 55
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.9e-66 Score=569.03 Aligned_cols=501 Identities=21% Similarity=0.300 Sum_probs=409.0
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.+.+.+++. .+|+++|+++.. ..+.+||.||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++
T Consensus 29 ~~~~~l~~~a~-~~p~~~a~~~~~----~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 103 (546)
T PLN02330 29 TLPDFVLQDAE-LYADKVAFVEAV----TGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAA 103 (546)
T ss_pred cHHHHHhhhhh-cCCCccEEEecC----CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHh
Confidence 35577777777 799999998542 2468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|+++.++.+++.+++++++++++++++..... + ..+ .+ .++++.....
T Consensus 104 G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~---------~----~~~-----~~-~~i~~~~~~~-------- 156 (546)
T PLN02330 104 GGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGK---------V----KGL-----GL-PVIVLGEEKI-------- 156 (546)
T ss_pred CcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhh---------H----hhc-----CC-cEEEecCCCC--------
Confidence 9999999999999999999999999999998764321 1 111 11 1233322110
Q ss_pred CCCCccchhhhcccCCC---CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCC----CCcEEE
Q 006776 214 QDGRDIWWQDVVPKYPT---KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK----PSDVYW 286 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~----~~d~~~ 286 (631)
.....|.+++..... ........++++++|+|||||||.||||+++|++++.+.... .++.. ..++.+
T Consensus 157 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~---~~~~~~~~~~~~~~~ 231 (546)
T PLN02330 157 --EGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSS---LFSVGPEMIGQVVTL 231 (546)
T ss_pred --CCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHH---hhccCccccCceEEE
Confidence 112234444432211 112233457899999999999999999999999966554322 22333 345788
Q ss_pred EecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCC--ce
Q 006776 287 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK--SL 364 (631)
Q Consensus 287 ~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~--~l 364 (631)
...|++|.+|....++.++..|+++++.+. +++..+++.++++++|.+.++|+++..+.+.... .+.+++ ++
T Consensus 232 ~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~--~~~~~~~~~l 305 (546)
T PLN02330 232 GLIPFFHIYGITGICCATLRNKGKVVVMSR----FELRTFLNALITQEVSFAPIVPPIILNLVKNPIV--EEFDLSKLKL 305 (546)
T ss_pred EecChHHHHHHHHHHHHHhhcCCEEEEecc----cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccc--cccccchhee
Confidence 889999998877677888999999998764 4889999999999999999999999999875431 222333 57
Q ss_pred eEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccC-CC--CCCCCCCCcCCCcCCCceEEeC-CCCccc
Q 006776 365 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PG--AWPQKPGSATFPFFGVQPVIVD-EKGVEI 440 (631)
Q Consensus 365 r~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~-~~--~~~~~~~~~G~p~~~~~~~i~d-~~g~~~ 440 (631)
|.++++|+++++++++++.+.++ ++++++.||+||++++..... +. ......+++|.|+++++++|+| ++++++
T Consensus 306 ~~i~~~g~~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~ 383 (546)
T PLN02330 306 QAIMTAAAPLAPELLTAFEAKFP--GVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSL 383 (546)
T ss_pred eeEEEcCCcCCHHHHHHHHHHcC--CCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccC
Confidence 99999999999999999999985 489999999999986543221 11 1113456899999999999999 478899
Q ss_pred CCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHH
Q 006776 441 EGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESAL 520 (631)
Q Consensus 441 ~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l 520 (631)
+.|+.|||+++| |.++.||+++++.+...+. .+|||+|||+|++++||++++.||.||+|+++|++|+|.+||++|
T Consensus 384 p~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~~--~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (546)
T PLN02330 384 PKNTPGELCVRS--QCVMQGYYNNKEETDRTID--EDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAIL 459 (546)
T ss_pred CCCCceEEEEec--chhhhhhccCccchhhhcc--CCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHH
Confidence 999999999999 9999999999887766543 378999999999999999999999999999999999999999999
Q ss_pred hcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 521 VSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 521 ~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
.++|.|.+++|++++++..++.++++|++.++...+ .++|++++++.|+++++|+.++++++||+|++||++|+.|+
T Consensus 460 ~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~ 536 (546)
T PLN02330 460 LTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKES---EEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLK 536 (546)
T ss_pred HhCCchheEEEEeccccccCceeEEEEEECCCCCCC---HHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHH
Confidence 999999999999999988899999999988765444 56799999999999999999999999999999999999999
Q ss_pred HHHhcC
Q 006776 601 KIASRQ 606 (631)
Q Consensus 601 ~~~~~~ 606 (631)
+++...
T Consensus 537 ~~~~~~ 542 (546)
T PLN02330 537 EKMLSI 542 (546)
T ss_pred HHHHhh
Confidence 999764
No 56
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.7e-66 Score=626.93 Aligned_cols=525 Identities=20% Similarity=0.214 Sum_probs=407.8
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCC---CCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLA 129 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~---~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA 129 (631)
.++++++++++. .+|+++|+++.... .+..+++||+||.+++.++|++|.+.|+++||+|+++++|++++++++||
T Consensus 236 ~~l~~~~~~~a~-~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 236 GAIHDIFADNAE-KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred CcHHHHHHHHHH-hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 357789999998 79999999864221 02357899999999999999999999999999999999999999999999
Q ss_pred HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccc
Q 006776 130 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE 209 (631)
Q Consensus 130 ~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 209 (631)
|+++|++++|++|.++.+++.+++++++++++++.+.... +...+.............+..+. +.......
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 385 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGT------LDQLVRDYIDKELELRTEIPALA-LQDDGSLV-- 385 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccc------cchhhhhhhhcccccccccceEE-eccccccc--
Confidence 9999999999999999999999999999999998764211 00111111110000001111111 11100000
Q ss_pred cCcCCCCCccchhhhcccC---CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEE
Q 006776 210 NTKWQDGRDIWWQDVVPKY---PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYW 286 (631)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~ 286 (631)
.... .....+..... ..........++++++|+|||||||.||||+++|++++.. .......+++.++|+++
T Consensus 386 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~~ 460 (1389)
T TIGR03443 386 GGSL----EGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYY-FPWMAKRFGLSENDKFT 460 (1389)
T ss_pred cccc----ccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHH-HHHHHHhcCCCCCCEEE
Confidence 0000 00000000000 0001112346789999999999999999999999995444 44445578899999999
Q ss_pred EecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeE
Q 006776 287 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRV 366 (631)
Q Consensus 287 ~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~ 366 (631)
+.++++|..+. ..++.+|+.|+++++.+.. ...++..+++.|+++++|+++++|++++.|..... ..+++||.
T Consensus 461 ~~~~~~~d~~~-~~i~~~L~~G~~l~~~~~~-~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-----~~~~~lr~ 533 (1389)
T TIGR03443 461 MLSGIAHDPIQ-RDMFTPLFLGAQLLVPTAD-DIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT-----TPIPSLHH 533 (1389)
T ss_pred EecCceecchH-HHHHHHHhCCCEEEEcChh-hccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc-----ccCCCccE
Confidence 99999998775 6789999999999997643 23478899999999999999999999998875432 25789999
Q ss_pred EEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC---------CCCCCCCcCCCcCCCceEEeCCC-
Q 006776 367 LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---------WPQKPGSATFPFFGVQPVIVDEK- 436 (631)
Q Consensus 367 v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~---------~~~~~~~~G~p~~~~~~~i~d~~- 436 (631)
+++|||++++...+++.+..+ +++++|.||+||++..++...... ......++|+|+++++++|+|++
T Consensus 534 ~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~ 611 (1389)
T TIGR03443 534 AFFVGDILTKRDCLRLQTLAE--NVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRND 611 (1389)
T ss_pred EEEecccCCHHHHHHHHHhCC--CCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCcc
Confidence 999999999999999888765 489999999999986554321110 01124578999999999999974
Q ss_pred -CcccCCCcceeEEEecCCCcccccccCCchhhhhhccc--------------------------cCCCeEecCceEEEc
Q 006776 437 -GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK--------------------------PFPGYYFTGDGCSRD 489 (631)
Q Consensus 437 -g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~--------------------------~~~g~~~TGDl~~~~ 489 (631)
+++++.|+.|||+|+| |+++.|||++++.+.+.|.. ..+|||+|||+|+++
T Consensus 612 ~~~~~~~G~~GEL~i~G--~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~ 689 (1389)
T TIGR03443 612 RTQTCGVGEVGEIYVRA--GGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYL 689 (1389)
T ss_pred CCCcCCCCCceEEEecc--cccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEc
Confidence 5789999999999999 99999999999988777642 125799999999999
Q ss_pred cCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCC-CC-------------
Q 006776 490 KDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV-PY------------- 555 (631)
Q Consensus 490 ~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~-~~------------- 555 (631)
+||+++|+||.||+||++|+||+|.|||++|.+||.|.+++|++.+++..++.+++||++..+. ..
T Consensus 690 ~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~ 769 (1389)
T TIGR03443 690 PDGNVECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESS 769 (1389)
T ss_pred CCCCEEEecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCcccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999998887788999999876321 10
Q ss_pred ---------cHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHH
Q 006776 556 ---------SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 603 (631)
Q Consensus 556 ---------~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~ 603 (631)
..+..++|+++++++|+.|++|..++++++||+|++||++|++|++.+
T Consensus 770 ~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~~ 826 (1389)
T TIGR03443 770 DPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFPD 826 (1389)
T ss_pred ccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCCc
Confidence 012357899999999999999999999999999999999999997543
No 57
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-66 Score=563.36 Aligned_cols=492 Identities=23% Similarity=0.333 Sum_probs=396.6
Q ss_pred hhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEec
Q 006776 61 RNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 140 (631)
Q Consensus 61 ~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l 140 (631)
.++. .+|+++|+++. +..+.+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++++
T Consensus 5 ~~a~-~~p~~~a~~~~----~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 5 THAQ-IAPDRPAVIVA----ETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhh-hCCCCcEEEec----CCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 3455 68999999864 225789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccc
Q 006776 141 FAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIW 220 (631)
Q Consensus 141 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 220 (631)
++.++.+++.+++++++++++++++... ....... ......+.+.... .....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~-------~~~~~~~~~~~~~-----------~~~~~ 132 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALD---------GLAAKVG-------ADLPLRLSFGGEI-----------DGFGS 132 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhh---------hHHHHhh-------hccceEEEecCcc-----------ccccc
Confidence 9999999999999999999999876421 1111110 1111111111100 00111
Q ss_pred hhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEE--cCchHHHHH---HHHHHHhcCCCCCcEEEEecccceec
Q 006776 221 WQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLH--TTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWIT 295 (631)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~--t~~~~l~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~ 295 (631)
+++........ ....+++++|+|||||||.||+|++ +|.++.... .......+++.++++++..+|++|..
T Consensus 133 ~~~~~~~~~~~----~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~ 208 (501)
T PRK13390 133 FEAALAGAGPR----LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAA 208 (501)
T ss_pred HHHHhcccCCC----CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhh
Confidence 22221111100 0122357999999999999999996 455433221 11122356788899999999999998
Q ss_pred chhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCC
Q 006776 296 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPIN 375 (631)
Q Consensus 296 g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~ 375 (631)
++.+. +..+..|+++++.++ +++..+++.|+++++|++.++|+++..|.+.........+++++|.++++|++++
T Consensus 209 ~~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~ 283 (501)
T PRK13390 209 PLRWC-SMVHALGGTVVLAKR----FDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCP 283 (501)
T ss_pred HHHHH-HHHHhcCceEEEcCC----cCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCC
Confidence 76443 345678999988764 4789999999999999999999999999876433233456789999999999999
Q ss_pred HhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCC
Q 006776 376 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP 455 (631)
Q Consensus 376 ~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p 455 (631)
+++.+.+.+.++ .++++.||+||+++++..... .....++++|.|+++ .++|+|++|++++.|+.|||++++ |
T Consensus 284 ~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~Gel~v~~--~ 356 (501)
T PRK13390 284 VDVKHAMIDWLG---PIVYEYYSSTEAHGMTFIDSP-DWLAHPGSVGRSVLG-DLHICDDDGNELPAGRIGTVYFER--D 356 (501)
T ss_pred HHHHHHHHHhcC---CceeeeecccccCceEEecch-hhccCCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEec--C
Confidence 999999999887 689999999999875443221 122456789999999 799999999999999999999999 8
Q ss_pred cccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeee
Q 006776 456 GAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVE 535 (631)
Q Consensus 456 ~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~ 535 (631)
+++.|||++++.+...+....+||++|||+|++|+||++++.||.||+||++|++|+|.+||++|.+||+|.+++|++++
T Consensus 357 ~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~ 436 (501)
T PRK13390 357 RLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVP 436 (501)
T ss_pred CccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEecc
Confidence 99999999999888777655578999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 536 HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 536 ~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
++..++.++++|++.++...+++..++|.++++++|+.+++|..++++++||+|++||++|++||
T Consensus 437 ~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 437 DPEMGEQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred CcccCceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 98888999999998876555555678899999999999999999999999999999999999875
No 58
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.2e-66 Score=558.59 Aligned_cols=482 Identities=22% Similarity=0.346 Sum_probs=396.9
Q ss_pred hhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEe
Q 006776 60 DRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSV 139 (631)
Q Consensus 60 ~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~ 139 (631)
+.++. .+|+++|++... ....+||.||.+.+.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 2 ~~~a~-~~p~~~a~~~~~----~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 76 (488)
T PRK09088 2 AFHAR-LQPQRLAAVDLA----LGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVP 76 (488)
T ss_pred chhhh-hCCCceEEEecC----CCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEe
Confidence 34555 689999987532 2478999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCcc
Q 006776 140 VFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDI 219 (631)
Q Consensus 140 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 219 (631)
+++.++.+++.+++++++++++|+++....... . .+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~--------------------~---~~~~~~----------------- 116 (488)
T PRK09088 77 LNWRLSASELDALLQDAEPRLLLGDDAVAAGRT--------------------D---VEDLAA----------------- 116 (488)
T ss_pred eCccCCHHHHHHHHHhCCCCEEEEcchhhcccc--------------------c---ccchhh-----------------
Confidence 999999999999999999999998764321100 0 000000
Q ss_pred chhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhH
Q 006776 220 WWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSY 299 (631)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~ 299 (631)
+.+....... ........+++++++|||||||.||+|+++|++++. ....+.....+.++|++++.+|+.|++|+..
T Consensus 117 -~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~-~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 193 (488)
T PRK09088 117 -FIASADALEP-ADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQ-TAHNFGVLGRVDAHSSFLCDAPMFHIIGLIT 193 (488)
T ss_pred -hhhhcccccc-ccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHH-HHHHHHHhhCCCCCcEEEEecchHHHHHHHH
Confidence 0000000000 011123568899999999999999999999999654 3333444567788999999999999999877
Q ss_pred HHHHhhhcCceEEEecCCCCCCChhHHHHHHH--HhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHh
Q 006776 300 VTYGPMLNGASVVVFEGAPTYPDSGRSWDIVD--KYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPS 377 (631)
Q Consensus 300 ~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~--~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~ 377 (631)
.++.++..|+++++.++ .++..++..+. ++++|.++++|+++..+.+... .....++++|.+++||++++.+
T Consensus 194 ~~~~~l~~g~~~~~~~~----~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~~gG~~~~~~ 267 (488)
T PRK09088 194 SVRPVLAVGGSILVSNG----FEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPG--FDAAALRHLTALFTGGAPHAAE 267 (488)
T ss_pred HHHHHHhcCCEEEEcCC----CCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcC--cCccccccceEEEecCCCCCHH
Confidence 78888999999998764 36778888886 4899999999999999887532 2234578999999999999998
Q ss_pred HHHHHHHHhCCCCcceecccccccccceecccCC-CCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCc
Q 006776 378 AWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP-GAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPG 456 (631)
Q Consensus 378 ~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~-~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~ 456 (631)
..+.+.+. + +++++.||+||++++...... .....+++++|.|+++++++|+|+++++++.|+.|||++++ |+
T Consensus 268 ~~~~~~~~-g---~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~--~~ 341 (488)
T PRK09088 268 DILGWLDD-G---IPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVPGELLLRG--PN 341 (488)
T ss_pred HHHHHHHh-C---CceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCceEEEEEC--Cc
Confidence 88777654 4 789999999999875432211 11123668899999999999999999999999999999999 99
Q ss_pred ccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeec
Q 006776 457 AFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEH 536 (631)
Q Consensus 457 ~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~ 536 (631)
++.||+++++.+...+.. +|||+|||+|+++++|++++.||.||+||.+|.+|+|.+||++|.++|+|.+++|+++++
T Consensus 342 ~~~gY~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~ 419 (488)
T PRK09088 342 LSPGYWRRPQATARAFTG--DGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMAD 419 (488)
T ss_pred cchhhcCChhhhhhhhcC--CCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCC
Confidence 999999999877666543 799999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 537 EVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 537 ~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
+..++..+++|+++++...+ .++++++|++.++++++|..|+++++||+|++||++|+.|++++.+.
T Consensus 420 ~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 420 AQWGEVGYLAIVPADGAPLD---LERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred ccCCceeEEEEEECCCCCCC---HHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 87788889999887665433 57899999999999999999999999999999999999999988753
No 59
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=6.9e-66 Score=561.91 Aligned_cols=504 Identities=24% Similarity=0.317 Sum_probs=414.7
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+++..+++ .+|+++|+.+. .+.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 2 ~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 2 LHHLLEDAAA-RLPDATALVHH------DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred HHHHHHHHHH-HCCCCeEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 4567777777 79999999864 3689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|+++.++.+++..++++++++++|+++... ..+......+ +.+..++.+...... ...
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~~-----~~~ 136 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSERL---------DLLHPALPGC----HDLRTLILVGEPAHA-----SEG 136 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchh---------hhhHhhhhcc----cccceEEEecCcccc-----cCC
Confidence 9999999999999999999999999999976432 1122222222 444555555432210 000
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
......|.++...... ........+++++|+|||||||.||+|+++|.+++.+.. .....+++.++|++++.+|++|+
T Consensus 137 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~-~~~~~~~~~~~d~~l~~~p~~~~ 214 (515)
T TIGR03098 137 GGESPSWPKLLALGDA-DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQ-SVATYLENRPDDRLLAVLPLSFD 214 (515)
T ss_pred ccccccHHHhhccccc-cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHH-HHHHHhCCCcccEEEEECchhhH
Confidence 1123345554432221 122234568899999999999999999999999665444 33446678899999999999999
Q ss_pred cchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCC
Q 006776 295 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 374 (631)
Q Consensus 295 ~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l 374 (631)
.|. ..++.++..|+++++.+. .+++.+++.++++++|++.++|+++..|.+... ...+++++|.++++|+++
T Consensus 215 ~~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~~~l~~~~~~g~~l 286 (515)
T TIGR03098 215 YGF-NQLTTAFYVGATVVLHDY----LLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW---PESAAPSLRYLTNSGGAM 286 (515)
T ss_pred hHH-HHHHHHHHcCCEEEEcCC----CCHHHHHHHHHHcCCceEecChHHHHHHHhccc---CCCCccceEEEEecCCcC
Confidence 886 467899999999998764 488999999999999999999999999987532 123578999999999999
Q ss_pred CHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCC
Q 006776 375 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 454 (631)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~ 454 (631)
++++++.+.+.++ ++.+++.||+||++...... +.....+++++|+|+++++++|+|++|++++.|+.|||+++|
T Consensus 287 ~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g-- 361 (515)
T TIGR03098 287 PRATLSRLRSFLP--NARLFLMYGLTEAFRSTYLP-PEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEEGELVHRG-- 361 (515)
T ss_pred CHHHHHHHHHHCC--CCeEeeeeccccccceEecc-cccccCCCCCcceecCCCEEEEECCCCCCCCCCCceEEEEcC--
Confidence 9999999999986 37899999999998654322 222235678999999999999999999999999999999999
Q ss_pred CcccccccCCchhhhhhcccc---------CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcc
Q 006776 455 PGAFRTLYGDHERYETTYFKP---------FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 525 (631)
Q Consensus 455 p~~~~gy~~~~~~~~~~~~~~---------~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~ 525 (631)
|.++.|||++++.+...+... .++||+|||+|++++||++++.||.||+||.+|.+|+|.+||++|.+||.
T Consensus 362 ~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~ 441 (515)
T TIGR03098 362 ALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGL 441 (515)
T ss_pred chhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCC
Confidence 899999999987665544321 13489999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHH
Q 006776 526 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 601 (631)
Q Consensus 526 V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~ 601 (631)
|.+++|++++++..++.++++++..++...+ .++++++++++|+++++|..++++++||+|.+||++|++|++
T Consensus 442 v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 442 VAEAVAFGVPDPTLGQAIVLVVTPPGGEELD---RAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred eeEEEEEeccCcccCceEEEEEEeCCCCCCC---HHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 9999999999988899999998876554444 578999999999999999999999999999999999999974
No 60
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=8.6e-66 Score=559.47 Aligned_cols=497 Identities=25% Similarity=0.351 Sum_probs=410.1
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+++..++ .+|+++|+.+. ..+.+||.||.+++.++|++|.++|+++||+|+++++|++++++++|||+++|
T Consensus 5 l~~~~~~~~--~~~~~~a~~~~-----~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G 77 (504)
T PRK07514 5 LFDALRAAF--ADRDAPFIETP-----DGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAG 77 (504)
T ss_pred HHHHHHHHh--hCCCCeEEEeC-----CCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 445555555 38999998753 25789999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|+++.++.+++..+++.++++++++++.... .+...... .....++.++....
T Consensus 78 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~-----~~~~~~~~~~~~~~--------- 134 (504)
T PRK07514 78 AVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFA---------WLSKIAAA-----AGAPHVETLDADGT--------- 134 (504)
T ss_pred cEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhH---------HHHHhhhc-----cCCceEEEecCCCc---------
Confidence 99999999999999999999999999999865321 11111111 12222333322110
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
..+.+.....+..........+++++|+|||||||.||+|+++|++++.. .......+++.++|++++.+|+.|.
T Consensus 135 ----~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~-~~~~~~~~~~~~~d~~l~~~p~~~~ 209 (504)
T PRK07514 135 ----GSLLEAAAAAPDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSN-ALTLVDYWRFTPDDVLIHALPIFHT 209 (504)
T ss_pred ----ccHHHhhhhcCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHH-HHHHHHHhCCCCccEEEEecchHHH
Confidence 01111111111122223356789999999999999999999999996554 4444456788999999999999999
Q ss_pred cchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCC
Q 006776 295 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 374 (631)
Q Consensus 295 ~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l 374 (631)
.|+...++.++..|+++++.+. .++..+++.+. ++|++.++|+++..+++... .....++++|.+++||+++
T Consensus 210 ~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gg~~~ 281 (504)
T PRK07514 210 HGLFVATNVALLAGASMIFLPK----FDPDAVLALMP--RATVMMGVPTFYTRLLQEPR--LTREAAAHMRLFISGSAPL 281 (504)
T ss_pred HHHHHHHHHHHhcCcEEEECCC----CCHHHHHHHHH--hheeeecHHHHHHHHHcCCC--CCcccccceeeEEecCCCC
Confidence 9887778899999999999864 37889999984 79999999999999987643 2344678999999999999
Q ss_pred CHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeC-CCCcccCCCcceeEEEecC
Q 006776 375 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGECSGYLCIKSS 453 (631)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~ 453 (631)
++++++++.+.++ .++++.||+||++....... ......+++|.|+++++++|+| +++++++.|+.|||++++
T Consensus 282 ~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~--~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~- 355 (504)
T PRK07514 282 LAETHREFQERTG---HAILERYGMTETNMNTSNPY--DGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKG- 355 (504)
T ss_pred CHHHHHHHHHHhC---CcceeecccccccccccCCc--cccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEec-
Confidence 9999999999987 68999999999986543222 1224567899999999999999 789999999999999999
Q ss_pred CCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEe
Q 006776 454 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVG 533 (631)
Q Consensus 454 ~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~ 533 (631)
|+++.||+++++.+...+.. +|||+|||+++++++|++++.||+||+||++|++|+|.+||++|.++++|.+++|++
T Consensus 356 -~~~~~gy~~~~~~~~~~~~~--~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~ 432 (504)
T PRK07514 356 -PNVFKGYWRMPEKTAEEFRA--DGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIG 432 (504)
T ss_pred -CCccccccCCchhhhhhccc--CCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEe
Confidence 99999999999877766643 689999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 534 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 534 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
++++..++.++++++..++...+ .+++++.++++++++++|..+++++++|+|++||++|+.|++.+.+.
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 433 VPHPDFGEGVTAVVVPKPGAALD---EAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred CCCCCcCceEEEEEEECCCCCCC---HHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 99887888899999987765544 56789999999999999999999999999999999999999988764
No 61
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.4e-66 Score=585.83 Aligned_cols=499 Identities=20% Similarity=0.260 Sum_probs=390.5
Q ss_pred hhhhhhhhhccCCCC-eeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 55 CYNCLDRNIEAGLGD-KVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~-~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
+.++|++++. .+|+ ++|+... ..+.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++
T Consensus 206 ~~~~l~~~~~-~~p~~~~a~~~~-----~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~ 278 (718)
T PRK08043 206 LYEALLSAQY-RYGAGKPCIEDV-----NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLR 278 (718)
T ss_pred HHHHHHHHHH-HhCCCCcceEcC-----CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHc
Confidence 4567777777 6887 5777631 246799999999999999999887 599999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|+++.++.+++.+++++++++++|+++......+...+ ...+ +.+..+ .+..... ....
T Consensus 279 G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~-------~~~~----~~~~~i-~~~~~~~----~~~~ 342 (718)
T PRK08043 279 RRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHL-------PEQL----TQVRWV-YLEDLKD----DVTT 342 (718)
T ss_pred CCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCCh-------hhhh----ccccEE-Ehhhhhh----hcch
Confidence 9999999999999999999999999999997654321110000 0011 122222 2211100 0000
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
. .......+... +. .......++++++|+|||||||.||||+++|++++... ......+++.++|++++.+|++|
T Consensus 343 ~-~~~~~~~~~~~--~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~Pl~h 417 (718)
T PRK08043 343 A-DKLWIFAHLLM--PR-LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANV-EQIKTIADFTPNDRFMSALPLFH 417 (718)
T ss_pred h-HHHHHHHHHhC--Cc-cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHH-HHHHHhhCCCccCeEEEcCcchh
Confidence 0 00000000000 00 01112457899999999999999999999999965444 33445678899999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
.+|+...++.++..|+++++.+.. .++..+++.++++++|++.++|+++..+.+.. ...++++||.+++||++
T Consensus 418 ~~g~~~~~~~~l~~G~~vv~~~~~---~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~----~~~~~~~lr~i~~gg~~ 490 (718)
T PRK08043 418 SFGLTVGLFTPLLTGAEVFLYPSP---LHYRIVPELVYDRNCTVLFGTSTFLGNYARFA----NPYDFARLRYVVAGAEK 490 (718)
T ss_pred hhhhHHHHHHHHHcCCEEEEeCCc---ccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc----CcccccceEEEEEeCcc
Confidence 999877788999999999988642 25677889999999999999999998876642 23467899999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecC
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 453 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~ 453 (631)
+++++.+.+.+.++ +++++.||+||++++.+...+. ..+++++|+|+||++++++|++|. ++.|||+++|
T Consensus 491 l~~~~~~~~~~~~g---~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d~~~~----~~~Gel~v~g- 560 (718)
T PRK08043 491 LQESTKQLWQDKFG---LRILEGYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLSVPGI----EQGGRLQLKG- 560 (718)
T ss_pred CCHHHHHHHHHHcC---CCeecccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEecCCCC----CCceEEEEec-
Confidence 99999999999887 7899999999998766544322 246789999999999999998763 3569999999
Q ss_pred CCcccccccCC--chhhhhhcc-----ccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCccc
Q 006776 454 WPGAFRTLYGD--HERYETTYF-----KPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQC 526 (631)
Q Consensus 454 ~p~~~~gy~~~--~~~~~~~~~-----~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V 526 (631)
|+++.|||++ ++....... ...+|||+|||+|++|+||+++++||+||+||++|++|+|.|||+++.+|+.+
T Consensus 561 -~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~ 639 (718)
T PRK08043 561 -PNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPD 639 (718)
T ss_pred -CCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCcc
Confidence 9999999984 332111000 01268999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhh-cCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 527 AEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 527 ~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
.+++|++.+++..++.++++++ +...+ .++++++++++ |+.|++|+.++++++||+|++||++|+.|++++.+
T Consensus 640 ~~~avv~~~~~~~ge~~v~~~~---~~~~~---~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 640 KQHATAIKSDASKGEALVLFTT---DSELT---REKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred ceEEEEEccCCCCCceEEEEEc---CcccC---HHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhc
Confidence 9999999998888888888764 22233 45789999987 99999999999999999999999999999998865
No 62
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.5e-65 Score=560.40 Aligned_cols=505 Identities=23% Similarity=0.324 Sum_probs=410.3
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.++++++++ |+++|+++. .+.+||.||++++.++|..|.+.|+++||+|+++++|++++++++|||+++
T Consensus 26 ~~~~~~~~~a~---p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~ 96 (536)
T PRK10946 26 PLTDILTRHAA---SDAIAVICG------ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKL 96 (536)
T ss_pred cHHHHHHHhhC---CCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHc
Confidence 36688888763 999999953 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++++.+.....++..+++.++++++++++..... ............. +.++.+++.....
T Consensus 97 G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~----~~~~~~~~l~~~~----~~~~~~~~~~~~~--------- 159 (536)
T PRK10946 97 GVAPVNALFSHQRSELNAYASQIEPALLIADRQHALF----SDDDFLNTLVAEH----SSLRVVLLLNDDG--------- 159 (536)
T ss_pred CeEEecCCccccHHHHHHHHhhcCCCEEEEecccccc----chHHHHHHHHhhC----CCceEEEEecCCC---------
Confidence 9988877777778889999999999999987642110 0011111111112 4444444332211
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
...+.+.........+.....++++++++|||||||.||+|+++|+++..+... ....+++.++|++++.+|+.|
T Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~-~~~~~~~~~~~~~l~~~p~~h 234 (536)
T PRK10946 160 ----EHSLDDAINHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRR-SVEICGFTPQTRYLCALPAAH 234 (536)
T ss_pred ----CccHHHHhhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHH-HHHhcCCCCCceEEEecCccc
Confidence 112222222222222223356789999999999999999999999996655443 445678899999999999999
Q ss_pred ecchhH-HHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 294 ITGHSY-VTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 294 ~~g~~~-~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
.++... .+++++..|+++++... +++..++++++++++|++.++|+++..+++..........++++|.+++||+
T Consensus 235 ~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~ 310 (536)
T PRK10946 235 NYPMSSPGALGVFLAGGTVVLAPD----PSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGA 310 (536)
T ss_pred cccchhhhHHHHhhcCcEEEECCC----CCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCC
Confidence 888653 46788999999998654 4788899999999999999999999999876322223346789999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCc-CCCceEEeCCCCcccCCCcceeEEEe
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPF-FGVQPVIVDEKGVEIEGECSGYLCIK 451 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~-~~~~~~i~d~~g~~~~~g~~Gel~v~ 451 (631)
++++++.+.+.+.++ +++++.||+||++.... ..........+++|+|+ |+..++|+|++|++++.|+.|||+++
T Consensus 311 ~l~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~-~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~Gel~v~ 386 (536)
T PRK10946 311 RLSETLARRIPAELG---CQLQQVFGMAEGLVNYT-RLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEVGRLMTR 386 (536)
T ss_pred CCCHHHHHHHHHhcC---CeEEEeecccccceeee-cCCCccccccccCCcccCCCceEEEECCCCCCCCCCCccEEEEe
Confidence 999999999999887 78999999999654332 11111223567899999 79999999999999999999999999
Q ss_pred cCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEE
Q 006776 452 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 531 (631)
Q Consensus 452 ~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~v 531 (631)
| |.++.|||++++.+...+.. +|||+|||+|++|++|++++.||.+|+|+++|++++|.+||++|.+||+|.+++|
T Consensus 387 g--~~~~~GY~~~~~~t~~~~~~--d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v 462 (536)
T PRK10946 387 G--PYTFRGYYKSPQHNASAFDA--NGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAAL 462 (536)
T ss_pred c--CccchhhcCCcccchhhccc--CCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEE
Confidence 9 99999999998877666543 6899999999999999999999999999999999999999999999999999999
Q ss_pred EeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhh-cCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 532 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 532 v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
++++++..++.++++|+.+++ .+ .+++++++++. +++|++|..+.+++++|+|++||++|+.|++++...
T Consensus 463 ~~~~~~~~g~~~~a~vv~~~~--~~---~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~ 533 (536)
T PRK10946 463 VSMEDELMGEKSCAFLVVKEP--LK---AVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASR 533 (536)
T ss_pred EcCCCcccCceEEEEEEeCCC--CC---HHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhh
Confidence 999998888899999998765 23 56788899876 999999999999999999999999999999988764
No 63
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-65 Score=561.86 Aligned_cols=512 Identities=22% Similarity=0.299 Sum_probs=412.7
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.+++++++. .+|++++++...+ +..+++||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 11 ~~~~~~~~~a~-~~~~~~~~~~~~~--~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~ 87 (542)
T PRK06018 11 LCHRIIDHAAR-IHGNREVVTRSVE--GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGI 87 (542)
T ss_pred CHHHHHHHHHH-hCCCceEEEeecc--CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhc
Confidence 46688888888 7999999985322 33578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++++++.+++..+++.+++++++++.... +.+.+..... +.++.++++....... ..
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~-- 150 (542)
T PRK06018 88 GAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFV---------PILEKIADKL----PSVERYVVLTDAAHMP--QT-- 150 (542)
T ss_pred CeEeeccccccCHHHHHHHHhccCCCEEEEccccH---------HHHHHHHhhC----CCccEEEEeccccccc--cc--
Confidence 99999999999999999999999999999976532 2333333333 4555555543321100 00
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHH-HHHHHHHHhcCCCCCcEEEEecccc
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMV-HTATTFKYAFDYKPSDVYWCTADCG 292 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~-~~~~~~~~~~~~~~~d~~~~~~~~~ 292 (631)
.......|.++...............+++++|+|||||||.||+|+++|++.+. .........++++++|+++...|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 230 (542)
T PRK06018 151 TLKNAVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLF 230 (542)
T ss_pred CccccccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHH
Confidence 001122344444333222223345678899999999999999999999997433 2323334467788999999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|..+.. ..+.++..|+++++.... +++..+++.++++++|++.++|++++.|.+.... ...+++++|.++++|+
T Consensus 231 h~~~~~-~~~~~~~~g~~~v~~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~G~ 304 (542)
T PRK06018 231 HANSWG-IAFSAPSMGTKLVMPGAK---LDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEK--EGLKLPHLKMVVCGGS 304 (542)
T ss_pred HHhhhH-HHHhhhhcCceEEccCcC---CCHHHHHHHHHhcCCceeecCcHHHHHHHhcccc--cCCCcccceEEEEcCC
Confidence 988754 346778899999885432 4788999999999999999999999999876532 2346789999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccC-CCC--------CCCCCCCcCCCcCCCceEEeCCCCcccCCC
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PGA--------WPQKPGSATFPFFGVQPVIVDEKGVEIEGE 443 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~-~~~--------~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g 443 (631)
++++++++++++ ++ +++++.||+||++.+.+... +.. ......++|+|.++++++|+|++|++++.+
T Consensus 305 ~l~~~~~~~~~~-~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~ 380 (542)
T PRK06018 305 AMPRSMIKAFED-MG---VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWD 380 (542)
T ss_pred CCCHHHHHHHHH-hC---CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCC
Confidence 999999999999 76 78999999999997654321 110 001235789999999999999999888753
Q ss_pred --cceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHh
Q 006776 444 --CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALV 521 (631)
Q Consensus 444 --~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~ 521 (631)
..|||+++| |.++.|||++... .+ ..+|||+|||+++++++|++++.||.||+|+++|++|++.|||+++.
T Consensus 381 ~~~~Gel~i~g--~~~~~gy~~~~~~---~~--~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~ 453 (542)
T PRK06018 381 GKTFGRLKVRG--PAVAAAYYRVDGE---IL--DDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAV 453 (542)
T ss_pred CCceeEEEEec--CCcchhhhcCccc---Ee--cCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHH
Confidence 679999999 8999999984321 11 23789999999999999999999999999999999999999999999
Q ss_pred cCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHH
Q 006776 522 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 601 (631)
Q Consensus 522 ~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~ 601 (631)
+||+|.+++|++++++..++.+.++|++.++...+ .++++++++++++++++|..++++++||+|++||++|+.|++
T Consensus 454 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~ 530 (542)
T PRK06018 454 GHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETAT---REEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALRE 530 (542)
T ss_pred hCCcceeEEEEeccCCCcCceeEEEEEeCCCCCCC---HHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHH
Confidence 99999999999999988888999999988776554 567999999999999999999999999999999999999999
Q ss_pred HHhc
Q 006776 602 IASR 605 (631)
Q Consensus 602 ~~~~ 605 (631)
.+.+
T Consensus 531 ~~~~ 534 (542)
T PRK06018 531 QFKD 534 (542)
T ss_pred HHhc
Confidence 9876
No 64
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=7.6e-66 Score=556.83 Aligned_cols=478 Identities=26% Similarity=0.359 Sum_probs=400.3
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+.|.+++. .+|+++|+++. .+.+||.||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 4 ~~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G 76 (483)
T PRK03640 4 MPNWLKQRAF-LTPDRTAIEFE------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLG 76 (483)
T ss_pred HHHHHHHHHH-hCCCceEEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCC
Confidence 4567778887 79999999864 4789999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|+++.++.+++..++++++++++++++..... .. .. .. +
T Consensus 77 ~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~---------~~----~~----~~---~----------------- 119 (483)
T PRK03640 77 AVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAK---------LI----PG----IS---V----------------- 119 (483)
T ss_pred cEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHH---------Hh----hh----cc---c-----------------
Confidence 999999999999999999999999999997643210 00 00 00 0
Q ss_pred CCCccchhhhcccC-CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 215 DGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.+.++.... ...........+++++++|||||||.||+|+++|.+++....... ..+++.++|++++.+|++|
T Consensus 120 -----~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~-~~~~~~~~d~~l~~~p~~~ 193 (483)
T PRK03640 120 -----KFAELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSA-LNLGLTEDDCWLAAVPIFH 193 (483)
T ss_pred -----cHHHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHH-HhcCCCcCcEEEEecCHHH
Confidence 011111000 000111224578999999999999999999999998665544433 3578899999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
+.|+. .++.++..|+++++.+. .++..+++.++++++|++.++|+++..|.+..... ....++|.+++||++
T Consensus 194 ~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~---~~~~~lr~~~~~g~~ 265 (483)
T PRK03640 194 ISGLS-ILMRSVIYGMRVVLVEK----FDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG---TYPSSFRCMLLGGGP 265 (483)
T ss_pred HHHHH-HHHHHHhcCCEEEecCC----CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc---ccCCcceEEEEcCCC
Confidence 98864 46888999999999865 48899999999999999999999999998654321 234689999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecC
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 453 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~ 453 (631)
+++.+.+++.+. + +++++.||+||++..++...+......++++|+|++++++++.|+ +++++.|+.|||+++|
T Consensus 266 ~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~-~~~~~~g~~Gel~v~g- 339 (483)
T PRK03640 266 APKPLLEQCKEK-G---IPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD-GVVVPPFEEGEIVVKG- 339 (483)
T ss_pred CCHHHHHHHHHh-C---CCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecC-CCcCCCCCceEEEEEC-
Confidence 999999888764 4 789999999999865443333223346789999999999999986 4889999999999999
Q ss_pred CCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEe
Q 006776 454 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVG 533 (631)
Q Consensus 454 ~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~ 533 (631)
|+++.||+++++.+...+. +|||+|||++++++||++++.||+||++|++|.+|++.+||+++.++++|.+++|++
T Consensus 340 -~~~~~gy~~~~~~~~~~~~---~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~ 415 (483)
T PRK03640 340 -PNVTKGYLNREDATRETFQ---DGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVG 415 (483)
T ss_pred -cchhhhhcCCHHHHHHHHh---cCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 9999999999887766653 689999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 534 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 534 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
.+++..++.++++++.... .+ .++++++|++.|+++++|..|+++++||+|++||++|+.|++++.+
T Consensus 416 ~~~~~~~~~~~~~~~~~~~--~~---~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 416 VPDDKWGQVPVAFVVKSGE--VT---EEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred CCCcccCCceEEEEEeCCC--CC---HHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 9888778888888886543 23 5678999999999999999999999999999999999999998864
No 65
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3e-66 Score=574.01 Aligned_cols=508 Identities=20% Similarity=0.227 Sum_probs=386.4
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCC---CCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHH
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 131 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~---~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~ 131 (631)
+.+++++++. .+|+++|+++.+.+ .+..+.+||+||.+++.++|++|.+. +++||+|+++++|++++++++|||+
T Consensus 36 ~~~~~~~~~~-~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~~ 113 (612)
T PRK12476 36 LISLIERNIA-NVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAAI 113 (612)
T ss_pred HHHHHHHHHH-hCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHHH
Confidence 4567888887 79999999986421 12346899999999999999999986 9999999999999999999999999
Q ss_pred HhCCEEEec-CCCCC--HHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccc
Q 006776 132 RIGAVHSVV-FAGFS--SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 208 (631)
Q Consensus 132 ~~G~v~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 208 (631)
++|++++|+ ++.++ .+++.+++++++++++|+++... ..+......+. .....+++.++....
T Consensus 114 ~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~~--~~~~~~~i~~~~~~~--- 179 (612)
T PRK12476 114 KAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAA---------EAVEGFLRNLP--RLRRPRVIAIDAIPD--- 179 (612)
T ss_pred HcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHH---------HHHHHHHhhcc--cccCceEEEeccccc---
Confidence 999999999 57766 78999999999999999976432 12222211110 001123333321100
Q ss_pred ccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC-CCCCcEEEE
Q 006776 209 ENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-YKPSDVYWC 287 (631)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~-~~~~d~~~~ 287 (631)
............++++++|+|||||||.||||+++|++++.+... ....++ +.+++++++
T Consensus 180 ------------------~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~-~~~~~~~~~~~~~~l~ 240 (612)
T PRK12476 180 ------------------SAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQ-MILSIDLLDRNTHGVS 240 (612)
T ss_pred ------------------cccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHH-HHHHhccCCCCceEEE
Confidence 000011112245789999999999999999999999996554433 233456 688899999
Q ss_pred ecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHH--HhCCcEEeecHHHHHHHHhcCC--ccccccCCCc
Q 006776 288 TADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVD--KYKVTIFYTAPTLVRSLMRDGN--EYVTRYSRKS 363 (631)
Q Consensus 288 ~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~--~~~vt~l~~~P~~l~~l~~~~~--~~~~~~~l~~ 363 (631)
.+|++|..|.... +.+++.|+++++........++..+++.++ +++++.+..+|+++..++.... ......++++
T Consensus 241 ~~Pl~h~~g~~~~-~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~ 319 (612)
T PRK12476 241 WLPLYHDMGLSMI-GFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSN 319 (612)
T ss_pred eCCcccccchHHH-HHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhH
Confidence 9999999997544 444556666666543222237889999995 5899999999999888876421 1112446889
Q ss_pred eeEEEEccCCCCHhHHHHHHHHhCC---CCcceecccccccccceecccCCCCC-------------------------C
Q 006776 364 LRVLGSVGEPINPSAWRWFFNVVGD---SRCPISDTWWQTETGGFMITPLPGAW-------------------------P 415 (631)
Q Consensus 364 lr~v~~~Ge~l~~~~~~~~~~~~~~---~~~~i~~~yg~tE~g~~~~~~~~~~~-------------------------~ 415 (631)
+| +++||+++++++.+++.+.++. ....+++.||+||++..++...+... .
T Consensus 320 lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 398 (612)
T PRK12476 320 VV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNA 398 (612)
T ss_pred he-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCc
Confidence 99 9999999999999999998842 23459999999998865443221100 0
Q ss_pred CCCCCcCCCcCCCceEEeCCC-CcccCCCcceeEEEecCCCcccccccCCchhhhhhccc----------------cCCC
Q 006776 416 QKPGSATFPFFGVQPVIVDEK-GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----------------PFPG 478 (631)
Q Consensus 416 ~~~~~~G~p~~~~~~~i~d~~-g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~----------------~~~g 478 (631)
...+++|+|++|++++|+|++ |++++.|+.|||+++| |+++.|||++++.+...|.. ..++
T Consensus 399 ~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g--~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~ 476 (612)
T PRK12476 399 VAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHG--DNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGT 476 (612)
T ss_pred ceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcC--CcccccccCChHHHHHHHhhhhccccccccccccccCCCC
Confidence 123588999999999999987 9999999999999999 99999999999988877642 1235
Q ss_pred eEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhc-Ccccce--EEEEeeecCCCCeeEEEEEEeCCCCC-
Q 006776 479 YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVS-HPQCAE--AAVVGVEHEVKGQGIYAFVTLVEGVP- 554 (631)
Q Consensus 479 ~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~-~~~V~~--~~vv~~~~~~~~~~~~~~v~~~~~~~- 554 (631)
||+|||+|++ +||+++|+||+||+||++|++|+|.|||++|.+ ||.|.+ ++|++++++. ++.++++|+++++..
T Consensus 477 w~~TGDlg~~-~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~ 554 (612)
T PRK12476 477 WLRTGDLGVY-LDGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSR 554 (612)
T ss_pred eeecccccee-ECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCccc
Confidence 9999999998 499999999999999999999999999999985 899999 7778888876 788999999887642
Q ss_pred CcHHHHHHHHHHHHhhcC-CCcc-CceEEECC--CCCCCCCchhhHHHHHHHHhcC
Q 006776 555 YSEELRKSLVLAVRKQIG-AFAA-PDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 555 ~~~~~~~~i~~~~~~~l~-~~~~-p~~i~~v~--~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
.+ .++|.++|++.+. .+++ |+.+.+++ +||+|++||++|+.|++.+.+.
T Consensus 555 ~~---~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~ 607 (612)
T PRK12476 555 AD---PAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDG 607 (612)
T ss_pred cc---HHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcC
Confidence 22 3445555555554 2566 67888887 6999999999999999998653
No 66
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.1e-65 Score=563.10 Aligned_cols=511 Identities=21% Similarity=0.299 Sum_probs=394.6
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
...+|++++. .+|+++|+++. ..++||+||.++++++|++|.++|+++||+|+|+++|++++++++|||+++|
T Consensus 16 ~~~~l~~~~~-~~p~~~Al~~~------~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G 88 (579)
T PLN03102 16 PITFLKRASE-CYPNRTSIIYG------KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAG 88 (579)
T ss_pred HHHHHHHHHH-hCCCCeEEEEC------CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence 4567888887 79999999864 3589999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhh--cCCCccEEEEEecCCccccccCc
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK--SGISVDVCLTYENQSAMTRENTK 212 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vi~~~~~~~~~~~~~~ 212 (631)
++++|+++.++.+++.++|+.++++++|+++... ..+.++...+.. ....+ .++.++..... ..
T Consensus 89 ~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~- 154 (579)
T PLN03102 89 AVLNPINTRLDATSIAAILRHAKPKILFVDRSFE---------PLAREVLHLLSSEDSNLNL-PVIFIHEIDFP---KR- 154 (579)
T ss_pred cEEeeccccCCHHHHHHHHhccCCeEEEEChhhH---------HHHHHHHhhccccccccCc-eEEEecccccc---cC-
Confidence 9999999999999999999999999999976532 222222222210 00112 23333321100 00
Q ss_pred CCCCCccchhhhcccCCCCC-----CceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEE
Q 006776 213 WQDGRDIWWQDVVPKYPTKC-----EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWC 287 (631)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~ 287 (631)
.......|.++........ ......++++++|+|||||||.||+|+++|++++..... ......+...+++++
T Consensus 155 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~l~ 232 (579)
T PLN03102 155 -PSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLS-AIIGWEMGTCPVYLW 232 (579)
T ss_pred -CcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHH-HHhhcCCCCCCeEEe
Confidence 0001223444432221110 012245789999999999999999999999985444332 223445677788999
Q ss_pred ecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEE
Q 006776 288 TADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVL 367 (631)
Q Consensus 288 ~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v 367 (631)
.+|++|..|.. ..+.++..|+++++... +++..+++.|+++++|++.++|+++..|.+.... ....+++++.+
T Consensus 233 ~~pl~h~~g~~-~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~~~~~ 305 (579)
T PLN03102 233 TLPMFHCNGWT-FTWGTAARGGTSVCMRH----VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSL--DLSPRSGPVHV 305 (579)
T ss_pred cCChhhhcchh-HHHHHHHhcCcEEeecc----CChHHHHHHHHHcCCeEEEeChHHHHHHHhCccc--ccCCcccceEE
Confidence 99999998864 45677889999988764 3678899999999999999999999999876421 22345678889
Q ss_pred EEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC------------CCCCCCCcCCCcCCCceEEeCC
Q 006776 368 GSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA------------WPQKPGSATFPFFGVQPVIVDE 435 (631)
Q Consensus 368 ~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~------------~~~~~~~~G~p~~~~~~~i~d~ 435 (631)
++||+++++.+.+++.+ +| +++++.||+||+++.++...... .....+..+.+++ .++++|+
T Consensus 306 ~~gg~~~~~~~~~~~~~-~g---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~ 379 (579)
T PLN03102 306 LTGGSPPPAALVKKVQR-LG---FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNK 379 (579)
T ss_pred EECCCCCCHHHHHHHHH-cC---CeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEecc
Confidence 99999999999988865 55 78999999999986543221100 0011233333443 4556664
Q ss_pred -CCcccCC--CcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeec
Q 006776 436 -KGVEIEG--ECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIG 512 (631)
Q Consensus 436 -~g~~~~~--g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~ 512 (631)
.+++++. ++.|||+++| |+++.|||++++.+...|. +|||+|||+|++|+||++++.||.||+||++|++|+
T Consensus 380 ~~~~~v~~~~~~~GEl~v~g--~~~~~GY~~~~~~t~~~f~---~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~ 454 (579)
T PLN03102 380 ETQESVPRDGKTMGEIVIKG--SSIMKGYLKNPKATSEAFK---HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENIS 454 (579)
T ss_pred ccccccCCCCCCceEEEEEC--cchhhhhcCChhhhHhhhc---cCceecCceEEEcCCCeEEEEeccCcEEEECCEEEC
Confidence 5666654 3679999999 9999999999988776653 689999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHH-------HHHHHHHHHHhhcCCCccCceEEECCC
Q 006776 513 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEE-------LRKSLVLAVRKQIGAFAAPDKIHWAPG 585 (631)
Q Consensus 513 ~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~~~i~~~~~~~l~~~~~p~~i~~v~~ 585 (631)
|.|||++|.+||.|.+++|++++++..++.++++|++.++....+. ...+++++++++|++|++|..++++++
T Consensus 455 p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~ 534 (579)
T PLN03102 455 SVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQE 534 (579)
T ss_pred HHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEccc
Confidence 9999999999999999999999999888999999998765432110 146799999999999999999999999
Q ss_pred CCCCCCchhhHHHHHHHHhcC
Q 006776 586 LPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 586 lP~t~sGKi~r~~l~~~~~~~ 606 (631)
||+|++||++|+.|++++++.
T Consensus 535 ~P~t~~gKi~r~~L~~~~~~~ 555 (579)
T PLN03102 535 LPKNGNGKILKPKLRDIAKGL 555 (579)
T ss_pred CCCCCcccccHHHHHHHHHHh
Confidence 999999999999999998764
No 67
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-65 Score=559.03 Aligned_cols=487 Identities=23% Similarity=0.301 Sum_probs=390.7
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCC-CCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGV-KKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv-~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
+..+|..+ ..|+++|+++. ...+||.||.+++.++|..|.+.|+ ++||+|+++++|+++++++++||+++
T Consensus 5 ~~~~l~~~---~~p~~~Al~~~------~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~ 75 (540)
T PRK13388 5 IAQLLRDR---AGDDTIAVRYG------DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALG 75 (540)
T ss_pred HHHHHHhh---ccCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhC
Confidence 44556554 36899999863 4689999999999999999999999 89999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|.++.+++..++++++++++|+++... ..+.+. .. +.++ ++.+...
T Consensus 76 Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~---------~~~~~~--~~----~~~~-~i~~~~~---------- 129 (540)
T PRK13388 76 GYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHR---------PLLDGL--DL----PGVR-VLDVDTP---------- 129 (540)
T ss_pred CCEEEEecccCChHHHHHHHHhcCCCEEEEChhhh---------HHHHhh--cc----cCce-EEEccch----------
Confidence 99999999999999999999999999999976432 111111 01 2232 2222210
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.|.+++.......+.....++++++|+|||||||.||||+++|++++. ........++++++|+++..+|++|
T Consensus 130 ------~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~d~~l~~~p~~~ 202 (540)
T PRK13388 130 ------AYAELVAAAGALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAF-AGRALTERFGLTRDDVCYVSMPLFH 202 (540)
T ss_pred ------hhhhhhccccCcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHH-HHHHHHHHhCCCCCCEEEEeeCchh
Confidence 122222211111112235679999999999999999999999999554 3344445678999999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..|+...++.++..|+++++.+. +++..+++.++++++|++..+|+.+..++..... .....++++.+ + |++
T Consensus 203 ~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~~~l~~~-~-G~~ 274 (540)
T PRK13388 203 SNAVMAGWAPAVASGAAVALPAK----FSASGFLDDVRRYGATYFNYVGKPLAYILATPER--PDDADNPLRVA-F-GNE 274 (540)
T ss_pred hcchHHHHHHHHHcCcEEEECCC----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCC--ccccccceEEE-E-CCC
Confidence 98876666678999999988654 4788999999999999999999999999876432 11223466643 3 566
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceE-----------EeCCCCcccC-
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV-----------IVDEKGVEIE- 441 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~-----------i~d~~g~~~~- 441 (631)
++++....+.+.++ +++++.||+||++.++... + ...++++|+|++|+++. ++|++|+.+.
T Consensus 275 ~~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~-~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~ 347 (540)
T PRK13388 275 ASPRDIAEFSRRFG---CQVEDGYGSSEGAVIVVRE-P---GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNA 347 (540)
T ss_pred CCHHHHHHHHHHhC---CceecccccccccceeecC-C---CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccC
Confidence 78888888888886 7899999999998765432 1 13567899999997652 4556666653
Q ss_pred CCcceeEEEe-cCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHH
Q 006776 442 GECSGYLCIK-SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESAL 520 (631)
Q Consensus 442 ~g~~Gel~v~-~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l 520 (631)
++..|||+++ | |+++.|||++++.+...+. +|||+|||+|++|+||+++++||+||+||++|++|+|.+||++|
T Consensus 348 ~~~~GEl~v~~g--~~~~~gY~~~~~~t~~~~~---~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l 422 (540)
T PRK13388 348 DEAIGELVNTAG--AGFFEGYYNNPEATAERMR---HGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERIL 422 (540)
T ss_pred CCcceEEEEecC--CcccccccCChHHHHHHhh---cCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHH
Confidence 4678999998 8 9999999999988776653 68999999999999999999999999999999999999999999
Q ss_pred hcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHh--hcCCCccCceEEECCCCCCCCCchhhHHH
Q 006776 521 VSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK--QIGAFAAPDKIHWAPGLPKTRSGKIMRRI 598 (631)
Q Consensus 521 ~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~--~l~~~~~p~~i~~v~~lP~t~sGKi~r~~ 598 (631)
.+||+|.+|+|++++++..|+.+++++++.++...+ .++++++++. .|+++++|..++++++||+|++||++|+.
T Consensus 423 ~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~ 499 (540)
T PRK13388 423 LRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFD---PDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRE 499 (540)
T ss_pred HhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCC---HHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHh
Confidence 999999999999999988888889999887765554 4567778875 49999999999999999999999999999
Q ss_pred HHHHHhcC
Q 006776 599 LRKIASRQ 606 (631)
Q Consensus 599 l~~~~~~~ 606 (631)
|++...+.
T Consensus 500 L~~~~~~~ 507 (540)
T PRK13388 500 LIAQGWAT 507 (540)
T ss_pred HHHhccCC
Confidence 99987654
No 68
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-65 Score=562.25 Aligned_cols=522 Identities=23% Similarity=0.321 Sum_probs=415.1
Q ss_pred cccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHH
Q 006776 45 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 124 (631)
Q Consensus 45 ~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~ 124 (631)
-||+++..++. ++|++++. .+|+++|+.+. .+.+||.||.+++.++|.+|.+.|+++||+|+++++|+++++
T Consensus 26 ~~~~~~~~~l~-~~l~~~a~-~~p~~~al~~~------~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~ 97 (567)
T PRK06178 26 PEYPHGERPLT-EYLRAWAR-ERPQRPAIIFY------GHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH 97 (567)
T ss_pred CCCCcCcccHH-HHHHHHHH-HCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH
Confidence 58888887755 56677776 69999999864 368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCC
Q 006776 125 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 204 (631)
Q Consensus 125 v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 204 (631)
++++||+++|++++|++|.++.+++.+++++++++++++++... +.+...... ..++.+++.....
T Consensus 98 ~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~l~~~~~~-----~~~~~i~~~~~~~ 163 (567)
T PRK06178 98 IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA---------PVVEQVRAE-----TSLRHVIVTSLAD 163 (567)
T ss_pred HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHHHhhcc-----CCcceEEEecccc
Confidence 99999999999999999999999999999999999999976532 222222111 2334443322111
Q ss_pred ccccc-cCcCCC----C--Cccchhhhccc---CCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHH
Q 006776 205 AMTRE-NTKWQD----G--RDIWWQDVVPK---YPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK 274 (631)
Q Consensus 205 ~~~~~-~~~~~~----~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~ 274 (631)
..... ...... . ....+.++.+. .+.........++++++|+|||||||.||+|+++|++++.+......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~ 243 (567)
T PRK06178 164 VLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYA 243 (567)
T ss_pred ccccccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHH
Confidence 00000 000000 0 00011111111 11111223356799999999999999999999999997665554444
Q ss_pred HhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCc
Q 006776 275 YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 354 (631)
Q Consensus 275 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~ 354 (631)
....+.++++++..+|++|++|....++.++..|+++++.++ +++..+++.++++++|.+..+|..+..+.+...
T Consensus 244 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~- 318 (567)
T PRK06178 244 VAVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLAR----WDAVAFMAAVERYRVTRTVMLVDNAVELMDHPR- 318 (567)
T ss_pred HhccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC-
Confidence 446778899999999999999977778889999999999864 489999999999999999999999999887532
Q ss_pred cccccCCCceeEEEE--ccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCC--CC---CCCCCCCcCCCcCC
Q 006776 355 YVTRYSRKSLRVLGS--VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP--GA---WPQKPGSATFPFFG 427 (631)
Q Consensus 355 ~~~~~~l~~lr~v~~--~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~--~~---~~~~~~~~G~p~~~ 427 (631)
....++++++.+.. .|+.+++++++++.+.+|. ..+.+.||+||++........ .. ....++++|+|+||
T Consensus 319 -~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g 395 (567)
T PRK06178 319 -FAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGS--VLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPG 395 (567)
T ss_pred -CCCCCcchheeeeeccccccCCHHHHHHHHHHhCC--cccccccccccccccceeccccccCccccccCCcccccccCC
Confidence 23446678887654 4599999999999999872 334457999998865432211 00 12346779999999
Q ss_pred CceEEeC-CCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEec
Q 006776 428 VQPVIVD-EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINV 506 (631)
Q Consensus 428 ~~~~i~d-~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~ 506 (631)
++++++| +++++++.|+.|||+++| |+++.|||++++.+...+. +|||+|||++++++||+++++||++|+|++
T Consensus 396 ~~v~v~d~~~~~~~~~g~~Gel~v~g--~~v~~gY~~~~~~~~~~~~---dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~ 470 (567)
T PRK06178 396 TEFKICDFETGELLPLGAEGEIVVRT--PSLLKGYWNKPEATAEALR---DGWLHTGDIGKIDEQGFLHYLGRRKEMLKV 470 (567)
T ss_pred cEEEEEcCCCCCcCCCCCceEEEEEC--CcccccccCChhhhhhccc---CCceeecceEEEecCCeEEEEecccccEEE
Confidence 9999999 579999999999999999 9999999999887766543 689999999999999999999999999999
Q ss_pred CceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCC
Q 006776 507 SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGL 586 (631)
Q Consensus 507 ~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~l 586 (631)
+|++|+|.+||+++.++++|.+++|++.+++..++.++++|++.++...+ .+++++.++++++.+++|. +++++++
T Consensus 471 ~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~-i~~v~~i 546 (567)
T PRK06178 471 NGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADLT---AAALQAWCRENMAVYKVPE-IRIVDAL 546 (567)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCcCC---HHHHHHHHHhcCcccCCce-EEEeccC
Confidence 99999999999999999999999999999887888999999987765444 5689999999999999996 8889999
Q ss_pred CCCCCchhhHHHHHHHHhc
Q 006776 587 PKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 587 P~t~sGKi~r~~l~~~~~~ 605 (631)
|+|++||++|+.|++++++
T Consensus 547 P~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 547 PMTATGKVRKQDLQALAEE 565 (567)
T ss_pred CCCCccceeHHHHHHHHHh
Confidence 9999999999999998865
No 69
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2e-65 Score=562.72 Aligned_cols=515 Identities=22% Similarity=0.312 Sum_probs=404.6
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~-Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
.+.+.|++++. .+|+++|+++. .+.+||.||.++++++|++|.+. |+++||+|+++++|++++++++|||++
T Consensus 25 ~~~~~l~~~~~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~ 97 (562)
T PRK12492 25 SVVEVFERSCK-KFADRPAFSNL------GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALR 97 (562)
T ss_pred cHHHHHHHHHH-hCCCCeeEecC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 45678888887 79999999853 46899999999999999999884 999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhh----------hcCCCccEEEEEec
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECA----------KSGISVDVCLTYEN 202 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~vi~~~~ 202 (631)
+|++++++++.++.+++.+++++++++++++++..... ......... ...+.++.++....
T Consensus 98 ~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (562)
T PRK12492 98 AGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKL---------VQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTV 168 (562)
T ss_pred cCeEEeccCccCCHHHHHHHHhccCceEEEeccccchH---------HHHhhhccCceEEEeechhhccccccchhcccc
Confidence 99999999999999999999999999999987643211 111110000 00011111100000
Q ss_pred CCccccccCcCCCCCccchhhhcccCC-CCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC---
Q 006776 203 QSAMTRENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD--- 278 (631)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~--- 278 (631)
..................|.+...... ..........+++++|+|||||||.||+|+++|++++.+...... .++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~-~~~~~~ 247 (562)
T PRK12492 169 VDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRA-CLSQLG 247 (562)
T ss_pred cccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHH-HHhccc
Confidence 000000000000011233444432211 111223356789999999999999999999999996544433222 111
Q ss_pred ------CCCC-cEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhc
Q 006776 279 ------YKPS-DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 351 (631)
Q Consensus 279 ------~~~~-d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~ 351 (631)
+..+ ++++..+|+.|++|....++..+..|++.++.... .++..+++.++++++|++.++|+++..|.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 324 (562)
T PRK12492 248 PDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNP---RDIPGFIKELGKWRFSALLGLNTLFVALMDH 324 (562)
T ss_pred ccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCC---cCHHHHHHHHHHhCCceeeCcHHHHHHHHhC
Confidence 2333 46788899999998776677778888887776432 3788899999999999999999999999876
Q ss_pred CCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceE
Q 006776 352 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 431 (631)
Q Consensus 352 ~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 431 (631)
.. ..+.+++++|.+++||+++++++.+++.+.++ +++++.||+||++++.+..... ....++++|+|+++++++
T Consensus 325 ~~--~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~~~v~ 398 (562)
T PRK12492 325 PG--FKDLDFSALKLTNSGGTALVKATAERWEQLTG---CTIVEGYGLTETSPVASTNPYG-ELARLGTVGIPVPGTALK 398 (562)
T ss_pred cC--cccccccceeEEEeccccCCHHHHHHHHHHhC---CceeeccCccccCceeeecCCc-ccccCCccceecCCCEEE
Confidence 43 23456789999999999999999999998886 7899999999998766543322 223567899999999999
Q ss_pred EeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceee
Q 006776 432 IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRI 511 (631)
Q Consensus 432 i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i 511 (631)
|+|+++++++.|+.|||+++| |.++.|||++++.+...+. .+|||+|||+|+++++|++++.||.||+||++|++|
T Consensus 399 ivd~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~--~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i 474 (562)
T PRK12492 399 VIDDDGNELPLGERGELCIKG--PQVMKGYWQQPEATAEALD--AEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNV 474 (562)
T ss_pred EECCCCCCCCCCCceEEEEeC--CccccccccCchhhhhccc--CCCceecCcEEEECCCCeEEEecccCCeEEECCEEE
Confidence 999999999999999999999 8999999999988776653 368999999999999999999999999999999999
Q ss_pred chHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCC
Q 006776 512 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRS 591 (631)
Q Consensus 512 ~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~s 591 (631)
+|.+||++|.+||.|.+++|++.++...++.++++++..+.. .+ .++++++++++|+++++|..++++++||+|.+
T Consensus 475 ~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~---~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~ 550 (562)
T PRK12492 475 YPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPG-LS---VEELKAYCKENFTGYKVPKHIVLRDSLPMTPV 550 (562)
T ss_pred CHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC-CC---HHHHHHHHHHhcccccCCcEEEEeccCCCCCC
Confidence 999999999999999999999999888888899998876432 22 56899999999999999999999999999999
Q ss_pred chhhHHHHHHH
Q 006776 592 GKIMRRILRKI 602 (631)
Q Consensus 592 GKi~r~~l~~~ 602 (631)
||++|+.|+++
T Consensus 551 GK~~r~~L~~~ 561 (562)
T PRK12492 551 GKILRRELRDI 561 (562)
T ss_pred CceeHHHHHhh
Confidence 99999999975
No 70
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-65 Score=555.44 Aligned_cols=500 Identities=23% Similarity=0.292 Sum_probs=412.7
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.+++.++++ .+|+++|+++. .+.+||.||.+.+.++|..|.+.|+++||+|+++++|++++++++|||+++
T Consensus 13 ~~~~~~~~~~~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~ 85 (524)
T PRK06188 13 TYGHLLVSALK-RYPDRPALVLG------DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLA 85 (524)
T ss_pred cHHHHHHHHHH-HCCCCeEEEEC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 35577888887 79999999964 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|+++++++|..+.+++..+++.++++++++++... .....+..... +.+.+++.+.....
T Consensus 86 G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 145 (524)
T PRK06188 86 GLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPF--------VERALALLARV----PSLKHVLTLGPVPD-------- 145 (524)
T ss_pred CCEEEecccCCCHHHHHHHHHhcCceEEEEecchh--------hHHHHHHhhhc----CCceEEEEeCCccc--------
Confidence 99999999999999999999999999999876521 11122222222 34444444332110
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.....+.....+.........++++++|+|||||||.||+|.++|.+++... ......+++..++++++.+|++|
T Consensus 146 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~-~~~~~~~~~~~~~~~l~~~pl~~ 220 (524)
T PRK06188 146 ----GVDLLAAAAKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMA-QIQLAEWEWPADPRFLMCTPLSH 220 (524)
T ss_pred ----hhhHHHhhhccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHH-HHHHhhcCCCcCcEEEEecCchh
Confidence 0000011111111100111235669999999999999999999999955444 44455678889999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..|. .++.+++.|+++++.++ .++..+++.++++++|++.++|+++..+++.... ...+++++|.+++||++
T Consensus 221 ~~g~--~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~~~l~~lr~~~~gg~~ 292 (524)
T PRK06188 221 AGGA--FFLPTLLRGGTVIVLAK----FDPAEVLRAIEEQRITATFLVPTMIYALLDHPDL--RTRDLSSLETVYYGASP 292 (524)
T ss_pred hhhH--HHHHHHHcCCEEEEcCC----CCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCc--cCCCCcceeEEEEcCCC
Confidence 8875 35778999999999865 3789999999999999999999999999987542 23478899999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC----CCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEE
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA----WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLC 449 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~----~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~ 449 (631)
++++..+.+.+.++ ..+++.||+||++..+....... .....+++|+|++|+.++|+|+++++++.|+.|||+
T Consensus 293 ~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~Gel~ 369 (524)
T PRK06188 293 MSPVRLAEAIERFG---PIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEVGEIC 369 (524)
T ss_pred CCHHHHHHHHHHhC---chhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCeeEEE
Confidence 99999999988887 57999999999976554332211 123567899999999999999999999999999999
Q ss_pred EecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceE
Q 006776 450 IKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEA 529 (631)
Q Consensus 450 v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~ 529 (631)
+++ |.++.||+++++.+...+. +|||+|||++++++||++++.||.||+|+++|++|+|.+||++|.+|++|.++
T Consensus 370 v~~--~~~~~gy~~~~~~~~~~~~---~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~ 444 (524)
T PRK06188 370 VRG--PLVMDGYWNRPEETAEAFR---DGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQV 444 (524)
T ss_pred EEC--cchhhhhcCChHHhhhhhc---CCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEE
Confidence 999 9999999999887766552 68999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHh
Q 006776 530 AVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 530 ~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~ 604 (631)
+|++.+++..++.+++++++.+....+ .++|++++++.++++++|..|+++++||+|++||++|+.|++.+.
T Consensus 445 ~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~ 516 (524)
T PRK06188 445 AVIGVPDEKWGEAVTAVVVLRPGAAVD---AAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYW 516 (524)
T ss_pred EEEeccCCCcCceEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHH
Confidence 999999888889999999988655444 678999999999999999999999999999999999999999884
No 71
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.5e-66 Score=562.73 Aligned_cols=494 Identities=19% Similarity=0.191 Sum_probs=373.9
Q ss_pred hhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHH
Q 006776 52 TNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 131 (631)
Q Consensus 52 ~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~ 131 (631)
||-+.+.|++++. .+|+++|+++... +..+++||+||.++++++|++|.++ ++||+|+++++|++++++++|||+
T Consensus 1 ~~~~~~~l~~~~~-~~~~~~a~~~~~~--~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~ 75 (525)
T PRK05851 1 MNELAAALSDAMT-ASGRDLVVLDRES--GLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAW 75 (525)
T ss_pred CchHHHHHHHHhc-CCCCceEEeCCCC--CcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHH
Confidence 4556678888888 7999999986532 2358999999999999999999988 899999999999999999999999
Q ss_pred HhCCEEEecCCC--------CCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecC
Q 006776 132 RIGAVHSVVFAG--------FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQ 203 (631)
Q Consensus 132 ~~G~v~v~l~~~--------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~ 203 (631)
++|++++ +++. ...+++.+++++++++++|+++... ..+... . ..+ .+...
T Consensus 76 ~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~---~----~~~----~~~~~ 134 (525)
T PRK05851 76 LAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHL---------ERLRAV---D----SSV----TVHDL 134 (525)
T ss_pred HcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHH---------HHHHHh---h----ccc----ccccc
Confidence 9999865 4432 2335566789999999999875421 111110 0 100 00000
Q ss_pred CccccccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCC-CC
Q 006776 204 SAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK-PS 282 (631)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~-~~ 282 (631)
. ..... ....+.....++++++|+|||||||.||||+++|++++.+.. .....+++. ++
T Consensus 135 ~------------------~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~-~~~~~~~~~~~~ 194 (525)
T PRK05851 135 A------------------TAAHT-NRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLR-GLNARVGLDAAT 194 (525)
T ss_pred c------------------ccccc-cccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHH-HHHHHhCCCCCC
Confidence 0 00000 000001124578999999999999999999999999655443 344567888 89
Q ss_pred cEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCC
Q 006776 283 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK 362 (631)
Q Consensus 283 d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~ 362 (631)
|++++.+|++|.+|+. .++.+++.|+++++.+......++..+++.++++++|++.+.|.++..+.+.... ....+++
T Consensus 195 d~~l~~~pl~h~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~-~~~~~l~ 272 (525)
T PRK05851 195 DVGCSWLPLYHDMGLA-FLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARR-VSDVDLG 272 (525)
T ss_pred CeEEEcCCCccCccHH-HHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhcc-ccCCCHH
Confidence 9999999999999974 5788999999999975322222577899999999999886655555555443211 2244678
Q ss_pred ceeEEEEccCCCCHhHHHHHHHH---hCCCCcceecccccccccceecccCCCC-------------CCCCCCCcCCCcC
Q 006776 363 SLRVLGSVGEPINPSAWRWFFNV---VGDSRCPISDTWWQTETGGFMITPLPGA-------------WPQKPGSATFPFF 426 (631)
Q Consensus 363 ~lr~v~~~Ge~l~~~~~~~~~~~---~~~~~~~i~~~yg~tE~g~~~~~~~~~~-------------~~~~~~~~G~p~~ 426 (631)
+||.+++||+++++++.+++.+. +|.....+++.||+||++..++...++. ...+.+++|+|++
T Consensus 273 ~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~ 352 (525)
T PRK05851 273 ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIP 352 (525)
T ss_pred HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCC
Confidence 99999999999999999998875 3422245999999999986655332211 0124468999999
Q ss_pred CCceEEeCCCCc-ccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEe
Q 006776 427 GVQPVIVDEKGV-EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 505 (631)
Q Consensus 427 ~~~~~i~d~~g~-~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~ 505 (631)
|++++|+|+++. +++.|+.|||+++| |+++.|||++++.. .+|||+|||+|+++ +|+++++||.||+||
T Consensus 353 g~~v~i~d~~~~~~~~~g~~GEl~v~g--~~~~~GY~~~~~~~-------~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~ 422 (525)
T PRK05851 353 GMEVRISPGDGAAGVAGREIGEIEIRG--ASMMSGYLGQAPID-------PDDWFPTGDLGYLV-DGGLVVCGRAKELIT 422 (525)
T ss_pred CcEEEEECCCCCccCCCCCeEEEEEec--CchhhccccCCccC-------CCCceeccceEEEE-CCEEEEEeecCCEEE
Confidence 999999998764 58889999999999 99999999987521 26899999999996 799999999999999
Q ss_pred cCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECC-
Q 006776 506 VSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP- 584 (631)
Q Consensus 506 ~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~- 584 (631)
++|++|+|.|||++|.+||+|.+++|++++++..++.+.++|+........+++.+++++++...+ +++|+.+++++
T Consensus 423 ~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~l--~~~P~~~~~v~~ 500 (525)
T PRK05851 423 VAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGPDEAGARSEVVQRVASEC--GVVPSDVVFVAP 500 (525)
T ss_pred ECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecCcchHHHHHHHHHHHHHHh--CCCccEEEEECC
Confidence 999999999999999999999999999999888787777776654211112334444555554443 28999999998
Q ss_pred -CCCCCCCchhhHHHHHHHHhc
Q 006776 585 -GLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 585 -~lP~t~sGKi~r~~l~~~~~~ 605 (631)
+||+|++||++|+.|++.+++
T Consensus 501 ~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 501 GSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred CCcCcCcchHHHHHHHHHHHHh
Confidence 899999999999999998864
No 72
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=4e-66 Score=577.42 Aligned_cols=534 Identities=20% Similarity=0.224 Sum_probs=398.4
Q ss_pred hhHhhhhhhhhhccCCCCeeEEEEEc---------CC--------CCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q 006776 52 TNICYNCLDRNIEAGLGDKVAIYWEA---------ND--------PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVI 114 (631)
Q Consensus 52 ~n~~~~~l~~~~~~~~~~~~A~~~~~---------~~--------~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~ 114 (631)
.+++.+++.++++ .+|+++|+.+.. .+ .+....+||+||.+++.++|++|.++|+++||+|+
T Consensus 57 ~~t~~~l~~~~~~-~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Va 135 (696)
T PLN02387 57 ATTLAALFEQSCK-KYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVA 135 (696)
T ss_pred CCCHHHHHHHHHH-HCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 3567789999988 799999996431 00 02345699999999999999999999999999999
Q ss_pred EEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCc
Q 006776 115 IYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISV 194 (631)
Q Consensus 115 i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (631)
|+++|++||++++|||+++|++++|+++.++.+++.++|++++++++|+++... ..+......+ +.+
T Consensus 136 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~---------~~l~~~~~~~----~~l 202 (696)
T PLN02387 136 IFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL---------KKLIDISSQL----ETV 202 (696)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH---------HHHHHHhhcc----CCc
Confidence 999999999999999999999999999999999999999999999999975421 2222222333 567
Q ss_pred cEEEEEecCCccccccC-cCCCCCccchhhhcccCCC-CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHH
Q 006776 195 DVCLTYENQSAMTRENT-KWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT 272 (631)
Q Consensus 195 ~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~ 272 (631)
++++.++.......... .........|+++...... ..+.....++|+++|+|||||||.||||++||++++.+....
T Consensus 203 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~ 282 (696)
T PLN02387 203 KRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGV 282 (696)
T ss_pred eEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHH
Confidence 78887764321000000 0000012235544332211 111223467999999999999999999999999976655544
Q ss_pred HHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCC-----hhHHHHHHHHhCCcEEeecHHHHHH
Q 006776 273 FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPD-----SGRSWDIVDKYKVTIFYTAPTLVRS 347 (631)
Q Consensus 273 ~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~-----~~~~~~~i~~~~vt~l~~~P~~l~~ 347 (631)
.....++.++|++++++|+.|+++.... +..+..|+++.+.... ...+ +..++..+++++||++.++|++++.
T Consensus 283 ~~~~~~~~~~d~~l~~lPl~Hi~~~~~~-~~~~~~g~~i~~g~~~-~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~ 360 (696)
T PLN02387 283 MTVVPKLGKNDVYLAYLPLAHILELAAE-SVMAAVGAAIGYGSPL-TLTDTSNKIKKGTKGDASALKPTLMTAVPAILDR 360 (696)
T ss_pred HhhcCCCCCCCEEEEECcHHHHHHHHHH-HHHHHhCCEEEECChh-hhcccccccccCchhhHHHhCCcEEEehhHHHHH
Confidence 3333467889999999999999987543 3446677776553211 0001 2345678999999999999999999
Q ss_pred HHhcCCcccc-------------------------------c-------------cCC-CceeEEEEccCCCCHhHHHHH
Q 006776 348 LMRDGNEYVT-------------------------------R-------------YSR-KSLRVLGSVGEPINPSAWRWF 382 (631)
Q Consensus 348 l~~~~~~~~~-------------------------------~-------------~~l-~~lr~v~~~Ge~l~~~~~~~~ 382 (631)
|.+....... . ..+ +++|.+++||+++++++.+++
T Consensus 361 l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~ 440 (696)
T PLN02387 361 VRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFI 440 (696)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHH
Confidence 8753110000 0 001 589999999999999998888
Q ss_pred HHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeC-CCCc-cc--CCCcceeEEEecCCCccc
Q 006776 383 FNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGV-EI--EGECSGYLCIKSSWPGAF 458 (631)
Q Consensus 383 ~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~-~~--~~g~~Gel~v~~~~p~~~ 458 (631)
...+| +++++.||+||+++..+...+. ....+++|.|+|+++++|+| +++. .+ .++..|||+|+| |+++
T Consensus 441 ~~~~g---~~v~~~YG~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrG--p~v~ 513 (696)
T PLN02387 441 NICLG---APIGQGYGLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGG--PSVT 513 (696)
T ss_pred HHHcC---CCeeEeechhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEecc--Cccc
Confidence 87887 7899999999998765544332 24678999999999999998 4442 22 233469999999 9999
Q ss_pred ccccCCchhhhhhccccCCC--eEecCceEEEccCCeEEEEeecCCeEec-CceeechHHHHHHHhcCcccceEEEEeee
Q 006776 459 RTLYGDHERYETTYFKPFPG--YYFTGDGCSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVE 535 (631)
Q Consensus 459 ~gy~~~~~~~~~~~~~~~~g--~~~TGDl~~~~~dG~l~i~GR~dd~i~~-~G~~i~~~eIE~~l~~~~~V~~~~vv~~~ 535 (631)
.|||++++.+...|..+.+| ||+|||+|++|+||+++|+||+||+||+ +|++|+|.+||++|.+||.|.+++|+|.+
T Consensus 514 ~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~ 593 (696)
T PLN02387 514 LGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADP 593 (696)
T ss_pred chhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecC
Confidence 99999999998887543345 9999999999999999999999999998 59999999999999999999999999865
Q ss_pred cCCCCeeEEEEEEeCCCC----------C--------CcHHHHHHHHHHHH-----hhcCCCccCceEEECCCCC-----
Q 006776 536 HEVKGQGIYAFVTLVEGV----------P--------YSEELRKSLVLAVR-----KQIGAFAAPDKIHWAPGLP----- 587 (631)
Q Consensus 536 ~~~~~~~~~~~v~~~~~~----------~--------~~~~~~~~i~~~~~-----~~l~~~~~p~~i~~v~~lP----- 587 (631)
. ...++|+|++++.. . .+.++.+++.+.+. .+|..+.+|+.|.++++-.
T Consensus 594 ~---~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g 670 (696)
T PLN02387 594 F---HSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESG 670 (696)
T ss_pred C---cceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCC
Confidence 2 34578888875421 0 01233444444442 3599999999999987543
Q ss_pred -CCCCchhhHHHHHHHHhcCcCCCC
Q 006776 588 -KTRSGKIMRRILRKIASRQLDELG 611 (631)
Q Consensus 588 -~t~sGKi~r~~l~~~~~~~~~~~~ 611 (631)
.|++.|+.|+.+++.|.+++++++
T Consensus 671 ~lT~t~K~~R~~i~~~y~~~i~~ly 695 (696)
T PLN02387 671 LVTAALKLKREQIRKKFKDDLKKLY 695 (696)
T ss_pred cCChhhhhhhHHHHHHHHHHHHHHh
Confidence 577889999999999998876554
No 73
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=6.6e-66 Score=572.25 Aligned_cols=531 Identities=18% Similarity=0.209 Sum_probs=400.4
Q ss_pred CchhHhhhhhhhhhccCCCCeeEEEEEc---CCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHH
Q 006776 50 GITNICYNCLDRNIEAGLGDKVAIYWEA---NDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIA 126 (631)
Q Consensus 50 ~~~n~~~~~l~~~~~~~~~~~~A~~~~~---~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~ 126 (631)
+.++++++++.+++. .+|+++|+.+.. ...+....+||+||.+++.++|++|.++|+++||+|+|+++|++||+++
T Consensus 39 ~~~~t~~~~~~~~~~-~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~ 117 (660)
T PLN02430 39 SDITTAWDIFSKSVE-KYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVA 117 (660)
T ss_pred CCCCCHHHHHHHHHH-hCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Confidence 467889999999988 799999998642 1112345689999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcc
Q 006776 127 MLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAM 206 (631)
Q Consensus 127 ~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 206 (631)
+|||+++|++++|+++.++++++.++|++++++++|+++... ...+....... +.++.++.+......
T Consensus 118 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~--------~~~~~~~~~~~----~~l~~ii~~~~~~~~ 185 (660)
T PLN02430 118 MEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKI--------KELLEPDCKSA----KRLKAIVSFTSVTEE 185 (660)
T ss_pred HHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHH--------HHHHhhhcccC----CCceEEEEECCCChH
Confidence 999999999999999999999999999999999999875321 11111111111 456677666432110
Q ss_pred ccccCcCCCCCccchhhhcccCCC-CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHH----hcCCCC
Q 006776 207 TRENTKWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY----AFDYKP 281 (631)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~----~~~~~~ 281 (631)
..............|+++...... ........++++++|+|||||||.||||++||++++.+....... ..++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~ 265 (660)
T PLN02430 186 ESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTH 265 (660)
T ss_pred HhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCC
Confidence 000000000012345555432211 111223457899999999999999999999999976554432211 125678
Q ss_pred CcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCc------c
Q 006776 282 SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE------Y 355 (631)
Q Consensus 282 ~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~------~ 355 (631)
+|++++.+|++|+++.... +.++..|++++++.+ ++..+++.|++++||++.++|.+++.+.+.... .
T Consensus 266 ~d~~ls~lPl~H~~~~~~~-~~~l~~G~~i~~~~~-----~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~ 339 (660)
T PLN02430 266 DDVYLSFLPLAHILDRMIE-EYFFRKGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNP 339 (660)
T ss_pred CCEEEEeCcHHHHHHHHHH-HHHHHcCCEEEEeCC-----ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCH
Confidence 9999999999999987554 556889999988754 567899999999999999999999887652100 0
Q ss_pred c-----------------------ccc---C----------C-CceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccc
Q 006776 356 V-----------------------TRY---S----------R-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWW 398 (631)
Q Consensus 356 ~-----------------------~~~---~----------l-~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg 398 (631)
. ... + + +++|.+++||+++++++.++++ .++ .+++++.||
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~--~~~i~~~YG 416 (660)
T PLN02430 340 RRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTS--CAFVVQGYG 416 (660)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-Hhc--CCCeeeecc
Confidence 0 000 0 1 5899999999999999866554 444 368999999
Q ss_pred cccccceecccCCCCCCCCCCCcCCCcCCCceEEeC--CCC-cccCCCcceeEEEecCCCcccccccCCchhhhhhcccc
Q 006776 399 QTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD--EKG-VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP 475 (631)
Q Consensus 399 ~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d--~~g-~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~ 475 (631)
+||+++..+.+.+.. ...++++|.|+++++++++| +.| .+++.+..|||+|+| |+++.|||++++.+...+
T Consensus 417 ~TE~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg--~~v~~GY~~~~e~t~~~~--- 490 (660)
T PLN02430 417 LTETLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRG--KCLFSGYYKNPELTEEVM--- 490 (660)
T ss_pred hhhhhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecC--CCccccccCChHHhhhhh---
Confidence 999987665544332 24578999999999999976 333 445556689999999 999999999999887766
Q ss_pred CCCeEecCceEEEccCCeEEEEeecCCeEec-CceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCC-
Q 006776 476 FPGYYFTGDGCSRDKDGYHWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV- 553 (631)
Q Consensus 476 ~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~-~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~- 553 (631)
.+|||+|||+|++|+||+++|+||.||+||+ +|++|+|.+||+++.+||.|.+++|+|. ..++.++|+|++++..
T Consensus 491 ~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~---~~~~~~~A~vv~~~~~~ 567 (660)
T PLN02430 491 KDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGD---SFKSMLVAVVVPNEENT 567 (660)
T ss_pred hccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEec---CCcceEEEEEEcCHHHH
Confidence 2799999999999999999999999999997 5999999999999999999999999983 2357789999876421
Q ss_pred ---------C-------CcHHHHHHHHHHHH-----hhcCCCccCceEEECCC-C-----CCCCCchhhHHHHHHHHhcC
Q 006776 554 ---------P-------YSEELRKSLVLAVR-----KQIGAFAAPDKIHWAPG-L-----PKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 554 ---------~-------~~~~~~~~i~~~~~-----~~l~~~~~p~~i~~v~~-l-----P~t~sGKi~r~~l~~~~~~~ 606 (631)
. ...++.+.|.+.+. ++|+.+.+++.+++.++ + ..|+++|+.|+.+.+.|...
T Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~ 647 (660)
T PLN02430 568 NKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVE 647 (660)
T ss_pred HHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHH
Confidence 0 11223333333332 35999999999888653 2 48999999999999999988
Q ss_pred cCCCC
Q 006776 607 LDELG 611 (631)
Q Consensus 607 ~~~~~ 611 (631)
+++++
T Consensus 648 i~~ly 652 (660)
T PLN02430 648 IDEMY 652 (660)
T ss_pred HHHHH
Confidence 76665
No 74
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-64 Score=555.72 Aligned_cols=515 Identities=22% Similarity=0.338 Sum_probs=409.9
Q ss_pred CchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHH
Q 006776 50 GITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLA 129 (631)
Q Consensus 50 ~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA 129 (631)
...+.+.++|.++++ .+|+++|+++. .+.+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 20 ~~~~~i~~~l~~~a~-~~p~~~a~~~~------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la 92 (557)
T PRK07059 20 SQYPSLADLLEESFR-QYADRPAFICM------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAA 92 (557)
T ss_pred CCCCCHHHHHHHHHH-HcCCCceEEEc------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHH
Confidence 334567788888887 79999999964 46899999999999999999999999999999999999999999999
Q ss_pred HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc--
Q 006776 130 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT-- 207 (631)
Q Consensus 130 ~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-- 207 (631)
|+++|++++|++|.++.+++.++++.++++++|+++... ..+.+.... ...+.+++........
T Consensus 93 ~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 158 (557)
T PRK07059 93 VLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFA---------TTVQQVLAK-----TAVKHVVVASMGDLLGFK 158 (557)
T ss_pred HHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhH---------HHHHHhhcc-----cCCceeEEeccccccccc
Confidence 999999999999999999999999999999999876432 112221111 2233333221110000
Q ss_pred ------------cccCcCCCCCccchhhhcccCC-CCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHH
Q 006776 208 ------------RENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK 274 (631)
Q Consensus 208 ------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~ 274 (631)
.....+.......+.+.+.... .........++++++|+|||||||.||+|+++|++++.+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~ 238 (557)
T PRK07059 159 GHIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEA 238 (557)
T ss_pred ccccccccccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhh
Confidence 0000111122333444333221 112223456789999999999999999999999997654432211
Q ss_pred H---hcCCC---CCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHH
Q 006776 275 Y---AFDYK---PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 348 (631)
Q Consensus 275 ~---~~~~~---~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 348 (631)
. .+... ....+++.+|+.|.+++....+.++..|++.++.++. .++..+++.++++++|.+.++|+++..+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~vt~~~~~p~~~~~l 315 (557)
T PRK07059 239 WLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNP---RDIPGFIKELKKYQVHIFPAVNTLYNAL 315 (557)
T ss_pred hhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCC---cCHHHHHHHHHHhCCeeeecCHHHHHHH
Confidence 1 11111 2346778899999988766667788888888776542 3788899999999999999999999999
Q ss_pred HhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCC
Q 006776 349 MRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGV 428 (631)
Q Consensus 349 ~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~ 428 (631)
..... ....+++++|.++.||+++++.+.+++.+.++ +++++.||+||++.+++.... .....++++|.|++++
T Consensus 316 ~~~~~--~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~p~~g~ 389 (557)
T PRK07059 316 LNNPD--FDKLDFSKLIVANGGGMAVQRPVAERWLEMTG---CPITEGYGLSETSPVATCNPV-DATEFSGTIGLPLPST 389 (557)
T ss_pred HcCcC--cCcCCchhheEEEeccccCCHHHHHHHHHHhC---CCeeeccccccccchhhcCCC-CCCCcCCcccCccCCc
Confidence 87643 23456789999999999999999999999887 789999999999876543322 1223467899999999
Q ss_pred ceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCc
Q 006776 429 QPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSG 508 (631)
Q Consensus 429 ~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G 508 (631)
+++|+|++|++++.|+.|||+++| |.++.|||++++.+...+.. +|||+|||++++++||++++.||++|+|+++|
T Consensus 390 ~v~i~d~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G 465 (557)
T PRK07059 390 EVSIRDDDGNDLPLGEPGEICIRG--PQVMAGYWNRPDETAKVMTA--DGFFRTGDVGVMDERGYTKIVDRKKDMILVSG 465 (557)
T ss_pred EEEEECCCCCCCCCCCceEEEEeC--CccchhhhcCHHHHhhhccc--CCceecCcEEEEcCCCcEEEecccccceEECC
Confidence 999999999999999999999999 99999999999877765543 79999999999999999999999999999999
Q ss_pred eeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCC
Q 006776 509 HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPK 588 (631)
Q Consensus 509 ~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~ 588 (631)
++|+|.+||++|.+||+|.+++|++++++..++.++++|+..+.. .+ .+++++++++.++++++|..|++++++|+
T Consensus 466 ~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~-~~---~~~l~~~~~~~l~~~~~P~~i~~v~~~P~ 541 (557)
T PRK07059 466 FNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPA-LT---EEDVKAFCKERLTNYKRPKFVEFRTELPK 541 (557)
T ss_pred EEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCC-CC---HHHHHHHHHHhcccccCCcEEEEeccCCC
Confidence 999999999999999999999999999988889999998876432 22 46788999999999999999999999999
Q ss_pred CCCchhhHHHHHHH
Q 006776 589 TRSGKIMRRILRKI 602 (631)
Q Consensus 589 t~sGKi~r~~l~~~ 602 (631)
|.+||++|+.|+++
T Consensus 542 t~~GK~~r~~L~~~ 555 (557)
T PRK07059 542 TNVGKILRRELRDG 555 (557)
T ss_pred CcccceeHHHHHhh
Confidence 99999999999864
No 75
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.6e-65 Score=558.77 Aligned_cols=515 Identities=24% Similarity=0.350 Sum_probs=408.9
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.+++.+++. .+|+++|+++. .+.+||.||++++.++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 25 ~~~~~~~~~a~-~~p~~~a~~~~------~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 97 (563)
T PRK06710 25 PLHKYVEQMAS-RYPEKKALHFL------GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLA 97 (563)
T ss_pred cHHHHHHHHHH-HCCCceEEEec------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 46678888887 79999999964 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc------
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT------ 207 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~------ 207 (631)
|++++|++|.++.+++.++++.++++++++++....... ..... .....+++........
T Consensus 98 G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 163 (563)
T PRK06710 98 GGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVT---------NVQSA-----TKIEHVIVTRIADFLPFPKNLL 163 (563)
T ss_pred CeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhh---------ccchh-----hccceeEEeccccccccccccc
Confidence 999999999999999999999999999999875432110 00000 1122222211000000
Q ss_pred -----ccc----CcCCCCCc-cchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhc
Q 006776 208 -----REN----TKWQDGRD-IWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAF 277 (631)
Q Consensus 208 -----~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~ 277 (631)
... ........ ..|..................+++++++|||||||.||+|.++|++++.+........+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~ 243 (563)
T PRK06710 164 YPFVQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLY 243 (563)
T ss_pred cchhhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhcc
Confidence 000 00000000 01221111111111111123578999999999999999999999996544433333334
Q ss_pred CCCC-CcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccc
Q 006776 278 DYKP-SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV 356 (631)
Q Consensus 278 ~~~~-~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~ 356 (631)
+..+ ++++++.+|++|..|....++.++..|+++++.+. +++..+++.|+++++|++.++|+++..+.+... .
T Consensus 244 ~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~ 317 (563)
T PRK06710 244 NCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPK----FDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPL--L 317 (563)
T ss_pred CCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCC----CCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCc--c
Confidence 4444 45788899999998876667778899999998754 478999999999999999999999999987543 2
Q ss_pred cccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeC-C
Q 006776 357 TRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-E 435 (631)
Q Consensus 357 ~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~ 435 (631)
...+++++|.+++||+++++++.+++.+.++ +++++.||+||++........ .....++++|.|++++.++++| +
T Consensus 318 ~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~~~~ 393 (563)
T PRK06710 318 KEYDISSIRACISGSAPLPVEVQEKFETVTG---GKLVEGYGLTESSPVTHSNFL-WEKRVPGSIGVPWPDTEAMIMSLE 393 (563)
T ss_pred ccCChhhhhheeeCCCcCCHHHHHHHHHhhC---CCEecccccccCccccccCcc-cccccCCccCCCCCCCeEEEEECC
Confidence 2346789999999999999999999999886 789999999999875443221 1123467899999999999998 5
Q ss_pred CCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHH
Q 006776 436 KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAE 515 (631)
Q Consensus 436 ~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~e 515 (631)
++.+++.|+.|||++++ |.++.||+++++.+...+. +|||+|||+++++++|+++++||.||+|+++|.+|+|.+
T Consensus 394 ~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~~~~~~~---~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~e 468 (563)
T PRK06710 394 TGEALPPGEIGEIVVKG--PQIMKGYWNKPEETAAVLQ---DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPRE 468 (563)
T ss_pred CCccCCCCCceEEEEec--CccchhhhCChHHHhhhcc---cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHH
Confidence 78899999999999999 8999999999887765542 789999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhh
Q 006776 516 VESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 595 (631)
Q Consensus 516 IE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~ 595 (631)
||++|.+||.|.+++|++++++..++.++++|+..++...+ .+++++++++.++.+++|..++++++||+|.+||++
T Consensus 469 iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~ 545 (563)
T PRK06710 469 VEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECS---EEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKIL 545 (563)
T ss_pred HHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCCC---HHHHHHHHHHhcccccCCcEEEEcccCCCCccchhh
Confidence 99999999999999999999988889999999988775544 568899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCc
Q 006776 596 RRILRKIASRQL 607 (631)
Q Consensus 596 r~~l~~~~~~~~ 607 (631)
|+.|++++..+.
T Consensus 546 r~~L~~~~~~~~ 557 (563)
T PRK06710 546 RRVLIEEEKRKN 557 (563)
T ss_pred HHHHHHHHhhcC
Confidence 999999988654
No 76
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=9.5e-65 Score=551.02 Aligned_cols=494 Identities=20% Similarity=0.231 Sum_probs=403.3
Q ss_pred hhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCC
Q 006776 56 YNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGA 135 (631)
Q Consensus 56 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~ 135 (631)
.+.|.+++. .+|+++|+.+. .+.+||.||.+++.++|..|.+.|+++||+|+++++|+.++++++|||+++|+
T Consensus 3 ~~~l~~~a~-~~p~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~ 75 (502)
T TIGR01734 3 IEAIQAFAE-TYPQTIAYRYQ------GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGH 75 (502)
T ss_pred HHHHHHHHH-HCCCceEEEcC------CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCC
Confidence 356777777 68999998753 47899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCC
Q 006776 136 VHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQD 215 (631)
Q Consensus 136 v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 215 (631)
+++|+++.++.+++.++++..+++.+++++...... .... ++.+....
T Consensus 76 ~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------------------~~~~-~~~~~~~~----------- 123 (502)
T TIGR01734 76 AYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDA--------------------VGTQ-IITLSALE----------- 123 (502)
T ss_pred EEeCCCCcChHHHHHHHHHhcCCCEEEecccccccc--------------------cCCc-eEEchHhh-----------
Confidence 999999999999999999999999999976532110 0011 11111000
Q ss_pred CCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceec
Q 006776 216 GRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWIT 295 (631)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 295 (631)
................++++++|+|||||||.||+|+++|+++..+.. .....+++..+++++...|++|..
T Consensus 124 -------~~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~~~~ 195 (502)
T TIGR01734 124 -------QAETSGGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTN-WMLADFPLSEGKQFLNQAPFSFDL 195 (502)
T ss_pred -------hhhhhcCCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHH-HHHHhCCCCCCceEEeecCceech
Confidence 000000000001124578899999999999999999999999655444 334457888899999999999988
Q ss_pred chhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCC
Q 006776 296 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPIN 375 (631)
Q Consensus 296 g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~ 375 (631)
+. +.++.++..|+++++.+.... .++..+++.+++++++.+.++|+++..++.... .....+++++.++++|++++
T Consensus 196 ~~-~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~--~~~~~~~~l~~~~~~G~~~~ 271 (502)
T TIGR01734 196 SV-MDLYPCLASGGTLHCLDKDIT-NNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPN--FNQENYPHLTHFLFCGEELP 271 (502)
T ss_pred hH-HHHHHHHHCCCEEEEcCHHHh-cCHHHHHHHHHHcCCeEEEEChhHHHHHHhccc--cccccCCcccEEEEcCCcCC
Confidence 76 567899999999999865322 378899999999999999999999988776532 23446789999999999999
Q ss_pred HhHHHHHHHHhCCCCcceecccccccccceecccCC-CC--CCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEec
Q 006776 376 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP-GA--WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 452 (631)
Q Consensus 376 ~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~-~~--~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~ 452 (631)
+++.+++.+.++ ++++++.||+||+++.+..... .. ......++|.|.++++++|+|+++.+++.|+.|||+++|
T Consensus 272 ~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~Gel~v~g 349 (502)
T TIGR01734 272 VKTAKALLERFP--KATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEKGEIVIVG 349 (502)
T ss_pred HHHHHHHHHHCC--CcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCeeEEEEcc
Confidence 999999999986 4899999999999865443211 11 123345799999999999999999999999999999999
Q ss_pred CCCcccccccCCchhhhhhccc-cCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEE
Q 006776 453 SWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 531 (631)
Q Consensus 453 ~~p~~~~gy~~~~~~~~~~~~~-~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~v 531 (631)
|.++.||+++++.+...+.. ...+||+|||+|++|++ ++++.||.+|+|+++|++|+|.+||+++.++|.|.++++
T Consensus 350 --~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~v 426 (502)
T TIGR01734 350 --PSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVV 426 (502)
T ss_pred --ccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEE
Confidence 99999999999888776643 22469999999999977 999999999999999999999999999999999999999
Q ss_pred Eeee-cCCCCeeEEEEEEeCCCCCCc-HHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 532 VGVE-HEVKGQGIYAFVTLVEGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 532 v~~~-~~~~~~~~~~~v~~~~~~~~~-~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
+++. ....++.++++|+........ .++.+++++.+++.++++++|+.++++++||+|++||++|++|++++++
T Consensus 427 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~~ 502 (502)
T TIGR01734 427 VPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVNG 502 (502)
T ss_pred EEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhcC
Confidence 9976 444678899999887643222 3445889999999999999999999999999999999999999998753
No 77
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2e-64 Score=552.69 Aligned_cols=510 Identities=23% Similarity=0.326 Sum_probs=406.0
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.+++++++. .+|+++|+++. .+.+||.||.++++++|.+|.++|+++||+|+++++|++++++++|||+++
T Consensus 22 ~~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 94 (541)
T TIGR03205 22 TLPDLLSKAAA-DYGPRPALEFR------DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKA 94 (541)
T ss_pred CHHHHHHHHHH-HcCCCceEEEC------CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 57788888887 79999999863 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcc--ccccC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAM--TRENT 211 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~--~~~~~ 211 (631)
|++++|++|.++.+++.++++.++++.+|+++... ....+.++... ..+..+++....... .....
T Consensus 95 G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 162 (541)
T TIGR03205 95 GARVVHLSPLDGERALSHKLSDSGARLLITSDLAA-------LLPMALKFLEK-----GLLDRLIVCEDDNWGKVGTPQA 162 (541)
T ss_pred CeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchh-------hhHHHHHhhhc-----ccceEEEEeccccccccccccc
Confidence 99999999999999999999999999999875311 11111111111 123334433321100 00000
Q ss_pred cC-CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHH----hcCCCCCcEEE
Q 006776 212 KW-QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY----AFDYKPSDVYW 286 (631)
Q Consensus 212 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~----~~~~~~~d~~~ 286 (631)
.. .......|.+++.............++++++++|||||||.||+|+++|+++.......... .......++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 242 (541)
T TIGR03205 163 PIPADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVI 242 (541)
T ss_pred ccCCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEE
Confidence 00 01122334444432221222233567899999999999999999999999965433211110 11223347889
Q ss_pred EecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeE
Q 006776 287 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRV 366 (631)
Q Consensus 287 ~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~ 366 (631)
+..|++|.++....++.++..|+++++... .++..+++.|+++++|++.++|+++..|.+... ....+++++|.
T Consensus 243 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~ 316 (541)
T TIGR03205 243 CVLPLFHIYALTVILLRSLRRGDLISLHQR----FDVAAVFRDIEEKRATVFPGVPTMWIALANDPS--LEKRDLSSLAT 316 (541)
T ss_pred EeccHHHHHHHHHHHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCeEeechHHHHHHHHhCcc--ccccCccccce
Confidence 999999998877778888999999888754 489999999999999999999999999986532 23346789999
Q ss_pred EEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEe--CCCCcccCCCc
Q 006776 367 LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV--DEKGVEIEGEC 444 (631)
Q Consensus 367 v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~--d~~g~~~~~g~ 444 (631)
+++||+++++++.+++.+.++ +++++.||+||++...+..... ....++++|.|++++.++|+ |+++++++.|+
T Consensus 317 i~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~ 392 (541)
T TIGR03205 317 IGSGGAPLPVEVANFFERKTG---LKLKSGWGMTETCSPGTGHPPE-GPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGE 392 (541)
T ss_pred EEEccccCCHHHHHHHHHHhC---CCeecccccccCCcccccCCCC-CCCCCCCcceeccCceeEEEecCCCCccCCCCC
Confidence 999999999999999998886 7899999999998765543221 22456789999999988875 67788999999
Q ss_pred ceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCc
Q 006776 445 SGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHP 524 (631)
Q Consensus 445 ~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~ 524 (631)
.|||++++ |+++.|||++++.+...+. ++||+|||+++++++|+++++||.||+||++|++|+|.+||+++.+|+
T Consensus 393 ~Gel~v~~--~~~~~gy~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~ 467 (541)
T TIGR03205 393 VGELRIRG--PNVTRGYWNRPEESAEAFV---GDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHP 467 (541)
T ss_pred eeEEEEec--CCccccccCChhhhHhhhc---cCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCC
Confidence 99999999 9999999999887776653 689999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEeeecCCCCeeEEEEEEeCCCCC-CcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 525 QCAEAAVVGVEHEVKGQGIYAFVTLVEGVP-YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 525 ~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
+|.+++|++++++..++.+++++++.++.. .+ .++++++++++|+++++|..|+++++||+|++||++|+.||
T Consensus 468 ~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 468 GVQEVIVIGIPDQYRGEAAKAFVKLRPGAKPFS---LDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred CeeeEEEEecCCcccCceEEEEEEECCCCCcCC---HHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 999999999998888889999999876542 23 56789999999999999999999999999999999999874
No 78
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-64 Score=549.30 Aligned_cols=486 Identities=23% Similarity=0.290 Sum_probs=395.3
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~-Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
+..+|++++ .++++|+++. .+.+||.||.+++.++|++|+++ |+++|++|+++++|+++++++++||+++
T Consensus 7 ~~~~l~~~a---~~~~~a~~~~------~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~ 77 (529)
T PRK07867 7 VAELLLPLA---EDDDRGLYFE------DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALS 77 (529)
T ss_pred HHHHHHHhc---ccCCceEEEC------CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 456776665 3688998864 36899999999999999999996 8999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|+++.++.+++.+++++++++++|+++.... .+ ..+. ..+. ++.+..
T Consensus 78 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~---------~~----~~~~---~~~~-~~~~~~----------- 129 (529)
T PRK07867 78 GIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAE---------LL----DGLD---PGVR-VINVDS----------- 129 (529)
T ss_pred CCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHH---------HH----Hhhc---cCce-EEEecc-----------
Confidence 999999999999999999999999999999875421 11 1110 1111 121111
Q ss_pred CCCCccchhhhcccC-CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccc
Q 006776 214 QDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 292 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 292 (631)
..|.+.+... ..........++++++|+|||||||.||+|+++|+++..+ .......+++.++|++++.+|++
T Consensus 130 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~-~~~~~~~~~~~~~d~~l~~~pl~ 203 (529)
T PRK07867 130 -----PAWADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASA-GVMLAQRFGLGPDDVCYVSMPLF 203 (529)
T ss_pred -----ccHHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHH-HHHHHHhhCCCcccEEEEecchh
Confidence 1133322211 1111222356789999999999999999999999996544 33445567889999999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|..+....++.++..|+++++.+. ++++.+++.++++++|++..+|+.+..++...... ....+++|. ++||+
T Consensus 204 ~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~--~~~~~~lr~-~~gg~ 276 (529)
T PRK07867 204 HSNAVMAGWAVALAAGASIALRRK----FSASGFLPDVRRYGATYANYVGKPLSYVLATPERP--DDADNPLRI-VYGNE 276 (529)
T ss_pred HHHHHHHHHHHHHhcCceEEecCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcc--cccccceEE-EecCC
Confidence 999887777788999999998754 48899999999999999999999999988764321 123357885 56888
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeC-CCCcccCCCc-------
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGEC------- 444 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~------- 444 (631)
.+++.. .++.+.+| +++++.||+||++..+.. .+ ...++++|.|+++ ++++| +++.+++.|+
T Consensus 277 ~~~~~~-~~~~~~~g---~~l~~~YG~TE~~~~~~~-~~---~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~ 346 (529)
T PRK07867 277 GAPGDI-ARFARRFG---CVVVDGFGSTEGGVAITR-TP---DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLL 346 (529)
T ss_pred CChHHH-HHHHHHhC---CcEEEeeccccccccccc-CC---CCCCCCcCCCCCC--EEEEECCCCCCCCCCcccccccc
Confidence 887764 66777776 789999999999865432 21 1345789999999 67787 4788888887
Q ss_pred -----ceeEEE-ecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHH
Q 006776 445 -----SGYLCI-KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVES 518 (631)
Q Consensus 445 -----~Gel~v-~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~ 518 (631)
.|||++ ++ |+++.|||++++.+...+. +|||+|||+++++++|++++.||.||+||++|++|+|.|||+
T Consensus 347 ~~~~~~Gel~i~~g--~~~~~gy~~~~~~~~~~~~---~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~ 421 (529)
T PRK07867 347 NADEAIGELVNTAG--PGGFEGYYNDPEADAERMR---GGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIER 421 (529)
T ss_pred ccCCcceEEEEecC--CcccccccCChHhhhhhhc---CCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHH
Confidence 899999 99 9999999999987766552 689999999999999999999999999999999999999999
Q ss_pred HHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhh--cCCCccCceEEECCCCCCCCCchhhH
Q 006776 519 ALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ--IGAFAAPDKIHWAPGLPKTRSGKIMR 596 (631)
Q Consensus 519 ~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~--l~~~~~p~~i~~v~~lP~t~sGKi~r 596 (631)
+|.+||+|.+++|++++++..++.++++|++.++...+ .++++++++++ |+++++|..++++++||+|++||++|
T Consensus 422 ~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r 498 (529)
T PRK07867 422 ILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFD---PDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLK 498 (529)
T ss_pred HHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCC---HHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeH
Confidence 99999999999999999998899999999998776554 56777788765 99999999999999999999999999
Q ss_pred HHHHHHHhcCcC
Q 006776 597 RILRKIASRQLD 608 (631)
Q Consensus 597 ~~l~~~~~~~~~ 608 (631)
+.|+++.....+
T Consensus 499 ~~L~~~~~~~~~ 510 (529)
T PRK07867 499 RQLSAEGVDCAD 510 (529)
T ss_pred HHHHHhcCCCCC
Confidence 999998876543
No 79
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.4e-64 Score=547.15 Aligned_cols=470 Identities=25% Similarity=0.387 Sum_probs=355.7
Q ss_pred ccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccE
Q 006776 117 LPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDV 196 (631)
Q Consensus 117 ~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (631)
+||++++++++|||+++|++++|+++.++.+++.++|++++++++|+++......+.... +..+... ....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~---~~~~~~~-----~~~~- 71 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPL---YSKVVEA-----APAK- 71 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecc---hhhhhhc-----ccce-
Confidence 689999999999999999999999999999999999999999999998653221111111 1111111 1122
Q ss_pred EEEEecCCccccccCcCCCCCccchhhhcccC-------CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHH
Q 006776 197 CLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-------PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT 269 (631)
Q Consensus 197 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~ 269 (631)
.+++....... .... ......|+++.... .........+++++++|+|||||||.||||+++|++++.+.
T Consensus 72 ~i~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~ 148 (499)
T PLN03051 72 AIVLPAAGEPV--AVPL-REQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCA 148 (499)
T ss_pred EEEEeccCccc--CCcc-ccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHH
Confidence 22222111000 0000 01123355443110 00111112356899999999999999999999999966544
Q ss_pred HHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHH
Q 006776 270 ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 349 (631)
Q Consensus 270 ~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 349 (631)
... ...+++.++|++++.+|++|..|. ..++.+++.|+++++.++. +++..+++.|+++++|++.++|+++..|+
T Consensus 149 ~~~-~~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~---~~~~~~~~~i~~~~vt~~~~vP~~~~~l~ 223 (499)
T PLN03051 149 SDG-WAHMDIQPGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGA---PLGRGFGKFVQDAGVTVLGLVPSIVKAWR 223 (499)
T ss_pred HHH-HHhcCCCCCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCC---CCcHHHHHHHHHhCCcEEEeCHHHHHHHH
Confidence 332 345688899999999999999986 5678899999999998643 36788999999999999999999999998
Q ss_pred hcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCc
Q 006776 350 RDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQ 429 (631)
Q Consensus 350 ~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~ 429 (631)
+.........++++||.+++||+++++++.+++.+.++. ++++++.||+||+++..+..... ...+++++|+|.++++
T Consensus 224 ~~~~~~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~p~~~~~ 301 (499)
T PLN03051 224 HTGAFAMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGY-YKPVIEYCGGTELASGYISSTLL-QPQAPGAFSTASLGTR 301 (499)
T ss_pred hcCccccccCCchhheEEEecCCCCCHHHHHHHHHhccc-cceeEeeeccccccceeeccccc-CCCCCccccCCCCCce
Confidence 754211234577899999999999999999888774321 26799999999987544322221 1345688999999999
Q ss_pred eEEeCCCCcccCCC--cceeEEEecCCCcccccccCCchhhhhhcccc-------CCCeEecCceEEEccCCeEEEEeec
Q 006776 430 PVIVDEKGVEIEGE--CSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-------FPGYYFTGDGCSRDKDGYHWLTGRV 500 (631)
Q Consensus 430 ~~i~d~~g~~~~~g--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~-------~~g~~~TGDl~~~~~dG~l~i~GR~ 500 (631)
++|+|++|++++.| +.|||+++||+.+++.|||+++. ...++.. ..+||+|||+|++|+||+++|+||.
T Consensus 302 ~~ivd~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~--~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~ 379 (499)
T PLN03051 302 FVLLNDNGVPYPDDQPCVGEVALAPPMLGASDRLLNADH--DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRA 379 (499)
T ss_pred EEEECCCCCCCCCCCCcceEEEEecCcCCCCccccCCcc--cceeeecCCccccCCcceeecCCeEEECCCCcEEEEecc
Confidence 99999999999987 47999999954455789997653 2233321 1237999999999999999999999
Q ss_pred CCeEecCceeechHHHHHHHhc-CcccceEEEEeeecCCCC-eeEEEEE---EeCCCC-CC-cHHHHHHHHHHHHhhcCC
Q 006776 501 DDVINVSGHRIGTAEVESALVS-HPQCAEAAVVGVEHEVKG-QGIYAFV---TLVEGV-PY-SEELRKSLVLAVRKQIGA 573 (631)
Q Consensus 501 dd~i~~~G~~i~~~eIE~~l~~-~~~V~~~~vv~~~~~~~~-~~~~~~v---~~~~~~-~~-~~~~~~~i~~~~~~~l~~ 573 (631)
||+||++|++|+|.|||++|.+ ||+|.+++|++++++..+ +.++++| +++++. .. .+++.+.++++++++|++
T Consensus 380 ~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~ 459 (499)
T PLN03051 380 DDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNP 459 (499)
T ss_pred CCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999996 999999999999998888 6889998 777654 22 355666777777888988
Q ss_pred CccCceEEECCCCCCCCCchhhHHHHHHHHhcCc
Q 006776 574 FAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 607 (631)
Q Consensus 574 ~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~ 607 (631)
++.|..|+++++||+|++||++|+.||+.+.+..
T Consensus 460 ~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 493 (499)
T PLN03051 460 LFKVSRVKIVPELPRNASNKLLRRVLRDQLKKEL 493 (499)
T ss_pred ccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhh
Confidence 7777789999999999999999999999887653
No 80
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-64 Score=547.90 Aligned_cols=502 Identities=24% Similarity=0.337 Sum_probs=407.1
Q ss_pred hhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEec
Q 006776 61 RNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 140 (631)
Q Consensus 61 ~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l 140 (631)
.+++ .+|+++|+++.. ..+.+||.||.+.+.++|++|.++|+++||+|+++++|+++++++++||+++|++++++
T Consensus 5 ~~a~-~~p~~~a~~~~~----~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 5 IHAQ-TTPDKPAVIMAS----TGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hhHh-hCCCceEEEecC----CCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 3455 689999998753 25679999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccc
Q 006776 141 FAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIW 220 (631)
Q Consensus 141 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 220 (631)
++.++.+++.++++.++++++++++... ..+.+....+ +.+...+.+..... ......
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~---------~~~~~~ 137 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKL---------DVARALLKQC----PGVRHRLVLDGDGE---------LEGFVG 137 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhH---------HHHHHHHhcC----CCceEEEEecCCCC---------Cccccc
Confidence 9999999999999999999999986532 2222222222 33334443322110 001112
Q ss_pred hhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEc--CchHHH--HHHHHHHHhcCCCCCcEEEEecccceecc
Q 006776 221 WQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHT--TGGYMV--HTATTFKYAFDYKPSDVYWCTADCGWITG 296 (631)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t--~~~~l~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~g 296 (631)
+.+.....+.. .....++.++++|||||||.||+|+++ |.+... .........+++.+++++++.+|++|..+
T Consensus 138 ~~~~~~~~~~~---~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~ 214 (511)
T PRK13391 138 YAEAVAGLPAT---PIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAP 214 (511)
T ss_pred HHHHhcCCCCC---CCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHH
Confidence 33322221111 112345678999999999999999965 554321 22223334567788999999999999887
Q ss_pred hhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCH
Q 006776 297 HSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINP 376 (631)
Q Consensus 297 ~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~ 376 (631)
.. ..+.++..|+++++.+. +++..+++.++++++|++.++|+++..+.+.........+++++|.+++||+++++
T Consensus 215 ~~-~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~ 289 (511)
T PRK13391 215 QR-AVMLVIRLGGTVIVMEH----FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPP 289 (511)
T ss_pred HH-HHHHHHHcCceEEECCC----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCH
Confidence 64 45678889999999754 48899999999999999999999999998764433344568899999999999999
Q ss_pred hHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCc
Q 006776 377 SAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPG 456 (631)
Q Consensus 377 ~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~ 456 (631)
++++++.+.++ ..+++.||+||++++...... .....++++|.|+++ .++++|++|.+++.|+.|||++++ +
T Consensus 290 ~~~~~~~~~~g---~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~Gel~~~g--~- 361 (511)
T PRK13391 290 QVKEQMIDWWG---PIIHEYYAATEGLGFTACDSE-EWLAHPGTVGRAMFG-DLHILDDDGAELPPGEPGTIWFEG--G- 361 (511)
T ss_pred HHHHHHHHHcC---CceeeeeccccccceEEecCc-cccccCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEec--C-
Confidence 99999999887 679999999999976543221 123456899999999 699999999999999999999999 7
Q ss_pred ccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeec
Q 006776 457 AFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEH 536 (631)
Q Consensus 457 ~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~ 536 (631)
++.|||++++.+...+... +|||+|||+|+++++|.+++.||.||++|++|++|++.+||++|.+||.|.+++|+++++
T Consensus 362 ~~~gy~~~~~~~~~~~~~~-~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~ 440 (511)
T PRK13391 362 RPFEYLNDPAKTAEARHPD-GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPN 440 (511)
T ss_pred cceEEcCChhHhHHhhccC-CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCC
Confidence 8889999998877766432 589999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 537 EVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 537 ~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
+..++.++++++..++...++.+.++|+++++++++++++|..|.+++++|+|++||++|+.|++.+.++
T Consensus 441 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~~ 510 (511)
T PRK13391 441 EDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWGN 510 (511)
T ss_pred cccCceeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhcc
Confidence 8888999999998776554455678999999999999999999999999999999999999999988753
No 81
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-64 Score=551.61 Aligned_cols=513 Identities=23% Similarity=0.288 Sum_probs=406.3
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.++|++++. .+|+++|++. ..+.+||.||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 11 ~l~~~l~~~a~-~~p~~~a~~~------~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~ 83 (540)
T PRK06164 11 TLASLLDAHAR-ARPDAVALID------EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARL 83 (540)
T ss_pred CHHHHHHHHHH-hCCCCeEEec------CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 35678888887 7999999983 2578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|+++..+.+++.+++++++++++|++++... +++.+.+....... .+.++.++.++.... ..+
T Consensus 84 G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~- 151 (540)
T PRK06164 84 GATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKG----IDFAAILAAVPPDA---LPPLRAIAVVDDAAD----ATP- 151 (540)
T ss_pred CcEEEecCCCCCcHHHHHHHHhcCccEEEEcccccc----ccHHHHhhcccccc---cCCcceEEEeccCcc----cCC-
Confidence 999999999999999999999999999998765421 12222222211110 134455554442110 000
Q ss_pred CCCCccchhhhcccCCC-CC---CceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEec
Q 006776 214 QDGRDIWWQDVVPKYPT-KC---EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 289 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 289 (631)
......+.+....... .. .......+++++++|||||||.||+|+++|.+++.+. ......+++.+++++++.+
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~-~~~~~~~~~~~~~~~l~~~ 229 (540)
T PRK06164 152 -APAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHA-RAIARAYGYDPGAVLLAAL 229 (540)
T ss_pred -CCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHH-HHHHHhcCCCCCCEEEEcC
Confidence 0000011111110000 00 0112346889999999999999999999999965444 3444567888999999999
Q ss_pred ccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEE
Q 006776 290 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGS 369 (631)
Q Consensus 290 ~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~ 369 (631)
|++|.+|. ..++.++..|+++++.+. +++..+++.|+++++|+++++|+++..|.+.. ....++++++.+.+
T Consensus 230 p~~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~---~~~~~~~~l~~~~~ 301 (540)
T PRK06164 230 PFCGVFGF-STLLGALAGGAPLVCEPV----FDAARTARALRRHRVTHTFGNDEMLRRILDTA---GERADFPSARLFGF 301 (540)
T ss_pred CchhHHHH-HHHHHHHhcCceEEecCC----CCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh---cccCCCcceeeeee
Confidence 99999997 568899999999998753 47889999999999999999999999998872 23457889998877
Q ss_pred cc-CCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC-CCCCCCCcCCCc-CCCceEEeCC-CCcccCCCcc
Q 006776 370 VG-EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPF-FGVQPVIVDE-KGVEIEGECS 445 (631)
Q Consensus 370 ~G-e~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~-~~~~~~~~G~p~-~~~~~~i~d~-~g~~~~~g~~ 445 (631)
+| .+...+..+++.+. + +++++.||+||++++++...... ......+.|.+. +++.++|+|+ ++.+++.|+.
T Consensus 302 ~~~~~~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~ 377 (540)
T PRK06164 302 ASFAPALGELAALARAR-G---VPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGES 377 (540)
T ss_pred ccCCcchHHHHHHHhhc-C---CceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCe
Confidence 66 55556666766654 3 78999999999987654332211 112334567775 7899999995 7889999999
Q ss_pred eeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcc
Q 006776 446 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 525 (631)
Q Consensus 446 Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~ 525 (631)
|||+++| |+++.|||++++.+...+.. +|||+|||+|+++++|++++.||.||+||++|++|+|.+||++|.+||+
T Consensus 378 Gel~v~g--~~~~~gY~~~~~~t~~~~~~--~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~ 453 (540)
T PRK06164 378 GEIEIRA--PSLMRGYLDNPDATARALTD--DGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPG 453 (540)
T ss_pred eEEEEec--ccccccccCCchhhhhcccC--CCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCC
Confidence 9999999 99999999999888776654 7899999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCc---hhhHHHHHHH
Q 006776 526 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSG---KIMRRILRKI 602 (631)
Q Consensus 526 V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sG---Ki~r~~l~~~ 602 (631)
|.+++|++++. ..++.++++|++.++...+ .++|+++|+++|+++++|+.+++++.+|+|.+| |++|+.|+++
T Consensus 454 v~~~~v~~~~~-~~~~~~~~~vv~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~ 529 (540)
T PRK06164 454 VAAAQVVGATR-DGKTVPVAFVIPTDGASPD---EAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREM 529 (540)
T ss_pred ceeEEEEecCC-CCceeEEEEEEeCCCCCCC---HHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHH
Confidence 99999999884 4567899999987765444 678999999999999999999999999999999 9999999999
Q ss_pred HhcCc
Q 006776 603 ASRQL 607 (631)
Q Consensus 603 ~~~~~ 607 (631)
+.+..
T Consensus 530 ~~~~~ 534 (540)
T PRK06164 530 AQARL 534 (540)
T ss_pred HHHhh
Confidence 87653
No 82
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.8e-65 Score=566.02 Aligned_cols=515 Identities=18% Similarity=0.186 Sum_probs=392.3
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.++|++++. .+|+++|+++.+.. +..+.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 40 ~l~~~l~~~a~-~~p~~~a~~~~~~~-~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~ 117 (614)
T PRK08180 40 RLTDRLVHWAQ-EAPDRVFLAERGAD-GGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYA 117 (614)
T ss_pred cHHHHHHHHHH-HCCCCceeeeccCC-CceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 45678888887 79999999875322 33578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCC-----HHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccc
Q 006776 134 GAVHSVVFAGFS-----SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 208 (631)
Q Consensus 134 G~v~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 208 (631)
|++++|+++.++ .+++.+++++++++++|+++... ....+.... .....++......
T Consensus 118 Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~-----------~~~~~~~~~---~~~~~~i~~~~~~---- 179 (614)
T PRK08180 118 GVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA-----------FARALAAVV---PADVEVVAVRGAV---- 179 (614)
T ss_pred CCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH-----------HHHHHhhhc---cCCceEEEecCCC----
Confidence 999999999998 79999999999999999875311 111111110 1111222222110
Q ss_pred ccCcCCCCCccchhhhcccCCCC---CCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCC--CCc
Q 006776 209 ENTKWQDGRDIWWQDVVPKYPTK---CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK--PSD 283 (631)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~--~~d 283 (631)
.......|.++....... .......++++++|+|||||||.||||++||++++.+.... ...++.. .++
T Consensus 180 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~-~~~~~~~~~~~~ 253 (614)
T PRK08180 180 -----PGRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQML-AQTFPFLAEEPP 253 (614)
T ss_pred -----CCcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHH-HhhccccCCCCc
Confidence 000112344444321110 11123457899999999999999999999999966554432 3334443 568
Q ss_pred EEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCc--cccccCC
Q 006776 284 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE--YVTRYSR 361 (631)
Q Consensus 284 ~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~~~l 361 (631)
++++.+|++|++|....++.++..|+++++.++.+.......+++.++++++|+++++|+++..|++.... .....++
T Consensus 254 ~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~ 333 (614)
T PRK08180 254 VLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFF 333 (614)
T ss_pred EEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhc
Confidence 99999999999998777888999999999976432222345778999999999999999999999875321 1223457
Q ss_pred CceeEEEEccCCCCHhHHHHHHHH----hCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCC
Q 006776 362 KSLRVLGSVGEPINPSAWRWFFNV----VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKG 437 (631)
Q Consensus 362 ~~lr~v~~~Ge~l~~~~~~~~~~~----~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g 437 (631)
++||.+++||+++++++.+++.+. +|. ++++++.||+||++++++..... ...++++|+|++|++++++|++
T Consensus 334 ~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d~~- 409 (614)
T PRK08180 334 SRLKLLFYAGAALSQDVWDRLDRVAEATCGE-RIRMMTGLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVPVG- 409 (614)
T ss_pred cceeEEEEccCCCCHHHHHHHHHHHHhhcCC-CceeeeeecccccCCceEecccc--cCCCCcccCccCCcEEEEecCC-
Confidence 899999999999999999999875 332 37899999999998765533322 2467899999999999999863
Q ss_pred cccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEE----ccCCeEEEEeecCCeEec-Cceeec
Q 006776 438 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSR----DKDGYHWLTGRVDDVINV-SGHRIG 512 (631)
Q Consensus 438 ~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~----~~dG~l~i~GR~dd~i~~-~G~~i~ 512 (631)
..|||+++| |+++.|||++++.+...+.. +|||+|||+|++ |+||+++|+||+||+|++ +|++|+
T Consensus 410 ------~~GEi~vrg--~~v~~GY~~~p~~t~~~~~~--dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~ 479 (614)
T PRK08180 410 ------GKLEVRVKG--PNVTPGYWRAPELTAEAFDE--EGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVS 479 (614)
T ss_pred ------CCcEEEEec--CccchhhcCChhHhHhhccc--CCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEec
Confidence 359999999 99999999999887776643 799999999999 468999999999998886 598776
Q ss_pred --hHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCC---------CCc--H-HHHHHHHHHHHhhcCCCc---
Q 006776 513 --TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV---------PYS--E-ELRKSLVLAVRKQIGAFA--- 575 (631)
Q Consensus 513 --~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~---------~~~--~-~~~~~i~~~~~~~l~~~~--- 575 (631)
|.|+|.++.+||.|.+++|+|.+++ .+.++|+++++. ..+ + ...++|+++|++.|..+.
T Consensus 480 ~~p~Eie~~l~~~p~V~~a~V~g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 555 (614)
T PRK08180 480 VGPLRARAVSAGAPLVQDVVITGHDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQA 555 (614)
T ss_pred chhhhHHHHhhcCchhheEEEEcCCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhc
Confidence 7899999999999999999998765 367888876541 000 0 012345666655555554
Q ss_pred -----cCceEEECCCCCCCC------CchhhHHHHHHHHhcCcCCCCC
Q 006776 576 -----APDKIHWAPGLPKTR------SGKIMRRILRKIASRQLDELGD 612 (631)
Q Consensus 576 -----~p~~i~~v~~lP~t~------sGKi~r~~l~~~~~~~~~~~~~ 612 (631)
+|+.+++++++|++. +||+.|+.+.+.|.++++++++
T Consensus 556 ~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~lY~ 603 (614)
T PRK08180 556 TGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEALYA 603 (614)
T ss_pred cccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHHHhC
Confidence 899999999999875 5689999999999999888875
No 83
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-64 Score=550.04 Aligned_cols=481 Identities=22% Similarity=0.246 Sum_probs=392.9
Q ss_pred chhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHH
Q 006776 51 ITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 130 (631)
Q Consensus 51 ~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~ 130 (631)
..|+.. .|.+++. .+|+++|+++. .+.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 34 ~~~~~~-~~~~~a~-~~p~~~a~~~~------~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~ 105 (516)
T PRK13383 34 GTNPYT-LLAVTAA-RWPGRTAIIDD------DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAV 105 (516)
T ss_pred CCcHHH-HHHHHHH-HCCCCcEEEeC------CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 345444 4566666 69999999853 358999999999999999999999999999999999999999999999
Q ss_pred HHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccccc
Q 006776 131 ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN 210 (631)
Q Consensus 131 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 210 (631)
+++|++++|+++.++.+++.+++++++++++++++.... .+. .. . ..++.+.....
T Consensus 106 ~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~----~~----~--~~~~~~~~~~~----- 161 (516)
T PRK13383 106 GLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAE---------RIA----GA----D--DAVAVIDPATA----- 161 (516)
T ss_pred HHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHH---------HHH----hh----h--cceEEeccchh-----
Confidence 999999999999999999999999999999999865321 111 11 0 11222211000
Q ss_pred CcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHH-HHHHHHHHhcCCCCCcEEEEec
Q 006776 211 TKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMV-HTATTFKYAFDYKPSDVYWCTA 289 (631)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~-~~~~~~~~~~~~~~~d~~~~~~ 289 (631)
...+ .. ..+...+++++|+|||||||.||+|+++|..... .........+++.++|+++..+
T Consensus 162 ---------~~~~----~~----~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 224 (516)
T PRK13383 162 ---------GAEE----SG----GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAM 224 (516)
T ss_pred ---------hhhc----CC----CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEec
Confidence 0000 00 0012345678999999999999999999874211 1111222346788999999999
Q ss_pred ccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEE
Q 006776 290 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGS 369 (631)
Q Consensus 290 ~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~ 369 (631)
|++|.+|+. .++.++..|+++++... ++++.+++.++++++|.+.++|+++..+.+.........+++++|.+++
T Consensus 225 pl~h~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~ 299 (516)
T PRK13383 225 PMFHGLGLG-MLMLTIALGGTVLTHRH----FDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMS 299 (516)
T ss_pred CCcchhhHH-HHHHHHhcCCEEEECCC----CCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEE
Confidence 999999974 56778999999987643 4889999999999999999999999999876432222345789999999
Q ss_pred ccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEE
Q 006776 370 VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLC 449 (631)
Q Consensus 370 ~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~ 449 (631)
||+++++++++++.+.++ +++++.||+||++....... ......++++|.|+++++++|+|++|++++.|+.|||+
T Consensus 300 gG~~l~~~~~~~~~~~~g---~~v~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~ 375 (516)
T PRK13383 300 SGDRLDPTLGQRFMDTYG---DILYNGYGSTEVGIGALATP-ADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVTGRIF 375 (516)
T ss_pred CCCCCCHHHHHHHHHHcC---chhhhcccccccccceeccc-cccccCCCcccCCCCCcEEEEECCCCCCCCCCCceEEE
Confidence 999999999999999997 67999999999986554332 22234568899999999999999999999999999999
Q ss_pred EecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceE
Q 006776 450 IKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEA 529 (631)
Q Consensus 450 v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~ 529 (631)
++| +.++.+|++++.. .. .+|||+|||+|++|++|++++.||.||+||++|++|+|.+||++|.+||+|.++
T Consensus 376 v~g--~~~~~~Y~~~~~~---~~---~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~ 447 (516)
T PRK13383 376 VGG--ELAGTRYTDGGGK---AV---VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADN 447 (516)
T ss_pred Eec--CcccccccCCchh---he---ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEE
Confidence 999 8999999987542 11 279999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 530 AVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 530 ~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
+++++++...++.+.++|++.++...+ .++|+++++++++++++|..+.++++||+|.+||++|+.|+
T Consensus 448 ~vv~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 448 AVIGVPDERFGHRLAAFVVLHPGSGVD---AAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EEEeccccccCceEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 999999888889999999988765443 56799999999999999999999999999999999999874
No 84
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-64 Score=557.77 Aligned_cols=501 Identities=23% Similarity=0.307 Sum_probs=391.4
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.++|..++. .+|+++|+++. .+.+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++
T Consensus 38 tl~~~l~~~a~-~~p~~~Ai~~~------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~ 110 (600)
T PRK08279 38 SLGDVFEEAAA-RHPDRPALLFE------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKL 110 (600)
T ss_pred cHHHHHHHHHH-hCCCCcEEEeC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 46678888887 79999999964 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++++++.++.+++.++++.++++++|+++... ..+....... .....++..+.... .
T Consensus 111 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~----~--- 170 (600)
T PRK08279 111 GAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELV---------EAFEEARADL----ARPPRLWVAGGDTL----D--- 170 (600)
T ss_pred CcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHH---------HHHHHHhhhh----cccceEEEecCccc----c---
Confidence 99999999999999999999999999999976432 2222222222 12122222221100 0
Q ss_pred CCCCccchhhhc---ccCCC--CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEe
Q 006776 214 QDGRDIWWQDVV---PKYPT--KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCT 288 (631)
Q Consensus 214 ~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~ 288 (631)
....|.++. ...+. .........+++++|+|||||||.||||+++|++++.+... ....+++.++|++++.
T Consensus 171 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~-~~~~~~l~~~d~~l~~ 246 (600)
T PRK08279 171 ---DPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGG-FGGLLRLTPDDVLYCC 246 (600)
T ss_pred ---ccccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHH-HHHhcCCCCCcEEEEe
Confidence 011122221 11111 11122346789999999999999999999999996655444 3445889999999999
Q ss_pred cccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEE
Q 006776 289 ADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLG 368 (631)
Q Consensus 289 ~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~ 368 (631)
+|++|.+|+...++.++..|+++++.+. +++..+++.++++++|++.++|++++.+....... ...+.++|.+
T Consensus 247 ~pl~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~--~~~~~~l~~~- 319 (600)
T PRK08279 247 LPLYHNTGGTVAWSSVLAAGATLALRRK----FSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKP--TDRDHRLRLM- 319 (600)
T ss_pred cCchhhhhHHHHHHHHHhcCcEEEEcCC----CCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCc--cccCcceeEE-
Confidence 9999999987777788888999888654 48889999999999999999999999988764321 2244567764
Q ss_pred EccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcC----CCce---------EEeCC
Q 006776 369 SVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFF----GVQP---------VIVDE 435 (631)
Q Consensus 369 ~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~----~~~~---------~i~d~ 435 (631)
+|+.+++++++++.+.++. ..+++.||+||++..... . ...++++|.+.+ +..+ .+.+.
T Consensus 320 -~g~~l~~~~~~~~~~~~~~--~~l~~~YG~tE~~~~~~~-~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~ 391 (600)
T PRK08279 320 -IGNGLRPDIWDEFQQRFGI--PRILEFYAASEGNVGFIN-V----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDA 391 (600)
T ss_pred -ecCCCCHHHHHHHHHHhCc--ceeeeeecccccceeecc-c----CCCCcccccccccccccceeeeeccCcCceeeCC
Confidence 4788999999999999983 469999999998864432 1 124456776555 3322 23333
Q ss_pred CC--cccCCCcceeEE--EecCCCcccccccCCchhhhhhcc----ccCCCeEecCceEEEccCCeEEEEeecCCeEecC
Q 006776 436 KG--VEIEGECSGYLC--IKSSWPGAFRTLYGDHERYETTYF----KPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS 507 (631)
Q Consensus 436 ~g--~~~~~g~~Gel~--v~~~~p~~~~gy~~~~~~~~~~~~----~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~ 507 (631)
++ .+++.|+.|||+ +.+ ++++.|| ++++.+...+. ...++||+|||+|++|+||++++.||.||+||++
T Consensus 392 ~~~~~~~~~g~~Gel~~~i~~--~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~ 468 (600)
T PRK08279 392 DGRCIKVKPGEVGLLIGRITD--RGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWK 468 (600)
T ss_pred CCccccCCCCCceeEEEEecC--ccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEEC
Confidence 33 256788899999 567 8999999 87776665543 2346899999999999999999999999999999
Q ss_pred ceeechHHHHHHHhcCcccceEEEEeeecCC-CCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCC
Q 006776 508 GHRIGTAEVESALVSHPQCAEAAVVGVEHEV-KGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGL 586 (631)
Q Consensus 508 G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~l 586 (631)
|++|+|.|||++|.+||+|.+|+|++++++. .++..++++++.++...+ .++++++|+++|+.|++|..|+++++|
T Consensus 469 G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~~---~~~l~~~l~~~L~~~~~P~~i~~v~~l 545 (600)
T PRK08279 469 GENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEFD---LAALAAHLYERLPAYAVPLFVRLVPEL 545 (600)
T ss_pred CcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCccCC---HHHHHHHHHhhCccccCCeEEEeecCC
Confidence 9999999999999999999999999998765 345566666666544333 678999999999999999999999999
Q ss_pred CCCCCchhhHHHHHHHHhcC
Q 006776 587 PKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 587 P~t~sGKi~r~~l~~~~~~~ 606 (631)
|+|.+||++|+.|++++.+.
T Consensus 546 P~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 546 ETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred CCCcchhhhHHHHhhcCCCc
Confidence 99999999999999988776
No 85
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=4.8e-64 Score=552.31 Aligned_cols=510 Identities=22% Similarity=0.292 Sum_probs=404.4
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHH-HCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLK-DIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~-~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
.+.++|.+++. .+|+++|+++. ++.+||.||.+++.++|+.|. +.|+++||+|+++++|++++++++|||++
T Consensus 26 ~~~~~l~~~~~-~~~~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 98 (560)
T PRK08751 26 TVAEVFATSVA-KFADRPAYHSF------GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLR 98 (560)
T ss_pred cHHHHHHHHHH-hCCCCceEEEC------CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 35678888887 79999999853 468999999999999999996 68999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc-----
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT----- 207 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----- 207 (631)
+|++++|++|.++.+++.+++++++++++++++... ..+..+... .....+++........
T Consensus 99 ~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 164 (560)
T PRK08751 99 AGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFG---------TTVQQVIAD-----TPVKQVITTGLGDMLGFPKAA 164 (560)
T ss_pred hCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhH---------HHHHHHhhC-----CCccEEEEechhhhcccccch
Confidence 999999999999999999999999999999987532 122222211 1223333321000000
Q ss_pred ----------cccCcCCCCCccchhhhcccCCC-CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHh
Q 006776 208 ----------RENTKWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 276 (631)
Q Consensus 208 ----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~ 276 (631)
.............|.+....... ..+......+++++++|||||||.||+|+++|.+++.+...... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~-~ 243 (560)
T PRK08751 165 LVNFVVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQ-W 243 (560)
T ss_pred hhhhhhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHH-h
Confidence 00000001112223333222111 12223356789999999999999999999999996555443322 2
Q ss_pred cC----CCCC-cEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhc
Q 006776 277 FD----YKPS-DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 351 (631)
Q Consensus 277 ~~----~~~~-d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~ 351 (631)
++ +.++ +++++..++.|++|.....+.++..|++.++.... .++..+++.++++++|++.++|+++..+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 320 (560)
T PRK08751 244 LAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNP---RDMPGFVKELKKTRFTAFTGVNTLFNGLLNT 320 (560)
T ss_pred hccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCc---CCHHHHHHHHHhcceeEecChHHHHHHHHcC
Confidence 22 3444 56778889999888765566777788887776542 3788999999999999999999999999886
Q ss_pred CCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceE
Q 006776 352 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 431 (631)
Q Consensus 352 ~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 431 (631)
.. ..+.+++++|.+++||+++++.+.+.+.+.++ +++++.||+||+++.++.... .....++++|.|++++.++
T Consensus 321 ~~--~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~~~~v~ 394 (560)
T PRK08751 321 PG--FDQIDFSSLKMTLGGGMAVQRSVAERWKQVTG---LTLVEAYGLTETSPAACINPL-TLKEYNGSIGLPIPSTDAC 394 (560)
T ss_pred cC--cCCcchhhheeeeeCCCCCCHHHHHHHHHHhC---CeEEEeeccccCCCceecccc-cccccCCCcCccCCCceEE
Confidence 43 23456789999999999999999999999886 689999999999876543321 1224567899999999999
Q ss_pred EeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceee
Q 006776 432 IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRI 511 (631)
Q Consensus 432 i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i 511 (631)
++|++|.+++.|+.|||++++ |.++.|||++++.+...+. .+|||+|||+|+++++|++++.||.||+|+++|++|
T Consensus 395 i~d~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v 470 (560)
T PRK08751 395 IKDDAGTVLAIGEIGELCIKG--PQVMKGYWKRPEETAKVMD--ADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNV 470 (560)
T ss_pred EECCCCCCCCCCCceEEEEec--CccchhhcCChhhhhhccc--cCCCccccceEEEcCCceEEEEeechhheeECCEEE
Confidence 999999999999999999999 8999999999987765553 368999999999999999999999999999999999
Q ss_pred chHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCC
Q 006776 512 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRS 591 (631)
Q Consensus 512 ~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~s 591 (631)
+|.+||++|.+||+|.+++|+++++...++.+.++++... ...+ .++++++++++++++++|..++++++||+|++
T Consensus 471 ~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~-~~~~---~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~ 546 (560)
T PRK08751 471 YPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKD-PALT---AEDVKAHARANLTGYKQPRIIEFRKELPKTNV 546 (560)
T ss_pred cHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCC-CCCC---HHHHHHHHHHhhhhccCCeEEEEhhhCCCCcc
Confidence 9999999999999999999999999888888888777543 2223 56788999999999999999999999999999
Q ss_pred chhhHHHHHHH
Q 006776 592 GKIMRRILRKI 602 (631)
Q Consensus 592 GKi~r~~l~~~ 602 (631)
||++|+.|++.
T Consensus 547 gKv~r~~L~~~ 557 (560)
T PRK08751 547 GKILRRELRDA 557 (560)
T ss_pred ccccHHHHHHh
Confidence 99999999976
No 86
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-64 Score=539.48 Aligned_cols=455 Identities=22% Similarity=0.309 Sum_probs=384.4
Q ss_pred CCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCC
Q 006776 66 GLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFS 145 (631)
Q Consensus 66 ~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~ 145 (631)
..++++|+++. .+++||.||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|+++.++
T Consensus 12 ~~~~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~ 80 (471)
T PRK07787 12 AADIADAVRIG------GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSG 80 (471)
T ss_pred ccCCceEEEeC------CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCC
Confidence 46799999864 578999999999999999996 5799999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhc
Q 006776 146 SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVV 225 (631)
Q Consensus 146 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (631)
.+++..++++++++++++++.... ..+.... +... . ..|..
T Consensus 81 ~~~l~~~l~~~~~~~il~~~~~~~----------------------~~~~~~~-~~~~------~--------~~~~~-- 121 (471)
T PRK07787 81 VAERRHILADSGAQAWLGPAPDDP----------------------AGLPHVP-VRLH------A--------RSWHR-- 121 (471)
T ss_pred hHHHHHHHHhcCCCEEEecCCccc----------------------cccccee-eecc------c--------ccccc--
Confidence 999999999999999998753110 0111000 0000 0 00000
Q ss_pred ccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhh
Q 006776 226 PKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPM 305 (631)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l 305 (631)
.....++++++|+|||||||.||+|+++|++++.+.. .....+++.+++++++.+|++|.+|+...++.++
T Consensus 122 --------~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 192 (471)
T PRK07787 122 --------YPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLD-ALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPL 192 (471)
T ss_pred --------CCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHH-HHHHhcCCCccceeEeccCCeeechhHHHHHHHH
Confidence 0113578999999999999999999999999655443 3344678889999999999999999988899999
Q ss_pred hcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHH
Q 006776 306 LNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNV 385 (631)
Q Consensus 306 ~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~ 385 (631)
..|+++++.+. +++..+++.++ ++++++.++|+++..|.+... ....++++|.+++||+++++++++++.+.
T Consensus 193 ~~G~~~~~~~~----~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~---~~~~l~~l~~~~~gg~~~~~~~~~~~~~~ 264 (471)
T PRK07787 193 RIGNRFVHTGR----PTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE---AARALRGARLLVSGSAALPVPVFDRLAAL 264 (471)
T ss_pred hcCCEEEecCC----CCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc---ccccccceeEEEECCCCCCHHHHHHHHHH
Confidence 99999998754 48899999999 999999999999999987532 22357899999999999999999999998
Q ss_pred hCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccC-CC-cceeEEEecCCCcccccccC
Q 006776 386 VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIE-GE-CSGYLCIKSSWPGAFRTLYG 463 (631)
Q Consensus 386 ~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~-~g-~~Gel~v~~~~p~~~~gy~~ 463 (631)
++ .++++.||+||++........ ....++++|+|++|++++|+|++|.+++ .| +.|||+++| ++++.|||+
T Consensus 265 ~~---~~~~~~YG~tE~~~~~~~~~~--~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~~Gei~v~g--~~~~~gy~~ 337 (471)
T PRK07787 265 TG---HRPVERYGMTETLITLSTRAD--GERRPGWVGLPLAGVETRLVDEDGGPVPHDGETVGELQVRG--PTLFDGYLN 337 (471)
T ss_pred cC---CCeecccCccccCcceecCCC--CcccCCcccccCCCcEEEEECCCCCCCCCCCCCceEEEEEC--cccchhhcC
Confidence 87 689999999999865433222 2345678999999999999999999887 34 479999999 899999999
Q ss_pred CchhhhhhccccCCCeEecCceEEEccCCeEEEEeec-CCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCee
Q 006776 464 DHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRV-DDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQG 542 (631)
Q Consensus 464 ~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~-dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~ 542 (631)
+++.+...+.. +|||+|||+|++++||+++++||. ||+++.+|++|+|.+||++|.+++.|.+++|++.++...++.
T Consensus 338 ~~~~t~~~~~~--~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 415 (471)
T PRK07787 338 RPDATAAAFTA--DGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQR 415 (471)
T ss_pred ChhhchhcccC--CCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeE
Confidence 99888776643 689999999999999999999996 899999999999999999999999999999999998888899
Q ss_pred EEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHH
Q 006776 543 IYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 601 (631)
Q Consensus 543 ~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~ 601 (631)
++++|+.... .+ .+++.+++++.|+++++|..++++++||+|.+||++|+.|++
T Consensus 416 ~~a~v~~~~~--~~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 416 IVAYVVGADD--VA---ADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred EEEEEEeCCC--CC---HHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhcc
Confidence 9999997433 22 567899999999999999999999999999999999999976
No 87
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.4e-64 Score=608.37 Aligned_cols=491 Identities=21% Similarity=0.289 Sum_probs=402.7
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++.++|.+++. .+|+++|+++. .+.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 459 ~l~~~~~~~~~-~~p~~~Al~~~------~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~ 531 (1296)
T PRK10252 459 TLSALVAQQAA-KTPDAPALADA------RYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEA 531 (1296)
T ss_pred CHHHHHHHHHH-hCCCCeEEEcC------CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 46678888888 79999999864 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|+++.+++.+++++++++++++++...... ... +.+. ++....
T Consensus 532 G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~-------------~~~----~~~~-~~~~~~----------- 582 (1296)
T PRK10252 532 GAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRF-------------ADV----PDLT-SLCYNA----------- 582 (1296)
T ss_pred CCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhc-------------ccC----CCce-eeeccc-----------
Confidence 99999999999999999999999999999986532110 000 1111 110100
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.... ....+.....++++++|+|||||||.||||+++|+++ .+........+++.++|++++.++++|
T Consensus 583 ----------~~~~-~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l-~~~~~~~~~~~~~~~~d~~l~~~~~~f 650 (1296)
T PRK10252 583 ----------PLAP-QGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAI-VNRLLWMQNHYPLTADDVVLQKTPCSF 650 (1296)
T ss_pred ----------cccc-ccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHH-HHHHHHHHHhcCCCCCCEEEEeCCcch
Confidence 0000 0000111235789999999999999999999999995 444455566789999999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..+. +.++.+|+.|+++++.+... ..++..+++.++++++|++.++|+++..+++..........++++|.+++|||+
T Consensus 651 d~~~-~~~~~~l~~G~~l~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 728 (1296)
T PRK10252 651 DVSV-WEFFWPFIAGAKLVMAEPEA-HRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEA 728 (1296)
T ss_pred hhhH-HHHHHHHhCCCEEEECChhc-cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCC
Confidence 8875 67889999999999976432 348899999999999999999999999988764322222346899999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC-C----CCCCCCcCCCcCCCceEEeCCCCcccCCCcceeE
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-W----PQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYL 448 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~-~----~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel 448 (631)
+++++.+.+.+.++ ++++|.||+||++..++...... . ...+.++|+|++++.++|+|+++++++.|+.|||
T Consensus 729 l~~~~~~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g~~Gel 805 (1296)
T PRK10252 729 LPADLCREWQQLTG---APLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPGVAGDL 805 (1296)
T ss_pred CCHHHHHHHHhcCC---CEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCCCceEE
Confidence 99999999988775 78999999999986554322111 1 2335679999999999999999999999999999
Q ss_pred EEecCCCcccccccCCchhhhhhcccc----CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCc
Q 006776 449 CIKSSWPGAFRTLYGDHERYETTYFKP----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHP 524 (631)
Q Consensus 449 ~v~~~~p~~~~gy~~~~~~~~~~~~~~----~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~ 524 (631)
+|+| ++++.||+++++.+...|... .++||+|||+|++++||+++++||.||+||++|+||++.|||++|.+||
T Consensus 806 ~i~g--~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~ 883 (1296)
T PRK10252 806 YLTG--IQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALP 883 (1296)
T ss_pred Eecc--cccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCc
Confidence 9999 999999999998877776432 3459999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEeee----cCCCC--eeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHH
Q 006776 525 QCAEAAVVGVE----HEVKG--QGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRI 598 (631)
Q Consensus 525 ~V~~~~vv~~~----~~~~~--~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~ 598 (631)
+|.+++|+++. +...+ ..++++|+...+...+ .++|+++++++|+.|++|..++.+++||+|++||++|++
T Consensus 884 ~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~---~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~ 960 (1296)
T PRK10252 884 DVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLD---TSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKA 960 (1296)
T ss_pred cccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCC---HHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHh
Confidence 99999887653 11122 3789999987665444 568999999999999999999999999999999999999
Q ss_pred HHHH
Q 006776 599 LRKI 602 (631)
Q Consensus 599 l~~~ 602 (631)
|++.
T Consensus 961 L~~~ 964 (1296)
T PRK10252 961 LPLP 964 (1296)
T ss_pred cCCC
Confidence 9763
No 88
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=2.1e-63 Score=540.90 Aligned_cols=493 Identities=19% Similarity=0.257 Sum_probs=406.3
Q ss_pred hhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCC
Q 006776 56 YNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGA 135 (631)
Q Consensus 56 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~ 135 (631)
.++|++++. .+|+++|++.. .+.+||.||.+.+.++|..|.+.|+++||+|+++++|+.+++++++||+++|+
T Consensus 5 ~~~l~~~a~-~~p~~~~~~~~------~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~ 77 (503)
T PRK04813 5 IETIEEFAQ-TQPDFPAYDYL------GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGH 77 (503)
T ss_pred HHHHHHHHH-hCCCceEEEeC------CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 367777887 79999998853 46899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCC
Q 006776 136 VHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQD 215 (631)
Q Consensus 136 v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 215 (631)
+++++++.++.+++..+++.++++++++.+...... ..+. .+....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~-~~~~~~------------- 123 (503)
T PRK04813 78 AYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------------------LGIP-VITLDE------------- 123 (503)
T ss_pred EEecCCCCChHHHHHHHHHhcCCCEEEecccccccc--------------------cCCc-EEehHH-------------
Confidence 999999999999999999999999999986531000 0000 000000
Q ss_pred CCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceec
Q 006776 216 GRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWIT 295 (631)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 295 (631)
+.+...............++++++++|||||||.||+|.++|++++..... ....+++..+++++...|++|..
T Consensus 124 -----~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~ 197 (503)
T PRK04813 124 -----LKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNW-MLEDFALPEGPQFLNQAPYSFDL 197 (503)
T ss_pred -----hhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHH-HHHHcCCCcCceeeecCCcchhH
Confidence 000000000001112346788999999999999999999999996654443 33457888999999999999988
Q ss_pred chhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCC
Q 006776 296 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPIN 375 (631)
Q Consensus 296 g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~ 375 (631)
+. +.++.++..|++++++++.. ..++..+++.+++++++.+..+|++++.+..... ....+++++|.++++|++++
T Consensus 198 ~~-~~~~~~l~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~--~~~~~~~~l~~i~~~G~~l~ 273 (503)
T PRK04813 198 SV-MDLYPTLASGGTLVALPKDM-TANFKQLFETLPQLPINVWVSTPSFADMCLLDPS--FNEEHLPNLTHFLFCGEELP 273 (503)
T ss_pred hH-HHHHHHHhcCCEEEEcChhh-hcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhc--cCcccCCCceEEEEecCcCC
Confidence 75 56678899999999987533 2478999999999999999999999988765432 22346789999999999999
Q ss_pred HhHHHHHHHHhCCCCcceecccccccccceecccCCCC---CCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEec
Q 006776 376 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 452 (631)
Q Consensus 376 ~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~---~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~ 452 (631)
+.+.+++.+.++ ++++++.||+||++..++...... ......++|+|.++++++|+|++|.+++.|+.|||++++
T Consensus 274 ~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~ 351 (503)
T PRK04813 274 HKTAKKLLERFP--SATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQGEIVISG 351 (503)
T ss_pred HHHHHHHHHHCC--CceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCceEEEEec
Confidence 999999999986 478999999999986544321111 124456799999999999999999999999999999999
Q ss_pred CCCcccccccCCchhhhhhccc-cCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEE
Q 006776 453 SWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 531 (631)
Q Consensus 453 ~~p~~~~gy~~~~~~~~~~~~~-~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~v 531 (631)
|+++.|||++++.+...|+. ...+||+|||++++ ++|++++.||.||+|+++|++++|.+||+++.++|+|.+++|
T Consensus 352 --~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 428 (503)
T PRK04813 352 --PSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVV 428 (503)
T ss_pred --cccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEE
Confidence 99999999999888777654 22359999999999 999999999999999999999999999999999999999999
Q ss_pred EeeecCCCCeeEEEEEEeCCCC-CCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHh
Q 006776 532 VGVEHEVKGQGIYAFVTLVEGV-PYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 532 v~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~ 604 (631)
++.++...++.++++|+..++. ....++.++++++++++++++++|..++++++||+|++||++|+.|++.++
T Consensus 429 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 429 VPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred EEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 9988777778899999887642 223456678999999999999999999999999999999999999999875
No 89
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=8.4e-65 Score=650.32 Aligned_cols=492 Identities=20% Similarity=0.261 Sum_probs=411.8
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
.+++++|.+++. .+|+++|+++. .+++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 3095 ~~~~~l~~~~a~-~~p~~~Av~~~------~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~ 3167 (3956)
T PRK12467 3095 RLVHQLIEAQVA-RTPEAPALVFG------DQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLK 3167 (3956)
T ss_pred ccHHHHHHHHHH-hCCCcceEeeC------CcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHh
Confidence 367889998888 79999999974 46899999999999999999999999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCc
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 212 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 212 (631)
+|++++|++|.++.+++.+++++++++++|++....... .. .....++.++...
T Consensus 3168 aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~-------------~~-----~~~~~~~~~~~~~-------- 3221 (3956)
T PRK12467 3168 AGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQL-------------PA-----PAGDTALTLDRLD-------- 3221 (3956)
T ss_pred hCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhc-------------cc-----ccCCceeeecchh--------
Confidence 999999999999999999999999999999976432110 00 0001122221110
Q ss_pred CCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccc
Q 006776 213 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 292 (631)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 292 (631)
+. ......+.....+++++||+|||||||.||||+++|+++. +........+++.++|++++.+++.
T Consensus 3222 --------~~----~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~ 3288 (3956)
T PRK12467 3222 --------LN----GYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALA-NHLCWIAEAYELDANDRVLLFMSFS 3288 (3956)
T ss_pred --------hc----ccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHH-HHHHHHHHhcCCCcCCEEEEecCcc
Confidence 00 0011112223568999999999999999999999999954 4444555678999999999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|..+. ..++.+|+.|+++++.++ ...++..+++.|+++++|++.++|++++.+++... ..++++||.+++|||
T Consensus 3289 fd~~~-~~~~~~L~~G~~l~i~~~--~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~----~~~~~~lr~~~~gGe 3361 (3956)
T PRK12467 3289 FDGAQ-ERFLWTLICGGCLVVRDN--DLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG----GADCASLDIYVFGGE 3361 (3956)
T ss_pred HhHHH-HHHHHHHhCCCEEEECCc--ccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc----ccCCCCceEEEEecC
Confidence 98774 678999999999999872 23489999999999999999999999999987532 236788999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC---CCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEE
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLC 449 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~---~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~ 449 (631)
++++++.+++.+.++ ++.++|.||+||++..++...... ......++|+|++|++++|+|+++++++.|+.|||+
T Consensus 3362 ~~~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~~GEL~ 3439 (3956)
T PRK12467 3362 AVPPAAFEQVKRKLK--PRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGVAGELY 3439 (3956)
T ss_pred CCCHHHHHHHHHhCC--CCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCCCceEE
Confidence 999999999998876 478999999999987655322111 112346899999999999999999999999999999
Q ss_pred EecCCCcccccccCCchhhhhhcccc-----CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCc
Q 006776 450 IKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHP 524 (631)
Q Consensus 450 v~~~~p~~~~gy~~~~~~~~~~~~~~-----~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~ 524 (631)
|+| |+++.|||++++.+.+.|... ..+||+|||+|++++||+++++||+||+||++|+||+|.|||++|.+||
T Consensus 3440 i~G--~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p 3517 (3956)
T PRK12467 3440 IGG--VGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHP 3517 (3956)
T ss_pred Ecc--hhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCc
Confidence 999 999999999999888877532 2358999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHh
Q 006776 525 QCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 525 ~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~ 604 (631)
+|.+++|++..+ ..++.+++||+....... ..++|+++++++|+.|++|..|+++++||+|++||++|++|++...
T Consensus 3518 ~V~~a~v~~~~~-~~~~~lva~v~~~~~~~~---~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 3593 (3956)
T PRK12467 3518 SVREAVVLARDG-AGGKQLVAYVVPADPQGD---WRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDA 3593 (3956)
T ss_pred ccceEEEEEecC-CCCcEEEEEEeCCCCCcc---cHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCc
Confidence 999999998754 467889999998765332 2678999999999999999999999999999999999999987654
Q ss_pred c
Q 006776 605 R 605 (631)
Q Consensus 605 ~ 605 (631)
.
T Consensus 3594 ~ 3594 (3956)
T PRK12467 3594 K 3594 (3956)
T ss_pred c
Confidence 4
No 90
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-63 Score=539.49 Aligned_cols=484 Identities=26% Similarity=0.347 Sum_probs=398.6
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEE
Q 006776 82 VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 161 (631)
Q Consensus 82 ~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 161 (631)
..+.+||.||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++
T Consensus 8 ~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 8 SGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred CCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCcccCCcccccHHHHHHHHHHhhhcCC-CccEEEEEecCCccccccCcCCCCCccchhhhcccCCCCCCceecCCC
Q 006776 162 ITSNAVKRGPKAIHLKDIVDAALDECAKSGI-SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAE 240 (631)
Q Consensus 162 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (631)
++++... ..+.+..... + .++.+++..... .....|.+........ .....+
T Consensus 88 i~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~---~~~~~~ 140 (502)
T PRK08276 88 IVSAALA---------DTAAELAAEL----PAGVPLLLVVAGPV-----------PGFRSYEEALAAQPDT---PIADET 140 (502)
T ss_pred EEccchh---------hHHHHHhhhc----cccccEEEEeCCCC-----------CccccHHHHHhcCCCC---CCCCCC
Confidence 9986532 1222222222 2 344444432110 0112233332221111 113456
Q ss_pred CCeEEEeCCCCCCCCceEEEcCchHHHHHH-----HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEec
Q 006776 241 DPLFLLYTSGSTGKPKGVLHTTGGYMVHTA-----TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 315 (631)
Q Consensus 241 ~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~ 315 (631)
+.++++|||||||.||+|+++|.+...... ...........++++++.+|++|..+.... +.++..|+++++.+
T Consensus 141 ~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~~~~~g~~~~~~~ 219 (502)
T PRK08276 141 AGADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFG-MSALALGGTVVVME 219 (502)
T ss_pred cceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHH-HHHHhccceEEEcC
Confidence 789999999999999999999887543221 111112223467889999999998886544 56889999998876
Q ss_pred CCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceec
Q 006776 316 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD 395 (631)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~ 395 (631)
. +++..+++.++++++|++.++|+++..+++.........+++++|.+++||++++.++++++.+.++ .++++
T Consensus 220 ~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~---~~~~~ 292 (502)
T PRK08276 220 K----FDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG---PIIHE 292 (502)
T ss_pred C----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC---cHhhh
Confidence 4 4889999999999999999999999999987544344567899999999999999999999999887 67999
Q ss_pred ccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhcccc
Q 006776 396 TWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP 475 (631)
Q Consensus 396 ~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~ 475 (631)
.||+||++++++..... ....++++|.|+ ++.++|+|+++.+++.|+.|||++++ +.++.|||++++.+...+..
T Consensus 293 ~yG~tE~~~~~~~~~~~-~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~- 367 (502)
T PRK08276 293 YYASSEGGGVTVITSED-WLAHPGSVGKAV-LGEVRILDEDGNELPPGEIGTVYFEM--DGYPFEYHNDPEKTAAARNP- 367 (502)
T ss_pred hcccccccceeEecCcc-ccccCCCcceec-ccEEEEECCCCCCCcCCCceEEEEEC--CCccchhcCCHHHHHHHhcC-
Confidence 99999999755443322 224567899999 88999999999999999999999999 88899999999888777764
Q ss_pred CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCC
Q 006776 476 FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY 555 (631)
Q Consensus 476 ~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 555 (631)
+|||+|||+++++++|.+++.||+||+||++|.+|++.+||.+|.++|+|.+++|++++++..++.++++|+.+++...
T Consensus 368 -~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 446 (502)
T PRK08276 368 -HGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADA 446 (502)
T ss_pred -CCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCC
Confidence 4999999999999999999999999999999999999999999999999999999999998889999999999877655
Q ss_pred cHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 556 SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 556 ~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
++++.+++++.++++|+.++.|..++++++||+|++||++|+.|++.+...
T Consensus 447 ~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 447 GDALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEG 497 (502)
T ss_pred ChhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhh
Confidence 566677899999999999999999999999999999999999999998754
No 91
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3e-64 Score=655.07 Aligned_cols=491 Identities=21% Similarity=0.275 Sum_probs=411.2
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
++++++++++++ .+|+++|+++. .+++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 511 ~~~~~~~~~~a~-~~p~~~A~~~~------~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~ 583 (5163)
T PRK12316 511 RGVHRLFEEQVE-RTPEAPALAFG------EETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILK 583 (5163)
T ss_pred CCHHHHHHHHHH-HCCCCeEEEeC------CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 457899999998 79999999963 46899999999999999999999999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCc
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 212 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 212 (631)
+|++++|++|.++.+++.++++++++++++++....... ... ..+ .++.++....
T Consensus 584 aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~-------------~~~----~~~-~~~~~~~~~~------- 638 (5163)
T PRK12316 584 AGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKL-------------PLA----AGV-QVLDLDRPAA------- 638 (5163)
T ss_pred cCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhC-------------Ccc----cCc-eEEEecCcch-------
Confidence 999999999999999999999999999999876432100 000 111 1222221100
Q ss_pred CCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccc
Q 006776 213 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 292 (631)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 292 (631)
+ ........+.....++++++|+|||||||.||||+++|++++ +........+++.+++++++.+|++
T Consensus 639 --------~---~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~-~~~~~~~~~~~~~~~d~~l~~~p~~ 706 (5163)
T PRK12316 639 --------W---LEGYSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALS-NRLCWMQQAYGLGVGDTVLQKTPFS 706 (5163)
T ss_pred --------h---hccCCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHH-HHHHHHHHhcCCCCCCEEEeeCCee
Confidence 0 000011111223567899999999999999999999999955 4444555678999999999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|.++. +.++.+|+.|+++++.+.... .++..+++.|+++++|++.++|++++.|++... ..+++++|.+++|||
T Consensus 707 fd~~~-~~~~~~L~~G~~l~i~~~~~~-~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~----~~~~~~l~~~~~gGe 780 (5163)
T PRK12316 707 FDVSV-WEFFWPLMSGARLVVAAPGDH-RDPAKLVELINREGVDTLHFVPSMLQAFLQDED----VASCTSLRRIVCSGE 780 (5163)
T ss_pred hHHHH-HHHHHHHhCCCEEEECCcccc-CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc----cccCCCccEEEEeec
Confidence 99985 678999999999999865333 488999999999999999999999999987532 235789999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEec
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 452 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~ 452 (631)
++++++.+.+.+.++ +++++|.||+||++..++............++|+|++|++++|+|+++++++.|+.|||+|+|
T Consensus 781 ~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~GEl~i~G 858 (5163)
T PRK12316 781 ALPADAQEQVFAKLP--QAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVLGELYLAG 858 (5163)
T ss_pred cCCHHHHHHHHHhCC--CCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCceEEEecc
Confidence 999999999988876 478999999999985443322222223456899999999999999999999999999999999
Q ss_pred CCCcccccccCCchhhhhhccc----cCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccce
Q 006776 453 SWPGAFRTLYGDHERYETTYFK----PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAE 528 (631)
Q Consensus 453 ~~p~~~~gy~~~~~~~~~~~~~----~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~ 528 (631)
|+++.||+++++.+...|.. ..++||+|||+|++++||.++++||+||+||++|+||+|.|||++|.+||+|.+
T Consensus 859 --~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~ 936 (5163)
T PRK12316 859 --RGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVRE 936 (5163)
T ss_pred --cccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcce
Confidence 99999999999988777643 234699999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHh
Q 006776 529 AAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 529 ~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~ 604 (631)
|+|++.+ ++.++++|+..++.... .++++++++++|++|++|..++++++||+|++||++|++|++...
T Consensus 937 a~V~~~~----~~~lva~vv~~~~~~~~---~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 937 AAVLAVD----GKQLVGYVVLESEGGDW---REALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred EEEEEcC----CCeEEEEEEccCCCCCC---HHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCccc
Confidence 9999875 67899999987754433 668999999999999999999999999999999999999987544
No 92
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-63 Score=540.56 Aligned_cols=508 Identities=23% Similarity=0.295 Sum_probs=403.2
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.++++++++ .+|+++|+++. .+.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 5 l~~~~~~~a~-~~p~~~a~~~~------~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G 77 (533)
T PRK07798 5 IADLFEAVAD-AVPDRVALVCG------DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKAR 77 (533)
T ss_pred HHHHHHHHHH-hCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 4467888888 79999999863 4789999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++++++.++.+++.+++++++++++++++... ..+.+....+ +.++.++.++.... ...
T Consensus 78 ~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~- 138 (533)
T PRK07798 78 AVPVNVNYRYVEDELRYLLDDSDAVALVYEREFA---------PRVAEVLPRL----PKLRTLVVVEDGSG-----NDL- 138 (533)
T ss_pred eEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhH---------HHHHHHhccC----CCccEEEEecCCcc-----ccc-
Confidence 9999999999999999999999999999976432 2222222222 45555655543221 001
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHH--------hcCC------C
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY--------AFDY------K 280 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~--------~~~~------~ 280 (631)
......|.+.+.......... ....+.++|+|||||||.||+|+++|++++......... ...+ .
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (533)
T PRK07798 139 LPGAVDYEDALAAGSPERDFG-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAG 217 (533)
T ss_pred CCccccHHHHHhccCCcCCCC-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCC
Confidence 012334555544322211111 223456799999999999999999999965443321111 1111 5
Q ss_pred CCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHH-HHhcCCcccccc
Q 006776 281 PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRS-LMRDGNEYVTRY 359 (631)
Q Consensus 281 ~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~-l~~~~~~~~~~~ 359 (631)
++++++..+|+.|..+.+ .++.+++.|+++++.+.. .+++..+++.++++++|.+.++|..+.. +.+... .....
T Consensus 218 ~~~~~~~~~pl~~~~~~~-~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~~~~~ 293 (533)
T PRK07798 218 PGMRRFPAPPLMHGAGQW-AAFAALFSGQTVVLLPDV--RFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-ARGPY 293 (533)
T ss_pred CCceEEEecchhhhhhHH-HHHHHHhcCceEEEecCC--CcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-ccccC
Confidence 678999999999999874 778999999999998743 2488999999999999999999866533 333221 11234
Q ss_pred CCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcC--CCcCCCceEEeCCCC
Q 006776 360 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSAT--FPFFGVQPVIVDEKG 437 (631)
Q Consensus 360 ~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G--~p~~~~~~~i~d~~g 437 (631)
+++++|.+++||+++++++.+++.+.++ ++.+++.||+||++.+...... ......| .+.++..++|+|++|
T Consensus 294 ~~~~l~~i~~gG~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~----~~~~~~g~~~~~~~~~~~i~~~~~ 367 (533)
T PRK07798 294 DLSSLFAIASGGALFSPSVKEALLELLP--NVVLTDSIGSSETGFGGSGTVA----KGAVHTGGPRFTIGPRTVVLDEDG 367 (533)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHcC--CCeEEeeecccccccccccCCC----CCCccCCCCccCCCceEEEECCCC
Confidence 6789999999999999999999999885 4789999999999754443211 1112233 788899999999999
Q ss_pred cccCCCcc--eeEEEecCCCcccccccCCchhhhhhccc-cCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechH
Q 006776 438 VEIEGECS--GYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTA 514 (631)
Q Consensus 438 ~~~~~g~~--Gel~v~~~~p~~~~gy~~~~~~~~~~~~~-~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~ 514 (631)
++++.|+. |+++. + +.++.|||++++.+...|.. ...+||+|||++++|++|++++.||.||+||.+|++|+|.
T Consensus 368 ~~~~~g~~~~g~l~~-~--~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~ 444 (533)
T PRK07798 368 NPVEPGSGEIGWIAR-R--GHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPE 444 (533)
T ss_pred CCCCCCCCCeeEEEe-e--cCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHH
Confidence 99998876 76664 5 57899999999877766543 2245999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchh
Q 006776 515 EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKI 594 (631)
Q Consensus 515 eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi 594 (631)
+||++|.++|.|.+++|++++++..++.+.++|+++++...+ .++|+++++++|+++++|..++++++||+|.+||+
T Consensus 445 eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~ 521 (533)
T PRK07798 445 EVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGARPD---LAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKA 521 (533)
T ss_pred HHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCCCC---HHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchh
Confidence 999999999999999999999887888999999988765444 67899999999999999999999999999999999
Q ss_pred hHHHHHHHHhc
Q 006776 595 MRRILRKIASR 605 (631)
Q Consensus 595 ~r~~l~~~~~~ 605 (631)
+|+.||++.++
T Consensus 522 ~~~~~~~~~~~ 532 (533)
T PRK07798 522 DYRWAKEQAAE 532 (533)
T ss_pred hHHHHhhhhcc
Confidence 99999998875
No 93
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=9.9e-64 Score=595.15 Aligned_cols=508 Identities=23% Similarity=0.252 Sum_probs=407.7
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
+.+.+.+.++++ .+|+++|++.. ..+++||+||+++++++|++|.+ ++++||+|+++++|++++++++|||++
T Consensus 615 ~~l~~~~~~~a~-~~p~~~a~~~~-----~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~ 687 (1146)
T PRK08633 615 PPLAEAWIDTAK-RNWSRLAVADS-----TGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLL 687 (1146)
T ss_pred CCHHHHHHHHHH-hcCCCcEEEcC-----CCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHH
Confidence 345567777777 79999999842 24689999999999999999987 489999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHH--HHHhhhcCCCccEEEEEecCCcccccc
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAA--LDECAKSGISVDVCLTYENQSAMTREN 210 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vi~~~~~~~~~~~~ 210 (631)
+|++++|+++..+.+++.+++++++++++++++.... .+... .... +....++..++...
T Consensus 688 ~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~----- 749 (1146)
T PRK08633 688 AGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLE---------KLKNKGFDLEL----PENVKVIYLEDLKA----- 749 (1146)
T ss_pred cCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHH---------HHhccCCchhc----ccCceEEEeehhcc-----
Confidence 9999999999999999999999999999998764321 11100 0011 22223333332110
Q ss_pred CcCCCCCccchhhhcccC--CC----CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcE
Q 006776 211 TKWQDGRDIWWQDVVPKY--PT----KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 284 (631)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~ 284 (631)
.... ...+.+..... +. ........++|+++|+|||||||.||+|+++|++++.+.. .....+++.++|+
T Consensus 750 -~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~-~~~~~~~~~~~d~ 825 (1146)
T PRK08633 750 -KISK--VDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIE-QISDVFNLRNDDV 825 (1146)
T ss_pred -ccch--hHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHH-HHHHhcCCCCCCE
Confidence 0000 00111111100 00 0001235679999999999999999999999999655443 3445678899999
Q ss_pred EEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCce
Q 006776 285 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSL 364 (631)
Q Consensus 285 ~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~l 364 (631)
+++.+|+.|..|+...++.+++.|+++++.+.. .+++.+++.++++++|++.++|++++.+.+... ..+.+++++
T Consensus 826 ~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l 900 (1146)
T PRK08633 826 ILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDP---TDALGIAKLVAKHRATILLGTPTFLRLYLRNKK--LHPLMFASL 900 (1146)
T ss_pred EEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCC---CCHHHHHHHHHHcCCeEEEecHHHHHHHHhccc--cCcccCCCe
Confidence 999999999999877788999999999987542 478999999999999999999999999987542 234567899
Q ss_pred eEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC--------CCCCCCCcCCCcCCCceEEeCC-
Q 006776 365 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--------WPQKPGSATFPFFGVQPVIVDE- 435 (631)
Q Consensus 365 r~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~--------~~~~~~~~G~p~~~~~~~i~d~- 435 (631)
|.+++||+++++++.+++++.++ +++++.||+||++++++...+.. ...+++++|+|+||++++|+|+
T Consensus 901 r~~~~gg~~~~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~ 977 (1146)
T PRK08633 901 RLVVAGAEKLKPEVADAFEEKFG---IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPE 977 (1146)
T ss_pred eeEEEcCCcCCHHHHHHHHHHhC---CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCC
Confidence 99999999999999999999987 78999999999987665433211 1135688999999999999995
Q ss_pred CCcccCCCcceeEEEecCCCcccccccCCchhhhhhccc-cCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechH
Q 006776 436 KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTA 514 (631)
Q Consensus 436 ~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~-~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~ 514 (631)
++++++.|+.|||+++| |+++.|||++++.+...+.. +.+|||+|||+|++|+||++++.||.||+||++|++|+|.
T Consensus 978 ~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~ 1055 (1146)
T PRK08633 978 TFEELPPGEDGLILIGG--PQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLG 1055 (1146)
T ss_pred CCccCCCCCceEEEEcC--CCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHH
Confidence 68999999999999999 99999999999887766542 2348999999999999999999999999999999999999
Q ss_pred HHHHHHhcCc--ccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHh-hcCCCccCceEEECCCCCCCCC
Q 006776 515 EVESALVSHP--QCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRS 591 (631)
Q Consensus 515 eIE~~l~~~~--~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~-~l~~~~~p~~i~~v~~lP~t~s 591 (631)
|||++|.+|| .+.+++|++++++..|+.++++++... .+ .+++++++++ .++++++|..+++++++|+|++
T Consensus 1056 eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~---~~---~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~ 1129 (1146)
T PRK08633 1056 AVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGA---ED---VEELKRAIKESGLPNLWKPSRYFKVEALPLLGS 1129 (1146)
T ss_pred HHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCc---cC---HHHHHHHHHhcCCCcccCCcEEEEecCcCCCCC
Confidence 9999999998 567899999999988999999988621 22 4567777765 6999999999999999999999
Q ss_pred chhhHHHHHHHHhc
Q 006776 592 GKIMRRILRKIASR 605 (631)
Q Consensus 592 GKi~r~~l~~~~~~ 605 (631)
||++|+.||++..+
T Consensus 1130 GKi~r~~L~~~~~~ 1143 (1146)
T PRK08633 1130 GKLDLKGLKELALA 1143 (1146)
T ss_pred CCCcHHHHHHHHHH
Confidence 99999999998654
No 94
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.9e-64 Score=645.44 Aligned_cols=498 Identities=19% Similarity=0.267 Sum_probs=411.5
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
+++++|.++++ .+|+++|+++. .+.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++
T Consensus 1575 ~~~~~~~~~a~-~~p~~~Av~~~------~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlka 1647 (3956)
T PRK12467 1575 LVHQLIEDQAA-ATPEAVALVFG------EQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKA 1647 (3956)
T ss_pred cHHHHHHHHHH-hCCCCeEEEeC------CcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhcc
Confidence 57889999988 79999999864 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|.++.+++.+++++++++++++++...... ... ... .++.++...
T Consensus 1648 G~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~-------------~~~----~~~-~~~~~~~~~--------- 1700 (3956)
T PRK12467 1648 GGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARL-------------PLP----DGL-RSLVLDQED--------- 1700 (3956)
T ss_pred CceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhC-------------ccc----cCC-cEEEecccc---------
Confidence 99999999999999999999999999999876432110 000 111 122222110
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.+ ........+.....+++++||+|||||||.||||+++|++++ +........+++.++|++++.++++|
T Consensus 1701 ------~~---~~~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~f 1770 (3956)
T PRK12467 1701 ------DW---LEGYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALV-NRLCATQEAYQLSAADVVLQFTSFAF 1770 (3956)
T ss_pred ------ch---hccCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHH-HHHHHHHHhcCCCcccEEEEecCccH
Confidence 00 001111112223567899999999999999999999999954 44445556788999999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..+. +.++.+|+.|+++++.+.... .++..+++.|+++++|++.++|++++.|.+... ...++++||.+++|||+
T Consensus 1771 d~~~-~~~~~~L~~G~~lvi~~~~~~-~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~---~~~~~~~lr~v~~gGe~ 1845 (3956)
T PRK12467 1771 DVSV-WELFWPLINGARLVIAPPGAH-RDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE---QVEHPLSLRRVVCGGEA 1845 (3956)
T ss_pred HHHH-HHHHHHHhCCCEEEEcChhhc-CCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc---ccccCCCceEEEEcccc
Confidence 8875 678999999999999865332 478999999999999999999999999987522 22357899999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCC---CCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEE
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---AWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCI 450 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~---~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v 450 (631)
+++++.+.+.+.++ ++.++|.||+||++..++..... .......++|+|+++++++|+|+++++++.|+.|||+|
T Consensus 1846 l~~~~~~~~~~~~~--~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~~GEl~i 1923 (3956)
T PRK12467 1846 LEVEALRPWLERLP--DTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGVAGELYL 1923 (3956)
T ss_pred CCHHHHHHHHHhCC--CCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCCceEEEe
Confidence 99999999999887 46799999999998655432211 11123568999999999999999999999999999999
Q ss_pred ecCCCcccccccCCchhhhhhcccc-----CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcc
Q 006776 451 KSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 525 (631)
Q Consensus 451 ~~~~p~~~~gy~~~~~~~~~~~~~~-----~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~ 525 (631)
+| |+++.||+++++.+...|... ..+||+|||+|++++||.++++||.||+||++|+||+|.|||++|.+||+
T Consensus 1924 ~G--~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~ 2001 (3956)
T PRK12467 1924 GG--VGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGG 2001 (3956)
T ss_pred cc--ccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCC
Confidence 99 999999999999888777432 23599999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeeecCCCCeeEEEEEEeCCCCCCc-----HHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 526 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS-----EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 526 V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
|.+|+|++.+ ...++.++++|+..++.... ....++|++++++.|+.|++|..++++++||+|+|||++|++|+
T Consensus 2002 V~~a~vv~~~-~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~GKidr~~L~ 2080 (3956)
T PRK12467 2002 VREAVVIAQD-GANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMPLTPNGKLDRKALP 2080 (3956)
T ss_pred cceEEEEEec-CCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCCCCCCCCcchhhCC
Confidence 9999999986 44677899999876543211 12356899999999999999999999999999999999999998
Q ss_pred HHHhc
Q 006776 601 KIASR 605 (631)
Q Consensus 601 ~~~~~ 605 (631)
+....
T Consensus 2081 ~~~~~ 2085 (3956)
T PRK12467 2081 APDAS 2085 (3956)
T ss_pred CCccc
Confidence 75543
No 95
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-64 Score=561.01 Aligned_cols=520 Identities=19% Similarity=0.225 Sum_probs=384.5
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcC-----------CC----------CceeeecHHHHHHHHHHHHHHHHHCCCCCCCE
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEAN-----------DP----------GVDATLTYSQLLQQVCQLANYLKDIGVKKGDA 112 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~-----------~~----------~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~ 112 (631)
+++++|.++++ .+|+++|+.+... .+ +..+.+||+||.++++++|++|.++|+++||+
T Consensus 70 t~~~~~~~~~~-~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~ 148 (700)
T PTZ00216 70 NFLQRLERICK-ERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSN 148 (700)
T ss_pred CHHHHHHHHHH-hCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 57899999998 8999999998421 10 13689999999999999999999999999999
Q ss_pred EEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCC
Q 006776 113 VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI 192 (631)
Q Consensus 113 V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (631)
|+|+++|+++|++++|||+++|++++|+++.++.+++.++|++++++++|++.... ..+....... ..+
T Consensus 149 V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~---------~~l~~~~~~~--~~~ 217 (700)
T PTZ00216 149 VAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV---------PNLLRLMKSG--GMP 217 (700)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH---------HHHHHhhhhc--cCC
Confidence 99999999999999999999999999999999999999999999999999975321 1111111110 002
Q ss_pred CccEEEEEecCCccccccCcCCCCCccchhhhcccC---CCCC-CceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHH
Q 006776 193 SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY---PTKC-EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH 268 (631)
Q Consensus 193 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~ 268 (631)
. ..++.++.... ...........|.++.... .... ......++++++|+|||||||.||||++||++++.+
T Consensus 218 ~-~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 218 N-TTIIYLDSLPA----SVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred c-eEEEEECCCcc----ccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 2 24444433211 0000111234565554332 1111 112346799999999999999999999999997655
Q ss_pred HHHHHHH---hcC-CCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHH-------HHHHhCCcE
Q 006776 269 TATTFKY---AFD-YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWD-------IVDKYKVTI 337 (631)
Q Consensus 269 ~~~~~~~---~~~-~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~-------~i~~~~vt~ 337 (631)
....... .++ +.++|++++++|++|+++... ....+..|+++.+. ++..+++ .++++++|+
T Consensus 293 ~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~-------~~~~l~~~~~~~~~~l~~~~pT~ 364 (700)
T PTZ00216 293 ILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG-------SPRTLTDTFARPHGDLTEFRPVF 364 (700)
T ss_pred HHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC-------CHHHhhhhhccccchHHHcCCcE
Confidence 4433221 122 467899999999999988643 34456677766552 3344444 688999999
Q ss_pred EeecHHHHHHHHhcCCccc---------------------------------------cccCCCceeEEEEccCCCCHhH
Q 006776 338 FYTAPTLVRSLMRDGNEYV---------------------------------------TRYSRKSLRVLGSVGEPINPSA 378 (631)
Q Consensus 338 l~~~P~~l~~l~~~~~~~~---------------------------------------~~~~l~~lr~v~~~Ge~l~~~~ 378 (631)
+.++|++++.+.+...... .....+++|.+++||+++++++
T Consensus 365 ~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~ 444 (700)
T PTZ00216 365 LIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAAT 444 (700)
T ss_pred EEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHH
Confidence 9999999998865311000 0000158999999999999999
Q ss_pred HHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCc--ccCCCcceeEEEecCCCc
Q 006776 379 WRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGV--EIEGECSGYLCIKSSWPG 456 (631)
Q Consensus 379 ~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~--~~~~g~~Gel~v~~~~p~ 456 (631)
.+++...++ ++++.||+||+++..+...++ ....+++|+|++|++++|+|+++. ..+++..|||+|+| |+
T Consensus 445 ~~~~~~~~~----~l~~~YG~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG--~~ 516 (700)
T PTZ00216 445 QEFVNVVFG----MVIQGWGLTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRG--PF 516 (700)
T ss_pred HHHHHHHhh----hHhhccCcccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcC--Cc
Confidence 988777653 799999999998765544332 246789999999999999998652 23445679999999 99
Q ss_pred ccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEe-cCceeechHHHHHHHhcCcccceE--EEEe
Q 006776 457 AFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN-VSGHRIGTAEVESALVSHPQCAEA--AVVG 533 (631)
Q Consensus 457 ~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~-~~G~~i~~~eIE~~l~~~~~V~~~--~vv~ 533 (631)
++.|||++++.+...|.. +|||+|||+|++|+||+++|+||+||+|| .+|++|+|.+||+++.+||.|.++ +|++
T Consensus 517 v~~GY~~~pe~T~~~f~~--dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~ 594 (700)
T PTZ00216 517 LFKGYYKQEELTREVLDE--DGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLV 594 (700)
T ss_pred ccchhcCChhHhhhhccc--cCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEE
Confidence 999999999999888754 79999999999999999999999999998 789999999999999999999973 3443
Q ss_pred eecCCCCeeEEEEEEeCCC----------CC-------CcHHHHHHHHHHHH-----hhcCCCccCceEEECC------C
Q 006776 534 VEHEVKGQGIYAFVTLVEG----------VP-------YSEELRKSLVLAVR-----KQIGAFAAPDKIHWAP------G 585 (631)
Q Consensus 534 ~~~~~~~~~~~~~v~~~~~----------~~-------~~~~~~~~i~~~~~-----~~l~~~~~p~~i~~v~------~ 585 (631)
.++ ...++++|+++.. .. .+.++.+.+.+.+. +.+..+..++.|++++ .
T Consensus 595 ~~~---~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~ 671 (700)
T PTZ00216 595 HPA---RSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPEN 671 (700)
T ss_pred ecC---CceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCC
Confidence 322 3568888886531 00 01223333333332 3577888999988874 2
Q ss_pred CCCCCCchhhHHHHHHHHhcCcCCCC
Q 006776 586 LPKTRSGKIMRRILRKIASRQLDELG 611 (631)
Q Consensus 586 lP~t~sGKi~r~~l~~~~~~~~~~~~ 611 (631)
=-.|+++|+.|+.+++.|.+.+++++
T Consensus 672 g~lT~t~K~~R~~i~~~y~~~i~~ly 697 (700)
T PTZ00216 672 GVLTAAMKLKRRVIDERYADLIKELF 697 (700)
T ss_pred CCCChhhccchHHHHHHHHHHHHHHh
Confidence 34699999999999999998876665
No 96
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=7.4e-63 Score=542.61 Aligned_cols=518 Identities=20% Similarity=0.264 Sum_probs=397.4
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
....+++++. .+|+++|+++. ...+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 22 ~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G 94 (567)
T PLN02479 22 PLWFLERAAV-VHPTRKSVVHG------SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAG 94 (567)
T ss_pred HHHHHHHHHh-hCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCC
Confidence 4566777777 79999999863 3579999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhc---CCCccEEEEEecCCccccccC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKS---GISVDVCLTYENQSAMTRENT 211 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~vi~~~~~~~~~~~~~ 211 (631)
++++|+++.++.+++.++++.++++++|+++... +...++...+... ......++++...........
T Consensus 95 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (567)
T PLN02479 95 AVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFF---------TLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQ 165 (567)
T ss_pred cEEEEeccccCHHHHHHHHhhcCceEEEEchhhh---------hHHHHHHHHHhhcccccCCCceEEEecCCcCCccccc
Confidence 9999999999999999999999999999986542 1122222221100 011223343332110000000
Q ss_pred cCCCCCccchhhhcccCCCCCC-ceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecc
Q 006776 212 KWQDGRDIWWQDVVPKYPTKCE-VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTAD 290 (631)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 290 (631)
.....+...|.+++........ ......+++++++|||||||.||||+++|++++..... ....+++.+++++++.+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~-~~~~~~~~~~~~~~~~~p 244 (567)
T PLN02479 166 YALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALS-NALIWGMNEGAVYLWTLP 244 (567)
T ss_pred cccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHH-HHhhcCCCCCCEEEEecc
Confidence 0001123345555443221111 11223457888999999999999999999986544332 233567888999999999
Q ss_pred cceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEc
Q 006776 291 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 370 (631)
Q Consensus 291 ~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~ 370 (631)
++|..+....+...++.|.++++. . +++..+++.++++++|++.++|+++..|.+.... ....++++++.++++
T Consensus 245 ~~h~~~~~~~~~~~~~~g~~~~~~-~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~~~l~~~~~~ 318 (567)
T PLN02479 245 MFHCNGWCFTWTLAALCGTNICLR-Q----VTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKS-ETILPLPRVVHVMTA 318 (567)
T ss_pred hhhhhhHHHHHHHHhhcCceEecc-C----CCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhh-cccccccceeEEEEc
Confidence 999988655444455666665553 2 4899999999999999999999999999875321 111256899999999
Q ss_pred cCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCC---------CCCCCCCCcCCCcCCCc-eEEeC-CCCcc
Q 006776 371 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---------AWPQKPGSATFPFFGVQ-PVIVD-EKGVE 439 (631)
Q Consensus 371 Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~---------~~~~~~~~~G~p~~~~~-~~i~d-~~g~~ 439 (631)
|+++++.+++++.+. + +++++.||+||+++..+..... .......+.|.+.+|+. ++|+| +++++
T Consensus 319 G~~~~~~~~~~~~~~-~---~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~ 394 (567)
T PLN02479 319 GAAPPPSVLFAMSEK-G---FRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKP 394 (567)
T ss_pred CCCCCHHHHHHHHhc-C---CceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcc
Confidence 999999999988765 4 7899999999996543321100 00011235678888875 88999 46888
Q ss_pred cCCC--cceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHH
Q 006776 440 IEGE--CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVE 517 (631)
Q Consensus 440 ~~~g--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE 517 (631)
++.+ +.|||+++| ++++.|||++++.+...+. +|||+|||++++|++|+++++||.||+||++|++|+|.|||
T Consensus 395 ~~~~g~~~GEl~v~g--~~~~~GY~~~~~~t~~~~~---~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE 469 (567)
T PLN02479 395 VPADGKTMGEIVMRG--NMVMKGYLKNPKANEEAFA---NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVE 469 (567)
T ss_pred cCCCCCCceEEEEec--cchhhhhhcCcccccchhc---CCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHH
Confidence 8653 679999999 8999999999988877764 68999999999999999999999999999999999999999
Q ss_pred HHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCc--HHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhh
Q 006776 518 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS--EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 595 (631)
Q Consensus 518 ~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~ 595 (631)
++|.+||.|.+++|++.+++..++.+++++++.++...+ +...++|.++++++|+++++|+.+++ ++||+|++||++
T Consensus 470 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~ 548 (567)
T PLN02479 470 NVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQ 548 (567)
T ss_pred HHHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCee
Confidence 999999999999999998887788999999987664321 34567899999999999999998876 679999999999
Q ss_pred HHHHHHHHhc
Q 006776 596 RRILRKIASR 605 (631)
Q Consensus 596 r~~l~~~~~~ 605 (631)
|+.|++.+..
T Consensus 549 r~~L~~~~~~ 558 (567)
T PLN02479 549 KHVLRAKAKE 558 (567)
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 97
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.9e-63 Score=529.71 Aligned_cols=430 Identities=19% Similarity=0.200 Sum_probs=355.4
Q ss_pred eecHHHHHHHHHHHHHHHHHCCC-CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 006776 85 TLTYSQLLQQVCQLANYLKDIGV-KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVIT 163 (631)
Q Consensus 85 ~~Ty~eL~~~v~~~A~~L~~~Gv-~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 163 (631)
-+.|+||.+++.++|++|++.|+ ++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 46899999999999999999998 57999999999999999999999999999999999999999999999999999998
Q ss_pred eCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCCCCCCceecCCCCCe
Q 006776 164 SNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPL 243 (631)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (631)
++..... . .... . .. .....+++++
T Consensus 99 ~~~~~~~---------------------~-------~~~~----------------------~--~~---~~~~~~~~~~ 123 (452)
T PRK07445 99 LDQLKLS---------------------H-------PPPL----------------------P--SQ---GILPNLETGW 123 (452)
T ss_pred cCccccc---------------------c-------CCCC----------------------C--cc---ccCCCCCCcE
Confidence 6542100 0 0000 0 00 0013468999
Q ss_pred EEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCCh
Q 006776 244 FLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDS 323 (631)
Q Consensus 244 ~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~ 323 (631)
+++|||||||.||||++||++++.+.... ...+++.+ ++.++.+|++|.+|+ ..++.+++.|+++++.+.. ..
T Consensus 124 ~i~~TSGTTG~PKgV~~t~~~l~~~~~~~-~~~~~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~----~~ 196 (452)
T PRK07445 124 IMIPTGGSSGQIRFAIHTWETLTASVQGF-QRYFQLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYK----RL 196 (452)
T ss_pred EEEeCCCCCCCCcEEEechHHHHHHHHHH-HHHhcCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChH----hc
Confidence 99999999999999999999965544333 33455654 457888999999987 5677889999999987532 11
Q ss_pred hHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccccccccc
Q 006776 324 GRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETG 403 (631)
Q Consensus 324 ~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g 403 (631)
........+++++++.++|++++.+++.. ...++++|.+++||+++++++.+.+.+ ++ +++++.||+||++
T Consensus 197 ~~~~~~~~~~~~t~~~~vP~~l~~l~~~~-----~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~---~~l~~~YG~TE~~ 267 (452)
T PRK07445 197 KSGQELPPNPSDFFLSLVPTQLQRLLQLR-----PQWLAQFRTILLGGAPAWPSLLEQARQ-LQ---LRLAPTYGMTETA 267 (452)
T ss_pred cchhhhhhhcCceEEEehHHHHHHHHhhC-----hhhhhcceEEEECCccCCHHHHHHHHh-cC---CeEecCcchhhhc
Confidence 22233445788999999999999998732 224789999999999999999988765 34 7899999999998
Q ss_pred ceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecC
Q 006776 404 GFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTG 483 (631)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TG 483 (631)
..++...+.......+++|+|+|+++++|+ .|+.|||+|++ |.++.|||++.. ..+|||+||
T Consensus 268 ~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~--------~g~~Gel~v~g--~~~~~gY~~~~~--------~~~g~~~TG 329 (452)
T PRK07445 268 SQIATLKPDDFLAGNNSSGQVLPHAQITIP--------ANQTGNITIQA--QSLALGYYPQIL--------DSQGIFETD 329 (452)
T ss_pred ccccccCchhhccCCCcCCccCCCCeEEEc--------CCCcceEEEeC--CccchhhcCCcc--------CCCCEEECC
Confidence 655433333222346789999999999997 35679999999 999999998542 136899999
Q ss_pred ceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHH
Q 006776 484 DGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSL 563 (631)
Q Consensus 484 Dl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i 563 (631)
|+|++|+||++++.||.||+||++|++|+|.|||++|.+||+|.+|+|++++++..|+.++++|+..++. .+ .+++
T Consensus 330 Dl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~-~~---~~~l 405 (452)
T PRK07445 330 DLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPS-IS---LEEL 405 (452)
T ss_pred CEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCC-CC---HHHH
Confidence 9999999999999999999999999999999999999999999999999999988899999999987653 23 5689
Q ss_pred HHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCc
Q 006776 564 VLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 607 (631)
Q Consensus 564 ~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~ 607 (631)
+++|+++|+++++|+.++++++||+|++||++|+.|++++.+++
T Consensus 406 ~~~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 449 (452)
T PRK07445 406 KTAIKDQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRL 449 (452)
T ss_pred HHHHHHhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998764
No 98
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.5e-63 Score=648.71 Aligned_cols=492 Identities=21% Similarity=0.263 Sum_probs=409.1
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
+++++|.+++. .+|+++|+++. .+.+||+||++++.++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 2004 ~~~~~~~~~a~-~~p~~~A~~~~------~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~a 2076 (5163)
T PRK12316 2004 GVHQRIAEQAA-RAPEAIAVVFG------DQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKA 2076 (5163)
T ss_pred CHHHHHHHHHH-hCCCCeEEEcC------CCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhh
Confidence 56788998888 79999999864 468999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|.++.+++.+++++++++++++++....... .. ..+. ++.+....
T Consensus 2077 Ga~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~-------------~~----~~~~-~~~~~~~~--------- 2129 (5163)
T PRK12316 2077 GGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLP-------------LP----AGVA-RLPLDRDA--------- 2129 (5163)
T ss_pred ceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcc-------------cc----cccc-eEeccchh---------
Confidence 999999999999999999999999999999765321100 00 1111 11111000
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
.+.+ .+...+.....+++++||+|||||||.||||+++|++++. ........+++.++|+++..++++|
T Consensus 2130 ------~~~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~f 2198 (5163)
T PRK12316 2130 ------EWAD----YPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVA-HCQAAGERYELSPADCELQFMSFSF 2198 (5163)
T ss_pred ------hhhc----cCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHH-HHHHHHHhcCCCCcceEEEecCchH
Confidence 0000 0111122235689999999999999999999999999554 4444555788999999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..+. ..++.+|+.|+++++.+.. ..++..+++.|+++++|++.++|++++.|.+.... .....+||.+++|||+
T Consensus 2199 d~~~-~~~~~~L~~G~~~~~~~~~--~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---~~~~~~lr~~~~gGe~ 2272 (5163)
T PRK12316 2199 DGAH-EQWFHPLLNGARVLIRDDE--LWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAER---DGRPPAVRVYCFGGEA 2272 (5163)
T ss_pred HHHH-HHHHHHHhCCCEEEeCCcc--cCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhc---ccCCcceeEEEEeccc
Confidence 8664 6789999999999776532 24888999999999999999999999999875432 1123589999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCC---CCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEE
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAW---PQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCI 450 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~---~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v 450 (631)
+++++.+.+.+.++ +..++|.||+||++..++....... .....++|+|+++++++|+|+++++++.|+.|||+|
T Consensus 2273 l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~g~~GEl~i 2350 (5163)
T PRK12316 2273 VPAASLRLAWEALR--PVYLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILDADLNLLAPGMAGELYL 2350 (5163)
T ss_pred CCHHHHHHHHHhCC--CcEEEECccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEECCCCCCCCCCCeeEEEe
Confidence 99999999998876 4789999999999865543221111 112257999999999999999999999999999999
Q ss_pred ecCCCcccccccCCchhhhhhcccc-----CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcc
Q 006776 451 KSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQ 525 (631)
Q Consensus 451 ~~~~p~~~~gy~~~~~~~~~~~~~~-----~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~ 525 (631)
+| |+++.|||++++.+.+.|... .++||+|||+|++++||.++++||+||+||++|+||+|.|||++|.+||+
T Consensus 2351 ~G--~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~ 2428 (5163)
T PRK12316 2351 GG--EGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPA 2428 (5163)
T ss_pred cc--hhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcc
Confidence 99 999999999999888887532 24599999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHh
Q 006776 526 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 526 V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~ 604 (631)
|.+++|++.++. .++.+++||+..++.... .+++++++++.|+.|++|..+++++.||+|+|||++|++|++...
T Consensus 2429 v~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~---~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 2503 (5163)
T PRK12316 2429 VREAVVVAQDGA-SGKQLVAYVVPDDAAEDL---LAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPDV 2503 (5163)
T ss_pred cceEEEEEEecC-CCeEEEEEEEecCCCccC---HHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCcc
Confidence 999999998766 778999999988765443 678999999999999999999999999999999999999987543
No 99
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-63 Score=551.83 Aligned_cols=528 Identities=18% Similarity=0.201 Sum_probs=389.5
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.+.++|++++. .+|+++|+++.+...+..+.+||+||.++++++|++|.++|+++||+|+++++|++++++++|||+++
T Consensus 50 ~l~~~l~~~a~-~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~ 128 (624)
T PRK12582 50 SIPHLLAKWAA-EAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQA 128 (624)
T ss_pred CHHHHHHHHHH-HCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 46678888887 79999999875321133579999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCH-----HHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccc
Q 006776 134 GAVHSVVFAGFSS-----DSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 208 (631)
Q Consensus 134 G~v~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 208 (631)
|++++|++|.++. +++.++++.++++++|+++... ....+..+.. ..++ ++++.....
T Consensus 129 G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----------~~~~~~~~~~--~~~~-~i~~~~~~~--- 191 (624)
T PRK12582 129 GVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP-----------FARALAALDL--LDVT-VVHVTGPGE--- 191 (624)
T ss_pred CCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH-----------HHHHHHhhhh--cCce-EEEEcCCCc---
Confidence 9999999999885 9999999999999999876421 1111111110 1222 233321110
Q ss_pred ccCcCCCCCccchhhhcccCCCC---CCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCC---C
Q 006776 209 ENTKWQDGRDIWWQDVVPKYPTK---CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKP---S 282 (631)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~---~ 282 (631)
......+.++....... .......++++++|+|||||||.||||+++|++++.+.... .......+ .
T Consensus 192 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~-~~~~~~~~~~~~ 264 (624)
T PRK12582 192 ------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQ-EQLRPREPDPPP 264 (624)
T ss_pred ------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHH-HHhccccCCCCC
Confidence 00112233333221111 11123457899999999999999999999999966554433 22333333 5
Q ss_pred cEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCc--cccccC
Q 006776 283 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE--YVTRYS 360 (631)
Q Consensus 283 d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~~~ 360 (631)
++++..+|++|.+|+...++.++..|+++++.++.+.......+++.++++++|++.++|++++.|++.... .....+
T Consensus 265 ~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~ 344 (624)
T PRK12582 265 PVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSF 344 (624)
T ss_pred ceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHH
Confidence 799999999999998777788899999999976432211234567778899999999999999998764321 112235
Q ss_pred CCceeEEEEccCCCCHhHHHHHHHHh----CCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCC
Q 006776 361 RKSLRVLGSVGEPINPSAWRWFFNVV----GDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEK 436 (631)
Q Consensus 361 l~~lr~v~~~Ge~l~~~~~~~~~~~~----~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~ 436 (631)
+++||.+++||+++++++.+++.+.+ |. ++++++.||+||+++++...... ..+++++|+|+||+++++++
T Consensus 345 ~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~~-- 419 (624)
T PRK12582 345 FKNLRLMAYGGATLSDDLYERMQALAVRTTGH-RIPFYTGYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLAP-- 419 (624)
T ss_pred hhheeEEEecCCCCCHHHHHHHHHHHHhhcCC-CceEEeccccccccceeecccCC--CCCCCCCCcCCCCcEEEEcc--
Confidence 78999999999999999999998863 32 36899999999998765532222 24678999999999999863
Q ss_pred CcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEE-c---cCCeEEEEeecCCeEec-Cceee
Q 006776 437 GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSR-D---KDGYHWLTGRVDDVINV-SGHRI 511 (631)
Q Consensus 437 g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~-~---~dG~l~i~GR~dd~i~~-~G~~i 511 (631)
.|+.|||+|+| |+++.|||++++.+...|.. +|||+|||+|++ | ++|+++|+||+||+||+ +|++|
T Consensus 420 -----~G~~GEl~vrg--~~v~~GY~~~p~~t~~~f~~--dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i 490 (624)
T PRK12582 420 -----VGDKYEVRVKG--PNVTPGYHKDPELTAAAFDE--EGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWV 490 (624)
T ss_pred -----CCCceEEEEEC--CcccccccCCccchhhhcCc--cCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEe
Confidence 46789999999 89999999999887776643 799999999998 4 46999999999999996 59999
Q ss_pred chHHHH--HHHhcCcccceEEEEeeecCCCCeeEEEE------EEeCCCCC-----CcHHHHHHHHHHH---HhhcCCCc
Q 006776 512 GTAEVE--SALVSHPQCAEAAVVGVEHEVKGQGIYAF------VTLVEGVP-----YSEELRKSLVLAV---RKQIGAFA 575 (631)
Q Consensus 512 ~~~eIE--~~l~~~~~V~~~~vv~~~~~~~~~~~~~~------v~~~~~~~-----~~~~~~~~i~~~~---~~~l~~~~ 575 (631)
+|.+|| .++.+||.|.+++|+|++++..++.++.- ++..++.. ..+++.+.+.+.+ ++.++.+.
T Consensus 491 ~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~ 570 (624)
T PRK12582 491 SVGTLRPDAVAACSPVIHDAVVAGQDRAFIGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSS 570 (624)
T ss_pred chHHHHHHHHHhcCcchheEEEEcCCCCcEEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCCh
Confidence 998885 67889999999999999877655432210 11111110 1123333333333 34466666
Q ss_pred -cCceEEECCCCCC------CCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHH
Q 006776 576 -APDKIHWAPGLPK------TRSGKIMRRILRKIASRQLDELGDTSTLADPGVV 622 (631)
Q Consensus 576 -~p~~i~~v~~lP~------t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 622 (631)
+|+.+.+++++|+ |++||+.|+.+.+.|.+++++++. +...||++
T Consensus 571 ~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ly~--~~~~~~~~ 622 (624)
T PRK12582 571 SRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVERLYA--EPPGPDVI 622 (624)
T ss_pred hheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHHHhc--CCCCCCcc
Confidence 9999999998875 567889999999999999988885 34666654
No 100
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.4e-63 Score=522.42 Aligned_cols=517 Identities=22% Similarity=0.302 Sum_probs=384.5
Q ss_pred cccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHH
Q 006776 45 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 124 (631)
Q Consensus 45 ~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~ 124 (631)
.|..=...+.+..++.+++. .+|+.+|+.+... +..+.+||+|+++++.++|++|.++|++.||+|+|++.|+++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~--~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~ 84 (613)
T COG1022 8 AWEDVAEIHTLPKRLAERVK-DRPDGVALMYKEL--GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWA 84 (613)
T ss_pred cchhhhhcccHHHHHHHHhh-cCCcceeEeeecC--CcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH
Confidence 44444445556677777777 6888888887652 67899999999999999999999999977999999999999999
Q ss_pred HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEe---
Q 006776 125 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYE--- 201 (631)
Q Consensus 125 v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~--- 201 (631)
++.+||+.+|++.||+.++++++++.++|++++++++|+++.... +.+......+ +.+.......
T Consensus 85 i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~--------~~~~~~~~~~----~~~~~~~~~~~~~ 152 (613)
T COG1022 85 IADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELL--------DLVLPVLEDC----PKVVDLIVIIDLV 152 (613)
T ss_pred HHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHH--------HHHHhhhccc----cchhhhhhhhhhh
Confidence 999999999999999999999999999999999999999875432 2222222211 1111110000
Q ss_pred -cCCccccccCcCCC--CCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC
Q 006776 202 -NQSAMTRENTKWQD--GRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 278 (631)
Q Consensus 202 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~ 278 (631)
...... ...+.. .....+. ............+..++|+|.|+|||||||.||||++||+|++.+.... .....
T Consensus 153 ~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~-~~~~~ 228 (613)
T COG1022 153 REAVEAK--ALVLEVFPDEGISLF-LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGI-DEVLP 228 (613)
T ss_pred hhccchh--hccccccccccchhh-hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHH-HhhCC
Confidence 000000 000000 0011111 1111111112245679999999999999999999999999966665544 44565
Q ss_pred -CCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCcc--
Q 006776 279 -YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY-- 355 (631)
Q Consensus 279 -~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~-- 355 (631)
++++|++++++|+.|++...+.....+..|+++... .++..+++.+++++||+++++|.+++.+.+...+.
T Consensus 229 ~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~------~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~ 302 (613)
T COG1022 229 PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK------EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVA 302 (613)
T ss_pred CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec------CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHH
Confidence 889999999999999998765433434444444333 37899999999999999999999999884321100
Q ss_pred ---------------------------------------------ccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCC
Q 006776 356 ---------------------------------------------VTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSR 390 (631)
Q Consensus 356 ---------------------------------------------~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~ 390 (631)
.+... .++|.+++||++|++++..+++.. +
T Consensus 303 ~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l----G 377 (613)
T COG1022 303 KAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL----G 377 (613)
T ss_pred hcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc----C
Confidence 00111 479999999999999998887765 4
Q ss_pred cceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhh
Q 006776 391 CPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYET 470 (631)
Q Consensus 391 ~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~ 470 (631)
+++.++||+||+++..+.+.++. ...+++|.|+|+++++|+| .|||+|+| |++|.|||++++.+.+
T Consensus 378 i~i~eGYGlTEts~~~~v~~~~~--~~~gtvG~p~p~~evKI~d----------~GEilVRG--~~Vm~GYyk~pe~Tae 443 (613)
T COG1022 378 IPILEGYGLTETSAVVSVNPPDR--FVLGTVGKPLPGIEVKIAD----------DGEILVRG--PNVMKGYYKNPEATAE 443 (613)
T ss_pred CCeEEEecccccccceEEccccC--cccCCcCCcCCCceEEEcc----------CceEEEec--chhcchhcCChHHHhh
Confidence 99999999999999888776654 6889999999999999998 39999999 9999999999999999
Q ss_pred hccccCCCeEecCceEEEccCCeEEEEeecCCeEecC-ceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEe
Q 006776 471 TYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 549 (631)
Q Consensus 471 ~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~-G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~ 549 (631)
.+.. +|||+|||+|.+|++|+|+|+||++|+||.+ |++|.|..||+.+.++|.|.+++|+| .+ ...+.|.|++
T Consensus 444 af~~--DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~---k~~~~AlIvp 517 (613)
T COG1022 444 AFTE--DGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DD---KKFLVALIVP 517 (613)
T ss_pred hccc--cCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cC---CcceEEEEeC
Confidence 9986 8999999999999999999999999999996 99999999999999999999999998 22 2347788887
Q ss_pred CCCCC------------C-------cHHHHHHHHHHHHhh---cCCCccCceEEECC-CC-----CCCCCchhhHHHHHH
Q 006776 550 VEGVP------------Y-------SEELRKSLVLAVRKQ---IGAFAAPDKIHWAP-GL-----PKTRSGKIMRRILRK 601 (631)
Q Consensus 550 ~~~~~------------~-------~~~~~~~i~~~~~~~---l~~~~~p~~i~~v~-~l-----P~t~sGKi~r~~l~~ 601 (631)
+.+.- . +..+.+.+...+.+. +..+..+..+.+.+ ++ -.|++=|+.|..+.+
T Consensus 518 ~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~ 597 (613)
T COG1022 518 DFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILD 597 (613)
T ss_pred CHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHH
Confidence 54210 0 122233333333322 23344555444433 33 357888999999999
Q ss_pred HHhcCcCCCC
Q 006776 602 IASRQLDELG 611 (631)
Q Consensus 602 ~~~~~~~~~~ 611 (631)
.+.+.++..+
T Consensus 598 ~~~~~i~~~y 607 (613)
T COG1022 598 RYKDEIEAVY 607 (613)
T ss_pred hhhhHHHHHh
Confidence 9988765554
No 101
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-61 Score=527.42 Aligned_cols=488 Identities=21% Similarity=0.266 Sum_probs=391.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEE
Q 006776 83 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 162 (631)
Q Consensus 83 ~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii 162 (631)
.+.+||.||.++++++|++|.++|+++||+|+++++|++++++++|||+++|++++++++.++.+++.++++.++|++++
T Consensus 9 ~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~ 88 (509)
T PRK12406 9 DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLI 88 (509)
T ss_pred CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcc----ccc-cCcCCCCCccchhhhcccCCCCCCceec
Q 006776 163 TSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAM----TRE-NTKWQDGRDIWWQDVVPKYPTKCEVEWV 237 (631)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (631)
++..... .+.+ .. +....++........ ... ...........|.+.....+. ....
T Consensus 89 ~~~~~~~---------~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 149 (509)
T PRK12406 89 AHADLLH---------GLAS---AL----PAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP---YDGP 149 (509)
T ss_pred Eccchhh---------hhhh---hh----hcccceeecccccccccccccccccccCCCCccCHHHHhcccCc---cCCC
Confidence 8764321 1111 11 110111111100000 000 000011122334443322111 1223
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHHH--HHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEec
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 315 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~ 315 (631)
..+++++++|||||||.||+|.++|..+.... .......+++.++++++...|++|..+..+. +.++..|+++++.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~~~~~g~~~~~~~ 228 (509)
T PRK12406 150 PVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYG-LRAGRLGGVLVLQP 228 (509)
T ss_pred CCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHH-HHHHhhheEEEEcc
Confidence 57899999999999999999999876532221 2223346788999999999999998876544 45678899988875
Q ss_pred CCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceec
Q 006776 316 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD 395 (631)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~ 395 (631)
. .+++.+++.++++++|++.++|++++.|++.........+++++|.+++||+++++++++++.+.++ +.+++
T Consensus 229 ~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~---~~~~~ 301 (509)
T PRK12406 229 R----FDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWG---PVIYE 301 (509)
T ss_pred C----CCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcC---CcEEe
Confidence 3 3789999999999999999999999999876543334567899999999999999999999999887 67999
Q ss_pred ccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccc-cccCCchhhhhhccc
Q 006776 396 TWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFR-TLYGDHERYETTYFK 474 (631)
Q Consensus 396 ~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~-gy~~~~~~~~~~~~~ 474 (631)
.||+||++.+.+.... .....++++|.|+++++++++|+++++++.|+.|||++++ ++++. +|+++++.+....
T Consensus 302 ~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~--~~~~~~~y~~~~~~~~~~~-- 376 (509)
T PRK12406 302 YYGSTESGAVTFATSE-DALSHPGTVGKAAPGAELRFVDEDGRPLPQGEIGEIYSRI--AGNPDFTYHNKPEKRAEID-- 376 (509)
T ss_pred eccccccCceEecCcc-cccccCCCcCccCCCcEEEEECCCCCCCCCCCceEEEEEC--CccccccccCCchhccccc--
Confidence 9999999976553322 2234568899999999999999999999999999999999 77764 8998887654432
Q ss_pred cCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCC
Q 006776 475 PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP 554 (631)
Q Consensus 475 ~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~ 554 (631)
.+|||+|||++++++||++++.||.||+||++|.+|+|.+||++|.++|+|.++++++.++...++.++++|++.++..
T Consensus 377 -~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 455 (509)
T PRK12406 377 -RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGAT 455 (509)
T ss_pred -CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCC
Confidence 3789999999999999999999999999999999999999999999999999999999998877888999999876554
Q ss_pred CcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcC
Q 006776 555 YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 555 ~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
.+ .++|++.+++.++++++|..++++++||+|.+||++|+.|++.+...
T Consensus 456 ~~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 456 LD---EADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred CC---HHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhh
Confidence 33 57899999999999999999999999999999999999999987654
No 102
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-61 Score=531.84 Aligned_cols=515 Identities=21% Similarity=0.303 Sum_probs=404.9
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
.+.++|+++++ .+|+++|++.. .+.+||.||.++++++|.+|.+ .|+++||+|+++++|++++++++|||++
T Consensus 24 ~l~~~l~~~a~-~~p~~~a~~~~------~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 96 (560)
T PRK08974 24 SLVDMFEQAVA-RYADQPAFINM------GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILR 96 (560)
T ss_pred cHHHHHHHHHH-hCCCCceEEEC------CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 46688888887 79999999853 4689999999999999999984 8999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccccc--
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN-- 210 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-- 210 (631)
+|++++|++|.++.+++.++++.++++++++++... +.+.++... ...+.++............
T Consensus 97 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 162 (560)
T PRK08974 97 AGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFA---------HTLEKVVFK-----TPVKHVILTRMGDQLSTAKGT 162 (560)
T ss_pred cCcEEeccCccCCHHHHHHHHHhcCceEEEEecccc---------HHHHHHhhh-----cCcceEEEecccccccccccc
Confidence 999999999999999999999999999999876432 122222111 1222222111000000000
Q ss_pred ------------Cc-CCCCCccchhhhcccCCC-CCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHh
Q 006776 211 ------------TK-WQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 276 (631)
Q Consensus 211 ------------~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~ 276 (631)
.+ ........+.+....... .........+++++|+|||||||.||+|+++|.+++.+........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~ 242 (560)
T PRK08974 163 LVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAY 242 (560)
T ss_pred cccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhh
Confidence 00 000000111111111110 1111224578999999999999999999999999655443322211
Q ss_pred --cCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCc
Q 006776 277 --FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 354 (631)
Q Consensus 277 --~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~ 354 (631)
......++++..+|++|+++.....+.++..|+++++..+. .++..+++.++++++|++.++|++++.|++...
T Consensus 243 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~- 318 (560)
T PRK08974 243 GPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNP---RDIPGFVKELKKYPFTAITGVNTLFNALLNNEE- 318 (560)
T ss_pred ccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCc---cCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcC-
Confidence 12344567788889999888766667778889987776432 367889999999999999999999999987643
Q ss_pred cccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeC
Q 006776 355 YVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD 434 (631)
Q Consensus 355 ~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d 434 (631)
....+++++|.+++||+++++.+.+++.+.+| +++++.||+||++..++..... ....++++|.|+|++.++|+|
T Consensus 319 -~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~ 393 (560)
T PRK08974 319 -FQELDFSSLKLSVGGGMAVQQAVAERWVKLTG---QYLLEGYGLTECSPLVSVNPYD-LDYYSGSIGLPVPSTEIKLVD 393 (560)
T ss_pred -cccCCccceeEEEecCccCCHHHHHHHHHHhC---CcEEeeecccccCceeeccCCC-CcccCCccccCcCCCEEEEEC
Confidence 23446789999999999999999999999886 7899999999998765544322 224467899999999999999
Q ss_pred CCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechH
Q 006776 435 EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTA 514 (631)
Q Consensus 435 ~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~ 514 (631)
+++++++.|+.|||++++ |.++.||+++++.+...+ . +|||+|||+++++++|+++++||.||+|+++|.+++|.
T Consensus 394 ~~~~~~~~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~-~--~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~ 468 (560)
T PRK08974 394 DDGNEVPPGEPGELWVKG--PQVMLGYWQRPEATDEVI-K--DGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPN 468 (560)
T ss_pred CCCCCCCCCCceEEEEec--CCcchhhcCChhhhhhhh-h--cCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHH
Confidence 999999999999999999 999999999988776655 2 78999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchh
Q 006776 515 EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKI 594 (631)
Q Consensus 515 eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi 594 (631)
+||++|.+||+|.+++|++.+++..++.++++|+..+.. .+ .+++++++++++++++.|..++++++||+|.+||+
T Consensus 469 ~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~-~~---~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~ 544 (560)
T PRK08974 469 EIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPS-LT---EEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKI 544 (560)
T ss_pred HHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCC-CC---HHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcE
Confidence 999999999999999999999988888888887765422 22 46788999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCc
Q 006776 595 MRRILRKIASRQL 607 (631)
Q Consensus 595 ~r~~l~~~~~~~~ 607 (631)
+|+.|++....+.
T Consensus 545 ~r~~l~~~~~~~~ 557 (560)
T PRK08974 545 LRRELRDEARAKV 557 (560)
T ss_pred eHHHHHHHHHhhh
Confidence 9999999887654
No 103
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-62 Score=541.62 Aligned_cols=505 Identities=20% Similarity=0.223 Sum_probs=388.5
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
..+.++|+.++. .+|+.++ + +.+.+..+.+||.||+.++.++|++|.++|+++||+|+++++|++++++++|||++
T Consensus 21 ~~~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~ 96 (579)
T PRK09192 21 PTLVEALDYAAL-GEAGMNF-Y--DRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQY 96 (579)
T ss_pred hhHHHHHHHhhc-cCCceEE-E--ecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHH
Confidence 467788988887 4665443 3 22213357899999999999999999999999999999999999999999999999
Q ss_pred hCCEEEecCCCCC-------HHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCc
Q 006776 133 IGAVHSVVFAGFS-------SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSA 205 (631)
Q Consensus 133 ~G~v~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 205 (631)
+|++++|+++.++ .+++.++++.++++++++++... +.+...... ...+.+.
T Consensus 97 ~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~---------~~~~~~~~~-------~~~~~~~----- 155 (579)
T PRK09192 97 AGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELL---------PWVNEATHG-------NPLLHVL----- 155 (579)
T ss_pred cCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHH---------HHHHHhhcc-------cccccee-----
Confidence 9999999976443 68999999999999999976432 122221101 1111111
Q ss_pred cccccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEE
Q 006776 206 MTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 285 (631)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~ 285 (631)
.+.++..............++++++|+|||||||.||||+++|++++.+........+++.++|++
T Consensus 156 --------------~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~ 221 (579)
T PRK09192 156 --------------SHAWFKALPEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRC 221 (579)
T ss_pred --------------ehhhhcccCCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeE
Confidence 011111111111111234578999999999999999999999999766555444336889999999
Q ss_pred EEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCc-cccccCCCce
Q 006776 286 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE-YVTRYSRKSL 364 (631)
Q Consensus 286 ~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~-~~~~~~l~~l 364 (631)
+..+|++|..|....++.++..|+++++........++..+++++.++++++++..|.++..+...... .....+++++
T Consensus 222 l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~l 301 (579)
T PRK09192 222 VSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCW 301 (579)
T ss_pred EEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhh
Confidence 999999999998777788899999987765322223678899999999999887766655555433211 1233578899
Q ss_pred eEEEEccCCCCHhHHHHHHHHhCCCC---cceecccccccccceecccCCCCC--------------------------C
Q 006776 365 RVLGSVGEPINPSAWRWFFNVVGDSR---CPISDTWWQTETGGFMITPLPGAW--------------------------P 415 (631)
Q Consensus 365 r~v~~~Ge~l~~~~~~~~~~~~~~~~---~~i~~~yg~tE~g~~~~~~~~~~~--------------------------~ 415 (631)
|.+++||+++++.+.+.+.+.++..+ ..+++.||+||+++.++....... .
T Consensus 302 r~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (579)
T PRK09192 302 RVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRV 381 (579)
T ss_pred heeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccc
Confidence 99999999999999999988875321 348999999999865543221100 0
Q ss_pred CCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEE
Q 006776 416 QKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHW 495 (631)
Q Consensus 416 ~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~ 495 (631)
...+++|+|+|+++++|+|+++++++.|+.|||+++| |+++.|||++ +.+...+. .+|||+|||+|++ ++|+++
T Consensus 382 ~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~i~g--~~~~~gY~~~-~~~~~~~~--~dgw~~TGDlg~~-~~G~l~ 455 (579)
T PRK09192 382 RTFVNCGKALPGHEIEIRNEAGMPLPERVVGHICVRG--PSLMSGYFRD-EESQDVLA--ADGWLDTGDLGYL-LDGYLY 455 (579)
T ss_pred eeEeecCCcCCCcEEEEECCCCCCCCCCCEEEEEecC--CchhhhhcCC-cccccccc--CCceeeccceeeE-ECCEEE
Confidence 1135789999999999999999999999999999999 9999999999 44444433 3789999999999 999999
Q ss_pred EEeecCCeEecCceeechHHHHHHHhcCcccc--eEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcC-
Q 006776 496 LTGRVDDVINVSGHRIGTAEVESALVSHPQCA--EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIG- 572 (631)
Q Consensus 496 i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~--~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~- 572 (631)
++||.||+||++|++|+|.|||++|.+||+|. +++|++++++. ++.++++|+..++... ..++|.+++++.+.
T Consensus 456 ~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~---~~~~l~~~~~~~l~~ 531 (579)
T PRK09192 456 ITGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEE---RRGQLIHALAALVRS 531 (579)
T ss_pred EEeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChH---HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 89999998875 5578888877654322 25567777777764
Q ss_pred CCccCceEEECC--CCCCCCCchhhHHHHHHHHhcC
Q 006776 573 AFAAPDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 573 ~~~~p~~i~~v~--~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
.+++|..+++++ +||+|.+||++|++|++++..-
T Consensus 532 ~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~ 567 (579)
T PRK09192 532 EFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSG 567 (579)
T ss_pred HhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHcC
Confidence 477888888885 8999999999999999998764
No 104
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-62 Score=509.02 Aligned_cols=537 Identities=22% Similarity=0.255 Sum_probs=414.3
Q ss_pred cccccCCCchhHhhhhhhhhhccCCCCeeEEEEEcC--CCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC
Q 006776 43 KIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAN--DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML 120 (631)
Q Consensus 43 ~~~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~--~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~ 120 (631)
++.|+.+. -++++.+.+.+. .+++.+++-+... ..+..+.+||.|..+++..++..|+++|+++++.|+|+.-|+
T Consensus 67 ~~~~~~~~--~T~~~~f~~~~~-~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~ 143 (691)
T KOG1256|consen 67 FSCPFDGP--LTLYEGFRRSVE-KSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNR 143 (691)
T ss_pred CCCCCCCc--ccHHHHhhcchh-ccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCC
Confidence 35566654 358899998888 8999999988763 226689999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhh-cCCCccEEEE
Q 006776 121 MELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK-SGISVDVCLT 199 (631)
Q Consensus 121 ~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vi~ 199 (631)
+||+++++||...|++.||+...++++++.++++++..+++|+++.. .....++.... +.++++.+++
T Consensus 144 pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~-----------k~~~ll~~~~~~~~~~LK~iI~ 212 (691)
T KOG1256|consen 144 PEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAK-----------KAEKLLEIKENDSLPSLKAIIQ 212 (691)
T ss_pred hhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHH-----------HHHHHHhhcccccCccceeEEE
Confidence 99999999999999999999999999999999999999999999652 33333333221 2378999998
Q ss_pred EecCCccccccCcCCCCCccchhhhcccCCCC-CCc-eecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHH---HHH
Q 006776 200 YENQSAMTRENTKWQDGRDIWWQDVVPKYPTK-CEV-EWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT---TFK 274 (631)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~---~~~ 274 (631)
++...........-..-..++|+++++-.... ..+ .+..+||.+.|+|||||||.||||++||+|+...... ...
T Consensus 213 ~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~ 292 (691)
T KOG1256|consen 213 LDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSA 292 (691)
T ss_pred ecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhh
Confidence 87654311111111111256788887755321 222 4678999999999999999999999999996553322 111
Q ss_pred Hhc--CCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcC
Q 006776 275 YAF--DYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDG 352 (631)
Q Consensus 275 ~~~--~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~ 352 (631)
... .....|++++++|+.|++......+. +..|+.+.++.+ |+..+.+.|++.+||.+.++|.+|+.+.+..
T Consensus 293 ~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~-~~~G~~IgF~~g-----D~~~l~~dlk~lkPT~f~~VPRVl~riye~I 366 (691)
T KOG1256|consen 293 AENAKATVGDDVYLSYLPLAHIFERVVELYT-FYIGAKIGFARG-----DILKLTDDLKELKPTVFPGVPRVLERIYEGI 366 (691)
T ss_pred cccccccccCceEEEeCcHHHHHHHHHHHhH-hhcccEEEEecC-----ChHHHHHHHHHhCCcEEeccHhHHHHHHHHH
Confidence 111 12336999999999999998665444 588999999987 6777888899999999999999999884321
Q ss_pred Cc----------------------------ccc-ccC--------------CCceeEEEEccCCCCHhHHHHHHHHhCCC
Q 006776 353 NE----------------------------YVT-RYS--------------RKSLRVLGSVGEPINPSAWRWFFNVVGDS 389 (631)
Q Consensus 353 ~~----------------------------~~~-~~~--------------l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~ 389 (631)
.+ ... ... -..+|.+++|++|+++++...++..+|
T Consensus 367 ~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g-- 444 (691)
T KOG1256|consen 367 QKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG-- 444 (691)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC--
Confidence 00 000 000 136999999999999999999999987
Q ss_pred CcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCC-CCcccCCCcceeEEEecCCCcccccccCCchhh
Q 006776 390 RCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERY 468 (631)
Q Consensus 390 ~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~ 468 (631)
++|+++||+||+.+..+...++. ...+++|.|+|+++++++|. +-+--+.|..|||||+| |++|.|||+|++++
T Consensus 445 -~~v~eGYGlTEts~g~~~~~~~d--~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG--~~Vf~GYyK~p~~T 519 (691)
T KOG1256|consen 445 -CRVLEGYGLTETSAGTTLTLPGD--NVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRG--PNVFMGYYKDPEKT 519 (691)
T ss_pred -ceeeecccccccCCceEeccCCC--CCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEec--chhceeccCChHHH
Confidence 99999999999995555455544 37899999999999999885 22223344479999999 99999999999999
Q ss_pred hhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecC-ceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEE
Q 006776 469 ETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFV 547 (631)
Q Consensus 469 ~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~-G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v 547 (631)
.+.+.. +||++|||+|+++++|.++|+||++++||++ |+.|.|..||++..+.+.|.+.+|.|-.. ...+++.|
T Consensus 520 ~e~ide--DGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~---~~~LvaiV 594 (691)
T KOG1256|consen 520 AEAIDE--DGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSL---RSFLVAIV 594 (691)
T ss_pred hhhhcc--ccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcc---hhcEEEEE
Confidence 999876 9999999999999999999999999999998 99999999999999999999999987532 34688999
Q ss_pred EeCCCCCCc---------------------HHHHHHHHHHHH-hhcCCCccCceEEECC------CCCCCCCchhhHHHH
Q 006776 548 TLVEGVPYS---------------------EELRKSLVLAVR-KQIGAFAAPDKIHWAP------GLPKTRSGKIMRRIL 599 (631)
Q Consensus 548 ~~~~~~~~~---------------------~~~~~~i~~~~~-~~l~~~~~p~~i~~v~------~lP~t~sGKi~r~~l 599 (631)
++++....+ +.+..++.+.-+ +.+..+..-+.|.+.+ .=-.|++-|+.|..|
T Consensus 595 vpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l 674 (691)
T KOG1256|consen 595 VPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQL 674 (691)
T ss_pred ecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHH
Confidence 986532210 111223333322 2344455555566532 223588999999999
Q ss_pred HHHHhcCcCCCC
Q 006776 600 RKIASRQLDELG 611 (631)
Q Consensus 600 ~~~~~~~~~~~~ 611 (631)
.+.|.+++++++
T Consensus 675 ~~~yk~~Id~mY 686 (691)
T KOG1256|consen 675 LKYYKKQIDELY 686 (691)
T ss_pred HHHHHHHHHHHH
Confidence 999999887765
No 105
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.4e-62 Score=635.57 Aligned_cols=498 Identities=20% Similarity=0.251 Sum_probs=410.6
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
++++++.+++. .+|+++|+++. ...+||+||.++++++|+.|.++|+++|++|++++++++++++++|||+++
T Consensus 3721 ~~~~~~~~~~~-~~p~~~Av~~~------~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlka 3793 (4334)
T PRK05691 3721 SYVRLFEAQVA-AHPQRIAASCL------DQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKA 3793 (4334)
T ss_pred CHHHHHHHHHH-hCCCceEEEcC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhh
Confidence 67788988888 79999999964 467999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|++++|++|.++.+++.+++++++++++++++...... ......+.. .....+++.+....
T Consensus 3794 G~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~---------~~~~~~~~~--~~~~~~~~~~~~~~-------- 3854 (4334)
T PRK05691 3794 GAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQA---------RALLDELGC--ANRPRLLVWEEVQA-------- 3854 (4334)
T ss_pred CcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchh---------hhhhccccc--ccccceeeeccccc--------
Confidence 99999999999999999999999999999987643210 111111100 00111111111000
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
...+...+.....+++++||+|||||||.||||+++|+++.. ........+++.++|+++..+++.|
T Consensus 3855 ------------~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~f 3921 (4334)
T PRK05691 3855 ------------GEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLN-NQLSKVPYLALSEADVIAQTASQSF 3921 (4334)
T ss_pred ------------ccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHH-HHHHHHHhcCCCccceEEEecCCch
Confidence 000011111235678999999999999999999999999544 4444455789999999999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..+. +.++.+|+.|+++++.+.... .++..+++.++++++|++.++|++++.++.... ..+++||.+++|||+
T Consensus 3922 d~s~-~~~~~~l~~G~~l~i~~~~~~-~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~-----~~~~~lr~~~~gGe~ 3994 (4334)
T PRK05691 3922 DISV-WQFLAAPLFGARVEIVPNAIA-HDPQGLLAHVQAQGITVLESVPSLIQGMLAEDR-----QALDGLRWMLPTGEA 3994 (4334)
T ss_pred hHHH-HHHHHHHhCCCEEEEcCcccc-CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhcc-----ccCCCceEEEecCCc
Confidence 8875 778999999999999875433 478899999999999999999999999886532 246799999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC--CCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEe
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 451 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~--~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~ 451 (631)
+++++.+.|.+.++ ++.++|.||+||++..++...... .......+|+|++++++.|+|++++++|.|..|||+|+
T Consensus 3995 l~~~~~~~~~~~~~--~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~p~g~~GEL~i~ 4072 (4334)
T PRK05691 3995 MPPELARQWLQRYP--QIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALELVPLGAVGELCVA 4072 (4334)
T ss_pred CCHHHHHHHHHhCC--CCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCCCCCCCCceEEEEe
Confidence 99999999988876 588999999999987654322111 11233569999999999999999999999999999999
Q ss_pred cCCCcccccccCCchhhhhhcccc-----CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCccc
Q 006776 452 SSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQC 526 (631)
Q Consensus 452 ~~~p~~~~gy~~~~~~~~~~~~~~-----~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V 526 (631)
| |+++.||+++++.+...|... .++||+|||+|++++||.++++||.|++||++|+||.+.|||++|.++|+|
T Consensus 4073 G--~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v 4150 (4334)
T PRK05691 4073 G--TGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEV 4150 (4334)
T ss_pred c--ccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCc
Confidence 9 999999999999888877532 246999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHH
Q 006776 527 AEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKI 602 (631)
Q Consensus 527 ~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~ 602 (631)
.+++|+.. +...++.++++++...+........++|++++++.||.|++|..+++++.||+|+|||++|++|++.
T Consensus 4151 ~~a~v~~~-~~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4151 REAAVAVQ-EGVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred cEEEEEEe-cCCCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 99888654 3445778999998876654445567889999999999999999999999999999999999999875
No 106
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6e-62 Score=577.49 Aligned_cols=499 Identities=20% Similarity=0.242 Sum_probs=392.5
Q ss_pred hhhhhhhhccCCC-CeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 56 YNCLDRNIEAGLG-DKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 56 ~~~l~~~~~~~~~-~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
.+.+.++++ ++| ++.|+.+. ..+++||+||+++++++|++|++ |+++||+|+++++|+++++++++||+++|
T Consensus 634 ~~~l~~~~~-~~~~~~~ai~~~-----~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G 706 (1140)
T PRK06814 634 FEALIEAAK-IHGFKKLAVEDP-----VNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAG 706 (1140)
T ss_pred HHHHHHHHH-HcCCCCeEeECC-----CCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCC
Confidence 345555555 455 66776531 25689999999999999999975 99999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++++++.++.+++.+++++++++++++++......+ .....+.+ +....++.+++... ...
T Consensus 707 ~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~-------~~~~~~~~----~~~~~~i~~~~~~~----~~~-- 769 (1140)
T PRK06814 707 RVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKAR-------LGPLIEAL----EFGIRIIYLEDVRA----QIG-- 769 (1140)
T ss_pred CEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhc-------chhHHHHh----ccCceEEEehHhhc----cCC--
Confidence 99999999999999999999999999999865322110 11111122 22223443332110 000
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
....+.+......+..+.....++|+++|+|||||||.||||+++|++++.+. ......++++++|++++.+|++|.
T Consensus 770 --~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~-~~~~~~~~~~~~d~~l~~~pl~h~ 846 (1140)
T PRK06814 770 --LADKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANR-AQVAARIDFSPEDKVFNALPVFHS 846 (1140)
T ss_pred --hHHHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHH-HHHHHhhCCCCcCEEEEecchHHH
Confidence 00001111111111111113467999999999999999999999999965444 344456788999999999999999
Q ss_pred cchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCC
Q 006776 295 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 374 (631)
Q Consensus 295 ~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l 374 (631)
.|....++.++..|+++++.+.. .+...+.+.++++++|++.++|++++.+.+.. ...+++++|.+++||+++
T Consensus 847 ~g~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~----~~~~~~~lr~v~~gg~~l 919 (1140)
T PRK06814 847 FGLTGGLVLPLLSGVKVFLYPSP---LHYRIIPELIYDTNATILFGTDTFLNGYARYA----HPYDFRSLRYVFAGAEKV 919 (1140)
T ss_pred HHHHHHHHHHHHcCCEEEEecCc---ccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc----ccccccceeEEEEcCCcC
Confidence 99877788999999999987642 35667889999999999999999999988753 234678999999999999
Q ss_pred CHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCC
Q 006776 375 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 454 (631)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~ 454 (631)
++++.+++.+.++ +++++.||+||++..+....+. ..+++++|+|+|++++++.+.++ .|+.|||+++|
T Consensus 920 ~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~~~~----~~~~Gel~v~g-- 988 (1140)
T PRK06814 920 KEETRQTWMEKFG---IRILEGYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEPVPG----IDEGGRLFVRG-- 988 (1140)
T ss_pred CHHHHHHHHHHhC---CcEEeccccccccceEEecCCC--CCCCCcCCccCCCCeEEEeecCC----CCCceEEEEeC--
Confidence 9999999999886 7899999999999766544322 24578999999999999987543 25679999999
Q ss_pred CcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEee
Q 006776 455 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGV 534 (631)
Q Consensus 455 p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~ 534 (631)
|+++.|||++++... +....+|||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+|+.|.+++|+++
T Consensus 989 ~~~~~gY~~~~~~~~--~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~ 1066 (1140)
T PRK06814 989 PNVMLGYLRAENPGV--LEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSI 1066 (1140)
T ss_pred CCcchhhcCCCCCCc--cccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEc
Confidence 999999998764221 112247899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhh-cCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCc
Q 006776 535 EHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 607 (631)
Q Consensus 535 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~ 607 (631)
+++..++.+++++.. .+.+ .+++++++++. ++++++|..+++++++|+|++||++|++||+++.+..
T Consensus 1067 ~~~~~g~~~~~~~~~---~~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 1134 (1140)
T PRK06814 1067 PDARKGERIILLTTA---SDAT---RAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAA 1134 (1140)
T ss_pred ccCCCCceEEEEEcC---CCcC---HHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhh
Confidence 998888888776542 2222 56788888865 9999999999999999999999999999999988764
No 107
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.4e-62 Score=633.41 Aligned_cols=491 Identities=22% Similarity=0.305 Sum_probs=409.0
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 132 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~ 132 (631)
++++++|++++. .+|+++|+++. .+.+||+||.+++.++|++|.+.|+++|++|+++++|++++++++|||++
T Consensus 1131 ~~l~~~~~~~a~-~~p~~~Al~~~------~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailk 1203 (4334)
T PRK05691 1131 AWLPELLNEQAR-QTPERIALVWD------GGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILK 1203 (4334)
T ss_pred CCHHHHHHHHHH-hCCCCeEEEEC------CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 457889999988 79999999864 46799999999999999999999999999999999999999999999999
Q ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCc
Q 006776 133 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 212 (631)
Q Consensus 133 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 212 (631)
+|++++|++|.++.+++.+++++++++++|+++...... ... ..+ .++.++...
T Consensus 1204 aG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~-------------~~~----~~~-~~~~~~~~~-------- 1257 (4334)
T PRK05691 1204 AGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERL-------------PQA----EGV-SAIALDSLH-------- 1257 (4334)
T ss_pred hCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhc-------------ccc----cCc-eEEeecccc--------
Confidence 999999999999999999999999999999986532110 000 011 111111100
Q ss_pred CCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccc
Q 006776 213 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 292 (631)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 292 (631)
... .+...+.....++++++|+|||||||.||||+++|+++. +........+++.++|++++.++++
T Consensus 1258 --------~~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~ 1324 (4334)
T PRK05691 1258 --------LDS----WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALA-ERLQWMQATYALDDSDVLMQKAPIS 1324 (4334)
T ss_pred --------ccc----cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHH-HHHHHHHHhcCCCCCCEEEEeCCcc
Confidence 000 000111123457899999999999999999999999954 4444455578899999999999999
Q ss_pred eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccC
Q 006776 293 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 372 (631)
Q Consensus 293 ~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge 372 (631)
|..+. +.++.+|+.|+++++.+.... .++..+++.|+++++|++.++|++++.|.+... ...+++||.+++|||
T Consensus 1325 fd~s~-~~~~~~L~~G~~l~i~~~~~~-~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~----~~~~~~lr~~~~gGe 1398 (4334)
T PRK05691 1325 FDVSV-WECFWPLITGCRLVLAGPGEH-RDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL----AAACTSLRRLFSGGE 1398 (4334)
T ss_pred HHHHH-HHHHHHHhCCCEEEEcCcccc-CCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc----cccCCcccEEEEeec
Confidence 98875 678999999999999764332 488999999999999999999999999986532 235789999999999
Q ss_pred CCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEec
Q 006776 373 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 452 (631)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~ 452 (631)
++++++.+++.+.++ +++++|.||+||++..++............++|+|++++.++|+|+++++++.|+.|||+|+|
T Consensus 1399 ~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G~~GEL~i~G 1476 (4334)
T PRK05691 1399 ALPAELRNRVLQRLP--QVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLDAELNLLPPGVAGELCIGG 1476 (4334)
T ss_pred CCCHHHHHHHHHhCC--CcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEECCCCCCCCCCCceEEEecC
Confidence 999999999999886 488999999999986554322111223456899999999999999999999999999999999
Q ss_pred CCCcccccccCCchhhhhhcccc-----CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccc
Q 006776 453 SWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCA 527 (631)
Q Consensus 453 ~~p~~~~gy~~~~~~~~~~~~~~-----~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~ 527 (631)
|+++.||+++++.+...|... ..+||+|||+|++++||.++++||+||+||++|+||+|.|||++|.+||+|.
T Consensus 1477 --~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~ 1554 (4334)
T PRK05691 1477 --AGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVA 1554 (4334)
T ss_pred --cccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcc
Confidence 999999999999888777541 2359999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHH
Q 006776 528 EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 603 (631)
Q Consensus 528 ~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~ 603 (631)
+++|++..+. .++.++++++...+.... .++|+++++++|+.|++|..++++++||+|++||++|+.|++..
T Consensus 1555 ~a~v~~~~~~-~~~~lva~~~~~~~~~~~---~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~~ 1626 (4334)
T PRK05691 1555 QAAVLVREGA-AGAQLVGYYTGEAGQEAE---AERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEPV 1626 (4334)
T ss_pred eEEEEEeeCC-CCCEEEEEEEeCCCCCCC---HHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCccc
Confidence 9999976554 457899999887665443 56899999999999999999999999999999999999997643
No 108
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-61 Score=535.52 Aligned_cols=511 Identities=20% Similarity=0.235 Sum_probs=378.8
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCC---CCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHH
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 131 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~---~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~ 131 (631)
+.++|++++. .+|+++|+++.+.. .+..+.+||.||.+++.++|++|.++| ++||+|+++++|++++++++|||+
T Consensus 3 ~~~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~ 80 (578)
T PRK05850 3 VPSLLRERAS-LQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGAL 80 (578)
T ss_pred HHHHHHHHHh-cCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHH
Confidence 3467778887 79999999975321 123478999999999999999999999 689999999999999999999999
Q ss_pred HhCCEEEecCC---CCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCcccc
Q 006776 132 RIGAVHSVVFA---GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 208 (631)
Q Consensus 132 ~~G~v~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 208 (631)
++|++++|+++ .++.+++.++|++++++++++++... +.++....... ......++.++...
T Consensus 81 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~---- 145 (578)
T PRK05850 81 QAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVV---------DDVTEYVAPQP--GQSAPPVIEVDLLD---- 145 (578)
T ss_pred HcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHH---------HHHHHHHhhcc--cccccceEeecccc----
Confidence 99999999997 55789999999999999999976532 12221111110 00111122111100
Q ss_pred ccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcC-----CCCCc
Q 006776 209 ENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-----YKPSD 283 (631)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~-----~~~~d 283 (631)
+. .. ..........+++++|+|||||||.||||+++|++++.+........+. ..+++
T Consensus 146 ------------~~---~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (578)
T PRK05850 146 ------------LD---SP--RGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDT 208 (578)
T ss_pred ------------cc---cC--CccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcc
Confidence 00 00 0001112457899999999999999999999999976655443332222 35678
Q ss_pred EEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHH-HHhcCC-ccccccCC
Q 006776 284 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRS-LMRDGN-EYVTRYSR 361 (631)
Q Consensus 284 ~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~-l~~~~~-~~~~~~~l 361 (631)
++++.+|++|..|+...++.+++.|+++++.+......++..+++++++++++.+ .+|+++.. +..... ......++
T Consensus 209 ~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~ 287 (578)
T PRK05850 209 TVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDL 287 (578)
T ss_pred eEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcch
Confidence 9999999999999877889999999999998643222378899999999999865 55655443 333211 11224467
Q ss_pred CceeEEEEccCCCCHhHHHHHHHHhCC---CCcceecccccccccceecccCCCCCC-----------------------
Q 006776 362 KSLRVLGSVGEPINPSAWRWFFNVVGD---SRCPISDTWWQTETGGFMITPLPGAWP----------------------- 415 (631)
Q Consensus 362 ~~lr~v~~~Ge~l~~~~~~~~~~~~~~---~~~~i~~~yg~tE~g~~~~~~~~~~~~----------------------- 415 (631)
+++|.+++||+++++++.+++.+.++. .+..+++.||+||++..+.....+...
T Consensus 288 ~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 367 (578)
T PRK05850 288 GGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGG 367 (578)
T ss_pred hhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCC
Confidence 899999999999999999999988753 234689999999987544332211100
Q ss_pred CCCCCcCCCcCCCceEEeCC-CCcccCCCcceeEEEecCCCcccccccCCchhhhhhccc---------cCCCeEecCce
Q 006776 416 QKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK---------PFPGYYFTGDG 485 (631)
Q Consensus 416 ~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~---------~~~g~~~TGDl 485 (631)
....+.|.|. +.+++|+|+ ++.+++.|+.|||+++| |+++.|||++++.+...|.. ..+|||+|||+
T Consensus 368 ~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl 444 (578)
T PRK05850 368 TPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHG--DNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDL 444 (578)
T ss_pred ceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEec--CcccccccCChhhhHHHhhcccccccccCCCCCeeeccce
Confidence 0011334443 578999996 57889999999999999 99999999999988877642 12479999999
Q ss_pred EEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHH---HHHH
Q 006776 486 CSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEE---LRKS 562 (631)
Q Consensus 486 ~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~ 562 (631)
|+++ ||+++++||.||+||++|++|+|.|||++|.+||.+ +++|++++++ .++.++++|+++++...+.+ ...+
T Consensus 445 ~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~ 521 (578)
T PRK05850 445 GFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRT 521 (578)
T ss_pred eeEE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHH
Confidence 9997 999999999999999999999999999999999985 5888889887 67889999998876543321 2345
Q ss_pred HHHHHHhhcCC--CccCceEEECC--CCCCCCCchhhHHHHHHHHhcC
Q 006776 563 LVLAVRKQIGA--FAAPDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 606 (631)
Q Consensus 563 i~~~~~~~l~~--~~~p~~i~~v~--~lP~t~sGKi~r~~l~~~~~~~ 606 (631)
+++.+...+.. ...|..+.+++ .||+|.+||++|++|++.+.+.
T Consensus 522 l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 522 VKREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred HHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcC
Confidence 55555544432 23466666664 8999999999999999998764
No 109
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-61 Score=558.45 Aligned_cols=491 Identities=20% Similarity=0.216 Sum_probs=374.9
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.++|++++. .+|+++|+++. .+.+||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|
T Consensus 449 l~~ll~~~a~-~~pd~~Al~~~------~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aG 521 (994)
T PRK07868 449 LGRIIAEQAR-DAPKGEFLLFD------GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLG 521 (994)
T ss_pred HHHHHHHHHH-HCCCCeEEEeC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 5577888887 79999999864 4689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|++|. +++.+++++++++++|+++.... .+ ..+ ..++++++..... .....
T Consensus 522 av~vpl~p~---~~l~~il~~s~~~~li~~~~~~~------------~~-~~~------~~~iiv~~~~~~~---~~~~~ 576 (994)
T PRK07868 522 AVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLE------------AA-RQL------PGRVLVLGGGESR---DLDLP 576 (994)
T ss_pred CEEEEeCCc---hhHHHHHhccCCeEEEEChHHHH------------HH-Hhc------CceEEEecCCccc---cccCC
Confidence 999999985 68999999999999998754321 11 111 1344444321100 00000
Q ss_pred CC-CccchhhhcccC---CCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecc
Q 006776 215 DG-RDIWWQDVVPKY---PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTAD 290 (631)
Q Consensus 215 ~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 290 (631)
.. ....+.+..... +.........++++++|+|| ||||.||++.++|.+...... .....+++.++|++++.+|
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~-~~~~~~~l~~~d~~L~~~P 654 (994)
T PRK07868 577 DDADVIDMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAF-GTASAAALDRRDTVYCLTP 654 (994)
T ss_pred cchhhhhhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHH-hhhhhcCCCCCCeEEEecC
Confidence 00 011111111110 00001112236899999998 577777777777766544332 2233567889999999999
Q ss_pred cceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEc
Q 006776 291 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 370 (631)
Q Consensus 291 ~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~ 370 (631)
++|.+|+...++.++..|+++++.++ ++++.+++.|+++++|+++++|++++.|++... ....++++||.++
T Consensus 655 l~h~~gl~~~l~~~l~gG~~vvl~~~----~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~--~~~~~~~slr~~~-- 726 (994)
T PRK07868 655 LHHESGLLVSLGGAVVGGSRIALSRG----LDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPA--FVLHGNHPVRLFI-- 726 (994)
T ss_pred hHHHhHHHHHHHHHhccceEEEecCC----CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcC--CccCCCCceEEEe--
Confidence 99999976555565666666666543 489999999999999999999999999987532 2234677899876
Q ss_pred cCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCC-ceEEe-----------CCCC-
Q 006776 371 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGV-QPVIV-----------DEKG- 437 (631)
Q Consensus 371 Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~-~~~i~-----------d~~g- 437 (631)
|+.+++++++++.+.++ .+++++.||+||++.+.. ... ..+++++|+|+||+ +++|. |++|
T Consensus 727 g~gl~~~l~~~~~~~~~--~~~l~~~YG~TE~~~~~~-~~~---~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~ 800 (994)
T PRK07868 727 GSGMPTGLWERVVEAFA--PAHVVEFFATTDGQAVLA-NVS---GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGF 800 (994)
T ss_pred cCCCCHHHHHHHHHHhC--chheeeeeeccccccccc-ccC---CCCCcccCCccCCCCceeEEEecCcCCceeecCCce
Confidence 34599999999999997 478999999999875432 221 24668999999997 66653 4566
Q ss_pred -cccCCCcceeEEEecCCCcccccccCCchhh-hhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHH
Q 006776 438 -VEIEGECSGYLCIKSSWPGAFRTLYGDHERY-ETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAE 515 (631)
Q Consensus 438 -~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~-~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~e 515 (631)
+.++.|+.|||++++ |.. + +++.+ ...++.+.+|||+|||+|++|+||+++|+||.||+||++|.+|+|.|
T Consensus 801 ~~~~~~ge~Gel~~~~--~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~E 873 (994)
T PRK07868 801 VRRAEVNEVGVLLARA--RGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEP 873 (994)
T ss_pred EEEcCCCCceEEEEec--CCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHH
Confidence 567889999999999 432 2 33322 22334434799999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhh
Q 006776 516 VESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 595 (631)
Q Consensus 516 IE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~ 595 (631)
||++|.+||+|.+|+|++++++. ++.++++|+++++...+ .++|+++|++ +++|++|+.|+++++||+|++||++
T Consensus 874 IE~~L~~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~~~---~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~ 948 (994)
T PRK07868 874 VTDALGRIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAAIT---AADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPT 948 (994)
T ss_pred HHHHHhcCCCeeEEEEEeecCCC-CceEEEEEEeCCCCcCC---HHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEe
Confidence 99999999999999999998875 67899999988776555 5678999986 9999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 006776 596 RRILRKIASR 605 (631)
Q Consensus 596 r~~l~~~~~~ 605 (631)
|++|++....
T Consensus 949 r~~L~~~~lp 958 (994)
T PRK07868 949 VSALRAAGIP 958 (994)
T ss_pred hHHHHhcCCC
Confidence 9999876543
No 110
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-60 Score=522.31 Aligned_cols=507 Identities=21% Similarity=0.257 Sum_probs=391.1
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
....|+++++ .+|+++|+++. ...+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 20 ~~~~~~~~~~-~~~~~~a~~~~------~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 92 (545)
T PRK08162 20 PLSFLERAAE-VYPDRPAVIHG------DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAG 92 (545)
T ss_pred HHHHHHHHHH-HCCCCeEEEEC------CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhC
Confidence 3466677777 79999999863 4689999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++++|++++++.+++..++++++++++++++... ..+.++...+ +.. +.+.+...... .....
T Consensus 93 ~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~----~~~-~~~~~~~~~~~---~~~~~ 155 (545)
T PRK08162 93 AVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFA---------EVAREALALL----PGP-KPLVIDVDDPE---YPGGR 155 (545)
T ss_pred cEEeccccccChHHHHHHHHhCCCeEEEEccchh---------hHHHHHHhhC----CCC-ceEEEecCccc---cccCC
Confidence 9999999999999999999999999999987542 2333332222 221 12222221100 00000
Q ss_pred CCCccchhhhcccCCCCCCc-eecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 215 DGRDIWWQDVVPKYPTKCEV-EWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
......+.++.......... ...+.+++++|+|||||||.||||+++|++++.+.... ...+++..++++++.+|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~-~~~~~~~~~~~~l~~~pl~h 234 (545)
T PRK08162 156 FIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSN-ILAWGMPKHPVYLWTLPMFH 234 (545)
T ss_pred CcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHH-HHhcCCCCCCeeEeccCcHh
Confidence 01122344443322221111 11234679999999999999999999999865554433 33567788899999999999
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
..|....++..+ .|++.++... +++..+++.++++++|++.++|++++.|.+..... ...+.+.+.++++|+.
T Consensus 235 ~~~~~~~~~~~~-~~g~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--~~~~~~~~~~~~~g~~ 307 (545)
T PRK08162 235 CNGWCFPWTVAA-RAGTNVCLRK----VDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEW--RAGIDHPVHAMVAGAA 307 (545)
T ss_pred hhhHHHHHHHHH-HccEEEEeCC----CCHHHHHHHHHHcCCeEEEechHHHHHHHhCcccc--ccCCccceEEEECCCC
Confidence 888655444444 4555554432 48999999999999999999999999999764321 2234566777899999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCC---------CCCCCCCcCCCcCC-CceEEeCC-CCcccCC
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---------WPQKPGSATFPFFG-VQPVIVDE-KGVEIEG 442 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~---------~~~~~~~~G~p~~~-~~~~i~d~-~g~~~~~ 442 (631)
+++++.+++.+. + +++++.||+||+++.+....... .....++.|.+.+. ..++|+|+ ++.+++.
T Consensus 308 ~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~ 383 (545)
T PRK08162 308 PPAAVIAKMEEI-G---FDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPA 383 (545)
T ss_pred CCHHHHHHHHHh-C---CceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCC
Confidence 999999888764 4 78999999999875444321110 01123456666653 45788885 6788875
Q ss_pred -C-cceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHH
Q 006776 443 -E-CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESAL 520 (631)
Q Consensus 443 -g-~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l 520 (631)
| +.|||+++| |.++.|||++++.+...+. +|||+|||+|++|+||+++++||.||+||++|++|+|.+||++|
T Consensus 384 ~g~~~Gel~v~g--~~~~~gY~~~~~~~~~~~~---~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l 458 (545)
T PRK08162 384 DGETIGEIMFRG--NIVMKGYLKNPKATEEAFA---GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVL 458 (545)
T ss_pred CCCceeEEEEec--CcchhhhcCChhhhHHHhh---CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHH
Confidence 3 469999999 8999999999988877663 68999999999999999999999999999999999999999999
Q ss_pred hcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 521 VSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 521 ~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
.+||+|.+++|++.+++..++.++++|++.++...+ .+++++++++.|+++++|..+++ ++||+|++||++|+.|+
T Consensus 459 ~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~ 534 (545)
T PRK08162 459 YRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASAT---EEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLR 534 (545)
T ss_pred HhCCcccEEEEEeeeccccCceEEEEEEeCCCCCCC---HHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHH
Confidence 999999999999999887788999999988765444 56899999999999999998875 67999999999999999
Q ss_pred HHHhcC
Q 006776 601 KIASRQ 606 (631)
Q Consensus 601 ~~~~~~ 606 (631)
+.+...
T Consensus 535 ~~~~~l 540 (545)
T PRK08162 535 EQAKSL 540 (545)
T ss_pred HHHhhh
Confidence 987653
No 111
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.2e-61 Score=515.62 Aligned_cols=445 Identities=19% Similarity=0.169 Sum_probs=370.9
Q ss_pred hhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEec
Q 006776 61 RNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 140 (631)
Q Consensus 61 ~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l 140 (631)
++++ .+|+++|+++. .+.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+
T Consensus 11 ~~a~-~~~~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~ 83 (458)
T PRK09029 11 HWAQ-VRPQAIALRLN------DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPL 83 (458)
T ss_pred HHHH-hCCCceeeecC------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeec
Confidence 3455 69999999842 5789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccc
Q 006776 141 FAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIW 220 (631)
Q Consensus 141 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 220 (631)
++.++.+++..++++++++++++++.... + ..+.... ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~-----------~~~~~~~-~~~------------------ 123 (458)
T PRK09029 84 NPQLPQPLLEELLPSLTLDFALVLEGENT----------F-----------SALTSLH-LQL------------------ 123 (458)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcccc----------h-----------hhccccc-ccc------------------
Confidence 99999999999999999999998765311 0 0000000 000
Q ss_pred hhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHH
Q 006776 221 WQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYV 300 (631)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~ 300 (631)
..........++++++++|||||||.||+|+++|++++..... ....++..++++++..+|++|.+|. ..
T Consensus 124 --------~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~-~~~~~~~~~~~~~l~~~p~~h~~g~-~~ 193 (458)
T PRK09029 124 --------VEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEG-VLSLMPFTAQDSWLLSLPLFHVSGQ-GI 193 (458)
T ss_pred --------ccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHH-HhhcCCCCccceEEEecCcHhhhhh-HH
Confidence 0000112245788999999999999999999999996655443 3446788999999999999999986 45
Q ss_pred HHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHH
Q 006776 301 TYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWR 380 (631)
Q Consensus 301 ~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~ 380 (631)
++.++..|+++++.+. ..+++.+. ++|.+..+|+++..++..... ..++|.+++||+++++.+.+
T Consensus 194 ~~~~l~~G~~v~~~~~-------~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~------~~~l~~i~~gG~~~~~~~~~ 258 (458)
T PRK09029 194 VWRWLYAGATLVVRDK-------QPLEQALA--GCTHASLVPTQLWRLLDNRSE------PLSLKAVLLGGAAIPVELTE 258 (458)
T ss_pred HHHHHhCCceEEeCCh-------HHHHHHHh--hceeeecChHHHHHHHhcccc------CCcceEEEECCCCCCHHHHH
Confidence 6778999999998642 45677774 789999999999999876432 34799999999999999999
Q ss_pred HHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCccccc
Q 006776 381 WFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRT 460 (631)
Q Consensus 381 ~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~g 460 (631)
++.+. + +++++.||+||++...+.... ....++|.|++++.++|++ |||+++| +.++.|
T Consensus 259 ~~~~~-g---~~~~~~YG~tE~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~-----------gel~v~g--~~~~~g 317 (458)
T PRK09029 259 QAEQQ-G---IRCWCGYGLTEMASTVCAKRA----DGLAGVGSPLPGREVKLVD-----------GEIWLRG--ASLALG 317 (458)
T ss_pred HHHHc-C---CcEeccccccccCcceeccCC----CCCCCCCCCCCCCEEEEeC-----------CEEEEec--Cceeee
Confidence 88754 4 789999999999865443221 1235699999999999975 8999999 999999
Q ss_pred ccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCC
Q 006776 461 LYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKG 540 (631)
Q Consensus 461 y~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~ 540 (631)
||++++.+... ..+|||+|||+|++| ||++++.||+||+||++|++|+|.|||++|.+||+|.+++|++++++..+
T Consensus 318 Y~~~~~~~~~~---~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~ 393 (458)
T PRK09029 318 YWRQGQLVPLV---NDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFG 393 (458)
T ss_pred eecCccccccc---cCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccC
Confidence 99988765322 237899999999999 99999999999999999999999999999999999999999999999889
Q ss_pred eeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCc
Q 006776 541 QGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 607 (631)
Q Consensus 541 ~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~ 607 (631)
+.++++|++.... + .++|+++|+++|++|++|..+++++++|+|.+||++|+.|++++++..
T Consensus 394 ~~~~a~v~~~~~~--~---~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~ 455 (458)
T PRK09029 394 QRPVAVVESDSEA--A---VVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQL 455 (458)
T ss_pred ceEEEEEEcCccc--C---HHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhcc
Confidence 9999999876332 2 668999999999999999999999999999999999999999998653
No 112
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-60 Score=520.67 Aligned_cols=498 Identities=19% Similarity=0.149 Sum_probs=378.7
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+.|..++. ..|+.+++... +..+.+||.||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~----~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g 78 (545)
T PRK07768 4 FTEKMYANAR-TSPRGMVTGEP----DAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRG 78 (545)
T ss_pred HHHHHHHHhh-CCCcceEEecC----CCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 4455556666 57888887643 336789999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHH-------HHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc
Q 006776 135 AVHSVVFAGFSSDSL-------AQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 207 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 207 (631)
++++++++..+.+++ ..+++.++++.+++++..... . ..+.. ..+ .+
T Consensus 79 ~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------~----~~~~~--~~~-~~---------- 132 (545)
T PRK07768 79 ASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAA---------A----PVLEE--KGI-RV---------- 132 (545)
T ss_pred ccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhh---------h----hhhcc--cCC-ce----------
Confidence 999999988776544 456777899999987653210 0 00000 000 01
Q ss_pred cccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCC-cEEE
Q 006776 208 RENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPS-DVYW 286 (631)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~-d~~~ 286 (631)
+.++++....+. ......++++++|+|||||||.||+|+++|++++.+. ......+++.++ |+++
T Consensus 133 -----------~~~~~l~~~~~~--~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~-~~~~~~~~~~~~~d~~~ 198 (545)
T PRK07768 133 -----------LTVADLLAADPI--DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANA-EAMFVAAEFDVETDVMV 198 (545)
T ss_pred -----------eehhhhcccCCC--CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHH-HHHHHhcCCCCCCceeE
Confidence 112222221111 1223467999999999999999999999999965544 334445677776 8999
Q ss_pred EecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCcc--ccccCCCce
Q 006776 287 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY--VTRYSRKSL 364 (631)
Q Consensus 287 ~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~~~l~~l 364 (631)
+.+|+.|..|....++.++..|+++++........++..+++++++++++++.+.|.++..+.+..... ....+++++
T Consensus 199 ~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 278 (545)
T PRK07768 199 SWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSL 278 (545)
T ss_pred EeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchhe
Confidence 999999999987667788999999998765333346788899999999999988888877666532111 123578899
Q ss_pred eEEEEccCCCCHhHHHHHHHH---hCCCCcceecccccccccceecccCCCC------------------------CCCC
Q 006776 365 RVLGSVGEPINPSAWRWFFNV---VGDSRCPISDTWWQTETGGFMITPLPGA------------------------WPQK 417 (631)
Q Consensus 365 r~v~~~Ge~l~~~~~~~~~~~---~~~~~~~i~~~yg~tE~g~~~~~~~~~~------------------------~~~~ 417 (631)
|.++++|+++++++.+++.+. ++.....+++.||+||++..++....+. ....
T Consensus 279 r~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (545)
T PRK07768 279 RFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRR 358 (545)
T ss_pred eeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcce
Confidence 999999999999999998875 5432345999999999987554322211 0123
Q ss_pred CCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEE
Q 006776 418 PGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLT 497 (631)
Q Consensus 418 ~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~ 497 (631)
++++|+|+++++++|+|++|++++.|+.|||++++ +.++.|||++..... ... .+|||+|||+++++++|+++++
T Consensus 359 ~~~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~-~~~--~~g~~~TGDl~~~~~~g~l~~~ 433 (545)
T PRK07768 359 LATLGPPLPGLEVRVVDEDGQVLPPRGVGVIELRG--ESVTPGYLTMDGFIP-AQD--ADGWLDTGDLGYLTEEGEVVVC 433 (545)
T ss_pred EEeccCCCCCCEEEEECCCCCCCCCCCEEEEEEcc--CcccccccCCCCCcc-ccc--CCCeeeccceEEEecCCEEEEE
Confidence 46899999999999999999999999999999999 899999998654322 222 3689999999999999999999
Q ss_pred eecCCeEecCceeechHHHHHHHhcCcccceEEEEeeec--CCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCC-
Q 006776 498 GRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEH--EVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAF- 574 (631)
Q Consensus 498 GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~- 574 (631)
||+||+||++|++|+|.+||++|.+||+|.+++|++++. ...++.+++++...... ++....++.+.+++.+..+
T Consensus 434 GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~l~~~~~~~l~~~~ 511 (545)
T PRK07768 434 GRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFE--DPAEVRRIRHQVAHEVVAEV 511 (545)
T ss_pred ccccceEEECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccc--cHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999988887653 33455555555544332 2233445666666654433
Q ss_pred -ccCceEEECC--CCCCCCCchhhHHHHHHHHh
Q 006776 575 -AAPDKIHWAP--GLPKTRSGKIMRRILRKIAS 604 (631)
Q Consensus 575 -~~p~~i~~v~--~lP~t~sGKi~r~~l~~~~~ 604 (631)
..|..+.+++ .||+|++||++|+.||+.+.
T Consensus 512 ~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 512 GVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 5788888886 89999999999999999774
No 113
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=5.1e-59 Score=496.89 Aligned_cols=435 Identities=23% Similarity=0.327 Sum_probs=359.1
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 87 TYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 87 Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++++++.++.+.+..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEE
Q 006776 167 VKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLL 246 (631)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (631)
.... .... ...... .. ... ...........+++++++
T Consensus 81 ~~~~--~~~~-----~~~~~~----------------~~-------------------~~~-~~~~~~~~~~~~~~~~i~ 117 (436)
T TIGR01923 81 LEEK--DFQA-----DSLDRI----------------EA-------------------AGR-YETSLSASFNMDQIATLM 117 (436)
T ss_pred cccc--ceee-----cchHhh----------------hh-------------------ccc-ccccccccCCcCceEEEE
Confidence 3210 0000 000000 00 000 000001224568899999
Q ss_pred eCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHH
Q 006776 247 YTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRS 326 (631)
Q Consensus 247 ~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~ 326 (631)
|||||||.||+|+++|+++..... .....++++++|++++.+|+.|+.+. ..++.++..|+++++.++. ..+
T Consensus 118 ~TSGtTG~PK~v~~s~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~------~~~ 189 (436)
T TIGR01923 118 FTSGTTGKPKAVPHTFRNHYASAV-GSKENLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKF------NQL 189 (436)
T ss_pred eCCCCCCCCcEEEEehHHHHHHHH-HHHhhcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchH------HHH
Confidence 999999999999999999655444 44456789999999999999998886 4678899999999997542 389
Q ss_pred HHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccccccccccee
Q 006776 327 WDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFM 406 (631)
Q Consensus 327 ~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~ 406 (631)
++.++++++|++.++|+++..+.+.... .+++|.++++|+++++++.+++.+ ++ +++++.||+||+|+..
T Consensus 190 ~~~l~~~~~t~~~~~P~~l~~l~~~~~~------~~~l~~~~~~G~~~~~~~~~~~~~-~~---~~~~~~YG~tE~~~~~ 259 (436)
T TIGR01923 190 LEMIANERVTHISLVPTQLNRLLDEGGH------NENLRKILLGGSAIPAPLIEEAQQ-YG---LPIYLSYGMTETCSQV 259 (436)
T ss_pred HHHHHHhCCeEEEeHHHHHHHHHhCcCC------CCceEEEEECCCCCCHHHHHHHHH-hC---CceeeEecCCccchhc
Confidence 9999999999999999999999886432 168999999999999999988765 44 7899999999998765
Q ss_pred cccCCCCCCCCCCCcCCCcCCCceEE-eCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCce
Q 006776 407 ITPLPGAWPQKPGSATFPFFGVQPVI-VDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDG 485 (631)
Q Consensus 407 ~~~~~~~~~~~~~~~G~p~~~~~~~i-~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl 485 (631)
+.........++ ++|.|++++++++ .++.+ +.|||++++ |.++.|||++++.+...+ .+|||+|||+
T Consensus 260 ~~~~~~~~~~~~-~~G~~~~~~~~~i~~~~~~------~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~~~~~TGD~ 327 (436)
T TIGR01923 260 TTATPEMLHARP-DVGRPLAGREIKIKVDNKE------GHGEIMVKG--ANLMKGYLYQGELTPAFE---QQGWFNTGDI 327 (436)
T ss_pred cCcCcccccccc-CCCccCCCcEEEEEeCCCC------CceEEEEEC--CccchhhCCChhhhhhhh---cCCCeeccce
Confidence 543332222223 4899999999998 44332 579999999 999999999776554432 2689999999
Q ss_pred EEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHH
Q 006776 486 CSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVL 565 (631)
Q Consensus 486 ~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~ 565 (631)
+++++||++++.||.||+||++|++|++.+||++|.+++.|.+++|++.++...++.++++|++.++. + .+++.+
T Consensus 328 ~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--~---~~~l~~ 402 (436)
T TIGR01923 328 GELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESDI--S---QAKLIA 402 (436)
T ss_pred EEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCCC--C---HHHHHH
Confidence 99999999999999999999999999999999999999999999999998877788889999887642 2 567888
Q ss_pred HHHhhcCCCccCceEEECCCCCCCCCchhhHHHH
Q 006776 566 AVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRIL 599 (631)
Q Consensus 566 ~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l 599 (631)
++++.|+++++|..++++++||+|++||++|+.|
T Consensus 403 ~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 403 YLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred HHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 9999999999999999999999999999999864
No 114
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-58 Score=485.42 Aligned_cols=403 Identities=18% Similarity=0.202 Sum_probs=346.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEE
Q 006776 83 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 162 (631)
Q Consensus 83 ~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii 162 (631)
++++||.||.++++++|+.|. +|+++|++|+++++|++++++++|||+++|++++|+++..+.+.+..+++++++++++
T Consensus 6 ~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i 84 (414)
T PRK08308 6 DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLL 84 (414)
T ss_pred CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEE
Confidence 468999999999999999985 7899999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccCCCCCCceecCCCCC
Q 006776 163 TSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDP 242 (631)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (631)
+++.... . . . .....++++
T Consensus 85 ~~~~~~~-----------------~----~-----------------~-----------------------~~~~~~~~~ 103 (414)
T PRK08308 85 YGESDFT-----------------K----L-----------------E-----------------------AVNYLAEEP 103 (414)
T ss_pred ecCcccc-----------------c----c-----------------c-----------------------CCCCCCCCc
Confidence 8652100 0 0 0 001246789
Q ss_pred eEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCC
Q 006776 243 LFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPD 322 (631)
Q Consensus 243 ~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~ 322 (631)
++|+|||||||.||+|+++|+++..+.. .....+++..+|+++..+|+.|.+|....++.++..|+++++... ++
T Consensus 104 ~~i~~TSGtTG~PKgv~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~~ 178 (414)
T PRK08308 104 SLLQYSSGTTGEPKLIRRSWTEIDREIE-AYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN----KN 178 (414)
T ss_pred eEEEECCCCCCCCcEEEEehHhHHHHHH-HHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC----CC
Confidence 9999999999999999999999655443 333457788899999999999999987788999999999999765 47
Q ss_pred hhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccc
Q 006776 323 SGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTET 402 (631)
Q Consensus 323 ~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~ 402 (631)
+..+++.++++++|.+.++|+++..|.+.... ..+++.++++|+++++++.+.+.+.. .++++.||+||+
T Consensus 179 ~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~------~~~l~~~~~~G~~l~~~~~~~~~~~~----~~~~~~YG~tE~ 248 (414)
T PRK08308 179 PKFALNILRNTPQHILYAVPLMLHILGRLLPG------TFQFHAVMTSGTPLPEAWFYKLRERT----TYMMQQYGCSEA 248 (414)
T ss_pred HHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc------cccccEEEEccCCCCHHHHHHHHHhC----ChhhhccCcccc
Confidence 89999999999999999999999999876431 13688999999999999999988762 579999999999
Q ss_pred cceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEec
Q 006776 403 GGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFT 482 (631)
Q Consensus 403 g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~T 482 (631)
++...... ...++++|+|+|++++++.++. ++.|||++++ .+|||+|
T Consensus 249 ~~~~~~~~----~~~~~~~G~p~~~~~~~~~~~~------~~~gel~v~~-----------------------~~~~~~T 295 (414)
T PRK08308 249 GCVSICPD----MKSHLDLGNPLPHVSVSAGSDE------NAPEEIVVKM-----------------------GDKEIFT 295 (414)
T ss_pred CCeeecCC----CCCCCccCccCCCeEEEEecCC------CCCceEEEEc-----------------------CCceEEC
Confidence 86443211 2356789999999999987643 4569999986 1579999
Q ss_pred CceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHH
Q 006776 483 GDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKS 562 (631)
Q Consensus 483 GDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 562 (631)
||+|++++||+++++||.||+||++|++|+|.|||++|.++|+|.+++|++.+++..++.++++++..... + .++
T Consensus 296 GDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~~--~---~~~ 370 (414)
T PRK08308 296 KDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEEI--D---PVQ 370 (414)
T ss_pred CceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC--C---HHH
Confidence 99999999999999999999999999999999999999999999999999999988889999998876532 3 567
Q ss_pred HHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHH
Q 006776 563 LVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 600 (631)
Q Consensus 563 i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~ 600 (631)
++++++++|+++++|..++++++||+|++||++|+.|+
T Consensus 371 l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 371 LREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 88999999999999999999999999999999999654
No 115
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=8.6e-57 Score=444.22 Aligned_cols=505 Identities=20% Similarity=0.238 Sum_probs=389.4
Q ss_pred CceeeecHHHHHHHHHHHHHHHHHCCCCCCCE-EEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCce
Q 006776 81 GVDATLTYSQLLQQVCQLANYLKDIGVKKGDA-VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPK 159 (631)
Q Consensus 81 ~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~-V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~ 159 (631)
++...+||.|+..++.++|++|.++|++++++ |+|+.+.+.+|+.+++||++-+...|.+...++.+.|.+-|++++++
T Consensus 85 g~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~ 164 (678)
T KOG1180|consen 85 GDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETEST 164 (678)
T ss_pred cceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccce
Confidence 56789999999999999999999999997666 99999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccc-cccCc-C--CCCCccchhhhcccCCCC-CCc
Q 006776 160 VVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT-RENTK-W--QDGRDIWWQDVVPKYPTK-CEV 234 (631)
Q Consensus 160 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~-~~~ 234 (631)
.|||+.... +.+...++.+ +.++++|.++..+... .+..+ . ..-..++++++++-.+.. .++
T Consensus 165 ~i~T~~~LL---------~kl~~~l~~~----~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~ 231 (678)
T KOG1180|consen 165 AIFTDSELL---------PKLKAPLKQA----KTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPP 231 (678)
T ss_pred EEEeCHHHH---------HHHHHHHhcc----CceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCC
Confidence 999987532 3444455555 8899999887532111 00111 1 112345677776654432 233
Q ss_pred eecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEe
Q 006776 235 EWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 314 (631)
Q Consensus 235 ~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~ 314 (631)
.+..++|+|+|+|||||||.||||+++|.|+++...........+.+.|+++.++|+.|+.-+.+. +.++..|+.+-+.
T Consensus 232 ~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE-~~~ft~G~~iGY~ 310 (678)
T KOG1180|consen 232 HPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAE-LVCFTWGGRIGYS 310 (678)
T ss_pred CCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHH-HHHHhhCCEeecC
Confidence 444789999999999999999999999999777766666555678999999999999999988666 5668888887765
Q ss_pred cCCCCCCChhH----HHHHHHHhCCcEEeecHHHHHHHHhcCCcccc---------------------------------
Q 006776 315 EGAPTYPDSGR----SWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVT--------------------------------- 357 (631)
Q Consensus 315 ~~~~~~~~~~~----~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--------------------------------- 357 (631)
+.......... .--.+...|||.+.++|.+++.+.+...+...
T Consensus 311 S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~ 390 (678)
T KOG1180|consen 311 SPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDA 390 (678)
T ss_pred CcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHH
Confidence 43222111111 11234568999999999999888542110000
Q ss_pred -------ccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCce
Q 006776 358 -------RYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQP 430 (631)
Q Consensus 358 -------~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~ 430 (631)
...--.||.+++||++|++++.+.+.-.+. +|+.++||.||+++..+...+.+ ...|.+|.|++-+++
T Consensus 391 lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C---~Pv~qGYGLTEtca~~tv~e~~d--~~~g~vG~pl~c~ei 465 (678)
T KOG1180|consen 391 LVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFC---CPVLQGYGLTETCAAATVLEPED--FSTGRVGAPLPCCEI 465 (678)
T ss_pred HHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcc---ccccccccccchhcccEecChhh--cccccccCCccceEE
Confidence 000136999999999999999999998886 79999999999998766655544 456799999999999
Q ss_pred EEeCC-CCcccCCC--cceeEEEecCCCcccccccCCchhhhhhccccCCC--eEecCceEEEccCCeEEEEeecCCeEe
Q 006776 431 VIVDE-KGVEIEGE--CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRDKDGYHWLTGRVDDVIN 505 (631)
Q Consensus 431 ~i~d~-~g~~~~~g--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g--~~~TGDl~~~~~dG~l~i~GR~dd~i~ 505 (631)
+++|- +|-=.+.+ ..|||+++| |++..|||+|++.+...|.. .+| ||+|||+|++.+||.|.|++|++|.+|
T Consensus 466 KLvdw~EgGY~~~~~PPrGEI~i~G--~~vt~gY~kn~ekT~e~ft~-~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVK 542 (678)
T KOG1180|consen 466 KLVDWEEGGYFAKNKPPRGEILIGG--PNVTMGYYKNEEKTKEDFTV-EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVK 542 (678)
T ss_pred EEEEhhhcCccCCCCCCCceEEecC--CccChhhhCChhhhhhhcee-cCCcEEEeccccceecCCCcEEEeechhhhhh
Confidence 99983 22111111 369999999 99999999999999999877 677 999999999999999999999999999
Q ss_pred c-CceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCC----------CC--------cHHH----HHH
Q 006776 506 V-SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV----------PY--------SEEL----RKS 562 (631)
Q Consensus 506 ~-~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~----------~~--------~~~~----~~~ 562 (631)
. +|+.|++.-+|+++...|.|...+|.+-.. ...++++||++++. .. +..+ .++
T Consensus 543 lq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~---~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~ 619 (678)
T KOG1180|consen 543 LQNGEYISLGKVEAALRSSPYVDNICVYADSN---KSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKE 619 (678)
T ss_pred hcccceeehHHHHHHHhcCcchhheEEecccc---cceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHH
Confidence 8 599999999999999999999999986533 34699999987532 11 1122 233
Q ss_pred HHHHH-HhhcCCCccCceEEECCCCCCCC-------CchhhHHHHHHHHhcCcCCCC
Q 006776 563 LVLAV-RKQIGAFAAPDKIHWAPGLPKTR-------SGKIMRRILRKIASRQLDELG 611 (631)
Q Consensus 563 i~~~~-~~~l~~~~~p~~i~~v~~lP~t~-------sGKi~r~~l~~~~~~~~~~~~ 611 (631)
+.++- .++|..+.+|..|++.+ .|-|+ .-|+.|+.++..|.++++.++
T Consensus 620 L~~~ak~~~L~~iEip~~I~l~~-e~WTPenGlvT~A~KLKRk~I~~~~k~ei~~~Y 675 (678)
T KOG1180|consen 620 LIEAAKSQKLERIEIPAKIVLSP-EPWTPENGLVTAALKLKRKEILAAYKKEIDRLY 675 (678)
T ss_pred HHHHHHhcccccccccceeEecC-CCcCCCccccHHHHHhhHHHHHHHHHHHHHHHh
Confidence 33333 34588899999998887 44554 449999999999988766544
No 116
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.8e-56 Score=472.89 Aligned_cols=413 Identities=29% Similarity=0.451 Sum_probs=319.7
Q ss_pred hhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEE
Q 006776 59 LDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHS 138 (631)
Q Consensus 59 l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v 138 (631)
++++++ .+||++|+++ +..+.+||+||++++.++|..|.++|+++||+|+++++|++++++++|||+++|++++
T Consensus 1 f~~~a~-~~pd~~a~~~-----~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v 74 (417)
T PF00501_consen 1 FERQAQ-RYPDRIALID-----DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPV 74 (417)
T ss_dssp HHHHHH-HSTTSEEEEE-----TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEE
T ss_pred ChhHHh-hCCCceEEEE-----CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccc
Confidence 356676 7999999997 2378999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCc
Q 006776 139 VVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRD 218 (631)
Q Consensus 139 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 218 (631)
|++|.++.+++.+++++++++++|+ .... +-.. +....... ........++.++..... .. .
T Consensus 75 ~l~~~~~~~~~~~~l~~~~~~~ii~-~~~~------d~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~-~ 136 (417)
T PF00501_consen 75 PLDPSLSEDELRHILRQSGPKVIIT-SEAV------DSEP-LKKLKSIF-KQEDPSSSIIILDRDDLP--------KK-E 136 (417)
T ss_dssp EEETTSSHHHHHHHHHHHTESEEEE-CHHH------SCHH-HHHHHHHH-TTSTTTEEEEEESHSSCT--------TC-H
T ss_pred ccccccccccccccccccceeEEEE-eccc------cccc-cccchhhh-cccccccccccccccccc--------cc-c
Confidence 9999999999999999999999998 2000 0011 11111111 000223444444432210 00 0
Q ss_pred cchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHH-HHhcCCCCCcEEEEecccceecch
Q 006776 219 IWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF-KYAFDYKPSDVYWCTADCGWITGH 297 (631)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~g~ 297 (631)
............ .+. ..++++++++|||||||.||+|.++|++++....... ...++++ |++++.+|++|..|+
T Consensus 137 ~~~~~~~~~~~~-~~~--~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~ 211 (417)
T PF00501_consen 137 ALKSASLSDEPQ-SPE--DSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGL 211 (417)
T ss_dssp HHHHHHHCHCSH-STT--HTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHH
T ss_pred cccccccccccc-cCC--CCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccc
Confidence 000000000000 000 0468999999999999999999999998666544422 2223333 699999999999998
Q ss_pred hHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCcc--ccccCCCceeEEEEccCCCC
Q 006776 298 SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY--VTRYSRKSLRVLGSVGEPIN 375 (631)
Q Consensus 298 ~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~~~l~~lr~v~~~Ge~l~ 375 (631)
...++.++..|+++++++..+. .+++.+++.++++++|+++++|+++..|++..... ....++++||.++++|++++
T Consensus 212 ~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~ 290 (417)
T PF00501_consen 212 ISALLAALFSGATLVLPSPFDL-FDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLP 290 (417)
T ss_dssp HHHHHHHHHCTSEEEEESSHHH-HHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-C
T ss_pred cccccccccccccccccccccc-cccccchhcccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 7888999999999999986532 23577899999999999999999999999832111 12347889999999999999
Q ss_pred HhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCC-CcccCCCcceeEEEecCC
Q 006776 376 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEK-GVEIEGECSGYLCIKSSW 454 (631)
Q Consensus 376 ~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~-g~~~~~g~~Gel~v~~~~ 454 (631)
+++.+++++.++. .++++.||+||+|.+.+.........+++++|.|+|+++++|+|++ +++++.|+.|||+|+|
T Consensus 291 ~~~~~~~~~~~~~--~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~-- 366 (417)
T PF00501_consen 291 PDLLRRLRKAFGN--APIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRG-- 366 (417)
T ss_dssp HHHHHHHHHHHTT--SEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEES--
T ss_pred hhhcccccccccc--ccceecccccccceeeecccccccccccccccccccccccccccccccccccccccccccccC--
Confidence 9999999999983 5899999999999987644222222467889999999999999997 9999999999999999
Q ss_pred CcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecC
Q 006776 455 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS 507 (631)
Q Consensus 455 p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~ 507 (631)
|.++.||+++++.+...|.. +|||+|||+|++|+||+++++||+||+||++
T Consensus 367 ~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 367 PNVFSGYYNDPELTAEAFID--DGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TTSBSEETTBHHHHHHHEET--TSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred Cccceeeecccccccccccc--ccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 99999999999888888764 5899999999999999999999999999975
No 117
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=8.3e-55 Score=432.26 Aligned_cols=503 Identities=22% Similarity=0.289 Sum_probs=391.7
Q ss_pred hhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 55 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 55 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
+.+++..+++ ++|+|+|+++++ +.+.+||+|+.+.++++|+.|...|++.||+|+++|+|.+|++.+.|+++++|
T Consensus 79 i~~~F~~~vr-r~p~k~aii~~~----~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlG 153 (649)
T KOG1179|consen 79 IAELFLSQVR-RQPDKPAIIYEG----PFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLG 153 (649)
T ss_pred HHHHHHHHHH-hCCCccEEEEeC----CCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhC
Confidence 3455666666 699999999984 36899999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
++...||++...+.|.|.|..++++.+|++.+.. ..+.+++..+. ..--++...+..+.
T Consensus 154 v~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~---------~~~~e~~~~l~---~~~i~~~~~~~~~~--------- 212 (649)
T KOG1179|consen 154 VITAFINTNLRGEPLLHSITVSGARALVVGPELL---------NALEEILPLLI---KNGIHVFSLGPTSV--------- 212 (649)
T ss_pred ceeeeeccccccchhhhhhhhcCceEEEECHHHH---------HHHHhcchhhh---hccceEEecCCCCC---------
Confidence 9999999999999999999999999999987543 22222222211 00011222221111
Q ss_pred CCCccchhhhcccCCCCC----CceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecc
Q 006776 215 DGRDIWWQDVVPKYPTKC----EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTAD 290 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 290 (631)
.++..++...++..+... .....+..+++..+|||||||.||+.+++|..++ ..+..+...+++++.|+++.++|
T Consensus 213 ~~g~~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~-~~a~g~~~~~g~~~~DvvY~~lP 291 (649)
T KOG1179|consen 213 PDGIESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYL-QGAAGFYYVFGMTADDVVYTTLP 291 (649)
T ss_pred CchHHHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHH-HHHHHHHHHhCCCccceEEEcch
Confidence 111222333333332222 2334567889999999999999999999999854 44444556899999999999999
Q ss_pred cceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEc
Q 006776 291 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 370 (631)
Q Consensus 291 ~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~ 370 (631)
++|.+|.+..+.+++..|+|+|+-.. +++..+|+...+|+||++.-.--+.|.|++....+.+ .-..+|..+
T Consensus 292 LYHsaa~ilGi~~~l~~GaT~VlrkK----FSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~e--r~HkVRla~-- 363 (649)
T KOG1179|consen 292 LYHSAAGILGIGGCLLHGATVVLRKK----FSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEE--RQHKVRLAY-- 363 (649)
T ss_pred hHHHHHHHHHHHHHHhcCceEEEecc----cchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhh--cCceEEEEe--
Confidence 99999999999999999999999765 6899999999999999999999999999998764322 335677766
Q ss_pred cCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCc------CCCceEEeCC-CCc-----
Q 006776 371 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPF------FGVQPVIVDE-KGV----- 438 (631)
Q Consensus 371 Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~------~~~~~~i~d~-~g~----- 438 (631)
|..|-+++|+.|.+.||. ..|.+.||+||.....+ +.. .+.|.+|.-. --+++-=+|+ +|+
T Consensus 364 GNGLR~diW~~Fv~RFg~--~~IgE~YgaTEgn~~~~-N~d----~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~ 436 (649)
T KOG1179|consen 364 GNGLRPDIWQQFVKRFGI--IKIGEFYGATEGNSNLV-NYD----GRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDS 436 (649)
T ss_pred cCCCCchHHHHHHHHcCC--CeEEEEeccccCcceee-eec----CccccccchhhhhhhccceEEEEecCCCCceeecC
Confidence 777899999999999994 67999999999876444 332 2334444311 1112211232 333
Q ss_pred -----ccCCCcceeEEEecCC--C-cccccccCCchhhhh----hccccCCCeEecCceEEEccCCeEEEEeecCCeEec
Q 006776 439 -----EIEGECSGYLCIKSSW--P-GAFRTLYGDHERYET----TYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINV 506 (631)
Q Consensus 439 -----~~~~g~~Gel~v~~~~--p-~~~~gy~~~~~~~~~----~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~ 506 (631)
+|++||+|.|+-+=.- | .-+.||.+..+.+.+ ..|.+.+-||.|||+-.+|+.|++||.+|..|++.-
T Consensus 437 ~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRW 516 (649)
T KOG1179|consen 437 QGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRW 516 (649)
T ss_pred CceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceee
Confidence 4678999977654211 2 347899986544443 345555669999999999999999999999999999
Q ss_pred CceeechHHHHHHHhcCcccceEEEEeeecCC-CCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCC
Q 006776 507 SGHRIGTAEVESALVSHPQCAEAAVVGVEHEV-KGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPG 585 (631)
Q Consensus 507 ~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~ 585 (631)
.|++|++.|+|.+|.....+.|+.|+|+.-+. .|..=+|.|++.+..+.+ .+++-+++++.||+|++|..+.+.++
T Consensus 517 KGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d---~~~l~~~l~~~LP~YA~P~FlRl~~~ 593 (649)
T KOG1179|consen 517 KGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKD---LEKLYQHLRENLPSYARPRFLRLQDE 593 (649)
T ss_pred cCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcccch---HHHHHHHHHhhCccccchHHHHHHhh
Confidence 99999999999999999999999999997765 345556777777776655 78899999999999999999999999
Q ss_pred CCCCCCchhhHHHHHHH
Q 006776 586 LPKTRSGKIMRRILRKI 602 (631)
Q Consensus 586 lP~t~sGKi~r~~l~~~ 602 (631)
+++|.+=|.++..|.+.
T Consensus 594 i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 594 IEKTGTFKLQKTELQKE 610 (649)
T ss_pred hhcccchhhHHHHHHHc
Confidence 99999999999888764
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=3.5e-52 Score=440.36 Aligned_cols=397 Identities=24% Similarity=0.287 Sum_probs=326.2
Q ss_pred cHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 87 TYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 87 Ty~eL~~~v~~~A~~L~~-~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
||.||.+.+.++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+.+.++++.++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 9999999999999999999999999999999999999999999999999999999999987
Q ss_pred CcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccchhhhcccC-CCCCCceecCCCCCeE
Q 006776 166 AVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLF 244 (631)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 244 (631)
........ ....++...... ....... ...........+++++
T Consensus 81 ~~~~~~~~-------------------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~ 124 (408)
T TIGR01733 81 ALASRLAG-------------------LVLPIILVDPLE-----------------LAALDDAPAPPPPDAPSGPDDLAY 124 (408)
T ss_pred chhhhccc-------------------cCCceEEechhh-----------------hhhcccccccccccCCCCCCCcEE
Confidence 64321110 000111111000 0000000 0000011135789999
Q ss_pred EEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChh
Q 006776 245 LLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSG 324 (631)
Q Consensus 245 i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~ 324 (631)
++|||||||.||+|+++|++++.+... ....+++.++|++++..|++|.++. +.++.++..|+++++.++.... .+.
T Consensus 125 i~~TSGTtG~pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~-~~~ 201 (408)
T TIGR01733 125 VIYTSGSTGRPKGVVVTHRSLVNLLAW-LARRYGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEER-DAA 201 (408)
T ss_pred EEEcCCCCCCCCEEEeccHHHHHHHHH-HHHhcCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhcc-CHH
Confidence 999999999999999999996554444 3447788899999999999999886 5678999999999998765433 478
Q ss_pred HHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccc
Q 006776 325 RSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGG 404 (631)
Q Consensus 325 ~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~ 404 (631)
.+.+.++++++|.+.++|++++.|++... ..++++|.++++|+++++++++++.+.++ ++.+++.||+||+|.
T Consensus 202 ~~~~~~~~~~~t~l~~~p~~~~~l~~~~~-----~~~~~l~~v~~~g~~~~~~~~~~~~~~~~--~~~i~~~YG~tE~g~ 274 (408)
T TIGR01733 202 LLAALIAEHPVTVLNLTPSLLALLAAALP-----PALASLRLVILGGEALTPALVDRWRARGP--GARLINLYGPTETTV 274 (408)
T ss_pred HHHHHHHHcCceEEEeCHHHHHHHHHhhh-----hcccCceEEEEeCccCCHHHHHHHHHhCC--CcEEEecccCCceEE
Confidence 89999999999999999999999998743 46789999999999999999999999997 478999999999997
Q ss_pred eeccc-CCCCCCC--CCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccc----cCC
Q 006776 405 FMITP-LPGAWPQ--KPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----PFP 477 (631)
Q Consensus 405 ~~~~~-~~~~~~~--~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~----~~~ 477 (631)
.+... ....... ++.++|.|+++++++|+|+++++++.|+.|||++++ +.++.||+++++.+...+.. ..+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~~~~~~~ 352 (408)
T TIGR01733 275 WSTATLVDADDAPRESPVPIGRPLANTRLYVLDDDLRPVPVGVVGELYIGG--PGVARGYLNRPELTAERFVPDPFAGGD 352 (408)
T ss_pred EEEEEEcCccccCCccccccCcccCCceEEEECCCCCCCCCCCceEEEecC--ccccccccCChhhhhcceeeCCCCCCC
Confidence 66422 1111111 278899999999999999999999999999999999 99999999998877666532 223
Q ss_pred C--eEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEE
Q 006776 478 G--YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAV 531 (631)
Q Consensus 478 g--~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~v 531 (631)
| ||+|||++++|++|++++.||.||+|+++|++++|.+||++|.+|+.|.+++|
T Consensus 353 ~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 353 GARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred CceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 4 99999999999999999999999999999999999999999999999999875
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.3e-47 Score=394.37 Aligned_cols=323 Identities=23% Similarity=0.279 Sum_probs=270.7
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCC
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGA 317 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~ 317 (631)
.++++++|+|||||||.||+|+++|+++..+...... . +...++++...|++|.+|+ ..++.+++.|+++++....
T Consensus 33 ~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~-~--~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~~ 108 (358)
T PRK07824 33 IDDDVALVVATSGTTGTPKGAMLTAAALTASADATHD-R--LGGPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVELDVS 108 (358)
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHh-c--cCCCCeEEEECChHHHHHH-HHHHHHHHcCCeEEecCcC
Confidence 4689999999999999999999999996555443322 2 3345688889999999986 4567889999998885433
Q ss_pred CCCCChhHHHHHHHHhC--CcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceec
Q 006776 318 PTYPDSGRSWDIVDKYK--VTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD 395 (631)
Q Consensus 318 ~~~~~~~~~~~~i~~~~--vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~ 395 (631)
.. +++..+++.+++++ .++...+|..+..++.... ...+++++|.+++||+++++++.+++.+ ++ +++++
T Consensus 109 ~~-~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~---~~~~~~~l~~i~~gG~~l~~~~~~~~~~-~~---~~v~~ 180 (358)
T PRK07824 109 AG-FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA---ATAALAELDAVLVGGGPAPAPVLDAAAA-AG---INVVR 180 (358)
T ss_pred CC-cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc---ccCCcccceEEEECCCCCCHHHHHHHHh-cC---CcEEe
Confidence 22 48899999999998 5566778888877766432 2346789999999999999999998876 34 78999
Q ss_pred ccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhcccc
Q 006776 396 TWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP 475 (631)
Q Consensus 396 ~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~ 475 (631)
.||+||+++.+. ..|.|++++++++.| |||+++| |.++.||+++++.. .+.
T Consensus 181 ~YG~TE~~~~~~------------~~G~~~~g~~v~i~~-----------Gei~v~g--~~~~~gY~~~~~~~--~~~-- 231 (358)
T PRK07824 181 TYGMSETSGGCV------------YDGVPLDGVRVRVED-----------GRIALGG--PTLAKGYRNPVDPD--PFA-- 231 (358)
T ss_pred cccCCccCCCcC------------cCceeCCCCEEEecC-----------CEEEEec--CccccccCCCcccc--ccc--
Confidence 999999875322 258899999999843 8999999 99999999987632 222
Q ss_pred CCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCC
Q 006776 476 FPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY 555 (631)
Q Consensus 476 ~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~ 555 (631)
.+|||+|||+|++ ++|++++.||.||+||++|++|+|.+||++|.+||+|.+|+|++++++..++.++++|+...+...
T Consensus 232 ~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~ 310 (358)
T PRK07824 232 EPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAP 310 (358)
T ss_pred CCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCc
Confidence 3689999999999 899999999999999999999999999999999999999999999998889999999987765443
Q ss_pred cHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhc
Q 006776 556 SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 556 ~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 605 (631)
. .++|++++++.|+.+++|..|+++++||+|.+||++|++|++++.+
T Consensus 311 ~---~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 311 T---LEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred C---HHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 3 6789999999999999999999999999999999999999998864
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.7e-45 Score=423.30 Aligned_cols=497 Identities=15% Similarity=0.071 Sum_probs=351.6
Q ss_pred cccCCCchhHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHH
Q 006776 45 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 124 (631)
Q Consensus 45 ~wf~~~~~n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~ 124 (631)
+|-+-...+++.+++.+.++ .+|+++|+.+.... +..+.+||+|+.+++.++|.+|.++|+++||+|+|+++|+++|+
T Consensus 419 ~~~~~~~~~Tl~dll~~~a~-~~pd~~al~~~~~~-g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewv 496 (1452)
T PTZ00297 419 EYNPLAGVRSLGEMWERSVT-RHSTFRCLGQTSES-GESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIV 496 (1452)
T ss_pred cCCCcccCCCHHHHHHHHHH-HCCCCeEEEEeccC-CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH
Confidence 44444555678889999888 79999999753111 33578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCC
Q 006776 125 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 204 (631)
Q Consensus 125 v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 204 (631)
++++||+++|++.+|+++ +.+++.+++++++++++|+++... ..+.+. .. +.++++++++...
T Consensus 497 ia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l---------~kl~~i---~~---~~Lr~IIv~d~~~ 559 (1452)
T PTZ00297 497 ILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSV---------AAILTC---RS---RKLETVVYTHSFY 559 (1452)
T ss_pred HHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHH---------HHHHhh---cc---cCCcEEEEECCCc
Confidence 999999999999999975 467999999999999999975422 112111 11 4688888875321
Q ss_pred ccccccCcCC-CCCccchhhhcccCCC--CCCceecCCCCCeEEEe---CCCCCCCCceEEEcCchHHHHHHHHHHHh--
Q 006776 205 AMTRENTKWQ-DGRDIWWQDVVPKYPT--KCEVEWVDAEDPLFLLY---TSGSTGKPKGVLHTTGGYMVHTATTFKYA-- 276 (631)
Q Consensus 205 ~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~---TSGTTG~PK~v~~t~~~~l~~~~~~~~~~-- 276 (631)
.......... ....+.|++++..... ........++|++.|+| ||||||.||||++||+|++.+........
T Consensus 560 ~~~~~~~~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~ 639 (1452)
T PTZ00297 560 DEDDHAVARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVL 639 (1452)
T ss_pred ccccccccccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccc
Confidence 0000000000 0113457777654321 11122346788999986 99999999999999999776665543321
Q ss_pred cCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccc
Q 006776 277 FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV 356 (631)
Q Consensus 277 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~ 356 (631)
....++|++++++|+.|+++. ...+.++..|+++.. ++++.+++.|++++||+++++|++++.+.+......
T Consensus 640 ~~~~~~D~~Ls~LPLaHI~er-~~~~~~l~~G~~I~~-------~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~ 711 (1452)
T PTZ00297 640 PSSFKKHLMVHFTPFAMLFNR-VFVLGLFAHGSAVAT-------VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRAN 711 (1452)
T ss_pred cCCCCCCEEEEechHHHHHHH-HHHHHHHHcCCEEEe-------CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHh
Confidence 245678999999999999985 455777889998863 367899999999999999999999998854311100
Q ss_pred c------------------------ccC----------------CCceeEEEEccC--CCCHhHHHHHHHHhCCCCccee
Q 006776 357 T------------------------RYS----------------RKSLRVLGSVGE--PINPSAWRWFFNVVGDSRCPIS 394 (631)
Q Consensus 357 ~------------------------~~~----------------l~~lr~v~~~Ge--~l~~~~~~~~~~~~~~~~~~i~ 394 (631)
. +.. =..+|.+++||. +++..+. . .+++.
T Consensus 712 ~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~-----~----~i~i~ 782 (1452)
T PTZ00297 712 ERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL-----E----HISVC 782 (1452)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----C----CceEE
Confidence 0 000 035888888873 4443322 1 26788
Q ss_pred cccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccc
Q 006776 395 DTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK 474 (631)
Q Consensus 395 ~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~ 474 (631)
.+||+||.. +.+.++. .. ..|.|+|+++++|.+.+...-. +..|||++++ ++|++++.+.+
T Consensus 783 ~g~glTE~~---~~~~~~~--~~--~~G~PlpgvEvKI~~~~E~~~~-~~~GEIlvr~---------~kdpe~T~e~~-- 843 (1452)
T PTZ00297 783 YVPCLREVF---FLPSEGV--FC--VDGTPAPSLQVDLEPFDEPSDG-AGIGQLVLAK---------KGEPRRTLPIA-- 843 (1452)
T ss_pred EecceEEee---eecCCCC--cc--cCCeecCceEEEEcccccccCC-CCCCeEEEEE---------CCChHHHHHhh--
Confidence 899999943 2233332 12 2399999999999864221111 2359999965 57888776632
Q ss_pred cCCCeEecCceEEEccCCeEEEEeecCCeEecC-ceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCC
Q 006776 475 PFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV 553 (631)
Q Consensus 475 ~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~-G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~ 553 (631)
+||+ +||+|+|+||++|+||.+ |++|.|..||+.+.++|.|.+++|+|...+ .++|+|+++...
T Consensus 844 --~gW~---------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k----~lvALVvpd~e~ 908 (1452)
T PTZ00297 844 --AQWK---------RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR----PIIAIVSPNRDT 908 (1452)
T ss_pred --CcCc---------cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC----ceEEEEEeCHHH
Confidence 4664 799999999999999997 999999999999999999999999986443 288888876311
Q ss_pred C--------------------CcHHHHH----HHHHH---HHh--hcCCCccCceEEECC-CC-----CCCCCchhhHHH
Q 006776 554 P--------------------YSEELRK----SLVLA---VRK--QIGAFAAPDKIHWAP-GL-----PKTRSGKIMRRI 598 (631)
Q Consensus 554 ~--------------------~~~~~~~----~i~~~---~~~--~l~~~~~p~~i~~v~-~l-----P~t~sGKi~r~~ 598 (631)
- ...++.+ .+++. +.+ .+....+++.+.+++ ++ -.|++.|+.|+.
T Consensus 909 l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~ 988 (1452)
T PTZ00297 909 VEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDA 988 (1452)
T ss_pred HHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHH
Confidence 0 0122211 23222 222 255567787766643 44 479999999999
Q ss_pred HHHHHhcCcCCCC
Q 006776 599 LRKIASRQLDELG 611 (631)
Q Consensus 599 l~~~~~~~~~~~~ 611 (631)
+.+.|.+++++++
T Consensus 989 I~~kY~~~Ie~LY 1001 (1452)
T PTZ00297 989 VHSYFSSVIERFY 1001 (1452)
T ss_pred HHHHHHHHHHHHh
Confidence 9999988766554
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3e-39 Score=361.16 Aligned_cols=415 Identities=21% Similarity=0.240 Sum_probs=333.5
Q ss_pred HhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHh
Q 006776 54 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 133 (631)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~ 133 (631)
.++..+...+. ..|++.|+++. ...+||+||..++.++|+.|.+.|++++++|+++++.+++++++++|+++.
T Consensus 228 ~i~~~f~~~a~-~~p~~~a~~~~------~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilka 300 (642)
T COG1020 228 TIHLLFEEQAA-TTPDAVALVRG------GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKA 300 (642)
T ss_pred hHHHHHHHHHH-hCCCceeEecC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhc
Confidence 46677777777 79999998854 578999999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcC
Q 006776 134 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 213 (631)
Q Consensus 134 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 213 (631)
|+.++|+++.++.+++..++++++++.+++........... +. +.++...
T Consensus 301 G~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~-----------------~~----~~~~~~~--------- 350 (642)
T COG1020 301 GAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGL-----------------PG----LALDDAL--------- 350 (642)
T ss_pred CCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccC-----------------Cc----ccccccc---------
Confidence 99999999999999999999999999999884322100000 00 0000000
Q ss_pred CCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccce
Q 006776 214 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 293 (631)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 293 (631)
+. ..... .......+++.+|++|||||||.||||..+|++... ........+.+...|+++...++.+
T Consensus 351 -------~~--~~~~~--~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~-~~~~~~~~~~~~~~d~~l~~~s~~f 418 (642)
T COG1020 351 -------SE--IPDTD--PIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALAN-LLNDAGARFGLDADDRVLALASLSF 418 (642)
T ss_pred -------cc--CCccC--cccccCCCCCeEEEEEccCCCCCCCCceecCHHHHH-HHHHHHHhcCCCcccEEeecCCccc
Confidence 00 00000 001224568999999999999999999999999544 4455555588999999999998877
Q ss_pred ecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCC
Q 006776 294 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 373 (631)
Q Consensus 294 ~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~ 373 (631)
... .+.++.+++.|+++++...... .++..+.+.+.++++|++..+|.++..+...............+|.+++|||.
T Consensus 419 D~~-~~~~f~~l~~G~~l~~~~~~~~-~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~ 496 (642)
T COG1020 419 DAS-VFEIFGALLEGARLVLAPALLQ-VDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEA 496 (642)
T ss_pred chh-HHHHHHHHhCCCEEEecCcccc-CCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCC
Confidence 665 4788999999999999876544 48999999999999999999999999998763221222233459999999999
Q ss_pred CCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecC
Q 006776 374 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 453 (631)
Q Consensus 374 l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~ 453 (631)
++..+...+...... ...+.+.||.||+..................+|.|+++..+.|+|+.+++++.|..|||++.|
T Consensus 497 l~~~~~~~~~~~~~~-~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~gel~i~g- 574 (642)
T COG1020 497 LPLALVQRLLQLAAL-ARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVPGELYIAG- 574 (642)
T ss_pred CCHHHHHHHHHhccc-cceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCCeeeEECC-
Confidence 999999988887643 368999999999554333221111111145799999999999999999999999999999999
Q ss_pred CCcccccccCCchhhhhhccccCCCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCc
Q 006776 454 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHP 524 (631)
Q Consensus 454 ~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~ 524 (631)
.++..||+++++.+...|... .+|+|||++++.+||.+.++||.|+++|++|+||.+.|||..+.++|
T Consensus 575 -~~~a~gy~~~p~lt~~~f~~~--~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 575 -LGLALGYLNRPDLTAERFIAL--RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred -cchhhhhcCChhhhHHHhhhc--cCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 999999999999998888753 48999999999999999999999999999999999999999998875
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=1.4e-39 Score=335.18 Aligned_cols=291 Identities=22% Similarity=0.293 Sum_probs=230.8
Q ss_pred CCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCC--CCcEEEEecccceecchhHHHHHhhhcCceEEEecC
Q 006776 239 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK--PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 316 (631)
Q Consensus 239 ~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~ 316 (631)
.++.++++|||||||.||+|+++|+++..... .....+++. +.+++++.+|++|+.|..+.++.++..|+++++...
T Consensus 94 ~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~ 172 (386)
T TIGR02372 94 TPTARFTFATSGSTGTPKPVTHSWAALLSEAQ-AIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA 172 (386)
T ss_pred CCCceEEEECCCCCCCCceeEeeHHHHHHHHH-HHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC
Confidence 35688999999999999999999999654443 333345554 346899999999999987778888999999998754
Q ss_pred CCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecc
Q 006776 317 APTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDT 396 (631)
Q Consensus 317 ~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~ 396 (631)
+++..+++.++.+ +++.++|++++.|.+.. .++++++. ++||+++++++++.+.+. +. ..+++.
T Consensus 173 ----~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~------~~l~slr~-i~gGa~l~~~l~~~~~~~-g~--~~v~~~ 236 (386)
T TIGR02372 173 ----APASGIMRHARPG--DLIVGTPFIWEQLADLD------YRLPGVVG-VSSGAPSTAATWRCLLAA-GL--ARLLEV 236 (386)
T ss_pred ----CChHHHHHhhccC--CEEEECcHHHHHHHhhC------cCCCccee-EecCCCCCHHHHHHHHHh-cc--cchhhe
Confidence 3677788777643 89999999999998753 24567876 678999999999999875 41 468999
Q ss_pred cccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhccccC
Q 006776 397 WWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 476 (631)
Q Consensus 397 yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~ 476 (631)
||+||++++.+.. .++..+.++|++++.+ + ++. + .| |
T Consensus 237 YG~TEt~~i~~~~-------~~~~~~~~~p~~~~~~-~-~~~--------~---~g--~--------------------- 273 (386)
T TIGR02372 237 YGATETGGIGLRE-------APDDPFRLLPDLACFA-D-TLS--------S---AG--L--------------------- 273 (386)
T ss_pred ecccccccccccc-------CCCCCcccCCCccccC-C-Ccc--------C---CC--c---------------------
Confidence 9999998754321 1234567777766543 1 110 0 02 1
Q ss_pred CCeEecCceEEEccCCeEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCc
Q 006776 477 PGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS 556 (631)
Q Consensus 477 ~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~ 556 (631)
..|++|||++++|++|+++|+||+||+||++|++|+|.+||++|.+||+|.+++|+. .++.+.++|+++++...
T Consensus 274 ~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~- 347 (386)
T TIGR02372 274 ARRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADE- 347 (386)
T ss_pred cceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCCh-
Confidence 126899999999999999999999999999999999999999999999999998862 46789999998865432
Q ss_pred HHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhh
Q 006776 557 EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 595 (631)
Q Consensus 557 ~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~ 595 (631)
+.+.++|+++++++++++++|..+.++++||+|++||++
T Consensus 348 ~~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 348 AELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 345678999999999999999999999999999999974
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=7.4e-38 Score=330.90 Aligned_cols=329 Identities=18% Similarity=0.188 Sum_probs=244.6
Q ss_pred cCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHH--HHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEe
Q 006776 237 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 314 (631)
Q Consensus 237 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~ 314 (631)
.+.++++++++||||||.||++.++|.++..+... .....++++++|++++..+.++..+.....+.++..|++++..
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 35678899999999999999999999986544322 2233468899999988777766555444456778889998876
Q ss_pred cCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCccee
Q 006776 315 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 394 (631)
Q Consensus 315 ~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~ 394 (631)
... +++.+++.|++++|+++.++|+++..|.+............++|.++++||++++++.+.+.+.+| ++++
T Consensus 152 ~~~----~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g---~~v~ 224 (422)
T TIGR02155 152 SGG----QTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG---MKAT 224 (422)
T ss_pred CCC----CHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC---CceE
Confidence 542 568899999999999999999999999865322111122358999999999999999999999997 7899
Q ss_pred cccccccccce-ecccCCCCCCCCCCCcCCCc--CCCceEEeCC-CCcccCCCcceeEEEecCCCcccccccCCchhhhh
Q 006776 395 DTWWQTETGGF-MITPLPGAWPQKPGSATFPF--FGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYET 470 (631)
Q Consensus 395 ~~yg~tE~g~~-~~~~~~~~~~~~~~~~G~p~--~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~ 470 (631)
+.||+||+++. +...... .. .|.++ +++.++|+|+ +|+++++|+.|||++++ .. ..
T Consensus 225 ~~YG~tE~~~~~~~~~~~~---~~---~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~--~~------------~~ 284 (422)
T TIGR02155 225 DIYGLSEVIGPGVAMECVE---TQ---DGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTT--LT------------KE 284 (422)
T ss_pred ecccchhhcCCceeecccc---cC---CCceEecCeeEEEEECCCCCCCCCCCCeeEEEEec--CC------------cc
Confidence 99999998532 2211110 11 22333 3567789995 89999999999999998 21 01
Q ss_pred hccccCCCeEecCceEEEccC-C-----eEEEEeecCCeEecCceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEE
Q 006776 471 TYFKPFPGYYFTGDGCSRDKD-G-----YHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIY 544 (631)
Q Consensus 471 ~~~~~~~g~~~TGDl~~~~~d-G-----~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~ 544 (631)
.+ ..+||+|||+++++++ | .+++.||.||+|+++|.+|+|.+||.+|.+||+|...+.+.+......+.+.
T Consensus 285 ~~---p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~ 361 (422)
T TIGR02155 285 AL---PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELT 361 (422)
T ss_pred cc---ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEE
Confidence 11 1369999999999876 4 4789999999999999999999999999999999855555555544445677
Q ss_pred EEEEeCCCCC------CcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHH
Q 006776 545 AFVTLVEGVP------YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 597 (631)
Q Consensus 545 ~~v~~~~~~~------~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~ 597 (631)
++|+..++.. ..+.+.++|.+.+++.++.+.. ..+..+++||+|+ ||+.|.
T Consensus 362 ~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 362 LKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 7777764431 1133467889999998876532 2233357999988 998764
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-31 Score=292.88 Aligned_cols=509 Identities=19% Similarity=0.210 Sum_probs=326.7
Q ss_pred hhhhhhccCCCCeeEEEE---EcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhC
Q 006776 58 CLDRNIEAGLGDKVAIYW---EANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 134 (631)
Q Consensus 58 ~l~~~~~~~~~~~~A~~~---~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G 134 (631)
.+.+.+. ..|+..+..+ .... +.-..+||++.+..++.+++.|...|...|+.|+++|..+.++++..+|.++.|
T Consensus 41 ~~~~~~~-~~~~~~~~~~~p~~~~~-~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g 118 (1032)
T KOG1178|consen 41 SFRRELA-EAPENTGHVIIPTASES-GIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAG 118 (1032)
T ss_pred HHHHHHh-hcccCCCceEeeccccc-ccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcc
Confidence 3444444 4565555433 2222 456789999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCC
Q 006776 135 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 214 (631)
Q Consensus 135 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 214 (631)
..+++++|.++..++..++...-. . .++. .. +.....+..+....+.. ++.. + .
T Consensus 119 ~~~~~idp~~~~~e~~~~~~~ia~-~-~~s~-~~---~i~~~l~i~~~~~~~~~---~~~s-v---~------------- 172 (1032)
T KOG1178|consen 119 LTFLPIDPSWPNSELAGYLMRIAH-F-LTSV-EL---EIVRRLNIIDILLNSLF---PKLS-V---E------------- 172 (1032)
T ss_pred eEEEEecCCCcccccchHHHhhhh-h-heec-cc---eehhhhhhHHHHhhccc---cccc-h---h-------------
Confidence 999999999982222221211110 0 0010 00 00011111111111110 0000 0 0
Q ss_pred CCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEeccccee
Q 006776 215 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 294 (631)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 294 (631)
.. .-.+.. .............-+++.+.+.||||+||.||+|.-+|.. +++...+....+.....+++-....++.
T Consensus 173 ~~-~~~f~~-~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~s-l~~~fdw~~~~f~~t~s~~~~~~~~~~~- 248 (1032)
T KOG1178|consen 173 TI-ADSFQM-VLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFS-LANAFDWMFTTFPPTGSDRFTFKTSVYF- 248 (1032)
T ss_pred hc-cchhhh-hhccCCCcceeeecccccceEeecccccccccccchhHHH-HHhhhhhccccCCcCccchhhhhheeec-
Confidence 00 000000 0111111122234567799999999999999999999998 4555555555567776776522222222
Q ss_pred cchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccc-----------cccCCCc
Q 006776 295 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV-----------TRYSRKS 363 (631)
Q Consensus 295 ~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~-----------~~~~l~~ 363 (631)
...+....++++..+..++++.......+..+.+.+++++++.++.+|++.+.++....... .....+.
T Consensus 249 ~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~ 328 (1032)
T KOG1178|consen 249 DDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSC 328 (1032)
T ss_pred ccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchh
Confidence 22334445555555555555433333347899999999999999999999888876543310 0112247
Q ss_pred eeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCC-----CCCCCcCC----CcCCCceEEeC
Q 006776 364 LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWP-----QKPGSATF----PFFGVQPVIVD 434 (631)
Q Consensus 364 lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~-----~~~~~~G~----p~~~~~~~i~d 434 (631)
|+...++||+...+++..+...+.. .-...-|+.++..+........... .....+.+ --+...+.+..
T Consensus 329 Lkl~~~~~ep~~v~l~~s~~~~~~~--~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~ 406 (1032)
T KOG1178|consen 329 LKLVVLGGEPLLVSLYTSTFDLLAE--IFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY 406 (1032)
T ss_pred heeeeecCCccchhhhhhhhhcccc--eeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeee
Confidence 9999999999999998866655442 2223337777766544332111100 00000000 01123444555
Q ss_pred CCCcccCCCcceeEEEecCC--CcccccccCCchhhhhhc--c-ccCCCeEecCceEEEccCCeEEEEeecCCeEecCce
Q 006776 435 EKGVEIEGECSGYLCIKSSW--PGAFRTLYGDHERYETTY--F-KPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGH 509 (631)
Q Consensus 435 ~~g~~~~~g~~Gel~v~~~~--p~~~~gy~~~~~~~~~~~--~-~~~~g~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~ 509 (631)
..|.+.+.++.+......-+ +.+..| +..++.....+ + ...+.+|+|||+|+..++|.+.+.||.|++||.+|.
T Consensus 407 ~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~ 485 (1032)
T KOG1178|consen 407 RAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGV 485 (1032)
T ss_pred ccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccE
Confidence 55555555433333322210 223333 23333322221 1 111338999999999999999999999999999999
Q ss_pred eechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCC
Q 006776 510 RIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKT 589 (631)
Q Consensus 510 ~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t 589 (631)
|+...||+.++..||.|.++.+....+..-++.+++||+.+..... .+...|++++.++|..|++|..++.++.+|.|
T Consensus 486 Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~--~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~ 563 (1032)
T KOG1178|consen 486 RIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKS--VLIRDIRNYLKKELASYMLPSLVVPLAKVPLN 563 (1032)
T ss_pred EEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCc--hhHHHHHHhhcccccceecceEEEEhhhCCcC
Confidence 9999999999999999999999999988889999999998876553 34788999999999999999999999999999
Q ss_pred CCchhhHHHHHHHH
Q 006776 590 RSGKIMRRILRKIA 603 (631)
Q Consensus 590 ~sGKi~r~~l~~~~ 603 (631)
++||+++++|.+..
T Consensus 564 ~~GKvDkkaL~~~~ 577 (1032)
T KOG1178|consen 564 PNGKVDKKALLEYN 577 (1032)
T ss_pred CCCCcChhhhhhhh
Confidence 99999999999933
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.98 E-value=2.5e-30 Score=273.47 Aligned_cols=330 Identities=17% Similarity=0.120 Sum_probs=220.6
Q ss_pred cCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHH--HHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEe
Q 006776 237 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF--KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 314 (631)
Q Consensus 237 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~ 314 (631)
++.++++.|++||||||.||++.+||.++..+..... ....+++++|+++...+.++..|.....++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 4567889999999999999999999998654433221 22358999999999988888776545556677788886543
Q ss_pred cCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCccee
Q 006776 315 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 394 (631)
Q Consensus 315 ~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~ 394 (631)
. .....+++|++++++++.++|+.+..|.+...+........++|.+++|||++++++.+++.+.+| ++++
T Consensus 163 ~------~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g---~~v~ 233 (445)
T TIGR03335 163 G------KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWG---CEVY 233 (445)
T ss_pred C------chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhC---CcEE
Confidence 2 224568999999999999999998877754321111112468999999999999999999999987 7899
Q ss_pred cccccccccceecccCCCCCCCCCCCcCCCc--CCCceEEeCCC-CcccCCCcceeEEEecCCCcccccccCCchhhhhh
Q 006776 395 DTWWQTETGGFMITPLPGAWPQKPGSATFPF--FGVQPVIVDEK-GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETT 471 (631)
Q Consensus 395 ~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~--~~~~~~i~d~~-g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~ 471 (631)
+.||+||++.... +.. ..|..+ +.+.++|+|++ +.++++|+.|||++++ +++...+....
T Consensus 234 ~~YG~TE~~~~~~--c~~-------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~--------L~~~~~r~~~P 296 (445)
T TIGR03335 234 NTYGSTEGTMCGE--CQA-------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTT--------LLKPGERCGSL 296 (445)
T ss_pred ecCChhhhhheEE--ecC-------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEe--------cCCCCccCCce
Confidence 9999999863221 111 113333 45789999986 4678999999999998 22211111122
Q ss_pred ccccCCCeEecCceEEEcc-C----C----eEEEEeecCCeEecCceeechHHHHHHHhcC---cccc-eEEEEeeecCC
Q 006776 472 YFKPFPGYYFTGDGCSRDK-D----G----YHWLTGRVDDVINVSGHRIGTAEVESALVSH---PQCA-EAAVVGVEHEV 538 (631)
Q Consensus 472 ~~~~~~g~~~TGDl~~~~~-d----G----~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~---~~V~-~~~vv~~~~~~ 538 (631)
+.+ |+|||++++.. + | .+...||+||+++++|.+|+|.+||++|.++ +++. +..++......
T Consensus 297 liR-----YrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~ 371 (445)
T TIGR03335 297 LIN-----YDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEE 371 (445)
T ss_pred EEE-----eecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCC
Confidence 333 99999999632 2 3 2445799999999999999999999999995 5554 33333222222
Q ss_pred CCeeEEEEEEeCCCCCC-cHHHHHHHHHH----HHh---hcCCCccCceEEEC--CCCCCCC-CchhhHH
Q 006776 539 KGQGIYAFVTLVEGVPY-SEELRKSLVLA----VRK---QIGAFAAPDKIHWA--PGLPKTR-SGKIMRR 597 (631)
Q Consensus 539 ~~~~~~~~v~~~~~~~~-~~~~~~~i~~~----~~~---~l~~~~~p~~i~~v--~~lP~t~-sGKi~r~ 597 (631)
....+.+.|...+.... .+++.+++.+. +++ .+....+...+.++ ..||+++ .||..|-
T Consensus 372 ~~~~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r~ 441 (445)
T TIGR03335 372 GEITLRVSLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKRL 441 (445)
T ss_pred CCceEEEEEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCceee
Confidence 22245555666554321 13334444443 211 11112222334444 4799984 6887653
No 126
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=1.2e-27 Score=253.27 Aligned_cols=519 Identities=15% Similarity=0.125 Sum_probs=344.5
Q ss_pred hHhhhhhhhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCC-CCCCCEEEEEccCChHHHHHHHHHH
Q 006776 53 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIG-VKKGDAVIIYLPMLMELPIAMLACA 131 (631)
Q Consensus 53 n~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~G-v~~gd~V~i~~~n~~~~~v~~lA~~ 131 (631)
-++.++|+..++ +.|+.+|+...+.++.+..++||++|..+|.+++..|...+ ++.||+|+++.|+++|++++++||+
T Consensus 770 ~~ile~Lq~R~a-~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cl 848 (1363)
T KOG3628|consen 770 LTILEILQWRAA-KTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACL 848 (1363)
T ss_pred HHHHHHHHHHhh-cCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHH
Confidence 466788888887 89999999988777677889999999999999999998654 8999999999999999999999999
Q ss_pred HhCCEEEecCCCC------CHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCc
Q 006776 132 RIGAVHSVVFAGF------SSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSA 205 (631)
Q Consensus 132 ~~G~v~v~l~~~~------~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 205 (631)
.+|.+++|+.|-- ....+..+++.++++.|+++.......+..+....++. ..+..+++.+....
T Consensus 849 y~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~---------s~~p~i~~~~~~~~ 919 (1363)
T KOG3628|consen 849 YLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQ---------SAIPLILVLPKLPE 919 (1363)
T ss_pred hcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhh---------hcchhhhcccccch
Confidence 9999999998742 34668899999999999998754322111111111110 11122222221110
Q ss_pred cccccCcCCCCCccchhhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEE
Q 006776 206 MTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 285 (631)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~ 285 (631)
.+. .-.....+.....++.....+.+|++-|.--++|.--++.++|.. +.+..........+.+..-+
T Consensus 920 ------t~~-----k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHss-lla~Ck~iKe~~~l~~~rpl 987 (1363)
T KOG3628|consen 920 ------TIR-----KRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSS-LLAFCKIIKETCQLYKSRPL 987 (1363)
T ss_pred ------hhh-----hhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHH-HHHHHHHHHHHHccccCCce
Confidence 000 000001111111222334568899999998899999999999998 55555666666677776667
Q ss_pred EEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCcc-----ccccC
Q 006776 286 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY-----VTRYS 360 (631)
Q Consensus 286 ~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~-----~~~~~ 360 (631)
+...+..-..|+....+...+.|.+.++........++..+++.|++++|.-++.+=..+..+.+..... ....+
T Consensus 988 ~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn 1067 (1363)
T KOG3628|consen 988 LGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNN 1067 (1363)
T ss_pred EEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcc
Confidence 7666766667776666777889999888776666668999999999999998888888887776643211 11223
Q ss_pred CCceeEEEEccCCCCHhHHHHHHHHhC---CCCcceecccccccccceecccCCCCCC----------------------
Q 006776 361 RKSLRVLGSVGEPINPSAWRWFFNVVG---DSRCPISDTWWQTETGGFMITPLPGAWP---------------------- 415 (631)
Q Consensus 361 l~~lr~v~~~Ge~l~~~~~~~~~~~~~---~~~~~i~~~yg~tE~g~~~~~~~~~~~~---------------------- 415 (631)
+++ ..++..-++....+..-|.+.+. -..-.+...|+.--.-.++...+.+..+
T Consensus 1068 ~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~a 1146 (1363)
T KOG3628|consen 1068 TSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGA 1146 (1363)
T ss_pred ccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCC
Confidence 333 34444445555555555554442 1111233333332211111111111000
Q ss_pred ---CCCCCcCCCcCCCceEEeCC-CCcccCCCcceeEEEecCCCcccccccCCchhhh-----hhccc---cCCCeEecC
Q 006776 416 ---QKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYE-----TTYFK---PFPGYYFTG 483 (631)
Q Consensus 416 ---~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~-----~~~~~---~~~g~~~TG 483 (631)
...-..|...+++++.|++| +-.+|.+|+.||||+.+ ..-..+|++..+... ..... ...+|-|||
T Consensus 1147 p~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S--~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG 1224 (1363)
T KOG3628|consen 1147 PHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNS--AHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTG 1224 (1363)
T ss_pred CCccccccCCcccccceeEEeCCccccccccCCcceEEecc--ccccccccccCchhhhhhhhhhccccccccccceeee
Confidence 01123477778999999998 45689999999999999 666666665322121 11111 123599999
Q ss_pred ceEEEcc------C----CeEEEEeecCCeEecCceeechHHHHHHHh-cCcccceEEEEeeecCCCCeeEEEEEEeCCC
Q 006776 484 DGCSRDK------D----GYHWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG 552 (631)
Q Consensus 484 Dl~~~~~------d----G~l~i~GR~dd~i~~~G~~i~~~eIE~~l~-~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~ 552 (631)
|+|+... + ..+|++|-.++.+.++|.+.+|.+||..+. .||.|.+|+|+- .+..+++++.+...
T Consensus 1225 ~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~-----~~glvVvviE~~gq 1299 (1363)
T KOG3628|consen 1225 DLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQ-----ATGLVVVVIECHGQ 1299 (1363)
T ss_pred eeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEe-----eCCeEEEEEEecCc
Confidence 9999742 2 358999999999999999999999999886 699999999993 45557777776652
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCccC-ceEEECC--CCCCCCCchhhHHHHHHHHhc
Q 006776 553 VPYSEELRKSLVLAVRKQIGAFAAP-DKIHWAP--GLPKTRSGKIMRRILRKIASR 605 (631)
Q Consensus 553 ~~~~~~~~~~i~~~~~~~l~~~~~p-~~i~~v~--~lP~t~sGKi~r~~l~~~~~~ 605 (631)
+.-.++.--|.. .-|..|.+. ..+.||+ .+|+.+.|..+|..+++.+.+
T Consensus 1300 -~~~~~LvPlIv~---~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~ 1351 (1363)
T KOG3628|consen 1300 -QELADLVPLIVN---VVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLA 1351 (1363)
T ss_pred -hhHhhhhHHHHH---HHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHh
Confidence 111222223333 334444443 3566666 799999999999999887654
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=3e-27 Score=236.46 Aligned_cols=328 Identities=21% Similarity=0.221 Sum_probs=236.8
Q ss_pred ecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEE
Q 006776 236 WVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 313 (631)
Q Consensus 236 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl 313 (631)
..+.++...|-.||||||+|+-+.+++.....+.. .......+...+|++......+..+|....-+++--.|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 34567777799999999999999999987443332 2223356888999988777666666654455666667777665
Q ss_pred ecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcce
Q 006776 314 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPI 393 (631)
Q Consensus 314 ~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i 393 (631)
..+. +.+..+++++.+++|++.++|+.+..|.+...+......-.+||.+++|+|+++++.++.+.+.+| +.+
T Consensus 166 ~~~g----~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g---~~~ 238 (438)
T COG1541 166 ISGG----NTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG---CKA 238 (438)
T ss_pred cCCc----cHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC---Cce
Confidence 5442 678899999999999999999999999987654322334578999999999999999999999998 788
Q ss_pred ecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCC-CCcccCCCcceeEEEecCCCcccccccCCchhhhhhc
Q 006776 394 SDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTY 472 (631)
Q Consensus 394 ~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~ 472 (631)
++.||+||..++.+..+... ...-.+-+...++|+|| +|+.+++|+.|||+++. +.+ ....+
T Consensus 239 ~diYGltE~~g~g~~eC~~~-----~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~---------L~~---~~~Pl 301 (438)
T COG1541 239 FDIYGLTEGFGPGAGECTER-----NGLHIWEDHFIFEIVDPETGEQLPDGERGELVITT---------LTK---EGMPL 301 (438)
T ss_pred eeccccccccCCcccccccc-----cCCCcchhhceeeeecCCcCccCCCCCeeEEEEEe---------ccc---cCcce
Confidence 99999999977632111111 11112335688999996 89999999999999998 111 11223
Q ss_pred cccCCCeEecCceEEEccC----Ce-----EEEEeecCCeEecCceeechHHHHHHHhcCcccc-eEEEEeeecCCCCee
Q 006776 473 FKPFPGYYFTGDGCSRDKD----GY-----HWLTGRVDDVINVSGHRIGTAEVESALVSHPQCA-EAAVVGVEHEVKGQG 542 (631)
Q Consensus 473 ~~~~~g~~~TGDl~~~~~d----G~-----l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~~~V~-~~~vv~~~~~~~~~~ 542 (631)
.+ |+|||+..+..+ |. ..|.||+||++++.|.+|+|..||.+|.+.+.+. +..++... ......
T Consensus 302 IR-----YrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~ 375 (438)
T COG1541 302 IR-----YRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDE 375 (438)
T ss_pred EE-----EEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCce
Confidence 33 999999998763 33 4689999999999999999999999999999999 66666555 444566
Q ss_pred EEEEEEeCCCCCCcHH---HHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhh
Q 006776 543 IYAFVTLVEGVPYSEE---LRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 595 (631)
Q Consensus 543 ~~~~v~~~~~~~~~~~---~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~ 595 (631)
+.+.|++.++...... +.+++...+...++ ..+--.++.+..+|+|.. |..
T Consensus 376 L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~v~~v~~g~l~r~~~-K~k 429 (438)
T COG1541 376 LTVRVELENEAEELEDERRLAKKLIKNIKSELG-VRVEVELVEPGELPRTEG-KAK 429 (438)
T ss_pred EEEEEEecCcccchHHHHHHHHHHHHHHHhhcC-CceEEEEEeccceecccC-cee
Confidence 7788888764222222 22455555555553 112223444569999974 543
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=2.7e-26 Score=218.99 Aligned_cols=223 Identities=17% Similarity=0.130 Sum_probs=162.4
Q ss_pred hhhhccCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEE
Q 006776 60 DRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIGAVHS 138 (631)
Q Consensus 60 ~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v 138 (631)
+.++. .+|+++|+++.++..+..+++||+||.+++.++|++|++ +|+++||+|+|++||++++++++|||+++|++++
T Consensus 3 ~~~~~-~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 3 SPLLA-ADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhh-hCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 44445 689999999753321135689999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCc
Q 006776 139 VVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRD 218 (631)
Q Consensus 139 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 218 (631)
|++ .+++++++++++...... . + +.++.+............. ....
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~--------------~----~--~~~~~~~~~~~~~~~~~~~-~~~~ 127 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAA--------------G----S--GEVVALSLDPLGRRVAGEL-PPGV 127 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcc--------------c----C--CceEEEeccccccCCCCCC-CCcc
Confidence 995 689999999876432110 0 1 2233321100000000000 1112
Q ss_pred cchhhhcccCCCCCCce-ecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHhcCCCCCcEEEEecccceecch
Q 006776 219 IWWQDVVPKYPTKCEVE-WVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGH 297 (631)
Q Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~ 297 (631)
..|.+..........+. ...++|++.|+||||| +|++++.+. ...+++++|+++ .+|++|+.|.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~-----~~~~l~~~D~~l-~~Pl~H~~gl 192 (227)
T TIGR03089 128 IDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA-----RAAGLPPGDRVL-VLAWTDLEDF 192 (227)
T ss_pred cchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH-----hhcCCCCCCeEE-ecCCCchHHH
Confidence 34555444322222222 3567999999999986 566655544 456889999999 9999999998
Q ss_pred hHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCc
Q 006776 298 SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 336 (631)
Q Consensus 298 ~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt 336 (631)
...++.+|..|+++++++. ++++.+++.|+++|||
T Consensus 193 ~~~~~~~l~~G~t~v~~~r----Fd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 193 LATLLAPLAAGGSLVLVTH----PDPARLDQIAETERVT 227 (227)
T ss_pred HHHHHHHhccCceEEEecC----CCHHHHHHHHHhhcCC
Confidence 8889999999999999853 6999999999999987
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=5.3e-24 Score=214.45 Aligned_cols=140 Identities=28% Similarity=0.363 Sum_probs=125.0
Q ss_pred CCCeEecCceEEE-ccCCeEEEEeecCCeEecCc---eeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCC
Q 006776 476 FPGYYFTGDGCSR-DKDGYHWLTGRVDDVINVSG---HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE 551 (631)
Q Consensus 476 ~~g~~~TGDl~~~-~~dG~l~i~GR~dd~i~~~G---~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~ 551 (631)
.+|||+|||+|++ |+||+++|.||.+ +| ++|+|. ||++|.+||+|.+|+|+|++++..|+.++|||++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 3799999999998 7999999999998 78 799999 999999999999999999999999999999999874
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCCCCCCCchhhHHHHHHHHhcCcCCCCCCCCCCChHHHHHHHhhh
Q 006776 552 GVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 629 (631)
Q Consensus 552 ~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (631)
. .+ .++|+++|+++|+. ++|+.++++++||+|++||++|+.|+++..+....+.++ ++||+...++++..
T Consensus 281 ~--~~---~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~~~l~~~--~~~~~~~~~~~~~~ 350 (365)
T PRK09188 281 P--AD---EKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQIDELDDL--LREPEIRGLVEAIA 350 (365)
T ss_pred C--CC---HHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhccccccccc--ccChhHHHHHHHHH
Confidence 2 23 56899999999999 999999999999999999999999999998887777666 77777777776543
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.83 E-value=2.5e-18 Score=183.39 Aligned_cols=495 Identities=16% Similarity=0.149 Sum_probs=317.4
Q ss_pred cCCCCeeEEEEEcCCCCceeeecHHHHHHHHHHHHH-HHHHCCCCCCCEEEEEccCC--hHHHHHHHHHHHhCCEEEecC
Q 006776 65 AGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLAN-YLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 65 ~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~-~L~~~Gv~~gd~V~i~~~n~--~~~~v~~lA~~~~G~v~v~l~ 141 (631)
++.+.+.|.|+-++. +....+||..+..++.++|+ .|.+.|+.++|+|.++...+ .++++..++|...|.+.+|++
T Consensus 105 nhs~~~ta~i~id~k-gk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~ 183 (1363)
T KOG3628|consen 105 NHSATSTAHICIDKK-GKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLS 183 (1363)
T ss_pred cCCCCCceEEEEcCC-CceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccch
Confidence 378899999988877 44889999999999999999 77788999999999999755 899999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHHHHHhhhcCCCccEEEEEecCCccccccCcCCCCCccch
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWW 221 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 221 (631)
+..+.+++...++....+++++++...+.............+++... ..+.
T Consensus 184 e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~---------------------------t~~~-- 234 (1363)
T KOG3628|consen 184 ELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWK---------------------------TNDF-- 234 (1363)
T ss_pred hhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhh---------------------------cccc--
Confidence 99999999999999999999998765432111110000011111000 0000
Q ss_pred hhhcccCCCCCCceecCCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHH--------------HH-----HHhcCCCCC
Q 006776 222 QDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--------------TF-----KYAFDYKPS 282 (631)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~--------------~~-----~~~~~~~~~ 282 (631)
...........+.... . ..+|-||++++|.--|++.+|+ ++.+... .. ...++....
T Consensus 235 k~~~~~~k~~~P~~~~--~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~ 310 (1363)
T KOG3628|consen 235 KGNYTKDKIKKPRMQL--P-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSE 310 (1363)
T ss_pred cceeehhhccCCceee--e-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcc
Confidence 0000001111222222 3 8899999999999999999998 3332211 11 122344556
Q ss_pred cEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhc-CCc-------
Q 006776 283 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD-GNE------- 354 (631)
Q Consensus 283 d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~-~~~------- 354 (631)
+.++....+....|++++++.++++|.+.+.++..-. ..+..+.+++.+++.+++.+--..+...... .+.
T Consensus 311 ~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l-~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~ 389 (1363)
T KOG3628|consen 311 DVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVL-KPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSF 389 (1363)
T ss_pred cceeeccCcccccchhhhhhhhhhcCceeecCchhhc-CCCcchhhhhccceeEEEeecccccCcccccccCCcccccch
Confidence 7777777777788888889999999999999876433 3678899999999999988764444433221 111
Q ss_pred -cccccCCCceeEEEEccCCCCHhHHHHHHHH----hCCCCcce---------------ecccccccccceecccCCCC-
Q 006776 355 -YVTRYSRKSLRVLGSVGEPINPSAWRWFFNV----VGDSRCPI---------------SDTWWQTETGGFMITPLPGA- 413 (631)
Q Consensus 355 -~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~----~~~~~~~i---------------~~~yg~tE~g~~~~~~~~~~- 413 (631)
..+..+++++|.+++....++.+..+..... +|..+.++ +..=+++|.+..... .++.
T Consensus 390 ~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r-~p~~~ 468 (1363)
T KOG3628|consen 390 KKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIR-RPEQM 468 (1363)
T ss_pred hhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhccccc-Ccccc
Confidence 1123478999999999999998865433322 23211111 111122444433221 1110
Q ss_pred ----------------------------CCCCCCCcCCCcCC-CceEEeCC-CCcccCCCcceeEEEecCCCcccccccC
Q 006776 414 ----------------------------WPQKPGSATFPFFG-VQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYG 463 (631)
Q Consensus 414 ----------------------------~~~~~~~~G~p~~~-~~~~i~d~-~g~~~~~g~~Gel~v~~~~p~~~~gy~~ 463 (631)
.......+|+-.|| +.+.++++ ..+.|..++.|||||.+ +....+||.
T Consensus 469 ~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS--~~~~~~~~a 546 (1363)
T KOG3628|consen 469 ADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSS--NSLGKLFYA 546 (1363)
T ss_pred cccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEec--CCcccceee
Confidence 00223345666665 55666776 55678899999999999 999999997
Q ss_pred Cchhhhhhccc-------cCCC---eEecCceEEEccCCeEEEEeecCCeEecCceeechHHH----------HHHHhcC
Q 006776 464 DHERYETTYFK-------PFPG---YYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEV----------ESALVSH 523 (631)
Q Consensus 464 ~~~~~~~~~~~-------~~~g---~~~TGDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eI----------E~~l~~~ 523 (631)
-+..+...|.. ..++ +.|||-+|++.+++-+++.++.|....+.|.+.+..+| +.+.+..
T Consensus 547 l~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v 626 (1363)
T KOG3628|consen 547 LDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGV 626 (1363)
T ss_pred ccccccceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhcc
Confidence 55433333211 1122 89999999997666555555666666677888776554 3334445
Q ss_pred cccceEEEEeeecCCCCeeEEEEEEeCCCCCCcH--HHHHHHHHHHHhh--cCCCccCceEEECCCCCCCCCchhhHHHH
Q 006776 524 PQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSE--ELRKSLVLAVRKQ--IGAFAAPDKIHWAPGLPKTRSGKIMRRIL 599 (631)
Q Consensus 524 ~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~i~~~~~~~--l~~~~~p~~i~~v~~lP~t~sGKi~r~~l 599 (631)
+.|-++.++- +|..++.++-.+.....+ +...++.+.+... ++.|.+ .++.-+.||||+-|-|.-..+
T Consensus 627 ~~VF~~saf~------~E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCi--livP~~tLPrt~~~Gi~~~~~ 698 (1363)
T KOG3628|consen 627 IAVFDVSAFE------DEHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCI--LIVPANTLPRTPLGGIHNNEC 698 (1363)
T ss_pred ceEEEEeeee------cceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEE--EEeccccCCCccccccccHHH
Confidence 6677777762 555555555444432111 1223344433332 222211 244456999999888999999
Q ss_pred HHHHhc
Q 006776 600 RKIASR 605 (631)
Q Consensus 600 ~~~~~~ 605 (631)
|+.|.+
T Consensus 699 k~~F~~ 704 (1363)
T KOG3628|consen 699 KQAFLE 704 (1363)
T ss_pred HHHHHc
Confidence 999875
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.78 E-value=3.4e-17 Score=169.21 Aligned_cols=246 Identities=16% Similarity=0.120 Sum_probs=161.2
Q ss_pred CCeEEEeCCCCCCCCceEEEcCchHHHHHHHHHHHh--cCCCCCcEEEEecccceecchhHHHHHhhhcCce-EEEecCC
Q 006776 241 DPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA--FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGAS-VVVFEGA 317 (631)
Q Consensus 241 ~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~-~vl~~~~ 317 (631)
.-..+..||||||.|-.++.+......+.+...... .++..++++.... |..+. ++..+..... +-.++-
T Consensus 100 ~~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~~---ly~~~~~~~~~~~~~~l- 172 (430)
T TIGR02304 100 GNISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADNN---LYQSVNNRWISLDFFDL- 172 (430)
T ss_pred CcEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccChh---HHHHHHhccceeeecCC-
Confidence 345677899999999999999886544433322221 2556666654432 22222 2332222211 222321
Q ss_pred CCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccc
Q 006776 318 PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTW 397 (631)
Q Consensus 318 ~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~y 397 (631)
..+.+.+++.|++++|+++.+.|+.+..|.+...+. ..+ ..++.++++||.++++..+.+.+.|| +++++.|
T Consensus 173 --~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~--~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg---~~V~~~Y 244 (430)
T TIGR02304 173 --LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEG--ELT-IKPKKVISVAEVLEPQDRELIRNVFK---NTVHQIY 244 (430)
T ss_pred --CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhc--CCC-CCceEEEEccCCCCHHHHHHHHHHhC---CCeeEcc
Confidence 136888999999999999999999999999864321 112 47899999999999999999999998 8899999
Q ss_pred ccccccceecccCCCCCCCCCCCcCCCcCCCceE--EeCCCCcccCCCcceeEEEecCCCcccccccCCchhhhhhcccc
Q 006776 398 WQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV--IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP 475 (631)
Q Consensus 398 g~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~--i~d~~g~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~ 475 (631)
|+|| |.+...+..+. .+.. -..+-++ ++|++++ +..+||+ +.+. ...+.+
T Consensus 245 G~tE-g~la~eC~~g~--lHl~-----ed~~~vE~~ivD~~~~-------~~~ViT~--------L~n~----~~PlIR- 296 (430)
T TIGR02304 245 QATE-GFLASTCRCGT--LHLN-----EDLVHIEKQYLDEHKR-------FVPIITD--------FTRT----TQPIVR- 296 (430)
T ss_pred CCch-hheEEecCCCC--EEEc-----cccEEEEeeEECCCCc-------eEEEEec--------CCCc----cceEEe-
Confidence 9999 54333222111 1111 1223344 7887653 3447776 2221 122333
Q ss_pred CCCeEecCceEEEccC----Ce----E-EEEeecCCeEec---Ccee--echHHHHHHHh-cCcccceEEEEe
Q 006776 476 FPGYYFTGDGCSRDKD----GY----H-WLTGRVDDVINV---SGHR--IGTAEVESALV-SHPQCAEAAVVG 533 (631)
Q Consensus 476 ~~g~~~TGDl~~~~~d----G~----l-~i~GR~dd~i~~---~G~~--i~~~eIE~~l~-~~~~V~~~~vv~ 533 (631)
|+|||++...++ |. + .|.||.||++++ +|.. ++|..++.++. ..++|.+..++.
T Consensus 297 ----YrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q 365 (430)
T TIGR02304 297 ----YRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQ 365 (430)
T ss_pred ----eeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEE
Confidence 999999887543 32 3 488999999985 3544 59999998855 578999988873
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.37 E-value=1.3e-12 Score=100.56 Aligned_cols=70 Identities=40% Similarity=0.566 Sum_probs=61.2
Q ss_pred HHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCc--eEEECCC-CCCCCC
Q 006776 515 EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPD--KIHWAPG-LPKTRS 591 (631)
Q Consensus 515 eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~--~i~~v~~-lP~t~s 591 (631)
|||++|.+||+|.+|+|++++++..|+.+++||++ ..++|+++++++|++|++|+ .++.+++ ||+|+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~---------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~ 71 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL---------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPS 71 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE---------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETT
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe---------eecccccchhhhCCCcceeeEEEEccccCcCCCCCC
Confidence 79999999999999999999999899999999998 24899999999999999994 4555576 999999
Q ss_pred ch
Q 006776 592 GK 593 (631)
Q Consensus 592 GK 593 (631)
||
T Consensus 72 GK 73 (73)
T PF13193_consen 72 GK 73 (73)
T ss_dssp SS
T ss_pred CC
Confidence 98
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.02 E-value=3.3e-08 Score=100.37 Aligned_cols=235 Identities=16% Similarity=0.129 Sum_probs=134.5
Q ss_pred cCCCCCeEEEeCCCCCCCCceEEEcCchHHHHH---HHHHHHhcCCCCC-cEEEEecccceecchh----HHHHHhhhcC
Q 006776 237 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT---ATTFKYAFDYKPS-DVYWCTADCGWITGHS----YVTYGPMLNG 308 (631)
Q Consensus 237 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~---~~~~~~~~~~~~~-d~~~~~~~~~~~~g~~----~~~~~~l~~G 308 (631)
.+.+++..++.||||||.|--+.+.+.....+. ...+....+.... -.++...|-......+ ......+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 456678889999999999866666554422221 1122211222211 1222222322111111 1122233444
Q ss_pred ceEEEecCCCCCCChhHHHHHHH----HhCCcEEeecHHHHHHHHhcCCccccccCCC-ceeEEEEcc------CCCC-H
Q 006776 309 ASVVVFEGAPTYPDSGRSWDIVD----KYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK-SLRVLGSVG------EPIN-P 376 (631)
Q Consensus 309 ~~~vl~~~~~~~~~~~~~~~~i~----~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~-~lr~v~~~G------e~l~-~ 376 (631)
..-.+ .+. ..+.+.+++.+. +.++..+++.|.++..++....+......|+ ..+.+-.|| +.++ +
T Consensus 166 ~~~~l-~~~--~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ 242 (365)
T PF04443_consen 166 SRFAL-DND--ELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSRE 242 (365)
T ss_pred ceeee-cCC--ccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHH
Confidence 44333 221 236666666554 4567788888887777665443333334554 345555555 4465 4
Q ss_pred hHHHHHHHHhCC-CCcceecccccccccceecccCCCCCCCCCCCcCCCcCCCceEEeCC-CCcccCCCcceeEEEecCC
Q 006776 377 SAWRWFFNVVGD-SRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSW 454 (631)
Q Consensus 377 ~~~~~~~~~~~~-~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~g~~~~~g~~Gel~v~~~~ 454 (631)
+..+.+.+.||. ..-.+++.|||||.....+....+. .+.|-. +.|.|+ +.++++.|+.|-|.+-.+.
T Consensus 243 ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~---------~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~ 312 (365)
T PF04443_consen 243 EFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH---------FHVPPW-VIIRDPETLEPLPPGETGLIQVIDLA 312 (365)
T ss_pred HHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCCc---------ccCCCe-EEEECCCCCcCCCCCCeeEEEEEccc
Confidence 566777788884 3347999999999876544331111 122323 667787 6789999999999997732
Q ss_pred CcccccccCCchhhhhhccccCCCeEecCceEEEccC--------CeEEEEeecCC
Q 006776 455 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKD--------GYHWLTGRVDD 502 (631)
Q Consensus 455 p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~d--------G~l~i~GR~dd 502 (631)
+.- .+|...|.|+|.+..+ .++.++||.+.
T Consensus 313 ~~s------------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 313 NTS------------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred ccC------------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 211 2455779999988654 27999999874
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.66 E-value=4.5e-07 Score=97.59 Aligned_cols=163 Identities=19% Similarity=0.147 Sum_probs=94.3
Q ss_pred CCceeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCCcCC---CceEEeCCC-
Q 006776 361 RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFG---VQPVIVDEK- 436 (631)
Q Consensus 361 l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p~~~---~~~~i~d~~- 436 (631)
++.|+.|.+.+..-...-...+++.+|. -..+...|++||.- +.+ +.. +... .+..+++ ++..-+++.
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~-~~~~~~~y~ASEg~-i~i-~~~---~~~~--~~~l~~~~~ffEFip~~~~~ 337 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGG-VPIQSKGYGASEGF-IGI-PLD---PEDP--GYVLAPDSGFFEFIPVDEDE 337 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTT-S-EEE-EEEETTEE-EEE-ES----CCC----EEE-TTSSEEEEEE-STT-
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCC-CceeeccccccceE-EEE-ecC---CCCC--ceEeecCCeEEEEEeccCCc
Confidence 6899977776666556667888899985 34466889999953 222 221 0111 1112222 222223322
Q ss_pred ------Cc-----ccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEcc--CC--eEEEEeecC
Q 006776 437 ------GV-----EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDK--DG--YHWLTGRVD 501 (631)
Q Consensus 437 ------g~-----~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~--dG--~l~i~GR~d 501 (631)
++ .+..|+.-||+++. . .|+| -|+.||++++.. ++ .+.|+||.+
T Consensus 338 ~~~~~~~~~l~~~ele~G~~YelviTt--~---~GLy----------------RY~iGDvVrv~gf~~~~P~i~F~~R~~ 396 (528)
T PF03321_consen 338 QNPSEQPKTLLLHELEVGEEYELVITT--N---SGLY----------------RYRIGDVVRVTGFYNQTPRIEFVGRRG 396 (528)
T ss_dssp ------SSSEEGGG--TT-EEEEEEES--T---TS-S----------------SEEECEEEEEEEEETTEEEEEEEEETT
T ss_pred ccccCCCceecHHHhcCCCeEEEEEec--c---ccee----------------eeecCCEEEEeeccCCCcEEEEeccCC
Confidence 22 35578889999988 1 1222 299999999854 34 799999999
Q ss_pred CeEecCceeechHHHHHHHhcC-----cccceEEEEeeecCCCCeeEEEEEEeCCC
Q 006776 502 DVINVSGHRIGTAEVESALVSH-----PQCAEAAVVGVEHEVKGQGIYAFVTLVEG 552 (631)
Q Consensus 502 d~i~~~G~~i~~~eIE~~l~~~-----~~V~~~~vv~~~~~~~~~~~~~~v~~~~~ 552 (631)
.++++.|++++-.+|+++|.+. -.+.+..+............+.++.+...
T Consensus 397 ~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 397 QVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp EEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred ceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 9999999999999999999864 34567766655322333456677776654
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.12 E-value=0.00076 Score=73.08 Aligned_cols=133 Identities=16% Similarity=0.126 Sum_probs=81.0
Q ss_pred CCc---eeEEEEccCCCCHhHHHHHHHHhCCCCcceecccccccccceecccCCCCCCCCCCCcCCC-cC-CCceEEe--
Q 006776 361 RKS---LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFP-FF-GVQPVIV-- 433 (631)
Q Consensus 361 l~~---lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p-~~-~~~~~i~-- 433 (631)
++. +..+..||.. .-...++..+|. -..+...|++||.-. .+ +.... ..+...+.. ++ +.-.+-+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~-~~~~~~~Y~ASEg~~-gi-~~~~~--~~p~~~~~~l~~~~~ffEFiP~ 372 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGG-LPMASTIYASSESYF-GI-NLNPM--CKPSEVSYTIMPNMAYFEFLPH 372 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCC-CccccccccccceEE-Ee-ecCCC--CCCCCcceEecCCcEEEEeeec
Confidence 466 5555666644 444556666663 245788999999542 22 21100 011111111 01 2222333
Q ss_pred CCCC------------cccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEcc----CCeEEEE
Q 006776 434 DEKG------------VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDK----DGYHWLT 497 (631)
Q Consensus 434 d~~g------------~~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~----dG~l~i~ 497 (631)
++.| ..+..|+.-+|+|+. ..|.| -|+.||.+++.. --.+.|+
T Consensus 373 ~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT-----~~GLy----------------RY~iGDvVrvtgf~~~~P~i~F~ 431 (597)
T PLN02249 373 NHDGDGALDETSLVELADVEVGKEYELVITT-----YAGLY----------------RYRVGDILRVTGFHNSAPQFKFI 431 (597)
T ss_pred ccCCcccCCCCcEecHHHcCCCCeEEEEEEc-----cccee----------------EeecCCEEEEeeccCCCcEEEEE
Confidence 2221 124568888999987 11111 299999999864 2468999
Q ss_pred eecCCeEecCceeechHHHHHHHhc
Q 006776 498 GRVDDVINVSGHRIGTAEVESALVS 522 (631)
Q Consensus 498 GR~dd~i~~~G~~i~~~eIE~~l~~ 522 (631)
||.+.++++.|+++.-.+++.+|.+
T Consensus 432 gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 432 RRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred ccCCcceecccccCCHHHHHHHHHH
Confidence 9999999999999999999998876
No 136
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=98.00 E-value=4.6e-05 Score=61.74 Aligned_cols=85 Identities=21% Similarity=0.336 Sum_probs=58.0
Q ss_pred ceeechHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCC----cHHHHHHHHHHHHhhcCCCccCceEEEC
Q 006776 508 GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY----SEELRKSLVLAVRKQIGAFAAPDKIHWA 583 (631)
Q Consensus 508 G~~i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~i~~~~~~~l~~~~~p~~i~~v 583 (631)
|.+|+|.+||++|.++|++.....+.+......+.+.+.|.+.++... .+++.++|.+.+++.++- .| .|.++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv--~~-~V~lv 77 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV--RP-EVELV 77 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc--eE-EEEEE
Confidence 789999999999999999994444445544466778888888886532 256788899999999862 23 45555
Q ss_pred --CCCCCCCCchhhH
Q 006776 584 --PGLPKTRSGKIMR 596 (631)
Q Consensus 584 --~~lP~t~sGKi~r 596 (631)
.+||++ .||..|
T Consensus 78 ~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 78 PPGTLPRS-EGKAKR 91 (96)
T ss_dssp -TT-S----SSSS-S
T ss_pred CCCCccCC-CCcceE
Confidence 489998 678655
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.90 E-value=0.00069 Score=72.76 Aligned_cols=61 Identities=15% Similarity=0.186 Sum_probs=49.8
Q ss_pred cCCCcceeEEEecCCCcccccccCCchhhhhhccccCCC--eEecCceEEEc----cCCeEEEEeecCCeEecCceeech
Q 006776 440 IEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRD----KDGYHWLTGRVDDVINVSGHRIGT 513 (631)
Q Consensus 440 ~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g--~~~TGDl~~~~----~dG~l~i~GR~dd~i~~~G~~i~~ 513 (631)
+..|+.-||+|+. +.| .|+.||+.++. .--.+.|++|.+.++.+.|++.+-
T Consensus 398 vk~G~~YelVvTt-----------------------~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE 454 (606)
T PLN02247 398 VKVGHYYELVVTT-----------------------FTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNE 454 (606)
T ss_pred ccCCCeEEEEEEe-----------------------cCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCH
Confidence 4567888999887 133 39999999874 345799999999999999999999
Q ss_pred HHHHHHHhcC
Q 006776 514 AEVESALVSH 523 (631)
Q Consensus 514 ~eIE~~l~~~ 523 (631)
.++..++.+.
T Consensus 455 ~~l~~Av~~a 464 (606)
T PLN02247 455 EDLLKAVTQA 464 (606)
T ss_pred HHHHHHHHHH
Confidence 9998888763
No 138
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.82 E-value=0.019 Score=61.81 Aligned_cols=135 Identities=12% Similarity=0.093 Sum_probs=81.8
Q ss_pred CCCceeEEEEccCCCCHhHHHHHHHHhCCCCcc-eecccccccccceecccCCCCCCCCCCCcCCC-cCCC---ceEEeC
Q 006776 360 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCP-ISDTWWQTETGGFMITPLPGAWPQKPGSATFP-FFGV---QPVIVD 434 (631)
Q Consensus 360 ~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~-i~~~yg~tE~g~~~~~~~~~~~~~~~~~~G~p-~~~~---~~~i~d 434 (631)
-+++++.|.+....-...-...++...| +++ +...|++||+-. .+...|. ..+..+..+ +|++ +.--++
T Consensus 302 LWP~lk~I~~~~tGsm~~Y~p~L~~y~g--glpl~~~~Y~ASE~~~-ginl~P~---~~p~~~sy~L~p~~~yFEFip~~ 375 (612)
T PLN02620 302 LWPNTKYVDVIVTGTMSQYIPTLDYYSN--GLPLVCTMYASSECYF-GVNLNPL---CKPSEVSYTLIPTMAYFEFLPVH 375 (612)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcC--CCccccccccccceEE-EeccCCC---CCcccceeeecCCcEEEEEeecc
Confidence 3577887776544444444455555555 465 455799999542 2211111 112222222 2322 211122
Q ss_pred C-C-----------------Cc-----ccCCCcceeEEEecCCCcccccccCCchhhhhhccccCCC--eEecCceEEEc
Q 006776 435 E-K-----------------GV-----EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRD 489 (631)
Q Consensus 435 ~-~-----------------g~-----~~~~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g--~~~TGDl~~~~ 489 (631)
+ + ++ .+..|+.-||+|+. +.| -|+.||+.++.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt-----------------------~~GLyRYrlGDvv~V~ 432 (612)
T PLN02620 376 RNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTT-----------------------YAGLYRYRVGDVLRVA 432 (612)
T ss_pred CcccccccccccccccccccCccccHHHccCCCeEEEEEEe-----------------------cCceEEEecCCEEEEe
Confidence 1 1 11 25567888999987 133 39999999875
Q ss_pred ----cCCeEEEEeecCCeEecCceeechHHHHHHHhcC
Q 006776 490 ----KDGYHWLTGRVDDVINVSGHRIGTAEVESALVSH 523 (631)
Q Consensus 490 ----~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l~~~ 523 (631)
..-.+.|++|.+-+..+.|++.+-.++..++.+.
T Consensus 433 Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 433 GFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred eecCCCceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 3457999999999999999999999998887653
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=93.95 E-value=0.28 Score=50.75 Aligned_cols=84 Identities=23% Similarity=0.172 Sum_probs=70.1
Q ss_pred eeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEE
Q 006776 84 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 161 (631)
Q Consensus 84 ~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 161 (631)
--+|+.+....+..+|+.|...|..+||+|.....-++ .-.-..+|+.++|+.++|++++. -+....++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEE
Confidence 35899999999999999999999999999998876221 12678889999999999999843 4556689999999999
Q ss_pred EEeCCcc
Q 006776 162 ITSNAVK 168 (631)
Q Consensus 162 i~~~~~~ 168 (631)
.+..++.
T Consensus 187 ~~tps~~ 193 (438)
T COG1541 187 AATPSYL 193 (438)
T ss_pred EEChHHH
Confidence 9887653
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=86.06 E-value=5.3 Score=42.60 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=61.2
Q ss_pred eeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH--HHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEE
Q 006776 84 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 161 (631)
Q Consensus 84 ~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~--~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 161 (631)
..+|..++...+...+..+...|+++||++.+..+.+.. ....++|+.++|+..++... .+.....+++.++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 457999999888888888888999999999999876543 23455788999998776543 2345678899999988
Q ss_pred EEeC
Q 006776 162 ITSN 165 (631)
Q Consensus 162 i~~~ 165 (631)
+...
T Consensus 181 ~~~p 184 (445)
T TIGR03335 181 VASV 184 (445)
T ss_pred EECH
Confidence 7654
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=84.37 E-value=4.9 Score=42.45 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=63.5
Q ss_pred eecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEE
Q 006776 85 TLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 162 (631)
Q Consensus 85 ~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii 162 (631)
.+|..++......++..+...|+++||++....+... ......+++.++|+..+++.+.. .+.+...|++.++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4677888777777778888889999999988765443 22334677889999988887754 57888999999999999
Q ss_pred EeCCc
Q 006776 163 TSNAV 167 (631)
Q Consensus 163 ~~~~~ 167 (631)
+....
T Consensus 173 ~~Ps~ 177 (422)
T TIGR02155 173 VTPSY 177 (422)
T ss_pred EcHHH
Confidence 87653
No 142
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=79.61 E-value=10 Score=36.18 Aligned_cols=54 Identities=20% Similarity=0.203 Sum_probs=44.7
Q ss_pred HHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCc
Q 006776 103 KDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKP 158 (631)
Q Consensus 103 ~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~ 158 (631)
...|+.++|++. .+|-.- -....+++++..|+..+.+ +.+.++++.+.+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 567899999999 998543 3445789999999998887 68999999999998775
No 143
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=71.49 E-value=39 Score=35.52 Aligned_cols=99 Identities=15% Similarity=0.093 Sum_probs=73.1
Q ss_pred CCCCeeEEEEEcCCC---CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEcc--CChHHHHHHHHHHHhCCEEEec
Q 006776 66 GLGDKVAIYWEANDP---GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLP--MLMELPIAMLACARIGAVHSVV 140 (631)
Q Consensus 66 ~~~~~~A~~~~~~~~---~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~--n~~~~~v~~lA~~~~G~v~v~l 140 (631)
..||+++.+...... -...++|-.++.+++..++.. .|+...+++++-.| .+.-.++..+|++..|+..+.-
T Consensus 231 ~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r---~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp 307 (596)
T KOG1177|consen 231 LSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGAR---AGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFP 307 (596)
T ss_pred cCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHH---hCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEee
Confidence 457777766443221 134679999998888876654 46666556555444 2234567789999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEeCCc
Q 006776 141 FAGFSSDSLAQRIMDCKPKVVITSNAV 167 (631)
Q Consensus 141 ~~~~~~~~l~~~l~~~~~~~ii~~~~~ 167 (631)
.|.+.+....+.+.+-+|..++.....
T Consensus 308 ~~~f~~k~alqai~~ekcT~l~gtPtM 334 (596)
T KOG1177|consen 308 APSFDPKDALQAISNEKCTTLYGTPTM 334 (596)
T ss_pred CCCCChHHHHHHHHhhceEEEecChHH
Confidence 999999999999999999999987653
No 144
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=70.51 E-value=15 Score=33.29 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=38.7
Q ss_pred chHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCC
Q 006776 512 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGA 573 (631)
Q Consensus 512 ~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~ 573 (631)
-...|++.+.+.++|.+|.|+.. ++.+.+.|.++......+++.++|.+.+++..+.
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~-----~~~a~Vav~~~~~~~~~~~i~~~V~~~v~~~~p~ 132 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVT-----DDNAYVAVDLDFNRFNTKKIKKKVEKAVKSADPR 132 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEE-----CCEEEEEEEecccccchhHHHHHHHHHHHHhCCC
Confidence 35678899999999999999964 3334444555532334466677777777776554
No 145
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=69.45 E-value=48 Score=35.75 Aligned_cols=96 Identities=23% Similarity=0.196 Sum_probs=68.1
Q ss_pred CCCeeEEEEEcCCC-C--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEANDP-G--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++...... + ....+|+..+...+..+. ...+++++|++...+|..- .+...+++++..|+..++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWA---EYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---HhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 44677776543321 1 234689988876555443 3457899999998887543 3345678999999887764
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+.++.+...+++.++.++++...
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~ 264 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPT 264 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHH
Confidence 5688999999999999999887654
No 146
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=69.08 E-value=1.5e+02 Score=30.81 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=41.5
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|++..|.-......+-.....+.+-+........+.+...++. ++++|+.+......+...++..+
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I 158 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKI 158 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHH
Confidence 5789988766665443333333334454444444334466777777653 57888876655555566665443
No 147
>PRK08315 AMP-binding domain protein; Validated
Probab=68.69 E-value=53 Score=35.99 Aligned_cols=96 Identities=18% Similarity=0.207 Sum_probs=67.2
Q ss_pred CCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccC--ChHHHHHHHHHHHhCCEEEecCC
Q 006776 68 GDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM--LMELPIAMLACARIGAVHSVVFA 142 (631)
Q Consensus 68 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n--~~~~~v~~lA~~~~G~v~v~l~~ 142 (631)
++.+|.+..... .+ ....+|...+...+..+.. ..+++++|++...+|. +..++..+++++..|+..+....
T Consensus 198 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~ 274 (559)
T PRK08315 198 PDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE 274 (559)
T ss_pred CCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecC
Confidence 455665544321 12 2346788877655554433 3588999999888875 34455667888999988876666
Q ss_pred CCCHHHHHHHHHhcCceEEEEeCC
Q 006776 143 GFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 143 ~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.+.+..+...+++.++.+++....
T Consensus 275 ~~~~~~~~~~l~~~~~t~~~~~P~ 298 (559)
T PRK08315 275 GFDPLATLAAVEEERCTALYGVPT 298 (559)
T ss_pred CCCHHHHHHHHHHcCCeEEecchH
Confidence 788899999999999999887654
No 148
>PLN02736 long-chain acyl-CoA synthetase
Probab=66.56 E-value=69 Score=36.04 Aligned_cols=120 Identities=12% Similarity=-0.064 Sum_probs=74.0
Q ss_pred CCCCCeEEEe--CCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEE
Q 006776 238 DAEDPLFLLY--TSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 313 (631)
Q Consensus 238 ~~~~~~~i~~--TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl 313 (631)
.++.+++..- ..|.+|.- ..+|.+.+..... .......|++++|++...++-..-. ...+++++..|+.++.
T Consensus 57 ~p~~~al~~~~~~~~~~~~~--~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vp 132 (651)
T PLN02736 57 FRDYKYLGTRIRVDGTVGEY--KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVP 132 (651)
T ss_pred CCCCCeEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEE
Confidence 3566665431 23333321 2346665333221 2222357899999987776655332 3456788889998887
Q ss_pred ecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccccCCCceeEEEEc
Q 006776 314 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 370 (631)
Q Consensus 314 ~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~~~l~~lr~v~~~ 370 (631)
.... ..++.+..++++.+++++++.+..+..+..... .++.++.++..
T Consensus 133 l~~~---~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~------~~~~l~~ii~~ 180 (651)
T PLN02736 133 LYDT---LGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS------EIPSVRLIVVV 180 (651)
T ss_pred eecC---CCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh------cCCCceEEEEE
Confidence 6543 378889999999999999999887766655321 23456665554
No 149
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=66.44 E-value=72 Score=34.40 Aligned_cols=96 Identities=13% Similarity=0.152 Sum_probs=67.8
Q ss_pred CCeeEEEEEcCCC-C--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh-HHHHHHHHHHHhCCEEEecCCC
Q 006776 68 GDKVAIYWEANDP-G--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFAG 143 (631)
Q Consensus 68 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~-~~~v~~lA~~~~G~v~v~l~~~ 143 (631)
++.+|++...... + ....+|+..+...+..... ..|++++|++...+|..- ......++++..|+..+..+.
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~- 241 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR- 241 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC-
Confidence 4567777554321 1 1346889888766655544 568899999998888543 223444568889988777665
Q ss_pred CCHHHHHHHHHhcCceEEEEeCCc
Q 006776 144 FSSDSLAQRIMDCKPKVVITSNAV 167 (631)
Q Consensus 144 ~~~~~l~~~l~~~~~~~ii~~~~~ 167 (631)
++.+.+...+++.++.++++....
T Consensus 242 ~~~~~~~~~l~~~~~t~l~~~p~~ 265 (521)
T PRK06187 242 FDPENLLDLIETERVTFFFAVPTI 265 (521)
T ss_pred CCHHHHHHHHHHhCCeEEEchHHH
Confidence 589999999999999999987643
No 150
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.31 E-value=73 Score=34.84 Aligned_cols=97 Identities=18% Similarity=0.227 Sum_probs=66.8
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccC--ChHHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM--LMELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n--~~~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|.+..... .+ ....+|+..+...+..+.. ..|++++|++...+|- ....+..+++++..|+..+...
T Consensus 199 ~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~ 275 (558)
T PRK12583 199 DRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAE---SLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPN 275 (558)
T ss_pred CCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHH---HhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeec
Confidence 3455665543321 11 2346888888655554433 3588999999888774 3455667788888998877555
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
..+.+..+...+++.++.+++....
T Consensus 276 ~~~~~~~~~~~i~~~~~t~l~~~P~ 300 (558)
T PRK12583 276 EAFDPLATLQAVEEERCTALYGVPT 300 (558)
T ss_pred CCCCHHHHHHHHHHcCCeEEeccHH
Confidence 5678889999999999999877653
No 151
>PLN03051 acyl-activating enzyme; Provisional
Probab=60.38 E-value=70 Score=34.55 Aligned_cols=96 Identities=13% Similarity=0.022 Sum_probs=64.7
Q ss_pred CCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh-HHHHHHHHHHHhCCEEEecCCC
Q 006776 68 GDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFAG 143 (631)
Q Consensus 68 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~-~~~v~~lA~~~~G~v~v~l~~~ 143 (631)
++.+|++..... .+ ....+|...+...+.. .....++.++|++...+|-+- .....+++++..|+..+.....
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASD---GWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHH---HHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 467776654332 11 2446788776544332 223468889999887777432 1234567888999988777655
Q ss_pred CCHHHHHHHHHhcCceEEEEeCC
Q 006776 144 FSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 144 ~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+..+.+...+++.++.++.....
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~ 217 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPS 217 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHH
Confidence 67788999999999999987664
No 152
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=59.39 E-value=1.1e+02 Score=33.31 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=67.4
Q ss_pred CCCeeEEEEEcCCC-C--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--hHHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEANDP-G--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~--~~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++...... + ....+|++.+...+... ....++.++|++..++|-. ..+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRAC---LKFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHH---HHhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 46788877654321 1 24568998887654433 3446788999998888743 223334567778888776665
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
..+.++.+...|++.++.++.....
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~ 282 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPV 282 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHH
Confidence 5678899999999999999987764
No 153
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=59.17 E-value=47 Score=29.48 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=30.6
Q ss_pred hHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhc
Q 006776 513 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQI 571 (631)
Q Consensus 513 ~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l 571 (631)
...|.+.+.+.|+|.+|.++.. |+..++.|.++.+.. ....++|++.+.+.+
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVt-----g~~A~Vgv~~~~~~~--~~~~~~iK~~Va~~V 107 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVIT-----GNYAYVGVDLTNGLE--GSVTDELKEKVAETV 107 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEE-----CCEEEEEEEcCCCcc--hhhHHHHHHHHHHHH
Confidence 3567888889999999999864 333444444444332 223444444444443
No 154
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=55.92 E-value=98 Score=32.46 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=64.8
Q ss_pred CCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC-hHHHHHHHHHHHhCCEEEecCCC
Q 006776 68 GDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML-MELPIAMLACARIGAVHSVVFAG 143 (631)
Q Consensus 68 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~-~~~~v~~lA~~~~G~v~v~l~~~ 143 (631)
++++|++..... .+ ....+|++.+...+...+.. .+++++|++...+|-. ...+..+++++..|+..+..++.
T Consensus 110 ~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~ 186 (436)
T TIGR01923 110 MDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF 186 (436)
T ss_pred cCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH
Confidence 456776644321 11 24478999988776666544 4899999999888753 23334567888999887776542
Q ss_pred CCHHHHHHHHHhcCceEEEEeCC
Q 006776 144 FSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 144 ~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+...+++.++.++.+...
T Consensus 187 ---~~~~~~l~~~~~t~~~~~P~ 206 (436)
T TIGR01923 187 ---NQLLEMIANERVTHISLVPT 206 (436)
T ss_pred ---HHHHHHHHHhCCeEEEeHHH
Confidence 48888999999999887653
No 155
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=55.63 E-value=88 Score=29.85 Aligned_cols=76 Identities=17% Similarity=0.104 Sum_probs=41.6
Q ss_pred CceEEEccCCeEEEEeecCCeEecCc-eeechH--HHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHH
Q 006776 483 GDGCSRDKDGYHWLTGRVDDVINVSG-HRIGTA--EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEEL 559 (631)
Q Consensus 483 GDl~~~~~dG~l~i~GR~dd~i~~~G-~~i~~~--eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~ 559 (631)
|.+.|.++||.+.|.|.. +...| ..++.. .++..+..++ .+.++++.++ + .....+-.++.......+
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~---~-k~~I~vFtDp~CpyCkkl 125 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQ---E-KHVITVFTDITCGYCHKL 125 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCC---C-CEEEEEEECCCChHHHHH
Confidence 457888899999998865 44443 223332 2333444555 3455554332 2 234555556666665555
Q ss_pred HHHHHHHH
Q 006776 560 RKSLVLAV 567 (631)
Q Consensus 560 ~~~i~~~~ 567 (631)
.+++.+..
T Consensus 126 ~~~l~~~~ 133 (232)
T PRK10877 126 HEQMKDYN 133 (232)
T ss_pred HHHHHHHh
Confidence 55555443
No 156
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=54.58 E-value=1e+02 Score=32.66 Aligned_cols=76 Identities=13% Similarity=0.228 Sum_probs=47.3
Q ss_pred HHHHCCCCCCCEEEEEccCChHHHHHH--HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHH
Q 006776 101 YLKDIGVKKGDAVIIYLPMLMELPIAM--LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 178 (631)
Q Consensus 101 ~L~~~Gv~~gd~V~i~~~n~~~~~v~~--lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~ 178 (631)
.|..+ +++||+|.+-. +.......+ ..+.+.|+.+..++.....+.+...|+. +.++|+.........+..++..
T Consensus 92 al~al-l~~GD~VI~~~-~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~ 168 (432)
T PRK06702 92 AVLNI-CSSGDHLLCSS-TVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKE 168 (432)
T ss_pred HHHHh-cCCCCEEEECC-CchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHH
Confidence 33444 68999877643 333322222 2357889999888887788888888865 6778887654333334445444
Q ss_pred H
Q 006776 179 I 179 (631)
Q Consensus 179 ~ 179 (631)
+
T Consensus 169 I 169 (432)
T PRK06702 169 F 169 (432)
T ss_pred H
Confidence 3
No 157
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=53.43 E-value=35 Score=29.49 Aligned_cols=42 Identities=14% Similarity=0.030 Sum_probs=34.1
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEccC---ChHHHHHHHHHHHhCCE
Q 006776 95 VCQLANYLKDIGVKKGDAVIIYLPM---LMELPIAMLACARIGAV 136 (631)
Q Consensus 95 v~~~A~~L~~~Gv~~gd~V~i~~~n---~~~~~v~~lA~~~~G~v 136 (631)
...++..|.++|+.+++.|.+|+.. +.....+++++-.+|.-
T Consensus 80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 3567888999999999999999975 56667777788888854
No 158
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=52.66 E-value=1.3e+02 Score=33.20 Aligned_cols=96 Identities=16% Similarity=0.039 Sum_probs=65.7
Q ss_pred CCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH--HHHHHHHHHHhCCEEEecCC
Q 006776 68 GDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVFA 142 (631)
Q Consensus 68 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~--~~v~~lA~~~~G~v~v~l~~ 142 (631)
++.+|++..... .+ ....+|.+.+...+. ......+++++|++...++.... ....+++.+..|+..+....
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~ 280 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQ---TGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG 280 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHH---HHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC
Confidence 456776654322 11 234678877755433 33344678899987766654422 24457788889998877777
Q ss_pred CCCHHHHHHHHHhcCceEEEEeCC
Q 006776 143 GFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 143 ~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.+.++.+...+++.++.++++...
T Consensus 281 ~~~~~~~~~~i~~~~~t~~~~~P~ 304 (570)
T PRK04319 281 RFSPERWYRILEDYKVTVWYTAPT 304 (570)
T ss_pred CCCHHHHHHHHHHcCCeEEEeCHH
Confidence 789999999999999999887654
No 159
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=52.00 E-value=1.1e+02 Score=31.81 Aligned_cols=72 Identities=17% Similarity=0.124 Sum_probs=45.4
Q ss_pred HHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC-----CCHHHHHHHHHhcCceEEEEeCCcccCCcccc
Q 006776 101 YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIH 175 (631)
Q Consensus 101 ~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 175 (631)
.+..+++++||.|.+-.+ .+.....++...|+.++.++.+ ...+.+...+.. +.++|+.... .+...+
T Consensus 62 ~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~~---~G~~~d 134 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVHY---AGVACD 134 (376)
T ss_pred HHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCC---CCCccC
Confidence 445568999999887544 3444556667889888777543 456777777654 6777764432 344455
Q ss_pred cHHH
Q 006776 176 LKDI 179 (631)
Q Consensus 176 ~~~~ 179 (631)
+.++
T Consensus 135 ~~~I 138 (376)
T TIGR02379 135 MDTI 138 (376)
T ss_pred HHHH
Confidence 5433
No 160
>PRK05939 hypothetical protein; Provisional
Probab=51.31 E-value=1e+02 Score=32.26 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=45.6
Q ss_pred HHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 100 NYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 100 ~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
..|..+ +++||.|.+.-+.-......+-++.+.|+.+..++. ...+.+...+. -+.++|++.......+...++..+
T Consensus 77 ~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-~d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I 153 (397)
T PRK05939 77 AVFLTL-LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-TDVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGI 153 (397)
T ss_pred HHHHHH-cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-CCHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHH
Confidence 344444 689999877543322333333456678988887766 35677887775 367888776544333444444333
No 161
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=51.11 E-value=91 Score=32.48 Aligned_cols=89 Identities=10% Similarity=-0.011 Sum_probs=60.2
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHH---HHHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEe
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 314 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~ 314 (631)
.+|.+|++. +.. -.+|...+... ++..+. ..++++++++....+-.- .....+++++..|+..+..
T Consensus 8 ~pd~~a~~~------~~~--~~~Ty~~l~~~v~~la~~L~-~~g~~~~~~V~i~~~n~~--~~~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 8 YPDRIALID------DEG--RSLTYKQLYERVRKLAAALR-KLGVKKGDRVAILLPNSI--EFVVAFLACLRAGAIPVPL 76 (417)
T ss_dssp STTSEEEEE------TTT--EEEEHHHHHHHHHHHHHHHH-HTTSSTTSEEEEEESSSH--HHHHHHHHHHHTT-EEEEE
T ss_pred CCCceEEEE------CCC--EEEEHHHHHHHHHHHhhHHH-HhCCCccccccccCCccc--eeeeeeccccccccccccc
Confidence 467777766 112 34566654332 233333 568899998877766542 3346678889999999998
Q ss_pred cCCCCCCChhHHHHHHHHhCCcEEee
Q 006776 315 EGAPTYPDSGRSWDIVDKYKVTIFYT 340 (631)
Q Consensus 315 ~~~~~~~~~~~~~~~i~~~~vt~l~~ 340 (631)
+.. ...+.+..++++.+++++++
T Consensus 77 ~~~---~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPS---LSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETT---SSHHHHHHHHHHHTESEEEE
T ss_pred ccc---cccccccccccccceeEEEE
Confidence 653 36788999999999999996
No 162
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=51.07 E-value=1.1e+02 Score=31.81 Aligned_cols=71 Identities=15% Similarity=0.291 Sum_probs=44.4
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|++..+........+-.+.+.|+.+..+++ ..+.+...++..+.++|++.......+...++..+
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~--d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I 159 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYP--STEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEV 159 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECC--CHHHHHHhcCccCceEEEEECCCCCCCEecCHHHH
Confidence 678999887766554443333233556776655554 36778777765577888876555445556665543
No 163
>PRK06164 acyl-CoA synthetase; Validated
Probab=50.96 E-value=1.5e+02 Score=32.26 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=68.2
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC-hHHHHHHHHHHHhCCEEEecCC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML-MELPIAMLACARIGAVHSVVFA 142 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~-~~~~v~~lA~~~~G~v~v~l~~ 142 (631)
.++.++++..... .+ ....+|...|...+..++..+ ++.++|++..++|.+ ...+..+++++..|+..+.. +
T Consensus 179 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 179 DPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 3567787765332 11 234678888876666555444 788999999999854 33445677888888887655 5
Q ss_pred CCCHHHHHHHHHhcCceEEEEeCC
Q 006776 143 GFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 143 ~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.+....+...|++.++.+++....
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~ 278 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDE 278 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHH
Confidence 678889999999999999886653
No 164
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=50.83 E-value=1.8e+02 Score=29.99 Aligned_cols=97 Identities=18% Similarity=0.167 Sum_probs=69.2
Q ss_pred CCeeEEEEEcCCC-C--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh-HHHHHHHHHHHhCCEEEecCCC
Q 006776 68 GDKVAIYWEANDP-G--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFAG 143 (631)
Q Consensus 68 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~-~~~v~~lA~~~~G~v~v~l~~~ 143 (631)
++.++++...... + ....+|++.+...+..+.. ..+++++|++....|.+. ..+..+++++..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 5677777543321 1 2456788888766666554 457789999999887553 3556678888888887777665
Q ss_pred CC--HHHHHHHHHhcCceEEEEeCCc
Q 006776 144 FS--SDSLAQRIMDCKPKVVITSNAV 167 (631)
Q Consensus 144 ~~--~~~l~~~l~~~~~~~ii~~~~~ 167 (631)
.. .+.+...+++.++..+++....
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~ 221 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSL 221 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHH
Confidence 54 7889999999999999887653
No 165
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=50.35 E-value=1.1e+02 Score=33.06 Aligned_cols=81 Identities=11% Similarity=0.139 Sum_probs=61.9
Q ss_pred eeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH-HHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEE
Q 006776 83 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 161 (631)
Q Consensus 83 ~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~-~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 161 (631)
...+|...+...+..+... .++++||++...+|.+-. .+..+++++..|+..+.. +.+.++.+...+++.++.++
T Consensus 178 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 178 GVVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGL 253 (515)
T ss_pred eEEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceE
Confidence 4568888887766655543 467899999999985532 345677889999988755 45789999999999999999
Q ss_pred EEeCCc
Q 006776 162 ITSNAV 167 (631)
Q Consensus 162 i~~~~~ 167 (631)
.+....
T Consensus 254 ~~~P~~ 259 (515)
T TIGR03098 254 AAVPPL 259 (515)
T ss_pred ecChHH
Confidence 877643
No 166
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=49.86 E-value=1.6e+02 Score=31.73 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=68.5
Q ss_pred CCCeeEEEEEcCCC-C--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH--HHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEANDP-G--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~--~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++...... + ....+|++.+...+... .....+++++|++...+|.... +...+++++..|+..+..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELY--ARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHH--hHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 35677776543321 1 24567888876654332 2244589999999888876543 3345677788998888777
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.....+.+...|++.++.++++...
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~ 261 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPT 261 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchH
Confidence 7778899999999999999988764
No 167
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=49.77 E-value=1.5e+02 Score=31.57 Aligned_cols=96 Identities=13% Similarity=0.148 Sum_probs=65.5
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh-HHHHHHHHHHHhCCEEEecCC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFA 142 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~-~~~v~~lA~~~~G~v~v~l~~ 142 (631)
.++++|++..... .+ ....+|++.+...+... ....|++++|++...+|-.- ..+..+++.+..|+..+..+
T Consensus 139 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 214 (483)
T PRK03640 139 DLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE- 214 (483)
T ss_pred CCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-
Confidence 3467776654321 11 13468888776544332 23468999999999988532 22344677778898876654
Q ss_pred CCCHHHHHHHHHhcCceEEEEeCC
Q 006776 143 GFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 143 ~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
..+...+...+++.++.++.....
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~ 238 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVST 238 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHH
Confidence 578999999999999999988764
No 168
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=49.25 E-value=1.8e+02 Score=33.20 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=65.1
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--hHHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~--~~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++..... .+ ....+|+..+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+...
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 4567777654332 11 2457898888766655443 34789999999988853 344456788888999877665
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
..+....+...+++.++.++....
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p 463 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTS 463 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchH
Confidence 445566777888888888876544
No 169
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=48.16 E-value=1.8e+02 Score=31.88 Aligned_cols=97 Identities=21% Similarity=0.244 Sum_probs=66.2
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC-hHHHHHHHHHHHhCCEEEecCC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML-MELPIAMLACARIGAVHSVVFA 142 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~-~~~~v~~lA~~~~G~v~v~l~~ 142 (631)
.++++|++..... .+ ....+|...+...+... ....++.++|++..++|-. ...+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHH---HhhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4577777654332 11 23467888776544433 2346889999998888743 22334567778888876655 5
Q ss_pred CCCHHHHHHHHHhcCceEEEEeCCc
Q 006776 143 GFSSDSLAQRIMDCKPKVVITSNAV 167 (631)
Q Consensus 143 ~~~~~~l~~~l~~~~~~~ii~~~~~ 167 (631)
.+.+..+...+++.++.++.+....
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~ 270 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAM 270 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHH
Confidence 6889999999999999999887653
No 170
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=46.81 E-value=80 Score=32.67 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=41.3
Q ss_pred HHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC-----CCHHHHHHHHHhcCceEEEEeC
Q 006776 101 YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 101 ~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
.+..+++++||.|.+-.+..+ ....++...|+.++.++.+ ...+.+...+.. +.++|+...
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~ 127 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVH 127 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeC
Confidence 334457899999877655443 4455677889887777532 457888887765 677777553
No 171
>PRK08308 acyl-CoA synthetase; Validated
Probab=46.65 E-value=2.4e+02 Score=29.41 Aligned_cols=96 Identities=8% Similarity=0.149 Sum_probs=66.7
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.++++..... .+ ....+|++.+...+..+.. ..++..+|++...+|..- .++..+++++..|+..+...
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 4567776654332 11 2456899988766655443 456788999888887653 34556788899998877664
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
...++.+...+++.++.+++....
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~ 199 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPL 199 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHH
Confidence 467888889999999998876653
No 172
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=46.07 E-value=82 Score=32.44 Aligned_cols=66 Identities=21% Similarity=0.221 Sum_probs=50.9
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC-----CCCHHHHHHHHHhcCceEEEEeC
Q 006776 96 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA-----GFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 96 ~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~-----~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
..+.-.|+.+|+++||-|.+ .+.-|+...=+++..|+.+|.++- ..+++.+...|... .|.|+...
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVh 130 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVH 130 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEeh
Confidence 45556788889999994433 366788888899999999998864 36789999998875 77777654
No 173
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=45.51 E-value=1.8e+02 Score=30.19 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=42.4
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCE-EEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAV-HSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v-~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||+|++..+.-......+......+++ ...++ ....+.+...+.. +.++|+.+......+...++..+
T Consensus 88 ~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I 159 (386)
T PRK08045 88 LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKI 159 (386)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHH
Confidence 578999887766554334333444444553 33343 3567778777754 67888877655555555665443
No 174
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=45.47 E-value=2.1e+02 Score=31.70 Aligned_cols=95 Identities=14% Similarity=0.196 Sum_probs=63.5
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH--HHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~--~~v~~lA~~~~G~v~v~l~ 141 (631)
.++++|++..... .+ ....+|...+...+..+... .+++++|++...+|-.-. ++..+++++..|+..+ +.
T Consensus 197 ~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v-~~ 272 (600)
T PRK08279 197 TAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLA-LR 272 (600)
T ss_pred CccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEE-Ec
Confidence 3466776654332 11 24568888887766655443 678899999998875432 3334556666666655 45
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+.+..+.+...+++.++.++....
T Consensus 273 ~~~~~~~~~~~i~~~~~t~~~~~p 296 (600)
T PRK08279 273 RKFSASRFWDDVRRYRATAFQYIG 296 (600)
T ss_pred CCCCHHHHHHHHHHhcceEEeehH
Confidence 668888999999999998886543
No 175
>PRK08316 acyl-CoA synthetase; Validated
Probab=45.31 E-value=2.3e+02 Score=30.45 Aligned_cols=95 Identities=14% Similarity=0.156 Sum_probs=65.4
Q ss_pred CCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecCC
Q 006776 68 GDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFA 142 (631)
Q Consensus 68 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~~ 142 (631)
++.+|.+..... .+ ....+|+..+... ++......+++++|++...+|-.- .+...+++++..|+..++..
T Consensus 170 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~- 245 (523)
T PRK08316 170 DDDLAQILYTSGTESLPKGAMLTHRALIAE---YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD- 245 (523)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHH---HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-
Confidence 355666544321 11 2456888887554 334455668999999999887543 23344667788898887764
Q ss_pred CCCHHHHHHHHHhcCceEEEEeCC
Q 006776 143 GFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 143 ~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
....+.+...+++.++.++++...
T Consensus 246 ~~~~~~~~~~i~~~~~t~~~~~P~ 269 (523)
T PRK08316 246 APDPELILRTIEAERITSFFAPPT 269 (523)
T ss_pred CCCHHHHHHHHHHhCCeEEEeCHH
Confidence 467899999999999999887654
No 176
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=44.38 E-value=58 Score=33.54 Aligned_cols=66 Identities=23% Similarity=0.297 Sum_probs=45.1
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC-----CCHHHHHHHHHhcCceEEEEeC
Q 006776 96 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 96 ~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
..+--.|..+|+++||.|++= ..-+....-|+...|+.++.++-+ ..++.+...+..- .++|+...
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~-t~ai~~~h 121 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPK-TKAILVVH 121 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTT-EEEEEEE-
T ss_pred HHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccC-ccEEEEec
Confidence 344556778999999988775 445566778899999999887643 5688888887754 36666654
No 177
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=43.63 E-value=99 Score=28.88 Aligned_cols=72 Identities=19% Similarity=0.107 Sum_probs=45.4
Q ss_pred chHHHHHHHhcCcccceEEEEeeecCC-----CCe--eEEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECC
Q 006776 512 GTAEVESALVSHPQCAEAAVVGVEHEV-----KGQ--GIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP 584 (631)
Q Consensus 512 ~~~eIE~~l~~~~~V~~~~vv~~~~~~-----~~~--~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~ 584 (631)
--.|+|+.|.++++|.+|-|.-.-.+. ..+ ..-+++.++++...+ +..+.|++.+....+ -..|..|.+++
T Consensus 116 le~eL~~tI~~i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~l~-~qv~~I~~LVa~sV~-gL~~enVtVvD 193 (206)
T PF01514_consen 116 LEGELERTIESIDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSELS-EQVQGIQNLVASSVP-GLKPENVTVVD 193 (206)
T ss_dssp HHHHHHHHHTTSTTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS--G-GGHHHHHHHHHHHST-T--GGGEEEEE
T ss_pred HHHHHHHHHHcCCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCChH-HHHHHHHHHHHHhcC-CCCcccEEEEe
Confidence 346899999999999999886543222 111 233555667777776 668889999988876 44567777766
Q ss_pred C
Q 006776 585 G 585 (631)
Q Consensus 585 ~ 585 (631)
.
T Consensus 194 ~ 194 (206)
T PF01514_consen 194 Q 194 (206)
T ss_dssp E
T ss_pred C
Confidence 4
No 178
>PRK07503 methionine gamma-lyase; Provisional
Probab=43.54 E-value=1.8e+02 Score=30.53 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=43.4
Q ss_pred CCCCCEEEEEccCChHHHH-HHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPI-AMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v-~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+-.+.-..... ...++.+.|+.+..++.. ..+++...+.. +.++|++.......+...++..+
T Consensus 101 l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I 172 (403)
T PRK07503 101 LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-DPAALKAAISD-KTRMVYFETPANPNMRLVDIAAV 172 (403)
T ss_pred cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC-CHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHH
Confidence 6899998775542221221 223455688888777663 56777777754 67888876544444555555444
No 179
>PLN03052 acetate--CoA ligase; Provisional
Probab=43.50 E-value=1.5e+02 Score=34.05 Aligned_cols=99 Identities=12% Similarity=0.069 Sum_probs=64.8
Q ss_pred CCCCeEEEeCCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecC
Q 006776 239 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 316 (631)
Q Consensus 239 ~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~ 316 (631)
++.+|++.-..+..|.+ ...+|...+..... .......+++++|++...++..--+ +..+++++..|+..+....
T Consensus 189 pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 189 DDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeCC
Confidence 56777665433321222 13356665432222 1222357899999998887765432 4567888999998887764
Q ss_pred CCCCCChhHHHHHHHHhCCcEEeecHH
Q 006776 317 APTYPDSGRSWDIVDKYKVTIFYTAPT 343 (631)
Q Consensus 317 ~~~~~~~~~~~~~i~~~~vt~l~~~P~ 343 (631)
. +.++.+...+++.+++++++...
T Consensus 266 ~---~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 S---FAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred C---CCHHHHHHHHHhcCceEEEEcCc
Confidence 3 47889999999999999988664
No 180
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.11 E-value=2.2e+02 Score=31.30 Aligned_cols=99 Identities=17% Similarity=0.127 Sum_probs=65.9
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH-HHHHHHHHHHhCCEEEecCC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFA 142 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~-~~v~~lA~~~~G~v~v~l~~ 142 (631)
.++.+|++..... .+ ....+|++.+...+..+. .....++.++|++...+|-.-. .....++++..|+..+...+
T Consensus 179 ~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 179 DETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred CccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 4466676654321 11 234678877755443321 1234678899999988875433 23445777888887776666
Q ss_pred CCCHHHHHHHHHhcCceEEEEeCC
Q 006776 143 GFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 143 ~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.+.++.+...+++.++.+++....
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~ 281 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPT 281 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCH
Confidence 788999999999999999987654
No 181
>PRK05934 type III secretion system protein; Validated
Probab=42.88 E-value=1.7e+02 Score=29.03 Aligned_cols=72 Identities=19% Similarity=0.155 Sum_probs=52.0
Q ss_pred HHHHHHHhcCcccceEEE-EeeecCCCC-eeEEEEEE--eCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECCCC
Q 006776 514 AEVESALVSHPQCAEAAV-VGVEHEVKG-QGIYAFVT--LVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGL 586 (631)
Q Consensus 514 ~eIE~~l~~~~~V~~~~v-v~~~~~~~~-~~~~~~v~--~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~~l 586 (631)
.|+++.|.++++|.+|-| +..|.+... +.+-|-|+ ++++...+++..+.|...+...++ -..|..|-++|+-
T Consensus 74 GELaRTIesld~VesARVHLAlPe~s~~~~~pTASVvLtL~~G~tLs~~QV~gIvnLVAsSVp-GLtpEnVTVVDq~ 149 (341)
T PRK05934 74 EQLEKDLTMFHPVAQATVALSLETEDDPMSPAEISVILSLPKAETLSPSLLHSITDYLTSSVP-GLTKEHITLSDNL 149 (341)
T ss_pred HHHHHHHHcccCcceeEEEEeCCCCCccCCCCceEEEEecCCCCcCCHHHHHHHHHHHHhcCC-CCCccCeEEECCC
Confidence 578888889999999988 444544322 23334444 477777887788899999988876 5678899999864
No 182
>PRK07050 cystathionine beta-lyase; Provisional
Probab=42.28 E-value=4.2e+02 Score=27.61 Aligned_cols=58 Identities=16% Similarity=0.023 Sum_probs=33.9
Q ss_pred CCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 107 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+++||.|.+.-+........+ ..+.+.|+.+..+++. ..+.+...++ -+.++|+++..
T Consensus 101 ~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~-~~~~l~~~i~-~~tklV~le~p 159 (394)
T PRK07050 101 VKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL-IGAGIADLIQ-PNTRLIWLEAP 159 (394)
T ss_pred hCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC-CHHHHHHhcC-CCCeEEEEECC
Confidence 578888877666554433222 2345667777777653 3455665554 35677776544
No 183
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=41.96 E-value=1.3e+02 Score=32.17 Aligned_cols=89 Identities=13% Similarity=0.074 Sum_probs=60.6
Q ss_pred CCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCccccc
Q 006776 279 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 358 (631)
Q Consensus 279 ~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~ 358 (631)
..+||+++.-.|.++..- . ..-..|..++-.+-...-.+++.+-+.+++++|..++++|+.= .
T Consensus 176 ~~pGd~v~vE~PtY~~~~---~--~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q-----N------- 238 (459)
T COG1167 176 LDPGDTVLVEDPTYPGAL---Q--ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ-----N------- 238 (459)
T ss_pred CCCCCEEEEcCCCcHHHH---H--HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC-----C-------
Confidence 458999998888766432 2 2234677777766545556899999999999999999999731 0
Q ss_pred cCCCceeEEEEccCCCCHhHHHHHHHHhCCCCccee
Q 006776 359 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 394 (631)
Q Consensus 359 ~~l~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~ 394 (631)
+ +|..++.+-++.+.+.....++.|+
T Consensus 239 ---P-------tG~tms~~rR~~Ll~lA~~~~~~II 264 (459)
T COG1167 239 ---P-------TGVTMSLERRKALLALAEKYDVLII 264 (459)
T ss_pred ---C-------CCCccCHHHHHHHHHHHHHcCCeEE
Confidence 1 3667888877777665432234433
No 184
>PLN02565 cysteine synthase
Probab=41.90 E-value=2.1e+02 Score=28.95 Aligned_cols=67 Identities=16% Similarity=0.072 Sum_probs=49.0
Q ss_pred HHHHHCCC-CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 100 NYLKDIGV-KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 100 ~~L~~~Gv-~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
..+.+.|. .+|....+-...+-..+.+-++|..+|.-++.+-|.-.+..-...++..+++++++.+.
T Consensus 55 ~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 55 TDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 34445564 78855445455555666667788889988888777777788889999999999998653
No 185
>PRK06234 methionine gamma-lyase; Provisional
Probab=41.85 E-value=2.3e+02 Score=29.67 Aligned_cols=72 Identities=18% Similarity=0.143 Sum_probs=45.8
Q ss_pred CCCCCEEEEEccCChHHHHH-HHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIA-MLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 180 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~-~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 180 (631)
+++||.|.+..+.-...... ..++.+.|+.++.++.. ..+++...+.. +.++|+++.-....+...++..+.
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~ 172 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-NLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAIS 172 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-CHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHH
Confidence 57899887766544333333 24566788888887763 56777777753 567888766555555556654443
No 186
>PRK06188 acyl-CoA synthetase; Validated
Probab=41.49 E-value=2.2e+02 Score=30.72 Aligned_cols=95 Identities=11% Similarity=0.019 Sum_probs=66.5
Q ss_pred CCeeEEEEEcCCC-C--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCC
Q 006776 68 GDKVAIYWEANDP-G--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGF 144 (631)
Q Consensus 68 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~ 144 (631)
++++|.+...... + ....+|+..+...+.. .....+++.+|++...+|-+-.+...+++.+..|+..+... ..
T Consensus 167 ~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~ 242 (524)
T PRK06188 167 PPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KF 242 (524)
T ss_pred CCCeEEEEeCCCCCCCCceeeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CC
Confidence 3457766543321 1 1345788777655443 34456888999999999877655566677788888776665 47
Q ss_pred CHHHHHHHHHhcCceEEEEeCC
Q 006776 145 SSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 145 ~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.++.+.+.+++.++.+++....
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~P~ 264 (524)
T PRK06188 243 DPAEVLRAIEEQRITATFLVPT 264 (524)
T ss_pred CHHHHHHHHHHhCCEEEEehHH
Confidence 7899999999999999887653
No 187
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=40.68 E-value=1.6e+02 Score=33.19 Aligned_cols=94 Identities=14% Similarity=0.036 Sum_probs=61.7
Q ss_pred CCCeEEEeCCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCC
Q 006776 240 EDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGA 317 (631)
Q Consensus 240 ~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~ 317 (631)
++++++.... +|.. ..+|.+.+..... .......+++++|++...++...-. ...+++++..|+..+.....
T Consensus 99 ~~~a~~~~~~--~~~~--~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~~ 172 (652)
T TIGR01217 99 TEPALLYVDE--THEP--APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSPD 172 (652)
T ss_pred CCeEEEEECC--CCCe--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCCC
Confidence 5566555422 2322 3456665433222 1222356899999999888776433 45678889999988776543
Q ss_pred CCCCChhHHHHHHHHhCCcEEeecH
Q 006776 318 PTYPDSGRSWDIVDKYKVTIFYTAP 342 (631)
Q Consensus 318 ~~~~~~~~~~~~i~~~~vt~l~~~P 342 (631)
...+.+...+++.++.++++..
T Consensus 173 ---~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 173 ---FGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred ---CCHHHHHHHHHhcCCcEEEEcc
Confidence 3678899999999999998754
No 188
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=40.58 E-value=4e+02 Score=30.07 Aligned_cols=69 Identities=12% Similarity=0.001 Sum_probs=50.8
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 349 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 349 (631)
..+++++|++...++-..-. ....++++..|+..+..... ..++.+..+++..+++++++....+..++
T Consensus 95 ~~Gv~~gd~V~i~~~n~~ew--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 95 ASGAEPGSRVGIYGSNCPQW--IVAMEACAAHSLICVPLYDT---LGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeccC---CCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 46899999987776654322 34567888999888776533 47888999999999999998876544444
No 189
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=40.56 E-value=1.1e+02 Score=33.12 Aligned_cols=73 Identities=21% Similarity=0.202 Sum_probs=58.4
Q ss_pred eecHHHHHHHHHHHHH-HHHHCCCCCCCEEEEEcc--CChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEE
Q 006776 85 TLTYSQLLQQVCQLAN-YLKDIGVKKGDAVIIYLP--MLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 161 (631)
Q Consensus 85 ~~Ty~eL~~~v~~~A~-~L~~~Gv~~gd~V~i~~~--n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 161 (631)
.+|.... -+.|. ...-.|+++.|+|-+.|| .+...++-+-+|+..|+. +.|...+|++..-.-..+.++.++
T Consensus 261 vith~r~----~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT-~VlrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 261 VITHLRY----LQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGAT-VVLRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHH----HHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCce-EEEecccchhhhHHHHHHhCCeee
Confidence 4665544 34444 445679999999999999 677888899999999988 557888999999999999998876
Q ss_pred E
Q 006776 162 I 162 (631)
Q Consensus 162 i 162 (631)
-
T Consensus 336 Q 336 (649)
T KOG1179|consen 336 Q 336 (649)
T ss_pred e
Confidence 4
No 190
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=40.44 E-value=1.4e+02 Score=33.20 Aligned_cols=98 Identities=11% Similarity=-0.061 Sum_probs=64.1
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEec
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 315 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~ 315 (631)
.++.+|++.... .+|. ...+|.+.+..... .......+++++|++...++...- ....+++++..|+..+...
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPE--AAIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCCEEeccC
Confidence 467777765322 1222 23466666433222 122234689999999888776543 3456788888999888765
Q ss_pred CCCCCCChhHHHHHHHHhCCcEEeecHH
Q 006776 316 GAPTYPDSGRSWDIVDKYKVTIFYTAPT 343 (631)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~vt~l~~~P~ 343 (631)
.. ..++.+...++..+++++++...
T Consensus 145 ~~---~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GG---FSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CC---CCHHHHHHHHHhcCCCEEEEcCc
Confidence 43 47788999999999999987654
No 191
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=40.31 E-value=2.2e+02 Score=28.20 Aligned_cols=69 Identities=16% Similarity=0.228 Sum_probs=44.1
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC----------CCCHHHHHHHHHh-cCceEEEEeCCcccCCcccc
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----------GFSSDSLAQRIMD-CKPKVVITSNAVKRGPKAIH 175 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~----------~~~~~~l~~~l~~-~~~~~ii~~~~~~~~~~~~~ 175 (631)
+++||.|.+.-+...- .+-++...|+.++.+.+ ....+.+...+++ .++++++.+... ..+...+
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~-~~G~~~d 171 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPT-YYGICYN 171 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCC-CCCEecC
Confidence 5789988877554322 34456678887776654 3568889888875 567877766443 3455556
Q ss_pred cHHH
Q 006776 176 LKDI 179 (631)
Q Consensus 176 ~~~~ 179 (631)
++.+
T Consensus 172 l~~I 175 (294)
T cd00615 172 LRKI 175 (294)
T ss_pred HHHH
Confidence 5443
No 192
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=39.97 E-value=3.6e+02 Score=29.38 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=66.3
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++..... .+ ....+|+..+...+.. .....+++++|++...+|-+- .++..+++++..|+..+..
T Consensus 195 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~- 270 (547)
T PRK13295 195 GPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVP---YAERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQ- 270 (547)
T ss_pred CCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHH---HHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeC-
Confidence 3467777754332 11 2346788877655544 334567899999998888652 3455677888899887665
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+..+.+...+++.++.++++...
T Consensus 271 ~~~~~~~~~~~l~~~~vt~~~~~p~ 295 (547)
T PRK13295 271 DIWDPARAAELIRTEGVTFTMASTP 295 (547)
T ss_pred CCCCHHHHHHHHHHcCCcEEEecHH
Confidence 4578899999999999998876543
No 193
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=39.73 E-value=2.8e+02 Score=30.27 Aligned_cols=98 Identities=20% Similarity=0.217 Sum_probs=69.8
Q ss_pred CCCeeEEEEEcCCC---CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--hHHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEANDP---GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~~---~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~--~~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++...... -....+|++.+...+..+...+... +++.|++...+|-. .-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 36778877543210 1345689999988866665555432 78899888888843 455667788899999888777
Q ss_pred C-CCCHHHHHHHHHhcCceEEEEeC
Q 006776 142 A-GFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 142 ~-~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+ .+.++.+...+.+.++..+....
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vP 272 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVP 272 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecch
Confidence 5 69999999999988866665544
No 194
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=39.59 E-value=2.1e+02 Score=30.26 Aligned_cols=67 Identities=24% Similarity=0.221 Sum_probs=45.6
Q ss_pred ecHHHHHHHHHHH--------------H-HHHHHCCCCCCCEEEEEccCChHHHHHHHH-HHHhCCEEEec--C------
Q 006776 86 LTYSQLLQQVCQL--------------A-NYLKDIGVKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVV--F------ 141 (631)
Q Consensus 86 ~Ty~eL~~~v~~~--------------A-~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA-~~~~G~v~v~l--~------ 141 (631)
-||.+|.+.+..+ | +.|...++++||.| |+ ..++.+.-| +...|++++-+ +
T Consensus 71 ~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV----ps-n~~f~Tt~ahIe~~Gav~vDi~~dea~~~~ 145 (450)
T TIGR02618 71 RNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV----PG-NMYFTTTRYHQEKNGATFVDIIIDEAHDAQ 145 (450)
T ss_pred CcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE----CC-ceeHHHHHHHHHhCCeEEEeeecccccccc
Confidence 3788888775543 2 23446789999976 43 555566666 68888887777 2
Q ss_pred ------CCCCHHHHHHHHHhcC
Q 006776 142 ------AGFSSDSLAQRIMDCK 157 (631)
Q Consensus 142 ------~~~~~~~l~~~l~~~~ 157 (631)
..+..+.+...|+...
T Consensus 146 ~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 146 LNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred cCCCCCCCcCHHHHHHHhcccc
Confidence 2357899999988643
No 195
>PLN02614 long-chain acyl-CoA synthetase
Probab=39.46 E-value=4.5e+02 Score=29.68 Aligned_cols=70 Identities=11% Similarity=0.003 Sum_probs=53.2
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHh
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMR 350 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~ 350 (631)
..|++++|++...++-..-. ....++++..|+..+..... ..++.+..+++..+++++++....+..+..
T Consensus 98 ~~Gv~~Gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vpl~~~---~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 167 (666)
T PLN02614 98 SVGVKDEAKCGIYGANSPEW--IISMEACNAHGLYCVPLYDT---LGAGAVEFIISHSEVSIVFVEEKKISELFK 167 (666)
T ss_pred HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEEecCC---CCHHHHHHHHhccCCCEEEECHHHHHHHHH
Confidence 56899999987777655432 35568889999988876543 377889999999999999998776665543
No 196
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=39.24 E-value=2.5e+02 Score=31.97 Aligned_cols=85 Identities=11% Similarity=0.022 Sum_probs=61.1
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHhcCCcc
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY 355 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~ 355 (631)
..+++++|++...++-..-. ....++++..|+..+..... ..++.+..+++..+++++++.+..+..+.+...
T Consensus 125 ~lG~~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~-- 197 (696)
T PLN02387 125 ALGHNKEERVAIFADTRAEW--LIALQGCFRQNITVVTIYAS---LGEEALCHSLNETEVTTVICDSKQLKKLIDISS-- 197 (696)
T ss_pred HhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCC---CCHHHHHHHHHccCCCEEEECHHHHHHHHHHhh--
Confidence 56899999987776654322 34567888899988876543 478889999999999999998888777765422
Q ss_pred ccccCCCceeEEEEcc
Q 006776 356 VTRYSRKSLRVLGSVG 371 (631)
Q Consensus 356 ~~~~~l~~lr~v~~~G 371 (631)
.++.++.+++-+
T Consensus 198 ----~~~~l~~ii~~~ 209 (696)
T PLN02387 198 ----QLETVKRVIYMD 209 (696)
T ss_pred ----ccCCceEEEEEC
Confidence 234566666544
No 197
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=38.96 E-value=2.4e+02 Score=29.19 Aligned_cols=64 Identities=19% Similarity=0.235 Sum_probs=41.8
Q ss_pred HHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC-----CCHHHHHHHHHhcCceEEEEe
Q 006776 97 QLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITS 164 (631)
Q Consensus 97 ~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 164 (631)
.+...|..+++++||.|.+-.+. +.....++...|+.++.++.+ ...+.+...+.. +.++|+..
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~ 128 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPV 128 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEe
Confidence 34445667788999987765443 334445667789888777532 467888887754 56777643
No 198
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=38.83 E-value=1.4e+02 Score=21.90 Aligned_cols=48 Identities=19% Similarity=0.157 Sum_probs=31.8
Q ss_pred echHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHHHhhc
Q 006776 511 IGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQI 571 (631)
Q Consensus 511 i~~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l 571 (631)
-...++.+.|.++|+|.+|..+. +....++.+..++ .+++.+.+.+.+
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~vt-----G~~d~~~~v~~~d--------~~~l~~~i~~~l 57 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSVT-----GEYDLILKVRARD--------MEELEEFIREKL 57 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEES-----SSSSEEEEEEESS--------HHHHHHHHHHTH
T ss_pred chHHHHHHHHHcCCCEEEEEEEe-----CCCCEEEEEEECC--------HHHHHHHHHHHh
Confidence 34678999999999999998883 3334666665543 445555555543
No 199
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=38.58 E-value=2.8e+02 Score=29.67 Aligned_cols=59 Identities=24% Similarity=0.356 Sum_probs=37.4
Q ss_pred CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC---CCCHHHHHHHHHhcCceEEEEeCCccc
Q 006776 108 KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA---GFSSDSLAQRIMDCKPKVVITSNAVKR 169 (631)
Q Consensus 108 ~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~ 169 (631)
++||+|++=-|. ...+.. +.-..|+-+++++. +..++.+...+++-++|++++......
T Consensus 177 ~pGd~v~vE~Pt-Y~~~~~--~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qN 238 (459)
T COG1167 177 DPGDTVLVEDPT-YPGALQ--ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQN 238 (459)
T ss_pred CCCCEEEEcCCC-cHHHHH--HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCC
Confidence 467777665442 233333 33344555554433 678899999999889999998876543
No 200
>PRK11761 cysM cysteine synthase B; Provisional
Probab=38.44 E-value=2.2e+02 Score=28.28 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=46.3
Q ss_pred HHHHCC-CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 101 YLKDIG-VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 101 ~L~~~G-v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
.+.+.| +++|++|... ..+-....+-++|...|.-+..+-|...+......++..+++++++..
T Consensus 53 ~a~~~g~~~~g~~vv~a-SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 53 QAEKRGEIKPGDTLIEA-TSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHcCCCCCCCEEEEe-CCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 344556 4778776554 445556666778888998777776665566778899999999999875
No 201
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=38.42 E-value=1.9e+02 Score=32.55 Aligned_cols=96 Identities=9% Similarity=-0.056 Sum_probs=62.9
Q ss_pred CCCCeEEEeCCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecC
Q 006776 239 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 316 (631)
Q Consensus 239 ~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~ 316 (631)
++.+|++.... .|. ...+|.+.+..... .......+++++|++...++...- ....+++++..|+..+....
T Consensus 98 ~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 98 DDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPE--TVVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCcEEEeeCC
Confidence 56677665322 221 23466665333221 122234689999999888876543 34567888999998887754
Q ss_pred CCCCCChhHHHHHHHHhCCcEEeecHH
Q 006776 317 APTYPDSGRSWDIVDKYKVTIFYTAPT 343 (631)
Q Consensus 317 ~~~~~~~~~~~~~i~~~~vt~l~~~P~ 343 (631)
. ...+.+...++..++.++++...
T Consensus 172 ~---~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 172 D---FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred C---CCHHHHHHHHHHcCCcEEEEccc
Confidence 3 36788999999999999887653
No 202
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=37.70 E-value=2.9e+02 Score=28.46 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=43.9
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC-----CCCHHHHHHHHHh---cCceEEEEeC
Q 006776 96 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA-----GFSSDSLAQRIMD---CKPKVVITSN 165 (631)
Q Consensus 96 ~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~-----~~~~~~l~~~l~~---~~~~~ii~~~ 165 (631)
..+...+..+++++||.|.+-.+. +....-++...|+.++.++. ....+.+...+.. -+.++|+...
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~ 129 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD 129 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC
Confidence 344455566788999987766554 34444567788987776543 2567888888874 3567776543
No 203
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=37.68 E-value=27 Score=26.04 Aligned_cols=30 Identities=30% Similarity=0.320 Sum_probs=17.1
Q ss_pred ecHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006776 86 LTYSQLLQQVCQLANYLKDIGVKKGDAVII 115 (631)
Q Consensus 86 ~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i 115 (631)
+-|-+-.-+..-+-..|++.|++.||.|-|
T Consensus 33 ~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 33 LRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 333333334444556788889999999987
No 204
>PRK09028 cystathionine beta-lyase; Provisional
Probab=37.61 E-value=2.8e+02 Score=28.96 Aligned_cols=68 Identities=10% Similarity=0.002 Sum_probs=32.5
Q ss_pred CCCCCEEEEEccCChHHHHHHH-HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCccccc
Q 006776 107 VKKGDAVIIYLPMLMELPIAML-ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHL 176 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 176 (631)
+++||+|.+.-+.-..+...+. .+.+.|..+..+++. ..+.+...+. -+.++|++..-....++..++
T Consensus 97 l~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-~~e~l~~~l~-~~TklV~lespsNPtg~v~dl 165 (394)
T PRK09028 97 LKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM-IGEGIRELIR-PNTKVLFLESPGSITMEVQDV 165 (394)
T ss_pred hCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC-CHHHHHHhcC-cCceEEEEECCCCCCCcHHHH
Confidence 5677777666554322222221 233456555555443 3355555553 346666665443333333333
No 205
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=37.58 E-value=2.5e+02 Score=29.47 Aligned_cols=72 Identities=14% Similarity=0.092 Sum_probs=41.6
Q ss_pred CCCCCEEEEEccCChHHHHHHHH-HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 180 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA-~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 180 (631)
+++||.|.+..|.-......+-. +.+.|..++.++. ...+.+...++. +.++|+.+......+...++..+.
T Consensus 96 l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~-~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~ 168 (405)
T PRK08776 96 LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL-TDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVI 168 (405)
T ss_pred hCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC-CCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHH
Confidence 57899988765544333222222 2345666666654 356777777754 678887765544445555554443
No 206
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=37.34 E-value=3.9e+02 Score=27.42 Aligned_cols=86 Identities=22% Similarity=0.238 Sum_probs=54.8
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC---CCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG---FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAA 183 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 183 (631)
..+||.|++..|.-.++- .++...|+.++-+... ...+.+...+.. ++++++.++-....++.+...++ ...
T Consensus 96 ~~~gd~vl~~~Ptf~~Y~---~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG~~~~~~~l-~~l 170 (356)
T COG0079 96 VEPGDTVLIPEPTFSMYE---IAAQLAGAEVVKVPLKEFRLDLDAILAAIRD-KTKLVFLCNPNNPTGTLLPREEL-RAL 170 (356)
T ss_pred hcCCCEEEEcCCChHHHH---HHHHhcCCeEEEecccccccCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHH-HHH
Confidence 467899999888755543 4456677665555442 455677777777 88999998776666666665433 344
Q ss_pred HHHhhhcCCCccEEEEEec
Q 006776 184 LDECAKSGISVDVCLTYEN 202 (631)
Q Consensus 184 ~~~~~~~~~~~~~vi~~~~ 202 (631)
++.+ +. ..++++++
T Consensus 171 ~~~~----~~-~~~vVvDE 184 (356)
T COG0079 171 LEAL----PE-GGLVVIDE 184 (356)
T ss_pred HHhC----CC-CcEEEEeC
Confidence 4444 44 55666654
No 207
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=37.01 E-value=3.1e+02 Score=30.52 Aligned_cols=99 Identities=23% Similarity=0.260 Sum_probs=67.6
Q ss_pred CCCCeeEEEEEcCC-C--CceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecC
Q 006776 66 GLGDKVAIYWEAND-P--GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVF 141 (631)
Q Consensus 66 ~~~~~~A~~~~~~~-~--~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~ 141 (631)
..||.+|.+..... . -.+..+||+-+..++..+...+. -++++|++..++|-.--+=-++ .++...|.+.+...
T Consensus 188 ~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~ 265 (613)
T COG1022 188 PKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK 265 (613)
T ss_pred CCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec
Confidence 46788886644321 1 13567999999888888776665 3889999999999653222222 45555554444332
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCCcc
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNAVK 168 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~~~ 168 (631)
.+...+..-+...+|.+++.....+
T Consensus 266 --~~~~~~~~dl~~~rPt~m~~VPRvw 290 (613)
T COG1022 266 --EDPRTLLEDLKEVRPTVMIGVPRVW 290 (613)
T ss_pred --CCHHHHHHHHHHhCCeEEeechHHH
Confidence 5678899999999999999876543
No 208
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=36.69 E-value=2.8e+02 Score=27.53 Aligned_cols=64 Identities=14% Similarity=0.061 Sum_probs=45.2
Q ss_pred HHHCC-CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 102 LKDIG-VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 102 L~~~G-v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
..+.| +.+|++|. ....+-.-..+-++|.+.|.-+..+-|...++.....++..+++++++...
T Consensus 48 a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 48 AEKRGLLKPGKTIV-EPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHcCCCCCCCEEE-EeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 44556 47888774 444445556666778889987777766555556688899999999998754
No 209
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=36.60 E-value=40 Score=25.10 Aligned_cols=19 Identities=37% Similarity=0.553 Sum_probs=15.3
Q ss_pred HHHHHHHCCCCCCCEEEEE
Q 006776 98 LANYLKDIGVKKGDAVIIY 116 (631)
Q Consensus 98 ~A~~L~~~Gv~~gd~V~i~ 116 (631)
+-..|++.|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4456778899999999875
No 210
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=36.37 E-value=3e+02 Score=28.56 Aligned_cols=70 Identities=19% Similarity=0.192 Sum_probs=42.9
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC--C----CCHHHHHHHHHhc------CceEEEEeCCcccCCccc
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA--G----FSSDSLAQRIMDC------KPKVVITSNAVKRGPKAI 174 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~--~----~~~~~l~~~l~~~------~~~~ii~~~~~~~~~~~~ 174 (631)
+++||.|.+--+ .+...+.++...|+.++.++. + ...+.+...++.. ++++|+++......+...
T Consensus 99 ~~~gd~Vlv~~~---~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~ 175 (387)
T PRK09331 99 CKKGDYVVLDGL---AHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA 175 (387)
T ss_pred cCCCCEEEECCC---chHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc
Confidence 478998876533 223334467778988777654 1 5688888888753 678887765443334444
Q ss_pred ccHHH
Q 006776 175 HLKDI 179 (631)
Q Consensus 175 ~~~~~ 179 (631)
++.++
T Consensus 176 ~l~~I 180 (387)
T PRK09331 176 DAKKV 180 (387)
T ss_pred cHHHH
Confidence 44333
No 211
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.86 E-value=3.7e+02 Score=29.14 Aligned_cols=96 Identities=14% Similarity=0.069 Sum_probs=67.1
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++++|++..... .+ ....+|+..+...+.... ...++.++|++...+|-.- .+...+++++..|+..+..+
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSV---LWSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHH---HhhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 4577887755432 11 235688888876655433 3346788999988887532 23456678899999877765
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.+..+.+...+++.++.++.+...
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~ 288 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPT 288 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHH
Confidence 478889999999999998877653
No 212
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=35.85 E-value=2.7e+02 Score=29.51 Aligned_cols=76 Identities=12% Similarity=0.178 Sum_probs=44.5
Q ss_pred HHHHCCCCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 101 YLKDIGVKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 101 ~L~~~Gv~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
.|..+ +++||+|++.-+.-......+ -.+.+.|+.++.++. ...+.+...++. +.++|++..-....+...++..+
T Consensus 95 al~~l-l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~-~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I 171 (431)
T PRK08248 95 SILNI-ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP-SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAV 171 (431)
T ss_pred HHHHH-hCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHH
Confidence 33343 678998876654322222222 234567888777765 467778777764 67777776444444555555433
No 213
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=35.84 E-value=2.9e+02 Score=29.26 Aligned_cols=72 Identities=11% Similarity=0.192 Sum_probs=41.2
Q ss_pred CCCCCEEEEEccCChHH-HHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHH
Q 006776 107 VKKGDAVIIYLPMLMEL-PIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 180 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~-~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 180 (631)
+++||.|.+........ -.....+.+.|+.+..++++ ..+.+...|+. +.++|++.......+...++..+.
T Consensus 100 l~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~ 172 (433)
T PRK08134 100 MGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVA 172 (433)
T ss_pred hCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHH
Confidence 67899875554322211 11122346788888888764 56777777764 567777665443334445554443
No 214
>PRK13388 acyl-CoA synthetase; Provisional
Probab=35.84 E-value=4.2e+02 Score=28.87 Aligned_cols=94 Identities=12% Similarity=0.118 Sum_probs=61.5
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH--HHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~--~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++..... .+ ....+|...+...+..+. ...+++++|++...+|..-. .+..+++.+..|+..+. .
T Consensus 148 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~ 223 (540)
T PRK13388 148 DAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALT---ERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-P 223 (540)
T ss_pred CCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHH---HHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-C
Confidence 3577777754332 11 234688888765554443 44578999999888875422 22334456777776553 4
Q ss_pred CCCCHHHHHHHHHhcCceEEEEe
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITS 164 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~ 164 (631)
+.++++.+...+++.++.++...
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~ 246 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYV 246 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEeh
Confidence 66788999999999999987644
No 215
>PRK07638 acyl-CoA synthetase; Validated
Probab=35.83 E-value=2.9e+02 Score=29.44 Aligned_cols=81 Identities=12% Similarity=0.158 Sum_probs=58.8
Q ss_pred eeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh-HHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEE
Q 006776 83 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 161 (631)
Q Consensus 83 ~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~-~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 161 (631)
...+|.+.+...+.. .....+++++|++....+-.. .++..++..+..|+..+.. +.+.++.+...+++.++.++
T Consensus 160 gv~~s~~~~~~~~~~---~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 235 (487)
T PRK07638 160 AFLRAQQSWLHSFDC---NVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVM 235 (487)
T ss_pred EEEEecHHHHHHHHH---HHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEE
Confidence 346777777655443 334567889999988776443 3355666778889887754 56889999999999999999
Q ss_pred EEeCCc
Q 006776 162 ITSNAV 167 (631)
Q Consensus 162 i~~~~~ 167 (631)
......
T Consensus 236 ~~~P~~ 241 (487)
T PRK07638 236 YTVPTM 241 (487)
T ss_pred EeCcHH
Confidence 887643
No 216
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=35.74 E-value=2.8e+02 Score=31.82 Aligned_cols=84 Identities=15% Similarity=0.087 Sum_probs=59.5
Q ss_pred cCCCCC-----------cEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHH
Q 006776 277 FDYKPS-----------DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLV 345 (631)
Q Consensus 277 ~~~~~~-----------d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l 345 (631)
.|+.++ |++...++-..-. ....++++..|+..|..... ..++.+..+++.-++.++++.+..+
T Consensus 114 ~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew--~~~~lA~~~~Gav~Vpl~~~---~~~~el~~il~~s~~~~lv~~~~~~ 188 (746)
T PTZ00342 114 KGIPEKKYNEEQNNGKFKLLGLYGSNSINW--LVADLACMLSGVTTLVMHSK---FSIDVIVDILNETKLEWLCLDLDLV 188 (746)
T ss_pred cCCCcCccccccccccccEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCC---CCHHHHHHHHhcCCCCEEEEcHHHH
Confidence 488887 7776666544221 34567888899988876543 4788999999999999999988888
Q ss_pred HHHHhcCCccccccCCCceeEEEEcc
Q 006776 346 RSLMRDGNEYVTRYSRKSLRVLGSVG 371 (631)
Q Consensus 346 ~~l~~~~~~~~~~~~l~~lr~v~~~G 371 (631)
..+..... .++.++.+++-+
T Consensus 189 ~~l~~~~~------~~~~l~~ii~~~ 208 (746)
T PTZ00342 189 EGLLERKN------ELPHLKKLIILD 208 (746)
T ss_pred HHHHHhhc------cCCCceEEEEEC
Confidence 77765422 245676666543
No 217
>PRK09274 peptide synthase; Provisional
Probab=35.18 E-value=2.9e+02 Score=30.12 Aligned_cols=99 Identities=9% Similarity=-0.079 Sum_probs=61.2
Q ss_pred CCCCeEEEeCCCCC-CCCceEEEcCchHHHHHHH--HHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEec
Q 006776 239 AEDPLFLLYTSGST-GKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 315 (631)
Q Consensus 239 ~~~~~~i~~TSGTT-G~PK~v~~t~~~~l~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~ 315 (631)
++.++++....++. ...+...+|...+...... ......+++++|++...++-+.-. ...+++++..|+..+...
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF--FALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH--HHHHHHHHHcCeEEEEcC
Confidence 45666654332221 1122224566654332221 112246889999998887655433 456788899999888765
Q ss_pred CCCCCCChhHHHHHHHHhCCcEEeecH
Q 006776 316 GAPTYPDSGRSWDIVDKYKVTIFYTAP 342 (631)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~vt~l~~~P 342 (631)
.. ...+.+..++++.++..+.+.+
T Consensus 98 ~~---~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PG---MGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CC---ccHHHHHHHHHhcCCCEEEecc
Confidence 43 3677888899999999888754
No 218
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=34.58 E-value=3.7e+02 Score=30.26 Aligned_cols=86 Identities=10% Similarity=-0.048 Sum_probs=58.3
Q ss_pred EEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCc
Q 006776 259 LHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 336 (631)
Q Consensus 259 ~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt 336 (631)
.+|.+.+..... .......+++++|++...++-..-. ....++++..|+..+..... ...+.+..++++.+++
T Consensus 77 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~il~~s~~~ 151 (660)
T PLN02861 77 WLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDT---LGANAVEFIINHAEVS 151 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCC---CCHHHHHHHHHcCCCC
Confidence 356665433222 2222346899999987777655332 35568889999988876543 3778899999999999
Q ss_pred EEeecHHHHHHHH
Q 006776 337 IFYTAPTLVRSLM 349 (631)
Q Consensus 337 ~l~~~P~~l~~l~ 349 (631)
++++....+..+.
T Consensus 152 ~v~~~~~~~~~~~ 164 (660)
T PLN02861 152 IAFVQESKISSIL 164 (660)
T ss_pred EEEECHHHHHHHH
Confidence 9998776655553
No 219
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=34.51 E-value=2.3e+02 Score=22.37 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHCC---------CCCCCEEEEEc-cCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHH
Q 006776 88 YSQLLQQVCQLANYLKDIG---------VKKGDAVIIYL-PMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRI 153 (631)
Q Consensus 88 y~eL~~~v~~~A~~L~~~G---------v~~gd~V~i~~-~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l 153 (631)
..+.-++..++...+.+.| .++-|.|.|+= |+......+.|++...|.+-.-.-+.++.+++..++
T Consensus 15 ~~~~~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 15 IKDSPDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIV 90 (91)
T ss_pred HhhcHHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHh
Confidence 3344555555666666666 35567777776 555556668889999998888777888988887765
No 220
>PRK07788 acyl-CoA synthetase; Validated
Probab=34.29 E-value=2.1e+02 Score=31.20 Aligned_cols=69 Identities=13% Similarity=0.110 Sum_probs=53.2
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 349 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 349 (631)
..+++++|++...++-+. .....+++++..|+..+..+.. ...+.+..++++.+++.+.+.+.....+.
T Consensus 93 ~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 161 (549)
T PRK07788 93 ALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTG---FSGPQLAEVAAREGVKALVYDDEFTDLLS 161 (549)
T ss_pred HcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCC---CCHHHHHHHHHhcCCcEEEECchhHHHHH
Confidence 458899999887765543 2345678899999999988653 36788999999999999998887665553
No 221
>PRK05967 cystathionine beta-lyase; Provisional
Probab=34.24 E-value=3.2e+02 Score=28.50 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=31.8
Q ss_pred CCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 107 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+++||+|.+..+.-..+...+ -.+-+.|.-+..+++. ..+.+...++. +.++|+...-
T Consensus 100 l~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-~~e~l~~al~~-~TklV~lesP 158 (395)
T PRK05967 100 LSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-IGAGIAKLMRP-NTKVVHTEAP 158 (395)
T ss_pred cCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-CHHHHHHhcCc-CceEEEEECC
Confidence 577887777655443333222 2345667666666543 23556665543 4566666543
No 222
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=34.08 E-value=2.3e+02 Score=31.66 Aligned_cols=96 Identities=14% Similarity=-0.018 Sum_probs=61.9
Q ss_pred CCCCeEEEeCCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecC
Q 006776 239 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 316 (631)
Q Consensus 239 ~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~ 316 (631)
++.+|++.. +..+|. .-.+|.+.+..... .......+++++|++...++...-. ...+++++..|+..+...+
T Consensus 67 p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 67 PEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCC
Confidence 566776543 222232 23356665432221 1222356899999998887765433 3567888999998777654
Q ss_pred CCCCCChhHHHHHHHHhCCcEEeecH
Q 006776 317 APTYPDSGRSWDIVDKYKVTIFYTAP 342 (631)
Q Consensus 317 ~~~~~~~~~~~~~i~~~~vt~l~~~P 342 (631)
. ...+.+...++..++.++++..
T Consensus 142 ~---~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 G---FASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred C---CCHHHHHHHHHhcCCcEEEEcc
Confidence 3 3678899999999999988754
No 223
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=33.78 E-value=3.4e+02 Score=28.27 Aligned_cols=72 Identities=8% Similarity=0.068 Sum_probs=42.7
Q ss_pred CCCCCEEEEEccCChHHHHHHHH-HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 180 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA-~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 180 (631)
+++||+|.+..+.....+..+-. +.+.|.....++. ...+.+...+.. +.++|+.+......+...++..+.
T Consensus 89 l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~ 161 (388)
T PRK08861 89 LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-SDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELC 161 (388)
T ss_pred cCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC-CCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHH
Confidence 57899888765543322222212 2245666666653 456777777754 678888876555556666665443
No 224
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=33.28 E-value=87 Score=25.78 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=32.0
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCC
Q 006776 96 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGA 135 (631)
Q Consensus 96 ~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~ 135 (631)
..+...+..+|+.+++.|.+++.++.....+...+..+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 3456677888999999999999888777777777778885
No 225
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=33.28 E-value=2.3e+02 Score=31.66 Aligned_cols=96 Identities=15% Similarity=-0.038 Sum_probs=62.7
Q ss_pred CCCCeEEEeCCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecC
Q 006776 239 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 316 (631)
Q Consensus 239 ~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~ 316 (631)
++.+|++.. +..+|. .-.+|.+.+..... .......|++++|++...++...- ....+++++..|+..+....
T Consensus 66 p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 66 GEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE--AVFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecCC
Confidence 566776543 222232 12456665432221 222235699999999888776543 34567888999998877654
Q ss_pred CCCCCChhHHHHHHHHhCCcEEeecH
Q 006776 317 APTYPDSGRSWDIVDKYKVTIFYTAP 342 (631)
Q Consensus 317 ~~~~~~~~~~~~~i~~~~vt~l~~~P 342 (631)
. ...+.+...++..+++++++..
T Consensus 141 ~---~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 G---FASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred C---CCHHHHHHHHHhcCceEEEECC
Confidence 3 3678899999999999988754
No 226
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=33.05 E-value=1.8e+02 Score=25.11 Aligned_cols=113 Identities=6% Similarity=-0.094 Sum_probs=0.0
Q ss_pred EEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecH--HHHHHHHhcCCccccccCC
Q 006776 284 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAP--TLVRSLMRDGNEYVTRYSR 361 (631)
Q Consensus 284 ~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P--~~l~~l~~~~~~~~~~~~l 361 (631)
++.+.-.=.|..|........-..|-.++..... ..++.+.+.+.+++++++..+- +.....++...+......+
T Consensus 7 l~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~---vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~ 83 (137)
T PRK02261 7 VLGVIGADCHAVGNKILDRALTEAGFEVINLGVM---TSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGL 83 (137)
T ss_pred EEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCC---CCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCC
Q ss_pred CceeEEEEccCCCCHhHHHHHHHHhCCCCcceeccccccc
Q 006776 362 KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTE 401 (631)
Q Consensus 362 ~~lr~v~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~yg~tE 401 (631)
+.++.++.|.-..+.+.+....+.+. +.-+-..|+...
T Consensus 84 ~~~~i~vGG~~~~~~~~~~~~~~~l~--~~G~~~vf~~~~ 121 (137)
T PRK02261 84 GDILLYVGGNLVVGKHDFEEVEKKFK--EMGFDRVFPPGT 121 (137)
T ss_pred CCCeEEEECCCCCCccChHHHHHHHH--HcCCCEEECcCC
No 227
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=32.89 E-value=3.9e+02 Score=27.14 Aligned_cols=67 Identities=25% Similarity=0.291 Sum_probs=41.1
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC----CCCHHHHHHHHHhcCceEEEEeCCcccCCccccc
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHL 176 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~----~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 176 (631)
+++||.|++-.|.-. ....++...|+..+.++. ....+.+...+...++++++.+......+...+.
T Consensus 97 ~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~ 167 (351)
T PRK14807 97 INKGDVVIYPHPSFA---MYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER 167 (351)
T ss_pred cCCCCEEEEeCCChH---HHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 568999887655432 233455667876666543 2456778777776678888766544334444443
No 228
>PLN02246 4-coumarate--CoA ligase
Probab=32.85 E-value=2.9e+02 Score=29.95 Aligned_cols=99 Identities=12% Similarity=-0.003 Sum_probs=63.8
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHH--HHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEec
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT--FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 315 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~ 315 (631)
.++.++++... +| -.+|...+....... .....+++++|++...++-+. .....+++++..|+..+..+
T Consensus 36 ~~~~~a~~~~~---~~----~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~ 106 (537)
T PLN02246 36 FSDRPCLIDGA---TG----RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTAN 106 (537)
T ss_pred CCCCeEEEecC---CC----ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecCC
Confidence 35667755321 12 246766643332211 122468999999888766553 23456788888899888775
Q ss_pred CCCCCCChhHHHHHHHHhCCcEEeecHHHHHHH
Q 006776 316 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 348 (631)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 348 (631)
.. ...+.+..+++..++..+.+.......+
T Consensus 107 ~~---~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 107 PF---YTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CC---CCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 43 3678889999999999998876655444
No 229
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=32.82 E-value=2.7e+02 Score=29.65 Aligned_cols=67 Identities=19% Similarity=0.151 Sum_probs=43.1
Q ss_pred ecHHHHHHHHHHH--------------HHH-HHHCCCCCCCEEEEEccCChHHHHHHHH-HHHhCCEEEec---------
Q 006776 86 LTYSQLLQQVCQL--------------ANY-LKDIGVKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVV--------- 140 (631)
Q Consensus 86 ~Ty~eL~~~v~~~--------------A~~-L~~~Gv~~gd~V~i~~~n~~~~~v~~lA-~~~~G~v~v~l--------- 140 (631)
-||.+|.+.+..+ |.. |..+++++||.| |.. .++.+.-| +...|++++-+
T Consensus 78 ~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V----p~n-~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~ 152 (460)
T PRK13237 78 RNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV----PGN-MYFTTTRYHQELNGGIFVDIIIDEAHDAQ 152 (460)
T ss_pred CcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE----CCc-cchHhhHHHHHhCCcEEEeeecccccccc
Confidence 3777777776544 322 345689999965 333 33344444 78888887744
Q ss_pred -----CCCCCHHHHHHHHHhcC
Q 006776 141 -----FAGFSSDSLAQRIMDCK 157 (631)
Q Consensus 141 -----~~~~~~~~l~~~l~~~~ 157 (631)
...+..+.+...|....
T Consensus 153 ~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 153 SDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cCCCCCCCcCHHHHHHHhcccc
Confidence 33578899999987643
No 230
>PRK05850 acyl-CoA synthetase; Validated
Probab=32.78 E-value=4e+02 Score=29.23 Aligned_cols=106 Identities=14% Similarity=0.112 Sum_probs=65.4
Q ss_pred CCCCCeEEEeCC-C-CCCCCceEEEcCchHHHHH---HHHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEE
Q 006776 238 DAEDPLFLLYTS-G-STGKPKGVLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVV 312 (631)
Q Consensus 238 ~~~~~~~i~~TS-G-TTG~PK~v~~t~~~~l~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v 312 (631)
.++.++++.... + ..|. ...+|...+.... +..+. ..+ .++|++...++-+.-. ...+++++..|+..+
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~-~~g-~~gd~V~l~~~n~~~~--~~~~lA~~~~G~v~v 87 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELR-RHG-STGDRAVILAPQGLEY--IVAFLGALQAGLIAV 87 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHH-HhC-CCCCEEEEEcCCcccH--HHHHHHHHHcCceEE
Confidence 356676654321 1 1222 2346666643322 22222 345 5789988887766433 456788899999888
Q ss_pred EecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHH
Q 006776 313 VFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 349 (631)
Q Consensus 313 l~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 349 (631)
..+........+.+..+++..++..+.+.+.....+.
T Consensus 88 pl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 88 PLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred ecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH
Confidence 8753211125678889999999999999887766553
No 231
>PRK07529 AMP-binding domain protein; Validated
Probab=32.64 E-value=2.4e+02 Score=31.59 Aligned_cols=96 Identities=10% Similarity=0.113 Sum_probs=59.6
Q ss_pred CCCCCeEEEeCCC-CCCCCceEEEcCchHHHHHHH--HHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEe
Q 006776 238 DAEDPLFLLYTSG-STGKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 314 (631)
Q Consensus 238 ~~~~~~~i~~TSG-TTG~PK~v~~t~~~~l~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~ 314 (631)
.++.++++....+ ..+. ...+|.+.+...... ......+++++|++...++-..-. ...+++++..|.. +..
T Consensus 38 ~p~~~Al~~~~~~~~~~~--~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~-~pi 112 (632)
T PRK07529 38 HPDAPALSFLLDADPLDR--PETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIA-NPI 112 (632)
T ss_pred CCCCceEEeecccCCCCC--CceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEE-EeC
Confidence 4677777665332 2222 334566654322221 222346899999998887765433 3566787877743 322
Q ss_pred cCCCCCCChhHHHHHHHHhCCcEEeec
Q 006776 315 EGAPTYPDSGRSWDIVDKYKVTIFYTA 341 (631)
Q Consensus 315 ~~~~~~~~~~~~~~~i~~~~vt~l~~~ 341 (631)
. +. ..++.+..++++.++.++.+.
T Consensus 113 ~--~~-~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 113 N--PL-LEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred C--Cc-CCHHHHHHHHHhcCCcEEEEe
Confidence 2 23 378889999999999998885
No 232
>PRK05852 acyl-CoA synthetase; Validated
Probab=32.34 E-value=5e+02 Score=28.08 Aligned_cols=81 Identities=16% Similarity=0.164 Sum_probs=58.3
Q ss_pred eeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEe-cCCCCCHHHHHHHHHhcCce
Q 006776 83 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSV-VFAGFSSDSLAQRIMDCKPK 159 (631)
Q Consensus 83 ~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~-l~~~~~~~~l~~~l~~~~~~ 159 (631)
...+|+..+...+..+.. ..+++++|++..++|..- .++..+++++..|+..+. -...+.+..+...+++.++.
T Consensus 193 gv~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t 269 (534)
T PRK05852 193 MVPWTHANIASSVRAIIT---GYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGAT 269 (534)
T ss_pred EEEecHHHHHHHHHHHHH---HhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCc
Confidence 345788888766665544 346889999988887543 455567788887776443 23457788899999999999
Q ss_pred EEEEeCC
Q 006776 160 VVITSNA 166 (631)
Q Consensus 160 ~ii~~~~ 166 (631)
.++....
T Consensus 270 ~~~~~P~ 276 (534)
T PRK05852 270 WYTAVPT 276 (534)
T ss_pred EEEcChH
Confidence 8887664
No 233
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=32.25 E-value=3.7e+02 Score=27.96 Aligned_cols=71 Identities=13% Similarity=0.122 Sum_probs=38.8
Q ss_pred CCCCCEEEEEccCChHHHHHHH-HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAML-ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+--+........+. .+.+.|+.++.++.. ..+.+...+.. +.++|++.......+...++..+
T Consensus 97 ~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl~~I 168 (390)
T PRK08133 97 LQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT-DLDAWRAAVRP-NTKLFFLETPSNPLTELADIAAL 168 (390)
T ss_pred hCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-CHHHHHHhcCc-CCeEEEEECCCCCCCCcCCHHHH
Confidence 4688887664332222222221 345678777777653 56677766643 56777765444434444554433
No 234
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=32.13 E-value=2.6e+02 Score=31.40 Aligned_cols=96 Identities=8% Similarity=-0.042 Sum_probs=62.8
Q ss_pred CCCCeEEEeCCCCCCCCceEEEcCchHHHHHH--HHHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecC
Q 006776 239 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 316 (631)
Q Consensus 239 ~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~ 316 (631)
++.+|++.-.-+ .+ ....+|.+.+..... .......|+++||++...++..--. ...+++++..|+..+....
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~ 149 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVLFD 149 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCC
Confidence 456665543221 11 124467666432221 2222356999999999888766433 4567888899998877654
Q ss_pred CCCCCChhHHHHHHHHhCCcEEeecH
Q 006776 317 APTYPDSGRSWDIVDKYKVTIFYTAP 342 (631)
Q Consensus 317 ~~~~~~~~~~~~~i~~~~vt~l~~~P 342 (631)
. ..++.+...+++.+++++++..
T Consensus 150 ~---~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 150 G---YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred C---CCHHHHHHHHHhcCCCEEEEcc
Confidence 3 4789999999999999998764
No 235
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=31.88 E-value=3.8e+02 Score=27.83 Aligned_cols=80 Identities=14% Similarity=0.071 Sum_probs=45.1
Q ss_pred HHHHHHCCCCCCCEEEEEccCChHHHHHHHH-HHHhCCEEEecCC----CCCHHHHHHHHHhcCceEEEEeCCcccCCcc
Q 006776 99 ANYLKDIGVKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVVFA----GFSSDSLAQRIMDCKPKVVITSNAVKRGPKA 173 (631)
Q Consensus 99 A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA-~~~~G~v~v~l~~----~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 173 (631)
++.|....+++||.|.+.-+..+..+..+.. +-+.|+.+..+.. ....+.+...+.. +.++++.+......+..
T Consensus 98 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~t~lv~i~~~~n~tG~~ 176 (401)
T PRK10874 98 AQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITP-RTRILALGQMSNVTGGC 176 (401)
T ss_pred HHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCc-CcEEEEEeCCcccccCc
Confidence 3444333467899887776654443333333 3456766555433 2356777777743 56777666555555555
Q ss_pred cccHHH
Q 006776 174 IHLKDI 179 (631)
Q Consensus 174 ~~~~~~ 179 (631)
.++.++
T Consensus 177 ~~~~~i 182 (401)
T PRK10874 177 PDLARA 182 (401)
T ss_pred CCHHHH
Confidence 555444
No 236
>TIGR02544 III_secr_YscJ type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF.
Probab=31.84 E-value=2.8e+02 Score=25.61 Aligned_cols=69 Identities=16% Similarity=0.135 Sum_probs=44.2
Q ss_pred hHHHHHHHhcCcccceEEEEee-ecCC----CCee--EEEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEEC
Q 006776 513 TAEVESALVSHPQCAEAAVVGV-EHEV----KGQG--IYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWA 583 (631)
Q Consensus 513 ~~eIE~~l~~~~~V~~~~vv~~-~~~~----~~~~--~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v 583 (631)
-.|+++.|.++++|.+|-|.-. |... ..+. .-+++.++++...+. ..+.|+..+...++.. .|..|-++
T Consensus 109 e~EL~rtI~~i~~V~~ArVhl~~P~~~~f~~~~~~~sASV~l~~~~g~~l~~-qv~~I~~LVa~SV~~L-~~enVtVv 184 (193)
T TIGR02544 109 EQRLEQTLSQIDGVISARVHVVLPENDNNGRPKKPSSASVFIKYRPGLNLDA-LIPKIKRLVANSIPGL-DYDNVSVV 184 (193)
T ss_pred HHHHHHHHHhcCCeeeeEEEEECCCCCcccccCCCCcEEEEEEeCCCCCcHH-HHHHHHHHHHHhcCCC-CccceEEE
Confidence 4689999999999999988543 3321 1122 334455566655443 6788999998887643 45555444
No 237
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=31.69 E-value=3.6e+02 Score=26.80 Aligned_cols=64 Identities=14% Similarity=0.074 Sum_probs=44.8
Q ss_pred HHHCCC-CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 102 LKDIGV-KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 102 L~~~Gv-~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+.|. .+|+.|. ....+-.-..+-++|.+.|.-++.+-|...+..-...++..+++++++...
T Consensus 49 a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 49 AEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 445554 7788764 444455556666777889987777766555566678899999999998753
No 238
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=31.62 E-value=1.8e+02 Score=28.94 Aligned_cols=61 Identities=11% Similarity=0.148 Sum_probs=35.9
Q ss_pred hHHHHHHHhcCcccceEEEEeeecCCCCeeEEEEEEeCCCCCCc--HHHHHHHHHHHHhhcCC
Q 006776 513 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS--EELRKSLVLAVRKQIGA 573 (631)
Q Consensus 513 ~~eIE~~l~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~i~~~~~~~l~~ 573 (631)
..+|++.+.++|+|.++-=+-...-.....+-+.++++++.... .++.+++++.++++++.
T Consensus 215 ~~~I~~~i~~~~~v~~v~~l~~~~~G~~~~v~v~i~v~~~~~~~e~h~i~~~ie~~l~~~~~~ 277 (299)
T PRK09509 215 RQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQLHLEMEDNLPLVQAHMIADQVEQALLRRFPG 277 (299)
T ss_pred HHHHHHHHHhCCCCcCceeeeeEeeCCeEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 46788888899987764433332222223344556666554322 34567777777777664
No 239
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=31.32 E-value=1.8e+02 Score=30.96 Aligned_cols=58 Identities=22% Similarity=0.284 Sum_probs=38.8
Q ss_pred HCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC-----CCHHHHHHHHHhcCceEEEEeC
Q 006776 104 DIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 104 ~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+.++++||.|.+-.+.. .....++...|+.++.++.+ ...+.+...+.. +.++|+...
T Consensus 105 ~~~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~ 167 (438)
T PRK15407 105 DRALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAH 167 (438)
T ss_pred ccCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeC
Confidence 34889999987765544 44455666789887776542 457778777753 567777664
No 240
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=31.27 E-value=4.9e+02 Score=25.16 Aligned_cols=70 Identities=14% Similarity=0.120 Sum_probs=44.7
Q ss_pred HHHHHHHHHHCC-CCCCCEEEEEccCChHHHHHHHHHHHh------C--CEEEecCCC---CCHHHHHHHHHhcCceEEE
Q 006776 95 VCQLANYLKDIG-VKKGDAVIIYLPMLMELPIAMLACARI------G--AVHSVVFAG---FSSDSLAQRIMDCKPKVVI 162 (631)
Q Consensus 95 v~~~A~~L~~~G-v~~gd~V~i~~~n~~~~~v~~lA~~~~------G--~v~v~l~~~---~~~~~l~~~l~~~~~~~ii 162 (631)
..++.+.+.+.+ +.+||+|++.+.-+.+.++++..+..+ | ..++-++.+ +..+.+..+.+..+..+.+
T Consensus 13 ~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v 92 (258)
T PRK10696 13 RRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHI 92 (258)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEE
Confidence 445556677765 578999999999999998877666443 2 233444443 2344455566666666655
Q ss_pred Ee
Q 006776 163 TS 164 (631)
Q Consensus 163 ~~ 164 (631)
..
T Consensus 93 ~~ 94 (258)
T PRK10696 93 EE 94 (258)
T ss_pred EE
Confidence 43
No 241
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=31.23 E-value=3.1e+02 Score=29.57 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=51.4
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 348 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 348 (631)
..++.++|++....+-+.-. ...+++++..|+..+..... ..++.+...+++.+++.+++.+.....+
T Consensus 56 ~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 56 SLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPINAR---LLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEcCcc---cCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 46889999988877665433 34567888899988876543 3788899999999999998887655443
No 242
>PLN03013 cysteine synthase
Probab=31.18 E-value=3.4e+02 Score=28.69 Aligned_cols=65 Identities=14% Similarity=0.030 Sum_probs=47.8
Q ss_pred HHHCC-CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 102 LKDIG-VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 102 L~~~G-v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+.| +++|....+-.-.+-.-+.+-++|...|.-++.+-|.-.+.+...+++..+++++++++.
T Consensus 165 a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 34455 578855555555666667777788889987777766666777789999999999998653
No 243
>PRK07470 acyl-CoA synthetase; Validated
Probab=30.92 E-value=5.4e+02 Score=27.75 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=61.6
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEec-CC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV-FA 142 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l-~~ 142 (631)
.++.+|++..... .+ ....+|...|...+......+ ..+..++|++..++|-+-.+-...+..+..|+..+.+ ..
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADL-MPGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHh-ccCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 3467777755432 11 244678887754333211111 1267889999998886644333334344555554444 34
Q ss_pred CCCHHHHHHHHHhcCceEEEEeCCc
Q 006776 143 GFSSDSLAQRIMDCKPKVVITSNAV 167 (631)
Q Consensus 143 ~~~~~~l~~~l~~~~~~~ii~~~~~ 167 (631)
.++++.+...|++.++.++.+....
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~ 264 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTI 264 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHH
Confidence 6789999999999999999877643
No 244
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=30.45 E-value=4.1e+02 Score=26.43 Aligned_cols=61 Identities=15% Similarity=0.106 Sum_probs=45.9
Q ss_pred HCC-CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 104 DIG-VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 104 ~~G-v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+.| +++|++| |=.-.+---+.+.+.|...|.-++.+-|...+.+-+.+|+..++.++++..
T Consensus 55 ~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 445 8999943 333344556666677778898888877777777778999999999999987
No 245
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=30.19 E-value=2.8e+02 Score=30.30 Aligned_cols=70 Identities=17% Similarity=0.019 Sum_probs=54.6
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHHh
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMR 350 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~ 350 (631)
..++++++++....+-..-. ...+++++..|+..+..+.. ...+.+..++++.+++.+++.+.....+.+
T Consensus 65 ~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~---~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~ 134 (542)
T PRK06155 65 AAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTA---LRGPQLEHILRNSGARLLVVEAALLAALEA 134 (542)
T ss_pred HcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccc---cCHHHHHHHHHhcCceEEEEChhhHHHHHH
Confidence 46889999988876665433 45678889999998887643 367889999999999999998877766544
No 246
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=30.14 E-value=2.9e+02 Score=30.86 Aligned_cols=98 Identities=10% Similarity=-0.117 Sum_probs=64.1
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHHH--HHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEec
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT--FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 315 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~ 315 (631)
.++.+|++.... . + .....+|.+.+....... .....+++++|++...++-..-. ...+++++..|+..+...
T Consensus 80 ~p~~~Al~~~~~-~-~-~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGD-D-P-GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECC-C-C-CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecC
Confidence 367777764321 1 1 123456777643322221 12346889999998887765433 456788899999888775
Q ss_pred CCCCCCChhHHHHHHHHhCCcEEeecHH
Q 006776 316 GAPTYPDSGRSWDIVDKYKVTIFYTAPT 343 (631)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~vt~l~~~P~ 343 (631)
.. ..++.+...++..+++++++...
T Consensus 155 ~~---~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GG---FSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CC---CCHHHHHHHHHhcCCcEEEEcCc
Confidence 43 37788999999999999987653
No 247
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=30.13 E-value=4.1e+02 Score=28.80 Aligned_cols=96 Identities=16% Similarity=0.082 Sum_probs=65.8
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHH---HHHHHHHHhCCEEEec
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP---IAMLACARIGAVHSVV 140 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~---v~~lA~~~~G~v~v~l 140 (631)
.++.+|++..... .+ ....+|...+...+.... ...+++++|++...+|-.-.+- ..+++++..|+..+..
T Consensus 180 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 180 PADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHH---HhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 4567776644321 11 245688888877666543 3457889999998887543322 2467888889887654
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 141 FAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 141 ~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+...+..+...+++.++.++.....
T Consensus 257 -~~~~~~~~~~~l~~~~~t~~~~~p~ 281 (536)
T PRK10946 257 -PDPSATLCFPLIEKHQVNVTALVPP 281 (536)
T ss_pred -CCCCHHHHHHHHHHhCCcEEEeChH
Confidence 4567788889999999999887654
No 248
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=29.73 E-value=1.2e+02 Score=24.31 Aligned_cols=41 Identities=12% Similarity=0.009 Sum_probs=32.3
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCE
Q 006776 96 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAV 136 (631)
Q Consensus 96 ~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v 136 (631)
..+...+...++.+++.|.+++.+......+...+..+|.-
T Consensus 52 ~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 52 EEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred HHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 35666777778888999999999888777777778888863
No 249
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=29.57 E-value=6.7e+02 Score=26.20 Aligned_cols=62 Identities=18% Similarity=0.091 Sum_probs=35.4
Q ss_pred CCCCCEEEEEccCChHHHH----HHH-----HHHHhCCEEEecCC---CCCHHHHHHHHHhcCceEEEEeCCcc
Q 006776 107 VKKGDAVIIYLPMLMELPI----AML-----ACARIGAVHSVVFA---GFSSDSLAQRIMDCKPKVVITSNAVK 168 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v----~~l-----A~~~~G~v~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~ 168 (631)
+++||+|..+-...=-.+. .-. .....-.+..++++ ...-+++..+++..+||+|++..+..
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y 180 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSY 180 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SST
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhc
Confidence 4789999888755422211 111 22333456667774 35689999999999999999987654
No 250
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=29.53 E-value=4.6e+02 Score=31.77 Aligned_cols=97 Identities=12% Similarity=0.185 Sum_probs=68.3
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--hHHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~--~~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++++|.+..... .+ ....+|.+.+...+.... ...++.++|++...+|-. ..+...+++.+..|+..+...
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQIS---DVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHH---HhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 4678887755332 11 245688888876665443 345788999988887743 233344677788898877766
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
..+..+.+.+.+++.++.++.+...
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~ 881 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPT 881 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHH
Confidence 6678899999999999999987764
No 251
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=29.46 E-value=4.4e+02 Score=27.82 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=43.6
Q ss_pred CCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+..+........+ ..+.+.|+.++.++.. ..+.+...+.. +.++|+...-....+...++..+
T Consensus 99 l~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I 170 (427)
T PRK05994 99 LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD-DPASFERAITP-RTKAIFIESIANPGGTVTDIAAI 170 (427)
T ss_pred hCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC-CHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHH
Confidence 678999877655433222222 2355788888887763 56777777754 67888876544444555565443
No 252
>PRK07787 acyl-CoA synthetase; Validated
Probab=29.44 E-value=5.9e+02 Score=26.93 Aligned_cols=95 Identities=17% Similarity=0.137 Sum_probs=64.9
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--hHHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~--~~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++..... .+ ....+|+..+...+..++. ..++.++|++...+|-. ..++..+++++..|+..+...
T Consensus 126 ~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 126 DPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAE---AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHH---hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 4567776654332 11 2346788888776555443 45788999887777642 334566888999999887664
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
...++.+...++ .++.++.+...
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~ 225 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPT 225 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchH
Confidence 478889999999 88888776553
No 253
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=29.41 E-value=4.2e+02 Score=27.40 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=41.5
Q ss_pred CCCCCCEEEEEccCChHHHHHHH-HHHHhCCEEEecC--CC--CCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 106 GVKKGDAVIIYLPMLMELPIAML-ACARIGAVHSVVF--AG--FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 106 Gv~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l~--~~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
.+++||.|.+.-+..+..+..+. .+-+.|+.++.++ .+ ...+.+...+.. +.++++.+......+...+++.+
T Consensus 102 ~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~i 179 (398)
T TIGR03392 102 RLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP-RTRILALGQMSNVTGGCPDLARA 179 (398)
T ss_pred cCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc-CceEEEEECccccccccCCHHHH
Confidence 46789987776655444333332 3456677655553 32 356777777643 46777666544444555555443
No 254
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=29.20 E-value=1.1e+02 Score=23.39 Aligned_cols=43 Identities=21% Similarity=0.372 Sum_probs=35.8
Q ss_pred HHHHHH-CCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecC
Q 006776 99 ANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 99 A~~L~~-~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~ 141 (631)
..+|.+ .|+++|+.++.+...-.|.+..+=|+++..-+-+...
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~~ 46 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELATF 46 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEee
Confidence 356654 5999999999999999999999999999987665543
No 255
>PRK13383 acyl-CoA synthetase; Provisional
Probab=29.18 E-value=2.5e+02 Score=30.30 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=52.4
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 349 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 349 (631)
..++.+++++...++..- .....+++++..|+..+..+.. ...+.+..++++.+++.+.+.+.....+.
T Consensus 79 ~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~v~vpl~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 147 (516)
T PRK13383 79 RDGVAPGRAVGVMCRNGR--GFVTAVFAVGLLGADVVPISTE---FRSDALAAALRAHHISTVVADNEFAERIA 147 (516)
T ss_pred hcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEEEcCcc---CCHHHHHHHHhcCCCCEEEEchhHHHHHH
Confidence 458899999887765443 2345678888899998887643 37788999999999999999887765543
No 256
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=29.18 E-value=5.3e+02 Score=27.81 Aligned_cols=96 Identities=16% Similarity=0.068 Sum_probs=65.2
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHH--H-HHHHHHHhCCEEEec
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP--I-AMLACARIGAVHSVV 140 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~--v-~~lA~~~~G~v~v~l 140 (631)
.++++|++..... .+ ....+|...+...+... ....++.++|++...+|..-.+- . ..++++..|+..+.
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~- 256 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRS---VEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVL- 256 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHH---HhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEE-
Confidence 4677777654321 11 24568888876655543 34567889999998888653322 2 35777888887655
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 141 FAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 141 ~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.+...+..+...+++.++.++.....
T Consensus 257 ~~~~~~~~~~~~i~~~~~t~~~~~p~ 282 (527)
T TIGR02275 257 APDPSPTDCFPLIERHKVTVTALVPP 282 (527)
T ss_pred CCCCCHHHHHHHHHHhCCeEEEecHH
Confidence 44567888889999999999987754
No 257
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=29.08 E-value=5.8e+02 Score=27.15 Aligned_cols=97 Identities=11% Similarity=0.140 Sum_probs=66.2
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh-HHHHHHHHHHHhCCEEEecCC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFA 142 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~-~~~v~~lA~~~~G~v~v~l~~ 142 (631)
.++..+++..... .+ ....+|.+.+...+..+. ...++..+|++....|.+. ..+..+++++..|+..+.+++
T Consensus 139 ~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 215 (502)
T TIGR01734 139 KGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWML---ADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDK 215 (502)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHH---HhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCH
Confidence 3456666644332 11 235688888865554333 3468888998888877543 334567788999999887765
Q ss_pred C--CCHHHHHHHHHhcCceEEEEeCC
Q 006776 143 G--FSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 143 ~--~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
. .....+...+.+.++..+.....
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~~~p~ 241 (502)
T TIGR01734 216 DITNNFKLLFEELPKTGLNVWVSTPS 241 (502)
T ss_pred HHhcCHHHHHHHHHHcCCeEEEEChh
Confidence 3 46788889999999998887654
No 258
>PLN02654 acetate-CoA ligase
Probab=29.02 E-value=3e+02 Score=31.03 Aligned_cols=81 Identities=10% Similarity=-0.084 Sum_probs=57.3
Q ss_pred EEEcCchHHHHHHH--HHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCC
Q 006776 258 VLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 335 (631)
Q Consensus 258 v~~t~~~~l~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~v 335 (631)
..+|.+.+...... ......+++++|++...++...- ....+++++..|+..+..... ..++.+...++..++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e--~v~a~lA~~~~Gav~vpv~~~---~~~~~l~~~l~~~~~ 193 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME--LPIAMLACARIGAVHSVVFAG---FSAESLAQRIVDCKP 193 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecCCC---CCHHHHHHHHHhcCc
Confidence 34676664332221 22235789999999888776543 345678889999988876543 478899999999999
Q ss_pred cEEeecHH
Q 006776 336 TIFYTAPT 343 (631)
Q Consensus 336 t~l~~~P~ 343 (631)
.++.+...
T Consensus 194 ~~li~~~~ 201 (666)
T PLN02654 194 KVVITCNA 201 (666)
T ss_pred eEEEEcCc
Confidence 99987654
No 259
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=28.66 E-value=5e+02 Score=26.63 Aligned_cols=69 Identities=14% Similarity=0.097 Sum_probs=42.3
Q ss_pred CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC------CCHHHHHHHHHh------cCceEEEEeCCcccCCcccc
Q 006776 108 KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG------FSSDSLAQRIMD------CKPKVVITSNAVKRGPKAIH 175 (631)
Q Consensus 108 ~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~------~~~~~l~~~l~~------~~~~~ii~~~~~~~~~~~~~ 175 (631)
++||.|.+--++.... +.++-..|+.+..++.. ...+.+...++. -++++|+++......+...+
T Consensus 88 ~~gd~Vl~~~~~h~s~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~ 164 (370)
T TIGR02539 88 KEGDWVVLDGLAHYTS---YVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD 164 (370)
T ss_pred CCCCEEEECCcccHHH---HHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC
Confidence 6899888754444322 34677888887766543 367888888864 25677776644333344445
Q ss_pred cHHH
Q 006776 176 LKDI 179 (631)
Q Consensus 176 ~~~~ 179 (631)
+..+
T Consensus 165 l~~i 168 (370)
T TIGR02539 165 AGKV 168 (370)
T ss_pred HHHH
Confidence 4443
No 260
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=28.66 E-value=5.1e+02 Score=26.19 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=42.1
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCE--EEecCC--CCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAV--HSVVFA--GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 178 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v--~v~l~~--~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~ 178 (631)
+++||.|.+..+...... ..-++-+.|+. .+++++ ....+.+...+++.++++++.+......+...++..
T Consensus 71 ~~~g~~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~ 145 (356)
T cd06451 71 LEPGDKVLVGVNGVFGDR-WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEG 145 (356)
T ss_pred CCCCCEEEEecCCchhHH-HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHH
Confidence 468999888765444321 12345566754 444443 356788888887657787776554433444455433
No 261
>PRK09265 aminotransferase AlaT; Validated
Probab=28.51 E-value=6.8e+02 Score=25.95 Aligned_cols=55 Identities=20% Similarity=0.252 Sum_probs=26.5
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC----C--CCHHHHHHHHHhcCceEEEEeC
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----G--FSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~----~--~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+++||.|++--|.... ...++...|+..+.+.. + ...+.+...+. .++++++.+.
T Consensus 116 ~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~ 176 (404)
T PRK09265 116 LNNGDEVLVPAPDYPL---WTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIIN 176 (404)
T ss_pred CCCCCEEEEeCCCCcC---hHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEEC
Confidence 4567777765554332 22223345655544322 1 23555655553 3455555443
No 262
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=28.30 E-value=6.4e+02 Score=27.35 Aligned_cols=94 Identities=17% Similarity=0.177 Sum_probs=63.0
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH--HHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~--~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++..... .+ ....+|...+...+.. .....++.++|++...+|..-. ++..+++.+..|+..+...
T Consensus 185 ~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~ 261 (547)
T PRK06087 185 HGDELAAVLFTSGTEGLPKGVMLTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD 261 (547)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC
Confidence 4466777654321 11 1345788777655433 3345678899999888775432 3456677788888877654
Q ss_pred CCCCHHHHHHHHHhcCceEEEEe
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITS 164 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~ 164 (631)
.+..+.+...+++.++.+++..
T Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~ 283 (547)
T PRK06087 262 -IFTPDACLALLEQQRCTCMLGA 283 (547)
T ss_pred -CCCHHHHHHHHHHcCCCEEecc
Confidence 5788888999999999988754
No 263
>PRK07868 acyl-CoA synthetase; Validated
Probab=28.25 E-value=4.6e+02 Score=31.37 Aligned_cols=62 Identities=19% Similarity=0.234 Sum_probs=44.2
Q ss_pred HCCCCCCCEEEEEccCChH--HHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 104 DIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 104 ~~Gv~~gd~V~i~~~n~~~--~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
..++.++|++...+|-+-. +...+++++..| ..+.+.+.+.++.+...|++.++.++.....
T Consensus 640 ~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG-~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps 703 (994)
T PRK07868 640 AAALDRRDTVYCLTPLHHESGLLVSLGGAVVGG-SRIALSRGLDPDRFVQEVRQYGVTVVSYTWA 703 (994)
T ss_pred hcCCCCCCeEEEecChHHHhHHHHHHHHHhccc-eEEEecCCCCHHHHHHHHHHhCCcEEEeHHH
Confidence 4578899999998885432 222334444444 4455566789999999999999999886643
No 264
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=28.17 E-value=93 Score=29.86 Aligned_cols=75 Identities=16% Similarity=0.130 Sum_probs=56.6
Q ss_pred HHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCC--HHHHHHHHHh-cCceEEEEeCCcccCCcccc
Q 006776 101 YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFS--SDSLAQRIMD-CKPKVVITSNAVKRGPKAIH 175 (631)
Q Consensus 101 ~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~--~~~l~~~l~~-~~~~~ii~~~~~~~~~~~~~ 175 (631)
.+.+.-.-||.-=.+.+|.+..+++.--++.-++.+-+|++|+|+ .+++...++. +.+|++|.++.....++.+.
T Consensus 101 ~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik 178 (375)
T KOG0633|consen 101 LIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIK 178 (375)
T ss_pred HHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCCCccccc
Confidence 344444567855567888898888888899999999999999875 6788888765 48999998876655554443
No 265
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=28.06 E-value=4.9e+02 Score=27.28 Aligned_cols=73 Identities=22% Similarity=0.270 Sum_probs=44.5
Q ss_pred CCCCCCEEEEEccCChHHHHHHH-HHHHhCCEEEec--CC--CCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 106 GVKKGDAVIIYLPMLMELPIAML-ACARIGAVHSVV--FA--GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 106 Gv~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l--~~--~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
.+++||+|.+..+..+.....+. .+-+.|+.+..+ ++ ....+.+...+.. +.++++.+......+...++.++
T Consensus 118 ~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~I 195 (424)
T PLN02855 118 NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE-KTKLVATHHVSNVLGSILPVEDI 195 (424)
T ss_pred cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc-CceEEEEeCccccccccCCHHHH
Confidence 35789988877766654443333 334567665544 32 2467778777754 77888777655555555565443
No 266
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=27.51 E-value=5e+02 Score=27.03 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=43.0
Q ss_pred CCCCCEEEEEccCChH-HHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHH
Q 006776 107 VKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 180 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~-~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 180 (631)
+++||.|.+-.+.-.. +.....++.+.|+.+..++.. ..+.+...+.. +.++|+.+......+...++..+.
T Consensus 95 ~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~-d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~ 167 (391)
T TIGR01328 95 LKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA-IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVC 167 (391)
T ss_pred hCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC-CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHH
Confidence 5789988775543222 222333456788887777764 56667766643 567887665544445555654443
No 267
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=27.42 E-value=4.2e+02 Score=27.36 Aligned_cols=62 Identities=11% Similarity=0.030 Sum_probs=47.3
Q ss_pred HCC-CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 104 DIG-VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 104 ~~G-v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+.| +++|....+....+-.-+.+.++|...|.-+..+-|...+..-..+++..+++++++..
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 345 67885444556666777777888899998877777776677778999999999999864
No 268
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=27.41 E-value=4.4e+02 Score=26.92 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=42.3
Q ss_pred CCCCEEEEEccCChHHHHHHH-HHHHhCCEEEecCCC----CCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 108 KKGDAVIIYLPMLMELPIAML-ACARIGAVHSVVFAG----FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 108 ~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
.+||.|.+-.+..+.....+. .+-..|+.+..++.+ ...+.+...+.+ ++++++.+......+...++.++
T Consensus 86 ~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~i 161 (373)
T cd06453 86 KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE-RTKLVAVTHVSNVLGTINPVKEI 161 (373)
T ss_pred CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC-CceEEEEeCcccccCCcCCHHHH
Confidence 378988776555444333322 334667666555432 467888888875 77888776554444555555433
No 269
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=27.36 E-value=3.8e+02 Score=24.81 Aligned_cols=116 Identities=12% Similarity=-0.042 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHhcCCCC---CcEEEEecccc--eecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEE
Q 006776 264 GYMVHTATTFKYAFDYKP---SDVYWCTADCG--WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIF 338 (631)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~---~d~~~~~~~~~--~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l 338 (631)
..+......+...+...+ ..+++..+..+ |..|....-..--..|-.++..... .+++.+.+.+.+.+++++
T Consensus 61 ~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~---~p~~~l~~~~~~~~~d~v 137 (201)
T cd02070 61 DAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRD---VPPEEFVEAVKEHKPDIL 137 (201)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCC---CCHHHHHHHHHHcCCCEE
Q ss_pred eecHHHHHHHHhcCCccccccCCCc--eeEEEEccCCCCHhHHHHH
Q 006776 339 YTAPTLVRSLMRDGNEYVTRYSRKS--LRVLGSVGEPINPSAWRWF 382 (631)
Q Consensus 339 ~~~P~~l~~l~~~~~~~~~~~~l~~--lr~v~~~Ge~l~~~~~~~~ 382 (631)
..+-++-..+.....-...-..... --.++.||.+++++..+.+
T Consensus 138 ~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 138 GLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVNQEFADEI 183 (201)
T ss_pred EEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcCCHHHHHHc
No 270
>PRK07514 malonyl-CoA synthase; Validated
Probab=27.31 E-value=3.1e+02 Score=29.38 Aligned_cols=69 Identities=13% Similarity=0.043 Sum_probs=52.4
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 349 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 349 (631)
..++.++|++....+-.. .....+++++..|+..+..+.. .....+..+++..+++.+.+.+.....+.
T Consensus 47 ~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~---~~~~~~~~~l~~~~~~~ii~~~~~~~~~~ 115 (504)
T PRK07514 47 ALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTA---YTLAELDYFIGDAEPALVVCDPANFAWLS 115 (504)
T ss_pred HcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCC---CCHHHHHHHHHhCCCcEEEEccchhHHHH
Confidence 468899999887776553 3345678889999988876543 36788889999999999988877665443
No 271
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=27.27 E-value=4.4e+02 Score=23.28 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=29.7
Q ss_pred eeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHH
Q 006776 84 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAM 127 (631)
Q Consensus 84 ~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~ 127 (631)
.-+||.|+.+.+.++|..+.+.| +-|.|.-.+..+.-+...+
T Consensus 8 ~~is~~~i~~~i~~la~~I~~~~--~~d~vvgv~~GG~~fa~~L 49 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLPAG--QWKGIIAVTRGGLVPAAIL 49 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHhhC--CCCEEEEEecCCeehHHHH
Confidence 45899999999999999998765 3466655555554444333
No 272
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=26.94 E-value=3.7e+02 Score=27.91 Aligned_cols=71 Identities=13% Similarity=0.081 Sum_probs=40.8
Q ss_pred CCCCCEEEEEccCChHHHHHHHH-HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA-~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+..+.-......+.. +-+.|+.+..++. ...+++...+.. +.++|+++......+...++..+
T Consensus 97 l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I 168 (388)
T PRK07811 97 LRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL-SDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAAL 168 (388)
T ss_pred hCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC-CCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHH
Confidence 67999987755543322222211 2235776666654 467778777754 67888876544434444454444
No 273
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=26.84 E-value=4.1e+02 Score=26.06 Aligned_cols=76 Identities=14% Similarity=0.052 Sum_probs=50.6
Q ss_pred eeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCC----CHHHHHHHHHhcCce
Q 006776 84 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGF----SSDSLAQRIMDCKPK 159 (631)
Q Consensus 84 ~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~----~~~~l~~~l~~~~~~ 159 (631)
..+-.+.+. +...+|..|++. |..|..++......... .+...|.-+..++-.. ..+++...|++.+|+
T Consensus 10 ~~iG~GHv~-Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d 82 (279)
T TIGR03590 10 SEIGLGHVM-RCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFD 82 (279)
T ss_pred ccccccHHH-HHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCC
Confidence 445555554 467889999765 44677777766554433 2357777666664322 355788999999999
Q ss_pred EEEEeCC
Q 006776 160 VVITSNA 166 (631)
Q Consensus 160 ~ii~~~~ 166 (631)
++|++..
T Consensus 83 ~vV~D~y 89 (279)
T TIGR03590 83 ILIVDHY 89 (279)
T ss_pred EEEEcCC
Confidence 9998764
No 274
>PRK15348 type III secretion system lipoprotein SsaJ; Provisional
Probab=26.68 E-value=3.5e+02 Score=26.07 Aligned_cols=70 Identities=14% Similarity=0.059 Sum_probs=43.0
Q ss_pred hHHHHHHHhcCcccceEEEEee-ecCCC---CeeE--EEEEEeCCCCCCcHHHHHHHHHHHHhhcCCCccCceEEECC
Q 006776 513 TAEVESALVSHPQCAEAAVVGV-EHEVK---GQGI--YAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP 584 (631)
Q Consensus 513 ~~eIE~~l~~~~~V~~~~vv~~-~~~~~---~~~~--~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~v~ 584 (631)
-.|+|+.|.++++|.+|-|.-. |.... .+.+ -+++.++++.+.+ .....|+..+...++. ..|..|-+++
T Consensus 109 egELarTI~~idgV~~ArVhL~lP~~~~~~~~~~asASV~I~~~~~~~~~-~~~v~I~~LVA~SV~g-L~~enVTVvd 184 (249)
T PRK15348 109 EQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNME-AFRVKIKDLIEMSIPG-LQYSKISILM 184 (249)
T ss_pred HHHHHHHHHhCCCeeEeEEEEECCCCCcccCCCCccEEEEEEeCCCCChH-HHHHHHHHHHHHhcCC-CCccceEEEe
Confidence 3789999999999999988443 43221 1122 3444455554333 2222788888888763 4566666554
No 275
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=26.62 E-value=4.2e+02 Score=27.43 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=40.5
Q ss_pred HHHHCCCCCCCEEEEEccCChHHHHHHH--HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHH
Q 006776 101 YLKDIGVKKGDAVIIYLPMLMELPIAML--ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 178 (631)
Q Consensus 101 ~L~~~Gv~~gd~V~i~~~n~~~~~v~~l--A~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~ 178 (631)
.|..+ +++||.|.+.-+.-..+ ..++ .+-+.|+.+..+++... +.+...+. -+.++|++..-....+...++..
T Consensus 81 al~al-l~~GD~Vl~~~~~y~~t-~~~~~~~~~~~gi~v~~~d~~~~-e~l~~~i~-~~tklV~lesp~Np~g~~~dl~~ 156 (377)
T TIGR01324 81 SILAF-VKAGDHVLMVDSAYEPT-RYFCDIVLKRMGVDITYYDPLIG-EDIATLIQ-PNTKVLFLEAPSSITFEIQDIPA 156 (377)
T ss_pred HHHHh-cCCCCEEEEcCCCcHHH-HHHHHHHHHhcCcEEEEECCCCH-HHHHHhcC-CCceEEEEECCCCCCCcHHHHHH
Confidence 34444 68899887654433222 2222 23456777766665432 56666654 35778887654433344444433
Q ss_pred H
Q 006776 179 I 179 (631)
Q Consensus 179 ~ 179 (631)
+
T Consensus 157 I 157 (377)
T TIGR01324 157 I 157 (377)
T ss_pred H
Confidence 3
No 276
>PRK10717 cysteine synthase A; Provisional
Probab=26.62 E-value=4.5e+02 Score=26.53 Aligned_cols=63 Identities=16% Similarity=0.091 Sum_probs=45.5
Q ss_pred HHCC-CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 103 KDIG-VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 103 ~~~G-v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.+.| +++|+.|.. ...+-....+-++|.++|.-+..+-|.-.++....+++..+++++++...
T Consensus 56 ~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 56 EKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 3445 467777655 44555666677788889977776666556677789999999999988753
No 277
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=26.60 E-value=3.5e+02 Score=29.58 Aligned_cols=90 Identities=10% Similarity=-0.031 Sum_probs=64.1
Q ss_pred eEEEcCchHHHHHHHHHHH--h--cCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHH
Q 006776 257 GVLHTTGGYMVHTATTFKY--A--FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDK 332 (631)
Q Consensus 257 ~v~~t~~~~l~~~~~~~~~--~--~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~ 332 (631)
|..+|+..+...+...... . .+++.+|++...+|-...+. ...+++++.|+.+.-... . .+...+...++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np--~-~~~~ei~~~~~~ 117 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNP--R-LTASEIAKQLKD 117 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCccccccCc--c-cCHHHHHHHHHh
Confidence 6778888754444332222 2 23788999999988776553 446788888887665543 3 488999999999
Q ss_pred hCCcEEeecHHHHHHHHhc
Q 006776 333 YKVTIFYTAPTLVRSLMRD 351 (631)
Q Consensus 333 ~~vt~l~~~P~~l~~l~~~ 351 (631)
-+++++++....+..+...
T Consensus 118 s~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 118 SKPKLIFVDEDFYDKISEA 136 (537)
T ss_pred cCCeEEEEcCchHHHHHHH
Confidence 9999999987777766544
No 278
>PLN00175 aminotransferase family protein; Provisional
Probab=26.54 E-value=5.1e+02 Score=27.11 Aligned_cols=62 Identities=19% Similarity=0.303 Sum_probs=32.8
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC-----CCCHHHHHHHHHhcCceEEEEeCCcccCCc
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA-----GFSSDSLAQRIMDCKPKVVITSNAVKRGPK 172 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~-----~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 172 (631)
+.+||.|++.-|.-..+ .-++...|+.+++++. ....+.+...+.. +.++++........+.
T Consensus 136 ~~~gd~Vlv~~P~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~ 202 (413)
T PLN00175 136 INPGDEVILFAPFYDSY---EATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS-KTRAILINTPHNPTGK 202 (413)
T ss_pred CCCCCEEEEeCCCchhH---HHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc-CceEEEecCCCCCCCc
Confidence 46788877776544333 2334455665554432 2345666666643 5666666543333333
No 279
>PRK07867 acyl-CoA synthetase; Validated
Probab=26.48 E-value=7.3e+02 Score=26.87 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=59.6
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH--HHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~--~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.++++..... .+ ....+|+..+...+..+ ....|++++|++...+|-.-. .+..+++.+..|+..+ +.
T Consensus 150 ~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~---~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~-~~ 225 (529)
T PRK07867 150 DPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVML---AQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIA-LR 225 (529)
T ss_pred CccceEEEEECCCCCCCCcEEEecHHHHHHHHHHH---HHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEE-ec
Confidence 4567777654321 11 24567888876554443 334578899998887775432 2233444556676544 44
Q ss_pred CCCCHHHHHHHHHhcCceEEEEe
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITS 164 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~ 164 (631)
+.+.++.+...+++.++.++...
T Consensus 226 ~~~~~~~~~~~i~~~~vt~~~~~ 248 (529)
T PRK07867 226 RKFSASGFLPDVRRYGATYANYV 248 (529)
T ss_pred CCCCHHHHHHHHHHhCCeEEecc
Confidence 56888999999999999888654
No 280
>PRK12414 putative aminotransferase; Provisional
Probab=26.46 E-value=7.2e+02 Score=25.56 Aligned_cols=55 Identities=22% Similarity=0.280 Sum_probs=26.6
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC---C--CCHHHHHHHHHhcCceEEEEeC
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA---G--FSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~---~--~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+.+||.|++..|.-.. ..-++...|+.+++++. + ...+.+...++ .++++++.+.
T Consensus 111 ~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~ 170 (384)
T PRK12414 111 VHPGDEVIYFEPSFDS---YAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNT 170 (384)
T ss_pred cCCCCEEEEeCCCccc---hHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-cccEEEEEcC
Confidence 4567777666554322 12223334554444332 1 34566665554 2566666553
No 281
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=26.45 E-value=5.6e+02 Score=27.70 Aligned_cols=93 Identities=17% Similarity=0.146 Sum_probs=60.3
Q ss_pred CCCeeEEEEEcCC-C--CceeeecHHHHHHHHHHHHHHHHHCCCC-CCCEEEEEccCCh-HHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-P--GVDATLTYSQLLQQVCQLANYLKDIGVK-KGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~--~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~-~gd~V~i~~~n~~-~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++..... . -....+|++.+...+..++. ..++. ++|++...+|-.- ..+..+++++..|+..+...
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNA---RVGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHH---HhCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 3466776644321 1 12456899888776665443 35677 8999988887542 22345677888888876654
Q ss_pred C-CC--CHHHHHHHHHhcCceEEE
Q 006776 142 A-GF--SSDSLAQRIMDCKPKVVI 162 (631)
Q Consensus 142 ~-~~--~~~~l~~~l~~~~~~~ii 162 (631)
. .+ .+..+...+++.++.++.
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~ 250 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTA 250 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEe
Confidence 3 23 456788889999988664
No 282
>KOG3055 consensus Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=26.39 E-value=3.6e+02 Score=24.50 Aligned_cols=67 Identities=25% Similarity=0.259 Sum_probs=46.6
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 95 VCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 95 v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+.-.|...+..|+. |.+|..+.||+-+.....|-.+--| .-+..+...+.....|+.-..++|+|+-
T Consensus 46 ssyYAklYK~~~l~-G~HVImLGPn~~~AA~~ALh~~Pg~---LQvGGGIN~~Nc~~wl~egASkVIVTSw 112 (263)
T KOG3055|consen 46 SSYYAKLYKEDGLT-GGHVIMLGPNSQAAAIGALHAYPGG---LQVGGGINSENCMSWLEEGASKVIVTSW 112 (263)
T ss_pred hHHHHHHHhhcCCC-cceEEEECCCcHHHHHHHHHhCCCc---eeecCccChHHHHHHHHhcCceEEEEEE
Confidence 33445556666775 7789999999988776555433222 3345667788888999998888888763
No 283
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=26.39 E-value=2.6e+02 Score=27.07 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=47.7
Q ss_pred CceEEEccCCeEEEEeecCCeEecCceeechHHHHHHH---------hcCcccceEEEEeeecCCCCeeEEEEEEeCCCC
Q 006776 483 GDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESAL---------VSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV 553 (631)
Q Consensus 483 GDl~~~~~dG~l~i~GR~dd~i~~~G~~i~~~eIE~~l---------~~~~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~ 553 (631)
|...|.++||.+.|.|..=| .+|.++.-..+++.. .+++. .+.+++|.+ +....++|-.++..
T Consensus 58 ~~i~Y~t~dg~y~i~G~l~d---~~~~nlT~~~~~~~~~~~~~~~~~~~l~~-~~~i~~g~~----~ak~~I~vFtDp~C 129 (251)
T PRK11657 58 GVTIYLTPDGKHAISGYMYD---EKGENLSEALLEKEVYAPMGREMWQRLEQ-SHWILDGKA----DAPRIVYVFADPNC 129 (251)
T ss_pred ceEEEEcCCCCEEEEEEEEc---CCCCccCHHHHHHHhcCCccHHHHHHhhc-cCCccccCC----CCCeEEEEEECCCC
Confidence 44567789999999987644 457778777777642 22221 233444422 23355566667777
Q ss_pred CCcHHHHHHHHHHHHh
Q 006776 554 PYSEELRKSLVLAVRK 569 (631)
Q Consensus 554 ~~~~~~~~~i~~~~~~ 569 (631)
.....+.+++..++..
T Consensus 130 pyC~kl~~~l~~~~~~ 145 (251)
T PRK11657 130 PYCKQFWQQARPWVDS 145 (251)
T ss_pred hhHHHHHHHHHHHhhc
Confidence 7766666666666543
No 284
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=26.24 E-value=4.9e+02 Score=25.03 Aligned_cols=13 Identities=31% Similarity=0.179 Sum_probs=9.5
Q ss_pred CCCeEEEeCCCCC
Q 006776 240 EDPLFLLYTSGST 252 (631)
Q Consensus 240 ~~~~~i~~TSGTT 252 (631)
..+-.|+|||+++
T Consensus 181 ~~~d~v~ftS~~~ 193 (255)
T PRK05752 181 ERLNGLVVSSGQG 193 (255)
T ss_pred CCCCEEEECCHHH
Confidence 4566788888775
No 285
>PLN00011 cysteine synthase
Probab=26.21 E-value=5e+02 Score=26.17 Aligned_cols=64 Identities=16% Similarity=-0.005 Sum_probs=46.4
Q ss_pred HHHCC-CCCC-CEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 102 LKDIG-VKKG-DAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 102 L~~~G-v~~g-d~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+.| +.+| +.|.. ...+-....+-++|..+|.-+..+-|.-.+.....+++..+++++++.+.
T Consensus 59 a~~~g~~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 59 AEDKGLITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHcCCCCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33444 6777 55554 55566666777788889987777766555677788999999999998753
No 286
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.17 E-value=3e+02 Score=21.03 Aligned_cols=67 Identities=12% Similarity=0.130 Sum_probs=51.4
Q ss_pred eeecHHHHHHHHHHHHHH---HHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceE
Q 006776 84 ATLTYSQLLQQVCQLANY---LKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKV 160 (631)
Q Consensus 84 ~~~Ty~eL~~~v~~~A~~---L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ 160 (631)
...||.||.+.-..++.. |.+..++..|-|+|+--++-... -++.+....+.+++..-+++.++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~Sy-----------~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSSY-----------YVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCceeE-----------EEEEEeccCCHHHHHHHHHHhCchh
Confidence 357999999988777654 55557888999999987765432 3466778889999999999988876
Q ss_pred E
Q 006776 161 V 161 (631)
Q Consensus 161 i 161 (631)
=
T Consensus 77 n 77 (88)
T COG4009 77 N 77 (88)
T ss_pred c
Confidence 3
No 287
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.10 E-value=3.3e+02 Score=29.18 Aligned_cols=68 Identities=13% Similarity=0.030 Sum_probs=51.7
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 348 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 348 (631)
..++++++++....+-+.-. ...+++++..|+..+..+.. ...+.+..++++.+++.+++.+.....+
T Consensus 30 ~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~---~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 97 (502)
T PRK08276 30 ALGLREGDVVAILLENNPEF--FEVYWAARRSGLYYTPINWH---LTAAEIAYIVDDSGAKVLIVSAALADTA 97 (502)
T ss_pred HhCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccc---cCHHHHHHHHhcCCCCEEEEccchhhHH
Confidence 46889999998887766433 35578888899988876543 3678888999999999998887766554
No 288
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=26.04 E-value=1.1e+02 Score=30.81 Aligned_cols=52 Identities=15% Similarity=0.255 Sum_probs=41.8
Q ss_pred eecHHHHHHH------HHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCE
Q 006776 85 TLTYSQLLQQ------VCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAV 136 (631)
Q Consensus 85 ~~Ty~eL~~~------v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v 136 (631)
.+.|.++... ...+...+.++|+.+++.|.+|+.++.....+++++..+|.-
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667666432 466777788899999999999999999888888999889864
No 289
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=25.92 E-value=4.3e+02 Score=28.11 Aligned_cols=62 Identities=19% Similarity=0.070 Sum_probs=46.0
Q ss_pred HHCCC-CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 103 KDIGV-KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 103 ~~~Gv-~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
.+.|. ++|+.|.-. ..+-.-..+.++|.+.|.-+..+-|...+..-...++..+++++++..
T Consensus 54 ~~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 54 EASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 34454 678776554 556677777789999998877776655556677889999999999864
No 290
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=25.77 E-value=4.3e+02 Score=26.51 Aligned_cols=61 Identities=15% Similarity=0.138 Sum_probs=45.1
Q ss_pred HCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 104 DIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 104 ~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+.|..+++.|.... .+-.-..+.++|.+.|.-++.+-|...+.....+++..+++++++..
T Consensus 45 ~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 45 KQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred HhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 33434566666655 45666677788889998877777766667778999999999998764
No 291
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=25.45 E-value=3.9e+02 Score=27.17 Aligned_cols=65 Identities=14% Similarity=0.155 Sum_probs=37.7
Q ss_pred CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC----CCCHHHHHHHHHhcCceEEEEeCCcccCCcccc
Q 006776 108 KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIH 175 (631)
Q Consensus 108 ~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~----~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 175 (631)
++||.|++-.|.-. ....++...|+.+++++. ....+.+...+...++++++.+......+...+
T Consensus 103 ~~gd~vlv~~P~y~---~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 103 KPGATVLAPEPGFV---MYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred CCCCEEEECCCCHH---HHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 57888777766433 233456667776665532 245677777776667777776644333334433
No 292
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=25.43 E-value=5.6e+02 Score=26.75 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=42.6
Q ss_pred CCCCCEEEEEccCChHHHHHHH-HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAML-ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+..+.-....-.+- .+.+.|+.+..++. ...+.+...|+. +.++|+++......+...++..+
T Consensus 100 l~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~-~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I 171 (398)
T PRK08249 100 LKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET-GDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERL 171 (398)
T ss_pred cCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-CCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHH
Confidence 5789988776554333222222 24567877666654 567778777754 67788875544445555665443
No 293
>PLN02574 4-coumarate--CoA ligase-like
Probab=25.39 E-value=3.4e+02 Score=29.68 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=51.8
Q ss_pred cCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHHH
Q 006776 277 FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 349 (631)
Q Consensus 277 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 349 (631)
.+++++|++....+-... ....+++++..|+..+..... ...+.+..++++.++..+++.+..+..+.
T Consensus 87 ~G~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~p~---~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 87 MGVRQGDVVLLLLPNSVY--FPVIFLAVLSLGGIVTTMNPS---SSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred hCCCCCCEEEEECCCcch--HHHHHHHHHHhCeEEeCcCcc---cCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 689999999888765532 345678888899988876543 36778889999999999988887666554
No 294
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=25.37 E-value=7.1e+02 Score=25.12 Aligned_cols=77 Identities=18% Similarity=0.147 Sum_probs=40.2
Q ss_pred HHHCCCCCC-CEEEEEccCChHHHHHHHHHHHhCCEEEecCCC----CCHHHHHHHHHhcCceEEEEeCCcccCCccccc
Q 006776 102 LKDIGVKKG-DAVIIYLPMLMELPIAMLACARIGAVHSVVFAG----FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHL 176 (631)
Q Consensus 102 L~~~Gv~~g-d~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 176 (631)
|...+-++| +.|.+.....+.....+..+...|+.++.++.. ...+.+...++. +.++++.+......+...++
T Consensus 79 l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~~~~ 157 (353)
T TIGR03235 79 LARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRP-DTLLVSIMHVNNETGSIQPI 157 (353)
T ss_pred HHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCC-CCEEEEEEcccCCceeccCH
Confidence 333344566 555554444444444444444567666555432 456777777653 56677665544444444554
Q ss_pred HHH
Q 006776 177 KDI 179 (631)
Q Consensus 177 ~~~ 179 (631)
+++
T Consensus 158 ~~I 160 (353)
T TIGR03235 158 REI 160 (353)
T ss_pred HHH
Confidence 333
No 295
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=25.33 E-value=6e+02 Score=26.53 Aligned_cols=73 Identities=8% Similarity=0.080 Sum_probs=42.9
Q ss_pred CCCCCEEEEEccCC-hHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHH
Q 006776 107 VKKGDAVIIYLPML-MELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVD 181 (631)
Q Consensus 107 v~~gd~V~i~~~n~-~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 181 (631)
+++||.|.+-.... ..+....-.+.+.|+.+..++. ...+.+...+.. +.++|++.......+...++..+..
T Consensus 106 l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~-~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~ 179 (403)
T PRK07810 106 LGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG-EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSE 179 (403)
T ss_pred hCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC-CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHH
Confidence 57899877653211 2222223335567888887765 366777777754 5677877655544555556554433
No 296
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=25.29 E-value=5.6e+02 Score=25.51 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=50.9
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChH----------------------------HHHHHHHHHHhCCEEE
Q 006776 87 TYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME----------------------------LPIAMLACARIGAVHS 138 (631)
Q Consensus 87 Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~----------------------------~~v~~lA~~~~G~v~v 138 (631)
...++.+....+...+++.|+. ..|.|..-++-. ..+..+||++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 3455556677888889998876 366665544322 3455678999999999
Q ss_pred ecCCCCCH--HHHHHHHHhcCceEEEEeCC
Q 006776 139 VVFAGFSS--DSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 139 ~l~~~~~~--~~l~~~l~~~~~~~ii~~~~ 166 (631)
-..|.... ..+..+.++.+. .+..++
T Consensus 205 N~tP~~~a~~P~l~ela~~~gv--pi~GdD 232 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGV--PIAGDD 232 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTE--EEEESS
T ss_pred eccCccccCCHHHHHHHHHcCC--Ceecch
Confidence 88887765 889999998765 344444
No 297
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=25.25 E-value=5.8e+02 Score=25.18 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=44.6
Q ss_pred HCC-CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 104 DIG-VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 104 ~~G-v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+.| +.+|+.|.. ...+-.-..+-++|.+.|.-+..+-|...+..-...++..+++++++..
T Consensus 52 ~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 52 KRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 345 477887655 4455566666778888998777776666556677889999999999865
No 298
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=25.24 E-value=8.1e+02 Score=25.68 Aligned_cols=87 Identities=22% Similarity=0.165 Sum_probs=51.5
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHH-hCCEEEecCC----CCCHHHHHHHHHhcCceEEEEeCCccc
Q 006776 95 VCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR-IGAVHSVVFA----GFSSDSLAQRIMDCKPKVVITSNAVKR 169 (631)
Q Consensus 95 v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~-~G~v~v~l~~----~~~~~~l~~~l~~~~~~~ii~~~~~~~ 169 (631)
.+.+|..|... +++||.|.+---....-++.+..+.+ .|+....+.. .+..+.+...+ .-+.|++..+....-
T Consensus 97 ln~va~~l~~~-~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i-~~~Tklvais~vSn~ 174 (405)
T COG0520 97 LNLVARGLGRS-LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLI-TPKTKLVALSHVSNV 174 (405)
T ss_pred HHHHHHHhhhh-hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhc-CCCceEEEEECcccc
Confidence 44455555433 78899988888777666666666665 5865444432 24456666633 344567777665555
Q ss_pred CCcccccHHHHHHH
Q 006776 170 GPKAIHLKDIVDAA 183 (631)
Q Consensus 170 ~~~~~~~~~~~~~~ 183 (631)
.+...+++++.+.+
T Consensus 175 tG~~~pv~~I~~la 188 (405)
T COG0520 175 TGTVNPVKEIAELA 188 (405)
T ss_pred ccccchHHHHHHHH
Confidence 55555665554443
No 299
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.24 E-value=3.6e+02 Score=29.27 Aligned_cols=98 Identities=14% Similarity=0.079 Sum_probs=63.1
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHH-HHCCCCCCCEEEEEccCChH-HHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYL-KDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L-~~~Gv~~gd~V~i~~~n~~~-~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.++++..... .+ ....+|...+.... .+..+ ...++.++|++..++|-.-. ....+++++..|+..+...
T Consensus 174 ~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~ 251 (539)
T PRK07008 174 DENQASSLCYTSGTTGNPKGALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPG 251 (539)
T ss_pred CcccceEEEECCCCCCCCcEEEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEec
Confidence 3455665543321 11 23457766654322 22233 24678899999888874322 2333467788998887777
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+.++.+...+++.++..+.....
T Consensus 252 ~~~~~~~~~~~l~~~~vt~~~~~P~ 276 (539)
T PRK07008 252 PDLDGKSLYELIEAERVTFSAGVPT 276 (539)
T ss_pred CCcCHHHHHHHHHHcCCEEEEechH
Confidence 7788999999999999999876654
No 300
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=25.14 E-value=1.3e+02 Score=30.47 Aligned_cols=61 Identities=21% Similarity=0.033 Sum_probs=45.5
Q ss_pred HHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 101 YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 101 ~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
.|+..++++|++|+|+.--..-.+...+|-+. |+-++.++.+- +-....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 45678999999999999889988888888764 47777776533 333446667788888754
No 301
>PRK14012 cysteine desulfurase; Provisional
Probab=25.08 E-value=6.7e+02 Score=26.00 Aligned_cols=69 Identities=13% Similarity=0.025 Sum_probs=39.9
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC--C--CCHHHHHHHHHhcCceEEEEeCCcccCCccccc
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA--G--FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHL 176 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~--~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 176 (631)
.++||.|.+--...+.......++.+.|+.++.++. + ...+.+...|.. +.++++.+......+...++
T Consensus 91 ~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~tG~~~~~ 163 (404)
T PRK14012 91 QKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRD-DTILVSIMHVNNEIGVIQDI 163 (404)
T ss_pred cCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCC-CCEEEEEECcCCCccchhhH
Confidence 468998877655444444444444456876655543 2 467888887753 56666665544334444444
No 302
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=25.06 E-value=9e+02 Score=26.20 Aligned_cols=12 Identities=42% Similarity=0.609 Sum_probs=5.8
Q ss_pred CCCCEEEEEccC
Q 006776 108 KKGDAVIIYLPM 119 (631)
Q Consensus 108 ~~gd~V~i~~~n 119 (631)
++||.|++-.|.
T Consensus 230 ~~Gd~Vli~~P~ 241 (517)
T PRK13355 230 DDGDEVLIPSPD 241 (517)
T ss_pred CCCCEEEEcCCC
Confidence 345555554443
No 303
>PRK13391 acyl-CoA synthetase; Provisional
Probab=25.06 E-value=4.7e+02 Score=28.04 Aligned_cols=99 Identities=11% Similarity=0.071 Sum_probs=63.4
Q ss_pred CCCCCeEEEeCCCCCCCCceEEEcCchHHHHHHH--HHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEec
Q 006776 238 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 315 (631)
Q Consensus 238 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~l~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~ 315 (631)
.++.++.+...+| + .+|...+...... ......++.+++++....+-..-. ...+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-----~--~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-----E--VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-----C--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEeccc
Confidence 3566776654432 2 2555553322211 112245888999987776665433 345678888899888765
Q ss_pred CCCCCCChhHHHHHHHHhCCcEEeecHHHHHHH
Q 006776 316 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 348 (631)
Q Consensus 316 ~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 348 (631)
.. .+.+.+..++++.++..+.+.+.....+
T Consensus 81 ~~---~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 81 SH---LTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred cc---cCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 43 3678889999999999998887655443
No 304
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.00 E-value=3.1e+02 Score=27.59 Aligned_cols=62 Identities=21% Similarity=0.062 Sum_probs=49.5
Q ss_pred HHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 101 YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 101 ~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
.|++.|+++|.+|+|..--..-.+...+|.++ |.-++.++... ..-...++..+++..+...
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~ 234 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDST 234 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEec
Confidence 46788999999999999988999999999874 67777777644 2334668888999888765
No 305
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=24.77 E-value=8.1e+02 Score=26.45 Aligned_cols=96 Identities=15% Similarity=0.179 Sum_probs=64.4
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCh--HHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~--~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|++..... .+ ....+|.+.+...+.... ...+++.+|++...+|-.- .++..++..+..|+..+. .
T Consensus 193 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~-~ 268 (538)
T TIGR03208 193 SPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL-Q 268 (538)
T ss_pred CCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe-c
Confidence 4567776654322 11 234678777765544333 3457889999999988653 344556777778876554 4
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+.++.+...+++.++.++.+...
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~ 293 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTP 293 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHH
Confidence 5678899999999999999876543
No 306
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=24.48 E-value=7.1e+02 Score=30.23 Aligned_cols=97 Identities=18% Similarity=0.189 Sum_probs=65.5
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--hHHHHHHHHHHHhCCEEEecC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 141 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~--~~~~v~~lA~~~~G~v~v~l~ 141 (631)
.++.+|.+..... .+ ....+|.+.+...+...+. ..+++++|++...+|-. ..+...++..+..|+..+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4567776654321 11 2346888888666655443 45788999999888853 223345667778888877666
Q ss_pred CCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 142 AGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 142 ~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
.....+.+...+++.++.++...+.
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~ 892 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDT 892 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHH
Confidence 5556677888899999998887653
No 307
>PRK06839 acyl-CoA synthetase; Validated
Probab=24.44 E-value=3.9e+02 Score=28.47 Aligned_cols=87 Identities=7% Similarity=-0.051 Sum_probs=58.8
Q ss_pred EEEcCchHHHHHHH---HHHHhcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhC
Q 006776 258 VLHTTGGYMVHTAT---TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 334 (631)
Q Consensus 258 v~~t~~~~l~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~ 334 (631)
..+|...+...... .+....++.+++++...++-... ....+++++..|+..+..+.. .+++.+...+++.+
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~---~~~~~~~~~l~~~~ 100 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIR---LTENELIFQLKDSG 100 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcc---cCHHHHHHHHHhcC
Confidence 34566664332222 22223578899998877765533 345678888899988877643 36778888999999
Q ss_pred CcEEeecHHHHHHHH
Q 006776 335 VTIFYTAPTLVRSLM 349 (631)
Q Consensus 335 vt~l~~~P~~l~~l~ 349 (631)
++.+++.+.....+.
T Consensus 101 ~~~i~~~~~~~~~~~ 115 (496)
T PRK06839 101 TTVLFVEKTFQNMAL 115 (496)
T ss_pred ceEEEEcHHHHHHHH
Confidence 999998887765543
No 308
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=24.37 E-value=6.3e+02 Score=26.12 Aligned_cols=73 Identities=19% Similarity=0.218 Sum_probs=41.7
Q ss_pred CCCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCC----CCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 106 GVKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFA----GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 106 Gv~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~----~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
.+++||.|.+.-+..+-....+ .++...|+.+..+.. ....+.+...+.. ++++++.+......+...++.++
T Consensus 104 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~-~~~lv~~~~~~~~tG~~~~~~~i 181 (403)
T TIGR01979 104 NLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTE-KTKLVAITHVSNVLGTVNPVEEI 181 (403)
T ss_pred cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhcc-CCeEEEEEcccccccccCCHHHH
Confidence 4578898777665554433333 344567766544432 2456777777753 57777666544444555555443
No 309
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=24.12 E-value=1.3e+02 Score=29.65 Aligned_cols=53 Identities=15% Similarity=0.187 Sum_probs=42.6
Q ss_pred eeecHHHHHH-----HHHHHHHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCE
Q 006776 84 ATLTYSQLLQ-----QVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAV 136 (631)
Q Consensus 84 ~~~Ty~eL~~-----~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v 136 (631)
..+.|.++.. ....+...|.+.|+.+++.|.+++.++.....+++++..+|.-
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3577777753 2456667778889999999999999999999999999888864
No 310
>PRK10595 SOS cell division inhibitor; Provisional
Probab=24.04 E-value=3e+02 Score=24.59 Aligned_cols=50 Identities=14% Similarity=0.112 Sum_probs=33.5
Q ss_pred HHHHHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecC--C-CCCHHH
Q 006776 99 ANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--A-GFSSDS 148 (631)
Q Consensus 99 A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~--~-~~~~~~ 148 (631)
+.+|.+.|+.....+.|.-.+..+.+-++-=|++.|...+.+. | ....+.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~ 122 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEE 122 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHH
Confidence 5678888888766666666677788888888888885444433 3 444444
No 311
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=24.00 E-value=6.4e+02 Score=26.47 Aligned_cols=69 Identities=12% Similarity=0.100 Sum_probs=39.1
Q ss_pred CCCCCEEEEEccCChHHHHH-HHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccH
Q 006776 107 VKKGDAVIIYLPMLMELPIA-MLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLK 177 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~-~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~ 177 (631)
+++||+|.+..+.-...... .-.+-+.|+.++.++.. ..+.+...+.. +.++|++.......+...++.
T Consensus 93 ~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~-d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~ 162 (418)
T TIGR01326 93 AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD-DPEEFEKAIDE-NTKAVFAETIGNPAINVPDIE 162 (418)
T ss_pred hCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC-CHHHHHHhcCc-CCeEEEEECCCCCCCeecCHH
Confidence 56899886654322222222 22345678877777653 56777777653 567777764433334444543
No 312
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.99 E-value=3.5e+02 Score=29.63 Aligned_cols=68 Identities=13% Similarity=0.017 Sum_probs=52.1
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 348 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 348 (631)
..+++++|++....+-..- ....+++++..|+..+..... ...+.+...+.+.+++.+++.+..+..+
T Consensus 76 ~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 76 ALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNPL---YTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred HhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCcC---CCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 4678999998887665543 245678888899988876543 3788899999999999999887765554
No 313
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=23.96 E-value=3.2e+02 Score=29.84 Aligned_cols=68 Identities=10% Similarity=0.029 Sum_probs=50.7
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 348 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 348 (631)
..++++++++...++-..- ....+++++..|+..+..... .....+...+.+.+++.+.+.......+
T Consensus 70 ~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~p~---~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 137 (560)
T PRK08751 70 ELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNVNPL---YTPRELKHQLIDSGASVLVVIDNFGTTV 137 (560)
T ss_pred HhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEeccCcc---CCHHHHHHHHHhcCCeEEEEcchhHHHH
Confidence 4689999998887665533 345678889999998876543 3667888999999999998876655443
No 314
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=23.90 E-value=7.7e+02 Score=25.01 Aligned_cols=68 Identities=19% Similarity=0.234 Sum_probs=42.5
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC---CCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA---GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 178 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~ 178 (631)
+++||.|++-.|.. .....++...|+.+++++. ....+.+...+. -++++++.+......+...+..+
T Consensus 105 ~~~gd~vl~~~p~y---~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~ 175 (367)
T PRK02731 105 LGPGDEVIYSEHGF---AVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVT-PRTRLVFIANPNNPTGTYLPAEE 175 (367)
T ss_pred cCCCCEEEEecCCH---HHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhC-CCCcEEEEeCCCCCCCcCCCHHH
Confidence 46789888876653 3334445678887776643 345677777765 36787777655444555555443
No 315
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=23.78 E-value=4.3e+02 Score=26.53 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=41.2
Q ss_pred CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhc----CceEEEEeCCcccCCcccccHH
Q 006776 108 KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDC----KPKVVITSNAVKRGPKAIHLKD 178 (631)
Q Consensus 108 ~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~----~~~~ii~~~~~~~~~~~~~~~~ 178 (631)
++||.|.+-- +++.....++...|+.++.+. ....+.+...++.. +++++++.......+...++++
T Consensus 83 ~~gd~Vl~~~---~~~~~~~~~~~~~g~~~~~~~-~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~ 153 (349)
T cd06454 83 GKGDLIISDS---LNHASIIDGIRLSGAKKRIFK-HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPE 153 (349)
T ss_pred CCCCEEEEeh---hhhHHHHHHHHHcCCceEEec-CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHH
Confidence 6899887743 344444556777898777664 35667888888763 4666666544333343444433
No 316
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=23.78 E-value=5.5e+02 Score=26.67 Aligned_cols=75 Identities=17% Similarity=0.257 Sum_probs=42.9
Q ss_pred CCCCCCEEEEEccCChHHHHHHH-HHHHhCCEEEec--CCC--CCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHH
Q 006776 106 GVKKGDAVIIYLPMLMELPIAML-ACARIGAVHSVV--FAG--FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 180 (631)
Q Consensus 106 Gv~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l--~~~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 180 (631)
.+++||.|.+.-+..+-.+..+. .+-+.|+-+..+ +++ ...+.+...+.. +.++++.+......+...+++.+.
T Consensus 109 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~t~lv~l~~~~n~tG~~~~~~~i~ 187 (406)
T PRK09295 109 NVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDE-RTRLLAITHVSNVLGTENPLAEMI 187 (406)
T ss_pred cCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCC-CcEEEEEecchhcccccCCHHHHH
Confidence 46789988777654433333333 334567654444 332 457778777754 567777665555555556654443
Q ss_pred H
Q 006776 181 D 181 (631)
Q Consensus 181 ~ 181 (631)
+
T Consensus 188 ~ 188 (406)
T PRK09295 188 A 188 (406)
T ss_pred H
Confidence 3
No 317
>COG1424 BioW Pimeloyl-CoA synthetase [Coenzyme metabolism]
Probab=23.57 E-value=91 Score=28.24 Aligned_cols=49 Identities=14% Similarity=0.122 Sum_probs=33.1
Q ss_pred CCcceeEEEecCCCcccccccCCchhhhhhccccCCCeEecCceEEEcc--CCeEEEEeecC
Q 006776 442 GECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDK--DGYHWLTGRVD 501 (631)
Q Consensus 442 ~g~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~~~--dG~l~i~GR~d 501 (631)
+|..+|||..-. |....||+.... -||.|--|+-.... .|+++|+.+.-
T Consensus 168 p~VvaELC~SDd-~dY~TGYvagkk----------iGY~Rit~lKe~gt~~GgRVfFVd~~~ 218 (239)
T COG1424 168 PGVVAELCWSDD-PDYTTGYVAGKK----------IGYHRITDLKEVGTRYGGRVFFVDDCI 218 (239)
T ss_pred cceeEEEeecCC-Ccceeeeeecce----------eeeEEeecccccCCccCcEEEEEcCcc
Confidence 466799988653 777777764321 46777777766654 47888887753
No 318
>PLN03102 acyl-activating enzyme; Provisional
Probab=23.55 E-value=3.3e+02 Score=30.00 Aligned_cols=68 Identities=13% Similarity=0.082 Sum_probs=51.0
Q ss_pred hcCCCCCcEEEEecccceecchhHHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhCCcEEeecHHHHHHH
Q 006776 276 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 348 (631)
Q Consensus 276 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 348 (631)
..+++++|++...++-.- .....+++++..|+.++..... .+.+.+..+++..+++++.+.+.....+
T Consensus 58 ~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (579)
T PLN03102 58 SLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTR---LDATSIAAILRHAKPKILFVDRSFEPLA 125 (579)
T ss_pred HcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeecccc---CCHHHHHHHHhccCCeEEEEChhhHHHH
Confidence 468899999887776543 2345678888899988876543 4788999999999999999876554433
No 319
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=23.38 E-value=4.3e+02 Score=27.67 Aligned_cols=57 Identities=16% Similarity=0.067 Sum_probs=47.7
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEec--CCCCCHHHHHHHHHhcCceEEEE
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV--FAGFSSDSLAQRIMDCKPKVVIT 163 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l--~~~~~~~~l~~~l~~~~~~~ii~ 163 (631)
-=+|-+|+++++-.++..+.+..+...||-+... ||....+.+...|...+..++-.
T Consensus 29 pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~ 87 (406)
T TIGR00936 29 PLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAW 87 (406)
T ss_pred CCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEe
Confidence 3468999999999999999999999999865544 78778899999999888886543
No 320
>PRK06348 aspartate aminotransferase; Provisional
Probab=23.27 E-value=6.3e+02 Score=26.01 Aligned_cols=55 Identities=24% Similarity=0.330 Sum_probs=27.5
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC----C--CCHHHHHHHHHhcCceEEEEeC
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----G--FSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~----~--~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+++||.|++-.|.-..+ .-++...|+.+++++. + ...+.+...++. +++++++..
T Consensus 110 ~~~gd~vlv~~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~ 170 (384)
T PRK06348 110 LDPGDEVIIHEPYFTPY---KDQIEMVGGKPIILETYEEDGFQINVKKLEALITS-KTKAIILNS 170 (384)
T ss_pred cCCCCEEEEeCCCCcch---HHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc-CccEEEEeC
Confidence 35677776655543332 2233445655555431 2 345666665542 456665543
No 321
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=23.12 E-value=1.8e+02 Score=30.48 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHC--CCCCCCEEEEEccCC-hHHHHHHH-HHHHhCCEEEec
Q 006776 91 LLQQVCQLANYLKDI--GVKKGDAVIIYLPML-MELPIAML-ACARIGAVHSVV 140 (631)
Q Consensus 91 L~~~v~~~A~~L~~~--Gv~~gd~V~i~~~n~-~~~~v~~l-A~~~~G~v~v~l 140 (631)
+..+..++|..|.+. +|++|+.|.|-.+-. .+++-++. ++.++||-++.+
T Consensus 3 ~~~~l~kyA~llV~~glnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA~~v~v 56 (398)
T PF02073_consen 3 FDERLEKYAELLVKYGLNVQPGQKVLIRAPVEAAPLARALVEEAYEAGAKYVIV 56 (398)
T ss_dssp HHHHHHHHHHHHHHTTT---TT-EEEEEEETT-HHHHHHHHHHHHHTT-SCEEE
T ss_pred chHHHHHHHHHHHHhccCCCCCCEEEEEecccHHHHHHHHHHHHHHcCCCceEE
Confidence 467788999998764 679999999999744 44444443 788899844433
No 322
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=23.07 E-value=6.5e+02 Score=23.85 Aligned_cols=64 Identities=16% Similarity=0.065 Sum_probs=44.0
Q ss_pred HHHCCCCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 102 LKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 102 L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+.|..++..|.... .+-....+.++|...|..++.+-|.-.+..-..+++..+++++.+...
T Consensus 42 a~~~g~~~~~~vv~~s-sGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 42 AEEEGKLPKGVIIEST-GGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred HHHcCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3444433456555543 355666667778889977777766666777778899999999988765
No 323
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=22.92 E-value=2.5e+02 Score=21.77 Aligned_cols=20 Identities=20% Similarity=0.145 Sum_probs=15.8
Q ss_pred CcCCCcCCCceEEeCCCCcc
Q 006776 420 SATFPFFGVQPVIVDEKGVE 439 (631)
Q Consensus 420 ~~G~p~~~~~~~i~d~~g~~ 439 (631)
..|.|+++.-++++|.+|+-
T Consensus 16 ~~G~Pv~gAyVRLLD~sgEF 35 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLDSSGEF 35 (85)
T ss_pred cCCcCCCCeEEEEEcCCCCe
Confidence 35778999999999987654
No 324
>PLN02242 methionine gamma-lyase
Probab=22.90 E-value=5.8e+02 Score=26.85 Aligned_cols=71 Identities=13% Similarity=0.135 Sum_probs=40.1
Q ss_pred CCCCCEEEEEccCChHHHHHHHH---HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLA---CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA---~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+..+- ......++. .-..|+.+..++.. ..+.+...++..+.++|++..-....+...++..+
T Consensus 112 ~~~GD~Vl~~~~~-Y~~~~~~~~~~~~~~~G~~~~~~d~~-d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I 185 (418)
T PLN02242 112 CSSGGHVVASNTL-YGGTHALLAHFLPRKCNITTTFVDIT-DLEAVKKAVVPGKTKVLYFESISNPTLTVADIPEL 185 (418)
T ss_pred hCCCCEEEEcCCc-HHHHHHHHHHhhhhccCceEEEcCCC-CHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHH
Confidence 5789988755442 211111111 12368777666553 67778777755457888877554444555555443
No 325
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=22.33 E-value=6.8e+02 Score=25.66 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=41.7
Q ss_pred CCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+-.+......-.+ -.+.+.|+.+..++.. ..+.+...++. +.++|++.......+...++..+
T Consensus 76 ~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i 147 (369)
T cd00614 76 LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-DPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAI 147 (369)
T ss_pred cCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC-CHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHH
Confidence 578998766554332222111 1244678777767654 46777777754 67888876554444555565443
No 326
>PRK08114 cystathionine beta-lyase; Provisional
Probab=22.33 E-value=8.2e+02 Score=25.51 Aligned_cols=75 Identities=17% Similarity=0.141 Sum_probs=45.2
Q ss_pred CCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAA 183 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 183 (631)
+++||+|.+....-..+...+ .-+-+.|.-+..+++ ...+.+...|+. +.++|++.......++..++..+.+.+
T Consensus 98 l~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia 173 (395)
T PRK08114 98 VEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP-LIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAV 173 (395)
T ss_pred cCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-CCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHH
Confidence 688998776543322222222 224557877666665 346777777754 567888776665556666766555444
No 327
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=22.17 E-value=5.2e+02 Score=22.39 Aligned_cols=58 Identities=14% Similarity=0.097 Sum_probs=39.8
Q ss_pred CCCCCEEEEEc-cCCh-HHHHHHHHHHHhCCEEEecCCCC-------CHHHHHHHHHhcCceEEEEeC
Q 006776 107 VKKGDAVIIYL-PMLM-ELPIAMLACARIGAVHSVVFAGF-------SSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 107 v~~gd~V~i~~-~n~~-~~~v~~lA~~~~G~v~v~l~~~~-------~~~~l~~~l~~~~~~~ii~~~ 165 (631)
.-+|..|+++. .+|. .-+..-.|+.++|+.++.+++.. +.+.....|... +++|++-.
T Consensus 36 ~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~-~D~iv~R~ 102 (142)
T PF02729_consen 36 LLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY-VDAIVIRH 102 (142)
T ss_dssp TTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-CSEEEEEE
T ss_pred cCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-hheEEEEe
Confidence 44677777666 4554 44555678999999999988543 456677788888 77777653
No 328
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=22.07 E-value=6.8e+02 Score=25.77 Aligned_cols=66 Identities=18% Similarity=0.206 Sum_probs=36.4
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC----CCCHHHHHHHHHhcCceEEEEeCCcccCCcccc
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIH 175 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~----~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 175 (631)
+++||.|++..|.-.. ....+...|+.++.++. ....+.+...++..++++++.+......+...+
T Consensus 124 ~~~gd~Vlv~~P~y~~---y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~ 193 (380)
T PLN03026 124 LDPGDKIIDCPPTFGM---YVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIIS 193 (380)
T ss_pred cCCCCEEEEcCCChHH---HHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Confidence 4577877777665322 22334456766555532 234566666665556777776654444444444
No 329
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=22.02 E-value=7.6e+02 Score=30.44 Aligned_cols=97 Identities=8% Similarity=0.008 Sum_probs=67.0
Q ss_pred CCCeeEEEEEcCC-CC--ceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCChHHH-HHHHHHHHhCCEEEecCC
Q 006776 67 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP-IAMLACARIGAVHSVVFA 142 (631)
Q Consensus 67 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~-v~~lA~~~~G~v~v~l~~ 142 (631)
.++.+|++..... .| ....+|.+.+...+.. .....+++++|++...+|-+.+.- .-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLW---MQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHH---HHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 4567776644321 11 2456888877554433 334568999999999988765443 346777889998887665
Q ss_pred --CCCHHHHHHHHHhcCceEEEEeCC
Q 006776 143 --GFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 143 --~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
...++.+...+++.++.++.....
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps 698 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPS 698 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHH
Confidence 357888999999999999877654
No 330
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=21.78 E-value=75 Score=21.44 Aligned_cols=24 Identities=13% Similarity=0.183 Sum_probs=20.6
Q ss_pred eEEEEccCCCCHhHHHHHHHHhCC
Q 006776 365 RVLGSVGEPINPSAWRWFFNVVGD 388 (631)
Q Consensus 365 r~v~~~Ge~l~~~~~~~~~~~~~~ 388 (631)
+.+.++|.||+.+..+.++..||.
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~ 45 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGK 45 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhh
Confidence 568899999999999999888873
No 331
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=21.55 E-value=4.5e+02 Score=27.16 Aligned_cols=72 Identities=21% Similarity=0.145 Sum_probs=39.7
Q ss_pred CCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCCC-----CCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+.-+........+ -++-+.|+.+..+..+ ...+.+...+.. +.++++.+......+...++..+
T Consensus 101 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~tG~~~~~~~i 178 (397)
T TIGR01976 101 WGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSP-RTRLVAVTAASNTLGSIVDLAAI 178 (397)
T ss_pred CCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCC-CceEEEEeCCCCCCCccCCHHHH
Confidence 578998776554443333333 3455678765544322 356777776653 45666665544444555554443
No 332
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=21.43 E-value=1.4e+02 Score=31.56 Aligned_cols=89 Identities=15% Similarity=0.263 Sum_probs=60.7
Q ss_pred CeeEEEEEcCCCCceeeecHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccC-ChHHHHHHHHHHHhCCEEEecCCCCCHH
Q 006776 69 DKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM-LMELPIAMLACARIGAVHSVVFAGFSSD 147 (631)
Q Consensus 69 ~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~gd~V~i~~~n-~~~~~v~~lA~~~~G~v~v~l~~~~~~~ 147 (631)
..+++++.++ ..+-|.+ +++.+.-.|..+.-.|..--|. +...+.+=+-=+..-++++|++.++.-.
T Consensus 389 rqpcvvf~~H-----~SlRfgd-------v~h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfq 456 (653)
T KOG1138|consen 389 RQPCVVFMGH-----PSLRFGD-------VVHFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQ 456 (653)
T ss_pred ccceeEecCC-----cchhhhH-------HHHHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHH
Confidence 4566666532 2344443 3556666777766666666663 3333333333445668899999999999
Q ss_pred HHHHHHHhcCceEEEEeCCccc
Q 006776 148 SLAQRIMDCKPKVVITSNAVKR 169 (631)
Q Consensus 148 ~l~~~l~~~~~~~ii~~~~~~~ 169 (631)
.+..+++..+|+++++.+++.+
T Consensus 457 ql~kLlkelqPk~vlcpeaytq 478 (653)
T KOG1138|consen 457 QLPKLLKELQPKIVLCPEAYTQ 478 (653)
T ss_pred HHHHHHHHhCCCEEEChhhhcC
Confidence 9999999999999999887754
No 333
>PRK03321 putative aminotransferase; Provisional
Probab=21.34 E-value=7e+02 Score=25.17 Aligned_cols=66 Identities=18% Similarity=0.191 Sum_probs=37.7
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCC----CCHHHHHHHHHhcCceEEEEeCCcccCCccccc
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG----FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHL 176 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 176 (631)
+++||.|++-.|.-.. ...++...|+.++.++.+ ...+.+...++. ++++++.+......+...+.
T Consensus 95 ~~~gd~Vli~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~ 164 (352)
T PRK03321 95 AGPGDEVIFAWRSFEA---YPILVQVAGATPVQVPLTPDHTHDLDAMAAAITD-RTRLIFVCNPNNPTGTVVTP 164 (352)
T ss_pred cCCCCEEEeCCCCHHH---HHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc-CCCEEEEeCCCCCcCCCcCH
Confidence 5789988875543222 233455678766555432 456677666654 67777665444444444444
No 334
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=21.23 E-value=4.6e+02 Score=25.57 Aligned_cols=55 Identities=15% Similarity=0.054 Sum_probs=42.0
Q ss_pred CCCCEEEEEccCChHHHHHHHHHHHhCCEE--EecCCCCCHHHHHHHHHhcCceEEE
Q 006776 108 KKGDAVIIYLPMLMELPIAMLACARIGAVH--SVVFAGFSSDSLAQRIMDCKPKVVI 162 (631)
Q Consensus 108 ~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~--v~l~~~~~~~~l~~~l~~~~~~~ii 162 (631)
=+|-+|+.++.-..+..+++..+..+||-+ +.-||..+.+.+...|...+..+.-
T Consensus 41 l~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A 97 (268)
T PF05221_consen 41 LKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFA 97 (268)
T ss_dssp TTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEE
Confidence 368899999999999999999999999854 4567888889999999888876543
No 335
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=21.19 E-value=1.6e+02 Score=22.74 Aligned_cols=47 Identities=23% Similarity=0.365 Sum_probs=24.2
Q ss_pred eeEEEEEcCCCCceeeecHHHHHH-HHHHHHHHHHHCCCCCCCEEEEEccCC
Q 006776 70 KVAIYWEANDPGVDATLTYSQLLQ-QVCQLANYLKDIGVKKGDAVIIYLPML 120 (631)
Q Consensus 70 ~~A~~~~~~~~~~~~~~Ty~eL~~-~v~~~A~~L~~~Gv~~gd~V~i~~~n~ 120 (631)
-+|++|+..--|-.-.++=.|+.+ +..+++..|++.|++ |-+-..+|
T Consensus 15 ~I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~----v~L~~~~S 62 (86)
T PF09153_consen 15 WIAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS----VSLDEEPS 62 (86)
T ss_dssp EEEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EEEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce----eEEeecCC
Confidence 467777642101112233367777 999999999998765 55555444
No 336
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=21.16 E-value=9.6e+02 Score=25.06 Aligned_cols=74 Identities=15% Similarity=0.040 Sum_probs=32.7
Q ss_pred CCCCCEEEEEccCChHHHHHHHHH-HHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLAC-ARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVD 181 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~-~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 181 (631)
+++||+|.+...---.....+-.. -+.|.-+..+++....+....+.. -+.++|++..-.....+..++..+.+
T Consensus 99 l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~-~~tk~v~lEtPsNP~l~v~DI~~i~~ 173 (396)
T COG0626 99 LKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKE-PNTKLVFLETPSNPLLEVPDIPAIAR 173 (396)
T ss_pred cCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcc-cCceEEEEeCCCCcccccccHHHHHH
Confidence 455777666554111111111122 234444444555443333333332 45666766655444445555544433
No 337
>PRK07671 cystathionine beta-lyase; Provisional
Probab=20.98 E-value=4.3e+02 Score=27.35 Aligned_cols=71 Identities=20% Similarity=0.189 Sum_probs=40.7
Q ss_pred CCCCCEEEEEccCChHHHHHHH-HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPMLMELPIAML-ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||+|.+..+.-......+. .+.+.|+.++.++. ...+.+...+.. +.++|+++......+...++..+
T Consensus 85 l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~-~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I 156 (377)
T PRK07671 85 FSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT-SNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKI 156 (377)
T ss_pred hCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC-CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHH
Confidence 4789998766653332322222 34567888777764 456777776653 56777765544333444454443
No 338
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=20.84 E-value=8e+02 Score=24.88 Aligned_cols=68 Identities=18% Similarity=0.145 Sum_probs=40.3
Q ss_pred CCCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCC------CCCHHHHHHHHHh------cCceEEEEeCCcccCCccc
Q 006776 107 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA------GFSSDSLAQRIMD------CKPKVVITSNAVKRGPKAI 174 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~------~~~~~~l~~~l~~------~~~~~ii~~~~~~~~~~~~ 174 (631)
+++||.|.+--+.... .+.++...|+.++.++. ....+.+...++. -++++++.+......+...
T Consensus 80 ~~~gd~Vl~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~ 156 (361)
T cd06452 80 CEKGDWVVVDGLAHYT---SYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH 156 (361)
T ss_pred cCCCCEEEEcCCcchH---HHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec
Confidence 5789987775333222 23467778887766543 3467888877763 2577777765433333433
Q ss_pred ccH
Q 006776 175 HLK 177 (631)
Q Consensus 175 ~~~ 177 (631)
++.
T Consensus 157 ~~~ 159 (361)
T cd06452 157 DAK 159 (361)
T ss_pred cHH
Confidence 443
No 339
>PRK06460 hypothetical protein; Provisional
Probab=20.77 E-value=9.1e+02 Score=24.86 Aligned_cols=71 Identities=14% Similarity=0.184 Sum_probs=40.9
Q ss_pred CCCCCEEEEEccCC-hHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCCcccCCcccccHHH
Q 006776 107 VKKGDAVIIYLPML-MELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 179 (631)
Q Consensus 107 v~~gd~V~i~~~n~-~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 179 (631)
+++||.|.+..+.- +-+....-++.+.|+.+..++.+ ..+.+.. +..-++++|+.+......+...++..+
T Consensus 81 ~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~-~~~~l~~-~~~~~tklV~l~sp~NPtG~v~d~~~I 152 (376)
T PRK06460 81 LKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG-SDNIIEK-AKSKRYDVVFVENITNPLLRVVDITEL 152 (376)
T ss_pred hCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC-CHHHHHH-hcCCCceEEEEECCCCCCCcccCHHHH
Confidence 67899988754432 22222233456678776666543 2333333 334467888887666556666666543
No 340
>PHA02553 6 baseplate wedge subunit; Provisional
Probab=20.55 E-value=2.5e+02 Score=30.94 Aligned_cols=64 Identities=9% Similarity=0.090 Sum_probs=45.1
Q ss_pred CceeechHHHHHHHhc-CcccceEEEEeeecCCC--CeeEEEEEEeCCCCCCcHHHHHHHHHHHHhh
Q 006776 507 SGHRIGTAEVESALVS-HPQCAEAAVVGVEHEVK--GQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ 570 (631)
Q Consensus 507 ~G~~i~~~eIE~~l~~-~~~V~~~~vv~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~ 570 (631)
.+.-|.+.+-|....+ +|+|..+.++....... -..+.+.|+++.+...+..+.++|.++|.++
T Consensus 311 ~~RAVTa~DYE~lA~~~~p~V~rA~~~~~~~~spp~~G~V~VvVvP~~g~~ls~~l~~~I~~yL~~r 377 (611)
T PHA02553 311 QRRAVTASDYEAFVSERFGSIVQAVQCGGDSLKPPVYGYVFIAVKPKSGLYLTDVQKEDIKNYLKKY 377 (611)
T ss_pred ccccccHHHHHHHHHhhCCccEEEEEccCCcCCCCCCceEEEEEecCCCCCCCHHHHHHHHHHHHhc
Confidence 3566889999998876 79999998775322211 0245566666666677788888888888775
No 341
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=20.55 E-value=9.7e+02 Score=24.91 Aligned_cols=10 Identities=30% Similarity=0.816 Sum_probs=4.3
Q ss_pred CCCEEEEEcc
Q 006776 109 KGDAVIIYLP 118 (631)
Q Consensus 109 ~gd~V~i~~~ 118 (631)
+||.|++-.|
T Consensus 127 ~gd~vlv~~P 136 (412)
T PTZ00433 127 EGDNILVPAP 136 (412)
T ss_pred CCCEEEEccC
Confidence 3444444443
No 342
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=20.52 E-value=8.2e+02 Score=26.44 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=61.3
Q ss_pred CCCeeEEEEEcCCC-C--ceeeecHHHHHHHHHHHHHHHHHCCCCCC-CEEEEEccCC--hHHHHHHHHHHHhCCEEEec
Q 006776 67 LGDKVAIYWEANDP-G--VDATLTYSQLLQQVCQLANYLKDIGVKKG-DAVIIYLPML--MELPIAMLACARIGAVHSVV 140 (631)
Q Consensus 67 ~~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~~A~~L~~~Gv~~g-d~V~i~~~n~--~~~~v~~lA~~~~G~v~v~l 140 (631)
.++.+|++...... + ....+|...+...+..+. ...++.++ |++...+|.. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMF---VAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHH---HhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 45677777553321 1 245688888866554433 34567776 8888887754 44455566778889887766
Q ss_pred CCC---CCHHHHHHHHHhcCceEEEE
Q 006776 141 FAG---FSSDSLAQRIMDCKPKVVIT 163 (631)
Q Consensus 141 ~~~---~~~~~l~~~l~~~~~~~ii~ 163 (631)
.+. ..+..+..++++.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~ 252 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAA 252 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEEC
Confidence 542 25667788999999988654
No 343
>PRK07049 methionine gamma-lyase; Validated
Probab=20.45 E-value=8.7e+02 Score=25.61 Aligned_cols=71 Identities=10% Similarity=0.178 Sum_probs=36.8
Q ss_pred CCCCCEEEEEccCChHHHHHHH-HHHHhCCEEEecCCCCCHHHHHHHHHh----cCceEEEEeCCcccCCcccccH
Q 006776 107 VKKGDAVIIYLPMLMELPIAML-ACARIGAVHSVVFAGFSSDSLAQRIMD----CKPKVVITSNAVKRGPKAIHLK 177 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~l-A~~~~G~v~v~l~~~~~~~~l~~~l~~----~~~~~ii~~~~~~~~~~~~~~~ 177 (631)
+++||.|.+..|.-..+...+. .+-+.|+.++.+......+.+...+.. -++++|+...-....+...+..
T Consensus 119 ~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~ 194 (427)
T PRK07049 119 VRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVA 194 (427)
T ss_pred hCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHH
Confidence 4678877665543333322211 134467655555444445666655542 3567777765544445555543
No 344
>PLN02494 adenosylhomocysteinase
Probab=20.39 E-value=5.3e+02 Score=27.64 Aligned_cols=57 Identities=18% Similarity=0.084 Sum_probs=48.6
Q ss_pred CCCCCCEEEEEccCChHHHHHHHHHHHhCC--EEEecCCCCCHHHHHHHHHhcCceEEE
Q 006776 106 GVKKGDAVIIYLPMLMELPIAMLACARIGA--VHSVVFAGFSSDSLAQRIMDCKPKVVI 162 (631)
Q Consensus 106 Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~--v~v~l~~~~~~~~l~~~l~~~~~~~ii 162 (631)
.-=+|-+|+.++.-.++..+++..+...|| .++..||..+.+.+...|...+..+.-
T Consensus 42 ~pl~G~~i~~~lHl~~kTa~L~~tL~~~GA~v~~~~~Np~sTqd~vaaal~~~gi~vfa 100 (477)
T PLN02494 42 QPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFA 100 (477)
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhCCceEEE
Confidence 334699999999999999999999999998 566778888999999999988877543
No 345
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=20.33 E-value=7.4e+02 Score=24.33 Aligned_cols=64 Identities=17% Similarity=0.114 Sum_probs=46.1
Q ss_pred HHHCCC-CCCCEEEEEccCChHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeCC
Q 006776 102 LKDIGV-KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 166 (631)
Q Consensus 102 L~~~Gv-~~gd~V~i~~~n~~~~~v~~lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 166 (631)
+.+.|. ++|+.|.. ...+-....+-++|.+.|.-++.+-|.-.+......++..+++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 344553 35666654 55566677777888899987777766655566678999999999998765
No 346
>PRK05968 hypothetical protein; Provisional
Probab=20.26 E-value=8.6e+02 Score=25.21 Aligned_cols=56 Identities=14% Similarity=0.177 Sum_probs=35.1
Q ss_pred CCCCCEEEEEccCChHHHHHH-HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEEeC
Q 006776 107 VKKGDAVIIYLPMLMELPIAM-LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 165 (631)
Q Consensus 107 v~~gd~V~i~~~n~~~~~v~~-lA~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 165 (631)
+++||.|.+..+........+ -.+.+.|+.+..++.. ..+.+...+. +.++|+...
T Consensus 99 ~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~--~tklV~ie~ 155 (389)
T PRK05968 99 VEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR-DEEAVAKALP--GAKLLYLES 155 (389)
T ss_pred hCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC-CHHHHHHhcc--cCCEEEEEC
Confidence 578999877665433322222 2455678887777654 6677777763 467777654
No 347
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=20.10 E-value=9.7e+02 Score=24.73 Aligned_cols=11 Identities=18% Similarity=0.573 Sum_probs=5.7
Q ss_pred CCCCEEEEEcc
Q 006776 108 KKGDAVIIYLP 118 (631)
Q Consensus 108 ~~gd~V~i~~~ 118 (631)
++||.|++-.|
T Consensus 117 ~~gd~v~i~~P 127 (401)
T TIGR01264 117 NAGQNILVPRP 127 (401)
T ss_pred CCCCEEEEeCC
Confidence 35555555544
No 348
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=20.08 E-value=6e+02 Score=26.69 Aligned_cols=36 Identities=11% Similarity=0.006 Sum_probs=24.6
Q ss_pred HHHHHhhhcCceEEEecCCCCCCChhHHHHHHHHhC
Q 006776 299 YVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 334 (631)
Q Consensus 299 ~~~~~~l~~G~~~vl~~~~~~~~~~~~~~~~i~~~~ 334 (631)
..+..+|..|.++++-.+.........+.+++.+..
T Consensus 115 ~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag 150 (432)
T cd07078 115 WKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAG 150 (432)
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcC
Confidence 456788999999888765433334566777777755
No 349
>PF04865 Baseplate_J: Baseplate J-like protein; InterPro: IPR006949 The temperate bacteriophage P2 has four defined tail genes: V, J, W and I. Their order is the late gene promoter, VWJI, followed by the tail fibre genes H and G and then a transcription terminator. BAP V protein is the small spike at the tip of the tail and basal plate assembly protein J lies at the edge of the baseplate []. This family also includes a number of bacterial homologues, which are thought to have been horizontally transferred.
Probab=20.02 E-value=1.9e+02 Score=27.70 Aligned_cols=56 Identities=20% Similarity=0.131 Sum_probs=39.2
Q ss_pred eeechHHHHHHHhcC-cccceEEEEeeecCCCCeeEEEEEEeCCCCCCcHHHHHHHHHHH
Q 006776 509 HRIGTAEVESALVSH-PQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAV 567 (631)
Q Consensus 509 ~~i~~~eIE~~l~~~-~~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~ 567 (631)
.-.....++...++. |+|.++.++.... ..| .+.++|....+ ..++++.++++++|
T Consensus 117 ~~gt~~dy~~~a~~~~~gV~~v~v~~~~~-~~G-~V~v~v~~~~g-~~~~~l~~~V~~~i 173 (243)
T PF04865_consen 117 RAGTADDYEYWALSVSPGVADVKVYPNWN-GPG-TVDVYVLGANG-APSQELLAAVQAYI 173 (243)
T ss_pred cCCCHHHHHHHHHHhCCCceEEEEecCCC-CCC-EEEEEEccCCC-CCCHHHHHHHHHHh
Confidence 345778899888887 9999999986533 123 24455555444 56778888888888
Done!